Pregenerated sensors for POLR2J (Homo sapiens)
Ensembl gene IDs: ENSG00000005075Ensembl transcript IDs: ENST00000292614.9
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCGGGCCATGGCTGGGACCGGCCGCTCTCCTCGGTGTGGTACCTaGAGCGGAGGGTCAGGCACAGGTAGGAACGGGGCTCACAGGCCG | + |
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Preference number: 1 (lower is better) Translates to: RRAMAGTGRSPRCGT*SGGSGTGRNGAHRP Trigger: CGGCCTGTGAGCCCCGTTCCTACCTGTGCCTGACCCTCCGCTCCAGGTACCACACCGAGGAGAGCGGCCGGTCCCAGCCATGGCCCGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR CCA 90 bp | AGGACACGTCGGTGTCAGGGTGAGGGGTGGCCACAAGGCGGGCCATaGCTGGGACCGGCCGCTCTCCTCGGTGTGGTACCTGGAGCGGAG | + |
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Preference number: 1 (lower is better) Translates to: RTRRCQGEGWPQGGP*LGPAALLGVVPGAE Trigger: CTCCGCTCCAGGTACCACACCGAGGAGAGCGGCCGGTCCCAGCCATGGCCCGCCTTGTGGCCACCCCTCACCCTGACACCGACGTGTCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR GCA 90 bp | GGAGTTGAGGCTTCTAGAGCAGAGACTCTTGGGAGCTCATGGGTTTaGACACTTCTCTCCGGCTCAGCACAGCCCCCGCAGCAGCCCCTG | + |
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Preference number: 1 (lower is better) Translates to: GVEASRAETLGSSWV*TLLSGSAQPPQQPL Trigger: CAGGGGCTGCTGCGGGGGCTGTGCTGAGCCGGAGAGAAGTGTGCAAACCCATGAGCTCCCAAGAGTCTCTGCTCTAGAAGCCTCAACTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR CCA 90 bp | GGCCCAGGAGTTGAGGCTTCTAGAGCAGAGACTCTTGGGAGCTCATaGGTTTGCACACTTCTCTCCGGCTCAGCACAGCCCCCGCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: GPGVEASRAETLGSS*VCTLLSGSAQPPQQ Trigger: CTGCTGCGGGGGCTGTGCTGAGCCGGAGAGAAGTGTGCAAACCCATGAGCTCCCAAGAGTCTCTGCTCTAGAAGCCTCAACTCCTGGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR TCA 90 bp | GCCAGCCGGACGCCCCTGAAACAGGTCATCTGCCTGCATCAAGCCTaGCAATCCATTTGCTTGCGAAGTCACCGCTGCTCAAGTCCACAT | + |
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Preference number: 1 (lower is better) Translates to: ASRTPLKQVICLHQA*QSICLRSHRCSSPH Trigger: ATGTGGACTTGAGCAGCGGTGACTTCGCAAGCAAATGGATTGTCAGGCTTGATGCAGGCAGATGACCTGTTTCAGGGGCGTCCGGCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR TCA 90 bp | GATCTTTGGTCCAGAATGAATTCATCCCTGCCAGCCGGACGCCCCTaGAACAGGTCATCTGCCTGCATCAAGCCTGACAATCCATTTGCT | + |
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Preference number: 1 (lower is better) Translates to: DLWSRMNSSLPAGRP*NRSSACIKPDNPFA Trigger: AGCAAATGGATTGTCAGGCTTGATGCAGGCAGATGACCTGTTTCAGGGGCGTCCGGCTGGCAGGGATGAATTCATTCTGGACCAAAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR TCA 90 bp | GAAAGGTGTTTCGAGTTATGCAGGAAGAAGTGTTCCTGCTTTGACTaGCAGGCAGGCCCAGGAGTTGAGGCTTCTAGAGCAGAGACTCTT | + |
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Preference number: 1 (lower is better) Translates to: ERCFELCRKKCSCFD*QAGPGVEASRAETL Trigger: AAGAGTCTCTGCTCTAGAAGCCTCAACTCCTGGGCCTGCCTGTCAGTCAAAGCAGGAACACTTCTTCCTGCATAACTCGAAACACCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR-3UTR CCA 90 bp | CAGAATGAATTCATCCCTGCCAGCCGGACGCCCCTGAAACAGGTCATCTGCCTGCCACAAGGCGGGCCATaGCTGGGACCGGCCGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: QNEFIPASRTPLKQVICLPQGGP*LGPAAL Trigger: GAGAGCGGCCGGTCCCAGCCATGGCCCGCCTTGTGG...CAGGCAGATGACCTGTTTCAGGGGCGTCCGGCTGGCAGGGATGAATTCATTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR-3UTR TCA 90 bp | TTGACTGACAGGCAGGCCCAGGAGTTGAGGCTTCTAGAGCAGAGACTCTTGGGAACGTCGGTGTCAGGGTaGGGGGTGGCCACAAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: LTDRQAQELRLLEQRLLGTSVSG*GVATRR Trigger: CCGCCTTGTGGCCACCCCTCACCCTGACACCGACGT...TCCCAAGAGTCTCTGCTCTAGAAGCCTCAACTCCTGGGCCTGCCTGTCAGTCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR CAA 90 bp | ACTGACAGGCAGGCCCAGGAGTTGAGGCTTCTAGAGCAGAGACTCTaGGGAGCTCATGGGTTTGCACACTTCTCTCCGGCTCAGCACAGC | + |
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Preference number: 2 (lower is better) Translates to: TDRQAQELRLLEQRL*GAHGFAHFSPAQHS Trigger: GCTGTGCTGAGCCGGAGAGAAGTGTGCAAACCCATGAGCTCCCAAGAGTCTCTGCTCTAGAAGCCTCAACTCCTGGGCCTGCCTGTCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR-3UTR CCA 90 bp | GACAATCCATTTGCTTGCGAAGTCACCGCTGCTCAAGTCCACATCCAGGTCTCTTGTCAGGGTGAGGGGTaGCCACAAGGCGGGCCATGG | + |
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Preference number: 2 (lower is better) Translates to: DNPFACEVTAAQVHIQVSCQGEG*PQGGPW Trigger: CCATGGCCCGCCTTGTGGCCACCCCTCACCCTGACA...AGAGACCTGGATGTGGACTTGAGCAGCGGTGACTTCGCAAGCAAATGGATTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGACTCTTGGGAGCTCATGGGTTTGCACACTTCTCTCCGGCTCAGCACAGCCTTGCGAAGTCACCGCTaGTCAAGTCCACATCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: RDSWELMGLHTSLRLSTALRSHR*SSPHPG Trigger: ACCTGGATGTGGACTTGAGCAGCGGTGACTTCGCAA...GGCTGTGCTGAGCCGGAGAGAAGTGTGCAAACCCATGAGCTCCCAAGAGTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR CAA 90 bp | GCCCCTGAAACAGGTCATCTGCCTGCATCAAGCCTGACAATCCATTaGCTTGCGAAGTCACCGCTGCTCAAGTCCACATCCAGGTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: APETGHLPASSLTIH*LAKSPLLKSTSRSL Trigger: GAGAGACCTGGATGTGGACTTGAGCAGCGGTGACTTCGCAAGCAAATGGATTGTCAGGCTTGATGCAGGCAGATGACCTGTTTCAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR CAA 90 bp | GCAGGAAGAAGTGTTCCTGCTTTGACTGACAGGCAGGCCCAGGAGTaGAGGCTTCTAGAGCAGAGACTCTTGGGAGCTCATGGGTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: AGRSVPALTDRQAQE*RLLEQRLLGAHGFA Trigger: TGCAAACCCATGAGCTCCCAAGAGTCTCTGCTCTAGAAGCCTCAACTCCTGGGCCTGCCTGTCAGTCAAAGCAGGAACACTTCTTCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGAGACTCTTGGGAGCTCATGGGTTTGCACACTTCTCTCCGGCTCAGCACATCTTTGGTCCAGAATaGATTCATCCCTGCCAGCCG | + |
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Preference number: 2 (lower is better) Translates to: EQRLLGAHGFAHFSPAQHIFGPE*IHPCQP Trigger: CGGCTGGCAGGGATGAATTCATTCTGGACCAAAGAT...GTGCTGAGCCGGAGAGAAGTGTGCAAACCCATGAGCTCCCAAGAGTCTCTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR-3UTR GCA 90 bp | TTGACTGACAGGCAGGCCCAGGAGTTGAGGCTTCTAGAGCAGAGACTCTTGGGAGACAATCCATTTGCTTaGGAAGTCACCGCTGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: LTDRQAQELRLLEQRLLGDNPFA*EVTAAQ Trigger: TTGAGCAGCGGTGACTTCGCAAGCAAATGGATTGTC...TCCCAAGAGTCTCTGCTCTAGAAGCCTCAACTCCTGGGCCTGCCTGTCAGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR-3UTR TCA 90 bp | AGTTATGCAGGAAGAAGTGTTCCTGCTTTGACTGACAGGCAGGCCCAGGAGTTGTGCCTGCATCAAGCCTaGCAATCCATTTGCTTGCGA | + |
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Preference number: 2 (lower is better) Translates to: SYAGRSVPALTDRQAQELCLHQA*QSICLR Trigger: TCGCAAGCAAATGGATTGTCAGGCTTGATGCAGGCA...CAACTCCTGGGCCTGCCTGTCAGTCAAAGCAGGAACACTTCTTCCTGCATAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR CCA 72 bp | ATGGCTGGGACCGGCCGCTCTCCTCGGTGTGGTACCTaGAGCGGAGGGTCAGGCACAGGTAGGAACGGGGCT | + |
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Preference number: 3 (lower is better) Translates to: MAGTGRSPRCGT*SGGSGTGRNGA Trigger: AGCCCCGTTCCTACCTGTGCCTGACCCTCCGCTCCAGGTACCACACCGAGGAGAGCGGCCGGTCCCAGCCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR TCA 72 bp | AACCTAATCTATGTACAGGACACGTCGGTGTCAGGGTaGGGGGTGGCCACAAGGCGGGCCATGGCTGGGACC | + |
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Preference number: 3 (lower is better) Translates to: NLIYVQDTSVSG*GVATRRAMAGT Trigger: GGTCCCAGCCATGGCCCGCCTTGTGGCCACCCCTCACCCTGACACCGACGTGTCCTGTACATAGATTAGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR CCA 72 bp | GTTGAGGCTTCTAGAGCAGAGACTCTTGGGAGCTCATaGGTTTGCACACTTCTCTCCGGCTCAGCACAGCCC | + |
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Preference number: 3 (lower is better) Translates to: VEASRAETLGSS*VCTLLSGSAQP Trigger: GGGCTGTGCTGAGCCGGAGAGAAGTGTGCAAACCCATGAGCTCCCAAGAGTCTCTGCTCTAGAAGCCTCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR TCA 72 bp | ACGCCCCTGAAACAGGTCATCTGCCTGCATCAAGCCTaGCAATCCATTTGCTTGCGAAGTCACCGCTGCTCA | + |
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Preference number: 3 (lower is better) Translates to: TPLKQVICLHQA*QSICLRSHRCS Trigger: TGAGCAGCGGTGACTTCGCAAGCAAATGGATTGTCAGGCTTGATGCAGGCAGATGACCTGTTTCAGGGGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR TCA 72 bp | TCCAGAATGAATTCATCCCTGCCAGCCGGACGCCCCTaGAACAGGTCATCTGCCTGCATCAAGCCTGACAAT | + |
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Preference number: 3 (lower is better) Translates to: SRMNSSLPAGRP*NRSSACIKPDN Trigger: ATTGTCAGGCTTGATGCAGGCAGATGACCTGTTTCAGGGGCGTCCGGCTGGCAGGGATGAATTCATTCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR GCA 72 bp | TCATCTGCCTGCATCAAGCCTGACAATCCATTTGCTTaGGAAGTCACCGCTGCTCAAGTCCACATCCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: SSACIKPDNPFA*EVTAAQVHIQV Trigger: GACCTGGATGTGGACTTGAGCAGCGGTGACTTCGCAAGCAAATGGATTGTCAGGCTTGATGCAGGCAGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR TCA 72 bp | TTCGAGTTATGCAGGAAGAAGTGTTCCTGCTTTGACTaGCAGGCAGGCCCAGGAGTTGAGGCTTCTAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: FELCRKKCSCFD*QAGPGVEASRA Trigger: TGCTCTAGAAGCCTCAACTCCTGGGCCTGCCTGTCAGTCAAAGCAGGAACACTTCTTCCTGCATAACTCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR CCA 90 bp | GGGCCATGGCTGGGACCGGCCGCTCTCCTCGGTGTGGTACCTGGAGCGGAGGGTTGTCAGGGTGAGGGGTaGCCACAAGGCGGGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: GPWLGPAALLGVVPGAEGCQGEG*PQGGPW Trigger: CCATGGCCCGCCTTGTGGCCACCCCTCACCCTGACA...ACCCTCCGCTCCAGGTACCACACCGAGGAGAGCGGCCGGTCCCAGCCATGGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR TCA 90 bp | ATGGCTGGGACCGGCCGCTCTCCTCGGTGTGGTACCTGGAGCGGAGGGTCAGGCCCAGCCGGACGCCCCTaGAACAGGTCATCTGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: MAGTGRSPRCGTWSGGSGPAGRP*NRSSAC Trigger: GCAGGCAGATGACCTGTTTCAGGGGCGTCCGGCTGG...GCCTGACCCTCCGCTCCAGGTACCACACCGAGGAGAGCGGCCGGTCCCAGCCAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR TCA 90 bp | GGGCCATGGCTGGGACCGGCCGCTCTCCTCGGTGTGGTACCTGGAGCGGAGGGTGAAGTGTTCCTGCTTTaGCTGACAGGCAGGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GPWLGPAALLGVVPGAEGEVFLL*LTGRPR Trigger: CCTGGGCCTGCCTGTCAGTCAAAGCAGGAACACTTC...ACCCTCCGCTCCAGGTACCACACCGAGGAGAGCGGCCGGTCCCAGCCATGGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR TCA 90 bp | GGGCCATGGCTGGGACCGGCCGCTCTCCTCGGTGTGGTACCTGGAGCGGAGGGTTGTTCCTGCTTTGACTaGCAGGCAGGCCCAGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: GPWLGPAALLGVVPGAEGCSCFD*QAGPGV Trigger: AACTCCTGGGCCTGCCTGTCAGTCAAAGCAGGAACA...ACCCTCCGCTCCAGGTACCACACCGAGGAGAGCGGCCGGTCCCAGCCATGGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR TCA 90 bp | ATTCATCCCTGCCAGCCGGACGCCCCTGAAACAGGTCATCTGCCTGCATCAAGCACGTCGGTGTCAGGGTaGGGGGTGGCCACAAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: IHPCQPDAPETGHLPASSTSVSG*GVATRR Trigger: CCGCCTTGTGGCCACCCCTCACCCTGACACCGACGT...GCTTGATGCAGGCAGATGACCTGTTTCAGGGGCGTCCGGCTGGCAGGGATGAAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR GCA 90 bp | TGGCCACAAGGCGGGCCATGGCTGGGACCGGCCGCTCTCCTCGGTGTGGTACCTTTGCGAAGTCACCGCTaGTCAAGTCCACATCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: WPQGGPWLGPAALLGVVPLRSHR*SSPHPG Trigger: ACCTGGATGTGGACTTGAGCAGCGGTGACTTCGCAA...AGGTACCACACCGAGGAGAGCGGCCGGTCCCAGCCATGGCCCGCCTTGTGGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR GCA 90 bp | GCCACAAGGCGGGCCATGGCTGGGACCGGCCGCTCTCCTCGGTGTGGTACCTGGTACTCAATTCCTTCCTaGTTGTCTTTTATGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: ATRRAMAGTGRSPRCGTWYSIPS*LSFMAT Trigger: GGTGGCCATAAAAGACAAGCAGGAAGGAATTGAGTA...CCAGGTACCACACCGAGGAGAGCGGCCGGTCCCAGCCATGGCCCGCCTTGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR GCA 90 bp | ATGGCTGGGACCGGCCGCTCTCCTCGGTGTGGTACCTGGAGCGGAGGGTCAGGCAGGTGTTTCGAGTTATaGAGGAAGAAGTGTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: MAGTGRSPRCGTWSGGSGRCFEL*RKKCSC Trigger: GCAGGAACACTTCTTCCTGCATAACTCGAAACACCT...GCCTGACCCTCCGCTCCAGGTACCACACCGAGGAGAGCGGCCGGTCCCAGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR CCA 90 bp | TCTGCCTGCATCAAGCCTGACAATCCATTTGCTTGCGAAGTCACCGCTGCTCAAAAGGCGGGCCATGGCTaGGACCGGCCGCTCTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: SACIKPDNPFACEVTAAQKAGHG*DRPLSS Trigger: CGAGGAGAGCGGCCGGTCCCAGCCATGGCCCGCCTT...TTGAGCAGCGGTGACTTCGCAAGCAAATGGATTGTCAGGCTTGATGCAGGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR CCA 90 bp | AACAGGTCATCTGCCTGCATCAAGCCTGACAATCCATTTGCTTGCGAAGTCACCCCACAAGGCGGGCCATaGCTGGGACCGGCCGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: NRSSACIKPDNPFACEVTPQGGP*LGPAAL Trigger: GAGAGCGGCCGGTCCCAGCCATGGCCCGCCTTGTGG...GGTGACTTCGCAAGCAAATGGATTGTCAGGCTTGATGCAGGCAGATGACCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR GCA 90 bp | AGACTCTTGGGAGCTCATGGGTTTGCACACTTCTCTCCGGCTCAGCACAGCCCCGGGAGCTCATGGGTTTaGACACTTCTCTCCGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RLLGAHGFAHFSPAQHSPGSSWV*TLLSGS Trigger: TGAGCCGGAGAGAAGTGTGCAAACCCATGAGCTCCC...GGGGCTGTGCTGAGCCGGAGAGAAGTGTGCAAACCCATGAGCTCCCAAGAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR TCA 90 bp | CAGAATGAATTCATCCCTGCCAGCCGGACGCCCCTGAAACAGGTCATCTGCCTGATCTTTGGTCCAGAATaGATTCATCCCTGCCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: QNEFIPASRTPLKQVICLIFGPE*IHPCQP Trigger: CGGCTGGCAGGGATGAATTCATTCTGGACCAAAGAT...CAGGCAGATGACCTGTTTCAGGGGCGTCCGGCTGGCAGGGATGAATTCATTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR GCA 90 bp | AGACTCTTGGGAGCTCATGGGTTTGCACACTTCTCTCCGGCTCAGCACAGCCCCGACAATCCATTTGCTTaGGAAGTCACCGCTGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: RLLGAHGFAHFSPAQHSPDNPFA*EVTAAQ Trigger: TTGAGCAGCGGTGACTTCGCAAGCAAATGGATTGTC...GGGGCTGTGCTGAGCCGGAGAGAAGTGTGCAAACCCATGAGCTCCCAAGAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR CCA 90 bp | AGACTCTTGGGAGCTCATGGGTTTGCACACTTCTCTCCGGCTCAGCACAGCCCCTGGACCCCGGATCTTTaGTCCAGAATGAATTCATCC | + |
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Preference number: 4 (lower is better) Translates to: RLLGAHGFAHFSPAQHSPWTPDL*SRMNSS Trigger: GGATGAATTCATTCTGGACCAAAGATCCGGGGTCCA...GGGGCTGTGCTGAGCCGGAGAGAAGTGTGCAAACCCATGAGCTCCCAAGAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR CCA 90 bp | CAGAATGAATTCATCCCTGCCAGCCGGACGCCCCTGAAACAGGTCATCTGCCTGACTCTTGGGAGCTCATaGGTTTGCACACTTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: QNEFIPASRTPLKQVICLTLGSS*VCTLLS Trigger: GGAGAGAAGTGTGCAAACCCATGAGCTCCCAAGAGT...CAGGCAGATGACCTGTTTCAGGGGCGTCCGGCTGGCAGGGATGAATTCATTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| 3UTR CAA 72 bp | ACAGGTCATCTGCCTGCATCAAGCCTGACAATCCATTaGCTTGCGAAGTCACCGCTGCTCAAGTCCACATCC | + |
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Preference number: 4 (lower is better) Translates to: TGHLPASSLTIH*LAKSPLLKSTS Trigger: GGATGTGGACTTGAGCAGCGGTGACTTCGCAAGCAAATGGATTGTCAGGCTTGATGCAGGCAGATGACCTGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR CCA 90 bp | AGTTATGCAGGAAGAAGTGTTCCTGCTTTGACTGACAGGCAGGCCCAGGAGTTGCCTGCTTGTCTTTTATaGCCACCCGAAAGCGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SYAGRSVPALTDRQAQELPACLL*PPESAP Trigger: AGGAGCGCTTTCGGGTGGCCATAAAAGACAAGCAGG...CAACTCCTGGGCCTGCCTGTCAGTCAAAGCAGGAACACTTCTTCCTGCATAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR CCA 90 bp | CTCAAGTCCACATCCAGGTCTCTCCCGCTATACTTTATTAGGAATATAAAACCTCCGCTCTCCTCGGTGTaGTACCTGGAGCGGAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LKSTSRSLPLYFIRNIKPPLSSV*YLERRV Trigger: GACCCTCCGCTCCAGGTACCACACCGAGGAGAGCGG...AGGTTTTATATTCCTAATAAAGTATAGCGGGAGAGACCTGGATGTGGACTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR CCA 90 bp | CAGAATGAATTCATCCCTGCCAGCCGGACGCCCCTGAAACAGGTCATCTGCCTGTGGACAAGAAGCCTGTaGAAAGGTGTTTCGAGTTAT | + |
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Preference number: 4 (lower is better) Translates to: QNEFIPASRTPLKQVICLWTRSL*KGVSSY Trigger: ATAACTCGAAACACCTTTCCACAGGCTTCTTGTCCA...CAGGCAGATGACCTGTTTCAGGGGCGTCCGGCTGGCAGGGATGAATTCATTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR GCA 90 bp | CTGACAATCCATTTGCTTGCGAAGTCACCGCTGCTCAAGTCCACATCCAGGTCTAACAGGTCATCTGCCTaGATCAAGCCTGACAATCCA | + |
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Preference number: 4 (lower is better) Translates to: LTIHLLAKSPLLKSTSRSNRSSA*IKPDNP Trigger: TGGATTGTCAGGCTTGATGCAGGCAGATGACCTGTT...AGACCTGGATGTGGACTTGAGCAGCGGTGACTTCGCAAGCAAATGGATTGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR CCA 90 bp | CTCAAGTCCACATCCAGGTCTCTCCCGCTATACTTTATTAGGAATATAAAACCTCCTCGGTGTGGTACCTaGAGCGGAGGGTCAGGCACA | + |
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Preference number: 4 (lower is better) Translates to: LKSTSRSLPLYFIRNIKPPRCGT*SGGSGT Trigger: TGTGCCTGACCCTCCGCTCCAGGTACCACACCGAGG...AGGTTTTATATTCCTAATAAAGTATAGCGGGAGAGACCTGGATGTGGACTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR TCA 90 bp | GAAACAGGTCATCTGCCTGCATCAAGCCTGACAATCCATTTGCTTGCGAAGTCATGCCTGCATCAAGCCTaGCAATCCATTTGCTTGCGA | + |
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Preference number: 4 (lower is better) Translates to: ETGHLPASSLTIHLLAKSCLHQA*QSICLR Trigger: TCGCAAGCAAATGGATTGTCAGGCTTGATGCAGGCA...TGACTTCGCAAGCAAATGGATTGTCAGGCTTGATGCAGGCAGATGACCTGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR CAA 90 bp | ATGGCTGGGACCGGCCGCTCTCCTCGGTGTGGTACCTGGAGCGGAGGGTCAGGCTGGGAGCTCATGGGTTaGCACACTTCTCTCCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: MAGTGRSPRCGTWSGGSGWELMG*HTSLRL Trigger: GAGCCGGAGAGAAGTGTGCAAACCCATGAGCTCCCA...GCCTGACCCTCCGCTCCAGGTACCACACCGAGGAGAGCGGCCGGTCCCAGCCAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR CAA 90 bp | GGGCCATGGCTGGGACCGGCCGCTCTCCTCGGTGTGGTACCTGGAGCGGAGGGTCTAGAGCAGAGACTCTaGGGAGCTCATGGGTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: GPWLGPAALLGVVPGAEGLEQRL*GAHGFA Trigger: TGCAAACCCATGAGCTCCCAAGAGTCTCTGCTCTAG...ACCCTCCGCTCCAGGTACCACACCGAGGAGAGCGGCCGGTCCCAGCCATGGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR CAA 90 bp | ATGGCTGGGACCGGCCGCTCTCCTCGGTGTGGTACCTGGAGCGGAGGGTCAGGCTCAATTCCTTCCTGCTaGTCTTTTATGGCCACCCGA | + |
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Preference number: 5 (lower is better) Translates to: MAGTGRSPRCGTWSGGSGSIPSC*SFMATR Trigger: TCGGGTGGCCATAAAAGACAAGCAGGAAGGAATTGA...GCCTGACCCTCCGCTCCAGGTACCACACCGAGGAGAGCGGCCGGTCCCAGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR CAA 90 bp | AGACTCTTGGGAGCTCATGGGTTTGCACACTTCTCTCCGGCTCAGCACAGCCCCCTGGACCCCGGATCTTaGGTCCAGAATGAATTCATC | + |
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Preference number: 5 (lower is better) Translates to: RLLGAHGFAHFSPAQHSPLDPGS*VQNEFI Trigger: GATGAATTCATTCTGGACCAAAGATCCGGGGTCCAG...GGGGCTGTGCTGAGCCGGAGAGAAGTGTGCAAACCCATGAGCTCCCAAGAGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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| CDS-3UTR CAA 90 bp | CCTGCATCAAGCCTGACAATCCATTTGCTTGCGAAGTCACCGCTGCTCAAGTCCAGAAGTGTTCCTGCTTaGACTGACAGGCAGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: PASSLTIHLLAKSPLLKSRSVPA*TDRQAQ Trigger: CTGGGCCTGCCTGTCAGTCAAAGCAGGAACACTTCT...GGACTTGAGCAGCGGTGACTTCGCAAGCAAATGGATTGTCAGGCTTGATGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000292614.9 |
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