Pregenerated sensors for POLR2I (Homo sapiens)
Ensembl gene IDs: ENSG00000105258Ensembl transcript IDs: ENST00000221859.9, ENST00000585842.5, ENST00000586439.1, ENST00000586789.5, ENST00000589069.1, ENST00000589591.5, ENST00000592962.5
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTaGGGCTGTGCACACGTAGTAAAGGCGCATGGCGTCCTCGGCCCG | + |
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Preference number: 1 (lower is better) Translates to: LGGERRSLGPAVAAV*GCAHVVKAHGVLGP Trigger: CGGGCCGAGGACGCCATGCGCCTTTACTACGTGTGCACAGCCCCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| 3UTR GCA 90 bp | AGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTaGACACGTAGTAAAGGCGCATGGCGTCCTCGGCCCGCGCACTGT | + |
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Preference number: 1 (lower is better) Translates to: REEVTRSSGGRSVGL*TRSKGAWRPRPAHC Trigger: ACAGTGCGCGGGCCGAGGACGCCATGCGCCTTTACTACGTGTGCACAGCCCCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| 3UTR-3UTR CCA 90 bp | ACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGCGGTCCGCGGCAACGTaGGGTCCTGGGACACGTCGG | + |
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Preference number: 2 (lower is better) Translates to: TRGREEVTRSSGGRSVGLRSAAT*GPGTRR Trigger: CCGACGTGTCCCAGGACCCCACGTTGCCGCGGACCG...CAGCCCCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
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| 3UTR-3UTR TCA 90 bp | TCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTGGGCCCGCGCACTGTGTaGCTGGAAGAACACAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: SGERGGHSVQRWPQCGAVGPRTV*LEEHSL Trigger: GAGGCTGTGTTCTTCCAGTCACACAGTGCGCGGGCC...CACAGCCCCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| 3UTR-3UTR CCA 90 bp | TGTTTATTACACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGCGGTCCGCGGCAACGTaGGGTCCTGGGACACGTCGG | + |
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Preference number: 2 (lower is better) Translates to: CLLHSGERGGHSVQRWPQRSAAT*GPGTRR Trigger: CCGACGTGTCCCAGGACCCCACGTTGCCGCGGACCG...CTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGTGTAATAAACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
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| 3UTR-3UTR CCA 90 bp | GAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTGCACACGTTGTGGCCGCACTTTTaGCACGGGTGGTCCTCGGTC | + |
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Preference number: 2 (lower is better) Translates to: ERGGHSVQRWPQCGAVHTLWPHF*HGWSSV Trigger: GACCGAGGACCACCCGTGCCAAAAGTGCGGCCACAA...CGTGTGCACAGCCCCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
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| 3UTR-3UTR CCA 90 bp | GAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTGCACACGTAGGCAACGTGGGGTCCTaGGACACGTCGGCGATAATC | + |
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Preference number: 2 (lower is better) Translates to: ERRSLGPAVAAVWGCAHVGNVGS*DTSAII Trigger: GATTATCGCCGACGTGTCCCAGGACCCCACGTTGCC...TACGTGTGCACAGCCCCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
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| 3UTR-3UTR CCA 90 bp | TTTATTACACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGAACACAGCCTCCTTGTaGCCGCACCTCCCCAGTACC | + |
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Preference number: 2 (lower is better) Translates to: FITLGGERRSLGPAVAAVNTASL*PHLPST Trigger: GGTACTGGGGAGGTGCGGCCACAAGGAGGCTGTGTT...CACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGTGTAATAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592962.5 |
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| 3UTR-3UTR CCA 90 bp | AGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTGCACACGTAGTAAAGCGCGCACTGTGTGACTaGAAGAACACAGCCTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: RSLGPAVAAVWGCAHVVKRALCD*KNTASL Trigger: CAAGGAGGCTGTGTTCTTCCAGTCACACAGTGCGCG...CTTTACTACGTGTGCACAGCCCCACACTGCGGCCACCGCTGGACCGAGTGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| 3UTR GCA 72 bp | GTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTaGACACGTAGTAAAGGCGCATGGCGTCCTCGGCCC | + |
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Preference number: 3 (lower is better) Translates to: VTRSSGGRSVGL*TRSKGAWRPRP Trigger: GGGCCGAGGACGCCATGCGCCTTTACTACGTGTGCACAGCCCCACACTGCGGCCACCGCTGGACCGAGTGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| 3UTR CCA 72 bp | AGGCGCATGGCGTCCTCGGCCCGCGCACTGTGTGACTaGAAGAACACAGCCTCCTTGTGGCCGCACCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: RRMASSARALCD*KNTASLWPHLP Trigger: GGGGAGGTGCGGCCACAAGGAGGCTGTGTTCTTCCAGTCACACAGTGCGCGGGCCGAGGACGCCATGCGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592962.5 |
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| 3UTR CCA 72 bp | AACACAGCCTCCTTGTGGCCGCACTTTTGGCACGGGTaGTCCTCGGTCCGCGGCAACGTGGGGTCCTGGGAC | + |
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Preference number: 3 (lower is better) Translates to: NTASLWPHFWHG*SSVRGNVGSWD Trigger: GTCCCAGGACCCCACGTTGCCGCGGACCGAGGACCACCCGTGCCAAAAGTGCGGCCACAAGGAGGCTGTGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
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| 3UTR-3UTR CAA 90 bp | AGTGTGGGGCTGTGCACACGTAGTAAAGGCGCATGGCGTCCTCGGCCCGCGCACCTTGTGGCCGCACTTTaGGCACGGGTGGTCCTCGGT | + |
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Preference number: 3 (lower is better) Translates to: SVGLCTRSKGAWRPRPAHLVAAL*ARVVLG Trigger: ACCGAGGACCACCCGTGCCAAAAGTGCGGCCACAAG...GTGCGCGGGCCGAGGACGCCATGCGCCTTTACTACGTGTGCACAGCCCCACACT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
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| 3UTR-3UTR CAA 90 bp | CGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTGCAAGAACACAGCCTCCTaGTGGCCGCACTTTTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: RGREEVTRSSGGRSVGLCKNTAS*WPHFWH Trigger: GTGCCAAAAGTGCGGCCACAAGGAGGCTGTGTTCTT...GCACAGCCCCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
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| 3UTR CCA 72 bp | GAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTaGGGCTGTGCACACGTAGTAAAGGCGCATGGCGTC | + |
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Preference number: 3 (lower is better) Translates to: ERRSLGPAVAAV*GCAHVVKAHGV Trigger: GACGCCATGCGCCTTTACTACGTGTGCACAGCCCCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| 3UTR-3UTR CAA 90 bp | TTACACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGAAGAACACAGCCTCCTaGTGGCCGCACCTCCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: LHSGERGGHSVQRWPQCGKNTAS*WPHLPS Trigger: ACTGGGGAGGTGCGGCCACAAGGAGGCTGTGTTCTT...CCCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGTGTAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592962.5 |
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| 3UTR TCA 72 bp | GTAAAGGCGCATGGCGTCCTCGGCCCGCGCACTGTGTaGCTGGAAGAACACAGCCTCCTTGTGGCCGCACCT | + |
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Preference number: 3 (lower is better) Translates to: VKAHGVLGPRTV*LEEHSLLVAAP Trigger: AGGTGCGGCCACAAGGAGGCTGTGTTCTTCCAGTCACACAGTGCGCGGGCCGAGGACGCCATGCGCCTTTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000592962.5 |
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| 3UTR CCA 72 bp | AGGCGCATGGCGTCCTCGGCCCGCGCACTGTGTGACTaGAAGAACACAGCCTCCTTGTGGCCGCACTTTTGG | + |
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Preference number: 3 (lower is better) Translates to: RRMASSARALCD*KNTASLWPHFW Trigger: CCAAAAGTGCGGCCACAAGGAGGCTGTGTTCTTCCAGTCACACAGTGCGCGGGCCGAGGACGCCATGCGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
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| 3UTR TCA 72 bp | GTAAAGGCGCATGGCGTCCTCGGCCCGCGCACTGTGTaGCTGGAAGAACACAGCCTCCTTGTGGCCGCACTT | + |
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Preference number: 3 (lower is better) Translates to: VKAHGVLGPRTV*LEEHSLLVAAL Trigger: AAGTGCGGCCACAAGGAGGCTGTGTTCTTCCAGTCACACAGTGCGCGGGCCGAGGACGCCATGCGCCTTTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
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| CDS-3UTR GCA 90 bp | TACACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGGGAGCTGCGCACACGTaGTGGCTCCCCGCCGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: YTRGREEVTRSSGGRSVGGAAHT*WLPAAS Trigger: CGAGGCGGCGGGGAGCCAGCACGTGTGCGCAGCTCC...CCCCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGTGTA 71% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000586439.1 |
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| CDS-3UTR CCA 90 bp | TCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTGCGGTCCGCGGCAACGTaGGGTCCTGGGACACGTCGG | + |
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Preference number: 4 (lower is better) Translates to: SGERGGHSVQRWPQCGAVRSAAT*GPGTRR Trigger: CCGACGTGTCCCAGGACCCCACGTTGCCGCGGACCG...CACAGCCCCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| CDS-3UTR CCA 90 bp | CGCAGTGTGGGGCTGTGCACACGTAGTAAAGGCGCATGGCGTCCTCGGCCCGCGCGGTCCGCGGCAACGTaGGGTCCTGGGACACGTCGG | + |
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Preference number: 4 (lower is better) Translates to: RSVGLCTRSKGAWRPRPARSAAT*GPGTRR Trigger: CCGACGTGTCCCAGGACCCCACGTTGCCGCGGACCG...CGCGGGCCGAGGACGCCATGCGCCTTTACTACGTGTGCACAGCCCCACACTGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| CDS-3UTR GCA 90 bp | ACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGGGGGCCAGGCCTAGGTaGTTCGCCAAAAGAGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: TRGREEVTRSSGGRSVGLGARPR*FAKRGR Trigger: CCGCCCTCTTTTGGCGAAGCACCTAGGCCTGGCCCC...CAGCCCCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000586439.1 |
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| CDS-3UTR CCA 90 bp | TTACACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGCGGTCCGCGGCAACGTaGGGTCCTGGGACACGTCGG | + |
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Preference number: 4 (lower is better) Translates to: LHSGERGGHSVQRWPQCGRSAAT*GPGTRR Trigger: CCGACGTGTCCCAGGACCCCACGTTGCCGCGGACCG...CCCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGTGTAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| CDS-3UTR CCA 90 bp | GCCGCACTTTTGGCACGGGTGGTCCTCGGTCCGCGGCAACGTGGGGTCCTGGGACGTAGTAAAGGCGCATaGCGTCCTCGGCCCGCGCAC | + |
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Preference number: 4 (lower is better) Translates to: AALLARVVLGPRQRGVLGRSKGA*RPRPAH Trigger: GTGCGCGGGCCGAGGACGCCATGCGCCTTTACTACG...TCCCAGGACCCCACGTTGCCGCGGACCGAGGACCACCCGTGCCAAAAGTGCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
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| CDS-3UTR CCA 90 bp | ATTACACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGTCCCGTCGGGCTCCATaGCGACGCGCAGCCCGCGCA | + |
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Preference number: 4 (lower is better) Translates to: ITLGGERRSLGPAVAAVWSRRAP*RRAARA Trigger: TGCGCGGGCTGCGCGTCGCCATGGAGCCCGACGGGA...CCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGTGTAAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000586439.1 ENST00000592962.5 |
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| CDS-3UTR TCA 90 bp | ACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGGGCCCGCGCACTGTGTaGCTGGAAGAACACAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TRGREEVTRSSGGRSVGLGPRTV*LEEHSL Trigger: GAGGCTGTGTTCTTCCAGTCACACAGTGCGCGGGCC...CAGCCCCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| CDS-3UTR TCA 90 bp | GCACTTTTGGCACGGGTGGTCCTCGGTCCGCGGCAACGTGGGGTCCTGGGACACGGCCCGCGCACTGTGTaGCTGGAAGAACACAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: ALLARVVLGPRQRGVLGHGPRTV*LEEHSL Trigger: GAGGCTGTGTTCTTCCAGTCACACAGTGCGCGGGCC...GTGTCCCAGGACCCCACGTTGCCGCGGACCGAGGACCACCCGTGCCAAAAGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
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| CDS-3UTR GCA 90 bp | ATTACACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGCCAGCCTTCCGCGCTTaGTCCGCCGCGCTACAGGTC | + |
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Preference number: 4 (lower is better) Translates to: ITLGGERRSLGPAVAAVWPAFRA*SAALQV Trigger: GACCTGTAGCGCGGCGGAGCAAGCGCGGAAGGCTGG...CCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGTGTAAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586439.1 |
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| CDS-3UTR CCA 90 bp | TACACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCACTTTTGGCACGGGTaGTCCTCGGTCCGCGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: YTRGREEVTRSSGGRSVGHFWHG*SSVRGN Trigger: GTTGCCGCGGACCGAGGACCACCCGTGCCAAAAGTG...CCCCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGTGTA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| CDS-3UTR CCA 90 bp | GGGCTGTGCACACGTAGTAAAGGCGCATGGCGTCCTCGGCCCGCGCACTGTGTGCGTAGTAAAGGCGCATaGCGTCCTCGGCCCGCGCAC | + |
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Preference number: 4 (lower is better) Translates to: GLCTRSKGAWRPRPAHCVRSKGA*RPRPAH Trigger: GTGCGCGGGCCGAGGACGCCATGCGCCTTTACTACG...CACACAGTGCGCGGGCCGAGGACGCCATGCGCCTTTACTACGTGTGCACAGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| CDS-3UTR TCA 90 bp | GGGCTGTGCACACGTAGTAAAGGCGCATGGCGTCCTCGGCCCGCGCACTGTGTGGGCCCGCGCACTGTGTaGCTGGAAGAACACAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: GLCTRSKGAWRPRPAHCVGPRTV*LEEHSL Trigger: GAGGCTGTGTTCTTCCAGTCACACAGTGCGCGGGCC...CACACAGTGCGCGGGCCGAGGACGCCATGCGCCTTTACTACGTGTGCACAGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| CDS-3UTR CCA 90 bp | GGGCTGTGCACACGTAGTAAAGGCGCATGGCGTCCTCGGCCCGCGCACTGTGTGCACTTTTGGCACGGGTaGTCCTCGGTCCGCGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: GLCTRSKGAWRPRPAHCVHFWHG*SSVRGN Trigger: GTTGCCGCGGACCGAGGACCACCCGTGCCAAAAGTG...CACACAGTGCGCGGGCCGAGGACGCCATGCGCCTTTACTACGTGTGCACAGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| CDS-3UTR CCA 90 bp | CGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTGCCGCGCACTGTGTGACTaGAAGAACACAGCCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: RGREEVTRSSGGRSVGLCRALCD*KNTASL Trigger: CAAGGAGGCTGTGTTCTTCCAGTCACACAGTGCGCG...GCACAGCCCCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| CDS-3UTR CCA 90 bp | TGGCGTCCTCGGCCCGCGCACTGTGTGACTGGAAGAACACAGCCTCCTTGTGGCCACTTTTGGCACGGGTaGTCCTCGGTCCGCGGCAAC | + |
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Preference number: 4 (lower is better) Translates to: WRPRPAHCVTGRTQPPCGHFWHG*SSVRGN Trigger: GTTGCCGCGGACCGAGGACCACCCGTGCCAAAAGTG...GCCACAAGGAGGCTGTGTTCTTCCAGTCACACAGTGCGCGGGCCGAGGACGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| CDS-3UTR CCA 90 bp | TTTTGGCACGGGTGGTCCTCGGTCCGCGGCAACGTGGGGTCCTGGGACACGTCGAACACAGCCTCCTTGTaGCCGCACTTTTGGCACGGG | + |
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Preference number: 4 (lower is better) Translates to: FWHGWSSVRGNVGSWDTSNTASL*PHFWHG Trigger: CCCGTGCCAAAAGTGCGGCCACAAGGAGGCTGTGTT...CGACGTGTCCCAGGACCCCACGTTGCCGCGGACCGAGGACCACCCGTGCCAAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
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| CDS-3UTR CCA 90 bp | ATTACACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGCGGTGGCCGCAGTGTaGGGCTGTGCACACGTAGTA | + |
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Preference number: 4 (lower is better) Translates to: ITLGGERRSLGPAVAAVWAVAAV*GCAHVV Trigger: TACTACGTGTGCACAGCCCCACACTGCGGCCACCGC...CCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGTGTAAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| CDS-3UTR CCA 90 bp | TGTTTATTACACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGCACTCGGTCCAGCGGTaGCCGCAGTGTGGGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: CLLHSGERGGHSVQRWPQHSVQR*PQCGAV Trigger: CACAGCCCCACACTGCGGCCACCGCTGGACCGAGTG...CTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGTGTAATAAACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| CDS-3UTR CCA 90 bp | GTGGGGCTGTGCACACGTAGTAAAGGCGCATGGCGTCCTCGGCCCGCGCACTGTAACACAGCCTCCTTGTaGCCGCACCTCCCCAGTACC | + |
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Preference number: 4 (lower is better) Translates to: VGLCTRSKGAWRPRPAHCNTASL*PHLPST Trigger: GGTACTGGGGAGGTGCGGCCACAAGGAGGCTGTGTT...ACAGTGCGCGGGCCGAGGACGCCATGCGCCTTTACTACGTGTGCACAGCCCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592962.5 |
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| CDS-3UTR CCA 90 bp | TGGCGTCCTCGGCCCGCGCACTGTGTGACTGGAAGAACACAGCCTCCTTGTGGCGGCAACGTGGGGTCCTaGGACACGTCGGCGATAATC | + |
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Preference number: 4 (lower is better) Translates to: WRPRPAHCVTGRTQPPCGGNVGS*DTSAII Trigger: GATTATCGCCGACGTGTCCCAGGACCCCACGTTGCC...GCCACAAGGAGGCTGTGTTCTTCCAGTCACACAGTGCGCGGGCCGAGGACGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| CDS-3UTR CCA 90 bp | AGCGGTGGCCGCAGTGTGGGGCTGTGCACACGTAGTAAAGGCGCATGGCGTCCTTTGTGGCCGCACTTTTaGCACGGGTGGTCCTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: SGGRSVGLCTRSKGAWRPLWPHF*HGWSSV Trigger: GACCGAGGACCACCCGTGCCAAAAGTGCGGCCACAA...AGGACGCCATGCGCCTTTACTACGTGTGCACAGCCCCACACTGCGGCCACCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
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| CDS-3UTR CCA 90 bp | ACAGCCTCCTTGTGGCCGCACTTTTGGCACGGGTGGTCCTCGGTCCGCGGCAACAACACAGCCTCCTTGTaGCCGCACTTTTGGCACGGG | + |
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Preference number: 4 (lower is better) Translates to: TASLWPHFWHGWSSVRGNNTASL*PHFWHG Trigger: CCCGTGCCAAAAGTGCGGCCACAAGGAGGCTGTGTT...GTTGCCGCGGACCGAGGACCACCCGTGCCAAAAGTGCGGCCACAAGGAGGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
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| CDS-3UTR CCA 90 bp | AGTAAAGGCGCATGGCGTCCTCGGCCCGCGCACTGTGTGACTGGAAGAACACAGCGTAGTAAAGGCGCATaGCGTCCTCGGCCCGCGCAC | + |
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Preference number: 4 (lower is better) Translates to: SKGAWRPRPAHCVTGRTQRSKGA*RPRPAH Trigger: GTGCGCGGGCCGAGGACGCCATGCGCCTTTACTACG...CTGTGTTCTTCCAGTCACACAGTGCGCGGGCCGAGGACGCCATGCGCCTTTACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| CDS-3UTR GCA 90 bp | ACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTGCACACGTAGTAAAGGCGCACGCAGTGTGGGGCTGTaGACACGTAGTAAAGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: TRSSGGRSVGLCTRSKGARSVGL*TRSKGA Trigger: TGCGCCTTTACTACGTGTGCACAGCCCCACACTGCG...TGCGCCTTTACTACGTGTGCACAGCCCCACACTGCGGCCACCGCTGGACCGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
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| CDS-3UTR CCA 90 bp | CTTTTGGCACGGGTGGTCCTCGGTCCGCGGCAACGTGGGGTCCTGGGACACGTCACGTCGGCGATAATCTaGGTCAGTTCGTCCACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLARVVLGPRQRGVLGHVTSAII*VSSSTS Trigger: CGAAGTGGACGAACTGACCCAGATTATCGCCGACGT...GACGTGTCCCAGGACCCCACGTTGCCGCGGACCGAGGACCACCCGTGCCAAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
||
| CDS-3UTR CCA 90 bp | CGCGCACTGTGTGACTGGAAGAACACAGCCTCCTTGTGGCCGCACCTCCCCAGTGGCAACGTGGGGTCCTaGGACACGTCGGCGATAATC | + |
|
Preference number: 4 (lower is better) Translates to: RALCDWKNTASLWPHLPSGNVGS*DTSAII Trigger: GATTATCGCCGACGTGTCCCAGGACCCCACGTTGCC...ACTGGGGAGGTGCGGCCACAAGGAGGCTGTGTTCTTCCAGTCACACAGTGCGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592962.5 |
||
| CDS-3UTR CCA 90 bp | CGTAGTAAAGGCGCATGGCGTCCTCGGCCCGCGCACTGTGTGACTGGAAGAACAGCGGTGGCCGCAGTGTaGGGCTGTGCACACGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RSKGAWRPRPAHCVTGRTAVAAV*GCAHVV Trigger: TACTACGTGTGCACAGCCCCACACTGCGGCCACCGC...TGTTCTTCCAGTCACACAGTGCGCGGGCCGAGGACGCCATGCGCCTTTACTACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
||
| CDS-3UTR CCA 90 bp | TTTATTACACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGGCGGTGGCCGCAGTGTaGGGCTGTGCACACGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FITLGGERRSLGPAVAAVAVAAV*GCAHVV Trigger: TACTACGTGTGCACAGCCCCACACTGCGGCCACCGC...CACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGTGTAATAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
||
| CDS-3UTR CCA 90 bp | CACTGTGTGACTGGAAGAACACAGCCTCCTTGTGGCCGCACTTTTGGCACGGGTCACTCGGTCCAGCGGTaGCCGCAGTGTGGGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HCVTGRTQPPCGRTFGTGHSVQR*PQCGAV Trigger: CACAGCCCCACACTGCGGCCACCGCTGGACCGAGTG...ACCCGTGCCAAAAGTGCGGCCACAAGGAGGCTGTGTTCTTCCAGTCACACAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
||
| CDS-3UTR CCA 90 bp | GGAATCTGGTGTTTATTACACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGCACTCGGTCCAGCGGTaGCCGCAGTGTGGGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GIWCLLHSGERGGHSVQRHSVQR*PQCGAV Trigger: CACAGCCCCACACTGCGGCCACCGCTGGACCGAGTG...CCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGTGTAATAAACACCAGATTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000592962.5 |
||
| CDS-3UTR CCA 90 bp | GTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTGCACACGTAGTAAAGGCCCAAGGCGCTTGGCTTaGTTGAAGGCCAGTGCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VTRSSGGRSVGLCTRSKGPRRLA*LKASAH Trigger: ATGCGCACTGGCCTTCAACCAAGCCAAGCGCCTTGG...GCCTTTACTACGTGTGCACAGCCCCACACTGCGGCCACCGCTGGACCGAGTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586439.1 |
||
| CDS-3UTR TCA 90 bp | AGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTGCACACGTAGTAAAGCTCCCCAGTACCAGCTaGACGCTCACTTTTGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: RSLGPAVAAVWGCAHVVKLPSTS*TLTFGT Trigger: CGTGCCAAAAGTGAGCGTTCAGCTGGTACTGGGGAG...CTTTACTACGTGTGCACAGCCCCACACTGCGGCCACCGCTGGACCGAGTGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000592962.5 |
||
| CDS-3UTR GCA 90 bp | TACACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGACGCGTAGAGCAGAATaGGGTTCTCCTTGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YTRGREEVTRSSGGRSVGTRRAE*GSPCLP Trigger: AGGAAGACAAGGAGAACCGCATTCTGCTCTACGCGT...CCCCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGTGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000586439.1 ENST00000592962.5 |
||
| CDS-3UTR CCA 90 bp | CCAGCGGTGGCCGCAGTGTGGGGCTGTGCACACGTAGTAAAGGCGCATGGCGTCACGTCGGCGATAATCTaGGTCAGTTCGTCCACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: PAVAAVWGCAHVVKAHGVTSAII*VSSSTS Trigger: CGAAGTGGACGAACTGACCCAGATTATCGCCGACGT...GACGCCATGCGCCTTTACTACGTGTGCACAGCCCCACACTGCGGCCACCGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
||
| CDS-3UTR CCA 90 bp | TGTTTATTACACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGGGCAACGTGGGGTCCTaGGACACGTCGGCGATAATC | + |
|
Preference number: 4 (lower is better) Translates to: CLLHSGERGGHSVQRWPQGNVGS*DTSAII Trigger: GATTATCGCCGACGTGTCCCAGGACCCCACGTTGCC...CTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGTGTAATAAACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
||
| CDS-3UTR CCA 90 bp | TTTATTACACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTTGTGGCCGCACTTTTaGCACGGGTGGTCCTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FITLGGERRSLGPAVAAVLWPHF*HGWSSV Trigger: GACCGAGGACCACCCGTGCCAAAAGTGCGGCCACAA...CACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGTGTAATAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
||
| CDS-3UTR CCA 90 bp | GTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTGCACACGTAGTAAAGGCCGCGCACTGTGTGACTaGAAGAACACAGCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTRSSGGRSVGLCTRSKGRALCD*KNTASL Trigger: CAAGGAGGCTGTGTTCTTCCAGTCACACAGTGCGCG...GCCTTTACTACGTGTGCACAGCCCCACACTGCGGCCACCGCTGGACCGAGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
||
| CDS-3UTR CCA 90 bp | ACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTGCACACGTAGTAAAGGCGCAGTTCCGGCACATTCCTaGCAGAAGCGAATACCCACG | + |
|
Preference number: 4 (lower is better) Translates to: TRSSGGRSVGLCTRSKGAVPAHS*QKRIPT Trigger: CGTGGGTATTCGCTTCTGCCAGGAATGTGCCGGAAC...TGCGCCTTTACTACGTGTGCACAGCCCCACACTGCGGCCACCGCTGGACCGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585842.5 |
||
| CDS-3UTR CCA 90 bp | GAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTGCACACGTAGTAAACTGAACGCTCACTTTTaGCACGGGTGGTCCTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EVTRSSGGRSVGLCTRSKLNAHF*HGWSSV Trigger: GACCGAGGACCACCCGTGCCAAAAGTGAGCGTTCAG...TTTACTACGTGTGCACAGCCCCACACTGCGGCCACCGCTGGACCGAGTGACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592962.5 |
||
| CDS-3UTR GCA 90 bp | CTGGTGTTTATTACACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCCGCAGTGTGGGGCTGTaGACACGTAGTAAAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVFITLGGERRSLGPAVARSVGL*TRSKGA Trigger: TGCGCCTTTACTACGTGTGCACAGCCCCACACTGCG...GGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGTGTAATAAACACCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000592962.5 |
||
| CDS-3UTR CCA 90 bp | CACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTTCTCCTTGTCTTCCTTaGGGTACAGCATGTTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: HSGERGGHSVQRWPQCGASPCLP*GTACCY Trigger: GTAACAACATGCTGTACCCCAAGGAAGACAAGGAGA...AGCCCCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000586439.1 ENST00000592962.5 |
||
| CDS-3UTR CCA 90 bp | GAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTGCACACGTAGTAAACGCGCACTGTGTGACTaGAAGAACACAGCCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EVTRSSGGRSVGLCTRSKRALCD*KNTASL Trigger: CAAGGAGGCTGTGTTCTTCCAGTCACACAGTGCGCG...TTTACTACGTGTGCACAGCCCCACACTGCGGCCACCGCTGGACCGAGTGACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000585842.5 ENST00000586439.1 ENST00000592962.5 |
||
| CDS-3UTR GCA 90 bp | CGCGCACTGTGTGACTGGAAGAACACAGCCTCCTTGTGGCCGCACTTTTGGCACCGCAGTGTGGGGCTGTaGACACGTAGTAAAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RALCDWKNTASLWPHFWHRSVGL*TRSKGA Trigger: TGCGCCTTTACTACGTGTGCACAGCCCCACACTGCG...GTGCCAAAAGTGCGGCCACAAGGAGGCTGTGTTCTTCCAGTCACACAGTGCGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
||
| CDS-3UTR CCA 90 bp | GAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTGCACACGTAAGAATAGTATGGATCTaGTGCCAGAGCCGGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ERRSLGPAVAAVWGCAHVRIVWI*CQSREN Trigger: GTTTTCCCGGCTCTGGCACCAGATCCATACTATTCT...TACGTGTGCACAGCCCCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586439.1 |
||
| CDS-3UTR CCA 90 bp | GGGCTGTGCACACGTAGTAAAGGCGCATGGCGTCCTCGGCCCGCGCACTGTGTGGTTTACAGAATAGTATaGATCTGGTGCCAGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GLCTRSKGAWRPRPAHCVVYRIV*IWCQSR Trigger: CCGGCTCTGGCACCAGATCCATACTATTCTGTAAAC...CACACAGTGCGCGGGCCGAGGACGCCATGCGCCTTTACTACGTGTGCACAGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586439.1 |
||
| CDS-3UTR GCA 90 bp | TCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTGCACACGTAGTAAAGGCGATAGTATGGATCTGGTaGCAGAGCCGGGAAAACGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLGPAVAAVWGCAHVVKAIVWIW*QSREND Trigger: ATCGTTTTCCCGGCTCTGGCACCAGATCCATACTAT...CGCCTTTACTACGTGTGCACAGCCCCACACTGCGGCCACCGCTGGACCGAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586439.1 |
||
| CDS-3UTR CCA 90 bp | AGTGTGGGGCTGTGCACACGTAGTAAAGGCGCATGGCGTCCTCGGCCCGCGCACATGTTGTTACATTCCTaGCAGAAGCGAATACCCACG | + |
|
Preference number: 4 (lower is better) Translates to: SVGLCTRSKGAWRPRPAHMLLHS*QKRIPT Trigger: CGTGGGTATTCGCTTCTGCCAGGAATGTAACAACAT...GTGCGCGGGCCGAGGACGCCATGCGCCTTTACTACGTGTGCACAGCCCCACACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592962.5 |
||
| CDS-3UTR GCA 90 bp | CGCGCACTGTGTGACTGGAAGAACACAGCCTCCTTGTGGCCGCACTTTTGGCACACGCGTAGAGCAGAATaGGGTTCTCCTTGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RALCDWKNTASLWPHFWHTRRAE*GSPCLP Trigger: AGGAAGACAAGGAGAACCGCATTCTGCTCTACGCGT...GTGCCAAAAGTGCGGCCACAAGGAGGCTGTGTTCTTCCAGTCACACAGTGCGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586439.1 |
||
| CDS-3UTR CCA 90 bp | GAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTGCACACGTAGTAAATCTCCTTGTCTTCCTTaGGGTACAGCATGTTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: EVTRSSGGRSVGLCTRSKSPCLP*GTACCY Trigger: GTAACAACATGCTGTACCCCAAGGAAGACAAGGAGA...TTTACTACGTGTGCACAGCCCCACACTGCGGCCACCGCTGGACCGAGTGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000586439.1 ENST00000592962.5 |
||
| CDS-3UTR CCA 90 bp | CTGTGTGACTGGAAGAACACAGCCTCCTTGTGGCCGCACTTTTGGCACGGGTGGATTGCTTCCAATTTTTaGGCATCGCCGCCTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LCDWKNTASLWPHFWHGWIASNF*ASPPQF Trigger: AAACTGAGGCGGCGATGCCCAAAAATTGGAAGCAAT...CCACCCGTGCCAAAAGTGCGGCCACAAGGAGGCTGTGTTCTTCCAGTCACACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000586439.1 |
||
| CDS-3UTR GCA 90 bp | ACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTGCACACGTAGTAAAGGCGCAAGAGGTTTCATGGCTTaGTTCAATCTTTTGATATCT | + |
|
Preference number: 4 (lower is better) Translates to: TRSSGGRSVGLCTRSKGARGFMA*FNLLIS Trigger: AGATATCAAAAGATTGAAGCAAGCCATGAAACCTCT...TGCGCCTTTACTACGTGTGCACAGCCCCACACTGCGGCCACCGCTGGACCGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586439.1 |
||
| CDS GCA 90 bp | CCATGGCGACGCGCAGCCCGCGCAGCCCTCCCAGCCTTCCGCGCTTaGTCCGCCGCGCTACAGGTCGCGGGAGGGGCCAGGCCTAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PWRRAARAALPAFRA*SAALQVAGGARPRC Trigger: GCACCTAGGCCTGGCCCCTCCCGCGACCTGTAGCGCGGCGGAGCAAGCGCGGAAGGCTGGGAGGGCTGCGCGGGCTGCGCGTCGCCATGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000586439.1 ENST00000586789.5 |
||
| CDS CCA 90 bp | AGCGAATACCCACGAAGCCCGGCTCGTAAGTCCCGTCGGGCTCCATaGCGACGCGCAGCCCGCGCAGCCCTCCCAGCCTTCCGCGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SEYPRSPARKSRRAP*RRAARAALPAFRAC Trigger: GCAAGCGCGGAAGGCTGGGAGGGCTGCGCGGGCTGCGCGTCGCCATGGAGCCCGACGGGACTTACGAGCCGGGCTTCGTGGGTATTCGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000586789.5 ENST00000592962.5 |
||
| CDS CCA 90 bp | GGCCTAGGTGCTTCGCCAAAAGAGGGCGGAGCTGCGCACACGTGCTaGCTCCCCGCCGCCTCGGGCTCGGCTCTCTCCGCGCAGAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GLGASPKEGGAAHTC*LPAASGSALSAQRF Trigger: AAACCTCTGCGCGGAGAGAGCCGAGCCCGAGGCGGCGGGGAGCCAGCACGTGTGCGCAGCTCCGCCCTCTTTTGGCGAAGCACCTAGGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000586439.1 ENST00000586789.5 |
||
| CDS CCA 90 bp | ATGTTGTTACCACGAAGCCCGGCTCGTAAGTCCCGTCGGGCTCCATaGCGACGCGCAGCCCGCGCAGCCCTCCCAGCCTTCCGCGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: MLLPRSPARKSRRAP*RRAARAALPAFRAC Trigger: GCAAGCGCGGAAGGCTGGGAGGGCTGCGCGGGCTGCGCGTCGCCATGGAGCCCGACGGGACTTACGAGCCGGGCTTCGTGGTAACAACAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586439.1 |
||
| CDS-3UTR CAA 90 bp | GGCCGCACTTTTGGCACGGGTGGTCCTCGGTCCGCGGCAACGTGGGGTCCTGGGCTTGTGGCCGCACTTTaGGCACGGGTGGTCCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: GRTFGTGGPRSAATWGPGLVAAL*ARVVLG Trigger: ACCGAGGACCACCCGTGCCAAAAGTGCGGCCACAAG...CCCAGGACCCCACGTTGCCGCGGACCGAGGACCACCCGTGCCAAAAGTGCGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
||
| CDS-3UTR CAA 90 bp | AGGCGCATGGCGTCCTCGGCCCGCGCACTGTGTGACTGGAAGAACACAGCCTCCCTTGTGGCCGCACTTTaGGCACGGGTGGTCCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RRMASSARALCDWKNTASLVAAL*ARVVLG Trigger: ACCGAGGACCACCCGTGCCAAAAGTGCGGCCACAAG...GGAGGCTGTGTTCTTCCAGTCACACAGTGCGCGGGCCGAGGACGCCATGCGCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
||
| CDS-3UTR CAA 90 bp | GCGCACTGTGTGACTGGAAGAACACAGCCTCCTTGTGGCCGCACTTTTGGCACGCCCAGCCTTCCGCGCTaGCTCCGCCGCGCTACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: AHCVTGRTQPPCGRTFGTPSLPR*LRRATG Trigger: ACCTGTAGCGCGGCGGAGCAAGCGCGGAAGGCTGGG...CGTGCCAAAAGTGCGGCCACAAGGAGGCTGTGTTCTTCCAGTCACACAGTGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586439.1 |
||
| CDS-3UTR CAA 90 bp | GTGTGGGGCTGTGCACACGTAGTAAAGGCGCATGGCGTCCTCGGCCCGCGCACTGCTGAACGCTCACTTTaGGCACGGGTGGTCCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: VWGCAHVVKAHGVLGPRTAERSL*ARVVLG Trigger: ACCGAGGACCACCCGTGCCAAAAGTGAGCGTTCAGC...AGTGCGCGGGCCGAGGACGCCATGCGCCTTTACTACGTGTGCACAGCCCCACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592962.5 |
||
| CDS CCA 90 bp | CACTTTTGGCACGGGTGGTCCTCGGTCCGCGGCAACGTGGGGTCCTaGGACACGTCGGCGATAATCTGGGTCAGTTCGTCCACTTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HFWHGWSSVRGNVGS*DTSAIIWVSSSTSC Trigger: GCACGAAGTGGACGAACTGACCCAGATTATCGCCGACGTGTCCCAGGACCCCACGTTGCCGCGGACCGAGGACCACCCGTGCCAAAAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000221859.9 ENST00000585842.5 ENST00000586439.1 ENST00000586789.5 ENST00000589591.5 ENST00000592962.5 |
||
| CDS-3UTR CAA 90 bp | GCAGTGTGGGGCTGTGCACACGTAGTAAAGGCGCATGGCGTCCTCGGCCCGCGCAGAATGCGGTTCTCCTaGTCTTCCTTGGGGTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: AVWGCAHVVKAHGVLGPRRMRFS*SSLGYS Trigger: GCTGTACCCCAAGGAAGACAAGGAGAACCGCATTCT...GCGCGGGCCGAGGACGCCATGCGCCTTTACTACGTGTGCACAGCCCCACACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000586439.1 ENST00000592962.5 |
||
| CDS-3UTR CAA 90 bp | TGTTTATTACACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGGCCAAGGCGCTTGGCTaGGTTGAAGGCCAGTGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: CLLHSGERGGHSVQRWPQAKALG*VEGQCA Trigger: TGCGCACTGGCCTTCAACCAAGCCAAGCGCCTTGGC...CTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGTGTAATAAACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000586439.1 |
||
| CDS GCA 90 bp | TCTCTTTGGGGATGGGCAGGACATGAGAGTCAGGATCACTTGAGGTaGAGCGGAGGGCGAACAGGGAGTCCGATCACAGAGGCAGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLWGWAGHESQDHLR*SGGRTGSPITEAGG Trigger: GCCCCCTGCCTCTGTGATCGGACTCCCTGTTCGCCCTCCGCTGCACCTCAAGTGATCCTGACTCTCATGTCCTGCCCATCCCCAAAGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000586789.5 ENST00000589069.1 |
||
| CDS CCA 90 bp | CGGCGCTCACCGCGTAGAGCAGAATGCGGTTCTCCTTGTCTTCCTTaGGGTACAGCATGTTGTTACTGTGGGGAGGGGGAGGTGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RRSPRRAECGSPCLP*GTACCYCGEGEVPG Trigger: CCCTGGCACCTCCCCCTCCCCACAGTAACAACATGCTGTACCCCAAGGAAGACAAGGAGAACCGCATTCTGCTCTACGCGGTGAGCGCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589069.1 |
||
| CDS-3UTR CAA 90 bp | ACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTTGGGGTACAGCATGTaGTTACATTCCTGGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TRGREEVTRSSGGRSVGLLGYSM*LHSWQK Trigger: CTTCTGCCAGGAATGTAACAACATGCTGTACCCCAA...CAGCCCCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000592962.5 |
||
| CDS-3UTR CAA 90 bp | TCACTCGGTCCAGCGGTGGCCGCAGTGTGGGGCTGTGCACACGTAGTAAAGGCGAAGAACACAGCCTCCTaGTGGCCGCACTTTTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SLGPAVAAVWGCAHVVKAKNTAS*WPHFWH Trigger: GTGCCAAAAGTGCGGCCACAAGGAGGCTGTGTTCTT...CGCCTTTACTACGTGTGCACAGCCCCACACTGCGGCCACCGCTGGACCGAGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585842.5 ENST00000586439.1 |
||
| CDS-3UTR CAA 90 bp | ATTACACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGTGGCCGCAGTGTGGAGAATGCGGTTCTCCTaGTCTTCCTTGGGGTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: ITLGGERRSLGPAVAAVWRMRFS*SSLGYS Trigger: GCTGTACCCCAAGGAAGACAAGGAGAACCGCATTCT...CCACACTGCGGCCACCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGTGTAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000586439.1 ENST00000592962.5 |
||
| CDS TCA 90 bp | AGGACTCTCTTTGGGGATGGGCAGGACATGAGAGTCAGGATCACTTaGGGTGCAGCGGAGGGCGAACAGGGAGTCCGATCACAGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RTLFGDGQDMRVRIT*GAAEGEQGVRSQRQ Trigger: CTGCCTCTGTGATCGGACTCCCTGTTCGCCCTCCGCTGCACCTCAAGTGATCCTGACTCTCATGTCCTGCCCATCCCCAAAGAGAGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000586789.5 ENST00000589069.1 |
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| CDS TCA 90 bp | CCGGAGGATATGACGACAGGACTCTCTTTGGGGATGGGCAGGACATaGGAGTCAGGATCACTTGAGGTGCAGCGGAGGGCGAACAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: PEDMTTGLSLGMGRT*ESGSLEVQRRANRE Trigger: CTCCCTGTTCGCCCTCCGCTGCACCTCAAGTGATCCTGACTCTCATGTCCTGCCCATCCCCAAAGAGAGTCCTGTCGTCATATCCTCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000586789.5 ENST00000589069.1 |
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| CDS CCA 90 bp | CCTCCTGCTGGTAATCACAGTTCCGGCACTACGAGAGGGCGAGTGTaGGGGAAAGGGGGTCACGGAAGGATTCCAGACAAGATTGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: PPAGNHSSGTTRGRV*GKGGHGRIPDKIGR Trigger: CCTCCCAATCTTGTCTGGAATCCTTCCGTGACCCCCTTTCCCCCACACTCGCCCTCTCGTAGTGCCGGAACTGTGATTACCAGCAGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000586789.5 ENST00000589069.1 |
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| CDS CCA 90 bp | AGTTCCGGCACGCGTAGAGCAGAATGCGGTTCTCCTTGTCTTCCTTaGGGTACAGCATGTTGTTACTGTGGGGAGGGGGAGGTGCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: SSGTRRAECGSPCLP*GTACCYCGEGEVPG Trigger: CCCTGGCACCTCCCCCTCCCCACAGTAACAACATGCTGTACCCCAAGGAAGACAAGGAGAACCGCATTCTGCTCTACGCGTGCCGGAACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589591.5 |
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| CDS-3UTR CAA 90 bp | GGGCTGTGCACACGTAGTAAAGGCGCATGGCGTCCTCGGCCCGCGCACTGTGTGAATTGCTTCCAATTTTaGGGCATCGCCGCCTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: GLCTRSKGAWRPRPAHCVNCFQF*GIAASV Trigger: AACTGAGGCGGCGATGCCCAAAAATTGGAAGCAATT...CACACAGTGCGCGGGCCGAGGACGCCATGCGCCTTTACTACGTGTGCACAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586439.1 |
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| CDS-3UTR CAA 90 bp | GGAATCTGGTGTTTATTACACTCGGGGGAGAGAGGAGGTCACTCGGTCCAGCGGAAGAACACAGCCTCCTaGTGGCCGCACCTCCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: GIWCLLHSGERGGHSVQRKNTAS*WPHLPS Trigger: ACTGGGGAGGTGCGGCCACAAGGAGGCTGTGTTCTT...CCGCTGGACCGAGTGACCTCCTCTCTCCCCCGAGTGTAATAAACACCAGATTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592962.5 |
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| CDS-3UTR CAA 90 bp | CACTGTGTGACTGGAAGAACACAGCCTCCTTGTGGCCGCACTTTTGGCACGGGTCAGAAGCCAAGGCGCTaGGCTTGGTTGAAGGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: HCVTGRTQPPCGRTFGTGQKPRR*AWLKAS Trigger: ACTGGCCTTCAACCAAGCCAAGCGCCTTGGCTTCTG...ACCCGTGCCAAAAGTGCGGCCACAAGGAGGCTGTGTTCTTCCAGTCACACAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000586439.1 |
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| CDS-3UTR CAA 90 bp | CTGTGTGACTGGAAGAACACAGCCTCCTTGTGGCCGCACTTTTGGCACGGGTGGTTGGGGTACAGCATGTaGTTACCACGAAGCCCGGCT | + |
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Preference number: 5 (lower is better) Translates to: LCDWKNTASLWPHFWHGWLGYSM*LPRSPA Trigger: AGCCGGGCTTCGTGGTAACAACATGCTGTACCCCAA...CCACCCGTGCCAAAAGTGCGGCCACAAGGAGGCTGTGTTCTTCCAGTCACACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586439.1 |
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| CDS CCA 90 bp | TGCTTCCAATTTTTGGGCATCGCCGCCTCAGTTTACAGAATAGTATaGATCTGGTGCCAGAGCCGGGAAAACGATGCGCATCGTAAACCG | + |
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Preference number: 5 (lower is better) Translates to: CFQFLGIAASVYRIV*IWCQSRENDAHRKP Trigger: CGGTTTACGATGCGCATCGTTTTCCCGGCTCTGGCACCAGATCCATACTATTCTGTAAACTGAGGCGGCGATGCCCAAAAATTGGAAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000586439.1 ENST00000586789.5 |
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| CDS-3UTR CAA 90 bp | CTGTGTGACTGGAAGAACACAGCCTCCTTGTGGCCGCACTTTTGGCACGGGTGGCAGAGGTTTCATGGCTaGCTTCAATCTTTTGATATC | + |
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Preference number: 5 (lower is better) Translates to: LCDWKNTASLWPHFWHGWQRFHG*LQSFDI Trigger: GATATCAAAAGATTGAAGCAAGCCATGAAACCTCTG...CCACCCGTGCCAAAAGTGCGGCCACAAGGAGGCTGTGTTCTTCCAGTCACACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000586439.1 |
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| CDS TCA 90 bp | CTCGGCTCTCTCCGCGCAGAGGTTTCATGGCTTGCTTCAATCTTTTaGTATCTTAGAGTAATTGCTTCCAATTTTTGGGCATCGCCGCCT | + |
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Preference number: 5 (lower is better) Translates to: LGSLRAEVSWLASIF*YLRVIASNFWASPP Trigger: AGGCGGCGATGCCCAAAAATTGGAAGCAATTACTCTAAGATATCAAAAGATTGAAGCAAGCCATGAAACCTCTGCGCGGAGAGAGCCGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000586439.1 ENST00000586789.5 |
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| CDS GCA 72 bp | CGCGCAGCCCGCGCAGCCCTCCCAGCCTTCCGCGCTTaGTCCGCCGCGCTACAGGTCGCGGGAGGGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: RAARAALPAFRA*SAALQVAGGAR Trigger: CCTGGCCCCTCCCGCGACCTGTAGCGCGGCGGAGCAAGCGCGGAAGGCTGGGAGGGCTGCGCGGGCTGCGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000586439.1 ENST00000586789.5 |
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| CDS CCA 72 bp | GCTTCGCCAAAAGAGGGCGGAGCTGCGCACACGTGCTaGCTCCCCGCCGCCTCGGGCTCGGCTCTCTCCGCG | + |
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Preference number: 6 (lower is better) Translates to: ASPKEGGAAHTC*LPAASGSALSA Trigger: CGCGGAGAGAGCCGAGCCCGAGGCGGCGGGGAGCCAGCACGTGTGCGCAGCTCCGCCCTCTTTTGGCGAAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000586439.1 ENST00000586789.5 |
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| CDS CCA 72 bp | CCACGAAGCCCGGCTCGTAAGTCCCGTCGGGCTCCATaGCGACGCGCAGCCCGCGCAGCCCTCCCAGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: PRSPARKSRRAP*RRAARAALPAF Trigger: GAAGGCTGGGAGGGCTGCGCGGGCTGCGCGTCGCCATGGAGCCCGACGGGACTTACGAGCCGGGCTTCGTGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000586439.1 ENST00000586789.5 ENST00000589591.5 ENST00000592962.5 |
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| CDS GCA 72 bp | GCCGCGCTACAGGTCGCGGGAGGGGCCAGGCCTAGGTaGTTCGCCAAAAGAGGGCGGAGCTGCGCACACGTG | + |
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Preference number: 6 (lower is better) Translates to: AALQVAGGARPR*FAKRGRSCAHV Trigger: CACGTGTGCGCAGCTCCGCCCTCTTTTGGCGAAGCACCTAGGCCTGGCCCCTCCCGCGACCTGTAGCGCGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000586439.1 ENST00000586789.5 |
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| CDS CCA 72 bp | GCCGCACCTCCCCAGTACCAGCTGAACGCTCACTTTTaGCACGGGTGGTCCTCGGTCCGCGGCAACGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: AAPPQYQLNAHF*HGWSSVRGNVG Trigger: CCCCACGTTGCCGCGGACCGAGGACCACCCGTGCCAAAAGTGAGCGTTCAGCTGGTACTGGGGAGGTGCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592962.5 |
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| CDS CAA 72 bp | GGCCGCACCTCCCCAGTACCAGCTGAACGCTCACTTTaGGCACGGGTGGTCCTCGGTCCGCGGCAACGTGGG | + |
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Preference number: 6 (lower is better) Translates to: GRTSPVPAERSL*ARVVLGPRQRG Trigger: CCCACGTTGCCGCGGACCGAGGACCACCCGTGCCAAAAGTGAGCGTTCAGCTGGTACTGGGGAGGTGCGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592962.5 |
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| CDS CAA 90 bp | CCTCCTTGTGGCCGCACCTCCCCAGTACCAGCTGAACGCTCACTTTaGGCACGGGTGGTCCTCGGTCCGCGGCAACGTGGGGTCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: PPCGRTSPVPAERSL*ARVVLGPRQRGVLG Trigger: TCCCAGGACCCCACGTTGCCGCGGACCGAGGACCACCCGTGCCAAAAGTGAGCGTTCAGCTGGTACTGGGGAGGTGCGGCCACAAGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592962.5 |
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| CDS CCA 72 bp | CACGGGTGGTCCTCGGTCCGCGGCAACGTGGGGTCCTaGGACACGTCGGCGATAATCTGGGTCAGTTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: HGWSSVRGNVGS*DTSAIIWVSSS Trigger: GGACGAACTGACCCAGATTATCGCCGACGTGTCCCAGGACCCCACGTTGCCGCGGACCGAGGACCACCCGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000221859.9 ENST00000585842.5 ENST00000586439.1 ENST00000586789.5 ENST00000589591.5 ENST00000592962.5 |
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| CDS TCA 72 bp | ACAGCCTCCTTGTGGCCGCACCTCCCCAGTACCAGCTaGACGCTCACTTTTGGCACGGGTGGTCCTCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: TASLWPHLPSTS*TLTFGTGGPRS Trigger: GGACCGAGGACCACCCGTGCCAAAAGTGAGCGTTCAGCTGGTACTGGGGAGGTGCGGCCACAAGGAGGCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592962.5 |
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| CDS CAA 90 bp | GGCGAGTGTGGGGGAAAGGGGGTCACGGAAGGATTCCAGACAAGATaGGGAGGAGAGGGCAGGGTGATCCCGGAGGATATGACGACAGGA | + |
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Preference number: 6 (lower is better) Translates to: GECGGKGVTEGFQTR*GGEGRVIPEDMTTG Trigger: TCCTGTCGTCATATCCTCCGGGATCACCCTGCCCTCTCCTCCCAATCTTGTCTGGAATCCTTCCGTGACCCCCTTTCCCCCACACTCGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000586789.5 ENST00000589069.1 |
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| CDS GCA 72 bp | GGATGGGCAGGACATGAGAGTCAGGATCACTTGAGGTaGAGCGGAGGGCGAACAGGGAGTCCGATCACAGAG | + |
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Preference number: 6 (lower is better) Translates to: GWAGHESQDHLR*SGGRTGSPITE Trigger: CTCTGTGATCGGACTCCCTGTTCGCCCTCCGCTGCACCTCAAGTGATCCTGACTCTCATGTCCTGCCCATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000586789.5 ENST00000589069.1 |
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| CDS CAA 72 bp | CTTTGGGGATGGGCAGGACATGAGAGTCAGGATCACTaGAGGTGCAGCGGAGGGCGAACAGGGAGTCCGATC | + |
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Preference number: 6 (lower is better) Translates to: LWGWAGHESQDH*RCSGGRTGSPI Trigger: GATCGGACTCCCTGTTCGCCCTCCGCTGCACCTCAAGTGATCCTGACTCTCATGTCCTGCCCATCCCCAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000586789.5 ENST00000589069.1 |
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| CDS CAA 90 bp | CAGGACTCTCTTTGGGGATGGGCAGGACATGAGAGTCAGGATCACTaGAGGTGCAGCGGAGGGCGAACAGGGAGTCCGATCACAGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: QDSLWGWAGHESQDH*RCSGGRTGSPITEA Trigger: TGCCTCTGTGATCGGACTCCCTGTTCGCCCTCCGCTGCACCTCAAGTGATCCTGACTCTCATGTCCTGCCCATCCCCAAAGAGAGTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000586789.5 ENST00000589069.1 |
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| CDS TCA 72 bp | TTTGGGGATGGGCAGGACATGAGAGTCAGGATCACTTaGGGTGCAGCGGAGGGCGAACAGGGAGTCCGATCA | + |
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Preference number: 6 (lower is better) Translates to: FGDGQDMRVRIT*GAAEGEQGVRS Trigger: TGATCGGACTCCCTGTTCGCCCTCCGCTGCACCTCAAGTGATCCTGACTCTCATGTCCTGCCCATCCCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000586789.5 ENST00000589069.1 |
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| CDS TCA 72 bp | ATGACGACAGGACTCTCTTTGGGGATGGGCAGGACATaGGAGTCAGGATCACTTGAGGTGCAGCGGAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: MTTGLSLGMGRT*ESGSLEVQRRA Trigger: CGCCCTCCGCTGCACCTCAAGTGATCCTGACTCTCATGTCCTGCCCATCCCCAAAGAGAGTCCTGTCGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000586789.5 ENST00000589069.1 |
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| CDS CCA 72 bp | GGCAACGTGGGGTCCTGGGACACGTCGGCGATAATCTaGGTCAGTTCGTCCACTTCGTGCGTGATCTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: GNVGSWDTSAII*VSSSTSCVILL Trigger: CAACAAGATCACGCACGAAGTGGACGAACTGACCCAGATTATCGCCGACGTGTCCCAGGACCCCACGTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000221859.9 ENST00000585842.5 ENST00000586439.1 ENST00000586789.5 ENST00000589069.1 ENST00000589591.5 ENST00000592962.5 |
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| CDS CCA 72 bp | CCGCGTAGAGCAGAATGCGGTTCTCCTTGTCTTCCTTaGGGTACAGCATGTTGTTACTGTGGGGAGGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: PRRAECGSPCLP*GTACCYCGEGE Trigger: CTCCCCCTCCCCACAGTAACAACATGCTGTACCCCAAGGAAGACAAGGAGAACCGCATTCTGCTCTACGCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589069.1 |
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| CDS CCA 72 bp | ACGCGTAGAGCAGAATGCGGTTCTCCTTGTCTTCCTTaGGGTACAGCATGTTGTTACCACGAAGCCCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: TRRAECGSPCLP*GTACCYHEARL Trigger: GAGCCGGGCTTCGTGGTAACAACATGCTGTACCCCAAGGAAGACAAGGAGAACCGCATTCTGCTCTACGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586439.1 |
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| CDS CCA 72 bp | ACGCGTAGAGCAGAATGCGGTTCTCCTTGTCTTCCTTaGGGTACAGCATGTTGTTACTGTGGGGAGGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: TRRAECGSPCLP*GTACCYCGEGE Trigger: CTCCCCCTCCCCACAGTAACAACATGCTGTACCCCAAGGAAGACAAGGAGAACCGCATTCTGCTCTACGCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589591.5 |
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| CDS GCA 72 bp | GCTGGTAATCACAGTTCCGGCACGCGTAGAGCAGAATaGGGTTCTCCTTGTCTTCCTTGGGGTACAGCATGT | + |
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Preference number: 6 (lower is better) Translates to: AGNHSSGTRRAE*GSPCLPWGTAC Trigger: ACATGCTGTACCCCAAGGAAGACAAGGAGAACCGCATTCTGCTCTACGCGTGCCGGAACTGTGATTACCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000221859.9 ENST00000586439.1 ENST00000589591.5 ENST00000592962.5 |
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| CDS GCA 72 bp | ATCGCCGCCTCAGTTTACAGAATAGTATGGATCTGGTaGCAGAGCCGGGAAAACGATGCGCATCGTAAACCG | + |
|
Preference number: 6 (lower is better) Translates to: IAASVYRIVWIW*QSRENDAHRKP Trigger: CGGTTTACGATGCGCATCGTTTTCCCGGCTCTGGCACCAGATCCATACTATTCTGTAAACTGAGGCGGCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000586439.1 ENST00000586789.5 |
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| CDS CCA 72 bp | GGCATCGCCGCCTCAGTTTACAGAATAGTATGGATCTaGTGCCAGAGCCGGGAAAACGATGCGCATCGTAAA | + |
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Preference number: 6 (lower is better) Translates to: GIAASVYRIVWI*CQSRENDAHRK Trigger: TTTACGATGCGCATCGTTTTCCCGGCTCTGGCACCAGATCCATACTATTCTGTAAACTGAGGCGGCGATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000586439.1 ENST00000586789.5 |
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| CDS CCA 72 bp | CCGCGTAGAGCAGAATGCGGTTCTCCTTGTCTTCCTTaGGGTACAGCATGTTGTTACATTCCTGGCAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: PRRAECGSPCLP*GTACCYIPGRS Trigger: GCTTCTGCCAGGAATGTAACAACATGCTGTACCCCAAGGAAGACAAGGAGAACCGCATTCTGCTCTACGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000586789.5 |
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| CDS CCA 72 bp | ACGCGTAGAGCAGAATGCGGTTCTCCTTGTCTTCCTTaGGGTACAGCATGTTGTTACATTCCTGGCAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: TRRAECGSPCLP*GTACCYIPGRS Trigger: GCTTCTGCCAGGAATGTAACAACATGCTGTACCCCAAGGAAGACAAGGAGAACCGCATTCTGCTCTACGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000221859.9 ENST00000592962.5 |
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| CDS CCA 72 bp | TTTTTGGGCATCGCCGCCTCAGTTTACAGAATAGTATaGATCTGGTGCCAGAGCCGGGAAAACGATGCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: FLGIAASVYRIV*IWCQSRENDAH Trigger: ATGCGCATCGTTTTCCCGGCTCTGGCACCAGATCCATACTATTCTGTAAACTGAGGCGGCGATGCCCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000586439.1 ENST00000586789.5 |
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| CDS TCA 72 bp | CTCCGCGCAGAGGTTTCATGGCTTGCTTCAATCTTTTaGTATCTTAGAGTAATTGCTTCCAATTTTTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: LRAEVSWLASIF*YLRVIASNFWA Trigger: TGCCCAAAAATTGGAAGCAATTACTCTAAGATATCAAAAGATTGAAGCAAGCCATGAAACCTCTGCGCGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000586439.1 ENST00000586789.5 |
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