Pregenerated sensors for POLR2M (Homo sapiens)
Ensembl gene IDs: ENSG00000255529Ensembl transcript IDs: ENST00000464277.2, ENST00000464308.1, ENST00000482852.5, ENST00000494490.2, ENST00000562260.1
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGCAGCAAGCCCTCCGTCCACTCGCCCGTAGGACTGAAGCGAATGTaGCTGAGTCAAAGTCACCTTCCAGGGAAGGGAACAGAGTGCGGG | + |
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Preference number: 1 (lower is better) Translates to: RSKPSVHSPVGLKRM*LSQSHLPGKGTECG Trigger: CCCGCACTCTGTTCCCTTCCCTGGAAGGTGACTTTGACTCAGTCACATTCGCTTCAGTCCTACGGGCGAGTGGACGGAGGGCTTGCTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464277.2 ENST00000494490.2 |
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| 3UTR CCA 90 bp | TGTCAGGATCCTGGAATGTTCACCCAGGCAGCTTGGAAAAAGGAATaGGGCTGCAGCCATTGTGGGGACAGCAGTCTCCCTTCTAGCACT | + |
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Preference number: 1 (lower is better) Translates to: CQDPGMFTQAAWKKE*GCSHCGDSSLPSST Trigger: AGTGCTAGAAGGGAGACTGCTGTCCCCACAATGGCTGCAGCCCCATTCCTTTTTCCAAGCTGCCTGGGTGAACATTCCAGGATCCTGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| 3UTR CCA 90 bp | GTCCATGGACAGGCTAGACGGCATCAAGGTGTGAAGAAAAGAGCTTaGGCTTTAGAGCCAACCGTGACTCATCACCTCCCAGTGTCAAGG | + |
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Preference number: 1 (lower is better) Translates to: VHGQARRHQGVKKRA*ALEPTVTHHLPVSR Trigger: CCTTGACACTGGGAGGTGATGAGTCACGGTTGGCTCTAAAGCCCAAGCTCTTTTCTTCACACCTTGATGCCGTCTAGCCTGTCCATGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| 3UTR CCA 90 bp | ACTGGAGGAATTAATGTAGAATTGGAGACATCAAGGAAGGCTTCCTaGAAGGCATGGTGTCTGAGTCTTAAACTACAGGTTAGACTGAGC | + |
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Preference number: 1 (lower is better) Translates to: TGGINVELETSRKAS*KAWCLSLKLQVRLS Trigger: GCTCAGTCTAACCTGTAGTTTAAGACTCAGACACCATGCCTTCCAGGAAGCCTTCCTTGATGTCTCCAATTCTACATTAATTCCTCCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| 3UTR-3UTR TCA 90 bp | CTGGCCAGGAAGAGGCACGGCTCTGCCGCAGCAAGCCCTCCGTCCACTCGCCCGCCAGGGAGCTCGAGCTaGAGGAGCCTGGCGGAGACT | + |
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Preference number: 2 (lower is better) Translates to: LARKRHGSAAASPPSTRPPGSSS*RSLAET Trigger: AGTCTCCGCCAGGCTCCTTCAGCTCGAGCTCCCTGG...CGGGCGAGTGGACGGAGGGCTTGCTGCGGCAGAGCCGTGCCTCTTCCTGGCCAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464277.2 ENST00000494490.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGAGGCACGGCTCTGCCGCAGCAAGCCCTCCGTCCACTCGCCCGTAGGACTCGAGCTGAAGGAGCCTaGCGGAGACTCCGCGGGACC | + |
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Preference number: 2 (lower is better) Translates to: GRGTALPQQALRPLARRTRAEGA*RRLRGT Trigger: GGTCCCGCGGAGTCTCCGCCAGGCTCCTTCAGCTCG...AGTCCTACGGGCGAGTGGACGGAGGGCTTGCTGCGGCAGAGCCGTGCCTCTTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464277.2 ENST00000494490.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCGCAGCAAGCCCTCCGTCCACTCGCCCGTAGGACTGAAGCGAATGTGACTCGAGCTGAAGGAGCCTaGCGGAGACTCCGCGGGACC | + |
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Preference number: 2 (lower is better) Translates to: LPQQALRPLARRTEANVTRAEGA*RRLRGT Trigger: GGTCCCGCGGAGTCTCCGCCAGGCTCCTTCAGCTCG...AGTCACATTCGCTTCAGTCCTACGGGCGAGTGGACGGAGGGCTTGCTGCGGCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464277.2 ENST00000494490.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCCGCAGCAAGCCCTCCGTCCACTCGCCCGTAGGACTGAAGCGAATGTGACTCCAGGGAGCTCGAGCTaGAGGAGCCTGGCGGAGACT | + |
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Preference number: 2 (lower is better) Translates to: LPQQALRPLARRTEANVTPGSSS*RSLAET Trigger: AGTCTCCGCCAGGCTCCTTCAGCTCGAGCTCCCTGG...AGTCACATTCGCTTCAGTCCTACGGGCGAGTGGACGGAGGGCTTGCTGCGGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464277.2 ENST00000494490.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGCCAGGAAGAGGCACGGCTCTGCCGCAGCAAGCCCTCCGTCCACTCGCCGGACTGAAGCGAATGTaGCTGAGTCAAAGTCACCTT | + |
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Preference number: 2 (lower is better) Translates to: AWPGRGTALPQQALRPLAGLKRM*LSQSHL Trigger: AAGGTGACTTTGACTCAGTCACATTCGCTTCAGTCC...GGCGAGTGGACGGAGGGCTTGCTGCGGCAGAGCCGTGCCTCTTCCTGGCCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494490.2 |
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| 3UTR-3UTR CCA 90 bp | TCCATGATGGGCAGTGAGATGTTTGCTGTGCTGCTGACATCTACTGAGAGACTGGGGCTGCAGCCATTGTaGGGACAGCAGTCTCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: SMMGSEMFAVLLTSTERLGLQPL*GQQSPF Trigger: GAAGGGAGACTGCTGTCCCCACAATGGCTGCAGCCC...CAGTCTCTCAGTAGATGTCAGCAGCACAGCAAACATCTCACTGCCCATCATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| 3UTR-3UTR TCA 90 bp | GGAAAGATACCCAGCTCTCTGGAGCCTCGGTTTCCTGCTTCCATGATGGGCAGTTGTTTGCTGTGCTGCTaGCATCTACTGAGAGACTGT | + |
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Preference number: 2 (lower is better) Translates to: GKIPSSLEPRFPASMMGSCLLCC*HLLRDC Trigger: ACAGTCTCTCAGTAGATGTCAGCAGCACAGCAAACA...ACTGCCCATCATGGAAGCAGGAAACCGAGGCTCCAGAGAGCTGGGTATCTTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| 3UTR-3UTR TCA 90 bp | GGAAAGATACCCAGCTCTCTGGAGCCTCGGTTTCCTGCTTCCATGATGGGCAGTGTCTTCCTGGCTAAATaGTGGTCAAACTGCTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: GKIPSSLEPRFPASMMGSVFLAK*WSNCSK Trigger: TTTGGAGCAGTTTGACCATCATTTAGCCAGGAAGAC...ACTGCCCATCATGGAAGCAGGAAACCGAGGCTCCAGAGAGCTGGGTATCTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| 3UTR-3UTR TCA 90 bp | GGAAAGATACCCAGCTCTCTGGAGCCTCGGTTTCCTGCTTCCATGATGGGCAGTCACATCATCGACCTTTaGGCAAGCACTCATCAATTT | + |
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Preference number: 2 (lower is better) Translates to: GKIPSSLEPRFPASMMGSHIIDL*ASTHQF Trigger: AAATTGATGAGTGCTTGCTCAAAGGTCGATGATGTG...ACTGCCCATCATGGAAGCAGGAAACCGAGGCTCCAGAGAGCTGGGTATCTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| 3UTR-3UTR CCA 90 bp | CAAGGTGTGAAGAAAAGAGCTTGGGCTTTAGAGCCAACCGTGACTCATCACCTCCCAGTGTCAAGGCCTTaGAAAGATACCCAGCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: QGVKKRAWALEPTVTHHLPVSRP*KDTQLS Trigger: AGAGAGCTGGGTATCTTTCCAAGGCCTTGACACTGG...GAGGTGATGAGTCACGGTTGGCTCTAAAGCCCAAGCTCTTTTCTTCACACCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| 3UTR-3UTR CCA 90 bp | ACAGGTGATGCCATCTGTAGCACATCATCGACCTTTGAGCAAGCACTCATCAATAGAATGTCAGGATCCTaGAATGTTCACCCAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: TGDAICSTSSTFEQALINRMSGS*NVHPGS Trigger: GCTGCCTGGGTGAACATTCCAGGATCCTGACATTCT...ATTGATGAGTGCTTGCTCAAAGGTCGATGATGTGCTACAGATGGCATCACCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| 3UTR TCA 72 bp | CCCTCCGTCCACTCGCCCGTAGGACTGAAGCGAATGTaGCTGAGTCAAAGTCACCTTCCAGGGAAGGGAACA | + |
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Preference number: 3 (lower is better) Translates to: PSVHSPVGLKRM*LSQSHLPGKGT Trigger: TGTTCCCTTCCCTGGAAGGTGACTTTGACTCAGTCACATTCGCTTCAGTCCTACGGGCGAGTGGACGGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464277.2 ENST00000494490.2 |
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| 3UTR CCA 72 bp | CAGGCTAGACGGCATCAAGGTGTGAAGAAAAGAGCTTaGGCTTTAGAGCCAACCGTGACTCATCACCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: QARRHQGVKKRA*ALEPTVTHHLP Trigger: TGGGAGGTGATGAGTCACGGTTGGCTCTAAAGCCCAAGCTCTTTTCTTCACACCTTGATGCCGTCTAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| 3UTR-3UTR CAA 90 bp | GGAAAGATACCCAGCTCTCTGGAGCCTCGGTTTCCTGCTTCCATGATGGGCAGTGCACATCATCGACCTTaGAGCAAGCACTCATCAATT | + |
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Preference number: 3 (lower is better) Translates to: GKIPSSLEPRFPASMMGSAHHRP*SKHSSI Trigger: AATTGATGAGTGCTTGCTCAAAGGTCGATGATGTGC...ACTGCCCATCATGGAAGCAGGAAACCGAGGCTCCAGAGAGCTGGGTATCTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| 3UTR TCA 72 bp | AAGACCTGGTGCCTTCCCTCAAGTGAGGAAGCAGTTTaGTATAGACACCTCAGGGTAAGATTAAGTTACTGT | + |
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Preference number: 3 (lower is better) Translates to: KTWCLPSSEEAV*YRHLRVRLSYC Trigger: ACAGTAACTTAATCTTACCCTGAGGTGTCTATATCAAACTGCTTCCTCACTTGAGGGAAGGCACCAGGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR CCA 90 bp | GCCTGGCCAGGAAGAGGCACGGCTCTGCCGCAGCAAGCCCTCCGTCCACTCGCCCGAGCTGAAGGAGCCTaGCGGAGACTCCGCGGGACC | + |
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Preference number: 4 (lower is better) Translates to: AWPGRGTALPQQALRPLARAEGA*RRLRGT Trigger: GGTCCCGCGGAGTCTCCGCCAGGCTCCTTCAGCTCG...GGCGAGTGGACGGAGGGCTTGCTGCGGCAGAGCCGTGCCTCTTCCTGGCCAGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494490.2 |
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| CDS-3UTR GCA 90 bp | CTGGCCAGGAAGAGGCACGGCTCTGCCGCAGCAAGCCCTCCGTCCACTCGCCCGGAAGAGGCACGGCTCTaGCGCAGCAAGCCCTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: LARKRHGSAAASPPSTRPEEARL*RSKPSV Trigger: GACGGAGGGCTTGCTGCGGCAGAGCCGTGCCTCTTC...CGGGCGAGTGGACGGAGGGCTTGCTGCGGCAGAGCCGTGCCTCTTCCTGGCCAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464277.2 ENST00000494490.2 |
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| CDS-3UTR GCA 90 bp | GCCTGGCCAGGAAGAGGCACGGCTCTGCCGCAGCAAGCCCTCCGTCCACTCGCCGAAGAGGCACGGCTCTaGCGCAGCAAGCCCTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: AWPGRGTALPQQALRPLAEEARL*RSKPSV Trigger: GACGGAGGGCTTGCTGCGGCAGAGCCGTGCCTCTTC...GGCGAGTGGACGGAGGGCTTGCTGCGGCAGAGCCGTGCCTCTTCCTGGCCAGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494490.2 |
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| CDS-3UTR TCA 90 bp | TTCTGGCCAGGAAGAGGCACGGCTCTGCCGCAGCAAGCCCTCCGTCCACTCGCCCCAGGGAGCTCGAGCTaGAGGAGCCTGGCGGAGACT | + |
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Preference number: 4 (lower is better) Translates to: FWPGRGTALPQQALRPLAPGSSS*RSLAET Trigger: AGTCTCCGCCAGGCTCCTTCAGCTCGAGCTCCCTGG...GGCGAGTGGACGGAGGGCTTGCTGCGGCAGAGCCGTGCCTCTTCCTGGCCAGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464277.2 |
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| CDS-3UTR TCA 90 bp | GCCTGGCCAGGAAGAGGCACGGCTCTGCCGCAGCAAGCCCTCCGTCCACTCGCCATCTTCCGCTTGACTTaGAACACGATGCCGCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: AWPGRGTALPQQALRPLAIFRLT*NTMPRV Trigger: CACCCGCGGCATCGTGTTTCAAGTCAAGCGGAAGAT...GGCGAGTGGACGGAGGGCTTGCTGCGGCAGAGCCGTGCCTCTTCCTGGCCAGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494490.2 |
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| CDS-3UTR CCA 90 bp | CTGGCCAGGAAGAGGCACGGCTCTGCCGCAGCAAGCCCTCCGTCCACTCGCCCGAATGAATTTTGTGCCTaGCCAGGAAGAGGCACGGCT | + |
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Preference number: 4 (lower is better) Translates to: LARKRHGSAAASPPSTRPNEFCA*PGRGTA Trigger: AGCCGTGCCTCTTCCTGGCCAGGCACAAAATTCATT...CGGGCGAGTGGACGGAGGGCTTGCTGCGGCAGAGCCGTGCCTCTTCCTGGCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494490.2 |
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| CDS-3UTR TCA 90 bp | CTGGCCAGGAAGAGGCACGGCTCTGCCGCAGCAAGCCCTCCGTCCACTCGCCCGGGACTGAAGCGAATGTaGCTGAGTCAAAGTCACCTT | + |
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Preference number: 4 (lower is better) Translates to: LARKRHGSAAASPPSTRPGLKRM*LSQSHL Trigger: AAGGTGACTTTGACTCAGTCACATTCGCTTCAGTCC...CGGGCGAGTGGACGGAGGGCTTGCTGCGGCAGAGCCGTGCCTCTTCCTGGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464277.2 ENST00000494490.2 |
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| CDS-3UTR CCA 90 bp | CTCCGTCCACTCGCCCGTAGGACTGAAGCGAATGTGACTGAGTCAAAGTCACCTCGAGCTGAAGGAGCCTaGCGGAGACTCCGCGGGACC | + |
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Preference number: 4 (lower is better) Translates to: LRPLARRTEANVTESKSPRAEGA*RRLRGT Trigger: GGTCCCGCGGAGTCTCCGCCAGGCTCCTTCAGCTCG...AGGTGACTTTGACTCAGTCACATTCGCTTCAGTCCTACGGGCGAGTGGACGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464277.2 ENST00000494490.2 |
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| CDS-3UTR TCA 90 bp | CTGCCGCAGCAAGCCCTCCGTCCACTCGCCCGTAGGACTGAAGCGAATGTGACTATCTTCCGCTTGACTTaGAACACGATGCCGCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LPQQALRPLARRTEANVTIFRLT*NTMPRV Trigger: CACCCGCGGCATCGTGTTTCAAGTCAAGCGGAAGAT...AGTCACATTCGCTTCAGTCCTACGGGCGAGTGGACGGAGGGCTTGCTGCGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464277.2 ENST00000494490.2 |
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| CDS-3UTR TCA 90 bp | CTCCGTCCACTCGCCCGTAGGACTGAAGCGAATGTGACTGAGTCAAAGTCACCTCCAGGGAGCTCGAGCTaGAGGAGCCTGGCGGAGACT | + |
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Preference number: 4 (lower is better) Translates to: LRPLARRTEANVTESKSPPGSSS*RSLAET Trigger: AGTCTCCGCCAGGCTCCTTCAGCTCGAGCTCCCTGG...AGGTGACTTTGACTCAGTCACATTCGCTTCAGTCCTACGGGCGAGTGGACGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464277.2 ENST00000494490.2 |
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| CDS-3UTR TCA 90 bp | GGAAGAGGCACGGCTCTGCCGCAGCAAGCCCTCCGTCCACTCGCCCGTAGGACTGGACTGAAGCGAATGTaGCTGAGTCAAAGTCACCTT | + |
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Preference number: 4 (lower is better) Translates to: GRGTALPQQALRPLARRTGLKRM*LSQSHL Trigger: AAGGTGACTTTGACTCAGTCACATTCGCTTCAGTCC...AGTCCTACGGGCGAGTGGACGGAGGGCTTGCTGCGGCAGAGCCGTGCCTCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000464277.2 ENST00000494490.2 |
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| CDS-3UTR GCA 90 bp | CTGCCGCAGCAAGCCCTCCGTCCACTCGCCCGTAGGACTGAAGCGAATGTGACTCCCCAGCTTACTCGTTaGGCAAAAGTCTCTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LPQQALRPLARRTEANVTPQLTR*AKVSPG Trigger: GCCAGGAGAGACTTTTGCGCAACGAGTAAGCTGGGG...AGTCACATTCGCTTCAGTCCTACGGGCGAGTGGACGGAGGGCTTGCTGCGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000464277.2 ENST00000494490.2 |
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| CDS-3UTR TCA 90 bp | GGAAGAGGCACGGCTCTGCCGCAGCAAGCCCTCCGTCCACTCGCCCGTAGGACTCGGGCAATTTGCAAATaGATTTTCTGGCCAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: GRGTALPQQALRPLARRTRAICK*IFWPGR Trigger: TCTTCCTGGCCAGAAAATTCATTTGCAAATTGCCCG...AGTCCTACGGGCGAGTGGACGGAGGGCTTGCTGCGGCAGAGCCGTGCCTCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464277.2 |
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| CDS-3UTR TCA 90 bp | CTGCCGCAGCAAGCCCTCCGTCCACTCGCCCGTAGGACTGAAGCGAATGTGACTCGGGCAATTTGCAAATaGATTTTGTGCCTGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LPQQALRPLARRTEANVTRAICK*ILCLAR Trigger: CCTGGCCAGGCACAAAATTCATTTGCAAATTGCCCG...AGTCACATTCGCTTCAGTCCTACGGGCGAGTGGACGGAGGGCTTGCTGCGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494490.2 |
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| 3UTR CAA 72 bp | GCCAACCGTGACTCATCACCTCCCAGTGTCAAGGCCTaGGAAAGATACCCAGCTCTCTGGAGCCTCGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: ANRDSSPPSVKA*ERYPALWSLGF Trigger: GAAACCGAGGCTCCAGAGAGCTGGGTATCTTTCCAAGGCCTTGACACTGGGAGGTGATGAGTCACGGTTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR TCA 90 bp | GGAAAGATACCCAGCTCTCTGGAGCCTCGGTTTCCTGCTTCCATGATGGGCAGTCTTCCTATCTGGACATaGAGAAAGGCACCTGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GKIPSSLEPRFPASMMGSLPIWT*RKAPGA Trigger: AGCCCCAGGTGCCTTTCTTCATGTCCAGATAGGAAG...ACTGCCCATCATGGAAGCAGGAAACCGAGGCTCCAGAGAGCTGGGTATCTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR CCA 90 bp | CAAGGTGTGAAGAAAAGAGCTTGGGCTTTAGAGCCAACCGTGACTCATCACCTCGGGCTGCAGCCATTGTaGGGACAGCAGTCTCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: QGVKKRAWALEPTVTHHLGLQPL*GQQSPF Trigger: GAAGGGAGACTGCTGTCCCCACAATGGCTGCAGCCC...GAGGTGATGAGTCACGGTTGGCTCTAAAGCCCAAGCTCTTTTCTTCACACCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR TCA 90 bp | TCCATGATGGGCAGTGAGATGTTTGCTGTGCTGCTGACATCTACTGAGAGACTGCTGCGGCTGCCAAGCTaGGCAAGTTCATGGAACTGC | + |
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Preference number: 4 (lower is better) Translates to: SMMGSEMFAVLLTSTERLLRLPS*ASSWNC Trigger: GCAGTTCCATGAACTTGCTCAGCTTGGCAGCCGCAG...CAGTCTCTCAGTAGATGTCAGCAGCACAGCAAACATCTCACTGCCCATCATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR TCA 90 bp | GGAAAGATACCCAGCTCTCTGGAGCCTCGGTTTCCTGCTTCCATGATGGGCAGTGGTTTCCTGCTTCCATaGTGGGCAGTGAGATGTTTG | + |
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Preference number: 4 (lower is better) Translates to: GKIPSSLEPRFPASMMGSGFLLP*WAVRCL Trigger: CAAACATCTCACTGCCCATCATGGAAGCAGGAAACC...ACTGCCCATCATGGAAGCAGGAAACCGAGGCTCCAGAGAGCTGGGTATCTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR TCA 90 bp | CAAGGTGTGAAGAAAAGAGCTTGGGCTTTAGAGCCAACCGTGACTCATCACCTCATCTTCCGCTTGACTTaGAACACGATGCCGCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: QGVKKRAWALEPTVTHHLIFRLT*NTMPRV Trigger: CACCCGCGGCATCGTGTTTCAAGTCAAGCGGAAGAT...GAGGTGATGAGTCACGGTTGGCTCTAAAGCCCAAGCTCTTTTCTTCACACCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR TCA 90 bp | CAAGGTGTGAAGAAAAGAGCTTGGGCTTTAGAGCCAACCGTGACTCATCACCTCGCTCTGCCTCACCTTTaGGGTCTAGAGTGTAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: QGVKKRAWALEPTVTHHLALPHL*GLECSR Trigger: CCTACTACACTCTAGACCTCAAAGGTGAGGCAGAGC...GAGGTGATGAGTCACGGTTGGCTCTAAAGCCCAAGCTCTTTTCTTCACACCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR GCA 90 bp | CAAGGTGTGAAGAAAAGAGCTTGGGCTTTAGAGCCAACCGTGACTCATCACCTCGTCCTTAGCTGCGGCTaGCAAGCTGAGCAAGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: QGVKKRAWALEPTVTHHLVLSCG*QAEQVH Trigger: ATGAACTTGCTCAGCTTGGCAGCCGCAGCTAAGGAC...GAGGTGATGAGTCACGGTTGGCTCTAAAGCCCAAGCTCTTTTCTTCACACCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR GCA 90 bp | ACAGGTGATGCCATCTGTAGCACATCATCGACCTTTGAGCAAGCACTCATCAATACGGGTGTCCTTAGCTaGGGCTGCCAAGCTGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: TGDAICSTSSTFEQALINTGVLS*GCQAEQ Trigger: TTGCTCAGCTTGGCAGCCGCAGCTAAGGACACCCGT...ATTGATGAGTGCTTGCTCAAAGGTCGATGATGTGCTACAGATGGCATCACCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR CCA 90 bp | CAAGGTGTGAAGAAAAGAGCTTGGGCTTTAGAGCCAACCGTGACTCATCACCTCAGATACCCAGCTCTCTaGAGCCTCGGTTTCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: QGVKKRAWALEPTVTHHLRYPAL*SLGFLL Trigger: AAGCAGGAAACCGAGGCTCCAGAGAGCTGGGTATCT...GAGGTGATGAGTCACGGTTGGCTCTAAAGCCCAAGCTCTTTTCTTCACACCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR TCA 90 bp | GGAAAGATACCCAGCTCTCTGGAGCCTCGGTTTCCTGCTTCCATGATGGGCAGTAATCAAAGCTCCTCTTaGGAAAGCTCTGTCTCTAAC | + |
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Preference number: 4 (lower is better) Translates to: GKIPSSLEPRFPASMMGSNQSSS*ESSVSN Trigger: GTTAGAGACAGAGCTTTCTCAAGAGGAGCTTTGATT...ACTGCCCATCATGGAAGCAGGAAACCGAGGCTCCAGAGAGCTGGGTATCTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR TCA 90 bp | CAAGGTGTGAAGAAAAGAGCTTGGGCTTTAGAGCCAACCGTGACTCATCACCTCTTCCATGATGGGCAGTaGGATGTTTGCTGTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QGVKKRAWALEPTVTHHLFHDGQ*DVCCAA Trigger: AGCAGCACAGCAAACATCTCACTGCCCATCATGGAA...GAGGTGATGAGTCACGGTTGGCTCTAAAGCCCAAGCTCTTTTCTTCACACCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR TCA 90 bp | TCCATGATGGGCAGTGAGATGTTTGCTGTGCTGCTGACATCTACTGAGAGACTGAGACTGAGCCACACATaGAGAGAAGTTAGAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: SMMGSEMFAVLLTSTERLRLSHT*REVRGP Trigger: GGGTCCTCTAACTTCTCTTCATGTGTGGCTCAGTCT...CAGTCTCTCAGTAGATGTCAGCAGCACAGCAAACATCTCACTGCCCATCATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR CCA 90 bp | CAAGGTGTGAAGAAAAGAGCTTGGGCTTTAGAGCCAACCGTGACTCATCACCTCAGAATGTCAGGATCCTaGAATGTTCACCCAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QGVKKRAWALEPTVTHHLRMSGS*NVHPGS Trigger: GCTGCCTGGGTGAACATTCCAGGATCCTGACATTCT...GAGGTGATGAGTCACGGTTGGCTCTAAAGCCCAAGCTCTTTTCTTCACACCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR TCA 90 bp | CAAGGTGTGAAGAAAAGAGCTTGGGCTTTAGAGCCAACCGTGACTCATCACCTCTGTTTGCTGTGCTGCTaGCATCTACTGAGAGACTGT | + |
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Preference number: 4 (lower is better) Translates to: QGVKKRAWALEPTVTHHLCLLCC*HLLRDC Trigger: ACAGTCTCTCAGTAGATGTCAGCAGCACAGCAAACA...GAGGTGATGAGTCACGGTTGGCTCTAAAGCCCAAGCTCTTTTCTTCACACCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR GCA 90 bp | CAAGGTGTGAAGAAAAGAGCTTGGGCTTTAGAGCCAACCGTGACTCATCACCTCGCAAGTTCATGGAACTaGGGTACTGAGGGCTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: QGVKKRAWALEPTVTHHLASSWN*GTEGCK Trigger: TTTACAGCCCTCAGTACCGCAGTTCCATGAACTTGC...GAGGTGATGAGTCACGGTTGGCTCTAAAGCCCAAGCTCTTTTCTTCACACCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR GCA 90 bp | TCCATGATGGGCAGTGAGATGTTTGCTGTGCTGCTGACATCTACTGAGAGACTGGTAAACAAGACCTGGTaGCTTCCCTCAAGTGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SMMGSEMFAVLLTSTERLVNKTW*LPSSEE Trigger: TTCCTCACTTGAGGGAAGGCACCAGGTCTTGTTTAC...CAGTCTCTCAGTAGATGTCAGCAGCACAGCAAACATCTCACTGCCCATCATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR TCA 90 bp | TCCATGATGGGCAGTGAGATGTTTGCTGTGCTGCTGACATCTACTGAGAGACTGGGAGGGATGTCATTTTaGTATACCTGTTGGTCACTG | + |
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Preference number: 4 (lower is better) Translates to: SMMGSEMFAVLLTSTERLGGMSF*YTCWSL Trigger: CAGTGACCAACAGGTATATCAAAATGACATCCCTCC...CAGTCTCTCAGTAGATGTCAGCAGCACAGCAAACATCTCACTGCCCATCATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR TCA 90 bp | CAAGGTGTGAAGAAAAGAGCTTGGGCTTTAGAGCCAACCGTGACTCATCACCTCAACTACAGGTTAGACTaGGCCACACATGAAGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: QGVKKRAWALEPTVTHHLNYRLD*ATHEEK Trigger: CTTCTCTTCATGTGTGGCTCAGTCTAACCTGTAGTT...GAGGTGATGAGTCACGGTTGGCTCTAAAGCCCAAGCTCTTTTCTTCACACCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR CCA 90 bp | ACAGGTGATGCCATCTGTAGCACATCATCGACCTTTGAGCAAGCACTCATCAATCCAGTGTCAAGGCCTTaGAAAGATACCCAGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: TGDAICSTSSTFEQALINPVSRP*KDTQLS Trigger: AGAGAGCTGGGTATCTTTCCAAGGCCTTGACACTGG...ATTGATGAGTGCTTGCTCAAAGGTCGATGATGTGCTACAGATGGCATCACCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR CCA 90 bp | ACAGGTGATGCCATCTGTAGCACATCATCGACCTTTGAGCAAGCACTCATCAATTCAAGGAAGGCTTCCTaGAAGGCATGGTGTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: TGDAICSTSSTFEQALINSRKAS*KAWCLS Trigger: ACTCAGACACCATGCCTTCCAGGAAGCCTTCCTTGA...ATTGATGAGTGCTTGCTCAAAGGTCGATGATGTGCTACAGATGGCATCACCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR CCA 90 bp | CAAGGTGTGAAGAAAAGAGCTTGGGCTTTAGAGCCAACCGTGACTCATCACCTCAATGTAAACAAGACCTaGTGCCTTCCCTCAAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: QGVKKRAWALEPTVTHHLNVNKT*CLPSSE Trigger: CTCACTTGAGGGAAGGCACCAGGTCTTGTTTACATT...GAGGTGATGAGTCACGGTTGGCTCTAAAGCCCAAGCTCTTTTCTTCACACCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR CCA 90 bp | ACAGGTGATGCCATCTGTAGCACATCATCGACCTTTGAGCAAGCACTCATCAATGTGAAGAAAAGAGCTTaGGCTTTAGAGCCAACCGTG | + |
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Preference number: 4 (lower is better) Translates to: TGDAICSTSSTFEQALINVKKRA*ALEPTV Trigger: CACGGTTGGCTCTAAAGCCCAAGCTCTTTTCTTCAC...ATTGATGAGTGCTTGCTCAAAGGTCGATGATGTGCTACAGATGGCATCACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR TCA 90 bp | ACAGGTGATGCCATCTGTAGCACATCATCGACCTTTGAGCAAGCACTCATCAATGTCTTCCTGGCTAAATaGTGGTCAAACTGCTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: TGDAICSTSSTFEQALINVFLAK*WSNCSK Trigger: TTTGGAGCAGTTTGACCATCATTTAGCCAGGAAGAC...ATTGATGAGTGCTTGCTCAAAGGTCGATGATGTGCTACAGATGGCATCACCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR CCA 90 bp | ACAGGTGATGCCATCTGTAGCACATCATCGACCTTTGAGCAAGCACTCATCAATGCTTCCTGGAAGGCATaGTGTCTGAGTCTTAAACTA | + |
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Preference number: 4 (lower is better) Translates to: TGDAICSTSSTFEQALINASWKA*CLSLKL Trigger: TAGTTTAAGACTCAGACACCATGCCTTCCAGGAAGC...ATTGATGAGTGCTTGCTCAAAGGTCGATGATGTGCTACAGATGGCATCACCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS CCA 90 bp | CCAGGTAGCCGTTCAATCCGAGCTATCCTCGCAGGCATACGTGCCTaGCCAGGAAGAGGCACGGCTCTGCCGCAGCAAGCCCTCCGTCCA | + |
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Preference number: 5 (lower is better) Translates to: PGSRSIRAILAGIRA*PGRGTALPQQALRP Trigger: TGGACGGAGGGCTTGCTGCGGCAGAGCCGTGCCTCTTCCTGGCCAGGCACGTATGCCTGCGAGGATAGCTCGGATTGAACGGCTACCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464308.1 |
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| CDS-3UTR CAA 90 bp | TTCTGGCCAGGAAGAGGCACGGCTCTGCCGCAGCAAGCCCTCCGTCCACTCGCCACCCCAGCTTACTCGTaGCGCAAAAGTCTCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: FWPGRGTALPQQALRPLATPAYS*RKSLSW Trigger: CCAGGAGAGACTTTTGCGCAACGAGTAAGCTGGGGT...GGCGAGTGGACGGAGGGCTTGCTGCGGCAGAGCCGTGCCTCTTCCTGGCCAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000464277.2 |
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| CDS-3UTR CAA 90 bp | CTGCCGCAGCAAGCCCTCCGTCCACTCGCCCGTAGGACTGAAGCGAATGTGACTACCCCAGCTTACTCGTaGCGCAAAAGTCTCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: LPQQALRPLARRTEANVTTPAYS*RKSLSW Trigger: CCAGGAGAGACTTTTGCGCAACGAGTAAGCTGGGGT...AGTCACATTCGCTTCAGTCCTACGGGCGAGTGGACGGAGGGCTTGCTGCGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000464277.2 ENST00000494490.2 |
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| CDS GCA 90 bp | CAGGGAGCCCATCTTCCCGCTTTTACTACCACGGGTGTCCTTAGCTaGGGCTGCCAAGCTGAGCAAGTTCATGGAACTGCGGTACTGAGG | + |
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Preference number: 5 (lower is better) Translates to: QGAHLPAFTTTGVLS*GCQAEQVHGTAVLR Trigger: CCTCAGTACCGCAGTTCCATGAACTTGCTCAGCTTGGCAGCCGCAGCTAAGGACACCCGTGGTAGTAAAAGCGGGAAGATGGGCTCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS GCA 90 bp | GCCCATCTTCCCGCTTTTACTACCACGGGTGTCCTTAGCTGCGGCTaGCAAGCTGAGCAAGTTCATGGAACTGCGGTACTGAGGGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: AHLPAFTTTGVLSCG*QAEQVHGTAVLRAV Trigger: TACAGCCCTCAGTACCGCAGTTCCATGAACTTGCTCAGCTTGGCAGCCGCAGCTAAGGACACCCGTGGTAGTAAAAGCGGGAAGATGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR CAA 90 bp | GGAAAGATACCCAGCTCTCTGGAGCCTCGGTTTCCTGCTTCCATGATGGGCAGTCAAATGAATTTTTCGTaGCGCAAAAGTCTCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: GKIPSSLEPRFPASMMGSQMNFS*RKSLSW Trigger: CCAGGAGAGACTTTTGCGCAACGAAAAATTCATTTG...ACTGCCCATCATGGAAGCAGGAAACCGAGGCTCCAGAGAGCTGGGTATCTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS TCA 90 bp | TCAAGGAGACAGAGAAGAGAACATTGCTGTTCATCTTGTTGTGAGTaGCAGGAGACTGAACCAACATGGCGGCAGTGGGAACAGGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: SRRQRREHCCSSCCE*QETEPTWRQWEQEG Trigger: TCCTTCCTGTTCCCACTGCCGCCATGTTGGTTCAGTCTCCTGTCACTCACAACAAGATGAACAGCAATGTTCTCTTCTCTGTCTCCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562260.1 |
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| CDS-3UTR CAA 90 bp | CAAGGTGTGAAGAAAAGAGCTTGGGCTTTAGAGCCAACCGTGACTCATCACCTCTGTGAAGAAAAGAGCTaGGGCTTTAGAGCCAACCGT | + |
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Preference number: 5 (lower is better) Translates to: QGVKKRAWALEPTVTHHLCEEKS*GFRANR Trigger: ACGGTTGGCTCTAAAGCCCAAGCTCTTTTCTTCACA...GAGGTGATGAGTCACGGTTGGCTCTAAAGCCCAAGCTCTTTTCTTCACACCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR CAA 90 bp | ACAGGTGATGCCATCTGTAGCACATCATCGACCTTTGAGCAAGCACTCATCAATGCACATCATCGACCTTaGAGCAAGCACTCATCAATT | + |
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Preference number: 5 (lower is better) Translates to: TGDAICSTSSTFEQALINAHHRP*SKHSSI Trigger: AATTGATGAGTGCTTGCTCAAAGGTCGATGATGTGC...ATTGATGAGTGCTTGCTCAAAGGTCGATGATGTGCTACAGATGGCATCACCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR CAA 90 bp | ACAGGTGATGCCATCTGTAGCACATCATCGACCTTTGAGCAAGCACTCATCAATAGGAGGGATGTCATTTaGATATACCTGTTGGTCACT | + |
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Preference number: 5 (lower is better) Translates to: TGDAICSTSSTFEQALINRRDVI*IYLLVT Trigger: AGTGACCAACAGGTATATCAAAATGACATCCCTCCT...ATTGATGAGTGCTTGCTCAAAGGTCGATGATGTGCTACAGATGGCATCACCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS-3UTR CAA 90 bp | ACAGGTGATGCCATCTGTAGCACATCATCGACCTTTGAGCAAGCACTCATCAATGGAATTAATGTAGAATaGGAGACATCAAGGAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: TGDAICSTSSTFEQALINGINVE*ETSRKA Trigger: AGCCTTCCTTGATGTCTCCAATTCTACATTAATTCC...ATTGATGAGTGCTTGCTCAAAGGTCGATGATGTGCTACAGATGGCATCACCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS CCA 72 bp | GAGGGGAGCGCCCAGGGAGCTCGAGCTGAAGGAGCCTaGCGGAGACTCCGCGGGACCCCAGCTTACTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: EGSAQGARAEGA*RRLRGTPAYSL Trigger: CAACGAGTAAGCTGGGGTCCCGCGGAGTCTCCGCCAGGCTCCTTCAGCTCGAGCTCCCTGGGCGCTCCCCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000464277.2 ENST00000494490.2 |
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| CDS CCA 72 bp | CGTTCAATCCGAGCTATCCTCGCAGGCATACGTGCCTaGCCAGGAAGAGGCACGGCTCTGCCGCAGCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: RSIRAILAGIRA*PGRGTALPQQA Trigger: GGCTTGCTGCGGCAGAGCCGTGCCTCTTCCTGGCCAGGCACGTATGCCTGCGAGGATAGCTCGGATTGAACG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464308.1 |
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| CDS GCA 72 bp | CCCGCTTTTACTACCACGGGTGTCCTTAGCTGCGGCTaGCAAGCTGAGCAAGTTCATGGAACTGCGGTACTG | + |
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Preference number: 6 (lower is better) Translates to: PAFTTTGVLSCG*QAEQVHGTAVL Trigger: CAGTACCGCAGTTCCATGAACTTGCTCAGCTTGGCAGCCGCAGCTAAGGACACCCGTGGTAGTAAAAGCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482852.5 |
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| CDS TCA 72 bp | CTCTCCAGGCCAGGCCACTTAAACATTTGCCGGGACTaGCTCAAGTCCAAACAACGAGGAAGGCATCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: LSRPGHLNICRD*LKSKQRGRHLF Trigger: GAACAGATGCCTTCCTCGTTGTTTGGACTTGAGTCAGTCCCGGCAAATGTTTAAGTGGCCTGGCCTGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562260.1 |
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| CDS CAA 90 bp | CCTTCTAGCACTCTCTTAGCTCTCCAGGCCAGGCCACTTAAACATTaGCCGGGACTGACTCAAGTCCAAACAACGAGGAAGGCATCTGTT | + |
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Preference number: 6 (lower is better) Translates to: PSSTLLALQARPLKH*PGLTQVQTTRKASV Trigger: AACAGATGCCTTCCTCGTTGTTTGGACTTGAGTCAGTCCCGGCAAATGTTTAAGTGGCCTGGCCTGGAGAGCTAAGAGAGTGCTAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562260.1 |
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| CDS CAA 72 bp | ACTCTCTTAGCTCTCCAGGCCAGGCCACTTAAACATTaGCCGGGACTGACTCAAGTCCAAACAACGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: TLLALQARPLKH*PGLTQVQTTRK Trigger: CTTCCTCGTTGTTTGGACTTGAGTCAGTCCCGGCAAATGTTTAAGTGGCCTGGCCTGGAGAGCTAAGAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562260.1 |
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| CDS TCA 72 bp | CAGAGAAGAGAACATTGCTGTTCATCTTGTTGTGAGTaGCAGGAGACTGAACCAACATGGCGGCAGTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: QRREHCCSSCCE*QETEPTWRQWE Trigger: TTCCCACTGCCGCCATGTTGGTTCAGTCTCCTGTCACTCACAACAAGATGAACAGCAATGTTCTCTTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562260.1 |
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