RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POLR3A (Homo sapiens)

Ensembl gene IDs: ENSG00000148606

Ensembl transcript IDs: ENST00000372371.8, ENST00000472014.5, ENST00000473588.2, ENST00000484760.1, ENST00000616246.4

Found 578 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCTCAGCTCTCCCGAGCAGCGTGGCACAGTCAGGGTCACTGGTGTaGGCTGCACCCTATCAGAGGAGAAGCTGCTCCTGGGGATGCCAA +
Preference number: 1 (lower is better)
Translates to: PSALPSSVAQSGSLV*AAPYQRRSCSWGCQ
Trigger: TTGGCATCCCCAGGAGCAGCTTCTCCTCTGATAGGGTGCAGCTCACACCAGTGACCCTGACTGTGCCACGCTGCTCGGGAGAGCTGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR GCA 90 bp AGGATCAGTGCCTCCAGGGTCTCCTCAGCAGTGCAGCCAGGCTGCTaGTGCAGCTTGCCCGTGTTCAGGGCTTCGATGTACTCATCACAT +
Preference number: 1 (lower is better)
Translates to: RISASRVSSAVQPGC*CSLPVFRASMYSSH
Trigger: ATGTGATGAGTACATCGAAGCCCTGAACACGGGCAAGCTGCAGCAGCAGCCTGGCTGCACTGCTGAGGAGACCCTGGAGGCACTGATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
3UTR CCA 90 bp CCGATGGATGTATGCAGTGAGCTGGGATGGACCATGACACCTGGCTaGGCTTTAAGTCCAGGGAAGCAGTGTGTGCACGAGCTGTGGGGC +
Preference number: 1 (lower is better)
Translates to: PMDVCSELGWTMTPG*ALSPGKQCVHELWG
Trigger: GCCCCACAGCTCGTGCACACACTGCTTCCCTGGACTTAAAGCCCAGCCAGGTGTCATGGTCCATCCCAGCTCACTGCATACATCCATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR GCA 90 bp CCAGTGTCAGGTGATTATACCATGCTCCCTGACTCGGAGCTTTACTaGAGGCCACTCGGGTCAGGCCTGTTCCTCGGTGGTGGAACAGAC +
Preference number: 1 (lower is better)
Translates to: PVSGDYTMLPDSELY*RPLGSGLFLGGGTD
Trigger: GTCTGTTCCACCACCGAGGAACAGGCCTGACCCGAGTGGCCTGCAGTAAAGCTCCGAGTCAGGGAGCATGGTATAATCACCTGACACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR CCA 90 bp TTCAATTCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTaGCTCGGATCAGGCCTACAGCTTACTTCCCAGGCATGCTTCCAG +
Preference number: 1 (lower is better)
Translates to: FNSTLPWPLHGSQWS*LGSGLQLTSQACFQ
Trigger: CTGGAAGCATGCCTGGGAAGTAAGCTGTAGGCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGAATTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR TCA 90 bp TCGTCAGGTGTGAAGACACCATGGGGAGCCGATGGATGTATGCAGTaGGCTGGGATGGACCATGACACCTGGCTGGGCTTTAAGTCCAGG +
Preference number: 1 (lower is better)
Translates to: SSGVKTPWGADGCMQ*AGMDHDTWLGFKSR
Trigger: CCTGGACTTAAAGCCCAGCCAGGTGTCATGGTCCATCCCAGCTCACTGCATACATCCATCGGCTCCCCATGGTGTCTTCACACCTGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR TCA 90 bp TGTGCGTCACCCGCAGAAGACAACAGGTGCCGGAGTTCACTCCTATaGTTCAATTCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGG +
Preference number: 1 (lower is better)
Translates to: CASPAEDNRCRSSLL*FNSTLPWPLHGSQW
Trigger: CCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGAATTGAATCATAGGAGTGAACTCCGGCACCTGTTGTCTTCTGCGGGTGACGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR GCA 90 bp GCCGGAGTTCACTCCTATGATTCAATTCTACCCTCCCCTGGCCTTTaGACGGATCCCAGTGGTCCTGGCTCGGATCAGGCCTACAGCTTA +
Preference number: 1 (lower is better)
Translates to: AGVHSYDSILPSPGL*TDPSGPGSDQAYSL
Trigger: TAAGCTGTAGGCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGAATTGAATCATAGGAGTGAACTCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR TCA 90 bp GGAAGCACAGGCCTACTTAAGGCCTGGACAACCCAAAAAGCTTCCTaGGAAGGTGATGAGACTCGGGTCTGGATACACTGGGCTCTCTTC +
Preference number: 1 (lower is better)
Translates to: GSTGLLKAWTTQKAS*EGDETRVWIHWALF
Trigger: GAAGAGAGCCCAGTGTATCCAGACCCGAGTCTCATCACCTTCTCAGGAAGCTTTTTGGGTTGTCCAGGCCTTAAGTAGGCCTGTGCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR CCA 90 bp CTGCAGCGCCCAACTGAGTACTCACTCACGCAAGGTGAGGCTCCTTaGCGGTGCCATCTTTATTATTCCCAGCCACAAGTTATAGCCACA +
Preference number: 1 (lower is better)
Translates to: LQRPTEYSLTQGEAP*RCHLYYSQPQVIAT
Trigger: TGTGGCTATAACTTGTGGCTGGGAATAATAAAGATGGCACCGCCAAGGAGCCTCACCTTGCGTGAGTGAGTACTCAGTTGGGCGCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR GCA 90 bp CGCCCAACTGAGTACTCACTCACGCAAGGTGAGGCTCCTTGGCGGTaGCATCTTTATTATTCCCAGCCACAAGTTATAGCCACAACCTCT +
Preference number: 1 (lower is better)
Translates to: RPTEYSLTQGEAPWR*HLYYSQPQVIATTS
Trigger: AGAGGTTGTGGCTATAACTTGTGGCTGGGAATAATAAAGATGGCACCGCCAAGGAGCCTCACCTTGCGTGAGTGAGTACTCAGTTGGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR CCA 90 bp TGCTACCTGGCCTTTGAGCTCTGTGCTGGCATAAAGCCCAAGGCCTaGGCAGGGCAGATGATCAAAGTAGGGAGAATTTTAACACCAGTC +
Preference number: 1 (lower is better)
Translates to: CYLAFELCAGIKPKA*AGQMIKVGRILTPV
Trigger: GACTGGTGTTAAAATTCTCCCTACTTTGATCATCTGCCCTGCCCAGGCCTTGGGCTTTATGCCAGCACAGAGCTCAAAGGCCAGGTAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR GCA 90 bp TCCCAGCCACAAGTTATAGCCACAACCTCTCTTCCATTTAAAGTGTaGGTCACCCGCAGAAGACAACAGGTGCCGGAGTTCACTCCTATG +
Preference number: 1 (lower is better)
Translates to: SQPQVIATTSLPFKV*VTRRRQQVPEFTPM
Trigger: CATAGGAGTGAACTCCGGCACCTGTTGTCTTCTGCGGGTGACGCACACTTTAAATGGAAGAGAGGTTGTGGCTATAACTTGTGGCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR GCA 90 bp CACCTCAGCCTTACCAATAGCAGGTACTACAGGCATGGGCCACCATaGCTGGCTAATTTTTGTATTCTCTGTAGAGACGGGGTTTCGTCA +
Preference number: 1 (lower is better)
Translates to: HLSLTNSRYYRHGPP*LANFCILCRDGVSS
Trigger: TGACGAAACCCCGTCTCTACAGAGAATACAAAAATTAGCCAGGCATGGTGGCCCATGCCTGTAGTACCTGCTATTGGTAAGGCTGAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR GCA 90 bp GCATCTATAGAAGATGTTACAGAGCTGCCTGGGCCTCATGACAGTTaGACCTCAGTTACAAATCCCAGACGGCTCTATTTGCTTAAACCA +
Preference number: 1 (lower is better)
Translates to: ASIEDVTELPGPHDS*TSVTNPRRLYLLKP
Trigger: TGGTTTAAGCAAATAGAGCCGTCTGGGATTTGTAACTGAGGTGCAACTGTCATGAGGCCCAGGCAGCTCTGTAACATCTTCTATAGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR TCA 90 bp TTACAAATCCCAGACGGCTCTATTTGCTTAAACCAGTTTTTCCAGTaGCGCTTACATGCTGACTTTCTTGGTTTCTATAGATGCTTGGTT +
Preference number: 1 (lower is better)
Translates to: LQIPDGSICLNQFFQ*RLHADFLGFYRCLV
Trigger: AACCAAGCATCTATAGAAACCAAGAAAGTCAGCATGTAAGCGTCACTGGAAAAACTGGTTTAAGCAAATAGAGCCGTCTGGGATTTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR GCA 90 bp TCTTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATCACAGACAGGGTCTCCTCAGCAGTaGAGCCAGGCTGCTGCTGCA +
Preference number: 2 (lower is better)
Translates to: SCPAPGGRHCQRGHGSQTGSPQQ*SQAAAA
Trigger: TGCAGCAGCAGCCTGGCTGCACTGCTGAGGAGACCC...TGTCTGTGATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
3UTR-3UTR CCA 90 bp TTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATCACAGACAGCGCCTTCAGCAGTCCTTaGCCAGGTGTGACATCACCG +
Preference number: 2 (lower is better)
Translates to: LSSSRRQALPAWSRITDSAFSSP*PGVTSP
Trigger: CGGTGATGTCACACCTGGCCAAGGACTGCTGAAGGC...GCTGTCTGTGATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
3UTR-3UTR GCA 90 bp TCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGCTCGGATCAGGCGAGCCGATGGATGTATaGAGTGAGCTGGGATGGACC +
Preference number: 2 (lower is better)
Translates to: STLPWPLHGSQWSWLGSGEPMDV*SELGWT
Trigger: GGTCCATCCCAGCTCACTGCATACATCCATCGGCTC...GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR GCA 90 bp TCTTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATCACAGACACTCCTTCAGGATCAGTaGCTCCAGGGTCTCCTCAGC +
Preference number: 2 (lower is better)
Translates to: SCPAPGGRHCQRGHGSQTLLQDQ*LQGLLS
Trigger: GCTGAGGAGACCCTGGAGGCACTGATCCTGAAGGAG...TGTCTGTGATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
3UTR-3UTR CCA 90 bp CACAGACTCCAGACCCTGCAGCGCCCAACTGAGTACTCACTCACGCAAGGTGAGTCCAAGAATGTGCCCTaGCCTGTGTGGGGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: HRLQTLQRPTEYSLTQGESKNVP*PVWGSG
Trigger: GCCTGAGCCCCACACAGGCCAGGGCACATTCTTGGA...CTCACCTTGCGTGAGTGAGTACTCAGTTGGGCGCTGCAGGGTCTGGAGTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR GCA 90 bp TCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGCTCGGATCAGGCGGGCCTCATGACAGTTaGACCTCAGTTACAAATCCC +
Preference number: 2 (lower is better)
Translates to: STLPWPLHGSQWSWLGSGGPHDS*TSVTNP
Trigger: GGGATTTGTAACTGAGGTGCAACTGTCATGAGGCCC...GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR GCA 90 bp GGAGCTTTACTGCAGGCCACTCGGGTCAGGCCTGTTCCTCGGTGGTGGAACAGATCCCAAGTGCTGGGATaGTGGGATTATGGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: GALLQATRVRPVPRWWNRSQVLG*WDYGCE
Trigger: CTCACACCCATAATCCCAGCATCCCAGCACTTGGGA...TCTGTTCCACCACCGAGGAACAGGCCTGACCCGAGTGGCCTGCAGTAAAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR-3UTR GCA 90 bp CTTCCCCAGCCCACTGGCACTCCTCCCAGAAATGAAGTTTGGAAGCACAGGCCTCCTCGGCCTCCCAAGTaGTGGGATGCTGGGATTATG +
Preference number: 2 (lower is better)
Translates to: LPQPTGTPPRNEVWKHRPPRPPK*WDAGIM
Trigger: CATAATCCCAGCATCCCAGCACTTGGGAGGCCGAGG...AGGCCTGTGCTTCCAAACTTCATTTCTGGGAGGAGTGCCAGTGGGCTGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR-3UTR TCA 90 bp GCATTCAGCAACTCATACTTGGCCTTCAGCAGTCCTTGGCCAGGTGTGACATCACAGCCTGGCGAGCCGTaGCATGGCATCTGCAGCTTC +
Preference number: 2 (lower is better)
Translates to: AFSNSYLAFSSPWPGVTSQPGEP*HGICSF
Trigger: GAAGCTGCAGATGCCATGTCACGGCTCGCCAGGCTG...TGATGTCACACCTGGCCAAGGACTGCTGAAGGCCAAGTATGAGTTGCTGAATGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
3UTR-3UTR CCA 90 bp TTCCATTTAAAGTGTGCGTCACCCGCAGAAGACAACAGGTGCCGGAGTTCACTCCTCTCCCGAGCAGCGTaGCACAGTCAGGGTCACTGG +
Preference number: 2 (lower is better)
Translates to: FHLKCASPAEDNRCRSSLLSRAA*HSQGHW
Trigger: CCAGTGACCCTGACTGTGCCACGCTGCTCGGGAGAG...GAGTGAACTCCGGCACCTGTTGTCTTCTGCGGGTGACGCACACTTTAAATGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR TCA 90 bp GTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAGGAGGACCAGCACCGATGGATGTATGCAGTaGGCTGGGATGGACCATGAC +
Preference number: 2 (lower is better)
Translates to: VDVDSPSKAGSSRRRTSTDGCMQ*AGMDHD
Trigger: GTCATGGTCCATCCCAGCTCACTGCATACATCCATC...GGTGCTGGTCCTCCTCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR GCA 90 bp ACCATGCTCCCTGACTCGGAGCTTTACTGCAGGCCACTCGGGTCAGGCCTGTTCAGGCACATGCCACCATaGCTGGCTAATTTTTGTATC +
Preference number: 2 (lower is better)
Translates to: TMLPDSELYCRPLGSGLFRHMPP*LANFCI
Trigger: GATACAAAAATTAGCCAGGCATGGTGGCATGTGCCT...GAACAGGCCTGACCCGAGTGGCCTGCAGTAAAGCTCCGAGTCAGGGAGCATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR-3UTR CCA 90 bp CCGGCATTCAGCAACTCATACTTGGCCTTCAGCAGTCCTTGGCCAGGTGTGACATGGCGAGCCGTGACATaGCATCTGCAGCTTCATTCT +
Preference number: 2 (lower is better)
Translates to: PAFSNSYLAFSSPWPGVTWRAVT*HLQLHS
Trigger: AGAATGAAGCTGCAGATGCCATGTCACGGCTCGCCA...TGTCACACCTGGCCAAGGACTGCTGAAGGCCAAGTATGAGTTGCTGAATGCCGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
3UTR-3UTR CCA 90 bp TGTTCCTCGGTGGTGGAACAGACTGCAAGGTACAAGAACAGGCTTCTTCTAGCCCGGCCTCCCAAGTGCTaGGATGCTGGGATTATGGGT +
Preference number: 2 (lower is better)
Translates to: CSSVVEQTARYKNRLLLARPPKC*DAGIMG
Trigger: ACCCATAATCCCAGCATCCCAGCACTTGGGAGGCCG...GGCTAGAAGAAGCCTGTTCTTGTACCTTGCAGTCTGTTCCACCACCGAGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR CAA 90 bp GTGGGGAGCACAAACAGTAGGGTTTACCAGGCAATGCTGTTGATGTaGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAGGAGGACCAGCA +
Preference number: 2 (lower is better)
Translates to: VGSTNSRVYQAMLLM*IVLARLAVPGGGPA
Trigger: TGCTGGTCCTCCTCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTAAACCCTACTGTTTGTGCTCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR GCA 90 bp TGGCTCTTCCCAGGTTACATGAGAACTGGTGATCTCGGTGGGGTCTCAAGTAGAGAGGGCTTCTCTGATTaGTGGCATAGGTGGGGACCT +
Preference number: 2 (lower is better)
Translates to: WLFPGYMRTGDLGGVSSREGFSD*WHRWGP
Trigger: AGGTCCCCACCTATGCCAGCAATCAGAGAAGCCCTC...TCTACTTGAGACCCCACCGAGATCACCAGTTCTCATGTAACCTGGGAAGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR GCA 90 bp AGGGCAGATGATCAAAGTAGGGAGAATTTTAACACCAGTCATGGGACACAGTGGCCCTCCCCTGGCCTTTaGACGGATCCCAGTGGTCCT +
Preference number: 2 (lower is better)
Translates to: RADDQSRENFNTSHGTQWPSPGL*TDPSGP
Trigger: AGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGG...CCACTGTGTCCCATGACTGGTGTTAAAATTCTCCCTACTTTGATCATCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CCA 90 bp CCAGTGTCAGGTGATTATACCATGCTCCCTGACTCGGAGCTTTACTGCAGGCCACAAGTGCTGGGATGCTaGGATTATGGGTGTGAGCCA +
Preference number: 2 (lower is better)
Translates to: PVSGDYTMLPDSELYCRPQVLGC*DYGCEP
Trigger: TGGCTCACACCCATAATCCCAGCATCCCAGCACTTG...TGGCCTGCAGTAAAGCTCCGAGTCAGGGAGCATGGTATAATCACCTGACACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR-3UTR CCA 90 bp TGTTCCTCGGTGGTGGAACAGACTGCAAGGTACAAGAACAGGCTTCTTCTAGCCCAGGCTGGAGTGCATTaGCGCAATTTTGGCTCACCG +
Preference number: 2 (lower is better)
Translates to: CSSVVEQTARYKNRLLLAQAGVH*RNFGSP
Trigger: CGGTGAGCCAAAATTGCGCCAATGCACTCCAGCCTG...GGCTAGAAGAAGCCTGTTCTTGTACCTTGCAGTCTGTTCCACCACCGAGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR CAA 90 bp GACACAGTGGGGAGCACAAACAGTAGGGTTTACCAGGCAATGCTGTaGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAGGAGGA +
Preference number: 2 (lower is better)
Translates to: DTVGSTNSRVYQAML*MLIVLARLAVPGGG
Trigger: TCCTCCTCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTAAACCCTACTGTTTGTGCTCCCCACTGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR GCA 90 bp TGGCTCTTCCCAGGTTACATGAGAACTGGTGATCTCGGTGGGGTCTCAAGTAGAGTCACTGGTGTGAGCTaGACCCTATCAGAGGAGAAG +
Preference number: 2 (lower is better)
Translates to: WLFPGYMRTGDLGGVSSRVTGVS*TLSEEK
Trigger: CTTCTCCTCTGATAGGGTGCAGCTCACACCAGTGAC...TCTACTTGAGACCCCACCGAGATCACCAGTTCTCATGTAACCTGGGAAGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CCA 90 bp CACAGACTCCAGACCCTGCAGCGCCCAACTGAGTACTCACTCACGCAAGGTGAGTCTTTATACATCAGCTaGAGACAGGACAAGGAGTCA +
Preference number: 2 (lower is better)
Translates to: HRLQTLQRPTEYSLTQGESLYIS*RQDKES
Trigger: TGACTCCTTGTCCTGTCTCCAGCTGATGTATAAAGA...CTCACCTTGCGTGAGTGAGTACTCAGTTGGGCGCTGCAGGGTCTGGAGTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CCA 90 bp TTACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGGGCTTCTCTGATTGCTaGCATAGGTGGGGACCTCAG +
Preference number: 2 (lower is better)
Translates to: LPGNAVDVDSPSKAGSSRGFSDC*HRWGPQ
Trigger: CTGAGGTCCCCACCTATGCCAGCAATCAGAGAAGCC...CCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CCA 90 bp CCTATGATTCAATTCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGATAGGCCATGGAGAATaGGTTTGGCTCTTGTCACAG +
Preference number: 2 (lower is better)
Translates to: PMIQFYPPLAFARIPVVLIGHGE*VWLLSQ
Trigger: CTGTGACAAGAGCCAAACCCATTCTCCATGGCCTAT...CAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGAATTGAATCATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CCA 90 bp GGGCTTCGATGTACTCATCACATTTCTTGTAGCCGGCATTCAGCAACTCATACTAGACAGGAGCCAGCCTaGCGAGCCGTGACATGGCAT +
Preference number: 2 (lower is better)
Translates to: GLRCTHHISCSRHSATHTRQEPA*RAVTWH
Trigger: ATGCCATGTCACGGCTCGCCAGGCTGGCTCCTGTCT...AGTATGAGTTGCTGAATGCCGGCTACAAGAAATGTGATGAGTACATCGAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
3UTR-3UTR TCA 90 bp GGCCAAAAATCACTCGGTCACGAATTCCTAATCCACAATCACATCAGTAGGAAGGCTCATCGTCAGGTGTaGAGACACCATGGGGAGCCG +
Preference number: 2 (lower is better)
Translates to: GQKSLGHEFLIHNHISRKAHRQV*RHHGEP
Trigger: CGGCTCCCCATGGTGTCTTCACACCTGACGATGAGC...CTTCCTACTGATGTGATTGTGGATTAGGAATTCGTGACCGAGTGATTTTTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR TCA 90 bp CCAGTGTCAGGTGATTATACCATGCTCCCTGACTCGGAGCTTTACTGCAGGCCACCTGCTTCTCTTTTCTaGGTGTGGACTATCCACCTT +
Preference number: 2 (lower is better)
Translates to: PVSGDYTMLPDSELYCRPPASLF*VWTIHL
Trigger: AAGGTGGATAGTCCACACTCAGAAAAGAGAAGCAGG...TGGCCTGCAGTAAAGCTCCGAGTCAGGGAGCATGGTATAATCACCTGACACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR-3UTR CCA 90 bp CCTTGGCGGTGCCATCTTTATTATTCCCAGCCACAAGTTATAGCCACAACCTCTCACAGTCAGGGTCACTaGTGTGAGCTGCACCCTATC +
Preference number: 2 (lower is better)
Translates to: PWRCHLYYSQPQVIATTSHSQGH*CELHPI
Trigger: GATAGGGTGCAGCTCACACCAGTGACCCTGACTGTG...AGAGGTTGTGGCTATAACTTGTGGCTGGGAATAATAAAGATGGCACCGCCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CCA 90 bp ACAGTGGGGAGCACAAACAGTAGGGTTTACCAGGCAATGCTGTTGATGTTGATATGTGGGGCTCAGGCCTaGCTCATCGTCAGGTGTGAA +
Preference number: 2 (lower is better)
Translates to: TVGSTNSRVYQAMLLMLICGAQA*LIVRCE
Trigger: TTCACACCTGACGATGAGCCAGGCCTGAGCCCCACA...TATCAACATCAACAGCATTGCCTGGTAAACCCTACTGTTTGTGCTCCCCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR TCA 90 bp TACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGATCTTCCCAGGTTACATaGGAACTGGTGATCTCGGTG +
Preference number: 2 (lower is better)
Translates to: YQAMLLMLIVLARLAVPGSSQVT*ELVISV
Trigger: CACCGAGATCACCAGTTCTCATGTAACCTGGGAAGA...TCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR TCA 90 bp GCTTGCCCGTGTTCAGGGCTTCGATGTACTCATCACATTTCTTGTAGCCGGCATATCACCGATCCCAATTaGGAAACCACGGTTAGACAG +
Preference number: 2 (lower is better)
Translates to: ACPCSGLRCTHHISCSRHITDPN*ETTVRQ
Trigger: CTGTCTAACCGTGGTTTCTCAATTGGGATCGGTGAT...ATGCCGGCTACAAGAAATGTGATGAGTACATCGAAGCCCTGAACACGGGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
3UTR-3UTR GCA 90 bp CCTTGGCGGTGCCATCTTTATTATTCCCAGCCACAAGTTATAGCCACAACCTCTTATCAGAGGAGAAGCTaGTCCTGGGGATGCCAAGAG +
Preference number: 2 (lower is better)
Translates to: PWRCHLYYSQPQVIATTSYQRRS*SWGCQE
Trigger: CTCTTGGCATCCCCAGGAGCAGCTTCTCCTCTGATA...AGAGGTTGTGGCTATAACTTGTGGCTGGGAATAATAAAGATGGCACCGCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CCA 90 bp GTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAGGAGGACCAGCACCAGCATGACCAAGGAATaGAAAATCCAAGAATGTGCC +
Preference number: 2 (lower is better)
Translates to: VDVDSPSKAGSSRRRTSTSMTKE*KIQECA
Trigger: GGCACATTCTTGGATTTTCCATTCCTTGGTCATGCT...GGTGCTGGTCCTCCTCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CCA 90 bp CCAGTGTCAGGTGATTATACCATGCTCCCTGACTCGGAGCTTTACTGCAGGCCATTGTTCCATACTCCTTaGCAGATTCCAGCTTCCATG +
Preference number: 2 (lower is better)
Translates to: PVSGDYTMLPDSELYCRPLFHTP*QIPASM
Trigger: CATGGAAGCTGGAATCTGCCAAGGAGTATGGAACAA...TGGCCTGCAGTAAAGCTCCGAGTCAGGGAGCATGGTATAATCACCTGACACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR-3UTR GCA 90 bp ACAGTGGGGAGCACAAACAGTAGGGTTTACCAGGCAATGCTGTTGATGTTGATAGAAAATCCAAGAATGTaGCCTGGCCTGTGTGGGGCT +
Preference number: 2 (lower is better)
Translates to: TVGSTNSRVYQAMLLMLIENPRM*PGLCGA
Trigger: AGCCCCACACAGGCCAGGGCACATTCTTGGATTTTC...TATCAACATCAACAGCATTGCCTGGTAAACCCTACTGTTTGTGCTCCCCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CCA 90 bp TCACACGTATTTTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTGTGCCCTGGCCTGTGTaGGGCTCAGGCCTGGCTCAT +
Preference number: 2 (lower is better)
Translates to: SHVFLFLPSRYRDSNVTLVPWPV*GSGLAH
Trigger: ATGAGCCAGGCCTGAGCCCCACACAGGCCAGGGCAC...AAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAAAATACGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CCA 90 bp ACAGTGGGGAGCACAAACAGTAGGGTTTACCAGGCAATGCTGTTGATGTTGATAGTAGTGGCACGATCTTaGCTCACTACAACCTCCACC +
Preference number: 2 (lower is better)
Translates to: TVGSTNSRVYQAMLLMLIVVARS*LTTTST
Trigger: GGTGGAGGTTGTAGTGAGCCAAGATCGTGCCACTAC...TATCAACATCAACAGCATTGCCTGGTAAACCCTACTGTTTGTGCTCCCCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR TCA 90 bp GATTGTGATTTACCTGTAACACCAGTGTCAGGTGATTATACCATGCTCCCTGACCACTCCTCCCAGAAATaGAGTTTGGAAGCACAGGCC +
Preference number: 2 (lower is better)
Translates to: DCDLPVTPVSGDYTMLPDHSSQK*SLEAQA
Trigger: GGCCTGTGCTTCCAAACTTCATTTCTGGGAGGAGTG...GTCAGGGAGCATGGTATAATCACCTGACACTGGTGTTACAGGTAAATCACAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR-3UTR GCA 90 bp GATTGTGATTTACCTGTAACACCAGTGTCAGGTGATTATACCATGCTCCCTGACTCCAAGCGATTCTCATaGTTCAGCCTCCCGAGTAGC +
Preference number: 2 (lower is better)
Translates to: DCDLPVTPVSGDYTMLPDSKRFS*FSLPSS
Trigger: GCTACTCGGGAGGCTGAAGCATGAGAATCGCTTGGA...GTCAGGGAGCATGGTATAATCACCTGACACTGGTGTTACAGGTAAATCACAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR-3UTR CCA 90 bp GGCCAAAAATCACTCGGTCACGAATTCCTAATCCACAATCACATCAGTAGGAAGATGGACCATGACACCTaGCTGGGCTTTAAGTCCAGG +
Preference number: 2 (lower is better)
Translates to: GQKSLGHEFLIHNHISRKMDHDT*LGFKSR
Trigger: CCTGGACTTAAAGCCCAGCCAGGTGTCATGGTCCAT...CTTCCTACTGATGTGATTGTGGATTAGGAATTCGTGACCGAGTGATTTTTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR TCA 90 bp TTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTGAGCTCTCATTCAGGGTCACTGGTGTaGGCTGCACCCTATCAGAGG +
Preference number: 2 (lower is better)
Translates to: FISSKQVQRLKCNPLSSHSGSLV*AAPYQR
Trigger: CCTCTGATAGGGTGCAGCTCACACCAGTGACCCTGA...ATGAGAGCTCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR TCA 90 bp TCACACGTATTTTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTGGCCCCAAACTCCAGTaGGGCTTCCATAGGCCATGG +
Preference number: 2 (lower is better)
Translates to: SHVFLFLPSRYRDSNVTLGPKLQ*GFHRPW
Trigger: CCATGGCCTATGGAAGCCTCACTGGAGTTTGGGGCC...AAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAAAATACGTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CCA 90 bp GGCCAAAAATCACTCGGTCACGAATTCCTAATCCACAATCACATCAGTAGGAAGGGCTTCCATAGGCCATaGAGAATGGGTTTGGCTCTT +
Preference number: 2 (lower is better)
Translates to: GQKSLGHEFLIHNHISRKGFHRP*RMGLAL
Trigger: AAGAGCCAAACCCATTCTCCATGGCCTATGGAAGCC...CTTCCTACTGATGTGATTGTGGATTAGGAATTCGTGACCGAGTGATTTTTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CCA 90 bp TCACACGTATTTTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTTGCACGGATCCCAGTaGTCCTGGCTCGGATCAGGC +
Preference number: 2 (lower is better)
Translates to: SHVFLFLPSRYRDSNVTLLHGSQ*SWLGSG
Trigger: GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAA...AAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAAAATACGTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CCA 90 bp GATTGTGATTTACCTGTAACACCAGTGTCAGGTGATTATACCATGCTCCCTGACGGCCTACTTAAGGCCTaGACAACCCAAAAAGCTTCC +
Preference number: 2 (lower is better)
Translates to: DCDLPVTPVSGDYTMLPDGLLKA*TTQKAS
Trigger: GGAAGCTTTTTGGGTTGTCCAGGCCTTAAGTAGGCC...GTCAGGGAGCATGGTATAATCACCTGACACTGGTGTTACAGGTAAATCACAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR-3UTR TCA 90 bp AGGAAGATCATGTTGTCTATGGGGAGAGATTGTGATTTACCTGTAACACCAGTGTTATACCATGCTCCCTaGCTCGGAGCTTTACTGCAG +
Preference number: 2 (lower is better)
Translates to: RKIMLSMGRDCDLPVTPVLYHAP*LGALLQ
Trigger: CTGCAGTAAAGCTCCGAGTCAGGGAGCATGGTATAA...CACTGGTGTTACAGGTAAATCACAATCTCTCCCCATAGACAACATGATCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR-3UTR CCA 90 bp TTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTGAGCTCTCATACCATGGGGAGCCGATaGATGTATGCAGTGAGCTGG +
Preference number: 2 (lower is better)
Translates to: FISSKQVQRLKCNPLSSHTMGSR*MYAVSW
Trigger: CCAGCTCACTGCATACATCCATCGGCTCCCCATGGT...ATGAGAGCTCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR TCA 90 bp ACAGTGGGGAGCACAAACAGTAGGGTTTACCAGGCAATGCTGTTGATGTTGATAAACCAGTTTTTCCAGTaGCGCTTACATGCTGACTTT +
Preference number: 2 (lower is better)
Translates to: TVGSTNSRVYQAMLLMLINQFFQ*RLHADF
Trigger: AAAGTCAGCATGTAAGCGTCACTGGAAAAACTGGTT...TATCAACATCAACAGCATTGCCTGGTAAACCCTACTGTTTGTGCTCCCCACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR TCA 90 bp AAGATCATGTTGTCTATGGGGAGAGATTGTGATTTACCTGTAACACCAGTGTCAACCCAAAAAGCTTCCTaGGAAGGTGATGAGACTCGG +
Preference number: 2 (lower is better)
Translates to: KIMLSMGRDCDLPVTPVSTQKAS*EGDETR
Trigger: CCGAGTCTCATCACCTTCTCAGGAAGCTTTTTGGGT...TGACACTGGTGTTACAGGTAAATCACAATCTCTCCCCATAGACAACATGATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR-3UTR GCA 90 bp TCACACGTATTTTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTCCATCTCATCCCCATTaGAGCAGGCCCCAAACTCCA +
Preference number: 2 (lower is better)
Translates to: SHVFLFLPSRYRDSNVTLPSHPH*SRPQTP
Trigger: TGGAGTTTGGGGCCTGCTGCAATGGGGATGAGATGG...AAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAAAATACGTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CCA 90 bp TCACACGTATTTTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTAATTCTACCCTCCCCTaGCCTTTGCACGGATCCCAG +
Preference number: 2 (lower is better)
Translates to: SHVFLFLPSRYRDSNVTLNSTLP*PLHGSQ
Trigger: CTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGAATT...AAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAAAATACGTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR GCA 90 bp TTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTGAGCTCTCATAAGATGTTACAGAGCTaGCTGGGCCTCATGACAGTT +
Preference number: 2 (lower is better)
Translates to: FISSKQVQRLKCNPLSSHKMLQS*LGLMTV
Trigger: AACTGTCATGAGGCCCAGGCAGCTCTGTAACATCTT...ATGAGAGCTCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CCA 90 bp TTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTGAGCTCTCATTTTAAACCCAACCACTaGCCAAAAATCACTCGGTCA +
Preference number: 2 (lower is better)
Translates to: FISSKQVQRLKCNPLSSHFKPNH*PKITRS
Trigger: TGACCGAGTGATTTTTGGCCAGTGGTTGGGTTTAAA...ATGAGAGCTCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR GCA 72 bp GCCTCCAGGGTCTCCTCAGCAGTGCAGCCAGGCTGCTaGTGCAGCTTGCCCGTGTTCAGGGCTTCGATGTAC +
Preference number: 3 (lower is better)
Translates to: ASRVSSAVQPGC*CSLPVFRASMY
Trigger: GTACATCGAAGCCCTGAACACGGGCAAGCTGCAGCAGCAGCCTGGCTGCACTGCTGAGGAGACCCTGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
3UTR GCA 72 bp AGTGCCTCCAGGGTCTCCTCAGCAGTGCAGCCAGGCTaGTGCTGCAGCTTGCCCGTGTTCAGGGCTTCGATG +
Preference number: 3 (lower is better)
Translates to: SASRVSSAVQPG*CCSLPVFRASM
Trigger: CATCGAAGCCCTGAACACGGGCAAGCTGCAGCAGCAGCCTGGCTGCACTGCTGAGGAGACCCTGGAGGCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
3UTR-3UTR CAA 90 bp CACAGACTCCAGACCCTGCAGCGCCCAACTGAGTACTCACTCACGCAAGGTGAGACCCTCCCCTGGCCTTaGCACGGATCCCAGTGGTCC +
Preference number: 3 (lower is better)
Translates to: HRLQTLQRPTEYSLTQGETLPWP*HGSQWS
Trigger: GGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGT...CTCACCTTGCGTGAGTGAGTACTCAGTTGGGCGCTGCAGGGTCTGGAGTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR TCA 72 bp CTCCCGAGCAGCGTGGCACAGTCAGGGTCACTGGTGTaGGCTGCACCCTATCAGAGGAGAAGCTGCTCCTGG +
Preference number: 3 (lower is better)
Translates to: LPSSVAQSGSLV*AAPYQRRSCSW
Trigger: CCAGGAGCAGCTTCTCCTCTGATAGGGTGCAGCTCACACCAGTGACCCTGACTGTGCCACGCTGCTCGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR GCA 72 bp GGCTGTTGCTCTTGTCCAGCTCCCGGAGGCAGGCACTaGCAGCGTGGTCACGGATCACAGACAGCTCCTTCA +
Preference number: 3 (lower is better)
Translates to: GCCSCPAPGGRH*QRGHGSQTAPS
Trigger: TGAAGGAGCTGTCTGTGATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGAGCAACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
3UTR GCA 72 bp GAGCAGCGTGGCACAGTCAGGGTCACTGGTGTGAGCTaGACCCTATCAGAGGAGAAGCTGCTCCTGGGGATG +
Preference number: 3 (lower is better)
Translates to: EQRGTVRVTGVS*TLSEEKLLLGM
Trigger: CATCCCCAGGAGCAGCTTCTCCTCTGATAGGGTGCAGCTCACACCAGTGACCCTGACTGTGCCACGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR CCA 72 bp CTCTTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTaGTCACGGATCACAGACAGCTCCTTCAGGATCAGT +
Preference number: 3 (lower is better)
Translates to: LLSSSRRQALPA*SRITDSSFRIS
Trigger: ACTGATCCTGAAGGAGCTGTCTGTGATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
3UTR-3UTR CAA 90 bp GGCTGTTGCTCTTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATTCAGCAACTCATACTaGGCCTTCAGCAGTCCTTGG +
Preference number: 3 (lower is better)
Translates to: GCCSCPAPGGRHCQRGHGFSNSY*AFSSPW
Trigger: CCAAGGACTGCTGAAGGCCAAGTATGAGTTGCTGAA...TCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGAGCAACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
3UTR-3UTR CAA 90 bp CTTCCCCAGCCCACTGGCACTCCTCCCAGAAATGAAGTTTGGAAGCACAGGCCTCCAGGCTGGAGTGCATaGGCGCAATTTTGGCTCACC +
Preference number: 3 (lower is better)
Translates to: LPQPTGTPPRNEVWKHRPPGWSA*AQFWLT
Trigger: GGTGAGCCAAAATTGCGCCAATGCACTCCAGCCTGG...AGGCCTGTGCTTCCAAACTTCATTTCTGGGAGGAGTGCCAGTGGGCTGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR GCA 72 bp GCTGCACCCTATCAGAGGAGAAGCTGCTCCTGGGGATaGCAAGAGGGCTTCTCTGATTGCTGGCATAGGTGG +
Preference number: 3 (lower is better)
Translates to: AAPYQRRSCSWG*QEGFSDCWHRW
Trigger: CCACCTATGCCAGCAATCAGAGAAGCCCTCTTGGCATCCCCAGGAGCAGCTTCTCCTCTGATAGGGTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR GCA 72 bp CACTCCTATGATTCAATTCTACCCTCCCCTGGCCTTTaGACGGATCCCAGTGGTCCTGGCTCGGATCAGGCC +
Preference number: 3 (lower is better)
Translates to: HSYDSILPSPGL*TDPSGPGSDQA
Trigger: GGCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGAATTGAATCATAGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR GCA 72 bp GGTGATTATACCATGCTCCCTGACTCGGAGCTTTACTaGAGGCCACTCGGGTCAGGCCTGTTCCTCGGTGGT +
Preference number: 3 (lower is better)
Translates to: GDYTMLPDSELY*RPLGSGLFLGG
Trigger: ACCACCGAGGAACAGGCCTGACCCGAGTGGCCTGCAGTAAAGCTCCGAGTCAGGGAGCATGGTATAATCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR CCA 72 bp AATTCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTaGTCCTGGCTCGGATCAGGCCTACAGCTTACTTCC +
Preference number: 3 (lower is better)
Translates to: NSTLPWPLHGSQ*SWLGSGLQLTS
Trigger: GGAAGTAAGCTGTAGGCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGAATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR CCA 72 bp CTGCAGGCCACTCGGGTCAGGCCTGTTCCTCGGTGGTaGAACAGACTGCAAGGTACAAGAACAGGCTTCTTC +
Preference number: 3 (lower is better)
Translates to: LQATRVRPVPRW*NRLQGTRTGFF
Trigger: GAAGAAGCCTGTTCTTGTACCTTGCAGTCTGTTCCACCACCGAGGAACAGGCCTGACCCGAGTGGCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR TCA 72 bp GTGAAGACACCATGGGGAGCCGATGGATGTATGCAGTaGGCTGGGATGGACCATGACACCTGGCTGGGCTTT +
Preference number: 3 (lower is better)
Translates to: VKTPWGADGCMQ*AGMDHDTWLGF
Trigger: AAAGCCCAGCCAGGTGTCATGGTCCATCCCAGCTCACTGCATACATCCATCGGCTCCCCATGGTGTCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR TCA 72 bp CCGACTTCCCCAGCCCACTGGCACTCCTCCCAGAAATaGAGTTTGGAAGCACAGGCCTACTTAAGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: PTSPAHWHSSQK*SLEAQAYLRPG
Trigger: TCCAGGCCTTAAGTAGGCCTGTGCTTCCAAACTTCATTTCTGGGAGGAGTGCCAGTGGGCTGGGGAAGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR TCA 72 bp CCCGCAGAAGACAACAGGTGCCGGAGTTCACTCCTATaGTTCAATTCTACCCTCCCCTGGCCTTTGCACGGA +
Preference number: 3 (lower is better)
Translates to: PAEDNRCRSSLL*FNSTLPWPLHG
Trigger: TCCGTGCAAAGGCCAGGGGAGGGTAGAATTGAATCATAGGAGTGAACTCCGGCACCTGTTGTCTTCTGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR TCA 72 bp CAGTCCTTGGCCAGGTGTGACATCACCGATCCCAATTaGGAAACCACGGTTAGACAGGTAGACAGGAGCCAG +
Preference number: 3 (lower is better)
Translates to: QSLARCDITDPN*ETTVRQVDRSQ
Trigger: CTGGCTCCTGTCTACCTGTCTAACCGTGGTTTCTCAATTGGGATCGGTGATGTCACACCTGGCCAAGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
3UTR-3UTR CAA 90 bp TGGCTCTTCCCAGGTTACATGAGAACTGGTGATCTCGGTGGGGTCTCAAGTAGAGAATGGGTTTGGCTCTaGTCACAGGGTAGAGCCCCA +
Preference number: 3 (lower is better)
Translates to: WLFPGYMRTGDLGGVSSREWVWL*SQGRAP
Trigger: TGGGGCTCTACCCTGTGACAAGAGCCAAACCCATTC...TCTACTTGAGACCCCACCGAGATCACCAGTTCTCATGTAACCTGGGAAGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CAA 90 bp TGTGATTTACCTGTAACACCAGTGTCAGGTGATTATACCATGCTCCCTGACTCGTGGGGTGTCACCATGTaGGCCAGGCTGATCTCGAAC +
Preference number: 3 (lower is better)
Translates to: CDLPVTPVSGDYTMLPDSWGVTM*ARLISN
Trigger: GTTCGAGATCAGCCTGGCCAACATGGTGACACCCCA...CGAGTCAGGGAGCATGGTATAATCACCTGACACTGGTGTTACAGGTAAATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR TCA 72 bp GCTCCAAGGTCTGCCTTGTTCTCAAGTGCTATACGCTaGTTCGCACCCATCACAATCACACACGTCTCACAC +
Preference number: 3 (lower is better)
Translates to: APRSALFSSAIR*FAPITITHVSH
Trigger: GTGTGAGACGTGTGTGATTGTGATGGGTGCGAATCAGCGTATAGCACTTGAGAACAAGGCAGACCTTGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR GCA 72 bp GAGTACTCACTCACGCAAGGTGAGGCTCCTTGGCGGTaGCATCTTTATTATTCCCAGCCACAAGTTATAGCC +
Preference number: 3 (lower is better)
Translates to: EYSLTQGEAPWR*HLYYSQPQVIA
Trigger: GGCTATAACTTGTGGCTGGGAATAATAAAGATGGCACCGCCAAGGAGCCTCACCTTGCGTGAGTGAGTACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR CCA 72 bp CCAACTGAGTACTCACTCACGCAAGGTGAGGCTCCTTaGCGGTGCCATCTTTATTATTCCCAGCCACAAGTT +
Preference number: 3 (lower is better)
Translates to: PTEYSLTQGEAP*RCHLYYSQPQV
Trigger: AACTTGTGGCTGGGAATAATAAAGATGGCACCGCCAAGGAGCCTCACCTTGCGTGAGTGAGTACTCAGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR CCA 72 bp GCCTTTGAGCTCTGTGCTGGCATAAAGCCCAAGGCCTaGGCAGGGCAGATGATCAAAGTAGGGAGAATTTTA +
Preference number: 3 (lower is better)
Translates to: AFELCAGIKPKA*AGQMIKVGRIL
Trigger: TAAAATTCTCCCTACTTTGATCATCTGCCCTGCCCAGGCCTTGGGCTTTATGCCAGCACAGAGCTCAAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CAA 90 bp TGTTCCTCGGTGGTGGAACAGACTGCAAGGTACAAGAACAGGCTTCTTCTAGCCGTTGTTCCATACTCCTaGGCAGATTCCAGCTTCCAT +
Preference number: 3 (lower is better)
Translates to: CSSVVEQTARYKNRLLLAVVPYS*ADSSFH
Trigger: ATGGAAGCTGGAATCTGCCAAGGAGTATGGAACAAC...GGCTAGAAGAAGCCTGTTCTTGTACCTTGCAGTCTGTTCCACCACCGAGGAACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR TCA 72 bp CAGAGACTCAAATGTAACCCTTTGAGCTCTCATGCTTaGGGATGTGCTGCTACCTGGCCTTTGAGCTCTGTG +
Preference number: 3 (lower is better)
Translates to: QRLKCNPLSSHA*GCAATWPLSSV
Trigger: CACAGAGCTCAAAGGCCAGGTAGCAGCACATCCTCAAGCATGAGAGCTCAAAGGGTTACATTTGAGTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR TCA 72 bp CTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTaGGCTCTCATGCTTGAGGATGTGCTGCTACCTGGC +
Preference number: 3 (lower is better)
Translates to: LPSRYRDSNVTL*ALMLEDVLLPG
Trigger: GCCAGGTAGCAGCACATCCTCAAGCATGAGAGCTCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR GCA 72 bp GAAGATGTTACAGAGCTGCCTGGGCCTCATGACAGTTaGACCTCAGTTACAAATCCCAGACGGCTCTATTTG +
Preference number: 3 (lower is better)
Translates to: EDVTELPGPHDS*TSVTNPRRLYL
Trigger: CAAATAGAGCCGTCTGGGATTTGTAACTGAGGTGCAACTGTCATGAGGCCCAGGCAGCTCTGTAACATCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR GCA 72 bp CAAGTTATAGCCACAACCTCTCTTCCATTTAAAGTGTaGGTCACCCGCAGAAGACAACAGGTGCCGGAGTTC +
Preference number: 3 (lower is better)
Translates to: QVIATTSLPFKV*VTRRRQQVPEF
Trigger: GAACTCCGGCACCTGTTGTCTTCTGCGGGTGACGCACACTTTAAATGGAAGAGAGGTTGTGGCTATAACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CAA 90 bp TGTTCCTCGGTGGTGGAACAGACTGCAAGGTACAAGAACAGGCTTCTTCTAGCCTTAGGACGAGTTCATTaGGCTGGTGAGTTGTTCCAT +
Preference number: 3 (lower is better)
Translates to: CSSVVEQTARYKNRLLLALGRVH*AGELFH
Trigger: ATGGAACAACTCACCAGCCAAATGAACTCGTCCTAA...GGCTAGAAGAAGCCTGTTCTTGTACCTTGCAGTCTGTTCCACCACCGAGGAACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR CCA 72 bp CGAGTTCATTTGGCTGGTGAGTTGTTCCATACTCCTTaGCAGATTCCAGCTTCCATGACTACCATCCTGCTT +
Preference number: 3 (lower is better)
Translates to: RVHLAGELFHTP*QIPASMTTILL
Trigger: AAGCAGGATGGTAGTCATGGAAGCTGGAATCTGCCAAGGAGTATGGAACAACTCACCAGCCAAATGAACTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR-3UTR CAA 90 bp TTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTGAGCTCTCATCGGGGTTTCGTCATGTaGCCCAGGCTGCTCTCGAAC +
Preference number: 3 (lower is better)
Translates to: FISSKQVQRLKCNPLSSHRGFVM*PRLLSN
Trigger: GTTCGAGAGCAGCCTGGGCAACATGACGAAACCCCG...ATGAGAGCTCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CAA 90 bp TACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGACATAAGTATGTCACATaGAGAGATTCCAGCATGACC +
Preference number: 3 (lower is better)
Translates to: YQAMLLMLIVLARLAVPGHKYVT*RDSSMT
Trigger: GGTCATGCTGGAATCTCTCAATGTGACATACTTATG...TCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CAA 90 bp ACAGTGGGGAGCACAAACAGTAGGGTTTACCAGGCAATGCTGTTGATGTTGATACCCAGACGGCTCTATTaGCTTAAACCAGTTTTTCCA +
Preference number: 3 (lower is better)
Translates to: TVGSTNSRVYQAMLLMLIPRRLY*LKPVFP
Trigger: TGGAAAAACTGGTTTAAGCAAATAGAGCCGTCTGGG...TATCAACATCAACAGCATTGCCTGGTAAACCCTACTGTTTGTGCTCCCCACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR-3UTR CAA 90 bp TCACACGTATTTTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTGCTCCAAGGTCTGCCTaGTTCTCAAGTGCTATACGC +
Preference number: 3 (lower is better)
Translates to: SHVFLFLPSRYRDSNVTLAPRSA*FSSAIR
Trigger: GCGTATAGCACTTGAGAACAAGGCAGACCTTGGAGC...AAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAAAATACGTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
3UTR TCA 72 bp CCAGACGGCTCTATTTGCTTAAACCAGTTTTTCCAGTaGCGCTTACATGCTGACTTTCTTGGTTTCTATAGA +
Preference number: 3 (lower is better)
Translates to: PDGSICLNQFFQ*RLHADFLGFYR
Trigger: TCTATAGAAACCAAGAAAGTCAGCATGTAAGCGTCACTGGAAAAACTGGTTTAAGCAAATAGAGCCGTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATCACAGACAGCCAGCCAGGCTGCTGCTaGAGCTTGCCCGTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LSSSRRQALPAWSRITDSQPGCC*SLPVFR
Trigger: CCTGAACACGGGCAAGCTGCAGCAGCAGCCTGGCTG...GCTGTCTGTGATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR GCA 90 bp TCTTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATCACAGACAGTGCAGCCAGGCTGCTaGTGCAGCTTGCCCGTGTTC +
Preference number: 4 (lower is better)
Translates to: SCPAPGGRHCQRGHGSQTVQPGC*CSLPVF
Trigger: GAACACGGGCAAGCTGCAGCAGCAGCCTGGCTGCAC...TGTCTGTGATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR GCA 90 bp TCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGCTCGGATCAGGCGAGCCACTGATGGCCTaGTGTCCCACACAGGCAATC +
Preference number: 4 (lower is better)
Translates to: STLPWPLHGSQWSWLGSGEPLMA*CPTQAI
Trigger: GATTGCCTGTGTGGGACAGCAGGCCATCAGTGGCTC...GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp CTTCCCCAGCCCACTGGCACTCCTCCCAGAAATGAAGTTTGGAAGCACAGGCCTGGGGCACGCCCAGGGTaGTGTTCATGGAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: LPQPTGTPPRNEVWKHRPGARPG*CSWRPH
Trigger: GTGTGGCCTCCATGAACATCACCCTGGGCGTGCCCC...AGGCCTGTGCTTCCAAACTTCATTTCTGGGAGGAGTGCCAGTGGGCTGGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR TCA 90 bp GGAGCTTTACTGCAGGCCACTCGGGTCAGGCCTGTTCCTCGGTGGTGGAACAGACACCGTGTGTGGCCATaGCTGCCCGCAGGTTATCAC +
Preference number: 4 (lower is better)
Translates to: GALLQATRVRPVPRWWNRHRVWP*LPAGYH
Trigger: GTGATAACCTGCGGGCAGTCATGGCCACACACGGTG...TCTGTTCCACCACCGAGGAACAGGCCTGACCCGAGTGGCCTGCAGTAAAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR GCA 90 bp CACTGGTGTGAGCTGCACCCTATCAGAGGAGAAGCTGCTCCTGGGGATGCCAAGCACCATGATGACCGCTaGCGGGACGCCTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: HWCELHPIRGEAAPGDAKHHDDR*RDASLA
Trigger: TGCCAAGGAGGCGTCCCGGCAGCGGTCATCATGGTG...CTTGGCATCCCCAGGAGCAGCTTCTCCTCTGATAGGGTGCAGCTCACACCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATCACAGACAGCTTGTGCAGCGAGGGCTaGCGATTGAACAGCACCACA +
Preference number: 4 (lower is better)
Translates to: LSSSRRQALPAWSRITDSLCSEG*RLNSTT
Trigger: TGTGGTGCTGTTCAATCGGCAGCCCTCGCTGCACAA...GCTGTCTGTGATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR GCA 90 bp TCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGCTCGGATCAGGCCCTTTGCCACAGTACTaGTTGCCCTTGGTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: STLPWPLHGSQWSWLGSGPLPQY*LPLVRR
Trigger: CCTGCGAACCAAGGGCAAGCAGTACTGTGGCAAAGG...GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp CAGCCAGGCTGCTGCTGCAGCTTGCCCGTGTTCAGGGCTTCGATGTACTCATCAGGGTCTCCTCAGCAGTaGAGCCAGGCTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: QPGCCCSLPVFRASMYSSGSPQQ*SQAAAA
Trigger: TGCAGCAGCAGCCTGGCTGCACTGCTGAGGAGACCC...TGATGAGTACATCGAAGCCCTGAACACGGGCAAGCTGCAGCAGCAGCCTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR GCA 90 bp ACCATGCTCCCTGACTCGGAGCTTTACTGCAGGCCACTCGGGTCAGGCCTGTTCTGGAGGTGGTTCGGGTaGCCTTCACACCGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: TMLPDSELYCRPLGSGLFWRWFG*PSHRVW
Trigger: CCACACACGGTGTGAAGGGCACCCGAACCACCTCCA...GAACAGGCCTGACCCGAGTGGCCTGCAGTAAAGCTCCGAGTCAGGGAGCATGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp TCTTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATCACAGACAAATCTGAAGGTCCGGTaGGGCTTGACCCTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: SCPAPGGRHCQRGHGSQTNLKVR*GLTLAR
Trigger: TCTGGCCAGGGTCAAGCCCCACCGGACCTTCAGATT...TGTCTGTGATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR TCA 90 bp TCTTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATCACAGACAGTCCTTGGCCAGGTGTaGCATCACCGATCCCAATTG +
Preference number: 4 (lower is better)
Translates to: SCPAPGGRHCQRGHGSQTVLGQV*HHRSQL
Trigger: CAATTGGGATCGGTGATGTCACACCTGGCCAAGGAC...TGTCTGTGATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR TCA 90 bp TCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGCTCGGATCAGGCTTGAGCTCTCATGCTTaGGGATGTGCTGCTACCTGG +
Preference number: 4 (lower is better)
Translates to: STLPWPLHGSQWSWLGSGLSSHA*GCAATW
Trigger: CCAGGTAGCAGCACATCCTCAAGCATGAGAGCTCAA...GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp CAGCCAGGCTGCTGCTGCAGCTTGCCCGTGTTCAGGGCTTCGATGTACTCATCAGCTGCTGCTGCAGCTTaGCCGTGTTCAGGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: QPGCCCSLPVFRASMYSSAAAAA*PCSGLR
Trigger: TCGAAGCCCTGAACACGGGCAAGCTGCAGCAGCAGC...TGATGAGTACATCGAAGCCCTGAACACGGGCAAGCTGCAGCAGCAGCCTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR GCA 90 bp TGGCTCATCGTCAGGTGTGAAGACACCATGGGGAGCCGATGGATGTATGCAGTGCCCGGAGGCAGGCACTaGCAGCGTGGTCACGGATCA +
Preference number: 4 (lower is better)
Translates to: WLIVRCEDTMGSRWMYAVPGGRH*QRGHGS
Trigger: TGATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGG...CACTGCATACATCCATCGGCTCCCCATGGTGTCTTCACACCTGACGATGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp ACCATGCTCCCTGACTCGGAGCTTTACTGCAGGCCACTCGGGTCAGGCCTGTTCTGGACACCTCTGGAATaGCCTGCACCACCACCTTGG +
Preference number: 4 (lower is better)
Translates to: TMLPDSELYCRPLGSGLFWTPLE*PAPPPW
Trigger: CCAAGGTGGTGGTGCAGGGCATTCCAGAGGTGTCCA...GAACAGGCCTGACCCGAGTGGCCTGCAGTAAAGCTCCGAGTCAGGGAGCATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR GCA 90 bp CACTGGTGTGAGCTGCACCCTATCAGAGGAGAAGCTGCTCCTGGGGATGCCAAGTGGAGGTGGTTCGGGTaGCCTTCACACCGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: HWCELHPIRGEAAPGDAKWRWFG*PSHRVW
Trigger: CCACACACGGTGTGAAGGGCACCCGAACCACCTCCA...CTTGGCATCCCCAGGAGCAGCTTCTCCTCTGATAGGGTGCAGCTCACACCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGCTCGGATCAGGCTGCTTGAGGATGTGCTaGTACCTGGCCTTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: STLPWPLHGSQWSWLGSGCLRMC*YLAFEL
Trigger: GAGCTCAAAGGCCAGGTAGCAGCACATCCTCAAGCA...GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp CACAGACTCCAGACCCTGCAGCGCCCAACTGAGTACTCACTCACGCAAGGTGAGCAGGCACTGCCAGCGTaGTCACGGATCACAGACAGC +
Preference number: 4 (lower is better)
Translates to: HRLQTLQRPTEYSLTQGEQALPA*SRITDS
Trigger: GCTGTCTGTGATCCGTGACCACGCTGGCAGTGCCTG...CTCACCTTGCGTGAGTGAGTACTCAGTTGGGCGCTGCAGGGTCTGGAGTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GGAGCTTTACTGCAGGCCACTCGGGTCAGGCCTGTTCCTCGGTGGTGGAACAGAAGCTCTGGACACCTCTaGAATGCCCTGCACCACCAC +
Preference number: 4 (lower is better)
Translates to: GALLQATRVRPVPRWWNRSSGHL*NALHHH
Trigger: GTGGTGGTGCAGGGCATTCCAGAGGTGTCCAGAGCT...TCTGTTCCACCACCGAGGAACAGGCCTGACCCGAGTGGCCTGCAGTAAAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR TCA 90 bp GGCTGTTGCTCTTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGAACCTCAGGGCCGTTTTaGACCAGTTTCCTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: GCCSCPAPGGRHCQRGHGTSGPF*TSFLKK
Trigger: TTTCTTGAGGAAACTGGTTCAAAACGGCCCTGAGGT...TCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGAGCAACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR TCA 90 bp TACTTGGCCTTCAGCAGTCCTTGGCCAGGTGTGACATCACCGATCCCAATTGAGAGGTCCGGTGGGGCTTaGCCCTGGCCAGATGAGCCA +
Preference number: 4 (lower is better)
Translates to: YLAFSSPWPGVTSPIPIERSGGA*PWPDEP
Trigger: TGGCTCATCTGGCCAGGGTCAAGCCCCACCGGACCT...CTCAATTGGGATCGGTGATGTCACACCTGGCCAAGGACTGCTGAAGGCCAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR GCA 90 bp CACAGACTCCAGACCCTGCAGCGCCCAACTGAGTACTCACTCACGCAAGGTGAGCTCACAACTTGGATGTaGGCCTGCTGGCGCATCTCC +
Preference number: 4 (lower is better)
Translates to: HRLQTLQRPTEYSLTQGELTTWM*ACWRIS
Trigger: GGAGATGCGCCAGCAGGCGCACATCCAAGTTGTGAG...CTCACCTTGCGTGAGTGAGTACTCAGTTGGGCGCTGCAGGGTCTGGAGTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGCTCGGATCAGGCATTCAAGTTTTCCTGTaGCCTTCCCAGCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: STLPWPLHGSQWSWLGSGIQVFL*PSQQRL
Trigger: GAGCCTCTGCTGGGAAGGGCACAGGAAAACTTGAAT...GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGCTCGGATCAGGCCTGCTGAATGAAGTTTaGTCCTGGGTGAACCTCAGG +
Preference number: 4 (lower is better)
Translates to: STLPWPLHGSQWSWLGSGLLNEV*SWVNLR
Trigger: CCTGAGGTTCACCCAGGAGCAAACTTCATTCAGCAG...GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp CTGTTGCTCTTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATCCTGCTGAATGAAGTTTaGTCCTGGGTGAACCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLLLSSSRRQALPAWSRILLNEV*SWVNLR
Trigger: CCTGAGGTTCACCCAGGAGCAAACTTCATTCAGCAG...GATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGAGCAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR GCA 90 bp TGGCTCATCGTCAGGTGTGAAGACACCATGGGGAGCCGATGGATGTATGCAGTGCAGCCAGGCTGCTGCTaGAGCTTGCCCGTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: WLIVRCEDTMGSRWMYAVQPGCC*SLPVFR
Trigger: CCTGAACACGGGCAAGCTGCAGCAGCAGCCTGGCTG...CACTGCATACATCCATCGGCTCCCCATGGTGTCTTCACACCTGACGATGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp CACAGACTCCAGACCCTGCAGCGCCCAACTGAGTACTCACTCACGCAAGGTGAGTGCCTGGCTCACCAATaGTCTGGGCACACAGAGCAC +
Preference number: 4 (lower is better)
Translates to: HRLQTLQRPTEYSLTQGECLAHQ*SGHTEH
Trigger: GTGCTCTGTGTGCCCAGAGCATTGGTGAGCCAGGCA...CTCACCTTGCGTGAGTGAGTACTCAGTTGGGCGCTGCAGGGTCTGGAGTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGCTCGGATCAGGCCATGGAGGCCACACCTaGAAAGTGGAAAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: STLPWPLHGSQWSWLGSGHGGHT*KVESLQ
Trigger: CTGAAGACTTTCCACTTTGCAGGTGTGGCCTCCATG...GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TGGCTCATCGTCAGGTGTGAAGACACCATGGGGAGCCGATGGATGTATGCAGTGCAGGGAAGCAGTGTGTaGACGAGCTGTGGGGCCGTC +
Preference number: 4 (lower is better)
Translates to: WLIVRCEDTMGSRWMYAVQGSSV*TSCGAV
Trigger: GACGGCCCCACAGCTCGTGCACACACTGCTTCCCTG...CACTGCATACATCCATCGGCTCCCCATGGTGTCTTCACACCTGACGATGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGCTCGGATCAGGCTGGGACAGCATGATGTaGCAGCAGGTTTTGCAGATC +
Preference number: 4 (lower is better)
Translates to: STLPWPLHGSQWSWLGSGWDSMM*QQVLQI
Trigger: GATCTGCAAAACCTGCTGCCACATCATGCTGTCCCA...GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp CTGTTGCTCTTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATCAATGAAGTTTGCTCCTaGGTGAACCTCAGGGCCGTT +
Preference number: 4 (lower is better)
Translates to: LLLLSSSRRQALPAWSRINEVCS*VNLRAV
Trigger: AACGGCCCTGAGGTTCACCCAGGAGCAAACTTCATT...GATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGAGCAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR CCA 90 bp ACCATGCTCCCTGACTCGGAGCTTTACTGCAGGCCACTCGGGTCAGGCCTGTTCGTCTTCAGGGTCATCTaGGTGCCTGGCTCACCAATG +
Preference number: 4 (lower is better)
Translates to: TMLPDSELYCRPLGSGLFVFRVI*VPGSPM
Trigger: CATTGGTGAGCCAGGCACCCAGATGACCCTGAAGAC...GAACAGGCCTGACCCGAGTGGCCTGCAGTAAAGCTCCGAGTCAGGGAGCATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp TCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGCTCGGATCAGGCATAAAGCCCAAGGCCTaGGCAGGGCAGATGATCAAA +
Preference number: 4 (lower is better)
Translates to: STLPWPLHGSQWSWLGSGIKPKA*AGQMIK
Trigger: TTTGATCATCTGCCCTGCCCAGGCCTTGGGCTTTAT...GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp TCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGCTCGGATCAGGCAGAATTTTGGCCACATaGACTGGCACAGCTACCTCA +
Preference number: 4 (lower is better)
Translates to: STLPWPLHGSQWSWLGSGRILAT*TGTATS
Trigger: TGAGGTAGCTGTGCCAGTTCATGTGGCCAAAATTCT...GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp TTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATCACAGACAGCCCAGTATTGAAGCAATaGTTTGGCAAGCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LSSSRRQALPAWSRITDSPVLKQ*FGKPWL
Trigger: GAGCCAAGGCTTGCCAAATCATTGCTTCAATACTGG...GCTGTCTGTGATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR TCA 90 bp TTCCATTTAAAGTGTGCGTCACCCGCAGAAGACAACAGGTGCCGGAGTTCACTCGGGGCACGCCCAGGGTaGTGTTCATGGAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: FHLKCASPAEDNRCRSSLGARPG*CSWRPH
Trigger: GTGTGGCCTCCATGAACATCACCCTGGGCGTGCCCC...GAGTGAACTCCGGCACCTGTTGTCTTCTGCGGGTGACGCACACTTTAAATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp CACTGGTGTGAGCTGCACCCTATCAGAGGAGAAGCTGCTCCTGGGGATGCCAAGCACCCTTGTAGGTCATaGGGTCGGAGAGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: HWCELHPIRGEAAPGDAKHPCRS*GRRAAS
Trigger: TGATGCTGCTCTCCGACCTCATGACCTACAAGGGTG...CTTGGCATCCCCAGGAGCAGCTTCTCCTCTGATAGGGTGCAGCTCACACCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp TGGCTCATCGTCAGGTGTGAAGACACCATGGGGAGCCGATGGATGTATGCAGTGGGCCCCAAACTCCAGTaGGGCTTCCATAGGCCATGG +
Preference number: 4 (lower is better)
Translates to: WLIVRCEDTMGSRWMYAVGPKLQ*GFHRPW
Trigger: CCATGGCCTATGGAAGCCTCACTGGAGTTTGGGGCC...CACTGCATACATCCATCGGCTCCCCATGGTGTCTTCACACCTGACGATGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp CACAGACTCCAGACCCTGCAGCGCCCAACTGAGTACTCACTCACGCAAGGTGAGTGCCACAGTACTGCTTaGCCTTGGTTCGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: HRLQTLQRPTEYSLTQGECHSTA*PWFAGW
Trigger: CCAACCTGCGAACCAAGGGCAAGCAGTACTGTGGCA...CTCACCTTGCGTGAGTGAGTACTCAGTTGGGCGCTGCAGGGTCTGGAGTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp GGCTGTTGCTCTTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATTCCTTTGTCCATGCTaGCACTCATCAACTCACTGT +
Preference number: 4 (lower is better)
Translates to: GCCSCPAPGGRHCQRGHGFLCPC*HSSTHC
Trigger: ACAGTGAGTTGATGAGTGGCAGCATGGACAAAGGAA...TCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGAGCAACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR GCA 90 bp TCTTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATCACAGACAGGGTTCCTTTGTCCATaGTGCCACTCATCAACTCAC +
Preference number: 4 (lower is better)
Translates to: SCPAPGGRHCQRGHGSQTGFLCP*CHSSTH
Trigger: GTGAGTTGATGAGTGGCAGCATGGACAAAGGAACCC...TGTCTGTGATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR GCA 90 bp GCTTGCCCGTGTTCAGGGCTTCGATGTACTCATCACATTTCTTGTAGCCGGCATGCAGTGCAGCCAGGCTaGTGCTGCAGCTTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: ACPCSGLRCTHHISCSRHAVQPG*CCSLPV
Trigger: CACGGGCAAGCTGCAGCAGCAGCCTGGCTGCACTGC...ATGCCGGCTACAAGAAATGTGATGAGTACATCGAAGCCCTGAACACGGGCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR GCA 90 bp CACTGGTGTGAGCTGCACCCTATCAGAGGAGAAGCTGCTCCTGGGGATGCCAAGGTGTGTGGCCATGACTaGCCGCAGGTTATCACCTTC +
Preference number: 4 (lower is better)
Translates to: HWCELHPIRGEAAPGDAKVCGHD*PQVITF
Trigger: GAAGGTGATAACCTGCGGGCAGTCATGGCCACACAC...CTTGGCATCCCCAGGAGCAGCTTCTCCTCTGATAGGGTGCAGCTCACACCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp CACAGACTCCAGACCCTGCAGCGCCCAACTGAGTACTCACTCACGCAAGGTGAGGTTGGACGAAGCCTCTaGTCCACTTCTTGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: HRLQTLQRPTEYSLTQGEVGRSL*STSWVP
Trigger: TGGCACCCAAGAAGTGGACCAGAGGCTTCGTCCAAC...CTCACCTTGCGTGAGTGAGTACTCAGTTGGGCGCTGCAGGGTCTGGAGTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TCTTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATCACAGACATCAGCAACTCATACTTaGCCTTCAGCAGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SCPAPGGRHCQRGHGSQTSATHT*PSAVLG
Trigger: GCCAAGGACTGCTGAAGGCCAAGTATGAGTTGCTGA...TGTCTGTGATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR CCA 90 bp ACCATGCTCCCTGACTCGGAGCTTTACTGCAGGCCACTCGGGTCAGGCCTGTTCAGGTGTTATTGGAGGTaGTTCGGGTGCCCTTCACAC +
Preference number: 4 (lower is better)
Translates to: TMLPDSELYCRPLGSGLFRCYWR*FGCPSH
Trigger: GTGTGAAGGGCACCCGAACCACCTCCAATAACACCT...GAACAGGCCTGACCCGAGTGGCCTGCAGTAAAGCTCCGAGTCAGGGAGCATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp GGAGCTTTACTGCAGGCCACTCGGGTCAGGCCTGTTCCTCGGTGGTGGAACAGATCGATGCTCATGCCGTaGTTCACCATGGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: GALLQATRVRPVPRWWNRSMLMP*FTMVYW
Trigger: CCAGTACACCATGGTGAACCACGGCATGAGCATCGA...TCTGTTCCACCACCGAGGAACAGGCCTGACCCGAGTGGCCTGCAGTAAAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp TTCCATTTAAAGTGTGCGTCACCCGCAGAAGACAACAGGTGCCGGAGTTCACTCGTGCCCTGGCCTGTGTaGGGCTCAGGCCTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: FHLKCASPAEDNRCRSSLVPWPV*GSGLAH
Trigger: ATGAGCCAGGCCTGAGCCCCACACAGGCCAGGGCAC...GAGTGAACTCCGGCACCTGTTGTCTTCTGCGGGTGACGCACACTTTAAATGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GGAGCTTTACTGCAGGCCACTCGGGTCAGGCCTGTTCCTCGGTGGTGGAACAGAGATGAGACTCGGGTCTaGATACACTGGGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GALLQATRVRPVPRWWNRDETRV*IHWALF
Trigger: GAAGAGAGCCCAGTGTATCCAGACCCGAGTCTCATC...TCTGTTCCACCACCGAGGAACAGGCCTGACCCGAGTGGCCTGCAGTAAAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR TCA 90 bp GTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAGGAGGACCAGCACCTCTTGGGTGCCATGTTaGGGGGAATGCCCGAGAGCT +
Preference number: 4 (lower is better)
Translates to: VDVDSPSKAGSSRRRTSTSWVPC*GECPRA
Trigger: AGCTCTCGGGCATTCCCCTCAACATGGCACCCAAGA...GGTGCTGGTCCTCCTCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp CTGTTGCTCTTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATCCGATGTCACCATACTTaGGCTCTTGAGCCATCTTTT +
Preference number: 4 (lower is better)
Translates to: LLLLSSSRRQALPAWSRIRCHHT*ALEPSF
Trigger: AAAAGATGGCTCAAGAGCTCAAGTATGGTGACATCG...GATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGAGCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR TCA 90 bp TCTTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATCACAGACAATCACCGATCCCAATTaGGAAACCACGGTTAGACAG +
Preference number: 4 (lower is better)
Translates to: SCPAPGGRHCQRGHGSQTITDPN*ETTVRQ
Trigger: CTGTCTAACCGTGGTTTCTCAATTGGGATCGGTGAT...TGTCTGTGATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR TCA 90 bp TGGCTCATCGTCAGGTGTGAAGACACCATGGGGAGCCGATGGATGTATGCAGTGTCAGGGTCACTGGTGTaGGCTGCACCCTATCAGAGG +
Preference number: 4 (lower is better)
Translates to: WLIVRCEDTMGSRWMYAVSGSLV*AAPYQR
Trigger: CCTCTGATAGGGTGCAGCTCACACCAGTGACCCTGA...CACTGCATACATCCATCGGCTCCCCATGGTGTCTTCACACCTGACGATGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATCACAGACAGCCGGGGTTACAAGATTTaGTTTAGTCCCCATCAGAAC +
Preference number: 4 (lower is better)
Translates to: LSSSRRQALPAWSRITDSRGYKI*FSPHQN
Trigger: GTTCTGATGGGGACTAAAGCAAATCTTGTAACCCCG...GCTGTCTGTGATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR GCA 90 bp CACAGACTCCAGACCCTGCAGCGCCCAACTGAGTACTCACTCACGCAAGGTGAGGTCACTGGTGTGAGCTaGACCCTATCAGAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: HRLQTLQRPTEYSLTQGEVTGVS*TLSEEK
Trigger: CTTCTCCTCTGATAGGGTGCAGCTCACACCAGTGAC...CTCACCTTGCGTGAGTGAGTACTCAGTTGGGCGCTGCAGGGTCTGGAGTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp CCCGTCCCAGGGAGCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGACCCTCCCCTGGCCTTTaGACGGATCCCAGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: PVPGSTKLFIHQLETGQGPSPGL*TDPSGP
Trigger: AGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGG...TCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGCTCCCTGGGACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGCTCGGATCAGGCCTTCCATTTAAAGTGTaGGTCACCCGCAGAAGACAA +
Preference number: 4 (lower is better)
Translates to: STLPWPLHGSQWSWLGSGLPFKV*VTRRRQ
Trigger: TTGTCTTCTGCGGGTGACGCACACTTTAAATGGAAG...GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGCTCGGATCAGGCTTTGGCCACATGAACTaGCACAGCTACCTCATCAAT +
Preference number: 4 (lower is better)
Translates to: STLPWPLHGSQWSWLGSGFGHMN*HSYLIN
Trigger: ATTGATGAGGTAGCTGTGCCAGTTCATGTGGCCAAA...GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TACTTGGCCTTCAGCAGTCCTTGGCCAGGTGTGACATCACCGATCCCAATTGAGCAGGCACTGCCAGCGTaGTCACGGATCACAGACAGC +
Preference number: 4 (lower is better)
Translates to: YLAFSSPWPGVTSPIPIEQALPA*SRITDS
Trigger: GCTGTCTGTGATCCGTGACCACGCTGGCAGTGCCTG...CTCAATTGGGATCGGTGATGTCACACCTGGCCAAGGACTGCTGAAGGCCAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR CCA 90 bp TGGCTCATCGTCAGGTGTGAAGACACCATGGGGAGCCGATGGATGTATGCAGTGGGCTCACCAATGCTCTaGGCACACAGAGCACCCACT +
Preference number: 4 (lower is better)
Translates to: WLIVRCEDTMGSRWMYAVGSPML*AHRAPT
Trigger: AGTGGGTGCTCTGTGTGCCCAGAGCATTGGTGAGCC...CACTGCATACATCCATCGGCTCCCCATGGTGTCTTCACACCTGACGATGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GGAGCTTTACTGCAGGCCACTCGGGTCAGGCCTGTTCCTCGGTGGTGGAACAGAGCCACACCTGCAAAGTaGAAAGTCTTCAGGGTCATC +
Preference number: 4 (lower is better)
Translates to: GALLQATRVRPVPRWWNRATPAK*KVFRVI
Trigger: GATGACCCTGAAGACTTTCCACTTTGCAGGTGTGGC...TCTGTTCCACCACCGAGGAACAGGCCTGACCCGAGTGGCCTGCAGTAAAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp TGGCTCATCGTCAGGTGTGAAGACACCATGGGGAGCCGATGGATGTATGCAGTGAGCTCTGGACACCTCTaGAATGCCCTGCACCACCAC +
Preference number: 4 (lower is better)
Translates to: WLIVRCEDTMGSRWMYAVSSGHL*NALHHH
Trigger: GTGGTGGTGCAGGGCATTCCAGAGGTGTCCAGAGCT...CACTGCATACATCCATCGGCTCCCCATGGTGTCTTCACACCTGACGATGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp CACTGGTGTGAGCTGCACCCTATCAGAGGAGAAGCTGCTCCTGGGGATGCCAAGATGGACCATGACACCTaGCTGGGCTTTAAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HWCELHPIRGEAAPGDAKMDHDT*LGFKSR
Trigger: CCTGGACTTAAAGCCCAGCCAGGTGTCATGGTCCAT...CTTGGCATCCCCAGGAGCAGCTTCTCCTCTGATAGGGTGCAGCTCACACCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp CACTGGTGTGAGCTGCACCCTATCAGAGGAGAAGCTGCTCCTGGGGATGCCAAGGTAGTGGCACGATCTTaGCTCACTACAACCTCCACC +
Preference number: 4 (lower is better)
Translates to: HWCELHPIRGEAAPGDAKVVARS*LTTTST
Trigger: GGTGGAGGTTGTAGTGAGCCAAGATCGTGCCACTAC...CTTGGCATCCCCAGGAGCAGCTTCTCCTCTGATAGGGTGCAGCTCACACCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp CAGCCAGGCTGCTGCTGCAGCTTGCCCGTGTTCAGGGCTTCGATGTACTCATCATGCGTATGTCTCTGCTaGATGAAGTTTGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QPGCCCSLPVFRASMYSSCVCLC*MKFAPG
Trigger: CCCAGGAGCAAACTTCATTCAGCAGAGACATACGCA...TGATGAGTACATCGAAGCCCTGAACACGGGCAAGCTGCAGCAGCAGCCTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR TCA 90 bp CCCGTCCCAGGGAGCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGAGCTCATCGTCAGGTGTaGAGACACCATGGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: PVPGSTKLFIHQLETGQGAHRQV*RHHGEP
Trigger: CGGCTCCCCATGGTGTCTTCACACCTGACGATGAGC...TCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGCTCCCTGGGACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp TTACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGCTCACTCACGCAAGGTaGGGCTCCTTGGCGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LPGNAVDVDSPSKAGSSRLTHAR*GSLAVP
Trigger: TGGCACCGCCAAGGAGCCTCACCTTGCGTGAGTGAG...CCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp GGAGCTTTACTGCAGGCCACTCGGGTCAGGCCTGTTCCTCGGTGGTGGAACAGACCTGCTTCTCTTTTCTaGGTGTGGACTATCCACCTT +
Preference number: 4 (lower is better)
Translates to: GALLQATRVRPVPRWWNRPASLF*VWTIHL
Trigger: AAGGTGGATAGTCCACACTCAGAAAAGAGAAGCAGG...TCTGTTCCACCACCGAGGAACAGGCCTGACCCGAGTGGCCTGCAGTAAAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR TCA 90 bp CTTCCCCAGCCCACTGGCACTCCTCCCAGAAATGAAGTTTGGAAGCACAGGCCTCACTCCTCCCAGAAATaGAGTTTGGAAGCACAGGCC +
Preference number: 4 (lower is better)
Translates to: LPQPTGTPPRNEVWKHRPHSSQK*SLEAQA
Trigger: GGCCTGTGCTTCCAAACTTCATTTCTGGGAGGAGTG...AGGCCTGTGCTTCCAAACTTCATTTCTGGGAGGAGTGCCAGTGGGCTGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR GCA 90 bp TGGCTCTTCCCAGGTTACATGAGAACTGGTGATCTCGGTGGGGTCTCAAGTAGAGCTGCTGCTGCAGCTTaGCCGTGTTCAGGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: WLFPGYMRTGDLGGVSSRAAAAA*PCSGLR
Trigger: TCGAAGCCCTGAACACGGGCAAGCTGCAGCAGCAGC...TCTACTTGAGACCCCACCGAGATCACCAGTTCTCATGTAACCTGGGAAGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp CAGCAACTCATACTTGGCCTTCAGCAGTCCTTGGCCAGGTGTGACATCACCGATCTCCTTCAGGATCAGTaGCTCCAGGGTCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: QQLILGLQQSLARCDITDLLQDQ*LQGLLS
Trigger: GCTGAGGAGACCCTGGAGGCACTGATCCTGAAGGAG...ATCGGTGATGTCACACCTGGCCAAGGACTGCTGAAGGCCAAGTATGAGTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR GCA 90 bp CCAGTGTCAGGTGATTATACCATGCTCCCTGACTCGGAGCTTTACTGCAGGCCAACCTCTGGAATGCCCTaGACCACCACCTTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: PVSGDYTMLPDSELYCRPTSGMP*TTTLGR
Trigger: TCTCCCCAAGGTGGTGGTGCAGGGCATTCCAGAGGT...TGGCCTGCAGTAAAGCTCCGAGTCAGGGAGCATGGTATAATCACCTGACACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR GCA 90 bp GGAGCTTTACTGCAGGCCACTCGGGTCAGGCCTGTTCCTCGGTGGTGGAACAGACAGGTGATTATACCATaGTCCCTGACTCGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: GALLQATRVRPVPRWWNRQVIIP*SLTRSF
Trigger: AAAGCTCCGAGTCAGGGAGCATGGTATAATCACCTG...TCTGTTCCACCACCGAGGAACAGGCCTGACCCGAGTGGCCTGCAGTAAAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp CACTGGTGTGAGCTGCACCCTATCAGAGGAGAAGCTGCTCCTGGGGATGCCAAGCCCACAGGTTTCACATaGACGATCCTTCTCACTCGT +
Preference number: 4 (lower is better)
Translates to: HWCELHPIRGEAAPGDAKPTGFT*TILLTR
Trigger: ACGAGTGAGAAGGATCGTCCATGTGAAACCTGTGGG...CTTGGCATCCCCAGGAGCAGCTTCTCCTCTGATAGGGTGCAGCTCACACCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAGGAGGACCAGCACCTTTCCCTTCAGGCGTTaGACGAAGCCTCTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: VDVDSPSKAGSSRRRTSTFPFRR*TKPLVH
Trigger: GTGGACCAGAGGCTTCGTCCAACGCCTGAAGGGAAA...GGTGCTGGTCCTCCTCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp CACTGGTGTGAGCTGCACCCTATCAGAGGAGAAGCTGCTCCTGGGGATGCCAAGAATGAAGTTTGCTCCTaGGTGAACCTCAGGGCCGTT +
Preference number: 4 (lower is better)
Translates to: HWCELHPIRGEAAPGDAKNEVCS*VNLRAV
Trigger: AACGGCCCTGAGGTTCACCCAGGAGCAAACTTCATT...CTTGGCATCCCCAGGAGCAGCTTCTCCTCTGATAGGGTGCAGCTCACACCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp CACAGACTCCAGACCCTGCAGCGCCCAACTGAGTACTCACTCACGCAAGGTGAGTCAGCAACTCATACTTaGCCTTCAGCAGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: HRLQTLQRPTEYSLTQGESATHT*PSAVLG
Trigger: GCCAAGGACTGCTGAAGGCCAAGTATGAGTTGCTGA...CTCACCTTGCGTGAGTGAGTACTCAGTTGGGCGCTGCAGGGTCTGGAGTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TGGCTCTTCCCAGGTTACATGAGAACTGGTGATCTCGGTGGGGTCTCAAGTAGATCCAAGAATGTGCCCTaGCCTGTGTGGGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: WLFPGYMRTGDLGGVSSRSKNVP*PVWGSG
Trigger: GCCTGAGCCCCACACAGGCCAGGGCACATTCTTGGA...TCTACTTGAGACCCCACCGAGATCACCAGTTCTCATGTAACCTGGGAAGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp CCCGTCCCAGGGAGCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGATTGCACGGATCCCAGTaGTCCTGGCTCGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: PVPGSTKLFIHQLETGQGLHGSQ*SWLGSG
Trigger: GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAA...TCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGCTCCCTGGGACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp CACAGACTCCAGACCCTGCAGCGCCCAACTGAGTACTCACTCACGCAAGGTGAGTTGACCCTGGCCAGATaGGCCATAATGCTCAATTTG +
Preference number: 4 (lower is better)
Translates to: HRLQTLQRPTEYSLTQGELTLAR*AIMLNL
Trigger: CAAATTGAGCATTATGGCTCATCTGGCCAGGGTCAA...CTCACCTTGCGTGAGTGAGTACTCAGTTGGGCGCTGCAGGGTCTGGAGTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp TACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGACACCGTGTGTGGCCATaGCTGCCCGCAGGTTATCAC +
Preference number: 4 (lower is better)
Translates to: YQAMLLMLIVLARLAVPGHRVWP*LPAGYH
Trigger: GTGATAACCTGCGGGCAGTCATGGCCACACACGGTG...TCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp TTCCATTTAAAGTGTGCGTCACCCGCAGAAGACAACAGGTGCCGGAGTTCACTCTCCCTGTCAGCCTTGTaGAGCAGCTTGAAGAGCCCG +
Preference number: 4 (lower is better)
Translates to: FHLKCASPAEDNRCRSSLSLSAL*SSLKSP
Trigger: CGGGCTCTTCAAGCTGCTTCACAAGGCTGACAGGGA...GAGTGAACTCCGGCACCTGTTGTCTTCTGCGGGTGACGCACACTTTAAATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TTCCATTTAAAGTGTGCGTCACCCGCAGAAGACAACAGGTGCCGGAGTTCACTCAGGGCACACTGCAGCTaGAGGAAATCCCAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: FHLKCASPAEDNRCRSSLRAHCS*RKSQSS
Trigger: GGAGGACTGGGATTTCCTGCAGCTGCAGTGTGCCCT...GAGTGAACTCCGGCACCTGTTGTCTTCTGCGGGTGACGCACACTTTAAATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp AGGGCAGATGATCAAAGTAGGGAGAATTTTAACACCAGTCATGGGACACAGTGGGCAGTGCAGCCAGGCTaGTGCTGCAGCTTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: RADDQSRENFNTSHGTQWAVQPG*CCSLPV
Trigger: CACGGGCAAGCTGCAGCAGCAGCCTGGCTGCACTGC...CCACTGTGTCCCATGACTGGTGTTAAAATTCTCCCTACTTTGATCATCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp GCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGAGTCAAGGTCAGGCGGGTCTCCTCAGCAGTaGAGCCAGGCTGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: AQNSLYISWRQDKESRSGGSPQQ*SQAAAA
Trigger: TGCAGCAGCAGCCTGGCTGCACTGCTGAGGAGACCC...GCCTGACCTTGACTCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp GGGCTTCGATGTACTCATCACATTTCTTGTAGCCGGCATTCAGCAACTCATACTCCCGGAGGCAGGCACTaGCAGCGTGGTCACGGATCA +
Preference number: 4 (lower is better)
Translates to: GLRCTHHISCSRHSATHTPGGRH*QRGHGS
Trigger: TGATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGG...AGTATGAGTTGCTGAATGCCGGCTACAAGAAATGTGATGAGTACATCGAAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR GCA 90 bp TGGCTCATCGTCAGGTGTGAAGACACCATGGGGAGCCGATGGATGTATGCAGTGACCTGGCTCCATCTGTaGCCTCATGTACTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: WLIVRCEDTMGSRWMYAVTWLHL*PHVLVP
Trigger: AGGGACAAGTACATGAGGGCACAGATGGAGCCAGGT...CACTGCATACATCCATCGGCTCCCCATGGTGTCTTCACACCTGACGATGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TGTTCCTCGGTGGTGGAACAGACTGCAAGGTACAAGAACAGGCTTCTTCTAGCCTGCCTGGCTCACCAATaGTCTGGGCACACAGAGCAC +
Preference number: 4 (lower is better)
Translates to: CSSVVEQTARYKNRLLLACLAHQ*SGHTEH
Trigger: GTGCTCTGTGTGCCCAGAGCATTGGTGAGCCAGGCA...GGCTAGAAGAAGCCTGTTCTTGTACCTTGCAGTCTGTTCCACCACCGAGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR GCA 90 bp TTCCATTTAAAGTGTGCGTCACCCGCAGAAGACAACAGGTGCCGGAGTTCACTCTGGACACCTCTGGAATaGCCTGCACCACCACCTTGG +
Preference number: 4 (lower is better)
Translates to: FHLKCASPAEDNRCRSSLWTPLE*PAPPPW
Trigger: CCAAGGTGGTGGTGCAGGGCATTCCAGAGGTGTCCA...GAGTGAACTCCGGCACCTGTTGTCTTCTGCGGGTGACGCACACTTTAAATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TTCCATTTAAAGTGTGCGTCACCCGCAGAAGACAACAGGTGCCGGAGTTCACTCCGTGCCTCCTGTCGATaGTCATGCCGTGGTTCACCA +
Preference number: 4 (lower is better)
Translates to: FHLKCASPAEDNRCRSSLRASCR*SCRGSP
Trigger: TGGTGAACCACGGCATGAGCATCGACAGGAGGCACG...GAGTGAACTCCGGCACCTGTTGTCTTCTGCGGGTGACGCACACTTTAAATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp CCAGTGTCAGGTGATTATACCATGCTCCCTGACTCGGAGCTTTACTGCAGGCCAGAGAGCAGCATCACGTaGCTCCTGTCGATGCTCATG +
Preference number: 4 (lower is better)
Translates to: PVSGDYTMLPDSELYCRPESSIT*LLSMLM
Trigger: CATGAGCATCGACAGGAGGCACGTGATGCTGCTCTC...TGGCCTGCAGTAAAGCTCCGAGTCAGGGAGCATGGTATAATCACCTGACACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR GCA 90 bp CCTATGATTCAATTCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGAAAATCCAAGAATGTaGCCTGGCCTGTGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PMIQFYPPLAFARIPVVLENPRM*PGLCGA
Trigger: AGCCCCACACAGGCCAGGGCACATTCTTGGATTTTC...CAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGAATTGAATCATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TGGCTCTTCCCAGGTTACATGAGAACTGGTGATCTCGGTGGGGTCTCAAGTAGAAATCTGAAGGTCCGGTaGGGCTTGACCCTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: WLFPGYMRTGDLGGVSSRNLKVR*GLTLAR
Trigger: TCTGGCCAGGGTCAAGCCCCACCGGACCTTCAGATT...TCTACTTGAGACCCCACCGAGATCACCAGTTCTCATGTAACCTGGGAAGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GCCCGTGTTCAGGGCTTCGATGTACTCATCACATTTCTTGTAGCCGGCATTCAGGCCTTCAGCAGTCCTTaGCCAGGTGTGACATCACCG +
Preference number: 4 (lower is better)
Translates to: ARVQGFDVLITFLVAGIQAFSSP*PGVTSP
Trigger: CGGTGATGTCACACCTGGCCAAGGACTGCTGAAGGC...CTGAATGCCGGCTACAAGAAATGTGATGAGTACATCGAAGCCCTGAACACGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR CCA 90 bp CACAGACTCCAGACCCTGCAGCGCCCAACTGAGTACTCACTCACGCAAGGTGAGGCTTCACACGGAGCTTaGATGTGCAGATGGAATATC +
Preference number: 4 (lower is better)
Translates to: HRLQTLQRPTEYSLTQGEASHGA*MCRWNI
Trigger: GATATTCCATCTGCACATCCAAGCTCCGTGTGAAGC...CTCACCTTGCGTGAGTGAGTACTCAGTTGGGCGCTGCAGGGTCTGGAGTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAGGAGGACCAGCACCAGTCATGGGACACAGTaGGGAGCACAAACAGTAGGG +
Preference number: 4 (lower is better)
Translates to: VDVDSPSKAGSSRRRTSTSHGTQ*GAQTVG
Trigger: CCCTACTGTTTGTGCTCCCCACTGTGTCCCATGACT...GGTGCTGGTCCTCCTCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp CCCGTCCCAGGGAGCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGACCTCTTGGGACAGCATaGTGTGGCAGCAGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: PVPGSTKLFIHQLETGQGPLGTA*CGSRFC
Trigger: GCAAAACCTGCTGCCACATCATGCTGTCCCAAGAGG...TCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGCTCCCTGGGACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp CCTATGATTCAATTCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGCCACATCTCCATCGATaGGGTGTCTCTCTACGATGT +
Preference number: 4 (lower is better)
Translates to: PMIQFYPPLAFARIPVVLPHLHR*GVSLRC
Trigger: ACATCGTAGAGAGACACCTCATCGATGGAGATGTGG...CAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGAATTGAATCATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp GGGCTTCGATGTACTCATCACATTTCTTGTAGCCGGCATTCAGCAACTCATACTCAGCCTGGCGAGCCGTaGCATGGCATCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GLRCTHHISCSRHSATHTQPGEP*HGICSF
Trigger: GAAGCTGCAGATGCCATGTCACGGCTCGCCAGGCTG...AGTATGAGTTGCTGAATGCCGGCTACAAGAAATGTGATGAGTACATCGAAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR TCA 90 bp TGGCTCTTCCCAGGTTACATGAGAACTGGTGATCTCGGTGGGGTCTCAAGTAGAGTCCTTGGCCAGGTGTaGCATCACCGATCCCAATTG +
Preference number: 4 (lower is better)
Translates to: WLFPGYMRTGDLGGVSSRVLGQV*HHRSQL
Trigger: CAATTGGGATCGGTGATGTCACACCTGGCCAAGGAC...TCTACTTGAGACCCCACCGAGATCACCAGTTCTCATGTAACCTGGGAAGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp CTTCCTGAGAAGGTGATGAGACTCGGGTCTGGATACACTGGGCTCTCTTCATGTCACCCTTGTAGGTCATaGGGTCGGAGAGCAGCATCA +
Preference number: 4 (lower is better)
Translates to: LPEKVMRLGSGYTGLSSCHPCRS*GRRAAS
Trigger: TGATGCTGCTCTCCGACCTCATGACCTACAAGGGTG...ACATGAAGAGAGCCCAGTGTATCCAGACCCGAGTCTCATCACCTTCTCAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR GCA 90 bp TGGCTCTTCCCAGGTTACATGAGAACTGGTGATCTCGGTGGGGTCTCAAGTAGAAGATTAGAGAAACGATaGCCCCAGCACCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: WLFPGYMRTGDLGGVSSRRLEKR*PQHLLG
Trigger: CCCCAGGAGGTGCTGGGGGCATCGTTTCTCTAATCT...TCTACTTGAGACCCCACCGAGATCACCAGTTCTCATGTAACCTGGGAAGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAACTTGGATGTGCGCCTaGTGGCGCATCTCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: YQAMLLMLIVLARLAVPGTWMCA*WRISSG
Trigger: ACCTGAGGAGATGCGCCAGCAGGCGCACATCCAAGT...TCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TTCCATTTAAAGTGTGCGTCACCCGCAGAAGACAACAGGTGCCGGAGTTCACTCTTGTGCAGCGAGGGCTaGCGATTGAACAGCACCACA +
Preference number: 4 (lower is better)
Translates to: FHLKCASPAEDNRCRSSLLCSEG*RLNSTT
Trigger: TGTGGTGCTGTTCAATCGGCAGCCCTCGCTGCACAA...GAGTGAACTCCGGCACCTGTTGTCTTCTGCGGGTGACGCACACTTTAAATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp ACAGTGGGGAGCACAAACAGTAGGGTTTACCAGGCAATGCTGTTGATGTTGATAGTGCAGCCAGGCTGCTaGTGCAGCTTGCCCGTGTTC +
Preference number: 4 (lower is better)
Translates to: TVGSTNSRVYQAMLLMLIVQPGC*CSLPVF
Trigger: GAACACGGGCAAGCTGCAGCAGCAGCCTGGCTGCAC...TATCAACATCAACAGCATTGCCTGGTAAACCCTACTGTTTGTGCTCCCCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TTCCATTTAAAGTGTGCGTCACCCGCAGAAGACAACAGGTGCCGGAGTTCACTCACACAGAGCACCCACTaGAGAACCTGGCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: FHLKCASPAEDNRCRSSLTQSTH*RTWLHL
Trigger: CAGATGGAGCCAGGTTCTGCAGTGGGTGCTCTGTGT...GAGTGAACTCCGGCACCTGTTGTCTTCTGCGGGTGACGCACACTTTAAATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TGTTCCTCGGTGGTGGAACAGACTGCAAGGTACAAGAACAGGCTTCTTCTAGCCGTGTGTGGCCATGACTaGCCGCAGGTTATCACCTTC +
Preference number: 4 (lower is better)
Translates to: CSSVVEQTARYKNRLLLAVCGHD*PQVITF
Trigger: GAAGGTGATAACCTGCGGGCAGTCATGGCCACACAC...GGCTAGAAGAAGCCTGTTCTTGTACCTTGCAGTCTGTTCCACCACCGAGGAACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR GCA 90 bp CCCGTCCCAGGGAGCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGAAGCTGCTCCTGGGGATaGCAAGAGGGCTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: PVPGSTKLFIHQLETGQGSCSWG*QEGFSD
Trigger: ATCAGAGAAGCCCTCTTGGCATCCCCAGGAGCAGCT...TCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGCTCCCTGGGACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp GTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAGGAGGACCAGCACCGAGGCTCCTTGGCGGTaGCATCTTTATTATTCCCAG +
Preference number: 4 (lower is better)
Translates to: VDVDSPSKAGSSRRRTSTEAPWR*HLYYSQ
Trigger: CTGGGAATAATAAAGATGGCACCGCCAAGGAGCCTC...GGTGCTGGTCCTCCTCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp CCTATGATTCAATTCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGTCATGCTTGAGGATGTaGTGCTACCTGGCCTTTGAG +
Preference number: 4 (lower is better)
Translates to: PMIQFYPPLAFARIPVVLSCLRM*CYLAFE
Trigger: CTCAAAGGCCAGGTAGCAGCACATCCTCAAGCATGA...CAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGAATTGAATCATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp CCAGTGTCAGGTGATTATACCATGCTCCCTGACTCGGAGCTTTACTGCAGGCCATCCCAAGTGCTGGGATaGTGGGATTATGGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: PVSGDYTMLPDSELYCRPSQVLG*WDYGCE
Trigger: CTCACACCCATAATCCCAGCATCCCAGCACTTGGGA...TGGCCTGCAGTAAAGCTCCGAGTCAGGGAGCATGGTATAATCACCTGACACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR GCA 90 bp GTTCCATACTCCTTGGCAGATTCCAGCTTCCATGACTACCATCCTGCTTCTCTTGACTCGGAGCTTTACTaGAGGCCACTCGGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: VPYSLADSSFHDYHPASLDSELY*RPLGSG
Trigger: GCCTGACCCGAGTGGCCTGCAGTAAAGCTCCGAGTC...AAGAGAAGCAGGATGGTAGTCATGGAAGCTGGAATCTGCCAAGGAGTATGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp GGCCAAAAATCACTCGGTCACGAATTCCTAATCCACAATCACATCAGTAGGAAGGCCGGGACGCCTCCTTaGCACTCGGGAGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: GQKSLGHEFLIHNHISRKAGTPP*HSGGQI
Trigger: AATCTGGCCTCCCGAGTGCCAAGGAGGCGTCCCGGC...CTTCCTACTGATGTGATTGTGGATTAGGAATTCGTGACCGAGTGATTTTTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAGGAGGACCAGCACCTGTGGCTTATTTTCTTaGCCACATCCGTCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: VDVDSPSKAGSSRRRTSTCGLFS*PHPSPG
Trigger: TCCGGGAGACGGATGTGGCCAAGAAAATAAGCCACA...GGTGCTGGTCCTCCTCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp CCTTGGCGGTGCCATCTTTATTATTCCCAGCCACAAGTTATAGCCACAACCTCTTGGATGTGCGCCTGCTaGCGCATCTCCTCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: PWRCHLYYSQPQVIATTSWMCAC*RISSGD
Trigger: GTCACCTGAGGAGATGCGCCAGCAGGCGCACATCCA...AGAGGTTGTGGCTATAACTTGTGGCTGGGAATAATAAAGATGGCACCGCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TTCCATTTAAAGTGTGCGTCACCCGCAGAAGACAACAGGTGCCGGAGTTCACTCAGCAAGGGGGCATGTTaGTTGTCCTGGCTGTACAGG +
Preference number: 4 (lower is better)
Translates to: FHLKCASPAEDNRCRSSLSKGAC*LSWLYR
Trigger: CCTGTACAGCCAGGACAACCAACATGCCCCCTTGCT...GAGTGAACTCCGGCACCTGTTGTCTTCTGCGGGTGACGCACACTTTAAATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGAGTCAAGGTCAGGCAGACAGGAGCCAGCCTaGCGAGCCGTGACATGGCAT +
Preference number: 4 (lower is better)
Translates to: AQNSLYISWRQDKESRSGRQEPA*RAVTWH
Trigger: ATGCCATGTCACGGCTCGCCAGGCTGGCTCCTGTCT...GCCTGACCTTGACTCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TTCCATTTAAAGTGTGCGTCACCCGCAGAAGACAACAGGTGCCGGAGTTCACTCGTCTTCAGGGTCATCTaGGTGCCTGGCTCACCAATG +
Preference number: 4 (lower is better)
Translates to: FHLKCASPAEDNRCRSSLVFRVI*VPGSPM
Trigger: CATTGGTGAGCCAGGCACCCAGATGACCCTGAAGAC...GAGTGAACTCCGGCACCTGTTGTCTTCTGCGGGTGACGCACACTTTAAATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp CCCGTCCCAGGGAGCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGACACAGTCAGGGTCACTaGTGTGAGCTGCACCCTATC +
Preference number: 4 (lower is better)
Translates to: PVPGSTKLFIHQLETGQGHSQGH*CELHPI
Trigger: GATAGGGTGCAGCTCACACCAGTGACCCTGACTGTG...TCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGCTCCCTGGGACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGATGTGGGGCTCAGGCCTaGCTCATCGTCAGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: YQAMLLMLIVLARLAVPGCGAQA*LIVRCE
Trigger: TTCACACCTGACGATGAGCCAGGCCTGAGCCCCACA...TCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAGGAGGACCAGCACCGGCTTCCATAGGCCATaGAGAATGGGTTTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: VDVDSPSKAGSSRRRTSTGFHRP*RMGLAL
Trigger: AAGAGCCAAACCCATTCTCCATGGCCTATGGAAGCC...GGTGCTGGTCCTCCTCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp CCTTGGCGGTGCCATCTTTATTATTCCCAGCCACAAGTTATAGCCACAACCTCTGCGAGGGCTGCCGATTaGACAGCACCACATCTCCAT +
Preference number: 4 (lower is better)
Translates to: PWRCHLYYSQPQVIATTSARAAD*TAPHLH
Trigger: ATGGAGATGTGGTGCTGTTCAATCGGCAGCCCTCGC...AGAGGTTGTGGCTATAACTTGTGGCTGGGAATAATAAAGATGGCACCGCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp GGCCAAAAATCACTCGGTCACGAATTCCTAATCCACAATCACATCAGTAGGAAGCAGCCTGGCGAGCCGTaGCATGGCATCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GQKSLGHEFLIHNHISRKQPGEP*HGICSF
Trigger: GAAGCTGCAGATGCCATGTCACGGCTCGCCAGGCTG...CTTCCTACTGATGTGATTGTGGATTAGGAATTCGTGACCGAGTGATTTTTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp GTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAGGAGGACCAGCACCATCACCGATCCCAATTaGGAAACCACGGTTAGACAG +
Preference number: 4 (lower is better)
Translates to: VDVDSPSKAGSSRRRTSTITDPN*ETTVRQ
Trigger: CTGTCTAACCGTGGTTTCTCAATTGGGATCGGTGAT...GGTGCTGGTCCTCCTCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp GGCCAAAAATCACTCGGTCACGAATTCCTAATCCACAATCACATCAGTAGGAAGGCACTCGAGAGCCACTaGTGGCCTGCTGTCCCACAC +
Preference number: 4 (lower is better)
Translates to: GQKSLGHEFLIHNHISRKALESH*WPAVPH
Trigger: GTGTGGGACAGCAGGCCATCAGTGGCTCTCGAGTGC...CTTCCTACTGATGTGATTGTGGATTAGGAATTCGTGACCGAGTGATTTTTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp ATCCAAGAACCAATGGCTACCCCGGGTACCTTAACAGCATCAACTCAGAACTTACTACTTGGGTGGGGGTaGTGCGGTCCAGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: IQEPMATPGTLTASTQNLLLGWG*CGPAGT
Trigger: TGTACCAGCTGGACCGCATCACCCCCACCCAAGTAG...TAAGTTCTGAGTTGATGCTGTTAAGGTACCCGGGGTAGCCATTGGTTCTTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp CCAGTGTCAGGTGATTATACCATGCTCCCTGACTCGGAGCTTTACTGCAGGCCACATGGAGGCCACACCTaGAAAGTGGAAAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: PVSGDYTMLPDSELYCRPHGGHT*KVESLQ
Trigger: CTGAAGACTTTCCACTTTGCAGGTGTGGCCTCCATG...TGGCCTGCAGTAAAGCTCCGAGTCAGGGAGCATGGTATAATCACCTGACACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR GCA 90 bp GTTCCATACTCCTTGGCAGATTCCAGCTTCCATGACTACCATCCTGCTTCTCTTCGTGCCTCCTGTCGATaGTCATGCCGTGGTTCACCA +
Preference number: 4 (lower is better)
Translates to: VPYSLADSSFHDYHPASLRASCR*SCRGSP
Trigger: TGGTGAACCACGGCATGAGCATCGACAGGAGGCACG...AAGAGAAGCAGGATGGTAGTCATGGAAGCTGGAATCTGCCAAGGAGTATGGAAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR GCA 90 bp CCCGTCCCAGGGAGCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGATATCAGAGGAGAAGCTaGTCCTGGGGATGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: PVPGSTKLFIHQLETGQGYQRRS*SWGCQE
Trigger: CTCTTGGCATCCCCAGGAGCAGCTTCTCCTCTGATA...TCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGCTCCCTGGGACGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TGGCTCATCGTCAGGTGTGAAGACACCATGGGGAGCCGATGGATGTATGCAGTGAAGATGTTACAGAGCTaGCTGGGCCTCATGACAGTT +
Preference number: 4 (lower is better)
Translates to: WLIVRCEDTMGSRWMYAVKMLQS*LGLMTV
Trigger: AACTGTCATGAGGCCCAGGCAGCTCTGTAACATCTT...CACTGCATACATCCATCGGCTCCCCATGGTGTCTTCACACCTGACGATGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGACCATCTCATCCCCATTaGAGCAGGCCCCAAACTCCA +
Preference number: 4 (lower is better)
Translates to: YQAMLLMLIVLARLAVPGPSHPH*SRPQTP
Trigger: TGGAGTTTGGGGCCTGCTGCAATGGGGATGAGATGG...TCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TGGCTCTTCCCAGGTTACATGAGAACTGGTGATCTCGGTGGGGTCTCAAGTAGATTCTTACTCACAACTTaGATGTGCGCCTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: WLFPGYMRTGDLGGVSSRFLLTT*MCACWR
Trigger: GCGCCAGCAGGCGCACATCCAAGTTGTGAGTAAGAA...TCTACTTGAGACCCCACCGAGATCACCAGTTCTCATGTAACCTGGGAAGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TGTTCAGGGCTTCGATGTACTCATCACATTTCTTGTAGCCGGCATTCAGCAACTAGACAGGAGCCAGCCTaGCGAGCCGTGACATGGCAT +
Preference number: 4 (lower is better)
Translates to: CSGLRCTHHISCSRHSATRQEPA*RAVTWH
Trigger: ATGCCATGTCACGGCTCGCCAGGCTGGCTCCTGTCT...AGTTGCTGAATGCCGGCTACAAGAAATGTGATGAGTACATCGAAGCCCTGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR CCA 90 bp TGGCTCTTCCCAGGTTACATGAGAACTGGTGATCTCGGTGGGGTCTCAAGTAGACCTCATAGGTGTTATTaGAGGTGGTTCGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: WLFPGYMRTGDLGGVSSRPHRCY*RWFGCP
Trigger: AGGGCACCCGAACCACCTCCAATAACACCTATGAGG...TCTACTTGAGACCCCACCGAGATCACCAGTTCTCATGTAACCTGGGAAGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TGTTCCTCGGTGGTGGAACAGACTGCAAGGTACAAGAACAGGCTTCTTCTAGCCCCTCATAGGTGTTATTaGAGGTGGTTCGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: CSSVVEQTARYKNRLLLAPHRCY*RWFGCP
Trigger: AGGGCACCCGAACCACCTCCAATAACACCTATGAGG...GGCTAGAAGAAGCCTGTTCTTGTACCTTGCAGTCTGTTCCACCACCGAGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp TTCCATTTAAAGTGTGCGTCACCCGCAGAAGACAACAGGTGCCGGAGTTCACTCTCGATGCTCATGCCGTaGTTCACCATGGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: FHLKCASPAEDNRCRSSLSMLMP*FTMVYW
Trigger: CCAGTACACCATGGTGAACCACGGCATGAGCATCGA...GAGTGAACTCCGGCACCTGTTGTCTTCTGCGGGTGACGCACACTTTAAATGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GGCCAAAAATCACTCGGTCACGAATTCCTAATCCACAATCACATCAGTAGGAAGCTCTCCCGAGCAGCGTaGCACAGTCAGGGTCACTGG +
Preference number: 4 (lower is better)
Translates to: GQKSLGHEFLIHNHISRKLSRAA*HSQGHW
Trigger: CCAGTGACCCTGACTGTGCCACGCTGCTCGGGAGAG...CTTCCTACTGATGTGATTGTGGATTAGGAATTCGTGACCGAGTGATTTTTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAGGAGGACCAGCACCCAAGGTGAGGCTCCTTaGCGGTGCCATCTTTATTAT +
Preference number: 4 (lower is better)
Translates to: VDVDSPSKAGSSRRRTSTQGEAP*RCHLYY
Trigger: ATAATAAAGATGGCACCGCCAAGGAGCCTCACCTTG...GGTGCTGGTCCTCCTCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GTTCCATACTCCTTGGCAGATTCCAGCTTCCATGACTACCATCCTGCTTCTCTTCGGCCTCCCAAGTGCTaGGATGCTGGGATTATGGGT +
Preference number: 4 (lower is better)
Translates to: VPYSLADSSFHDYHPASLRPPKC*DAGIMG
Trigger: ACCCATAATCCCAGCATCCCAGCACTTGGGAGGCCG...AAGAGAAGCAGGATGGTAGTCATGGAAGCTGGAATCTGCCAAGGAGTATGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp CTTCCTGAGAAGGTGATGAGACTCGGGTCTGGATACACTGGGCTCTCTTCATGTCCTGTTCCTCGGTGGTaGAACAGACTGCAAGGTACA +
Preference number: 4 (lower is better)
Translates to: LPEKVMRLGSGYTGLSSCPVPRW*NRLQGT
Trigger: TGTACCTTGCAGTCTGTTCCACCACCGAGGAACAGG...ACATGAAGAGAGCCCAGTGTATCCAGACCCGAGTCTCATCACCTTCTCAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR TCA 90 bp TACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGATGGGGTCGGGCGAGATaGCTGTTCTGCCAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: YQAMLLMLIVLARLAVPGWGRAR*LFCQKN
Trigger: ATTTTTCTGGCAGAACAGTCATCTCGCCCGACCCCA...TCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp GGGCTTCGATGTACTCATCACATTTCTTGTAGCCGGCATTCAGCAACTCATACTGCGAGGGCTGCCGATTaGACAGCACCACATCTCCAT +
Preference number: 4 (lower is better)
Translates to: GLRCTHHISCSRHSATHTARAAD*TAPHLH
Trigger: ATGGAGATGTGGTGCTGTTCAATCGGCAGCCCTCGC...AGTATGAGTTGCTGAATGCCGGCTACAAGAAATGTGATGAGTACATCGAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR TCA 90 bp TTACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGGATGGATGTATGCAGTaGGCTGGGATGGACCATGAC +
Preference number: 4 (lower is better)
Translates to: LPGNAVDVDSPSKAGSSRDGCMQ*AGMDHD
Trigger: GTCATGGTCCATCCCAGCTCACTGCATACATCCATC...CCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp CCCGTCCCAGGGAGCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGATTACATGAGAACTGGTaGTCTCGGTGGGGTCTCAAG +
Preference number: 4 (lower is better)
Translates to: PVPGSTKLFIHQLETGQGLHENW*SRWGLK
Trigger: CTTGAGACCCCACCGAGATCACCAGTTCTCATGTAA...TCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGCTCCCTGGGACGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp CTTCCTGAGAAGGTGATGAGACTCGGGTCTGGATACACTGGGCTCTCTTCATGTTTATACCATGCTCCCTaGCTCGGAGCTTTACTGCAG +
Preference number: 4 (lower is better)
Translates to: LPEKVMRLGSGYTGLSSCLYHAP*LGALLQ
Trigger: CTGCAGTAAAGCTCCGAGTCAGGGAGCATGGTATAA...ACATGAAGAGAGCCCAGTGTATCCAGACCCGAGTCTCATCACCTTCTCAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR GCA 90 bp CCTTGGCGGTGCCATCTTTATTATTCCCAGCCACAAGTTATAGCCACAACCTCTTCCGTCTCCCGGAACTaGTCCTTCACCATGATGACC +
Preference number: 4 (lower is better)
Translates to: PWRCHLYYSQPQVIATTSSVSRN*SFTMMT
Trigger: GGTCATCATGGTGAAGGAGCAGTTCCGGGAGACGGA...AGAGGTTGTGGCTATAACTTGTGGCTGGGAATAATAAAGATGGCACCGCCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp CCTTGGCGGTGCCATCTTTATTATTCCCAGCCACAAGTTATAGCCACAACCTCTGGTCCACTTCTTGGGTaGCATGTTGAGGGGAATGCC +
Preference number: 4 (lower is better)
Translates to: PWRCHLYYSQPQVIATTSGPLLG*HVEGNA
Trigger: GGCATTCCCCTCAACATGGCACCCAAGAAGTGGACC...AGAGGTTGTGGCTATAACTTGTGGCTGGGAATAATAAAGATGGCACCGCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp CAGCAACTCATACTTGGCCTTCAGCAGTCCTTGGCCAGGTGTGACATCACCGATATAATGCTCAATTTGTaGAGCGAGGGCTGCCGATTG +
Preference number: 4 (lower is better)
Translates to: QQLILGLQQSLARCDITDIMLNL*SEGCRL
Trigger: CAATCGGCAGCCCTCGCTGCACAAATTGAGCATTAT...ATCGGTGATGTCACACCTGGCCAAGGACTGCTGAAGGCCAAGTATGAGTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR GCA 90 bp TGGCTCTTCCCAGGTTACATGAGAACTGGTGATCTCGGTGGGGTCTCAAGTAGAAGAGATCTTCCCCTTTaGCACAGTACTGCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: WLFPGYMRTGDLGGVSSRRDLPL*HSTACP
Trigger: AGGGCAAGCAGTACTGTGGCAAAGGGGAAGATCTCT...TCTACTTGAGACCCCACCGAGATCACCAGTTCTCATGTAACCTGGGAAGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp CCTATGATTCAATTCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGTTCCTTTGTCCATGCTaGCACTCATCAACTCACTGT +
Preference number: 4 (lower is better)
Translates to: PMIQFYPPLAFARIPVVLFLCPC*HSSTHC
Trigger: ACAGTGAGTTGATGAGTGGCAGCATGGACAAAGGAA...CAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGAATTGAATCATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp ACAGTGGGGAGCACAAACAGTAGGGTTTACCAGGCAATGCTGTTGATGTTGATAACCTCTGGAATGCCCTaGACCACCACCTTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: TVGSTNSRVYQAMLLMLITSGMP*TTTLGR
Trigger: TCTCCCCAAGGTGGTGGTGCAGGGCATTCCAGAGGT...TATCAACATCAACAGCATTGCCTGGTAAACCCTACTGTTTGTGCTCCCCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp GATTGTGATTTACCTGTAACACCAGTGTCAGGTGATTATACCATGCTCCCTGACTCCGGGCGGCCTCGATaGCCAGAGTTTTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: DCDLPVTPVSGDYTMLPDSGRPR*PEFSPP
Trigger: AGGTGGAGAAAACTCTGGGCATCGAGGCCGCCCGGA...GTCAGGGAGCATGGTATAATCACCTGACACTGGTGTTACAGGTAAATCACAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR GCA 90 bp TGTGATTTACCTGTAACACCAGTGTCAGGTGATTATACCATGCTCCCTGACTCGCCTCGGCCTCCCAAGTaGTGGGATGCTGGGATTATG +
Preference number: 4 (lower is better)
Translates to: CDLPVTPVSGDYTMLPDSPRPPK*WDAGIM
Trigger: CATAATCCCAGCATCCCAGCACTTGGGAGGCCGAGG...CGAGTCAGGGAGCATGGTATAATCACCTGACACTGGTGTTACAGGTAAATCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp GCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGAGTCAAGGTCAGGCCAGGTTGGCCCTCACTaGATTGTCATCGCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: AQNSLYISWRQDKESRSGQVGPH*IVIARP
Trigger: AGGCCTAGCGATGACAATCCAGTGAGGGCCAACCTG...GCCTGACCTTGACTCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGATGGCGAGCCGTGACATaGCATCTGCAGCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: YQAMLLMLIVLARLAVPGWRAVT*HLQLHS
Trigger: AGAATGAAGCTGCAGATGCCATGTCACGGCTCGCCA...TCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TGGCTCTTCCCAGGTTACATGAGAACTGGTGATCTCGGTGGGGTCTCAAGTAGAGTTTTCAAAGCCGTCTaGCACTCGAGAGCCACTGAT +
Preference number: 4 (lower is better)
Translates to: WLFPGYMRTGDLGGVSSRVFKAV*HSRATD
Trigger: ATCAGTGGCTCTCGAGTGCCAGACGGCTTTGAAAAC...TCTACTTGAGACCCCACCGAGATCACCAGTTCTCATGTAACCTGGGAAGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TGTGATTTACCTGTAACACCAGTGTCAGGTGATTATACCATGCTCCCTGACTCGGGCTCACCAATGCTCTaGGCACACAGAGCACCCACT +
Preference number: 4 (lower is better)
Translates to: CDLPVTPVSGDYTMLPDSGSPML*AHRAPT
Trigger: AGTGGGTGCTCTGTGTGCCCAGAGCATTGGTGAGCC...CGAGTCAGGGAGCATGGTATAATCACCTGACACTGGTGTTACAGGTAAATCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp TGGCTCTTCCCAGGTTACATGAGAACTGGTGATCTCGGTGGGGTCTCAAGTAGAGCCACACCTGCAAAGTaGAAAGTCTTCAGGGTCATC +
Preference number: 4 (lower is better)
Translates to: WLFPGYMRTGDLGGVSSRATPAK*KVFRVI
Trigger: GATGACCCTGAAGACTTTCCACTTTGCAGGTGTGGC...TCTACTTGAGACCCCACCGAGATCACCAGTTCTCATGTAACCTGGGAAGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TTACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAGGTGTTATTGGAGGTaGTTCGGGTGCCCTTCACAC +
Preference number: 4 (lower is better)
Translates to: LPGNAVDVDSPSKAGSSRRCYWR*FGCPSH
Trigger: GTGTGAAGGGCACCCGAACCACCTCCAATAACACCT...CCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GGCCAAAAATCACTCGGTCACGAATTCCTAATCCACAATCACATCAGTAGGAAGAGATCAGGGGCCTCTTaGGAGGGTTCGGGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GQKSLGHEFLIHNHISRKRSGAS*EGSGPC
Trigger: ACAGGGACCCGAACCCTCCCAAGAGGCCCCTGATCT...CTTCCTACTGATGTGATTGTGGATTAGGAATTCGTGACCGAGTGATTTTTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGAGTCAAGGTCAGGCGGATGTGCTGCTACCTaGCCTTTGAGCTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: AQNSLYISWRQDKESRSGGCAAT*PLSSVL
Trigger: CAGCACAGAGCTCAAAGGCCAGGTAGCAGCACATCC...GCCTGACCTTGACTCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp CCCGTCCCAGGGAGCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGAGCACCAAAAGTCGTGTaGGAATCAAATCAGACGGCT +
Preference number: 4 (lower is better)
Translates to: PVPGSTKLFIHQLETGQGAPKVV*ESNQTA
Trigger: AGCCGTCTGATTTGATTCTCACACGACTTTTGGTGC...TCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGCTCCCTGGGACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp GCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGAGTCAAGGTCAGGCTCACAACGGAGGGTCTaGTACACAAAGGAGGCACCA +
Preference number: 4 (lower is better)
Translates to: AQNSLYISWRQDKESRSGSQRRV*YTKEAP
Trigger: TGGTGCCTCCTTTGTGTATCAGACCCTCCGTTGTGA...GCCTGACCTTGACTCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp GCATTCAGCAACTCATACTTGGCCTTCAGCAGTCCTTGGCCAGGTGTGACATCATTGACCCTGGCCAGATaGGCCATAATGCTCAATTTG +
Preference number: 4 (lower is better)
Translates to: AFSNSYLAFSSPWPGVTSLTLAR*AIMLNL
Trigger: CAAATTGAGCATTATGGCTCATCTGGCCAGGGTCAA...TGATGTCACACCTGGCCAAGGACTGCTGAAGGCCAAGTATGAGTTGCTGAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR TCA 90 bp TTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTGAGCTCTCATAGGTCCGGTGGGGCTTaGCCCTGGCCAGATGAGCCA +
Preference number: 4 (lower is better)
Translates to: FISSKQVQRLKCNPLSSHRSGGA*PWPDEP
Trigger: TGGCTCATCTGGCCAGGGTCAAGCCCCACCGGACCT...ATGAGAGCTCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp TACTTGGCCTTCAGCAGTCCTTGGCCAGGTGTGACATCACCGATCCCAATTGAGCTTGCCAACCAGTATTaGAGCAATGATTTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: YLAFSSPWPGVTSPIPIELANQY*SNDLAS
Trigger: GCTTGCCAAATCATTGCTTCAATACTGGTTGGCAAG...CTCAATTGGGATCGGTGATGTCACACCTGGCCAAGGACTGCTGAAGGCCAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR TCA 90 bp CCCGTCCCAGGGAGCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGAGGCAGCTGGGAGCTTTaGGTGTTTTTCAAAATGAGG +
Preference number: 4 (lower is better)
Translates to: PVPGSTKLFIHQLETGQGGSWEL*VFFKMR
Trigger: CCTCATTTTGAAAAACACTCAAAGCTCCCAGCTGCC...TCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGCTCCCTGGGACGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp GGCCAAAAATCACTCGGTCACGAATTCCTAATCCACAATCACATCAGTAGGAAGTGTTCTCTCTGGGGGTaGCACACACCACAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: GQKSLGHEFLIHNHISRKCSLWG*HTPQPH
Trigger: GTGAGGCTGTGGTGTGTGTCACCCCCAGAGAGAACA...CTTCCTACTGATGTGATTGTGGATTAGGAATTCGTGACCGAGTGATTTTTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp CCTTGGCGGTGCCATCTTTATTATTCCCAGCCACAAGTTATAGCCACAACCTCTCTGCTACCTGGCCTTTaGGCTCTGTGCTGGCATAAA +
Preference number: 4 (lower is better)
Translates to: PWRCHLYYSQPQVIATTSLLPGL*ALCWHK
Trigger: TTTATGCCAGCACAGAGCTCAAAGGCCAGGTAGCAG...AGAGGTTGTGGCTATAACTTGTGGCTGGGAATAATAAAGATGGCACCGCCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp CCTATGATTCAATTCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGTCAAATGTAACCCTTTaGGCTCTCATGCTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: PMIQFYPPLAFARIPVVLSNVTL*ALMLED
Trigger: ATCCTCAAGCATGAGAGCTCAAAGGGTTACATTTGA...CAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGAATTGAATCATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAGGGACACGGGAAGACTaGTTTGATGTTGTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: YQAMLLMLIVLARLAVPGGTRED*FDVVQN
Trigger: GTTCTGGACAACATCAAAGCAGTCTTCCCGTGTCCC...TCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TGTTCCTCGGTGGTGGAACAGACTGCAAGGTACAAGAACAGGCTTCTTCTAGCCCACGGAGCTTGGATGTaGAGATGGAATATCTCACTG +
Preference number: 4 (lower is better)
Translates to: CSSVVEQTARYKNRLLLAHGAWM*RWNISL
Trigger: CAGTGAGATATTCCATCTGCACATCCAAGCTCCGTG...GGCTAGAAGAAGCCTGTTCTTGTACCTTGCAGTCTGTTCCACCACCGAGGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR GCA 90 bp CCAGTGTCAGGTGATTATACCATGCTCCCTGACTCGGAGCTTTACTGCAGGCCATTCTCCTTTCCACTCTaGTCGTCAATGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: PVSGDYTMLPDSELYCRPFSFPL*SSMWMT
Trigger: TGTCATCCACATTGACGAGCAGAGTGGAAAGGAGAA...TGGCCTGCAGTAAAGCTCCGAGTCAGGGAGCATGGTATAATCACCTGACACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR GCA 90 bp ACAGTGGGGAGCACAAACAGTAGGGTTTACCAGGCAATGCTGTTGATGTTGATAGAGAGCAGCATCACGTaGCTCCTGTCGATGCTCATG +
Preference number: 4 (lower is better)
Translates to: TVGSTNSRVYQAMLLMLIESSIT*LLSMLM
Trigger: CATGAGCATCGACAGGAGGCACGTGATGCTGCTCTC...TATCAACATCAACAGCATTGCCTGGTAAACCCTACTGTTTGTGCTCCCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp AGGGCAGATGATCAAAGTAGGGAGAATTTTAACACCAGTCATGGGACACAGTGGGAGCCGATGGATGTATaGAGTGAGCTGGGATGGACC +
Preference number: 4 (lower is better)
Translates to: RADDQSRENFNTSHGTQWEPMDV*SELGWT
Trigger: GGTCCATCCCAGCTCACTGCATACATCCATCGGCTC...CCACTGTGTCCCATGACTGGTGTTAAAATTCTCCCTACTTTGATCATCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TGGCTCTTCCCAGGTTACATGAGAACTGGTGATCTCGGTGGGGTCTCAAGTAGATGCCTTGTTCTCAAGTaGTATACGCTGATTCGCACC +
Preference number: 4 (lower is better)
Translates to: WLFPGYMRTGDLGGVSSRCLVLK*YTLIRT
Trigger: GGTGCGAATCAGCGTATAGCACTTGAGAACAAGGCA...TCTACTTGAGACCCCACCGAGATCACCAGTTCTCATGTAACCTGGGAAGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp CCAGTGTCAGGTGATTATACCATGCTCCCTGACTCGGAGCTTTACTGCAGGCCAAGGCACATGCCACCATaGCTGGCTAATTTTTGTATC +
Preference number: 4 (lower is better)
Translates to: PVSGDYTMLPDSELYCRPRHMPP*LANFCI
Trigger: GATACAAAAATTAGCCAGGCATGGTGGCATGTGCCT...TGGCCTGCAGTAAAGCTCCGAGTCAGGGAGCATGGTATAATCACCTGACACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp TTACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGTGCTTCTTCTCCTCTTaGGACAGCATGATGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LPGNAVDVDSPSKAGSSRCFFSS*DSMMWQ
Trigger: CTGCCACATCATGCTGTCCCAAGAGGAGAAGAAGCA...CCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGATCCTCCATGATCATCTaGGTCTTGGCTCCTGAGATC +
Preference number: 4 (lower is better)
Translates to: YQAMLLMLIVLARLAVPGSSMII*VLAPEI
Trigger: GATCTCAGGAGCCAAGACCCAGATGATCATGGAGGA...TCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp ATCCAAGAACCAATGGCTACCCCGGGTACCTTAACAGCATCAACTCAGAACTTAAGTACTGCTTGCCCTTaGTTCGCAGGTTGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: IQEPMATPGTLTASTQNLSTACP*FAGWPS
Trigger: TGAGGGCCAACCTGCGAACCAAGGGCAAGCAGTACT...TAAGTTCTGAGTTGATGCTGTTAAGGTACCCGGGGTAGCCATTGGTTCTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp ACAGTGGGGAGCACAAACAGTAGGGTTTACCAGGCAATGCTGTTGATGTTGATAACCCACTGCAGAACCTaGCTCCATCTGTGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: TVGSTNSRVYQAMLLMLITHCRT*LHLCPH
Trigger: ATGAGGGCACAGATGGAGCCAGGTTCTGCAGTGGGT...TATCAACATCAACAGCATTGCCTGGTAAACCCTACTGTTTGTGCTCCCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TGTTCCTCGGTGGTGGAACAGACTGCAAGGTACAAGAACAGGCTTCTTCTAGCCCTGTGCTGTGATAATTaGAGTGCTGATGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: CSSVVEQTARYKNRLLLALCCDN*SADGLG
Trigger: TCCAAGGCCATCAGCACTCCAATTATCACAGCACAG...GGCTAGAAGAAGCCTGTTCTTGTACCTTGCAGTCTGTTCCACCACCGAGGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp TTACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGGCAGCGTCAAAGAGATaGTCAGCCGTCTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LPGNAVDVDSPSKAGSSRAASKR*SAVFSK
Trigger: CTTTGAGAAGACGGCTGACCATCTCTTTGACGCTGC...CCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp ATCCAAGAACCAATGGCTACCCCGGGTACCTTAACAGCATCAACTCAGAACTTAACCATGGGGAGCCGATaGATGTATGCAGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: IQEPMATPGTLTASTQNLTMGSR*MYAVSW
Trigger: CCAGCTCACTGCATACATCCATCGGCTCCCCATGGT...TAAGTTCTGAGTTGATGCTGTTAAGGTACCCGGGGTAGCCATTGGTTCTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TGGCTCATCGTCAGGTGTGAAGACACCATGGGGAGCCGATGGATGTATGCAGTGAGCATGACCAAGGAATaGAAAATCCAAGAATGTGCC +
Preference number: 4 (lower is better)
Translates to: WLIVRCEDTMGSRWMYAVSMTKE*KIQECA
Trigger: GGCACATTCTTGGATTTTCCATTCCTTGGTCATGCT...CACTGCATACATCCATCGGCTCCCCATGGTGTCTTCACACCTGACGATGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp CCCGTCCCAGGGAGCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGAATAGGCCATGGAGAATaGGTTTGGCTCTTGTCACAG +
Preference number: 4 (lower is better)
Translates to: PVPGSTKLFIHQLETGQGIGHGE*VWLLSQ
Trigger: CTGTGACAAGAGCCAAACCCATTCTCCATGGCCTAT...TCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGCTCCCTGGGACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp ACAGTGGGGAGCACAAACAGTAGGGTTTACCAGGCAATGCTGTTGATGTTGATAAATTCTACCCTCCCCTaGCCTTTGCACGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: TVGSTNSRVYQAMLLMLINSTLP*PLHGSQ
Trigger: CTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGAATT...TATCAACATCAACAGCATTGCCTGGTAAACCCTACTGTTTGTGCTCCCCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp TTACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGCTGGGTCTTGGCTCCTaGGATCCGATGCTTTTTAAT +
Preference number: 4 (lower is better)
Translates to: LPGNAVDVDSPSKAGSSRLGLGS*DPMLFN
Trigger: ATTAAAAAGCATCGGATCTCAGGAGCCAAGACCCAG...CCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp TGGCTCTTCCCAGGTTACATGAGAACTGGTGATCTCGGTGGGGTCTCAAGTAGATATGTCTCTGCTGAATaGAGTTTGCTCCTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: WLFPGYMRTGDLGGVSSRYVSAE*SLLLGE
Trigger: TTCACCCAGGAGCAAACTTCATTCAGCAGAGACATA...TCTACTTGAGACCCCACCGAGATCACCAGTTCTCATGTAACCTGGGAAGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp GCTTGCCCGTGTTCAGGGCTTCGATGTACTCATCACATTTCTTGTAGCCGGCATTATGTCTCTGCTGAATaGAGTTTGCTCCTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: ACPCSGLRCTHHISCSRHYVSAE*SLLLGE
Trigger: TTCACCCAGGAGCAAACTTCATTCAGCAGAGACATA...ATGCCGGCTACAAGAAATGTGATGAGTACATCGAAGCCCTGAACACGGGCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR TCA 90 bp CCTTGGCGGTGCCATCTTTATTATTCCCAGCCACAAGTTATAGCCACAACCTCTTGCGTATGTCTCTGCTaGATGAAGTTTGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PWRCHLYYSQPQVIATTSCVCLC*MKFAPG
Trigger: CCCAGGAGCAAACTTCATTCAGCAGAGACATACGCA...AGAGGTTGTGGCTATAACTTGTGGCTGGGAATAATAAAGATGGCACCGCCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp CCCGTCCCAGGGAGCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGACCTGTTAGAAAATCCTaGATAGCAGCAATCAGCGGT +
Preference number: 4 (lower is better)
Translates to: PVPGSTKLFIHQLETGQGPVRKS*IAAISG
Trigger: ACCGCTGATTGCTGCTATTCAGGATTTTCTAACAGG...TCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGCTCCCTGGGACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp TACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGACCAGTATTGAAGCAATaGTTTGGCAAGCCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: YQAMLLMLIVLARLAVPGPVLKQ*FGKPWL
Trigger: GAGCCAAGGCTTGCCAAATCATTGCTTCAATACTGG...TCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp TTACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGACGGGAAGACTGCTTTaGTGTTGTCCAGAACCCTTT +
Preference number: 4 (lower is better)
Translates to: LPGNAVDVDSPSKAGSSRTGRLL*CCPEPF
Trigger: AAAGGGTTCTGGACAACATCAAAGCAGTCTTCCCGT...CCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp GGCCAAAAATCACTCGGTCACGAATTCCTAATCCACAATCACATCAGTAGGAAGTCAGCTCGTTTTTGCTaGGAGCAGGCTCACTGGGAC +
Preference number: 4 (lower is better)
Translates to: GQKSLGHEFLIHNHISRKSARFC*EQAHWD
Trigger: GTCCCAGTGAGCCTGCTCTCAGCAAAAACGAGCTGA...CTTCCTACTGATGTGATTGTGGATTAGGAATTCGTGACCGAGTGATTTTTGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp GCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGAGTCAAGGTCAGGCCGGAGTTCACTCCTATaGTTCAATTCTACCCTCCCC +
Preference number: 4 (lower is better)
Translates to: AQNSLYISWRQDKESRSGRSSLL*FNSTLP
Trigger: GGGGAGGGTAGAATTGAATCATAGGAGTGAACTCCG...GCCTGACCTTGACTCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp TACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGATCAAGTGCTATACGCTaGTTCGCACCCATCACAATC +
Preference number: 4 (lower is better)
Translates to: YQAMLLMLIVLARLAVPGSSAIR*FAPITI
Trigger: GATTGTGATGGGTGCGAATCAGCGTATAGCACTTGA...TCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp GTTCCATACTCCTTGGCAGATTCCAGCTTCCATGACTACCATCCTGCTTCTCTTACCCAAAAAGCTTCCTaGGAAGGTGATGAGACTCGG +
Preference number: 4 (lower is better)
Translates to: VPYSLADSSFHDYHPASLTQKAS*EGDETR
Trigger: CCGAGTCTCATCACCTTCTCAGGAAGCTTTTTGGGT...AAGAGAAGCAGGATGGTAGTCATGGAAGCTGGAATCTGCCAAGGAGTATGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR GCA 90 bp CCTTGGCGGTGCCATCTTTATTATTCCCAGCCACAAGTTATAGCCACAACCTCTGGGTTCCTTTGTCCATaGTGCCACTCATCAACTCAC +
Preference number: 4 (lower is better)
Translates to: PWRCHLYYSQPQVIATTSGFLCP*CHSSTH
Trigger: GTGAGTTGATGAGTGGCAGCATGGACAAAGGAACCC...AGAGGTTGTGGCTATAACTTGTGGCTGGGAATAATAAAGATGGCACCGCCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp CCTTGGCGGTGCCATCTTTATTATTCCCAGCCACAAGTTATAGCCACAACCTCTCCCTTTGAGCTCTCATaGTTGAGGATGTGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: PWRCHLYYSQPQVIATTSPFELS*LRMCCY
Trigger: GTAGCAGCACATCCTCAAGCATGAGAGCTCAAAGGG...AGAGGTTGTGGCTATAACTTGTGGCTGGGAATAATAAAGATGGCACCGCCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TTACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGGCATGTTGGTTGTCCTaGCTGTACAGGTTCTTACTC +
Preference number: 4 (lower is better)
Translates to: LPGNAVDVDSPSKAGSSRACWLS*LYRFLL
Trigger: GAGTAAGAACCTGTACAGCCAGGACAACCAACATGC...CCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp AGGGCAGATGATCAAAGTAGGGAGAATTTTAACACCAGTCATGGGACACAGTGGCTCGTACCCATCCTATaGTCGAGCACCCCATATAGC +
Preference number: 4 (lower is better)
Translates to: RADDQSRENFNTSHGTQWLVPIL*SSTPYS
Trigger: GCTATATGGGGTGCTCGACCATAGGATGGGTACGAG...CCACTGTGTCCCATGACTGGTGTTAAAATTCTCCCTACTTTGATCATCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GGGCTTCGATGTACTCATCACATTTCTTGTAGCCGGCATTCAGCAACTCATACTTGGCGAGCCGTGACATaGCATCTGCAGCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: GLRCTHHISCSRHSATHTWRAVT*HLQLHS
Trigger: AGAATGAAGCTGCAGATGCCATGTCACGGCTCGCCA...AGTATGAGTTGCTGAATGCCGGCTACAAGAAATGTGATGAGTACATCGAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR CCA 90 bp GTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAGGAGGACCAGCACCACTGTCAGATCATACTaGGAGCAAAGATCTTCAAGA +
Preference number: 4 (lower is better)
Translates to: VDVDSPSKAGSSRRRTSTTVRSY*EQRSSR
Trigger: TCTTGAAGATCTTTGCTCCCAGTATGATCTGACAGT...GGTGCTGGTCCTCCTCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TGTTCCTCGGTGGTGGAACAGACTGCAAGGTACAAGAACAGGCTTCTTCTAGCCGCTTGGATGTGCAGATaGAATATCTCACTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: CSSVVEQTARYKNRLLLAAWMCR*NISLSQ
Trigger: CTGAGACAGTGAGATATTCCATCTGCACATCCAAGC...GGCTAGAAGAAGCCTGTTCTTGTACCTTGCAGTCTGTTCCACCACCGAGGAACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp GTTCCATACTCCTTGGCAGATTCCAGCTTCCATGACTACCATCCTGCTTCTCTTGGCCTACTTAAGGCCTaGACAACCCAAAAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: VPYSLADSSFHDYHPASLGLLKA*TTQKAS
Trigger: GGAAGCTTTTTGGGTTGTCCAGGCCTTAAGTAGGCC...AAGAGAAGCAGGATGGTAGTCATGGAAGCTGGAATCTGCCAAGGAGTATGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616246.4
3UTR CAA 72 bp ACAAACAGTAGGGTTTACCAGGCAATGCTGTTGATGTaGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: TNSRVYQAMLLM*IVLARLAVPGG
Trigger: TCCTCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTAAACCCTACTGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp GGGCTTCGATGTACTCATCACATTTCTTGTAGCCGGCATTCAGCAACTCATACTCCACATCTCCATCGATaGGGTGTCTCTCTACGATGT +
Preference number: 4 (lower is better)
Translates to: GLRCTHHISCSRHSATHTPHLHR*GVSLRC
Trigger: ACATCGTAGAGAGACACCTCATCGATGGAGATGTGG...AGTATGAGTTGCTGAATGCCGGCTACAAGAAATGTGATGAGTACATCGAAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR TCA 90 bp AAGATCATGTTGTCTATGGGGAGAGATTGTGATTTACCTGTAACACCAGTGTCATGTTCTCTCTGGGGGTaGCACACACCACAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: KIMLSMGRDCDLPVTPVSCSLWG*HTPQPH
Trigger: GTGAGGCTGTGGTGTGTGTCACCCCCAGAGAGAACA...TGACACTGGTGTTACAGGTAAATCACAATCTCTCCCCATAGACAACATGATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR TCA 90 bp AGGGCAGATGATCAAAGTAGGGAGAATTTTAACACCAGTCATGGGACACAGTGGTCTTCCCAGGTTACATaGGAACTGGTGATCTCGGTG +
Preference number: 4 (lower is better)
Translates to: RADDQSRENFNTSHGTQWSSQVT*ELVISV
Trigger: CACCGAGATCACCAGTTCTCATGTAACCTGGGAAGA...CCACTGTGTCCCATGACTGGTGTTAAAATTCTCCCTACTTTGATCATCTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp TTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTGAGCTCTCATCCTGCAGCGCCCAACTaGGTACTCACTCACGCAAGG +
Preference number: 4 (lower is better)
Translates to: FISSKQVQRLKCNPLSSHPAAPN*VLTHAR
Trigger: CCTTGCGTGAGTGAGTACTCAGTTGGGCGCTGCAGG...ATGAGAGCTCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp ATCCAAGAACCAATGGCTACCCCGGGTACCTTAACAGCATCAACTCAGAACTTAGGGCCTCATGACAGTTaGACCTCAGTTACAAATCCC +
Preference number: 4 (lower is better)
Translates to: IQEPMATPGTLTASTQNLGPHDS*TSVTNP
Trigger: GGGATTTGTAACTGAGGTGCAACTGTCATGAGGCCC...TAAGTTCTGAGTTGATGCTGTTAAGGTACCCGGGGTAGCCATTGGTTCTTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TTACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGTTCTGCTCCAAGGTCTaGCTTGTTCTCAAGTGCTAT +
Preference number: 4 (lower is better)
Translates to: LPGNAVDVDSPSKAGSSRFCSKV*LVLKCY
Trigger: ATAGCACTTGAGAACAAGGCAGACCTTGGAGCAGAA...CCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp CCTATGATTCAATTCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGATTCCAAAACAGATGTaGCTTATTTTCTTGGCCACA +
Preference number: 4 (lower is better)
Translates to: PMIQFYPPLAFARIPVVLIPKQM*LIFLAT
Trigger: TGTGGCCAAGAAAATAAGCCACATCTGTTTTGGAAT...CAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGAATTGAATCATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp CCTTGGCGGTGCCATCTTTATTATTCCCAGCCACAAGTTATAGCCACAACCTCTCTGTGCTGTGATAATTaGAGTGCTGATGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: PWRCHLYYSQPQVIATTSLCCDN*SADGLG
Trigger: TCCAAGGCCATCAGCACTCCAATTATCACAGCACAG...AGAGGTTGTGGCTATAACTTGTGGCTGGGAATAATAAAGATGGCACCGCCAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GGCCAAAAATCACTCGGTCACGAATTCCTAATCCACAATCACATCAGTAGGAAGCTCTGCTCGTCAATGTaGATGACAGCTCTGGACACC +
Preference number: 4 (lower is better)
Translates to: GQKSLGHEFLIHNHISRKLCSSM*MTALDT
Trigger: GGTGTCCAGAGCTGTCATCCACATTGACGAGCAGAG...CTTCCTACTGATGTGATTGTGGATTAGGAATTCGTGACCGAGTGATTTTTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GATTGTGATTTACCTGTAACACCAGTGTCAGGTGATTATACCATGCTCCCTGACCTCTGCTCGTCAATGTaGATGACAGCTCTGGACACC +
Preference number: 4 (lower is better)
Translates to: DCDLPVTPVSGDYTMLPDLCSSM*MTALDT
Trigger: GGTGTCCAGAGCTGTCATCCACATTGACGAGCAGAG...GTCAGGGAGCATGGTATAATCACCTGACACTGGTGTTACAGGTAAATCACAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp TGGCTCTTCCCAGGTTACATGAGAACTGGTGATCTCGGTGGGGTCTCAAGTAGATCTTTATACATCAGCTaGAGACAGGACAAGGAGTCA +
Preference number: 4 (lower is better)
Translates to: WLFPGYMRTGDLGGVSSRSLYIS*RQDKES
Trigger: TGACTCCTTGTCCTGTCTCCAGCTGATGTATAAAGA...TCTACTTGAGACCCCACCGAGATCACCAGTTCTCATGTAACCTGGGAAGAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TGGCTCTTCCCAGGTTACATGAGAACTGGTGATCTCGGTGGGGTCTCAAGTAGATTTAAACCCAACCACTaGCCAAAAATCACTCGGTCA +
Preference number: 4 (lower is better)
Translates to: WLFPGYMRTGDLGGVSSRFKPNH*PKITRS
Trigger: TGACCGAGTGATTTTTGGCCAGTGGTTGGGTTTAAA...TCTACTTGAGACCCCACCGAGATCACCAGTTCTCATGTAACCTGGGAAGAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GGCCAAAAATCACTCGGTCACGAATTCCTAATCCACAATCACATCAGTAGGAAGGGGGGTACCCCTTTATaGCTCTTCCCAGGTTACATG +
Preference number: 4 (lower is better)
Translates to: GQKSLGHEFLIHNHISRKGGTPL*LFPGYM
Trigger: CATGTAACCTGGGAAGAGCCATAAAGGGGTACCCCC...CTTCCTACTGATGTGATTGTGGATTAGGAATTCGTGACCGAGTGATTTTTGGCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp AGGAAGATCATGTTGTCTATGGGGAGAGATTGTGATTTACCTGTAACACCAGTGCAGGCTGGAGTGCATTaGCGCAATTTTGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: RKIMLSMGRDCDLPVTPVQAGVH*RNFGSP
Trigger: CGGTGAGCCAAAATTGCGCCAATGCACTCCAGCCTG...CACTGGTGTTACAGGTAAATCACAATCTCTCCCCATAGACAACATGATCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp AGGAAGATCATGTTGTCTATGGGGAGAGATTGTGATTTACCTGTAACACCAGTGAGGCCTGTTCCTCGGTaGTGGAACAGACTGCAAGGT +
Preference number: 4 (lower is better)
Translates to: RKIMLSMGRDCDLPVTPVRPVPR*WNRLQG
Trigger: ACCTTGCAGTCTGTTCCACCACCGAGGAACAGGCCT...CACTGGTGTTACAGGTAAATCACAATCTCTCCCCATAGACAACATGATCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR TCA 90 bp ACAGTGGGGAGCACAAACAGTAGGGTTTACCAGGCAATGCTGTTGATGTTGATAGCGCATCTCCTCAGGTaGCTTCATTCCAAAACAGAT +
Preference number: 4 (lower is better)
Translates to: TVGSTNSRVYQAMLLMLIAHLLR*LHSKTD
Trigger: ATCTGTTTTGGAATGAAGTCACCTGAGGAGATGCGC...TATCAACATCAACAGCATTGCCTGGTAAACCCTACTGTTTGTGCTCCCCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp TTACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAACCAGTTTTTCCAGTaGCGCTTACATGCTGACTTT +
Preference number: 4 (lower is better)
Translates to: LPGNAVDVDSPSKAGSSRNQFFQ*RLHADF
Trigger: AAAGTCAGCATGTAAGCGTCACTGGAAAAACTGGTT...CCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp GTCTCAAGTAGAAGCCCTGAATTAGTGTTCATTAACAAACTTAATCCTTTGTCCTCCGGGCGGCCTCGATaGCCAGAGTTTTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: VSSRSPELVFINKLNPLSSGRPR*PEFSPP
Trigger: AGGTGGAGAAAACTCTGGGCATCGAGGCCGCCCGGA...GGACAAAGGATTAAGTTTGTTAATGAACACTAATTCAGGGCTTCTACTTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp AGGAAGATCATGTTGTCTATGGGGAGAGATTGTGATTTACCTGTAACACCAGTGTCCTGTCGATGCTCATaGCGTGGTTCACCATGGTGT +
Preference number: 4 (lower is better)
Translates to: RKIMLSMGRDCDLPVTPVSCRCS*RGSPWC
Trigger: ACACCATGGTGAACCACGGCATGAGCATCGACAGGA...CACTGGTGTTACAGGTAAATCACAATCTCTCCCCATAGACAACATGATCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp CCCGTCCCAGGGAGCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGATCAGATCATCTTCATTaGTGCCAGACTTCAAATCAC +
Preference number: 4 (lower is better)
Translates to: PVPGSTKLFIHQLETGQGSDHLH*CQTSNH
Trigger: GTGATTTGAAGTCTGGCACCAATGAAGATGATCTGA...TCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGCTCCCTGGGACGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GTCTCAAGTAGAAGCCCTGAATTAGTGTTCATTAACAAACTTAATCCTTTGTCCGTGATGCGGTCCAGCTaGTACAGCACACGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: VSSRSPELVFINKLNPLSVMRSS*YSTRGS
Trigger: AGAGCCCCGTGTGCTGTACCAGCTGGACCGCATCAC...GGACAAAGGATTAAGTTTGTTAATGAACACTAATTCAGGGCTTCTACTTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GGCCAAAAATCACTCGGTCACGAATTCCTAATCCACAATCACATCAGTAGGAAGAGAAACTTTTCTACTTaGGTGGGGGTGATGCGGTCC +
Preference number: 4 (lower is better)
Translates to: GQKSLGHEFLIHNHISRKRNFST*VGVMRS
Trigger: GGACCGCATCACCCCCACCCAAGTAGAAAAGTTTCT...CTTCCTACTGATGTGATTGTGGATTAGGAATTCGTGACCGAGTGATTTTTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GATTGTGATTTACCTGTAACACCAGTGTCAGGTGATTATACCATGCTCCCTGACGCAGCACGTAGTACATaGAGCTCTTGCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: DCDLPVTPVSGDYTMLPDAARST*SSCCSL
Trigger: GAGAGAACAGCAAGAGCTCCATGTACTACGTGCTGC...GTCAGGGAGCATGGTATAATCACCTGACACTGGTGTTACAGGTAAATCACAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp AAGATCATGTTGTCTATGGGGAGAGATTGTGATTTACCTGTAACACCAGTGTCACCTGCACCACCACCTTaGGGAGATCCTCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: KIMLSMGRDCDLPVTPVSPAPPP*GDPLSG
Trigger: TCCTGAAAGAGGATCTCCCCAAGGTGGTGGTGCAGG...TGACACTGGTGTTACAGGTAAATCACAATCTCTCCCCATAGACAACATGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR TCA 90 bp GCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGAGTCAAGGTCAGGCATCCACTCTCTTTCCTaGGAGATTTCCTCTAAATCG +
Preference number: 4 (lower is better)
Translates to: AQNSLYISWRQDKESRSGIHSLS*EISSKS
Trigger: CGATTTAGAGGAAATCTCTCAGGAAAGAGAGTGGAT...GCCTGACCTTGACTCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp GGCCAAAAATCACTCGGTCACGAATTCCTAATCCACAATCACATCAGTAGGAAGACCTCAGGGCCGTTTTaGACCAGTTTCCTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: GQKSLGHEFLIHNHISRKTSGPF*TSFLKK
Trigger: TTTCTTGAGGAAACTGGTTCAAAACGGCCCTGAGGT...CTTCCTACTGATGTGATTGTGGATTAGGAATTCGTGACCGAGTGATTTTTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp TGTTCAGGGCTTCGATGTACTCATCACATTTCTTGTAGCCGGCATTCAGCAACTCCTGTTAGAAAATCCTaGATAGCAGCAATCAGCGGT +
Preference number: 4 (lower is better)
Translates to: CSGLRCTHHISCSRHSATPVRKS*IAAISG
Trigger: ACCGCTGATTGCTGCTATTCAGGATTTTCTAACAGG...AGTTGCTGAATGCCGGCTACAAGAAATGTGATGAGTACATCGAAGCCCTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR TCA 90 bp TTACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGACAGGCAATCATCTGTaGTATGTTAATGAAGGAACC +
Preference number: 4 (lower is better)
Translates to: LPGNAVDVDSPSKAGSSRTGNHL*YVNEGT
Trigger: GGTTCCTTCATTAACATATCACAGATGATTGCCTGT...CCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp ATCCAAGAACCAATGGCTACCCCGGGTACCTTAACAGCATCAACTCAGAACTTATGTGGCAGCAGGTTTTaGAGATCATCTGTAAGATGC +
Preference number: 4 (lower is better)
Translates to: IQEPMATPGTLTASTQNLCGSRF*RSSVRC
Trigger: GCATCTTACAGATGATCTGCAAAACCTGCTGCCACA...TAAGTTCTGAGTTGATGCTGTTAAGGTACCCGGGGTAGCCATTGGTTCTTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TCACACGTATTTTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTCTCCTTCAGGATCAGTaGCTCCAGGGTCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SHVFLFLPSRYRDSNVTLLLQDQ*LQGLLS
Trigger: GCTGAGGAGACCCTGGAGGCACTGATCCTGAAGGAG...AAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAAAATACGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GTCTCAAGTAGAAGCCCTGAATTAGTGTTCATTAACAAACTTAATCCTTTGTCCGCCTTCAGCAGTCCTTaGCCAGGTGTGACATCACCG +
Preference number: 4 (lower is better)
Translates to: VSSRSPELVFINKLNPLSAFSSP*PGVTSP
Trigger: CGGTGATGTCACACCTGGCCAAGGACTGCTGAAGGC...GGACAAAGGATTAAGTTTGTTAATGAACACTAATTCAGGGCTTCTACTTGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp AGGGCAGATGATCAAAGTAGGGAGAATTTTAACACCAGTCATGGGACACAGTGGGCTTGGATGTGCAGATaGAATATCTCACTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: RADDQSRENFNTSHGTQWAWMCR*NISLSQ
Trigger: CTGAGACAGTGAGATATTCCATCTGCACATCCAAGC...CCACTGTGTCCCATGACTGGTGTTAAAATTCTCCCTACTTTGATCATCTGCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTGAGCTCTCATCCTGCACCACCACCTTaGGGAGATCCTCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: FISSKQVQRLKCNPLSSHPAPPP*GDPLSG
Trigger: TCCTGAAAGAGGATCTCCCCAAGGTGGTGGTGCAGG...ATGAGAGCTCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TCACACGTATTTTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTCTGCTCTCGAACTCCTaGGCTCAAGTGATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SHVFLFLPSRYRDSNVTLLLSNS*AQVICP
Trigger: GGGGCAGATCACTTGAGCCCAGGAGTTCGAGAGCAG...AAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAAAATACGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp ATCCAAGAACCAATGGCTACCCCGGGTACCTTAACAGCATCAACTCAGAACTTACCATACTTGAGCTCTTaGGCCATCTTTTCTCGATTT +
Preference number: 4 (lower is better)
Translates to: IQEPMATPGTLTASTQNLPYLSS*AIFSRF
Trigger: AAATCGAGAAAAGATGGCTCAAGAGCTCAAGTATGG...TAAGTTCTGAGTTGATGCTGTTAAGGTACCCGGGGTAGCCATTGGTTCTTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp GGGCTTCGATGTACTCATCACATTTCTTGTAGCCGGCATTCAGCAACTCATACTCCATACTTGAGCTCTTaGGCCATCTTTTCTCGATTT +
Preference number: 4 (lower is better)
Translates to: GLRCTHHISCSRHSATHTPYLSS*AIFSRF
Trigger: AAATCGAGAAAAGATGGCTCAAGAGCTCAAGTATGG...AGTATGAGTTGCTGAATGCCGGCTACAAGAAATGTGATGAGTACATCGAAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR TCA 90 bp TTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTGAGCTCTCATCCTTGTGAAGCAGCTTaGAGAGCCCGGTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: FISSKQVQRLKCNPLSSHPCEAA*RARFQC
Trigger: ACATTGGAACCGGGCTCTTCAAGCTGCTTCACAAGG...ATGAGAGCTCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp TGTGATTTACCTGTAACACCAGTGTCAGGTGATTATACCATGCTCCCTGACTCGTATGGGGAGAGATTGTaGTTTACCTGTAACACCAGT +
Preference number: 4 (lower is better)
Translates to: CDLPVTPVSGDYTMLPDSYGERL*FTCNTS
Trigger: ACTGGTGTTACAGGTAAATCACAATCTCTCCCCATA...CGAGTCAGGGAGCATGGTATAATCACCTGACACTGGTGTTACAGGTAAATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR GCA 90 bp TCACACGTATTTTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTGAGGGCTTCTCTGATTaGTGGCATAGGTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: SHVFLFLPSRYRDSNVTLEGFSD*WHRWGP
Trigger: AGGTCCCCACCTATGCCAGCAATCAGAGAAGCCCTC...AAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAAAATACGTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TCACACGTATTTTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTACAGACTCCAGACCCTaGAGCGCCCAACTGAGTACT +
Preference number: 4 (lower is better)
Translates to: SHVFLFLPSRYRDSNVTLTDSRP*SAQLST
Trigger: AGTACTCAGTTGGGCGCTGCAGGGTCTGGAGTCTGT...AAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAAAATACGTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp AAGATCATGTTGTCTATGGGGAGAGATTGTGATTTACCTGTAACACCAGTGTCAGCAGCGTCAAAGAGATaGTCAGCCGTCTTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: KIMLSMGRDCDLPVTPVSAASKR*SAVFSK
Trigger: CTTTGAGAAGACGGCTGACCATCTCTTTGACGCTGC...TGACACTGGTGTTACAGGTAAATCACAATCTCTCCCCATAGACAACATGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp GCATTCAGCAACTCATACTTGGCCTTCAGCAGTCCTTGGCCAGGTGTGACATCAATCAACTCACTGTTCTaGATTGTAACATCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: AFSNSYLAFSSPWPGVTSINSLF*IVTSLG
Trigger: TCCTAAAGATGTTACAATCCAGAACAGTGAGTTGAT...TGATGTCACACCTGGCCAAGGACTGCTGAAGGCCAAGTATGAGTTGCTGAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
3UTR CAA 72 bp AGTTGCACCTCAGTTACAAATCCCAGACGGCTCTATTaGCTTAAACCAGTTTTTCCAGTGACGCTTACATGC +
Preference number: 4 (lower is better)
Translates to: SCTSVTNPRRLY*LKPVFPVTLTC
Trigger: GCATGTAAGCGTCACTGGAAAAACTGGTTTAAGCAAATAGAGCCGTCTGGGATTTGTAACTGAGGTGCAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp GGCCAAAAATCACTCGGTCACGAATTCCTAATCCACAATCACATCAGTAGGAAGAGACTGAAGGAAATTTaGTACAATGGGATCCACCAC +
Preference number: 4 (lower is better)
Translates to: GQKSLGHEFLIHNHISRKRLKEI*YNGIHH
Trigger: GTGGTGGATCCCATTGTATCAAATTTCCTTCAGTCT...CTTCCTACTGATGTGATTGTGGATTAGGAATTCGTGACCGAGTGATTTTTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp TCACACGTATTTTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTAATCCCAGTCCTCCATaGTCATCTGGGTCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SHVFLFLPSRYRDSNVTLNPSPP*SSGSWL
Trigger: GAGCCAAGACCCAGATGATCATGGAGGACTGGGATT...AAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAAAATACGTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TCACACGTATTTTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTCCTGTCGATGCTCATaGCGTGGTTCACCATGGTGT +
Preference number: 4 (lower is better)
Translates to: SHVFLFLPSRYRDSNVTLSCRCS*RGSPWC
Trigger: ACACCATGGTGAACCACGGCATGAGCATCGACAGGA...AAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAAAATACGTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TCACACGTATTTTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTCCTTGGTTCGCAGGTTaGCCCTCACTGGATTGTCAT +
Preference number: 4 (lower is better)
Translates to: SHVFLFLPSRYRDSNVTLPWFAG*PSLDCH
Trigger: ATGACAATCCAGTGAGGGCCAACCTGCGAACCAAGG...AAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAAAATACGTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp AAGATCATGTTGTCTATGGGGAGAGATTGTGATTTACCTGTAACACCAGTGTCAGCTTCACACGGAGCTTaGATGTGCAGATGGAATATC +
Preference number: 4 (lower is better)
Translates to: KIMLSMGRDCDLPVTPVSASHGA*MCRWNI
Trigger: GATATTCCATCTGCACATCCAAGCTCCGTGTGAAGC...TGACACTGGTGTTACAGGTAAATCACAATCTCTCCCCATAGACAACATGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp TTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTGAGCTCTCATGCAGCACGTAGTACATaGAGCTCTTGCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: FISSKQVQRLKCNPLSSHAARST*SSCCSL
Trigger: GAGAGAACAGCAAGAGCTCCATGTACTACGTGCTGC...ATGAGAGCTCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp AGGAAGATCATGTTGTCTATGGGGAGAGATTGTGATTTACCTGTAACACCAGTGTTGTTCCATACTCCTTaGCAGATTCCAGCTTCCATG +
Preference number: 4 (lower is better)
Translates to: RKIMLSMGRDCDLPVTPVLFHTP*QIPASM
Trigger: CATGGAAGCTGGAATCTGCCAAGGAGTATGGAACAA...CACTGGTGTTACAGGTAAATCACAATCTCTCCCCATAGACAACATGATCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp GTTCCATACTCCTTGGCAGATTCCAGCTTCCATGACTACCATCCTGCTTCTCTTAGATCATGTTGTCTATaGGGAGAGATTGTGATTTAC +
Preference number: 4 (lower is better)
Translates to: VPYSLADSSFHDYHPASLRSCCL*GEIVIY
Trigger: GTAAATCACAATCTCTCCCCATAGACAACATGATCT...AAGAGAAGCAGGATGGTAGTCATGGAAGCTGGAATCTGCCAAGGAGTATGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR GCA 90 bp TTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTGAGCTCTCATATAATGCTCAATTTGTaGAGCGAGGGCTGCCGATTG +
Preference number: 4 (lower is better)
Translates to: FISSKQVQRLKCNPLSSHIMLNL*SEGCRL
Trigger: CAATCGGCAGCCCTCGCTGCACAAATTGAGCATTAT...ATGAGAGCTCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTGAGCTCTCATCACGGAGCTTGGATGTaGAGATGGAATATCTCACTG +
Preference number: 4 (lower is better)
Translates to: FISSKQVQRLKCNPLSSHHGAWM*RWNISL
Trigger: CAGTGAGATATTCCATCTGCACATCCAAGCTCCGTG...ATGAGAGCTCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GTCTCAAGTAGAAGCCCTGAATTAGTGTTCATTAACAAACTTAATCCTTTGTCCAGTCAAGGTCAGGCATaGTCCCCTCTTTCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: VSSRSPELVFINKLNPLSSQGQA*SPLSLD
Trigger: GTCCAAAGAAAGAGGGGACCATGCCTGACCTTGACT...GGACAAAGGATTAAGTTTGTTAATGAACACTAATTCAGGGCTTCTACTTGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp TTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTGAGCTCTCATCGATGTCACCATACTTaGGCTCTTGAGCCATCTTTT +
Preference number: 4 (lower is better)
Translates to: FISSKQVQRLKCNPLSSHRCHHT*ALEPSF
Trigger: AAAAGATGGCTCAAGAGCTCAAGTATGGTGACATCG...ATGAGAGCTCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GGCCAAAAATCACTCGGTCACGAATTCCTAATCCACAATCACATCAGTAGGAAGTTCACCATGGTGTACTaGATTTCATTGATGATCGTT +
Preference number: 4 (lower is better)
Translates to: GQKSLGHEFLIHNHISRKFTMVY*ISLMIV
Trigger: AACGATCATCAATGAAATCCAGTACACCATGGTGAA...CTTCCTACTGATGTGATTGTGGATTAGGAATTCGTGACCGAGTGATTTTTGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp GATTGTGATTTACCTGTAACACCAGTGTCAGGTGATTATACCATGCTCCCTGACTTCACCATGGTGTACTaGATTTCATTGATGATCGTT +
Preference number: 4 (lower is better)
Translates to: DCDLPVTPVSGDYTMLPDFTMVY*ISLMIV
Trigger: AACGATCATCAATGAAATCCAGTACACCATGGTGAA...GTCAGGGAGCATGGTATAATCACCTGACACTGGTGTTACAGGTAAATCACAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CCA 90 bp GTCTCAAGTAGAAGCCCTGAATTAGTGTTCATTAACAAACTTAATCCTTTGTCCCATGGAGAATGGGTTTaGCTCTTGTCACAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: VSSRSPELVFINKLNPLSHGEWV*LLSQGR
Trigger: TCTACCCTGTGACAAGAGCCAAACCCATTCTCCATG...GGACAAAGGATTAAGTTTGTTAATGAACACTAATTCAGGGCTTCTACTTGAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp TCACACGTATTTTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTCTTGCCAACCAGTATTaGAGCAATGATTTGGCAAGC +
Preference number: 4 (lower is better)
Translates to: SHVFLFLPSRYRDSNVTLLANQY*SNDLAS
Trigger: GCTTGCCAAATCATTGCTTCAATACTGGTTGGCAAG...AAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAAAATACGTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR TCA 90 bp GTCTCAAGTAGAAGCCCTGAATTAGTGTTCATTAACAAACTTAATCCTTTGTCCGATCTTCAAGAGATTTaGCAAGCCTTCGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: VSSRSPELVFINKLNPLSDLQEI*QAFAAC
Trigger: ACATGCAGCGAAGGCTTGTCAAATCTCTTGAAGATC...GGACAAAGGATTAAGTTTGTTAATGAACACTAATTCAGGGCTTCTACTTGAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp GTCTCAAGTAGAAGCCCTGAATTAGTGTTCATTAACAAACTTAATCCTTTGTCCCGGGGTTACAAGATTTaGTTTAGTCCCCATCAGAAC +
Preference number: 4 (lower is better)
Translates to: VSSRSPELVFINKLNPLSRGYKI*FSPHQN
Trigger: GTTCTGATGGGGACTAAAGCAAATCTTGTAACCCCG...GGACAAAGGATTAAGTTTGTTAATGAACACTAATTCAGGGCTTCTACTTGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR GCA 90 bp TCACACGTATTTTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTTCTCCTTTCCACTCTaGTCGTCAATGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: SHVFLFLPSRYRDSNVTLFSFPL*SSMWMT
Trigger: TGTCATCCACATTGACGAGCAGAGTGGAAAGGAGAA...AAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAAAATACGTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CCA 90 bp TTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTGAGCTCTCATGAAGAAAAACTCAGTTaGTGTCAAACCGGAATAAAA +
Preference number: 4 (lower is better)
Translates to: FISSKQVQRLKCNPLSSHEEKLS*CQTGIK
Trigger: TTTTATTCCGGTTTGACACCAACTGAGTTTTTCTTC...ATGAGAGCTCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp TCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGCTCGGATCAGGCAGGGGGCTGTTGCTCTaGTCCAGCTCCCGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: STLPWPLHGSQWSWLGSGRGLLL*SSSRRQ
Trigger: CTGCCTCCGGGAGCTGGACAAGAGCAACAGCCCCCT...GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS GCA 90 bp CCGGGACGCCTCCTTGGCACTCGGGAGGCCAGATTAGAGAAACGATaGCCCCAGCACCTCCTGGGGCTGCTTCTGGACTCGCCGCTAACA +
Preference number: 5 (lower is better)
Translates to: PGRLLGTREARLEKR*PQHLLGLLLDSPLT
Trigger: TGTTAGCGGCGAGTCCAGAAGCAGCCCCAGGAGGTGCTGGGGGCATCGTTTCTCTAATCTGGCCTCCCGAGTGCCAAGGAGGCGTCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp TCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGCTCGGATCAGGCCAGTACTGCTTGCCCTaGGTTCGCAGGTTGGCCCTC +
Preference number: 5 (lower is better)
Translates to: STLPWPLHGSQWSWLGSGQYCLP*VRRLAL
Trigger: GAGGGCCAACCTGCGAACCAAGGGCAAGCAGTACTG...GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp CTGTTGCTCTTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATCGGCCTTCAGCAGTCCTaGGCCAGGTGTGACATCACC +
Preference number: 5 (lower is better)
Translates to: LLLLSSSRRQALPAWSRIGLQQS*ARCDIT
Trigger: GGTGATGTCACACCTGGCCAAGGACTGCTGAAGGCC...GATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGAGCAACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS CCA 90 bp CGGAACTGCTCCTTCACCATGATGACCGCTGCCGGGACGCCTCCTTaGCACTCGGGAGGCCAGATTAGAGAAACGATGCCCCCAGCACCT +
Preference number: 5 (lower is better)
Translates to: RNCSFTMMTAAGTPP*HSGGQIRETMPPAP
Trigger: AGGTGCTGGGGGCATCGTTTCTCTAATCTGGCCTCCCGAGTGCCAAGGAGGCGTCCCGGCAGCGGTCATCATGGTGAAGGAGCAGTTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp TCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGCTCGGATCAGGCTTGGCCCTCACTGGATaGTCATCGCTAGGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: STLPWPLHGSQWSWLGSGLALTG*SSLGLR
Trigger: CCTCAGGCCTAGCGATGACAATCCAGTGAGGGCCAA...GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp TTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATCACAGACAGCGCCATAATGCTCAATTaGTGCAGCGAGGGCTGCCGA +
Preference number: 5 (lower is better)
Translates to: LSSSRRQALPAWSRITDSAIMLN*CSEGCR
Trigger: TCGGCAGCCCTCGCTGCACAAATTGAGCATTATGGC...GCTGTCTGTGATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR CAA 90 bp CACTGGTGTGAGCTGCACCCTATCAGAGGAGAAGCTGCTCCTGGGGATGCCAAGATGGTGAGGGGGCTGTaGCTCTTGTCCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: HWCELHPIRGEAAPGDAKMVRGL*LLSSSR
Trigger: CCGGGAGCTGGACAAGAGCAACAGCCCCCTCACCAT...CTTGGCATCCCCAGGAGCAGCTTCTCCTCTGATAGGGTGCAGCTCACACCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp CAGCCAGGCTGCTGCTGCAGCTTGCCCGTGTTCAGGGCTTCGATGTACTCATCAATGGTGAGGGGGCTGTaGCTCTTGTCCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: QPGCCCSLPVFRASMYSSMVRGL*LLSSSR
Trigger: CCGGGAGCTGGACAAGAGCAACAGCCCCCTCACCAT...TGATGAGTACATCGAAGCCCTGAACACGGGCAAGCTGCAGCAGCAGCCTGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR CAA 90 bp CACAGACTCCAGACCCTGCAGCGCCCAACTGAGTACTCACTCACGCAAGGTGAGAAGATCAGGGGCCTCTaGGGAGGGTTCGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: HRLQTLQRPTEYSLTQGEKIRGL*GGFGSL
Trigger: CAGGGACCCGAACCCTCCCAAGAGGCCCCTGATCTT...CTCACCTTGCGTGAGTGAGTACTCAGTTGGGCGCTGCAGGGTCTGGAGTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp ACCATGCTCCCTGACTCGGAGCTTTACTGCAGGCCACTCGGGTCAGGCCTGTTCATACAGGTCTCAGGGTaGGGGCCAGGCACACACAGA +
Preference number: 5 (lower is better)
Translates to: TMLPDSELYCRPLGSGLFIQVSG*GPGTHR
Trigger: TCTGTGTGTGCCTGGCCCCAACCCTGAGACCTGTAT...GAACAGGCCTGACCCGAGTGGCCTGCAGTAAAGCTCCGAGTCAGGGAGCATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CAA 90 bp TACTTGGCCTTCAGCAGTCCTTGGCCAGGTGTGACATCACCGATCCCAATTGAGAGGGGGCTGTTGCTCTaGTCCAGCTCCCGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: YLAFSSPWPGVTSPIPIERGLLL*SSSRRQ
Trigger: CTGCCTCCGGGAGCTGGACAAGAGCAACAGCCCCCT...CTCAATTGGGATCGGTGATGTCACACCTGGCCAAGGACTGCTGAAGGCCAAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR CAA 90 bp TCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGCTCGGATCAGGCGGATGTGGAATTCATTaGTGTCGAAGATCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: STLPWPLHGSQWSWLGSGGCGIH*CRRSGA
Trigger: GGCCCCTGATCTTCGACACAAATGAATTCCACATCC...GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp TGGCTCTTCCCAGGTTACATGAGAACTGGTGATCTCGGTGGGGTCTCAAGTAGAGGCTGCTGCTGCAGCTaGCCCGTGTTCAGGGCTTCG +
Preference number: 5 (lower is better)
Translates to: WLFPGYMRTGDLGGVSSRGCCCS*PVFRAS
Trigger: CGAAGCCCTGAACACGGGCAAGCTGCAGCAGCAGCC...TCTACTTGAGACCCCACCGAGATCACCAGTTCTCATGTAACCTGGGAAGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS TCA 90 bp ACTGCAGCACGTAGTACATGGAGCTCTTGCTGTTCTCTCTGGGGGTaGCACACACCACAGCCTCACCATGAACAGCCACATCACCGGGCT +
Preference number: 5 (lower is better)
Translates to: TAARSTWSSCCSLWG*HTPQPHHEQPHHRA
Trigger: AGCCCGGTGATGTGGCTGTTCATGGTGAGGCTGTGGTGTGTGTCACCCCCAGAGAGAACAGCAAGAGCTCCATGTACTACGTGCTGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS TCA 90 bp AAGATCAGGGGCCTCTTGGGAGGGTTCGGGTCCCTGTCAGCCTTGTaGAGCAGCTTGAAGAGCCCGGTTCCAATGTTCATTGGGATTCCC +
Preference number: 5 (lower is better)
Translates to: KIRGLLGGFGSLSAL*SSLKSPVPMFIGIP
Trigger: GGGAATCCCAATGAACATTGGAACCGGGCTCTTCAAGCTGCTTCACAAGGCTGACAGGGACCCGAACCCTCCCAAGAGGCCCCTGATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS GCA 90 bp AAACAGATGTGGCTTATTTTCTTGGCCACATCCGTCTCCCGGAACTaGTCCTTCACCATGATGACCGCTGCCGGGACGCCTCCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: KQMWLIFLATSVSRN*SFTMMTAAGTPPWH
Trigger: GTGCCAAGGAGGCGTCCCGGCAGCGGTCATCATGGTGAAGGAGCAGTTCCGGGAGACGGATGTGGCCAAGAAAATAAGCCACATCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CCA 90 bp ACGTGCCTCCTGTCGATGCTCATGCCGTGGTTCACCATGGTGTACTaGATTTCATTGATGATCGTTGTCCGGGCGGCCTCGATGCCCAGA +
Preference number: 5 (lower is better)
Translates to: TCLLSMLMPWFTMVY*ISLMIVVRAASMPR
Trigger: TCTGGGCATCGAGGCCGCCCGGACAACGATCATCAATGAAATCCAGTACACCATGGTGAACCACGGCATGAGCATCGACAGGAGGCACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS-3UTR CAA 90 bp GGCTGTTGCTCTTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGAACCATACTTGAGCTCTaGAGCCATCTTTTCTCGATT +
Preference number: 5 (lower is better)
Translates to: GCCSCPAPGGRHCQRGHGTILEL*SHLFSI
Trigger: AATCGAGAAAAGATGGCTCAAGAGCTCAAGTATGGT...TCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGAGCAACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR CAA 90 bp CCGGCATTCAGCAACTCATACTTGGCCTTCAGCAGTCCTTGGCCAGGTGTGACAAGCGAGGGCTGCCGATaGAACAGCACCACATCTCCA +
Preference number: 5 (lower is better)
Translates to: PAFSNSYLAFSSPWPGVTSEGCR*NSTTSP
Trigger: TGGAGATGTGGTGCTGTTCAATCGGCAGCCCTCGCT...TGTCACACCTGGCCAAGGACTGCTGAAGGCCAAGTATGAGTTGCTGAATGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR CAA 90 bp CACTGGTGTGAGCTGCACCCTATCAGAGGAGAAGCTGCTCCTGGGGATGCCAAGTGTAGTGGCACGATCTaGGCTCACTACAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: HWCELHPIRGEAAPGDAKCSGTI*AHYNLH
Trigger: GTGGAGGTTGTAGTGAGCCAAGATCGTGCCACTACA...CTTGGCATCCCCAGGAGCAGCTTCTCCTCTGATAGGGTGCAGCTCACACCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS GCA 90 bp ATTGGAGGTGGTTCGGGTGCCCTTCACACCGTGTGTGGCCATGACTaGCCGCAGGTTATCACCTTCCACCAGAAGCTTGTACTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: IGGGSGALHTVCGHD*PQVITFHQKLVLLL
Trigger: AAGGAGAAGTACAAGCTTCTGGTGGAAGGTGATAACCTGCGGGCAGTCATGGCCACACACGGTGTGAAGGGCACCCGAACCACCTCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS-3UTR CAA 90 bp TGGCTCATCGTCAGGTGTGAAGACACCATGGGGAGCCGATGGATGTATGCAGTGGTTCTTACTCACAACTaGGATGTGCGCCTGCTGGCG +
Preference number: 5 (lower is better)
Translates to: WLIVRCEDTMGSRWMYAVVLTHN*DVRLLA
Trigger: CGCCAGCAGGCGCACATCCAAGTTGTGAGTAAGAAC...CACTGCATACATCCATCGGCTCCCCATGGTGTCTTCACACCTGACGATGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp GCAGCCAGGCTGCTGCTGCAGCTTGCCCGTGTTCAGGGCTTCGATGTACTCATCAACCTCAGGGCCGTTTaGAACCAGTTTCCTCAAGAA +
Preference number: 5 (lower is better)
Translates to: AARLLLQLARVQGFDVLINLRAV*NQFPQE
Trigger: TTCTTGAGGAAACTGGTTCAAAACGGCCCTGAGGTT...GATGAGTACATCGAAGCCCTGAACACGGGCAAGCTGCAGCAGCAGCCTGGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR CAA 90 bp CCTATGATTCAATTCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGACCCTAGGGTTCCTTaGTCCATGCTGCCACTCATC +
Preference number: 5 (lower is better)
Translates to: PMIQFYPPLAFARIPVVLDPRVP*SMLPLI
Trigger: GATGAGTGGCAGCATGGACAAAGGAACCCTAGGGTC...CAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGAATTGAATCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp CTTCCTGAGAAGGTGATGAGACTCGGGTCTGGATACACTGGGCTCTCTTCATGTCCCTGCACCACCACCTaGGGGAGATCCTCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: LPEKVMRLGSGYTGLSSCPCTTT*GRSSFR
Trigger: CCTGAAAGAGGATCTCCCCAAGGTGGTGGTGCAGGG...ACATGAAGAGAGCCCAGTGTATCCAGACCCGAGTCTCATCACCTTCTCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS TCA 90 bp TGTTATTGGAGGTGGTTCGGGTGCCCTTCACACCGTGTGTGGCCATaGCTGCCCGCAGGTTATCACCTTCCACCAGAAGCTTGTACTTCT +
Preference number: 5 (lower is better)
Translates to: CYWRWFGCPSHRVWP*LPAGYHLPPEACTS
Trigger: AGAAGTACAAGCTTCTGGTGGAAGGTGATAACCTGCGGGCAGTCATGGCCACACACGGTGTGAAGGGCACCCGAACCACCTCCAATAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS CCA 90 bp GGGGCATGTTGGTTGTCCTGGCTGTACAGGTTCTTACTCACAACTTaGATGTGCGCCTGCTGGCGCATCTCCTCAGGTGACTTCATTCCA +
Preference number: 5 (lower is better)
Translates to: GACWLSWLYRFLLTT*MCACWRISSGDFIP
Trigger: TGGAATGAAGTCACCTGAGGAGATGCGCCAGCAGGCGCACATCCAAGTTGTGAGTAAGAACCTGTACAGCCAGGACAACCAACATGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CCA 90 bp CTATGGTCGAGCACCCCATATAGCAAGGGGGCATGTTGGTTGTCCTaGCTGTACAGGTTCTTACTCACAACTTGGATGTGCGCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LWSSTPYSKGACWLS*LYRFLLTTWMCACW
Trigger: CCAGCAGGCGCACATCCAAGTTGTGAGTAAGAACCTGTACAGCCAGGACAACCAACATGCCCCCTTGCTATATGGGGTGCTCGACCATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CCA 90 bp TCCACCAGAAGCTTGTACTTCTCCTTTCCACTCTGCTCGTCAATGTaGATGACAGCTCTGGACACCTCTGGAATGCCCTGCACCACCACC +
Preference number: 5 (lower is better)
Translates to: STRSLYFSFPLCSSM*MTALDTSGMPCTTT
Trigger: GGTGGTGGTGCAGGGCATTCCAGAGGTGTCCAGAGCTGTCATCCACATTGACGAGCAGAGTGGAAAGGAGAAGTACAAGCTTCTGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS CCA 90 bp AGGTCGGAGAGCAGCATCACGTGCCTCCTGTCGATGCTCATGCCGTaGTTCACCATGGTGTACTGGATTTCATTGATGATCGTTGTCCGG +
Preference number: 5 (lower is better)
Translates to: RSESSITCLLSMLMP*FTMVYWISLMIVVR
Trigger: CCGGACAACGATCATCAATGAAATCCAGTACACCATGGTGAACCACGGCATGAGCATCGACAGGAGGCACGTGATGCTGCTCTCCGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS-3UTR CAA 90 bp TCTACCCTCCCCTGGCCTTTGCACGGATCCCAGTGGTCCTGGCTCGGATCAGGCAAGACTGAAGGAAATTaGATACAATGGGATCCACCA +
Preference number: 5 (lower is better)
Translates to: STLPWPLHGSQWSWLGSGKTEGN*IQWDPP
Trigger: TGGTGGATCCCATTGTATCAAATTTCCTTCAGTCTT...GCCTGATCCGAGCCAGGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp TTCCATTTAAAGTGTGCGTCACCCGCAGAAGACAACAGGTGCCGGAGTTCACTCCCCTTGGTTCGCAGGTaGGCCCTCACTGGATTGTCA +
Preference number: 5 (lower is better)
Translates to: FHLKCASPAEDNRCRSSLPLVRR*ALTGLS
Trigger: TGACAATCCAGTGAGGGCCAACCTGCGAACCAAGGG...GAGTGAACTCCGGCACCTGTTGTCTTCTGCGGGTGACGCACACTTTAAATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp AAAATATTGTTCTTGGATCCTGACCCTAGGGTTCCTTTGTCCATGCTGCCACTCGGCTGCTGCTGCAGCTaGCCCGTGTTCAGGGCTTCG +
Preference number: 5 (lower is better)
Translates to: KILFLDPDPRVPLSMLPLGCCCS*PVFRAS
Trigger: CGAAGCCCTGAACACGGGCAAGCTGCAGCAGCAGCC...GAGTGGCAGCATGGACAAAGGAACCCTAGGGTCAGGATCCAAGAACAATATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR CAA 90 bp GTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAGGAGGACCAGCACCTGTGCCCTCATGTACTaGTCCCTACAGGTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: VDVDSPSKAGSSRRRTSTCALMY*SLQVSR
Trigger: TCTGGAGACCTGTAGGGACAAGTACATGAGGGCACA...GGTGCTGGTCCTCCTCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp CACAGACTCCAGACCCTGCAGCGCCCAACTGAGTACTCACTCACGCAAGGTGAGATGGCCTTGGAAGCGTaGATGATCTCTTTAATCCGG +
Preference number: 5 (lower is better)
Translates to: HRLQTLQRPTEYSLTQGEMALEA*MISLIR
Trigger: CCGGATTAAAGAGATCATCAACGCTTCCAAGGCCAT...CTCACCTTGCGTGAGTGAGTACTCAGTTGGGCGCTGCAGGGTCTGGAGTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp TGGCTCATCGTCAGGTGTGAAGACACCATGGGGAGCCGATGGATGTATGCAGTGGGAGTGCTGATGGCCTaGGAAGCGTTGATGATCTCT +
Preference number: 5 (lower is better)
Translates to: WLIVRCEDTMGSRWMYAVGVLMA*EALMIS
Trigger: AGAGATCATCAACGCTTCCAAGGCCATCAGCACTCC...CACTGCATACATCCATCGGCTCCCCATGGTGTCTTCACACCTGACGATGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp TACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGACCCTGCACCACCACCTaGGGGAGATCCTCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: YQAMLLMLIVLARLAVPGPCTTT*GRSSFR
Trigger: CCTGAAAGAGGATCTCCCCAAGGTGGTGGTGCAGGG...TCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp AGGGCAGATGATCAAAGTAGGGAGAATTTTAACACCAGTCATGGGACACAGTGGACCCTCCCCTGGCCTTaGCACGGATCCCAGTGGTCC +
Preference number: 5 (lower is better)
Translates to: RADDQSRENFNTSHGTQWTLPWP*HGSQWS
Trigger: GGACCACTGGGATCCGTGCAAAGGCCAGGGGAGGGT...CCACTGTGTCCCATGACTGGTGTTAAAATTCTCCCTACTTTGATCATCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp GTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAGGAGGACCAGCACCGCTCCAAGGTCTGCCTaGTTCTCAAGTGCTATACGC +
Preference number: 5 (lower is better)
Translates to: VDVDSPSKAGSSRRRTSTAPRSA*FSSAIR
Trigger: GCGTATAGCACTTGAGAACAAGGCAGACCTTGGAGC...GGTGCTGGTCCTCCTCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS GCA 90 bp TTTTCCCTTCAGGCGTTGGACGAAGCCTCTGGTCCACTTCTTGGGTaGCATGTTGAGGGGAATGCCCGAGAGCTCACTGTTAATGTAGAG +
Preference number: 5 (lower is better)
Translates to: FSLQALDEASGPLLG*HVEGNARELTVNVE
Trigger: CTCTACATTAACAGTGAGCTCTCGGGCATTCCCCTCAACATGGCACCCAAGAAGTGGACCAGAGGCTTCGTCCAACGCCTGAAGGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CCA 90 bp TTTGCCACAGTACTGCTTGCCCTTGGTTCGCAGGTTGGCCCTCACTaGATTGTCATCGCTAGGCCTGAGGATGACACTGAAGATCTGCTT +
Preference number: 5 (lower is better)
Translates to: FATVLLALGSQVGPH*IVIARPEDDTEDLL
Trigger: AAGCAGATCTTCAGTGTCATCCTCAGGCCTAGCGATGACAATCCAGTGAGGGCCAACCTGCGAACCAAGGGCAAGCAGTACTGTGGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000472014.5
CDS CCA 90 bp CAGCCTCACCATGAACAGCCACATCACCGGGCTTCACACGGAGCTTaGATGTGCAGATGGAATATCTCACTGTCTCAGCGTTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: QPHHEQPHHRASHGA*MCRWNISLSQRSLP
Trigger: TGGAAGTGAACGCTGAGACAGTGAGATATTCCATCTGCACATCCAAGCTCCGTGTGAAGCCCGGTGATGTGGCTGTTCATGGTGAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS-3UTR CAA 90 bp CTGTTGCTCTTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATCTTAATTTTCTCATCCTaGCCAACCAGTATTGAAGCA +
Preference number: 5 (lower is better)
Translates to: LLLLSSSRRQALPAWSRILIFSS*PTSIEA
Trigger: TGCTTCAATACTGGTTGGCAAGGATGAGAAAATTAA...GATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGAGCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR CAA 90 bp GCTTGCCCGTGTTCAGGGCTTCGATGTACTCATCACATTTCTTGTAGCCGGCATGACCCTAGGGTTCCTTaGTCCATGCTGCCACTCATC +
Preference number: 5 (lower is better)
Translates to: ACPCSGLRCTHHISCSRHDPRVP*SMLPLI
Trigger: GATGAGTGGCAGCATGGACAAAGGAACCCTAGGGTC...ATGCCGGCTACAAGAAATGTGATGAGTACATCGAAGCCCTGAACACGGGCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR CAA 90 bp CCTTGGCGGTGCCATCTTTATTATTCCCAGCCACAAGTTATAGCCACAACCTCTGGCCTTCAGCAGTCCTaGGCCAGGTGTGACATCACC +
Preference number: 5 (lower is better)
Translates to: PWRCHLYYSQPQVIATTSGLQQS*ARCDIT
Trigger: GGTGATGTCACACCTGGCCAAGGACTGCTGAAGGCC...AGAGGTTGTGGCTATAACTTGTGGCTGGGAATAATAAAGATGGCACCGCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp TGGCTCATCGTCAGGTGTGAAGACACCATGGGGAGCCGATGGATGTATGCAGTGTTAATGAAGGAACCTTaGGAGCCGCACAGAGCCATG +
Preference number: 5 (lower is better)
Translates to: WLIVRCEDTMGSRWMYAVLMKEP*EPHRAM
Trigger: CATGGCTCTGTGCGGCTCCAAAGGTTCCTTCATTAA...CACTGCATACATCCATCGGCTCCCCATGGTGTCTTCACACCTGACGATGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp GTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAGGAGGACCAGCACCGTGTACTGGATTTCATaGATGATCGTTGTCCGGGCG +
Preference number: 5 (lower is better)
Translates to: VDVDSPSKAGSSRRRTSTVYWIS*MIVVRA
Trigger: CGCCCGGACAACGATCATCAATGAAATCCAGTACAC...GGTGCTGGTCCTCCTCCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CCA 90 bp GTACCCATCCTATGGTCGAGCACCCCATATAGCAAGGGGGCATGTTaGTTGTCCTGGCTGTACAGGTTCTTACTCACAACTTGGATGTGC +
Preference number: 5 (lower is better)
Translates to: VPILWSSTPYSKGAC*LSWLYRFLLTTWMC
Trigger: GCACATCCAAGTTGTGAGTAAGAACCTGTACAGCCAGGACAACCAACATGCCCCCTTGCTATATGGGGTGCTCGACCATAGGATGGGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp TTACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGTTGCCACAGTACTGCTaGCCCTTGGTTCGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: LPGNAVDVDSPSKAGSSRLPQYC*PLVRRL
Trigger: CAACCTGCGAACCAAGGGCAAGCAGTACTGTGGCAA...CCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp TTCCATTTAAAGTGTGCGTCACCCGCAGAAGACAACAGGTGCCGGAGTTCACTCAGGATCAGCTCGTTTTaGCTGAGAGCAGGCTCACTG +
Preference number: 5 (lower is better)
Translates to: FHLKCASPAEDNRCRSSLRISSF*LRAGSL
Trigger: CAGTGAGCCTGCTCTCAGCAAAAACGAGCTGATCCT...GAGTGAACTCCGGCACCTGTTGTCTTCTGCGGGTGACGCACACTTTAAATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp CCAGTGTCAGGTGATTATACCATGCTCCCTGACTCGGAGCTTTACTGCAGGCCAGGCTTCACACGGAGCTaGGATGTGCAGATGGAATAT +
Preference number: 5 (lower is better)
Translates to: PVSGDYTMLPDSELYCRPGFTRS*DVQMEY
Trigger: ATATTCCATCTGCACATCCAAGCTCCGTGTGAAGCC...TGGCCTGCAGTAAAGCTCCGAGTCAGGGAGCATGGTATAATCACCTGACACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CAA 90 bp CCAGTGTCAGGTGATTATACCATGCTCCCTGACTCGGAGCTTTACTGCAGGCCACCTTCCACCAGAAGCTaGTACTTCTCCTTTCCACTC +
Preference number: 5 (lower is better)
Translates to: PVSGDYTMLPDSELYCRPPSTRS*YFSFPL
Trigger: GAGTGGAAAGGAGAAGTACAAGCTTCTGGTGGAAGG...TGGCCTGCAGTAAAGCTCCGAGTCAGGGAGCATGGTATAATCACCTGACACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CAA 90 bp ACAGTGGGGAGCACAAACAGTAGGGTTTACCAGGCAATGCTGTTGATGTTGATACGGGGTTTCGTCATGTaGCCCAGGCTGCTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: TVGSTNSRVYQAMLLMLIRGFVM*PRLLSN
Trigger: GTTCGAGAGCAGCCTGGGCAACATGACGAAACCCCG...TATCAACATCAACAGCATTGCCTGGTAAACCCTACTGTTTGTGCTCCCCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS TCA 90 bp TTGGCAGATTCCAGCTTCCATGACTACCATCCTGCTTCTCTTTTCTaGGTGTGGACTATCCACCTTCATACAGGTCTCAGGGTTGGGGCC +
Preference number: 5 (lower is better)
Translates to: LADSSFHDYHPASLF*VWTIHLHTGLRVGA
Trigger: GGCCCCAACCCTGAGACCTGTATGAAGGTGGATAGTCCACACTCAGAAAAGAGAAGCAGGATGGTAGTCATGGAAGCTGGAATCTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS GCA 90 bp TTGTCCTGGCTGTACAGGTTCTTACTCACAACTTGGATGTGCGCCTaGTGGCGCATCTCCTCAGGTGACTTCATTCCAAAACAGATGTGG +
Preference number: 5 (lower is better)
Translates to: LSWLYRFLLTTWMCA*WRISSGDFIPKQMW
Trigger: CCACATCTGTTTTGGAATGAAGTCACCTGAGGAGATGCGCCAGCAGGCGCACATCCAAGTTGTGAGTAAGAACCTGTACAGCCAGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS GCA 90 bp AGGTTATCACCTTCCACCAGAAGCTTGTACTTCTCCTTTCCACTCTaGTCGTCAATGTGGATGACAGCTCTGGACACCTCTGGAATGCCC +
Preference number: 5 (lower is better)
Translates to: RLSPSTRSLYFSFPL*SSMWMTALDTSGMP
Trigger: GGGCATTCCAGAGGTGTCCAGAGCTGTCATCCACATTGACGAGCAGAGTGGAAAGGAGAAGTACAAGCTTCTGGTGGAAGGTGATAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS CCA 90 bp TCCTGGCTGTACAGGTTCTTACTCACAACTTGGATGTGCGCCTGCTaGCGCATCTCCTCAGGTGACTTCATTCCAAAACAGATGTGGCTT +
Preference number: 5 (lower is better)
Translates to: SWLYRFLLTTWMCAC*RISSGDFIPKQMWL
Trigger: AAGCCACATCTGTTTTGGAATGAAGTCACCTGAGGAGATGCGCCAGCAGGCGCACATCCAAGTTGTGAGTAAGAACCTGTACAGCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CCA 90 bp TGTAAGTTTCCTTTGCCTCCTTTCAAGGAGCTGTTATGCAAAAGCTaGGCTGTGCCACCCTACATACCCCCATCAGAACAAGGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: CKFPLPPFKELLCKS*AVPPYIPPSEQGPL
Trigger: CAGAGGCCCTTGTTCTGATGGGGGTATGTAGGGTGGCACAGCCCAGCTTTTGCATAACAGCTCCTTGAAAGGAGGCAAAGGAAACTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484760.1
CDS-3UTR CAA 90 bp TTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTGAGCTCTCATTGCCGGGACGCCTCCTaGGCACTCGGGAGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: FISSKQVQRLKCNPLSSHCRDAS*ALGRPD
Trigger: ATCTGGCCTCCCGAGTGCCAAGGAGGCGTCCCGGCA...ATGAGAGCTCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp TTACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGATGTGGCTTATTTTCTaGGCCACATCCGTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: LPGNAVDVDSPSKAGSSRMWLIF*ATSVSR
Trigger: CCGGGAGACGGATGTGGCCAAGAAAATAAGCCACAT...CCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp AGGGCAGATGATCAAAGTAGGGAGAATTTTAACACCAGTCATGGGACACAGTGGTCATCAATCCGGAGGTaGGGGTCGGGCGAGATGACT +
Preference number: 5 (lower is better)
Translates to: RADDQSRENFNTSHGTQWSSIRR*GSGEMT
Trigger: AGTCATCTCGCCCGACCCCAACCTCCGGATTGATGA...CCACTGTGTCCCATGACTGGTGTTAAAATTCTCCCTACTTTGATCATCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp AGGGCAGATGATCAAAGTAGGGAGAATTTTAACACCAGTCATGGGACACAGTGGAGCGAGGGCTGCCGATaGAACAGCACCACATCTCCA +
Preference number: 5 (lower is better)
Translates to: RADDQSRENFNTSHGTQWSEGCR*NSTTSP
Trigger: TGGAGATGTGGTGCTGTTCAATCGGCAGCCCTCGCT...CCACTGTGTCCCATGACTGGTGTTAAAATTCTCCCTACTTTGATCATCTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp GCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGAGTCAAGGTCAGGCGCCATAATGCTCAATTaGTGCAGCGAGGGCTGCCGA +
Preference number: 5 (lower is better)
Translates to: AQNSLYISWRQDKESRSGAIMLN*CSEGCR
Trigger: TCGGCAGCCCTCGCTGCACAAATTGAGCATTATGGC...GCCTGACCTTGACTCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp GCCCGTGTTCAGGGCTTCGATGTACTCATCACATTTCTTGTAGCCGGCATTCAGTTCAGCAACTCATACTaGGCCTTCAGCAGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: ARVQGFDVLITFLVAGIQFSNSY*AFSSPW
Trigger: CCAAGGACTGCTGAAGGCCAAGTATGAGTTGCTGAA...CTGAATGCCGGCTACAAGAAATGTGATGAGTACATCGAAGCCCTGAACACGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR CAA 90 bp TGGCTCATCGTCAGGTGTGAAGACACCATGGGGAGCCGATGGATGTATGCAGTGTGGCAGCTGGGAGCTTaGAGTGTTTTTCAAAATGAG +
Preference number: 5 (lower is better)
Translates to: WLIVRCEDTMGSRWMYAVWQLGA*SVFQNE
Trigger: CTCATTTTGAAAAACACTCAAAGCTCCCAGCTGCCA...CACTGCATACATCCATCGGCTCCCCATGGTGTCTTCACACCTGACGATGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp GCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGAGTCAAGGTCAGGCCTTCCCGGCCGGCCATaGTGTGGAAGAAAAACTCAG +
Preference number: 5 (lower is better)
Translates to: AQNSLYISWRQDKESRSGLPGRP*CGRKTQ
Trigger: CTGAGTTTTTCTTCCACACAATGGCCGGCCGGGAAG...GCCTGACCTTGACTCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp CTTCCTGAGAAGGTGATGAGACTCGGGTCTGGATACACTGGGCTCTCTTCATGTCGTTCCAGGGAGAGCTaGACGAGAATAAAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: LPEKVMRLGSGYTGLSSCRSRES*TRIKQS
Trigger: TGACTGCTTTATTCTCGTCAAGCTCTCCCTGGAACG...ACATGAAGAGAGCCCAGTGTATCCAGACCCGAGTCTCATCACCTTCTCAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS TCA 90 bp CAAGCTTCCAGCTTCCAGTGTCAACTCAGCTGTTTGCTCACTGAGTaGCATGGCCAATTCCTTTCCTGGTGCTTGGTTTCCTCACTGGTA +
Preference number: 5 (lower is better)
Translates to: QASSFQCQLSCLLTE*HGQFLSWCLVSSLV
Trigger: TACCAGTGAGGAAACCAAGCACCAGGAAAGGAATTGGCCATGTCACTCAGTGAGCAAACAGCTGAGTTGACACTGGAAGCTGGAAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484760.1
CDS GCA 90 bp GACCTGTTTTCAAAGCCGTCTGGCACTCGAGAGCCACTGATGGCCTaGTGTCCCACACAGGCAATCATCTGTGATATGTTAATGAAGGAA +
Preference number: 5 (lower is better)
Translates to: DLFSKPSGTREPLMA*CPTQAIICDMLMKE
Trigger: TTCCTTCATTAACATATCACAGATGATTGCCTGTGTGGGACAGCAGGCCATCAGTGGCTCTCGAGTGCCAGACGGCTTTGAAAACAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp CAGCCAGGCTGCTGCTGCAGCTTGCCCGTGTTCAGGGCTTCGATGTACTCATCATTTAGCTTCTTCTGTTaGAGGAAGATGAAGGTTCAT +
Preference number: 5 (lower is better)
Translates to: QPGCCCSLPVFRASMYSSFSFFC*RKMKVH
Trigger: ATGAACCTTCATCTTCCTCAAACAGAAGAAGCTAAA...TGATGAGTACATCGAAGCCCTGAACACGGGCAAGCTGCAGCAGCAGCCTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR CAA 90 bp GCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGAGTCAAGGTCAGGCCAGAAACTTTTCTACTaGGGTGGGGGTGATGCGGTC +
Preference number: 5 (lower is better)
Translates to: AQNSLYISWRQDKESRSGQKLFY*GGGDAV
Trigger: GACCGCATCACCCCCACCCAAGTAGAAAAGTTTCTG...GCCTGACCTTGACTCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp GTTCCATACTCCTTGGCAGATTCCAGCTTCCATGACTACCATCCTGCTTCTCTTGGAGTGCTGATGGCCTaGGAAGCGTTGATGATCTCT +
Preference number: 5 (lower is better)
Translates to: VPYSLADSSFHDYHPASLGVLMA*EALMIS
Trigger: AGAGATCATCAACGCTTCCAAGGCCATCAGCACTCC...AAGAGAAGCAGGATGGTAGTCATGGAAGCTGGAATCTGCCAAGGAGTATGGAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CAA 90 bp GTTCCATACTCCTTGGCAGATTCCAGCTTCCATGACTACCATCCTGCTTCTCTTTCCGCGTCGTCATCCTaGTCTAGCTGTGCTGTGATA +
Preference number: 5 (lower is better)
Translates to: VPYSLADSSFHDYHPASLSASSS*SSCAVI
Trigger: TATCACAGCACAGCTAGACAAGGATGACGACGCGGA...AAGAGAAGCAGGATGGTAGTCATGGAAGCTGGAATCTGCCAAGGAGTATGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CAA 90 bp TTACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGCCTTCCACCAGAAGCTaGTACTTCTCCTTTCCACTC +
Preference number: 5 (lower is better)
Translates to: LPGNAVDVDSPSKAGSSRPSTRS*YFSFPL
Trigger: GAGTGGAAAGGAGAAGTACAAGCTTCTGGTGGAAGG...CCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS TCA 90 bp CAAACAAGCTTCCAGCTTCCAGTGTCAACTCAGCTGTTTGCTCACTaGGTGACATGGCCAATTCCTTTCCTGGTGCTTGGTTTCCTCACT +
Preference number: 5 (lower is better)
Translates to: QTSFQLPVSTQLFAH*VTWPIPFLVLGFLT
Trigger: AGTGAGGAAACCAAGCACCAGGAAAGGAATTGGCCATGTCACTCAGTGAGCAAACAGCTGAGTTGACACTGGAAGCTGGAAGCTTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484760.1
CDS GCA 90 bp AGACTGGCAAACAAGCTTCCAGCTTCCAGTGTCAACTCAGCTGTTTaGTCACTGAGTGACATGGCCAATTCCTTTCCTGGTGCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: RLANKLPASSVNSAV*SLSDMANSFPGAWF
Trigger: AAACCAAGCACCAGGAAAGGAATTGGCCATGTCACTCAGTGAGCAAACAGCTGAGTTGACACTGGAAGCTGGAAGCTTGTTTGCCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484760.1
CDS CCA 90 bp AGGGCACACTGCAGCTGCAGGAAATCCCAGTCCTCCATGATCATCTaGGTCTTGGCTCCTGAGATCCGATGCTTTTTAATAACATCGTTT +
Preference number: 5 (lower is better)
Translates to: RAHCSCRKSQSSMII*VLAPEIRCFLITSF
Trigger: AAACGATGTTATTAAAAAGCATCGGATCTCAGGAGCCAAGACCCAGATGATCATGGAGGACTGGGATTTCCTGCAGCTGCAGTGTGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp TTCCATTTAAAGTGTGCGTCACCCGCAGAAGACAACAGGTGCCGGAGTTCACTCATGTGGCAGCAGGTTTaGCAGATCATCTGTAAGATG +
Preference number: 5 (lower is better)
Translates to: FHLKCASPAEDNRCRSSLMWQQV*QIICKM
Trigger: CATCTTACAGATGATCTGCAAAACCTGCTGCCACAT...GAGTGAACTCCGGCACCTGTTGTCTTCTGCGGGTGACGCACACTTTAAATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp TTACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAACCTCAGGGCCGTTTaGAACCAGTTTCCTCAAGAA +
Preference number: 5 (lower is better)
Translates to: LPGNAVDVDSPSKAGSSRNLRAV*NQFPQE
Trigger: TTCTTGAGGAAACTGGTTCAAAACGGCCCTGAGGTT...CCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp GTTCCATACTCCTTGGCAGATTCCAGCTTCCATGACTACCATCCTGCTTCTCTTGTGTACTGGATTTCATaGATGATCGTTGTCCGGGCG +
Preference number: 5 (lower is better)
Translates to: VPYSLADSSFHDYHPASLVYWIS*MIVVRA
Trigger: CGCCCGGACAACGATCATCAATGAAATCCAGTACAC...AAGAGAAGCAGGATGGTAGTCATGGAAGCTGGAATCTGCCAAGGAGTATGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CAA 90 bp CTTCCTGAGAAGGTGATGAGACTCGGGTCTGGATACACTGGGCTCTCTTCATGTTTAGGACGAGTTCATTaGGCTGGTGAGTTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: LPEKVMRLGSGYTGLSSCLGRVH*AGELFH
Trigger: ATGGAACAACTCACCAGCCAAATGAACTCGTCCTAA...ACATGAAGAGAGCCCAGTGTATCCAGACCCGAGTCTCATCACCTTCTCAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CAA 90 bp AGGAAGATCATGTTGTCTATGGGGAGAGATTGTGATTTACCTGTAACACCAGTGTGGGGTGTCACCATGTaGGCCAGGCTGATCTCGAAC +
Preference number: 5 (lower is better)
Translates to: RKIMLSMGRDCDLPVTPVWGVTM*ARLISN
Trigger: GTTCGAGATCAGCCTGGCCAACATGGTGACACCCCA...CACTGGTGTTACAGGTAAATCACAATCTCTCCCCATAGACAACATGATCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CAA 90 bp TGGCTCTTCCCAGGTTACATGAGAACTGGTGATCTCGGTGGGGTCTCAAGTAGAGTCAGATCATCTTCATaGGTGCCAGACTTCAAATCA +
Preference number: 5 (lower is better)
Translates to: WLFPGYMRTGDLGGVSSRVRSSS*VPDFKS
Trigger: TGATTTGAAGTCTGGCACCAATGAAGATGATCTGAC...TCTACTTGAGACCCCACCGAGATCACCAGTTCTCATGTAACCTGGGAAGAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CCA 90 bp AACTGGATAATATCGCCAGTAGAGCTTCGGACTGTCAGATCATACTaGGAGCAAAGATCTTCAAGAGATTTGACAAGCCTTCGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: NWIISPVELRTVRSY*EQRSSRDLTSLRSR
Trigger: CCTGGAGCGAAGGCTTGTCAAATCTCTTGAAGATCTTTGCTCCCAGTATGATCTGACAGTCCGAAGCTCTACTGGCGATATTATCCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472014.5
CDS-3UTR CAA 90 bp TTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTGAGCTCTCATCCTCTGGTCCACTTCTaGGGTGCCATGTTGAGGGGA +
Preference number: 5 (lower is better)
Translates to: FISSKQVQRLKCNPLSSHPLVHF*GAMLRG
Trigger: TCCCCTCAACATGGCACCCAAGAAGTGGACCAGAGG...ATGAGAGCTCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp GCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGAGTCAAGGTCAGGCTTATCTCTGGTTTTCTaGATCTTCTCAGAGACCCCC +
Preference number: 5 (lower is better)
Translates to: AQNSLYISWRQDKESRSGLSLVF*IFSETP
Trigger: GGGGGTCTCTGAGAAGATCAAGAAAACCAGAGATAA...GCCTGACCTTGACTCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp GGCCAAAAATCACTCGGTCACGAATTCCTAATCCACAATCACATCAGTAGGAAGGGCTTCACACGGAGCTaGGATGTGCAGATGGAATAT +
Preference number: 5 (lower is better)
Translates to: GQKSLGHEFLIHNHISRKGFTRS*DVQMEY
Trigger: ATATTCCATCTGCACATCCAAGCTCCGTGTGAAGCC...CTTCCTACTGATGTGATTGTGGATTAGGAATTCGTGACCGAGTGATTTTTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp ATCCAAGAACCAATGGCTACCCCGGGTACCTTAACAGCATCAACTCAGAACTTAGCAATGCTGTTGATGTaGATAGTCCTAGCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: IQEPMATPGTLTASTQNLAMLLM*IVLARL
Trigger: CAGCCTTGCTAGGACTATCAACATCAACAGCATTGC...TAAGTTCTGAGTTGATGCTGTTAAGGTACCCGGGGTAGCCATTGGTTCTTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS TCA 90 bp CGGTGGGAGGCGAACTTTAATTTTCTCATCCTTGCCAACCAGTATTaGAGCAATGATTTGGCAAGCCTTGGCTCGATCAAAGAAAGTGTC +
Preference number: 5 (lower is better)
Translates to: RWEANFNFLILANQY*SNDLASLGSIKESV
Trigger: GACACTTTCTTTGATCGAGCCAAGGCTTGCCAAATCATTGCTTCAATACTGGTTGGCAAGGATGAGAAAATTAAAGTTCGCCTCCCACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000473588.2
CDS CCA 90 bp AACTGGATAATATCGCCAGTAGAGCTTCGGACTGTCAGATCATACTaGGAGCAAAGATCTTCAAGAGATTTGACAAGCCTTCGCTGCATG +
Preference number: 5 (lower is better)
Translates to: NWIISPVELRTVRSY*EQRSSRDLTSLRCM
Trigger: CATGCAGCGAAGGCTTGTCAAATCTCTTGAAGATCTTTGCTCCCAGTATGATCTGACAGTCCGAAGCTCTACTGGCGATATTATCCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp TCACACGTATTTTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTTCTTGGGTGCCATGTaGAGGGGAATGCCCGAGAGC +
Preference number: 5 (lower is better)
Translates to: SHVFLFLPSRYRDSNVTLFLGAM*RGMPES
Trigger: GCTCTCGGGCATTCCCCTCAACATGGCACCCAAGAA...AAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAAAATACGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp TTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTGAGCTCTCATTTTTCCCTTCAGGCGTaGGACGAAGCCTCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: FISSKQVQRLKCNPLSSHFSLQA*DEASGP
Trigger: TGGACCAGAGGCTTCGTCCAACGCCTGAAGGGAAAA...ATGAGAGCTCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp CCCGTCCCAGGGAGCACAAAACTCTTTATACATCAGCTGGAGACAGGACAAGGATTTAGCTTCTTCTGTTaGAGGAAGATGAAGGTTCAT +
Preference number: 5 (lower is better)
Translates to: PVPGSTKLFIHQLETGQGFSFFC*RKMKVH
Trigger: ATGAACCTTCATCTTCCTCAAACAGAAGAAGCTAAA...TCCTTGTCCTGTCTCCAGCTGATGTATAAAGAGTTTTGTGCTCCCTGGGACGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp ACAGTGGGGAGCACAAACAGTAGGGTTTACCAGGCAATGCTGTTGATGTTGATAATGATTTGGCAAGCCTaGGCTCGATCAAAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: TVGSTNSRVYQAMLLMLIMIWQA*ARSKKV
Trigger: CACTTTCTTTGATCGAGCCAAGGCTTGCCAAATCAT...TATCAACATCAACAGCATTGCCTGGTAAACCCTACTGTTTGTGCTCCCCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp AAAATATTGTTCTTGGATCCTGACCCTAGGGTTCCTTTGTCCATGCTGCCACTCATGATTTGGCAAGCCTaGGCTCGATCAAAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: KILFLDPDPRVPLSMLPLMIWQA*ARSKKV
Trigger: CACTTTCTTTGATCGAGCCAAGGCTTGCCAAATCAT...GAGTGGCAGCATGGACAAAGGAACCCTAGGGTCAGGATCCAAGAACAATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473588.2
CDS-3UTR CAA 90 bp TTACCAGGCAATGCTGTTGATGTTGATAGTCCTAGCAAGGCTGGCAGTTCCAGGAAGACTGCTTTGATGTaGTCCAGAACCCTTTTAAAC +
Preference number: 5 (lower is better)
Translates to: LPGNAVDVDSPSKAGSSRKTALM*SRTLLN
Trigger: GTTTAAAAGGGTTCTGGACAACATCAAAGCAGTCTT...CCTGGAACTGCCAGCCTTGCTAGGACTATCAACATCAACAGCATTGCCTGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp GATTGTGATTTACCTGTAACACCAGTGTCAGGTGATTATACCATGCTCCCTGACATGGCCTTGGAAGCGTaGATGATCTCTTTAATCCGG +
Preference number: 5 (lower is better)
Translates to: DCDLPVTPVSGDYTMLPDMALEA*MISLIR
Trigger: CCGGATTAAAGAGATCATCAACGCTTCCAAGGCCAT...GTCAGGGAGCATGGTATAATCACCTGACACTGGTGTTACAGGTAAATCACAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS-3UTR CAA 90 bp AGGGCAGATGATCAAAGTAGGGAGAATTTTAACACCAGTCATGGGACACAGTGGCCCAGACGGCTCTATTaGCTTAAACCAGTTTTTCCA +
Preference number: 5 (lower is better)
Translates to: RADDQSRENFNTSHGTQWPRRLY*LKPVFP
Trigger: TGGAAAAACTGGTTTAAGCAAATAGAGCCGTCTGGG...CCACTGTGTCCCATGACTGGTGTTAAAATTCTCCCTACTTTGATCATCTGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp GATTGTGATTTACCTGTAACACCAGTGTCAGGTGATTATACCATGCTCCCTGACGTTGTTCCATACTCCTaGGCAGATTCCAGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: DCDLPVTPVSGDYTMLPDVVPYS*ADSSFH
Trigger: ATGGAAGCTGGAATCTGCCAAGGAGTATGGAACAAC...GTCAGGGAGCATGGTATAATCACCTGACACTGGTGTTACAGGTAAATCACAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616246.4
CDS TCA 90 bp ACTCTTGGATCATTAGTAACTCAACTGAGGACACACAACACAAGCTaGCCAGGAACATCTATGATCTGGGCTAACTGTGAGTCTCATAGG +
Preference number: 5 (lower is better)
Translates to: TLGSLVTQLRTHNTS*PGTSMIWANCESHR
Trigger: CCTATGAGACTCACAGTTAGCCCAGATCATAGATGTTCCTGGTCAGCTTGTGTTGTGTGTCCTCAGTTGAGTTACTAATGATCCAAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484760.1
CDS CCA 90 bp AAACCTTTTCATCTGCGTATGTCTCTGCTGAATGAAGTTTGCTCCTaGGTGAACCTCAGGGCCGTTTTGAACCAGTTTCCTCAAGAAATT +
Preference number: 5 (lower is better)
Translates to: KPFHLRMSLLNEVCS*VNLRAVLNQFPQEI
Trigger: AATTTCTTGAGGAAACTGGTTCAAAACGGCCCTGAGGTTCACCCAGGAGCAAACTTCATTCAGCAGAGACATACGCAGATGAAAAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372371.8
ENST00000473588.2
ENST00000484760.1
CDS-3UTR CAA 90 bp GTCTCAAGTAGAAGCCCTGAATTAGTGTTCATTAACAAACTTAATCCTTTGTCCAAGGGGGCATGTTGGTaGTCCTGGCTGTACAGGTTC +
Preference number: 5 (lower is better)
Translates to: VSSRSPELVFINKLNPLSKGACW*SWLYRF
Trigger: GAACCTGTACAGCCAGGACAACCAACATGCCCCCTT...GGACAAAGGATTAAGTTTGTTAATGAACACTAATTCAGGGCTTCTACTTGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp CCTTGGCGGTGCCATCTTTATTATTCCCAGCCACAAGTTATAGCCACAACCTCTGGATCCACCACTTTTTaGTTGGTCTTGTATTTCTCA +
Preference number: 5 (lower is better)
Translates to: PWRCHLYYSQPQVIATTSGSTTF*LVLYFS
Trigger: TGAGAAATACAAGACCAACAAAAAAGTGGTGGATCC...AGAGGTTGTGGCTATAACTTGTGGCTGGGAATAATAAAGATGGCACCGCCAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp ATCCAAGAACCAATGGCTACCCCGGGTACCTTAACAGCATCAACTCAGAACTTAACCATACTTGAGCTCTaGAGCCATCTTTTCTCGATT +
Preference number: 5 (lower is better)
Translates to: IQEPMATPGTLTASTQNLTILEL*SHLFSI
Trigger: AATCGAGAAAAGATGGCTCAAGAGCTCAAGTATGGT...TAAGTTCTGAGTTGATGCTGTTAAGGTACCCGGGGTAGCCATTGGTTCTTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CCA 90 bp CCTGTGCCCTTCCCAGCAGAGGCTCCACTTCTTTATTATGTTCAATaGCTGTTTCAAAAGACTGAAGGAAATTTGATACAATGGGATCCA +
Preference number: 5 (lower is better)
Translates to: PVPFPAEAPLLYYVQ*LFQKTEGNLIQWDP
Trigger: TGGATCCCATTGTATCAAATTTCCTTCAGTCTTTTGAAACAGCCATTGAACATAATAAAGAAGTGGAGCCTCTGCTGGGAAGGGCACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp GTCTCAAGTAGAAGCCCTGAATTAGTGTTCATTAACAAACTTAATCCTTTGTCCTTAGCCACAAAGCCTTaGGCAGCTGGGAGCTTTGAG +
Preference number: 5 (lower is better)
Translates to: VSSRSPELVFINKLNPLSLATKP*AAGSFE
Trigger: CTCAAAGCTCCCAGCTGCCAAAGGCTTTGTGGCTAA...GGACAAAGGATTAAGTTTGTTAATGAACACTAATTCAGGGCTTCTACTTGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp AGGGCAGATGATCAAAGTAGGGAGAATTTTAACACCAGTCATGGGACACAGTGGGGAAGAAAAACTCAGTaGGTGTCAAACCGGAATAAA +
Preference number: 5 (lower is better)
Translates to: RADDQSRENFNTSHGTQWGRKTQ*VSNRNK
Trigger: TTTATTCCGGTTTGACACCAACTGAGTTTTTCTTCC...CCACTGTGTCCCATGACTGGTGTTAAAATTCTCCCTACTTTGATCATCTGCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp TTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTGAGCTCTCATCACGGGAAGACTGCTTaGATGTTGTCCAGAACCCTT +
Preference number: 5 (lower is better)
Translates to: FISSKQVQRLKCNPLSSHHGKTA*MLSRTL
Trigger: AAGGGTTCTGGACAACATCAAAGCAGTCTTCCCGTG...ATGAGAGCTCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp GTCTCAAGTAGAAGCCCTGAATTAGTGTTCATTAACAAACTTAATCCTTTGTCCTCCGCGTCGTCATCCTaGTCTAGCTGTGCTGTGATA +
Preference number: 5 (lower is better)
Translates to: VSSRSPELVFINKLNPLSSASSS*SSCAVI
Trigger: TATCACAGCACAGCTAGACAAGGATGACGACGCGGA...GGACAAAGGATTAAGTTTGTTAATGAACACTAATTCAGGGCTTCTACTTGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CCA 90 bp ACTTTAATTTTCTCATCCTTGCCAACCAGTATTGAAGCAATGATTTaGCAAGCCTTGGCTCGATCAAAGAAAGTGTCCTTGAGAGTGAGG +
Preference number: 5 (lower is better)
Translates to: TLIFSSLPTSIEAMI*QALARSKKVSLRVR
Trigger: CCTCACTCTCAAGGACACTTTCTTTGATCGAGCCAAGGCTTGCCAAATCATTGCTTCAATACTGGTTGGCAAGGATGAGAAAATTAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000473588.2
CDS-3UTR CAA 90 bp ACAGTGGGGAGCACAAACAGTAGGGTTTACCAGGCAATGCTGTTGATGTTGATATTAATTTTCTCATCCTaGCCAACCAGTATTGAAGCA +
Preference number: 5 (lower is better)
Translates to: TVGSTNSRVYQAMLLMLILIFSS*PTSIEA
Trigger: TGCTTCAATACTGGTTGGCAAGGATGAGAAAATTAA...TATCAACATCAACAGCATTGCCTGGTAAACCCTACTGTTTGTGCTCCCCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp TCACACGTATTTTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTTCAGCAACTCATACTaGGCCTTCAGCAGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: SHVFLFLPSRYRDSNVTLFSNSY*AFSSPW
Trigger: CCAAGGACTGCTGAAGGCCAAGTATGAGTTGCTGAA...AAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAAAATACGTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp TCACACGTATTTTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTCGTTCCAGGGAGAGCTaGACGAGAATAAAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: SHVFLFLPSRYRDSNVTLRSRES*TRIKQS
Trigger: TGACTGCTTTATTCTCGTCAAGCTCTCCCTGGAACG...AAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAAAATACGTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp TTTATTTCTTCCAAGCAGGTACAGAGACTCAAATGTAACCCTTTGAGCTCTCATAGATCTTCAAGAGATTaGACAAGCCTTCGCTGCATG +
Preference number: 5 (lower is better)
Translates to: FISSKQVQRLKCNPLSSHRSSRD*TSLRCM
Trigger: CATGCAGCGAAGGCTTGTCAAATCTCTTGAAGATCT...ATGAGAGCTCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CCA 90 bp TTAAACAACTGTCTTGTGGAACACCATTTTGGAGAAGTTAACTCTTaGATCATTAGTAACTCAACTGAGGACACACAACACAAGCTGACC +
Preference number: 5 (lower is better)
Translates to: LNNCLVEHHFGEVNS*IISNSTEDTQHKLT
Trigger: GGTCAGCTTGTGTTGTGTGTCCTCAGTTGAGTTACTAATGATCCAAGAGTTAACTTCTCCAAAATGGTGTTCCACAAGACAGTTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484760.1
CDS-3UTR CAA 90 bp GTCTCAAGTAGAAGCCCTGAATTAGTGTTCATTAACAAACTTAATCCTTTGTCCTACCAGGCAATGCTGTaGATGTTGATAGTCCTAGCA +
Preference number: 5 (lower is better)
Translates to: VSSRSPELVFINKLNPLSYQAML*MLIVLA
Trigger: TGCTAGGACTATCAACATCAACAGCATTGCCTGGTA...GGACAAAGGATTAAGTTTGTTAATGAACACTAATTCAGGGCTTCTACTTGAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS-3UTR CAA 90 bp GTCTCAAGTAGAAGCCCTGAATTAGTGTTCATTAACAAACTTAATCCTTTGTCCGTTGTGCCGTTATCATaGATGCCATATTTATCTCTG +
Preference number: 5 (lower is better)
Translates to: VSSRSPELVFINKLNPLSVVPLS*MPYLSL
Trigger: CAGAGATAAATATGGCATCAATGATAACGGCACAAC...GGACAAAGGATTAAGTTTGTTAATGAACACTAATTCAGGGCTTCTACTTGAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS GCA 72 bp CGTCTCCCGGAACTGCTCCTTCACCATGATGACCGCTaGCGGGACGCCTCCTTGGCACTCGGGAGGCCAGAT +
Preference number: 6 (lower is better)
Translates to: RLPELLLHHDDR*RDASLALGRPD
Trigger: ATCTGGCCTCCCGAGTGCCAAGGAGGCGTCCCGGCAGCGGTCATCATGGTGAAGGAGCAGTTCCGGGAGACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CAA 90 bp GAACCTTTGGAGCCGCACAGAGCCATGGTGAGGGGGCTGTTGCTCTaGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCACGGATC +
Preference number: 6 (lower is better)
Translates to: EPLEPHRAMVRGLLL*SSSRRQALPAWSRI
Trigger: GATCCGTGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGAGCAACAGCCCCCTCACCATGGCTCTGTGCGGCTCCAAAGGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS GCA 72 bp CTTCGCTCCAGGGTCTCCTCAGCAGTGCAGCCAGGCTaGTGCTGCAGCTTGCCCGTGTTCAGGGCTTCGATG +
Preference number: 6 (lower is better)
Translates to: LRSRVSSAVQPG*CCSLPVFRASM
Trigger: CATCGAAGCCCTGAACACGGGCAAGCTGCAGCAGCAGCCTGGCTGCACTGCTGAGGAGACCCTGGAGCGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472014.5
CDS CAA 90 bp ATGAAGGAACCTTTGGAGCCGCACAGAGCCATGGTGAGGGGGCTGTaGCTCTTGTCCAGCTCCCGGAGGCAGGCACTGCCAGCGTGGTCA +
Preference number: 6 (lower is better)
Translates to: MKEPLEPHRAMVRGL*LLSSSRRQALPAWS
Trigger: TGACCACGCTGGCAGTGCCTGCCTCCGGGAGCTGGACAAGAGCAACAGCCCCCTCACCATGGCTCTGTGCGGCTCCAAAGGTTCCTTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS GCA 72 bp CTCCTTGGCACTCGGGAGGCCAGATTAGAGAAACGATaGCCCCAGCACCTCCTGGGGCTGCTTCTGGACTCG +
Preference number: 6 (lower is better)
Translates to: LLGTREARLEKR*PQHLLGLLLDS
Trigger: CGAGTCCAGAAGCAGCCCCAGGAGGTGCTGGGGGCATCGTTTCTCTAATCTGGCCTCCCGAGTGCCAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CCA 72 bp TCCTTCACCATGATGACCGCTGCCGGGACGCCTCCTTaGCACTCGGGAGGCCAGATTAGAGAAACGATGCCC +
Preference number: 6 (lower is better)
Translates to: SFTMMTAAGTPP*HSGGQIRETMP
Trigger: GGGCATCGTTTCTCTAATCTGGCCTCCCGAGTGCCAAGGAGGCGTCCCGGCAGCGGTCATCATGGTGAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS TCA 72 bp AGGTGGTTCGGGTGCCCTTCACACCGTGTGTGGCCATaGCTGCCCGCAGGTTATCACCTTCCACCAGAAGCT +
Preference number: 6 (lower is better)
Translates to: RWFGCPSHRVWP*LPAGYHLPPEA
Trigger: AGCTTCTGGTGGAAGGTGATAACCTGCGGGCAGTCATGGCCACACACGGTGTGAAGGGCACCCGAACCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS CAA 72 bp CCCTTCAGGCGTTGGACGAAGCCTCTGGTCCACTTCTaGGGTGCCATGTTGAGGGGAATGCCCGAGAGCTCA +
Preference number: 6 (lower is better)
Translates to: PFRRWTKPLVHF*GAMLRGMPESS
Trigger: TGAGCTCTCGGGCATTCCCCTCAACATGGCACCCAAGAAGTGGACCAGAGGCTTCGTCCAACGCCTGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS GCA 72 bp TGGCTTATTTTCTTGGCCACATCCGTCTCCCGGAACTaGTCCTTCACCATGATGACCGCTGCCGGGACGCCT +
Preference number: 6 (lower is better)
Translates to: WLIFLATSVSRN*SFTMMTAAGTP
Trigger: AGGCGTCCCGGCAGCGGTCATCATGGTGAAGGAGCAGTTCCGGGAGACGGATGTGGCCAAGAAAATAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS GCA 72 bp CAGGCGTTGGACGAAGCCTCTGGTCCACTTCTTGGGTaGCATGTTGAGGGGAATGCCCGAGAGCTCACTGTT +
Preference number: 6 (lower is better)
Translates to: QALDEASGPLLG*HVEGNARELTV
Trigger: AACAGTGAGCTCTCGGGCATTCCCCTCAACATGGCACCCAAGAAGTGGACCAGAGGCTTCGTCCAACGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS GCA 72 bp GGTTCGGGTGCCCTTCACACCGTGTGTGGCCATGACTaGCCGCAGGTTATCACCTTCCACCAGAAGCTTGTA +
Preference number: 6 (lower is better)
Translates to: GSGALHTVCGHD*PQVITFHQKLV
Trigger: TACAAGCTTCTGGTGGAAGGTGATAACCTGCGGGCAGTCATGGCCACACACGGTGTGAAGGGCACCCGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS CCA 72 bp CTGCTCGTCAATGTGGATGACAGCTCTGGACACCTCTaGAATGCCCTGCACCACCACCTTGGGGAGATCCTC +
Preference number: 6 (lower is better)
Translates to: LLVNVDDSSGHL*NALHHHLGEIL
Trigger: GAGGATCTCCCCAAGGTGGTGGTGCAGGGCATTCCAGAGGTGTCCAGAGCTGTCATCCACATTGACGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS CAA 72 bp CCTTTGCCACAGTACTGCTTGCCCTTGGTTCGCAGGTaGGCCCTCACTGGATTGTCATCGCTAGGCCTGAGG +
Preference number: 6 (lower is better)
Translates to: PLPQYCLPLVRR*ALTGLSSLGLR
Trigger: CCTCAGGCCTAGCGATGACAATCCAGTGAGGGCCAACCTGCGAACCAAGGGCAAGCAGTACTGTGGCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000472014.5
CDS TCA 72 bp GGCCTCTTGGGAGGGTTCGGGTCCCTGTCAGCCTTGTaGAGCAGCTTGAAGAGCCCGGTTCCAATGTTCATT +
Preference number: 6 (lower is better)
Translates to: GLLGGFGSLSAL*SSLKSPVPMFI
Trigger: AATGAACATTGGAACCGGGCTCTTCAAGCTGCTTCACAAGGCTGACAGGGACCCGAACCCTCCCAAGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS GCA 72 bp TGGCTCACCAATGCTCTGGGCACACAGAGCACCCACTaGAGAACCTGGCTCCATCTGTGCCCTCATGTACTT +
Preference number: 6 (lower is better)
Translates to: WLTNALGTQSTH*RTWLHLCPHVL
Trigger: AAGTACATGAGGGCACAGATGGAGCCAGGTTCTGCAGTGGGTGCTCTGTGTGCCCAGAGCATTGGTGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CAA 90 bp CCCTGTTTTCCCTTCAGGCGTTGGACGAAGCCTCTGGTCCACTTCTaGGGTGCCATGTTGAGGGGAATGCCCGAGAGCTCACTGTTAATG +
Preference number: 6 (lower is better)
Translates to: PCFPFRRWTKPLVHF*GAMLRGMPESSLLM
Trigger: CATTAACAGTGAGCTCTCGGGCATTCCCCTCAACATGGCACCCAAGAAGTGGACCAGAGGCTTCGTCCAACGCCTGAAGGGAAAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CAA 90 bp CCACAGTACTGCTTGCCCTTGGTTCGCAGGTTGGCCCTCACTGGATaGTCATCGCTAGGCCTGAGGATGACACTGAAGATCTGCTTTCCC +
Preference number: 6 (lower is better)
Translates to: PQYCLPLVRRLALTG*SSLGLRMTLKICFP
Trigger: GGGAAAGCAGATCTTCAGTGTCATCCTCAGGCCTAGCGATGACAATCCAGTGAGGGCCAACCTGCGAACCAAGGGCAAGCAGTACTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000472014.5
CDS CAA 90 bp AGATCTTCCCCTTTGCCACAGTACTGCTTGCCCTTGGTTCGCAGGTaGGCCCTCACTGGATTGTCATCGCTAGGCCTGAGGATGACACTG +
Preference number: 6 (lower is better)
Translates to: RSSPLPQYCLPLVRR*ALTGLSSLGLRMTL
Trigger: CAGTGTCATCCTCAGGCCTAGCGATGACAATCCAGTGAGGGCCAACCTGCGAACCAAGGGCAAGCAGTACTGTGGCAAAGGGGAAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000472014.5
CDS CAA 90 bp TCATTGGCACAGAGATCTTCCCCTTTGCCACAGTACTGCTTGCCCTaGGTTCGCAGGTTGGCCCTCACTGGATTGTCATCGCTAGGCCTG +
Preference number: 6 (lower is better)
Translates to: SLAQRSSPLPQYCLP*VRRLALTGLSSLGL
Trigger: CAGGCCTAGCGATGACAATCCAGTGAGGGCCAACCTGCGAACCAAGGGCAAGCAGTACTGTGGCAAAGGGGAAGATCTCTGTGCCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000472014.5
CDS TCA 72 bp GAGGGTTCGGGTCCCTGTCAGCCTTGTGAAGCAGCTTaGAGAGCCCGGTTCCAATGTTCATTGGGATTCCCA +
Preference number: 6 (lower is better)
Translates to: EGSGPCQPCEAA*RARFQCSLGFP
Trigger: TGGGAATCCCAATGAACATTGGAACCGGGCTCTTCAAGCTGCTTCACAAGGCTGACAGGGACCCGAACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS GCA 72 bp TGGCACAGAGATCTTCCCCTTTGCCACAGTACTGCTTaGCCTTGGTTCGCAGGTTGGCCCTCACTGGATTGT +
Preference number: 6 (lower is better)
Translates to: WHRDLPLCHSTA*PWFAGWPSLDC
Trigger: ACAATCCAGTGAGGGCCAACCTGCGAACCAAGGGCAAGCAGTACTGTGGCAAAGGGGAAGATCTCTGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000472014.5
CDS GCA 72 bp TCATTGGCACAGAGATCTTCCCCTTTGCCACAGTACTaGTTGCCCTTGGTTCGCAGGTTGGCCCTCACTGGA +
Preference number: 6 (lower is better)
Translates to: SLAQRSSPLPQY*LPLVRRLALTG
Trigger: TCCAGTGAGGGCCAACCTGCGAACCAAGGGCAAGCAGTACTGTGGCAAAGGGGAAGATCTCTGTGCCAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000472014.5
CDS CCA 72 bp TGGTTGTCCTGGCTGTACAGGTTCTTACTCACAACTTaGATGTGCGCCTGCTGGCGCATCTCCTCAGGTGAC +
Preference number: 6 (lower is better)
Translates to: WLSWLYRFLLTT*MCACWRISSGD
Trigger: GTCACCTGAGGAGATGCGCCAGCAGGCGCACATCCAAGTTGTGAGTAAGAACCTGTACAGCCAGGACAACCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CCA 72 bp GTACTGCTTGCCCTTGGTTCGCAGGTTGGCCCTCACTaGATTGTCATCGCTAGGCCTGAGGATGACACTGAA +
Preference number: 6 (lower is better)
Translates to: VLLALGSQVGPH*IVIARPEDDTE
Trigger: TTCAGTGTCATCCTCAGGCCTAGCGATGACAATCCAGTGAGGGCCAACCTGCGAACCAAGGGCAAGCAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000472014.5
CDS CCA 72 bp AGAGATCTTCCCCTTTGCCACAGTACTGCTTGCCCTTaGTTCGCAGGTTGGCCCTCACTGGATTGTCATCGC +
Preference number: 6 (lower is better)
Translates to: RDLPLCHSTACP*FAGWPSLDCHR
Trigger: GCGATGACAATCCAGTGAGGGCCAACCTGCGAACCAAGGGCAAGCAGTACTGTGGCAAAGGGGAAGATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000472014.5
CDS CCA 72 bp CGATGCCCAGAGTTTTCTCCACCTCATAGGTGTTATTaGAGGTGGTTCGGGTGCCCTTCACACCGTGTGTGG +
Preference number: 6 (lower is better)
Translates to: RCPEFSPPHRCY*RWFGCPSHRVW
Trigger: CCACACACGGTGTGAAGGGCACCCGAACCACCTCCAATAACACCTATGAGGTGGAGAAAACTCTGGGCATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS CCA 72 bp CTGTCGATGCTCATGCCGTGGTTCACCATGGTGTACTaGATTTCATTGATGATCGTTGTCCGGGCGGCCTCG +
Preference number: 6 (lower is better)
Translates to: LSMLMPWFTMVY*ISLMIVVRAAS
Trigger: CGAGGCCGCCCGGACAACGATCATCAATGAAATCCAGTACACCATGGTGAACCACGGCATGAGCATCGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS CAA 72 bp TGCTTGCCCTTGGTTCGCAGGTTGGCCCTCACTGGATaGTCATCGCTAGGCCTGAGGATGACACTGAAGATC +
Preference number: 6 (lower is better)
Translates to: CLPLVRRLALTG*SSLGLRMTLKI
Trigger: GATCTTCAGTGTCATCCTCAGGCCTAGCGATGACAATCCAGTGAGGGCCAACCTGCGAACCAAGGGCAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000472014.5
CDS CAA 72 bp CAGAGATCTTCCCCTTTGCCACAGTACTGCTTGCCCTaGGTTCGCAGGTTGGCCCTCACTGGATTGTCATCG +
Preference number: 6 (lower is better)
Translates to: QRSSPLPQYCLP*VRRLALTGLSS
Trigger: CGATGACAATCCAGTGAGGGCCAACCTGCGAACCAAGGGCAAGCAGTACTGTGGCAAAGGGGAAGATCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000472014.5
CDS CAA 72 bp TTGGCACAGAGATCTTCCCCTTTGCCACAGTACTGCTaGCCCTTGGTTCGCAGGTTGGCCCTCACTGGATTG +
Preference number: 6 (lower is better)
Translates to: LAQRSSPLPQYC*PLVRRLALTGL
Trigger: CAATCCAGTGAGGGCCAACCTGCGAACCAAGGGCAAGCAGTACTGTGGCAAAGGGGAAGATCTCTGTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000472014.5
CDS CAA 72 bp CTCATGCCGTGGTTCACCATGGTGTACTGGATTTCATaGATGATCGTTGTCCGGGCGGCCTCGATGCCCAGA +
Preference number: 6 (lower is better)
Translates to: LMPWFTMVYWIS*MIVVRAASMPR
Trigger: TCTGGGCATCGAGGCCGCCCGGACAACGATCATCAATGAAATCCAGTACACCATGGTGAACCACGGCATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS CAA 90 bp CCCATCCTATGGTCGAGCACCCCATATAGCAAGGGGGCATGTTGGTaGTCCTGGCTGTACAGGTTCTTACTCACAACTTGGATGTGCGCC +
Preference number: 6 (lower is better)
Translates to: PILWSSTPYSKGACW*SWLYRFLLTTWMCA
Trigger: GGCGCACATCCAAGTTGTGAGTAAGAACCTGTACAGCCAGGACAACCAACATGCCCCCTTGCTATATGGGGTGCTCGACCATAGGATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CAA 90 bp CTGTCGATGCTCATGCCGTGGTTCACCATGGTGTACTGGATTTCATaGATGATCGTTGTCCGGGCGGCCTCGATGCCCAGAGTTTTCTCC +
Preference number: 6 (lower is better)
Translates to: LSMLMPWFTMVYWIS*MIVVRAASMPRVFS
Trigger: GGAGAAAACTCTGGGCATCGAGGCCGCCCGGACAACGATCATCAATGAAATCCAGTACACCATGGTGAACCACGGCATGAGCATCGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS TCA 72 bp CGTAGTACATGGAGCTCTTGCTGTTCTCTCTGGGGGTaGCACACACCACAGCCTCACCATGAACAGCCACAT +
Preference number: 6 (lower is better)
Translates to: RSTWSSCCSLWG*HTPQPHHEQPH
Trigger: ATGTGGCTGTTCATGGTGAGGCTGTGGTGTGTGTCACCCCCAGAGAGAACAGCAAGAGCTCCATGTACTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS GCA 72 bp CTCCTTTCAAGGAGCTGTTATGCAAAAGCTGGGCTGTaGCACCCTACATACCCCCATCAGAACAAGGGCCTC +
Preference number: 6 (lower is better)
Translates to: LLSRSCYAKAGL*HPTYPHQNKGL
Trigger: GAGGCCCTTGTTCTGATGGGGGTATGTAGGGTGGCACAGCCCAGCTTTTGCATAACAGCTCCTTGAAAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484760.1
CDS CCA 72 bp TGTGGAATTCATTTGTGTCGAAGATCAGGGGCCTCTTaGGAGGGTTCGGGTCCCTGTCAGCCTTGTGAAGCA +
Preference number: 6 (lower is better)
Translates to: CGIHLCRRSGAS*EGSGPCQPCEA
Trigger: TGCTTCACAAGGCTGACAGGGACCCGAACCCTCCCAAGAGGCCCCTGATCTTCGACACAAATGAATTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CCA 72 bp TCAGCTGGAGACAGGACAAGGAGTCAAGGTCAGGCATaGTCCCCTCTTTCTTTGGACTATGTGACAAGGGGG +
Preference number: 6 (lower is better)
Translates to: SAGDRTRSQGQA*SPLSLDYVTRG
Trigger: CCCCCTTGTCACATAGTCCAAAGAAAGAGGGGACCATGCCTGACCTTGACTCCTTGTCCTGTCTCCAGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CAA 72 bp GTACTTGTCCCTACAGGTCTCCAGAAACTTTTCTACTaGGGTGGGGGTGATGCGGTCCAGCTGGTACAGCAC +
Preference number: 6 (lower is better)
Translates to: VLVPTGLQKLFY*GGGDAVQLVQH
Trigger: GTGCTGTACCAGCTGGACCGCATCACCCCCACCCAAGTAGAAAAGTTTCTGGAGACCTGTAGGGACAAGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CAA 72 bp GCTGTGATAATTGGAGTGCTGATGGCCTTGGAAGCGTaGATGATCTCTTTAATCCGGGGCACGCCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: AVIIGVLMALEA*MISLIRGTPRV
Trigger: CACCCTGGGCGTGCCCCGGATTAAAGAGATCATCAACGCTTCCAAGGCCATCAGCACTCCAATTATCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS GCA 72 bp TCAAAGCCGTCTGGCACTCGAGAGCCACTGATGGCCTaGTGTCCCACACAGGCAATCATCTGTGATATGTTA +
Preference number: 6 (lower is better)
Translates to: SKPSGTREPLMA*CPTQAIICDML
Trigger: TAACATATCACAGATGATTGCCTGTGTGGGACAGCAGGCCATCAGTGGCTCTCGAGTGCCAGACGGCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS GCA 72 bp CAGCCACATCACCGGGCTTCACACGGAGCTTGGATGTaGAGATGGAATATCTCACTGTCTCAGCGTTCACTT +
Preference number: 6 (lower is better)
Translates to: QPHHRASHGAWM*RWNISLSQRSL
Trigger: AAGTGAACGCTGAGACAGTGAGATATTCCATCTGCACATCCAAGCTCCGTGTGAAGCCCGGTGATGTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS CCA 72 bp TACTTGTCCCTACAGGTCTCCAGAAACTTTTCTACTTaGGTGGGGGTGATGCGGTCCAGCTGGTACAGCACA +
Preference number: 6 (lower is better)
Translates to: YLSLQVSRNFST*VGVMRSSWYST
Trigger: TGTGCTGTACCAGCTGGACCGCATCACCCCCACCCAAGTAGAAAAGTTTCTGGAGACCTGTAGGGACAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CCA 72 bp CATGAACAGCCACATCACCGGGCTTCACACGGAGCTTaGATGTGCAGATGGAATATCTCACTGTCTCAGCGT +
Preference number: 6 (lower is better)
Translates to: HEQPHHRASHGA*MCRWNISLSQR
Trigger: ACGCTGAGACAGTGAGATATTCCATCTGCACATCCAAGCTCCGTGTGAAGCCCGGTGATGTGGCTGTTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS CCA 72 bp AGCTTGTACTTCTCCTTTCCACTCTGCTCGTCAATGTaGATGACAGCTCTGGACACCTCTGGAATGCCCTGC +
Preference number: 6 (lower is better)
Translates to: SLYFSFPLCSSM*MTALDTSGMPC
Trigger: GCAGGGCATTCCAGAGGTGTCCAGAGCTGTCATCCACATTGACGAGCAGAGTGGAAAGGAGAAGTACAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS CAA 72 bp TGGTCGAGCACCCCATATAGCAAGGGGGCATGTTGGTaGTCCTGGCTGTACAGGTTCTTACTCACAACTTGG +
Preference number: 6 (lower is better)
Translates to: WSSTPYSKGACW*SWLYRFLLTTW
Trigger: CCAAGTTGTGAGTAAGAACCTGTACAGCCAGGACAACCAACATGCCCCCTTGCTATATGGGGTGCTCGACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CAA 72 bp GCCATAATGCTCAATTTGTGCAGCGAGGGCTGCCGATaGAACAGCACCACATCTCCATCGATGAGGTGTCTC +
Preference number: 6 (lower is better)
Translates to: AIMLNLCSEGCR*NSTTSPSMRCL
Trigger: GAGACACCTCATCGATGGAGATGTGGTGCTGTTCAATCGGCAGCCCTCGCTGCACAAATTGAGCATTATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372371.8
ENST00000473588.2
ENST00000484760.1
CDS CAA 72 bp TTCATGATGGACTCTGTGGTCAGGATCAGCTCGTTTTaGCTGAGAGCAGGCTCACTGGGACACGGGAAGACT +
Preference number: 6 (lower is better)
Translates to: FMMDSVVRISSF*LRAGSLGHGKT
Trigger: AGTCTTCCCGTGTCCCAGTGAGCCTGCTCTCAGCAAAAACGAGCTGATCCTGACCACAGAGTCCATCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CAA 90 bp TCACTCTTCTTCATGATGGACTCTGTGGTCAGGATCAGCTCGTTTTaGCTGAGAGCAGGCTCACTGGGACACGGGAAGACTGCTTTGATG +
Preference number: 6 (lower is better)
Translates to: SLFFMMDSVVRISSF*LRAGSLGHGKTALM
Trigger: CATCAAAGCAGTCTTCCCGTGTCCCAGTGAGCCTGCTCTCAGCAAAAACGAGCTGATCCTGACCACAGAGTCCATCATGAAGAAGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS GCA 72 bp CCTTCCACCAGAAGCTTGTACTTCTCCTTTCCACTCTaGTCGTCAATGTGGATGACAGCTCTGGACACCTCT +
Preference number: 6 (lower is better)
Translates to: PSTRSLYFSFPL*SSMWMTALDTS
Trigger: AGAGGTGTCCAGAGCTGTCATCCACATTGACGAGCAGAGTGGAAAGGAGAAGTACAAGCTTCTGGTGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS CCA 72 bp AGCACCCCATATAGCAAGGGGGCATGTTGGTTGTCCTaGCTGTACAGGTTCTTACTCACAACTTGGATGTGC +
Preference number: 6 (lower is better)
Translates to: STPYSKGACWLS*LYRFLLTTWMC
Trigger: GCACATCCAAGTTGTGAGTAAGAACCTGTACAGCCAGGACAACCAACATGCCCCCTTGCTATATGGGGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CCA 72 bp CTATGGTCGAGCACCCCATATAGCAAGGGGGCATGTTaGTTGTCCTGGCTGTACAGGTTCTTACTCACAACT +
Preference number: 6 (lower is better)
Translates to: LWSSTPYSKGAC*LSWLYRFLLTT
Trigger: AGTTGTGAGTAAGAACCTGTACAGCCAGGACAACCAACATGCCCCCTTGCTATATGGGGTGCTCGACCATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CCA 72 bp AGCAGCATCACGTGCCTCCTGTCGATGCTCATGCCGTaGTTCACCATGGTGTACTGGATTTCATTGATGATC +
Preference number: 6 (lower is better)
Translates to: SSITCLLSMLMP*FTMVYWISLMI
Trigger: GATCATCAATGAAATCCAGTACACCATGGTGAACCACGGCATGAGCATCGACAGGAGGCACGTGATGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS CCA 72 bp CCTTTGCCTCCTTTCAAGGAGCTGTTATGCAAAAGCTaGGCTGTGCCACCCTACATACCCCCATCAGAACAA +
Preference number: 6 (lower is better)
Translates to: PLPPFKELLCKS*AVPPYIPPSEQ
Trigger: TTGTTCTGATGGGGGTATGTAGGGTGGCACAGCCCAGCTTTTGCATAACAGCTCCTTGAAAGGAGGCAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484760.1
CDS CAA 72 bp ATTTCCTCTAAATCGACCCTGTTTTCCCTTCAGGCGTaGGACGAAGCCTCTGGTCCACTTCTTGGGTGCCAT +
Preference number: 6 (lower is better)
Translates to: ISSKSTLFSLQA*DEASGPLLGCH
Trigger: ATGGCACCCAAGAAGTGGACCAGAGGCTTCGTCCAACGCCTGAAGGGAAAACAGGGTCGATTTAGAGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CAA 72 bp ATGACTGCCCGCAGGTTATCACCTTCCACCAGAAGCTaGTACTTCTCCTTTCCACTCTGCTCGTCAATGTGG +
Preference number: 6 (lower is better)
Translates to: MTARRLSPSTRS*YFSFPLCSSMW
Trigger: CCACATTGACGAGCAGAGTGGAAAGGAGAAGTACAAGCTTCTGGTGGAAGGTGATAACCTGCGGGCAGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000616246.4
CDS CAA 90 bp GGAGACAGGACAAGGAGTCAAGGTCAGGCATGGTCCCCTCTTTCTTaGGACTATGTGACAAGGGGGATGTGGAATTCATTTGTGTCGAAG +
Preference number: 6 (lower is better)
Translates to: GDRTRSQGQAWSPLS*DYVTRGMWNSFVSK
Trigger: CTTCGACACAAATGAATTCCACATCCCCCTTGTCACATAGTCCAAAGAAAGAGGGGACCATGCCTGACCTTGACTCCTTGTCCTGTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS TCA 72 bp AGCTTCCAGTGTCAACTCAGCTGTTTGCTCACTGAGTaGCATGGCCAATTCCTTTCCTGGTGCTTGGTTTCC +
Preference number: 6 (lower is better)
Translates to: SFQCQLSCLLTE*HGQFLSWCLVS
Trigger: GGAAACCAAGCACCAGGAAAGGAATTGGCCATGTCACTCAGTGAGCAAACAGCTGAGTTGACACTGGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484760.1
CDS TCA 72 bp TTCCAGCTTCCAGTGTCAACTCAGCTGTTTGCTCACTaGGTGACATGGCCAATTCCTTTCCTGGTGCTTGGT +
Preference number: 6 (lower is better)
Translates to: FQLPVSTQLFAH*VTWPIPFLVLG
Trigger: ACCAAGCACCAGGAAAGGAATTGGCCATGTCACTCAGTGAGCAAACAGCTGAGTTGACACTGGAAGCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484760.1
CDS GCA 72 bp CTGTACAGGTTCTTACTCACAACTTGGATGTGCGCCTaGTGGCGCATCTCCTCAGGTGACTTCATTCCAAAA +
Preference number: 6 (lower is better)
Translates to: LYRFLLTTWMCA*WRISSGDFIPK
Trigger: TTTTGGAATGAAGTCACCTGAGGAGATGCGCCAGCAGGCGCACATCCAAGTTGTGAGTAAGAACCTGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CCA 72 bp TACAGGTTCTTACTCACAACTTGGATGTGCGCCTGCTaGCGCATCTCCTCAGGTGACTTCATTCCAAAACAG +
Preference number: 6 (lower is better)
Translates to: YRFLLTTWMCAC*RISSGDFIPKQ
Trigger: CTGTTTTGGAATGAAGTCACCTGAGGAGATGCGCCAGCAGGCGCACATCCAAGTTGTGAGTAAGAACCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CCA 72 bp CATCTGCGTATGTCTCTGCTGAATGAAGTTTGCTCCTaGGTGAACCTCAGGGCCGTTTTGAACCAGTTTCCT +
Preference number: 6 (lower is better)
Translates to: HLRMSLLNEVCS*VNLRAVLNQFP
Trigger: AGGAAACTGGTTCAAAACGGCCCTGAGGTTCACCCAGGAGCAAACTTCATTCAGCAGAGACATACGCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372371.8
ENST00000473588.2
ENST00000484760.1
CDS GCA 72 bp AACAAGCTTCCAGCTTCCAGTGTCAACTCAGCTGTTTaGTCACTGAGTGACATGGCCAATTCCTTTCCTGGT +
Preference number: 6 (lower is better)
Translates to: NKLPASSVNSAV*SLSDMANSFPG
Trigger: ACCAGGAAAGGAATTGGCCATGTCACTCAGTGAGCAAACAGCTGAGTTGACACTGGAAGCTGGAAGCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484760.1
CDS TCA 72 bp AGTCCAGAAACTGCTTCTTCTCCTCTTGGGACAGCATaGTGTGGCAGCAGGTTTTGCAGATCATCTGTAAGA +
Preference number: 6 (lower is better)
Translates to: SPETASSPLGTA*CGSRFCRSSVR
Trigger: TCTTACAGATGATCTGCAAAACCTGCTGCCACATCATGCTGTCCCAAGAGGAGAAGAAGCAGTTTCTGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS TCA 72 bp AAGGTCAGGCATGGTCCCCTCTTTCTTTGGACTATGTaGCAAGGGGGATGTGGAATTCATTTGTGTCGAAGA +
Preference number: 6 (lower is better)
Translates to: KVRHGPLFLWTM*QGGCGIHLCRR
Trigger: TCTTCGACACAAATGAATTCCACATCCCCCTTGTCACATAGTCCAAAGAAAGAGGGGACCATGCCTGACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CCA 72 bp CAGCACCACAAGCCCTGGTCTGCATTGAATGTGTTCTaGAACCTCTTAAACAACTGTCTTGTGGAACACCAT +
Preference number: 6 (lower is better)
Translates to: QHHKPWSALNVF*NLLNNCLVEHH
Trigger: ATGGTGTTCCACAAGACAGTTGTTTAAGAGGTTCCAGAACACATTCAATGCAGACCAGGGCTTGTGGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484760.1
CDS CAA 72 bp TCCAGTCTCAGAAGCCTAATCCGTTCCAGGGAGAGCTaGACGAGAATAAAGCAGTCATCAGGAAGAAACACT +
Preference number: 6 (lower is better)
Translates to: SSLRSLIRSRES*TRIKQSSGRNT
Trigger: AGTGTTTCTTCCTGATGACTGCTTTATTCTCGTCAAGCTCTCCCTGGAACGGATTAGGCTTCTGAGACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CAA 90 bp TCTTTGGCGTTGTTAGTTGTGGTGGTGTTTTCATGTAAGTTTCCTTaGCCTCCTTTCAAGGAGCTGTTATGCAAAAGCTGGGCTGTGCCA +
Preference number: 6 (lower is better)
Translates to: SLALLVVVVFSCKFP*PPFKELLCKSWAVP
Trigger: TGGCACAGCCCAGCTTTTGCATAACAGCTCCTTGAAAGGAGGCAAAGGAAACTTACATGAAAACACCACCACAACTAACAACGCCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484760.1
CDS TCA 72 bp TCAGATCATACTGGGAGCAAAGATCTTCAAGAGATTTaGCAAGCCTTCGCTGCATGTATCCCGTTTCAGCTG +
Preference number: 6 (lower is better)
Translates to: SDHTGSKDLQEI*QAFAACIPFQL
Trigger: CAGCTGAAACGGGATACATGCAGCGAAGGCTTGTCAAATCTCTTGAAGATCTTTGCTCCCAGTATGATCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS TCA 72 bp CTTGGTTTCCTCACTGGTAAAACGGGTAGGCTAGACTaGTCTATAGGAACCTTCTGTGATCCTAGAAACAGG +
Preference number: 6 (lower is better)
Translates to: LGFLTGKTGRLD*SIGTFCDPRNR
Trigger: CCTGTTTCTAGGATCACAGAAGGTTCCTATAGATCAGTCTAGCCTACCCGTTTTACCAGTGAGGAAACCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484760.1
CDS CCA 72 bp TTCCCGGCCGGCCATTGTGTGGAAGAAAAACTCAGTTaGTGTCAAACCGGAATAAAAGCTATTAGCCACAAA +
Preference number: 6 (lower is better)
Translates to: FPAGHCVEEKLS*CQTGIKAISHK
Trigger: TTTGTGGCTAATAGCTTTTATTCCGGTTTGACACCAACTGAGTTTTTCTTCCACACAATGGCCGGCCGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CAA 72 bp AAAATATTGTTCTTGGATCCTGACCCTAGGGTTCCTTaGTCCATGCTGCCACTCATCAACTCACTGTTCTGG +
Preference number: 6 (lower is better)
Translates to: KILFLDPDPRVP*SMLPLINSLFW
Trigger: CCAGAACAGTGAGTTGATGAGTGGCAGCATGGACAAAGGAACCCTAGGGTCAGGATCCAAGAACAATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372371.8
ENST00000472014.5
ENST00000473588.2
CDS CAA 72 bp GTCAGATCATACTGGGAGCAAAGATCTTCAAGAGATTaGACAAGCCTTCGCTGCATGTATCCCGTTTCAGCT +
Preference number: 6 (lower is better)
Translates to: VRSYWEQRSSRD*TSLRCMYPVSA
Trigger: AGCTGAAACGGGATACATGCAGCGAAGGCTTGTCAAATCTCTTGAAGATCTTTGCTCCCAGTATGATCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CAA 90 bp GTTAGTGGTCGGTTTAAGAACAGAAAGAGCCTGGCTTCTTTGGCGTaGTTAGTTGTGGTGGTGTTTTCATGTAAGTTTCCTTTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: VSGRFKNRKSLASLA*LVVVVFSCKFPLPP
Trigger: AGGAGGCAAAGGAAACTTACATGAAAACACCACCACAACTAACAACGCCAAAGAAGCCAGGCTCTTTCTGTTCTTAAACCGACCACTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484760.1
CDS TCA 72 bp TTTACCTTCTCAGGAAAAGTTAGAATTTTGGCCACATaGACTGGCACAGCTACCTCATCAATCCGGAGGTTG +
Preference number: 6 (lower is better)
Translates to: FTFSGKVRILAT*TGTATSSIRRL
Trigger: CAACCTCCGGATTGATGAGGTAGCTGTGCCAGTTCATGTGGCCAAAATTCTAACTTTTCCTGAGAAGGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CCA 72 bp ATATCGCCAGTAGAGCTTCGGACTGTCAGATCATACTaGGAGCAAAGATCTTCAAGAGATTTGACAAGCCTT +
Preference number: 6 (lower is better)
Translates to: ISPVELRTVRSY*EQRSSRDLTSL
Trigger: AAGGCTTGTCAAATCTCTTGAAGATCTTTGCTCCCAGTATGATCTGACAGTCCGAAGCTCTACTGGCGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000472014.5
CDS CAA 72 bp AGTGGTCGGTTTAAGAACAGAAAGAGCCTGGCTTCTTaGGCGTTGTTAGTTGTGGTGGTGTTTTCATGTAAG +
Preference number: 6 (lower is better)
Translates to: SGRFKNRKSLAS*ALLVVVVFSCK
Trigger: CTTACATGAAAACACCACCACAACTAACAACGCCAAAGAAGCCAGGCTCTTTCTGTTCTTAAACCGACCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484760.1
CDS CAA 90 bp ACATACCCCCATCAGAACAAGGGCCTCTGCTTTAGCTTCTTCTGTTaGAGGAAGATGAAGGTTCATTTCATCACCATCAAAGTCAGCATT +
Preference number: 6 (lower is better)
Translates to: TYPHQNKGLCFSFFC*RKMKVHFITIKVSI
Trigger: AATGCTGACTTTGATGGTGATGAAATGAACCTTCATCTTCCTCAAACAGAAGAAGCTAAAGCAGAGGCCCTTGTTCTGATGGGGGTATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484760.1
CDS TCA 72 bp GATGACTGTTCTGCCAGAAAAATCCACTCTCTTTCCTaGGAGATTTCCTCTAAATCGACCCTGTTTTCCCTT +
Preference number: 6 (lower is better)
Translates to: DDCSARKIHSLS*EISSKSTLFSL
Trigger: AAGGGAAAACAGGGTCGATTTAGAGGAAATCTCTCAGGAAAGAGAGTGGATTTTTCTGGCAGAACAGTCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372371.8
CDS CAA 72 bp AATGAAGTTTGCTCCTGGGTGAACCTCAGGGCCGTTTaGAACCAGTTTCCTCAAGAAATTGATGTTTGCTTT +
Preference number: 6 (lower is better)
Translates to: NEVCSWVNLRAV*NQFPQEIDVCF
Trigger: AAAGCAAACATCAATTTCTTGAGGAAACTGGTTCAAAACGGCCCTGAGGTTCACCCAGGAGCAAACTTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000484760.1
CDS CAA 90 bp TTTAGTCCCCATCAGAACAAGGGCCTCTGCTTTAGCTTCTTCTGTTaGAGGAAGATGAAGGTTCATTTCATCACCATCAAAGTCAGCATT +
Preference number: 6 (lower is better)
Translates to: FSPHQNKGLCFSFFC*RKMKVHFITIKVSI
Trigger: AATGCTGACTTTGATGGTGATGAAATGAACCTTCATCTTCCTCAAACAGAAGAAGCTAAAGCAGAGGCCCTTGTTCTGATGGGGACTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000473588.2
CDS TCA 72 bp AGGTGTCTCTCTACGATGTCACCATACTTGAGCTCTTaGGCCATCTTTTCTCGATTTCCGTATTTCAAAAAC +
Preference number: 6 (lower is better)
Translates to: RCLSTMSPYLSS*AIFSRFPYFKN
Trigger: GTTTTTGAAATACGGAAATCGAGAAAAGATGGCTCAAGAGCTCAAGTATGGTGACATCGTAGAGAGACACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372371.8
ENST00000473588.2
ENST00000484760.1
CDS TCA 72 bp GCGAACTTTAATTTTCTCATCCTTGCCAACCAGTATTaGAGCAATGATTTGGCAAGCCTTGGCTCGATCAAA +
Preference number: 6 (lower is better)
Translates to: ANFNFLILANQY*SNDLASLGSIK
Trigger: TTTGATCGAGCCAAGGCTTGCCAAATCATTGCTTCAATACTGGTTGGCAAGGATGAGAAAATTAAAGTTCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372371.8
ENST00000473588.2
CDS CAA 72 bp GAGGTGTCTCTCTACGATGTCACCATACTTGAGCTCTaGAGCCATCTTTTCTCGATTTCCGTATTTCAAAAA +
Preference number: 6 (lower is better)
Translates to: EVSLYDVTILEL*SHLFSISVFQK
Trigger: TTTTTGAAATACGGAAATCGAGAAAAGATGGCTCAAGAGCTCAAGTATGGTGACATCGTAGAGAGACACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372371.8
ENST00000473588.2
ENST00000484760.1
CDS CAA 72 bp CATCAGAACAAGGGCCTCTGCTTTAGCTTCTTCTGTTaGAGGAAGATGAAGGTTCATTTCATCACCATCAAA +
Preference number: 6 (lower is better)
Translates to: HQNKGLCFSFFC*RKMKVHFITIK
Trigger: TTTGATGGTGATGAAATGAACCTTCATCTTCCTCAAACAGAAGAAGCTAAAGCAGAGGCCCTTGTTCTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372371.8
ENST00000473588.2
ENST00000484760.1