Pregenerated sensors for POLR3F (Homo sapiens)
Ensembl gene IDs: ENSG00000132664Ensembl transcript IDs: ENST00000377603.5, ENST00000461589.1, ENST00000462997.5, ENST00000475192.1, ENST00000489753.1, ENST00000497333.5
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTGTCTTCTCCCTTTCACATGGCAGAAGGGGTGATGGAGCTCTCTaGGTCTCTTTATATAAGGGCACTAATCCCATTCATGAGCGCTGT | + |
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Preference number: 1 (lower is better) Translates to: FVFSLSHGRRGDGAL*VSLYKGTNPIHERC Trigger: ACAGCGCTCATGAATGGGATTAGTGCCCTTATATAAAGAGACCCAGAGAGCTCCATCACCCCTTCTGCCATGTGAAAGGGAGAAGACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| 3UTR GCA 90 bp | ATTTATTTCTCACAATTCTGGAGGCTGAGAAGTCCAAGATCAAGGTaGTTACAGATTTGTTTTCTGGTGAGGACCCACTTCCTGGTTCGT | + |
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Preference number: 1 (lower is better) Translates to: IYFSQFWRLRSPRSR*LQICFLVRTHFLVR Trigger: ACGAACCAGGAAGTGGGTCCTCACCAGAAAACAAATCTGTAAGCACCTTGATCTTGGACTTCTCAGCCTCCAGAATTGTGAGAAATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| 3UTR CAA 90 bp | ACAATTCTGGAGGCTGAGAAGTCCAAGATCAAGGTGCTTACAGATTaGTTTTCTGGTGAGGACCCACTTCCTGGTTCGTGGATGTTTGTC | + |
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Preference number: 2 (lower is better) Translates to: TILEAEKSKIKVLTD*FSGEDPLPGSWMFV Trigger: GACAAACATCCACGAACCAGGAAGTGGGTCCTCACCAGAAAACAAATCTGTAAGCACCTTGATCTTGGACTTCTCAGCCTCCAGAATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTTATATAAGGGCACTAATCCCATTCATGAGCGCTGTTACTCTCCTGACCGTCATACCCCAAGTTTaGACTCTTTGCTATTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SLYIRALIPFMSAVTLLTVIPQV*TLCYSC Trigger: GCAGGAATAGCAAAGAGTGCAAACTTGGGGTATGAC...GGTCAGGAGAGTAACAGCGCTCATGAATGGGATTAGTGCCCTTATATAAAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| 3UTR-3UTR TCA 90 bp | AATTTATTTCTCACAATTCTGGAGGCTGAGAAGTCCAAGATCAAGGTGCTTACAGCGCTGTTACTCTCCTaGCCTATCACTTACCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: NLFLTILEAEKSKIKVLTALLLS*PITYQK Trigger: CTTTTGGTAAGTGATAGGTCAGGAGAGTAACAGCGC...TGTAAGCACCTTGATCTTGGACTTCTCAGCCTCCAGAATTGTGAGAAATAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| 3UTR-3UTR GCA 90 bp | GAGGCTGAGAAGTCCAAGATCAAGGTGCTTACAGATTTGTTTTCTGGTGAGGACAAGGAATTAATATTGTaGGGAAAAGGCATGTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: EAEKSKIKVLTDLFSGEDKELIL*GKGMFH Trigger: GTGGAACATGCCTTTTCCGCACAATATTAATTCCTT...GTCCTCACCAGAAAACAAATCTGTAAGCACCTTGATCTTGGACTTCTCAGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTTATATAAGGGCACTAATCCCATTCATGAGCGCTGTTACTCTCCTGACCTTTCGTGTTCCATCATaGATTAAATTATCTGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: SLYIRALIPFMSAVTLLTFRVPS*IKLSAP Trigger: GGGAGCAGATAATTTAATTCATGATGGAACACGAAA...GGTCAGGAGAGTAACAGCGCTCATGAATGGGATTAGTGCCCTTATATAAAGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTTATATAAGGGCACTAATCCCATTCATGAGCGCTGTTACTCTCCTGACCAGTAGTCATTGGGTTTaGAGTAAGTATGGTAGCATA | + |
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Preference number: 2 (lower is better) Translates to: SLYIRALIPFMSAVTLLTSSHWV*SKYGSI Trigger: TATGCTACCATACTTACTTCAAACCCAATGACTACT...GGTCAGGAGAGTAACAGCGCTCATGAATGGGATTAGTGCCCTTATATAAAGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| 3UTR-3UTR GCA 90 bp | ACAGAAATTTATTTCTCACAATTCTGGAGGCTGAGAAGTCCAAGATCAAGGTGCCATTATTGTGAAGTTTaGTTTCAAGGAGATTTCGTG | + |
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Preference number: 2 (lower is better) Translates to: TEIYFSQFWRLRSPRSRCHYCEV*FQGDFV Trigger: CACGAAATCTCCTTGAAAGCAAACTTCACAATAATG...GCACCTTGATCTTGGACTTCTCAGCCTCCAGAATTGTGAGAAATAAATTTCTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| 3UTR-3UTR CAA 90 bp | CTCTGGGTCTCTTTATATAAGGGCACTAATCCCATTCATGAGCGCTGTTACTCTGACCCATCAGAAGTCTaGAAAGATGTGGTCCTCCGG | + |
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Preference number: 3 (lower is better) Translates to: LWVSLYKGTNPIHERCYSDPSEV*KDVVLR Trigger: CCGGAGGACCACATCTTTCAAGACTTCTGATGGGTC...AGAGTAACAGCGCTCATGAATGGGATTAGTGCCCTTATATAAAGAGACCCAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| 3UTR-3UTR CAA 90 bp | TCGTGGATGTTTGTCTTCTCCCTTTCACATGGCAGAAGGGGTGATGGAGCTCTCGTAAATACGGGTATGTaGGCATCTTTTTCCTTGACC | + |
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Preference number: 3 (lower is better) Translates to: SWMFVFSLSHGRRGDGALVNTGM*ASFSLT Trigger: GGTCAAGGAAAAAGATGCCAACATACCCGTATTTAC...GAGAGCTCCATCACCCCTTCTGCCATGTGAAAGGGAGAAGACAAACATCCACGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| 3UTR TCA 72 bp | GTCCAAGATCAAGGTGCTTACAGATTTGTTTTCTGGTaGGGACCCACTTCCTGGTTCGTGGATGTTTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: VQDQGAYRFVFW*GPTSWFVDVCL Trigger: AAGACAAACATCCACGAACCAGGAAGTGGGTCCTCACCAGAAAACAAATCTGTAAGCACCTTGATCTTGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| 3UTR GCA 72 bp | TCACAATTCTGGAGGCTGAGAAGTCCAAGATCAAGGTaGTTACAGATTTGTTTTCTGGTGAGGACCCACTTC | + |
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Preference number: 3 (lower is better) Translates to: SQFWRLRSPRSR*LQICFLVRTHF Trigger: GAAGTGGGTCCTCACCAGAAAACAAATCTGTAAGCACCTTGATCTTGGACTTCTCAGCCTCCAGAATTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| 3UTR-3UTR CAA 90 bp | ACAGAAATTTATTTCTCACAATTCTGGAGGCTGAGAAGTCCAAGATCAAGGTGCCCAAGTTTGCACTCTTaGCTATTCCTGCCTTTAACC | + |
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Preference number: 3 (lower is better) Translates to: TEIYFSQFWRLRSPRSRCPSLHS*LFLPLT Trigger: GGTTAAAGGCAGGAATAGCAAAGAGTGCAAACTTGG...GCACCTTGATCTTGGACTTCTCAGCCTCCAGAATTGTGAGAAATAAATTTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| 3UTR-3UTR CAA 90 bp | ACAGAAATTTATTTCTCACAATTCTGGAGGCTGAGAAGTCCAAGATCAAGGTGCAGTCATACCCCAAGTTaGCACTCTTTGCTATTCCTG | + |
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Preference number: 3 (lower is better) Translates to: TEIYFSQFWRLRSPRSRCSHTPS*HSLLFL Trigger: CAGGAATAGCAAAGAGTGCAAACTTGGGGTATGACT...GCACCTTGATCTTGGACTTCTCAGCCTCCAGAATTGTGAGAAATAAATTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| 3UTR CCA 72 bp | GGTTTATCAACAACAGAAATTTATTTCTCACAATTCTaGAGGCTGAGAAGTCCAAGATCAAGGTGCTTACAG | + |
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Preference number: 3 (lower is better) Translates to: GLSTTEIYFSQF*RLRSPRSRCLQ Trigger: CTGTAAGCACCTTGATCTTGGACTTCTCAGCCTCCAGAATTGTGAGAAATAAATTTCTGTTGTTGATAAACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| 3UTR-3UTR CAA 90 bp | ATTGGAAATGAGATTTCAACATTAGAATTCTGGGGGCACACAAACATTCAGTCTACTGAAAATATGTCCTaGACAGTAGTCATTGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: IGNEISTLEFWGHTNIQSTENMS*TVVIGF Trigger: AAACCCAATGACTACTGTCAAGGACATATTTTCAGT...AGACTGAATGTTTGTGTGCCCCCAGAATTCTAATGTTGAAATCTCATTTCCAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR GCA 90 bp | CCACTCTCCCCCAGTCATACCCCAAGTTTGCACTCTTTGCTATTCCTGCCTTTAGCAGAGTCCACAGGGTaGCCGGACCAAACCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PLSPSHTPSLHSLLFLPLAESTG*PDQTCG Trigger: CCCACAGGTTTGGTCCGGGCACCCTGTGGACTCTGC...TAAAGGCAGGAATAGCAAAGAGTGCAAACTTGGGGTATGACTGGGGGAGAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR GCA 90 bp | TCTCTTTATATAAGGGCACTAATCCCATTCATGAGCGCTGTTACTCTCCTGACCTCCGCGTCAGGCGGCTaGACCTTCACCTTCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: SLYIRALIPFMSAVTLLTSASGG*TFTFTS Trigger: GGAGGTGAAGGTGAAGGTGCAGCCGCCTGACGCGGA...GGTCAGGAGAGTAACAGCGCTCATGAATGGGATTAGTGCCCTTATATAAAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| 3UTR CAA 72 bp | TTTCTGGTGAGGACCCACTTCCTGGTTCGTGGATGTTaGTCTTCTCCCTTTCACATGGCAGAAGGGGTGATG | + |
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Preference number: 4 (lower is better) Translates to: FLVRTHFLVRGC*SSPFHMAEGVM Trigger: CATCACCCCTTCTGCCATGTGAAAGGGAGAAGACAAACATCCACGAACCAGGAAGTGGGTCCTCACCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR TCA 90 bp | TCTCTTTATATAAGGGCACTAATCCCATTCATGAGCGCTGTTACTCTCCTGACCACATGGCAGAAGGGGTaGTGGAGCTCTCTGGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: SLYIRALIPFMSAVTLLTTWQKG*WSSLGL Trigger: GAGACCCAGAGAGCTCCATCACCCCTTCTGCCATGT...GGTCAGGAGAGTAACAGCGCTCATGAATGGGATTAGTGCCCTTATATAAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR CCA 90 bp | CCACTCTCCCCCAGTCATACCCCAAGTTTGCACTCTTTGCTATTCCTGCCTTTAAGTCACAGACCGGTCTaGCTGCAGGTTATAGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: PLSPSHTPSLHSLLFLPLSHRPV*LQVIEH Trigger: ATGCTCTATAACCTGCAGCCAGACCGGTCTGTGACT...TAAAGGCAGGAATAGCAAAGAGTGCAAACTTGGGGTATGACTGGGGGAGAGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| 3UTR CAA 72 bp | GAGGCTGAGAAGTCCAAGATCAAGGTGCTTACAGATTaGTTTTCTGGTGAGGACCCACTTCCTGGTTCGTGG | + |
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Preference number: 4 (lower is better) Translates to: EAEKSKIKVLTD*FSGEDPLPGSW Trigger: CCACGAACCAGGAAGTGGGTCCTCACCAGAAAACAAATCTGTAAGCACCTTGATCTTGGACTTCTCAGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR TCA 90 bp | AATTTATTTCTCACAATTCTGGAGGCTGAGAAGTCCAAGATCAAGGTGCTTACAAGGATAGCGCTCTGCTaGGGCCGAGGGGCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: NLFLTILEAEKSKIKVLTRIALC*GRGAFF Trigger: GAAGAAGGCCCCTCGGCCTCAGCAGAGCGCTATCCT...TGTAAGCACCTTGATCTTGGACTTCTCAGCCTCCAGAATTGTGAGAAATAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR CCA 90 bp | GAGGCTGAGAAGTCCAAGATCAAGGTGCTTACAGATTTGTTTTCTGGTGAGGACTGTGGGAGGGATGATTaGATTGACTGCCCTGTACAG | + |
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Preference number: 4 (lower is better) Translates to: EAEKSKIKVLTDLFSGEDCGRDD*IDCPVQ Trigger: CTGTACAGGGCAGTCAATCCAATCATCCCTCCCACA...GTCCTCACCAGAAAACAAATCTGTAAGCACCTTGATCTTGGACTTCTCAGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR CCA 90 bp | ATTGGAAATGAGATTTCAACATTAGAATTCTGGGGGCACACAAACATTCAGTCTGCAGTTCCTGACGCCTaGGGGGAAAGATGCACGGAG | + |
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Preference number: 4 (lower is better) Translates to: IGNEISTLEFWGHTNIQSAVPDA*GERCTE Trigger: CTCCGTGCATCTTTCCCCCCAGGCGTCAGGAACTGC...AGACTGAATGTTTGTGTGCCCCCAGAATTCTAATGTTGAAATCTCATTTCCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR CCA 90 bp | CTCTGGGTCTCTTTATATAAGGGCACTAATCCCATTCATGAGCGCTGTTACTCTATCTCACCACCTTCGTaGCAGTCATCAAAAACCGGG | + |
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Preference number: 4 (lower is better) Translates to: LWVSLYKGTNPIHERCYSISPPS*QSSKTG Trigger: CCCGGTTTTTGATGACTGCCACGAAGGTGGTGAGAT...AGAGTAACAGCGCTCATGAATGGGATTAGTGCCCTTATATAAAGAGACCCAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR TCA 90 bp | GAGGCTGAGAAGTCCAAGATCAAGGTGCTTACAGATTTGTTTTCTGGTGAGGACGAATTACTTGGTCTGTaGTTCCATGAGGGAACTGGT | + |
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Preference number: 4 (lower is better) Translates to: EAEKSKIKVLTDLFSGEDELLGL*FHEGTG Trigger: ACCAGTTCCCTCATGGAATCACAGACCAAGTAATTC...GTCCTCACCAGAAAACAAATCTGTAAGCACCTTGATCTTGGACTTCTCAGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR TCA 90 bp | CTCTGGGTCTCTTTATATAAGGGCACTAATCCCATTCATGAGCGCTGTTACTCTAGATTTGTTTTCTGGTaGGGACCCACTTCCTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: LWVSLYKGTNPIHERCYSRFVFW*GPTSWF Trigger: GAACCAGGAAGTGGGTCCTCACCAGAAAACAAATCT...AGAGTAACAGCGCTCATGAATGGGATTAGTGCCCTTATATAAAGAGACCCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR TCA 90 bp | GAGGCTGAGAAGTCCAAGATCAAGGTGCTTACAGATTTGTTTTCTGGTGAGGACAATACAGTTAGATGGTaGAATCTCACCACCTTCGTG | + |
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Preference number: 4 (lower is better) Translates to: EAEKSKIKVLTDLFSGEDNTVRW*NLTTFV Trigger: CACGAAGGTGGTGAGATTTCACCATCTAACTGTATT...GTCCTCACCAGAAAACAAATCTGTAAGCACCTTGATCTTGGACTTCTCAGCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR TCA 90 bp | GAGGCTGAGAAGTCCAAGATCAAGGTGCTTACAGATTTGTTTTCTGGTGAGGACTGGCATCTTTTTCCTTaGCCCATCAGAAGTCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: EAEKSKIKVLTDLFSGEDWHLFP*PIRSLE Trigger: TTCAAGACTTCTGATGGGTCAAGGAAAAAGATGCCA...GTCCTCACCAGAAAACAAATCTGTAAGCACCTTGATCTTGGACTTCTCAGCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR CCA 90 bp | CTCTGGGTCTCTTTATATAAGGGCACTAATCCCATTCATGAGCGCTGTTACTCTTCAGATTCAAAATCCTaGTCACTGTACCAGGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LWVSLYKGTNPIHERCYSSDSKS*SLYQAP Trigger: TGGAGCCTGGTACAGTGACCAGGATTTTGAATCTGA...AGAGTAACAGCGCTCATGAATGGGATTAGTGCCCTTATATAAAGAGACCCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR GCA 90 bp | ATTGGAAATGAGATTTCAACATTAGAATTCTGGGGGCACACAAACATTCAGTCTCCTATTGATGGCTACTaGCCGCTGCTGGGCTTCTAT | + |
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Preference number: 4 (lower is better) Translates to: IGNEISTLEFWGHTNIQSPIDGY*PLLGFY Trigger: ATAGAAGCCCAGCAGCGGGCAGTAGCCATCAATAGG...AGACTGAATGTTTGTGTGCCCCCAGAATTCTAATGTTGAAATCTCATTTCCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR GCA 90 bp | CTCTGGGTCTCTTTATATAAGGGCACTAATCCCATTCATGAGCGCTGTTACTCTTCATTGGGTTCTGTTTaGTTTCTCGTGCTGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LWVSLYKGTNPIHERCYSSLGSV*FLVLFL Trigger: CAGAAACAGCACGAGAAAGCAAACAGAACCCAATGA...AGAGTAACAGCGCTCATGAATGGGATTAGTGCCCTTATATAAAGAGACCCAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR GCA 90 bp | CTTGGTAAATACGGGTATGTTGGCATCTTTTTCCTTGACCCATCAGAAGTCTTGTGTGTCCATCTACACTaGCAACTGTGCCTTCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: LGKYGYVGIFFLDPSEVLCVHLH*QLCLLL Trigger: CAAAAGAAGGCACAGTTGGCAGTGTAGATGGACACA...CAAGACTTCTGATGGGTCAAGGAAAAAGATGCCAACATACCCGTATTTACCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR GCA 90 bp | TCTCTTTATATAAGGGCACTAATCCCATTCATGAGCGCTGTTACTCTCCTGACCGATGATTGGATTGACTaGCCTGTACAGTTTCATGTG | + |
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Preference number: 4 (lower is better) Translates to: SLYIRALIPFMSAVTLLTDDWID*PVQFHV Trigger: CACATGAAACTGTACAGGGCAGTCAATCCAATCATC...GGTCAGGAGAGTAACAGCGCTCATGAATGGGATTAGTGCCCTTATATAAAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR GCA 90 bp | CTTGGTAAATACGGGTATGTTGGCATCTTTTTCCTTGACCCATCAGAAGTCTTGGTCATACCCCAAGTTTaGACTCTTTGCTATTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LGKYGYVGIFFLDPSEVLVIPQV*TLCYSC Trigger: GCAGGAATAGCAAAGAGTGCAAACTTGGGGTATGAC...CAAGACTTCTGATGGGTCAAGGAAAAAGATGCCAACATACCCGTATTTACCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR TCA 90 bp | GAGGCTGAGAAGTCCAAGATCAAGGTGCTTACAGATTTGTTTTCTGGTGAGGACTTTCGTGTTCCATCATaGATTAAATTATCTGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: EAEKSKIKVLTDLFSGEDFRVPS*IKLSAP Trigger: GGGAGCAGATAATTTAATTCATGATGGAACACGAAA...GTCCTCACCAGAAAACAAATCTGTAAGCACCTTGATCTTGGACTTCTCAGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR TCA 90 bp | ATTGGAAATGAGATTTCAACATTAGAATTCTGGGGGCACACAAACATTCAGTCTACCCATCAGAAGTCTTaGAAGATGTGGTCCTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: IGNEISTLEFWGHTNIQSTHQKS*KMWSSG Trigger: TCCGGAGGACCACATCTTTCAAGACTTCTGATGGGT...AGACTGAATGTTTGTGTGCCCCCAGAATTCTAATGTTGAAATCTCATTTCCAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR GCA 90 bp | CTCTGGGTCTCTTTATATAAGGGCACTAATCCCATTCATGAGCGCTGTTACTCTAGTCCAAGATCAAGGTaGTTACAGATTTGTTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LWVSLYKGTNPIHERCYSSPRSR*LQICFL Trigger: CAGAAAACAAATCTGTAAGCACCTTGATCTTGGACT...AGAGTAACAGCGCTCATGAATGGGATTAGTGCCCTTATATAAAGAGACCCAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR GCA 90 bp | TCTCTTTATATAAGGGCACTAATCCCATTCATGAGCGCTGTTACTCTCCTGACCCATTATTGTGAAGTTTaGTTTCAAGGAGATTTCGTG | + |
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Preference number: 4 (lower is better) Translates to: SLYIRALIPFMSAVTLLTHYCEV*FQGDFV Trigger: CACGAAATCTCCTTGAAAGCAAACTTCACAATAATG...GGTCAGGAGAGTAACAGCGCTCATGAATGGGATTAGTGCCCTTATATAAAGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR GCA 90 bp | CTTGGTAAATACGGGTATGTTGGCATCTTTTTCCTTGACCCATCAGAAGTCTTGAAGGAATTAATATTGTaGGGAAAAGGCATGTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: LGKYGYVGIFFLDPSEVLKELIL*GKGMFH Trigger: GTGGAACATGCCTTTTCCGCACAATATTAATTCCTT...CAAGACTTCTGATGGGTCAAGGAAAAAGATGCCAACATACCCGTATTTACCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR TCA 90 bp | ACAGAAATTTATTTCTCACAATTCTGGAGGCTGAGAAGTCCAAGATCAAGGTGCATAACTCTACCTTACTaGTTCCCAATTCGCAGATAT | + |
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Preference number: 4 (lower is better) Translates to: TEIYFSQFWRLRSPRSRCITLPY*FPIRRY Trigger: ATATCTGCGAATTGGGAATCAGTAAGGTAGAGTTAT...GCACCTTGATCTTGGACTTCTCAGCCTCCAGAATTGTGAGAAATAAATTTCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR GCA 90 bp | AATTTATTTCTCACAATTCTGGAGGCTGAGAAGTCCAAGATCAAGGTGCTTACAATAAAAGGCCCGTATTaGTCCTTAAGAGATCCAACT | + |
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Preference number: 4 (lower is better) Translates to: NLFLTILEAEKSKIKVLTIKGPY*SLRDPT Trigger: AGTTGGATCTCTTAAGGAGCAATACGGGCCTTTTAT...TGTAAGCACCTTGATCTTGGACTTCTCAGCCTCCAGAATTGTGAGAAATAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR GCA 90 bp | AATTTATTTCTCACAATTCTGGAGGCTGAGAAGTCCAAGATCAAGGTGCTTACAAACTGTGCCTTCTTTTaGAGCAATAATCGTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: NLFLTILEAEKSKIKVLTNCAFF*SNNRHL Trigger: GAGATGACGATTATTGCTGCAAAAGAAGGCACAGTT...TGTAAGCACCTTGATCTTGGACTTCTCAGCCTCCAGAATTGTGAGAAATAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR CCA 90 bp | CTTGGTAAATACGGGTATGTTGGCATCTTTTTCCTTGACCCATCAGAAGTCTTGATTTCTTTGTATCATTaGGTTCTGTTTGCTTTCTCG | + |
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Preference number: 4 (lower is better) Translates to: LGKYGYVGIFFLDPSEVLISLYH*VLFAFS Trigger: CGAGAAAGCAAACAGAACCCAATGATACAAAGAAAT...CAAGACTTCTGATGGGTCAAGGAAAAAGATGCCAACATACCCGTATTTACCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR CCA 90 bp | ATTGGAAATGAGATTTCAACATTAGAATTCTGGGGGCACACAAACATTCAGTCTTATTTCTCACAATTCTaGAGGCTGAGAAGTCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: IGNEISTLEFWGHTNIQSYFSQF*RLRSPR Trigger: TCTTGGACTTCTCAGCCTCCAGAATTGTGAGAAATA...AGACTGAATGTTTGTGTGCCCCCAGAATTCTAATGTTGAAATCTCATTTCCAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR TCA 90 bp | ATTGGAAATGAGATTTCAACATTAGAATTCTGGGGGCACACAAACATTCAGTCTAGTAGTCATTGGGTTTaGAGTAAGTATGGTAGCATA | + |
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Preference number: 4 (lower is better) Translates to: IGNEISTLEFWGHTNIQSSSHWV*SKYGSI Trigger: TATGCTACCATACTTACTTCAAACCCAATGACTACT...AGACTGAATGTTTGTGTGCCCCCAGAATTCTAATGTTGAAATCTCATTTCCAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS GCA 90 bp | ACCCGCTCCGGCCACTCCCAAGGGATCCCGGAGAAGGGGTCCAGCTaGCCAAATGACTGGGCGCCTGATGGAGTGCCAAGCCGGAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: TRSGHSQGIPEKGSS*PNDWAPDGVPSRSL Trigger: GAGGCTCCGGCTTGGCACTCCATCAGGCGCCCAGTCATTTGGGCAGCTGGACCCCTTCTCCGGGATCCCTTGGGAGTGGCCGGAGCGGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462997.5 |
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| CDS CCA 90 bp | CACCTTCACCTTCACCTCCGCCATGAGGGCGCAGTTCCTGACGCCTaGGGGGAAAGATGCACGGAGCAGCCCGGTAGCAAGCCGGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: HLHLHLRHEGAVPDA*GERCTEQPGSKPGN Trigger: GTTCCCCGGCTTGCTACCGGGCTGCTCCGTGCATCTTTCCCCCCAGGCGTCAGGAACTGCGCCCTCATGGCGGAGGTGAAGGTGAAGGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000377603.5 ENST00000461589.1 ENST00000462997.5 ENST00000475192.1 ENST00000497333.5 |
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| CDS GCA 90 bp | CAACTGACCCTGTTTTCTATTTCGACCGGATCCGCGTCAGGCGGCTaGACCTTCACCTTCACCTCCGCCATGAGGGCGCAGTTCCTGACG | + |
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Preference number: 5 (lower is better) Translates to: QLTLFSISTGSASGG*TFTFTSAMRAQFLT Trigger: CGTCAGGAACTGCGCCCTCATGGCGGAGGTGAAGGTGAAGGTGCAGCCGCCTGACGCGGATCCGGTCGAAATAGAAAACAGGGTCAGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000489753.1 ENST00000497333.5 |
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| CDS GCA 90 bp | CGGAGAAGGGGTCCAGCTGCCCAAATGACTGGGCGCCTGATGGAGTaGCAAGCCGGAGCCTCACTGGTTTACCTGTTTTCTATTTCGACC | + |
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Preference number: 5 (lower is better) Translates to: RRRGPAAQMTGRLME*QAGASLVYLFSIST Trigger: GGTCGAAATAGAAAACAGGTAAACCAGTGAGGCTCCGGCTTGGCACTCCATCAGGCGCCCAGTCATTTGGGCAGCTGGACCCCTTCTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462997.5 |
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| CDS CCA 90 bp | GCAGAGTCCACAGGGTGCCCGGACCAAACCTGTGGGAGGGATGATTaGATTGACTGCCCTGTACAGTTTCATGTGTCCATCTACACTGCC | + |
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Preference number: 5 (lower is better) Translates to: AESTGCPDQTCGRDD*IDCPVQFHVSIYTA Trigger: GGCAGTGTAGATGGACACATGAAACTGTACAGGGCAGTCAATCCAATCATCCCTCCCACAGGTTTGGTCCGGGCACCCTGTGGACTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377603.5 ENST00000462997.5 |
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| CDS GCA 90 bp | ACAGGGTGCCCGGACCAAACCTGTGGGAGGGATGATTGGATTGACTaGCCTGTACAGTTTCATGTGTCCATCTACACTGCCAACTGTGCC | + |
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Preference number: 5 (lower is better) Translates to: TGCPDQTCGRDDWID*PVQFHVSIYTANCA Trigger: GGCACAGTTGGCAGTGTAGATGGACACATGAAACTGTACAGGGCAGTCAATCCAATCATCCCTCCCACAGGTTTGGTCCGGGCACCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377603.5 ENST00000462997.5 |
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| CDS-3UTR CAA 90 bp | TCGTGGATGTTTGTCTTCTCCCTTTCACATGGCAGAAGGGGTGATGGAGCTCTCCCAAGTTTGCACTCTTaGCTATTCCTGCCTTTAACC | + |
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Preference number: 5 (lower is better) Translates to: SWMFVFSLSHGRRGDGALPSLHS*LFLPLT Trigger: GGTTAAAGGCAGGAATAGCAAAGAGTGCAAACTTGG...GAGAGCTCCATCACCCCTTCTGCCATGTGAAAGGGAGAAGACAAACATCCACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR CAA 90 bp | GAGGCTGAGAAGTCCAAGATCAAGGTGCTTACAGATTTGTTTTCTGGTGAGGACATAGACAACAACCTATaGATGGCTACTGCCCGCTGC | + |
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Preference number: 5 (lower is better) Translates to: EAEKSKIKVLTDLFSGEDIDNNL*MATARC Trigger: GCAGCGGGCAGTAGCCATCAATAGGTTGTTGTCTAT...GTCCTCACCAGAAAACAAATCTGTAAGCACCTTGATCTTGGACTTCTCAGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR CAA 90 bp | TCGTGGATGTTTGTCTTCTCCCTTTCACATGGCAGAAGGGGTGATGGAGCTCTCCGTGCTGTTTCTGCCTaGGACTGTAGGAATTTAAAA | + |
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Preference number: 5 (lower is better) Translates to: SWMFVFSLSHGRRGDGALRAVSA*DCRNLK Trigger: TTTTAAATTCCTACAGTCCAAGGCAGAAACAGCACG...GAGAGCTCCATCACCCCTTCTGCCATGTGAAAGGGAGAAGACAAACATCCACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR CAA 90 bp | CCACTCTCCCCCAGTCATACCCCAAGTTTGCACTCTTTGCTATTCCTGCCTTTAAGTCATACCCCAAGTTaGCACTCTTTGCTATTCCTG | + |
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Preference number: 5 (lower is better) Translates to: PLSPSHTPSLHSLLFLPLSHTPS*HSLLFL Trigger: CAGGAATAGCAAAGAGTGCAAACTTGGGGTATGACT...TAAAGGCAGGAATAGCAAAGAGTGCAAACTTGGGGTATGACTGGGGGAGAGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR CAA 90 bp | GAGGCTGAGAAGTCCAAGATCAAGGTGCTTACAGATTTGTTTTCTGGTGAGGACGTAAATACGGGTATGTaGGCATCTTTTTCCTTGACC | + |
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Preference number: 5 (lower is better) Translates to: EAEKSKIKVLTDLFSGEDVNTGM*ASFSLT Trigger: GGTCAAGGAAAAAGATGCCAACATACCCGTATTTAC...GTCCTCACCAGAAAACAAATCTGTAAGCACCTTGATCTTGGACTTCTCAGCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR CAA 90 bp | CCACTCTCCCCCAGTCATACCCCAAGTTTGCACTCTTTGCTATTCCTGCCTTTAACTGAAAATATGTCCTaGACAGTAGTCATTGGGTTT | + |
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Preference number: 5 (lower is better) Translates to: PLSPSHTPSLHSLLFLPLTENMS*TVVIGF Trigger: AAACCCAATGACTACTGTCAAGGACATATTTTCAGT...TAAAGGCAGGAATAGCAAAGAGTGCAAACTTGGGGTATGACTGGGGGAGAGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS TCA 90 bp | CTATTAAAATTCGAGCCACTCTGTCATGTAAATACAGTTAGATGGTaGAATCTCACCACCTTCGTGGCAGTCATCAAAAACCGGGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: LLKFEPLCHVNTVRW*NLTTFVAVIKNRAE Trigger: CTCTGCCCGGTTTTTGATGACTGCCACGAAGGTGGTGAGATTTCACCATCTAACTGTATTTACATGACAGAGTGGCTCGAATTTTAATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000377603.5 ENST00000462997.5 |
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| CDS TCA 90 bp | AGAGTGAATTCAATCTTCCTCTGCCACTTTGTTCTATTTAGGCCCTaGATGGATTGGATGATGCTCACCCAACTGGACCCATATCTACTT | + |
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Preference number: 5 (lower is better) Translates to: RVNSIFLCHFVLFRP*MDWMMLTQLDPYLL Trigger: AAGTAGATATGGGTCCAGTTGGGTGAGCATCATCCAATCCATTCAGGGCCTAAATAGAACAAAGTGGCAGAGGAAGATTGAATTCACTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461589.1 |
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| CDS-3UTR CAA 90 bp | AATTTATTTCTCACAATTCTGGAGGCTGAGAAGTCCAAGATCAAGGTGCTTACAGGAGGGATGATTGGATaGACTGCCCTGTACAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: NLFLTILEAEKSKIKVLTGGMIG*TALYSF Trigger: GAAACTGTACAGGGCAGTCAATCCAATCATCCCTCC...TGTAAGCACCTTGATCTTGGACTTCTCAGCCTCCAGAATTGTGAGAAATAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS-3UTR CAA 90 bp | TCTCTTTATATAAGGGCACTAATCCCATTCATGAGCGCTGTTACTCTCCTGACCTTCATTCTGAATTACTaGGTCTGTGATTCCATGAGG | + |
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Preference number: 5 (lower is better) Translates to: SLYIRALIPFMSAVTLLTFILNY*VCDSMR Trigger: CCTCATGGAATCACAGACCAAGTAATTCAGAATGAA...GGTCAGGAGAGTAACAGCGCTCATGAATGGGATTAGTGCCCTTATATAAAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS GCA 90 bp | GTACAGTTTCATGTGTCCATCTACACTGCCAACTGTGCCTTCTTTTaGAGCAATAATCGTCATCTCCACTTTTCCATCATAAATGAGTGT | + |
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Preference number: 5 (lower is better) Translates to: VQFHVSIYTANCAFF*SNNRHLHFSIINEC Trigger: ACACTCATTTATGATGGAAAAGTGGAGATGACGATTATTGCTGCAAAAGAAGGCACAGTTGGCAGTGTAGATGGACACATGAAACTGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377603.5 ENST00000462997.5 |
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| CDS TCA 90 bp | CTATTAAAATTCGAGCCACTCTGTCATGTAAATACAGTTAGATGGTaGAATCTCACCACCTTCGTGGCAGTCATCAAAAACCTTACTGAT | + |
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Preference number: 5 (lower is better) Translates to: LLKFEPLCHVNTVRW*NLTTFVAVIKNLTD Trigger: ATCAGTAAGGTTTTTGATGACTGCCACGAAGGTGGTGAGATTTCACCATCTAACTGTATTTACATGACAGAGTGGCTCGAATTTTAATAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000489753.1 ENST00000497333.5 |
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| CDS-3UTR CAA 90 bp | ATTGGAAATGAGATTTCAACATTAGAATTCTGGGGGCACACAAACATTCAGTCTTATAAAAGGCCCGTATaGCTCCTTAAGAGATCCAAC | + |
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Preference number: 5 (lower is better) Translates to: IGNEISTLEFWGHTNIQSYKRPV*LLKRSN Trigger: GTTGGATCTCTTAAGGAGCAATACGGGCCTTTTATA...AGACTGAATGTTTGTGTGCCCCCAGAATTCTAATGTTGAAATCTCATTTCCAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377603.5 |
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| CDS GCA 72 bp | GGCCACTCCCAAGGGATCCCGGAGAAGGGGTCCAGCTaGCCAAATGACTGGGCGCCTGATGGAGTGCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: GHSQGIPEKGSS*PNDWAPDGVPS Trigger: GCTTGGCACTCCATCAGGCGCCCAGTCATTTGGGCAGCTGGACCCCTTCTCCGGGATCCCTTGGGAGTGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462997.5 |
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| CDS CCA 72 bp | CTTCACCTCCGCCATGAGGGCGCAGTTCCTGACGCCTaGGGGGAAAGATGCACGGAGCAGCCCGGTAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: LHLRHEGAVPDA*GERCTEQPGSK Trigger: CTTGCTACCGGGCTGCTCCGTGCATCTTTCCCCCCAGGCGTCAGGAACTGCGCCCTCATGGCGGAGGTGAAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000377603.5 ENST00000461589.1 ENST00000462997.5 ENST00000475192.1 ENST00000489753.1 ENST00000497333.5 |
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| CDS GCA 72 bp | CTGTTTTCTATTTCGACCGGATCCGCGTCAGGCGGCTaGACCTTCACCTTCACCTCCGCCATGAGGGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: LFSISTGSASGG*TFTFTSAMRAQ Trigger: CTGCGCCCTCATGGCGGAGGTGAAGGTGAAGGTGCAGCCGCCTGACGCGGATCCGGTCGAAATAGAAAACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000377603.5 ENST00000461589.1 ENST00000462997.5 ENST00000475192.1 ENST00000489753.1 ENST00000497333.5 |
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| CDS GCA 72 bp | GTGGCAGTCATCAAAAACCGGGCAGAGTCCACAGGGTaGCCGGACCAAACCTGTGGGAGGGATGATTGGATT | + |
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Preference number: 6 (lower is better) Translates to: VAVIKNRAESTG*PDQTCGRDDWI Trigger: AATCCAATCATCCCTCCCACAGGTTTGGTCCGGGCACCCTGTGGACTCTGCCCGGTTTTTGATGACTGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000377603.5 ENST00000462997.5 |
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| CDS GCA 72 bp | CCGGACCAAACCTGTGGGAGGGATGATTGGATTGACTaGCCTGTACAGTTTCATGTGTCCATCTACACTGCC | + |
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Preference number: 6 (lower is better) Translates to: PDQTCGRDDWID*PVQFHVSIYTA Trigger: GGCAGTGTAGATGGACACATGAAACTGTACAGGGCAGTCAATCCAATCATCCCTCCCACAGGTTTGGTCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377603.5 ENST00000462997.5 |
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| CDS CCA 72 bp | TGGTTAAGCACCTCTACAAATTCAGATTCAAAATCCTaGTCACTGTACCAGGCTCCACCAGTCACAGACCGG | + |
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Preference number: 6 (lower is better) Translates to: WLSTSTNSDSKS*SLYQAPPVTDR Trigger: CCGGTCTGTGACTGGTGGAGCCTGGTACAGTGACCAGGATTTTGAATCTGAATTTGTAGAGGTGCTTAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000377603.5 ENST00000462997.5 ENST00000489753.1 |
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| CDS TCA 72 bp | TCAATCTTCCTCTGCCACTTTGTTCTATTTAGGCCCTaGATGGATTGGATGATGCTCACCCAACTGGACCCA | + |
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Preference number: 6 (lower is better) Translates to: SIFLCHFVLFRP*MDWMMLTQLDP Trigger: TGGGTCCAGTTGGGTGAGCATCATCCAATCCATTCAGGGCCTAAATAGAACAAAGTGGCAGAGGAAGATTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461589.1 |
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| CDS GCA 72 bp | TCACCTTACCATAGACAACAACCTATTGATGGCTACTaGCCGCTGCTGGGCTTCTATATGAGGCATTTCATT | + |
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Preference number: 6 (lower is better) Translates to: SPYHRQQPIDGY*PLLGFYMRHFI Trigger: AATGAAATGCCTCATATAGAAGCCCAGCAGCGGGCAGTAGCCATCAATAGGTTGTTGTCTATGGTAAGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461589.1 |
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| CDS TCA 72 bp | TTCGAGCCACTCTGTCATGTAAATACAGTTAGATGGTaGAATCTCACCACCTTCGTGGCAGTCATCAAAAAC | + |
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Preference number: 6 (lower is better) Translates to: FEPLCHVNTVRW*NLTTFVAVIKN Trigger: GTTTTTGATGACTGCCACGAAGGTGGTGAGATTTCACCATCTAACTGTATTTACATGACAGAGTGGCTCGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000377603.5 ENST00000462997.5 ENST00000489753.1 ENST00000497333.5 |
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| CDS GCA 72 bp | CATGTGTCCATCTACACTGCCAACTGTGCCTTCTTTTaGAGCAATAATCGTCATCTCCACTTTTCCATCATA | + |
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Preference number: 6 (lower is better) Translates to: HVSIYTANCAFF*SNNRHLHFSII Trigger: TATGATGGAAAAGTGGAGATGACGATTATTGCTGCAAAAGAAGGCACAGTTGGCAGTGTAGATGGACACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377603.5 ENST00000462997.5 |
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