Pregenerated sensors for POLR2D (Homo sapiens)
Ensembl gene IDs: ENSG00000144231Ensembl transcript IDs: ENST00000272645.9, ENST00000409698.1, ENST00000409955.1
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCCAGTTATTTGGGAGGCTGAGGCAGCGGGGTCAAGACTTCAGTaGGCCATGACTGTACGACTGCACTCCTCCAGCCTGGACAAGAGT | + |
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Preference number: 1 (lower is better) Translates to: APVIWEAEAAGSRLQ*AMTVRLHSSSLDKS Trigger: ACTCTTGTCCAGGCTGGAGGAGTGCAGTCGTACAGTCATGGCTCACTGAAGTCTTGACCCCGCTGCCTCAGCCTCCCAAATAACTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000272645.9 ENST00000409955.1 |
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| 3UTR TCA 90 bp | CTGAGAGTTGTGGTGCACACCTGTGGCCCCAGTTATTTGGGAGGCTaGGGCAGCGGGGTCAAGACTTCAGTGAGCCATGACTGTACGACT | + |
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Preference number: 1 (lower is better) Translates to: LRVVVHTCGPSYLGG*GSGVKTSVSHDCTT Trigger: AGTCGTACAGTCATGGCTCACTGAAGTCTTGACCCCGCTGCCTCAGCCTCCCAAATAACTGGGGCCACAGGTGTGCACCACAACTCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000272645.9 ENST00000409955.1 |
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| 3UTR CCA 90 bp | AGCACCGTGCTCCTCAGTTGCCATCTAGCACACGCCTGGATCGTCTaGGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTG | + |
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Preference number: 1 (lower is better) Translates to: STVLLSCHLAHAWIV*AAFQVSSSHSTALV Trigger: CACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCCCAGACGATCCAGGCGTGTGCTAGATGGCAACTGAGGAGCACGGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR TCA 90 bp | TTATTTGGGAGGCTGAGGCAGCGGGGTCAAGACTTCAGTGAGCCATaGCTGTACGACTGCACTCCTCCAGCCTGGACAAGAGTTAAGACC | + |
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Preference number: 1 (lower is better) Translates to: LFGRLRQRGQDFSEP*LYDCTPPAWTRVKT Trigger: GGTCTTAACTCTTGTCCAGGCTGGAGGAGTGCAGTCGTACAGTCATGGCTCACTGAAGTCTTGACCCCGCTGCCTCAGCCTCCCAAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000272645.9 ENST00000409955.1 |
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| 3UTR GCA 90 bp | CGTGCTCCTCAGTTGCCATCTAGCACACGCCTGGATCGTCTGGGCTaGCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAAT | + |
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Preference number: 1 (lower is better) Translates to: RAPQLPSSTRLDRLG*LPSLFFPFHCFSAN Trigger: ATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCCCAGACGATCCAGGCGTGTGCTAGATGGCAACTGAGGAGCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR GCA 90 bp | ATAGGTGGAAACACCAGTAAAGATGGTAGCACCGTGCTCCTCAGTTaGCATCTAGCACACGCCTGGATCGTCTGGGCTGCCTTCCAAGTC | + |
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Preference number: 1 (lower is better) Translates to: IGGNTSKDGSTVLLS*HLAHAWIVWAAFQV Trigger: GACTTGGAAGGCAGCCCAGACGATCCAGGCGTGTGCTAGATGGCAACTGAGGAGCACGGTGCTACCATCTTTACTGGTGTTTCCACCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR CCA 90 bp | AAAGATGGTAGCACCGTGCTCCTCAGTTGCCATCTAGCACACGCCTaGATCGTCTGGGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACT | + |
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Preference number: 1 (lower is better) Translates to: KDGSTVLLSCHLAHA*IVWAAFQVSSSHST Trigger: AGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCCCAGACGATCCAGGCGTGTGCTAGATGGCAACTGAGGAGCACGGTGCTACCATCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR CCA 90 bp | TGGACCAGAAAGCCGCCCTTGCCAGACACTGAACGTACCAGCACCTaGATCTTGCATTTGCCAGCCTCCAAAACTGTGAGAAATAAATTC | + |
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Preference number: 1 (lower is better) Translates to: WTRKPPLPDTERTST*ILHLPASKTVRNKF Trigger: GAATTTATTTCTCACAGTTTTGGAGGCTGGCAAATGCAAGATCCAGGTGCTGGTACGTTCAGTGTCTGGCAAGGGCGGCTTTCTGGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR CCA 90 bp | AGAGCATTATATACTTCAGTATTCTCAGGTAGCTCACAGAACCCCTaGCACATAGGTGGAAACACCAGTAAAGATGGTAGCACCGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: RALYTSVFSGSSQNP*HIGGNTSKDGSTVL Trigger: GAGCACGGTGCTACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGAGAATACTGAAGTATATAATGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR TCA 90 bp | GAACCCATCACTGATGTAGTATTAAGAGGTGGGGTCTTTGGCAGGTaGTTAAGTCATGAGAGAATATCCCTCATGAAGGGGATTAATGCC | + |
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Preference number: 1 (lower is better) Translates to: EPITDVVLRGGVFGR*LSHERISLMKGINA Trigger: GGCATTAATCCCCTTCATGAGGGATATTCTCTCATGACTTAATCACCTGCCAAAGACCCCACCTCTTAATACTACATCAGTGATGGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR CCA 90 bp | TGGCAGCACATATACCCAAATTGGAACAATACAGAGAAGACAGCATaGCCACTGCCCAAGAATGACATGCAAATTCATCAAGCATTAAAA | + |
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Preference number: 1 (lower is better) Translates to: WQHIYPNWNNTEKTA*PLPKNDMQIHQALK Trigger: TTTTAATGCTTGATGAATTTGCATGTCATTCTTGGGCAGTGGCCATGCTGTCTTCTCTGTATTGTTCCAATTTGGGTATATGTGCTGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR TCA 90 bp | CTATTTTTCAATAGCAATATGCTGTCCAGCCCTGTAAACAATTTTTaGCTGTCTTGCAGAATAGCTGACCAGGCTTTCAACCTACAACAG | + |
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Preference number: 1 (lower is better) Translates to: LFFNSNMLSSPVNNF*LSCRIADQAFNLQQ Trigger: CTGTTGTAGGTTGAAAGCCTGGTCAGCTATTCTGCAAGACAGTCAAAAATTGTTTACAGGGCTGGACAGCATATTGCTATTGAAAAATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR TCA 90 bp | TTAGTGCTTTTTATTAACAGTATTACTAAGGCAACTCATCGATGCTaGAGTCCCATCCAGTATGCTATTTTTCATGCCTCAGGTCTAATA | + |
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Preference number: 1 (lower is better) Translates to: LVLFINSITKATHRC*SPIQYAIFHASGLI Trigger: TATTAGACCTGAGGCATGAAAAATAGCATACTGGATGGGACTTCAGCATCGATGAGTTGCCTTAGTAATACTGTTAATAAAAAGCACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTGTGGCCCCAGTTATTTaGGAGGCTGAGGCAGCGGGG | + |
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Preference number: 2 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGVAPVI*EAEAAG Trigger: CCCCGCTGCCTCAGCCTCCCAAATAACTGGGGCCAC...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR GCA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTGCTCGCCACCCCCTCTaGCTCCCAGGTTCAAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGARHPL*LPGSSN Trigger: ATTGCTTGAACCTGGGAGGCAGAGGGGGTGGCGAGC...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACACAATGGTGCAATCTTaGCTCGCCACCCCCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GCLPSLFFPFHCFSANQHTMVQS*LATPSA Trigger: GGCAGAGGGGGTGGCGAGCCAAGATTGCACCATTGT...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACGCTGGAGTACAATGGTaGAATCTTGGCTCGCCACCC | + |
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Preference number: 2 (lower is better) Translates to: GCLPSLFFPFHCFSANQHAGVQW*NLGSPP Trigger: GGGTGGCGAGCCAAGATTGCACCATTGTACTCCAGC...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACGGGAAGGTGGTGTTATaGCTGGGGATGTGGTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: GCLPSLFFPFHCFSANQHGKVVL*LGMWFL Trigger: GAGAAACCACATCCCCAGGCATAACACCACCTTCCC...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTTGTGGTGCACACCTGTaGCCCCAGTTATTTGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGCGAHL*PQLFGR Trigger: CCTCCCAAATAACTGGGGCCACAGGTGTGCACCACA...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTGTGCACACCTGGTTGTaGACCTCTTTGGCACGACCA | + |
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Preference number: 2 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGVHTWL*TSLARP Trigger: TGGTCGTGCCAAAGAGGTCCACAACCAGGTGTGCAC...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTGCCTGGCGAACGTGGTaGAACCCTGTCTCTACTAAA | + |
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Preference number: 2 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGAWRTW*NPVSTK Trigger: TTTAGTAGAGACAGGGTTTCACCACGTTCGCCAGGC...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACAGAAACATCGCTGACTaGTGCGGCCTCTACGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: GCLPSLFFPFHCFSANQHRNIAD*CGLYVS Trigger: TGAAACGTAGAGGCCGCAGCAGTCAGCGATGTTTCT...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACTGCACTCCTCCAGCCTaGACAAGAGTTAAGACCCTA | + |
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Preference number: 2 (lower is better) Translates to: GCLPSLFFPFHCFSANQHCTPPA*TRVKTL Trigger: TAGGGTCTTAACTCTTGTCCAGGCTGGAGGAGTGCA...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR GCA 90 bp | TCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACATGTAAGTGCCTCTCTGCAGTGAGCCAAGATTaGGCCATTGCATCCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: SSSHSTALVPISTCKCLSAVSQD*AIASWA Trigger: TGCCCAGGATGCAATGGCGCAATCTTGGCTCACTGC...AGAGAGGCACTTACATGTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACATGTAAGTGCCTCTCTTGCGCCATTGCATCCTaGGCAACACAGCCAGACTCT | + |
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Preference number: 2 (lower is better) Translates to: SSSHSTALVPISTCKCLSCAIAS*ATQPDS Trigger: AGAGTCTGGCTGTGTTGCCCAGGATGCAATGGCGCA...AGAGAGGCACTTACATGTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR GCA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTATACAGCAAATGGGCTaGAGTGAACAGTGCACACCT | + |
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Preference number: 2 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGIQQMG*SEQCTP Trigger: AGGTGTGCACTGTTCACTGCAGCCCATTTGCTGTAT...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACATGTAAGTGCCTCTCTTTATGCCTGGGGATGTaGTTTCTCCGAGCAGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: SSSHSTALVPISTCKCLSLCLGM*FLRAAV Trigger: CACTGCTGCTCGGAGAAACCACATCCCCAGGCATAA...AGAGAGGCACTTACATGTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTAAAATTAGCCAGGCGTaGTGGCAGGTACCTGTAATC | + |
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Preference number: 2 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGKISQA*WQVPVI Trigger: GATTACAGGTACCTGCCACCACGCCTGGCTAATTTT...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTGGGGTTTCTCCATGTTaGTCAGGATGGTCTCAAACT | + |
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Preference number: 2 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGGVSPC*SGWSQT Trigger: AGTTTGAGACCATCCTGACCAACATGGAGAAACCCC...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR GCA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTTTCTTCCCATTCCACTaGTTTAGTGCCAATCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGFFPFH*FSANQH Trigger: GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAA...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACATGTAAGTGCCTCTCTAAAAAGATTGGCCGGTaGCTCACGCCTGTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: SSSHSTALVPISTCKCLSKKIGR*LTPVIP Trigger: TGGGATTACAGGCGTGAGCCACCGGCCAATCTTTTT...AGAGAGGCACTTACATGTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR CAA 90 bp | AGAAAGCCGCCCTTGCCAGACACTGAACGTACCAGCACCTGGATCTaGCATTTGCCAGCCTCCAAAACTGTGAGAAATAAATTCCTATTA | + |
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Preference number: 2 (lower is better) Translates to: RKPPLPDTERTSTWI*HLPASKTVRNKFLL Trigger: TAATAGGAATTTATTTCTCACAGTTTTGGAGGCTGGCAAATGCAAGATCCAGGTGCTGGTACGTTCAGTGTCTGGCAAGGGCGGCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTACTAGCTCATCTGCCTaGGATGCTAAGAATAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGTSSSA*DAKNSE Trigger: TTCACTATTCTTAGCATCTCAGGCAGATGAGCTAGT...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR GCA 90 bp | TCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACATGTAAGTGCCTCTCTACAGAGTCAAGCAAGTaGCCCAAAGAAAAACCCCAA | + |
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Preference number: 2 (lower is better) Translates to: SSSHSTALVPISTCKCLSTESSK*PKEKPQ Trigger: TTGGGGTTTTTCTTTGGGGCACTTGCTTGACTCTGT...AGAGAGGCACTTACATGTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR CCA 90 bp | CTAGCTCATCTGCCTGAGATGCTAAGAATAGTGAACATTTACTGGAACATACTAGTCAGCCCCAGACAGTaGGAAGGTGGTGTTATGCCT | + |
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Preference number: 2 (lower is better) Translates to: LAHLPEMLRIVNIYWNILVSPRQ*EGGVMP Trigger: AGGCATAACACCACCTTCCCACTGTCTGGGGCTGAC...TAGTATGTTCCAGTAAATGTTCACTATTCTTAGCATCTCAGGCAGATGAGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR CAA 90 bp | CATATTTCACAATTGAGAACACCAATGAGGCTCAAAGAAGCGAAGTaGCTCAAGGATAAAAAGATTGGCCGGTGGCTCACGCCTGTAATC | + |
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Preference number: 2 (lower is better) Translates to: HISQLRTPMRLKEAK*LKDKKIGRWLTPVI Trigger: GATTACAGGCGTGAGCCACCGGCCAATCTTTTTATCCTTGAGCAACTTCGCTTCTTTGAGCCTCATTGGTGTTCTCAATTGTGAAATATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR CAA 90 bp | CCGCCCTTGCCAGACACTGAACGTACCAGCACCTGGATCTTGCATTaGCCAGCCTCCAAAACTGTGAGAAATAAATTCCTATTATTTATA | + |
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Preference number: 2 (lower is better) Translates to: PPLPDTERTSTWILH*PASKTVRNKFLLFI Trigger: TATAAATAATAGGAATTTATTTCTCACAGTTTTGGAGGCTGGCAAATGCAAGATCCAGGTGCTGGTACGTTCAGTGTCTGGCAAGGGCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR TCA 90 bp | AATTGTGCAAGGTCTCCTAATAGCTATTTTTCAATAGCAATATGCTGTCCAGCCGGCAGGAGAATCACTTaGACCCAGAAGGCAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: NCARSPNSYFSIAICCPAGRRIT*TQKAEV Trigger: AACCTCTGCCTTCTGGGTTCAAGTGATTCTCCTGCC...GGCTGGACAGCATATTGCTATTGAAAAATAGCTATTAGGAGACCTTGCACAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR CCA 90 bp | CTAGCTCATCTGCCTGAGATGCTAAGAATAGTGAACATTTACTGGAACATACTAAGGTGGTGTTATGCCTaGGGATGTGGTTTCTCCGAG | + |
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Preference number: 2 (lower is better) Translates to: LAHLPEMLRIVNIYWNILRWCYA*GCGFSE Trigger: CTCGGAGAAACCACATCCCCAGGCATAACACCACCT...TAGTATGTTCCAGTAAATGTTCACTATTCTTAGCATCTCAGGCAGATGAGCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACATGTAAGTGCCTCTCTAGATTCCATGTCACCTaGGCCTGTGAGTTATTTGAA | + |
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Preference number: 2 (lower is better) Translates to: SSSHSTALVPISTCKCLSRFHVT*ACELFE Trigger: TTCAAATAACTCACAGGCCCAGGTGACATGGAATCT...AGAGAGGCACTTACATGTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTTTCTCAAAATACCCATaGGGCAGATACTATTATCCA | + |
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Preference number: 2 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGFSKYP*GRYYYP Trigger: TGGATAATAGTATCTGCCCCATGGGTATTTTGAGAA...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR GCA 90 bp | CTAGCTCATCTGCCTGAGATGCTAAGAATAGTGAACATTTACTGGAACATACTAACAACGATGCCAAGGTaGTGTCATCGACACTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: LAHLPEMLRIVNIYWNILTTMPR*CHRHSH Trigger: ATGGGAGTGTCGATGACAGCACCTTGGCATCGTTGT...TAGTATGTTCCAGTAAATGTTCACTATTCTTAGCATCTCAGGCAGATGAGCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR CCA 90 bp | AATTGTGCAAGGTCTCCTAATAGCTATTTTTCAATAGCAATATGCTGTCCAGCCACAGAGAAGACAGCATaGCCACTGCCCAAGAATGAC | + |
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Preference number: 2 (lower is better) Translates to: NCARSPNSYFSIAICCPATEKTA*PLPKND Trigger: GTCATTCTTGGGCAGTGGCCATGCTGTCTTCTCTGT...GGCTGGACAGCATATTGCTATTGAAAAATAGCTATTAGGAGACCTTGCACAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTCACATATACCCAAATTaGAACAATACAGAGAAGACA | + |
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Preference number: 2 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGHIYPN*NNTEKT Trigger: TGTCTTCTCTGTATTGTTCCAATTTGGGTATATGTG...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR TCA 90 bp | TCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACATGTAAGTGCCTCTCTTTTATTTTCCAAGTCTaGTACTATCAGTTGGTAGGC | + |
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Preference number: 2 (lower is better) Translates to: SSSHSTALVPISTCKCLSFIFQV*YYQLVG Trigger: GCCTACCAACTGATAGTATCAGACTTGGAAAATAAA...AGAGAGGCACTTACATGTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR-3UTR GCA 90 bp | CTAGCTCATCTGCCTGAGATGCTAAGAATAGTGAACATTTACTGGAACATACTACACAGGCGTCAAGGATaGTCATTTCAGAAACATCGC | + |
|
Preference number: 2 (lower is better) Translates to: LAHLPEMLRIVNIYWNILHRRQG*SFQKHR Trigger: GCGATGTTTCTGAAATGAGCATCCTTGACGCCTGTG...TAGTATGTTCCAGTAAATGTTCACTATTCTTAGCATCTCAGGCAGATGAGCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR CAA 90 bp | TCTCAAAATACCCATGGGGCAGATACTATTATCCATATTTCACAATaGAGAACACCAATGAGGCTCAAAGAAGCGAAGTTGCTCAAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: SQNTHGADTIIHISQ*RTPMRLKEAKLLKD Trigger: ATCCTTGAGCAACTTCGCTTCTTTGAGCCTCATTGGTGTTCTCAATTGTGAAATATGGATAATAGTATCTGCCCCATGGGTATTTTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR-3UTR TCA 90 bp | AATTGTGCAAGGTCTCCTAATAGCTATTTTTCAATAGCAATATGCTGTCCAGCCATTTTAAAAATTAGCTaGGAGTTGTGGTGCACACCT | + |
|
Preference number: 2 (lower is better) Translates to: NCARSPNSYFSIAICCPAILKIS*ELWCTP Trigger: AGGTGTGCACCACAACTCTCAGCTAATTTTTAAAAT...GGCTGGACAGCATATTGCTATTGAAAAATAGCTATTAGGAGACCTTGCACAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR TCA 72 bp | GTGGTGCACACCTGTGGCCCCAGTTATTTGGGAGGCTaGGGCAGCGGGGTCAAGACTTCAGTGAGCCATGAC | + |
|
Preference number: 3 (lower is better) Translates to: VVHTCGPSYLGG*GSGVKTSVSHD Trigger: GTCATGGCTCACTGAAGTCTTGACCCCGCTGCCTCAGCCTCCCAAATAACTGGGGCCACAGGTGTGCACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000272645.9 ENST00000409955.1 |
||
| 3UTR TCA 72 bp | AGGCTGAGGCAGCGGGGTCAAGACTTCAGTGAGCCATaGCTGTACGACTGCACTCCTCCAGCCTGGACAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RLRQRGQDFSEP*LYDCTPPAWTR Trigger: TCTTGTCCAGGCTGGAGGAGTGCAGTCGTACAGTCATGGCTCACTGAAGTCTTGACCCCGCTGCCTCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000272645.9 ENST00000409955.1 |
||
| 3UTR TCA 72 bp | ATTTGGGAGGCTGAGGCAGCGGGGTCAAGACTTCAGTaGGCCATGACTGTACGACTGCACTCCTCCAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: IWEAEAAGSRLQ*AMTVRLHSSSL Trigger: CAGGCTGGAGGAGTGCAGTCGTACAGTCATGGCTCACTGAAGTCTTGACCCCGCTGCCTCAGCCTCCCAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000272645.9 ENST00000409955.1 |
||
| 3UTR TCA 72 bp | GTAGCTCGTGCCTGTGGTCCCAGCTATCCAAGAGGCTaGGGTGGGATGATCGCTGGAGAGTGGGAGATTGAG | + |
|
Preference number: 3 (lower is better) Translates to: VARACGPSYPRG*GGMIAGEWEIE Trigger: CTCAATCTCCCACTCTCCAGCGATCATCCCACCTCAGCCTCTTGGATAGCTGGGACCACAGGCACGAGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR CCA 72 bp | AGCACCGTGCTCCTCAGTTGCCATCTAGCACACGCCTaGATCGTCTGGGCTGCCTTCCAAGTCTCTTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: STVLLSCHLAHA*IVWAAFQVSSS Trigger: GGAAGAAGAGACTTGGAAGGCAGCCCAGACGATCCAGGCGTGTGCTAGATGGCAACTGAGGAGCACGGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR CCA 72 bp | CTCCTCAGTTGCCATCTAGCACACGCCTGGATCGTCTaGGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: LLSCHLAHAWIV*AAFQVSSSHST Trigger: AGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCCCAGACGATCCAGGCGTGTGCTAGATGGCAACTGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR GCA 72 bp | CAGTTGCCATCTAGCACACGCCTGGATCGTCTGGGCTaGCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QLPSSTRLDRLG*LPSLFFPFHCF Trigger: AAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCCCAGACGATCCAGGCGTGTGCTAGATGGCAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACACAGTGCACACCTGGTaGTGGACCTCTTTGGCACGA | + |
|
Preference number: 3 (lower is better) Translates to: GCLPSLFFPFHCFSANQHTVHTW*WTSLAR Trigger: TCGTGCCAAAGAGGTCCACAACCAGGTGTGCACTGT...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTTACAATGGTGCAATCTaGGCTCGCCACCCCCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGYNGAI*ARHPLC Trigger: GCAGAGGGGGTGGCGAGCCAAGATTGCACCATTGTA...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACTCTGCAGTACTCACTTaGGCAGCACATATACCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GCLPSLFFPFHCFSANQHSAVLT*AAHIPK Trigger: TTTGGGTATATGTGCTGCCAAAGTGAGTACTGCAGA...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTCAAATAAAGCACTTATaGCTAATTAGCAGGCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGQIKHL*LISRPE Trigger: CTCTGGCCTGCTAATTAGCAATAAGTGCTTTATTTG...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTATCCATATTTCACAATaGAGAACACCAATGAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGIHISQ*RTPMRL Trigger: GAGCCTCATTGGTGTTCTCAATTGTGAAATATGGAT...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTGCACATATACCCAAATaGGAACAATACAGAGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGAHIPK*EQYRED Trigger: GTCTTCTCTGTATTGTTCCAATTTGGGTATATGTGC...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR CCA 72 bp | TATACTTCAGTATTCTCAGGTAGCTCACAGAACCCCTaGCACATAGGTGGAAACACCAGTAAAGATGGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: YTSVFSGSSQNP*HIGGNTSKDGS Trigger: GCTACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGAGAATACTGAAGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR-3UTR CAA 90 bp | AATTGTGCAAGGTCTCCTAATAGCTATTTTTCAATAGCAATATGCTGTCCAGCCCGGGGTTTCTCCATGTaGGTCAGGATGGTCTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: NCARSPNSYFSIAICCPARGFSM*VRMVSN Trigger: GTTTGAGACCATCCTGACCAACATGGAGAAACCCCG...GGCTGGACAGCATATTGCTATTGAAAAATAGCTATTAGGAGACCTTGCACAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR-3UTR CAA 90 bp | CTAGCTCATCTGCCTGAGATGCTAAGAATAGTGAACATTTACTGGAACATACTATTAGTAGCCTTGTCATaGGGCACACAACAACCACAG | + |
|
Preference number: 3 (lower is better) Translates to: LAHLPEMLRIVNIYWNILLVALS*GTQQPQ Trigger: CTGTGGTTGTTGTGTGCCCAATGACAAGGCTACTAA...TAGTATGTTCCAGTAAATGTTCACTATTCTTAGCATCTCAGGCAGATGAGCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACATGTAAGTGCCTCTCTCTCAAAGAAGCGAAGTaGCTCAAGGATAAAAAGATT | + |
|
Preference number: 3 (lower is better) Translates to: SSSHSTALVPISTCKCLSLKEAK*LKDKKI Trigger: AATCTTTTTATCCTTGAGCAACTTCGCTTCTTTGAG...AGAGAGGCACTTACATGTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR TCA 72 bp | AATAGCAATATGCTGTCCAGCCCTGTAAACAATTTTTaGCTGTCTTGCAGAATAGCTGACCAGGCTTTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: NSNMLSSPVNNF*LSCRIADQAFN Trigger: GTTGAAAGCCTGGTCAGCTATTCTGCAAGACAGTCAAAAATTGTTTACAGGGCTGGACAGCATATTGCTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR CCA 72 bp | ATATACCCAAATTGGAACAATACAGAGAAGACAGCATaGCCACTGCCCAAGAATGACATGCAAATTCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: IYPNWNNTEKTA*PLPKNDMQIHQ Trigger: TTGATGAATTTGCATGTCATTCTTGGGCAGTGGCCATGCTGTCTTCTCTGTATTGTTCCAATTTGGGTATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR TCA 72 bp | TTTATTAACAGTATTACTAAGGCAACTCATCGATGCTaGAGTCCCATCCAGTATGCTATTTTTCATGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: FINSITKATHRC*SPIQYAIFHAS Trigger: TGAGGCATGAAAAATAGCATACTGGATGGGACTTCAGCATCGATGAGTTGCCTTAGTAATACTGTTAATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR TCA 72 bp | TTCAGAAAGACTTATCTGGTTAATTTAGCTTTCTGGTaGAGTGAGGGTTTGACAACCTATCTTTTTGTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: FRKTYLVNLAFW*SEGLTTYLFVV Trigger: TACAACAAAAAGATAGGTTGTCAAACCCTCACTTCACCAGAAAGCTAAATTAACCAGATAAGTCTTTCTGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR TCA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACACTTCTGACCTCTGGTaGTCCACCCGCCTCGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GCLPSLFFPFHCFSANQHTSDLW*STRLGL Trigger: GAGGCCGAGGCGGGTGGATCACCAGAGGTCAGAAGT...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR CCA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACGTGGCCCCAGTTATTTaGGAGGCTGAGGCAGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GCLPSLFFPFHCFSANQHVAPVI*EAEAAG Trigger: CCCCGCTGCCTCAGCCTCCCAAATAACTGGGGCCAC...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR TCA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTCTAGATGCTATGGTCTaGATGTGCCCCCTCCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGLDAMV*MCPLPP Trigger: GGGTGGGAGGGGGCACATTCAGACCATAGCATCTAG...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTCATCTAGCACACGCCTaGATCGTCTGGGCTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGHLAHA*IVWAAF Trigger: GAAGGCAGCCCAGACGATCCAGGCGTGTGCTAGATG...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTGCAGTGAGCCAAGATTaGGCCATTGCATCCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGAVSQD*AIASWA Trigger: TGCCCAGGATGCAATGGCGCAATCTTGGCTCACTGC...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR CCA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACATGATCGCTGGAGAGTaGGAGATTGAGGCTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GCLPSLFFPFHCFSANQHMIAGE*EIEAAV Trigger: CACTGCAGCCTCAATCTCCCACTCTCCAGCGATCAT...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CCA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACGGAGGCGGAAACAGGTaGACTGCTAGAGGTCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GCLPSLFFPFHCFSANQHGGGNR*TARGQK Trigger: TTTCTGACCTCTAGCAGTCCACCTGTTTCCGCCTCC...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR TCA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACGCAACTCATCGATGCTaGAGTCCCATCCAGTATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GCLPSLFFPFHCFSANQHATHRC*SPIQYA Trigger: AGCATACTGGATGGGACTTCAGCATCGATGAGTTGC...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR GCA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTCCTTATAAAAGAGGCTaGGGGCTGGGTGCAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGPYKRG*GLGAVT Trigger: AGTCACTGCACCCAGCCCGCAGCCTCTTTTATAAGG...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR CCA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACACAGAGAAGACAGCATaGCCACTGCCCAAGAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: GCLPSLFFPFHCFSANQHTEKTA*PLPKND Trigger: GTCATTCTTGGGCAGTGGCCATGCTGTCTTCTCTGT...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR TCA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACAGATTGAGGCTGCAGTaGACCTTAATCATGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GCLPSLFFPFHCFSANQHRLRLQ*TLIMPL Trigger: CAGTGGCATGATTAAGGTTCACTGCAGCCTCAATCT...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR GCA 90 bp | TCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACATGTAAGTGCCTCTCTGCTGGAGTACAATGGTaGAATCTTGGCTCGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSHSTALVPISTCKCLSAGVQW*NLGSPP Trigger: GGGTGGCGAGCCAAGATTGCACCATTGTACTCCAGC...AGAGAGGCACTTACATGTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR GCA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACACAGAGTCAAGCAAGTaGCCCAAAGAAAAACCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GCLPSLFFPFHCFSANQHTESSK*PKEKPQ Trigger: TTGGGGTTTTTCTTTGGGGCACTTGCTTGACTCTGT...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR CCA 90 bp | TCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACATGTAAGTGCCTCTCTGAACGTACCAGCACCTaGATCTTGCATTTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSHSTALVPISTCKCLSERTST*ILHLPA Trigger: GGCTGGCAAATGCAAGATCCAGGTGCTGGTACGTTC...AGAGAGGCACTTACATGTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| 3UTR CAA 72 bp | CCCTTGCCAGACACTGAACGTACCAGCACCTGGATCTaGCATTTGCCAGCCTCCAAAACTGTGAGAAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLPDTERTSTWI*HLPASKTVRNK Trigger: TTTATTTCTCACAGTTTTGGAGGCTGGCAAATGCAAGATCCAGGTGCTGGTACGTTCAGTGTCTGGCAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR TCA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACGCCAACTCAAACTTATaGAGCTTTTTCTGGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GCLPSLFFPFHCFSANQHANSNL*SFFWSS Trigger: GCTACTCCAGAAAAAGCTTCATAAGTTTGAGTTGGC...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR TCA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTAGCTTTCTGGTGAAGTaGGGGTTTGACAACCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGSFLVK*GFDNLS Trigger: AGATAGGTTGTCAAACCCTCACTTCACCAGAAAGCT...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR GCA 90 bp | CTAGCTCATCTGCCTGAGATGCTAAGAATAGTGAACATTTACTGGAACATACTAGCTCGCCACCCCCTCTaGCTCCCAGGTTCAAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LAHLPEMLRIVNIYWNILARHPL*LPGSSN Trigger: ATTGCTTGAACCTGGGAGGCAGAGGGGGTGGCGAGC...TAGTATGTTCCAGTAAATGTTCACTATTCTTAGCATCTCAGGCAGATGAGCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR GCA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACAAGTCCCATCCAGTATaGTATTTTTCATGCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GCLPSLFFPFHCFSANQHKSHPV*YFSCLR Trigger: CCTGAGGCATGAAAAATAGCATACTGGATGGGACTT...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR CCA 90 bp | TCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACATGTAAGTGCCTCTCTTGCACTCCTCCAGCCTaGACAAGAGTTAAGACCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SSSHSTALVPISTCKCLSCTPPA*TRVKTL Trigger: TAGGGTCTTAACTCTTGTCCAGGCTGGAGGAGTGCA...AGAGAGGCACTTACATGTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR CCA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTGCCCGCCACCACACGTaGCCAATTTTTGTATTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGARHHT*PIFVFL Trigger: TAAAAATACAAAAATTGGCCACGTGTGGTGGCGGGC...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR TCA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACCAGGTGATTAAGTCATaGGAGAATATCCCTCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: GCLPSLFFPFHCFSANQHQVIKS*ENIPHE Trigger: TTCATGAGGGATATTCTCTCATGACTTAATCACCTG...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR CCA 90 bp | TCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACATGTAAGTGCCTCTCTAAAATTAGCCAGGCGTaGTGGCAGGTACCTGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: SSSHSTALVPISTCKCLSKISQA*WQVPVI Trigger: GATTACAGGTACCTGCCACCACGCCTGGCTAATTTT...AGAGAGGCACTTACATGTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
||
| CDS-3UTR CCA 90 bp | AATTGTGCAAGGTCTCCTAATAGCTATTTTTCAATAGCAATATGCTGTCCAGCCACAATGGTGCAATCTTaGCTCGCCACCCCCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NCARSPNSYFSIAICCPATMVQS*LATPSA Trigger: GGCAGAGGGGGTGGCGAGCCAAGATTGCACCATTGT...GGCTGGACAGCATATTGCTATTGAAAAATAGCTATTAGGAGACCTTGCACAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CCA 90 bp | AATTGTGCAAGGTCTCCTAATAGCTATTTTTCAATAGCAATATGCTGTCCAGCCGGTAGCTCGTGCCTGTaGTCCCAGCTATCCAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: NCARSPNSYFSIAICCPAGSSCL*SQLSKR Trigger: CCTCTTGGATAGCTGGGACCACAGGCACGAGCTACC...GGCTGGACAGCATATTGCTATTGAAAAATAGCTATTAGGAGACCTTGCACAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR CAA 72 bp | CAATTGAGAACACCAATGAGGCTCAAAGAAGCGAAGTaGCTCAAGGATAAAAAGATTGGCCGGTGGCTCACG | + |
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Preference number: 4 (lower is better) Translates to: QLRTPMRLKEAK*LKDKKIGRWLT Trigger: CGTGAGCCACCGGCCAATCTTTTTATCCTTGAGCAACTTCGCTTCTTTGAGCCTCATTGGTGTTCTCAATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR TCA 90 bp | AATTGTGCAAGGTCTCCTAATAGCTATTTTTCAATAGCAATATGCTGTCCAGCCAGGAAAGATGAGCTGTaGGGCGTCCTCCTCTACGTC | + |
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Preference number: 4 (lower is better) Translates to: NCARSPNSYFSIAICCPARKDEL*GVLLYV Trigger: GACGTAGAGGAGGACGCCTCACAGCTCATCTTTCCT...GGCTGGACAGCATATTGCTATTGAAAAATAGCTATTAGGAGACCTTGCACAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CCA 90 bp | CTAGCTCATCTGCCTGAGATGCTAAGAATAGTGAACATTTACTGGAACATACTATGCGCCATTGCATCCTaGGCAACACAGCCAGACTCT | + |
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Preference number: 4 (lower is better) Translates to: LAHLPEMLRIVNIYWNILCAIAS*ATQPDS Trigger: AGAGTCTGGCTGTGTTGCCCAGGATGCAATGGCGCA...TAGTATGTTCCAGTAAATGTTCACTATTCTTAGCATCTCAGGCAGATGAGCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CCA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACTTCTCAAAATACCCATaGGGCAGATACTATTATCCA | + |
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Preference number: 4 (lower is better) Translates to: GCLPSLFFPFHCFSANQHFSKYP*GRYYYP Trigger: TGGATAATAGTATCTGCCCCATGGGTATTTTGAGAA...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| 3UTR CAA 72 bp | CCAGACACTGAACGTACCAGCACCTGGATCTTGCATTaGCCAGCCTCCAAAACTGTGAGAAATAAATTCCTA | + |
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Preference number: 4 (lower is better) Translates to: PDTERTSTWILH*PASKTVRNKFL Trigger: TAGGAATTTATTTCTCACAGTTTTGGAGGCTGGCAAATGCAAGATCCAGGTGCTGGTACGTTCAGTGTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR TCA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTATTTTAAAAATTAGCTaGGAGTTGTGGTGCACACCT | + |
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Preference number: 4 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGILKIS*ELWCTP Trigger: AGGTGTGCACCACAACTCTCAGCTAATTTTTAAAAT...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR TCA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTTTTATTTTCCAAGTCTaGTACTATCAGTTGGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGFIFQV*YYQLVG Trigger: GCCTACCAACTGATAGTATCAGACTTGGAAAATAAA...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR TCA 90 bp | TCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACATGTAAGTGCCTCTCTAATTTAGCTTTCTGGTaGAGTGAGGGTTTGACAACC | + |
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Preference number: 4 (lower is better) Translates to: SSSHSTALVPISTCKCLSNLAFW*SEGLTT Trigger: GGTTGTCAAACCCTCACTTCACCAGAAAGCTAAATT...AGAGAGGCACTTACATGTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR GCA 90 bp | AATTGTGCAAGGTCTCCTAATAGCTATTTTTCAATAGCAATATGCTGTCCAGCCCTGGATCGTCTGGGCTaGCTTCCAAGTCTCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: NCARSPNSYFSIAICCPALDRLG*LPSLFF Trigger: GAAGAAGAGACTTGGAAGGCAGCCCAGACGATCCAG...GGCTGGACAGCATATTGCTATTGAAAAATAGCTATTAGGAGACCTTGCACAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CCA 90 bp | CTAGCTCATCTGCCTGAGATGCTAAGAATAGTGAACATTTACTGGAACATACTATTATGCCTGGGGATGTaGTTTCTCCGAGCAGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LAHLPEMLRIVNIYWNILLCLGM*FLRAAV Trigger: CACTGCTGCTCGGAGAAACCACATCCCCAGGCATAA...TAGTATGTTCCAGTAAATGTTCACTATTCTTAGCATCTCAGGCAGATGAGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CCA 90 bp | AATTGTGCAAGGTCTCCTAATAGCTATTTTTCAATAGCAATATGCTGTCCAGCCAGGTGGTGTTATGCCTaGGGATGTGGTTTCTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: NCARSPNSYFSIAICCPARWCYA*GCGFSE Trigger: CTCGGAGAAACCACATCCCCAGGCATAACACCACCT...GGCTGGACAGCATATTGCTATTGAAAAATAGCTATTAGGAGACCTTGCACAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CCA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACCACATATACCCAAATTaGAACAATACAGAGAAGACA | + |
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Preference number: 4 (lower is better) Translates to: GCLPSLFFPFHCFSANQHHIYPN*NNTEKT Trigger: TGTCTTCTCTGTATTGTTCCAATTTGGGTATATGTG...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR GCA 90 bp | TCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACATGTAAGTGCCTCTCTCGCCCAACTGTGAGCTaGTTTTTAAATCTGCTTTTA | + |
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Preference number: 4 (lower is better) Translates to: SSSHSTALVPISTCKCLSRPTVS*FLNLLL Trigger: TAAAAGCAGATTTAAAAAGCAGCTCACAGTTGGGCG...AGAGAGGCACTTACATGTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR GCA 90 bp | AATTGTGCAAGGTCTCCTAATAGCTATTTTTCAATAGCAATATGCTGTCCAGCCCCAGCACCTGGATCTTaGATTTGCCAGCCTCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: NCARSPNSYFSIAICCPAPAPGS*ICQPPK Trigger: TTTTGGAGGCTGGCAAATGCAAGATCCAGGTGCTGG...GGCTGGACAGCATATTGCTATTGAAAAATAGCTATTAGGAGACCTTGCACAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CCA 90 bp | CTAGCTCATCTGCCTGAGATGCTAAGAATAGTGAACATTTACTGGAACATACTAAAAAAGATTGGCCGGTaGCTCACGCCTGTAATCCCA | + |
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Preference number: 4 (lower is better) Translates to: LAHLPEMLRIVNIYWNILKKIGR*LTPVIP Trigger: TGGGATTACAGGCGTGAGCCACCGGCCAATCTTTTT...TAGTATGTTCCAGTAAATGTTCACTATTCTTAGCATCTCAGGCAGATGAGCTAG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR TCA 90 bp | TCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACATGTAAGTGCCTCTCTCTTGATAAATACCACTaGTTAGTGCCTAACTATGTG | + |
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Preference number: 4 (lower is better) Translates to: SSSHSTALVPISTCKCLSLDKYH*LVPNYV Trigger: CACATAGTTAGGCACTAATCAGTGGTATTTATCAAG...AGAGAGGCACTTACATGTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR TCA 90 bp | AATTGTGCAAGGTCTCCTAATAGCTATTTTTCAATAGCAATATGCTGTCCAGCCGTCTTGCAGAATAGCTaGCCAGGCTTTCAACCTACA | + |
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Preference number: 4 (lower is better) Translates to: NCARSPNSYFSIAICCPAVLQNS*PGFQPT Trigger: TGTAGGTTGAAAGCCTGGTCAGCTATTCTGCAAGAC...GGCTGGACAGCATATTGCTATTGAAAAATAGCTATTAGGAGACCTTGCACAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR GCA 90 bp | CTAGCTCATCTGCCTGAGATGCTAAGAATAGTGAACATTTACTGGAACATACTAATACAGCAAATGGGCTaGAGTGAACAGTGCACACCT | + |
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Preference number: 4 (lower is better) Translates to: LAHLPEMLRIVNIYWNILIQQMG*SEQCTP Trigger: AGGTGTGCACTGTTCACTGCAGCCCATTTGCTGTAT...TAGTATGTTCCAGTAAATGTTCACTATTCTTAGCATCTCAGGCAGATGAGCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR TCA 90 bp | AATTGTGCAAGGTCTCCTAATAGCTATTTTTCAATAGCAATATGCTGTCCAGCCCAACCTACAACAGCATaGGGTTGCTTTACCAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: NCARSPNSYFSIAICCPAQPTTA*GCFTKF Trigger: GAACTTGGTAAAGCAACCTCATGCTGTTGTAGGTTG...GGCTGGACAGCATATTGCTATTGAAAAATAGCTATTAGGAGACCTTGCACAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR GCA 90 bp | CTAGCTCATCTGCCTGAGATGCTAAGAATAGTGAACATTTACTGGAACATACTATTCTTCCCATTCCACTaGTTTAGTGCCAATCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: LAHLPEMLRIVNIYWNILFFPFH*FSANQH Trigger: GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAA...TAGTATGTTCCAGTAAATGTTCACTATTCTTAGCATCTCAGGCAGATGAGCTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR TCA 90 bp | CTAGCTCATCTGCCTGAGATGCTAAGAATAGTGAACATTTACTGGAACATACTAACTAGCTCATCTGCCTaGGATGCTAAGAATAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: LAHLPEMLRIVNIYWNILTSSSA*DAKNSE Trigger: TTCACTATTCTTAGCATCTCAGGCAGATGAGCTAGT...TAGTATGTTCCAGTAAATGTTCACTATTCTTAGCATCTCAGGCAGATGAGCTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR TCA 90 bp | AATTGTGCAAGGTCTCCTAATAGCTATTTTTCAATAGCAATATGCTGTCCAGCCCCTGTAAACAATTTTTaGCTGTCTTGCAGAATAGCT | + |
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Preference number: 4 (lower is better) Translates to: NCARSPNSYFSIAICCPAPVNNF*LSCRIA Trigger: AGCTATTCTGCAAGACAGTCAAAAATTGTTTACAGG...GGCTGGACAGCATATTGCTATTGAAAAATAGCTATTAGGAGACCTTGCACAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CAA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACCACCGTGCTCCTCAGTaGCCATCTAGCACACGCCTG | + |
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Preference number: 5 (lower is better) Translates to: GCLPSLFFPFHCFSANQHHRAPQ*PSSTRL Trigger: CAGGCGTGTGCTAGATGGCAACTGAGGAGCACGGTG...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CAA 90 bp | TCAGGTAGCTCACAGAACCCCTGGCACATAGGTGGAAACACCAGTAAAGATGGTTTAGTAGCCTTGTCATaGGGCACACAACAACCACAG | + |
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Preference number: 5 (lower is better) Translates to: SGSSQNPWHIGGNTSKDGLVALS*GTQQPQ Trigger: CTGTGGTTGTTGTGTGCCCAATGACAAGGCTACTAA...ACCATCTTTACTGGTGTTTCCACCTATGTGCCAGGGGTTCTGTGAGCTACCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CAA 90 bp | TCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACATGTAAGTGCCTCTCTACCTGGATCTTGCATTaGCCAGCCTCCAAAACTGTG | + |
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Preference number: 5 (lower is better) Translates to: SSSHSTALVPISTCKCLSTWILH*PASKTV Trigger: CACAGTTTTGGAGGCTGGCAAATGCAAGATCCAGGT...AGAGAGGCACTTACATGTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CAA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACCAAATAAAGCACTTATaGCTAATTAGCAGGCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: GCLPSLFFPFHCFSANQHQIKHL*LISRPE Trigger: CTCTGGCCTGCTAATTAGCAATAAGTGCTTTATTTG...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CAA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACATCCATATTTCACAATaGAGAACACCAATGAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: GCLPSLFFPFHCFSANQHIHISQ*RTPMRL Trigger: GAGCCTCATTGGTGTTCTCAATTGTGAAATATGGAT...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CAA 90 bp | CTAGCTCATCTGCCTGAGATGCTAAGAATAGTGAACATTTACTGGAACATACTATACAATGGTGCAATCTaGGCTCGCCACCCCCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: LAHLPEMLRIVNIYWNILYNGAI*ARHPLC Trigger: GCAGAGGGGGTGGCGAGCCAAGATTGCACCATTGTA...TAGTATGTTCCAGTAAATGTTCACTATTCTTAGCATCTCAGGCAGATGAGCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CAA 90 bp | AATTGTGCAAGGTCTCCTAATAGCTATTTTTCAATAGCAATATGCTGTCCAGCCACCAGAAAGCCGCCCTaGCCAGACACTGAACGTACC | + |
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Preference number: 5 (lower is better) Translates to: NCARSPNSYFSIAICCPATRKPP*PDTERT Trigger: GGTACGTTCAGTGTCTGGCAAGGGCGGCTTTCTGGT...GGCTGGACAGCATATTGCTATTGAAAAATAGCTATTAGGAGACCTTGCACAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CAA 90 bp | CTAGCTCATCTGCCTGAGATGCTAAGAATAGTGAACATTTACTGGAACATACTAACCGTCCCTCCAAGCTaGGGATTAGAGCCTTGGACT | + |
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Preference number: 5 (lower is better) Translates to: LAHLPEMLRIVNIYWNILTVPPS*GLEPWT Trigger: AGTCCAAGGCTCTAATCCCAAGCTTGGAGGGACGGT...TAGTATGTTCCAGTAAATGTTCACTATTCTTAGCATCTCAGGCAGATGAGCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CAA 90 bp | AATTGTGCAAGGTCTCCTAATAGCTATTTTTCAATAGCAATATGCTGTCCAGCCACAGTGCACACCTGGTaGTGGACCTCTTTGGCACGA | + |
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Preference number: 5 (lower is better) Translates to: NCARSPNSYFSIAICCPATVHTW*WTSLAR Trigger: TCGTGCCAAAGAGGTCCACAACCAGGTGTGCACTGT...GGCTGGACAGCATATTGCTATTGAAAAATAGCTATTAGGAGACCTTGCACAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CAA 90 bp | GGCTGCCTTCCAAGTCTCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACCTCAAAGAAGCGAAGTaGCTCAAGGATAAAAAGATT | + |
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Preference number: 5 (lower is better) Translates to: GCLPSLFFPFHCFSANQHLKEAK*LKDKKI Trigger: AATCTTTTTATCCTTGAGCAACTTCGCTTCTTTGAG...GTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGAGACTTGGAAGGCAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CAA 90 bp | CTAGCTCATCTGCCTGAGATGCTAAGAATAGTGAACATTTACTGGAACATACTAACCAGCACCTGGATCTaGCATTTGCCAGCCTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LAHLPEMLRIVNIYWNILTSTWI*HLPASK Trigger: TTTGGAGGCTGGCAAATGCAAGATCCAGGTGCTGGT...TAGTATGTTCCAGTAAATGTTCACTATTCTTAGCATCTCAGGCAGATGAGCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CAA 90 bp | TCTTCTTCCCATTCCACTGCTTTAGTGCCAATCAGCACATGTAAGTGCCTCTCTCCCTGTAAACAATTTTaGACTGTCTTGCAGAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSHSTALVPISTCKCLSPCKQF*TVLQNS Trigger: GCTATTCTGCAAGACAGTCAAAAATTGTTTACAGGG...AGAGAGGCACTTACATGTGCTGATTGGCACTAAAGCAGTGGAATGGGAAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS-3UTR CAA 90 bp | CTAGCTCATCTGCCTGAGATGCTAAGAATAGTGAACATTTACTGGAACATACTAGCACATATACCCAAATaGGAACAATACAGAGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LAHLPEMLRIVNIYWNILAHIPK*EQYRED Trigger: GTCTTCTCTGTATTGTTCCAATTTGGGTATATGTGC...TAGTATGTTCCAGTAAATGTTCACTATTCTTAGCATCTCAGGCAGATGAGCTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000272645.9 |
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| CDS CAA 90 bp | CACAGGTCCCCGGAACTTCGCAGTTTATCACATAAAATAACCCAGTaGCCCAGGCGGTCCCTCCCAAGGCCATGGTCCCTCCCAAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: HRSPELRSLSHKITQ*PRRSLPRPWSLPRP Trigger: TGGCCTTGGGAGGGACCATGGCCTTGGGAGGGACCGCCTGGGCAACTGGGTTATTTTATGTGATAAACTGCGAAGTTCCGGGGACCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409698.1 |
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| CDS CAA 72 bp | CCGGAACTTCGCAGTTTATCACATAAAATAACCCAGTaGCCCAGGCGGTCCCTCCCAAGGCCATGGTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PELRSLSHKITQ*PRRSLPRPWSL Trigger: GAGGGACCATGGCCTTGGGAGGGACCGCCTGGGCAACTGGGTTATTTTATGTGATAAACTGCGAAGTTCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409698.1 |
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| CDS CAA 72 bp | GTCTCAGCTGTTTCAAACTCACCTGAGTGTCCGGCTTaGTTTATCTTTGACACAGGTCCCCGGAACTTCGCA | + |
|
Preference number: 6 (lower is better) Translates to: VSAVSNSPECPA*FIFDTGPRNFA Trigger: TGCGAAGTTCCGGGGACCTGTGTCAAAGATAAACAAAGCCGGACACTCAGGTGAGTTTGAAACAGCTGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409698.1 |
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| CDS CAA 72 bp | TTTCAAACTCACCTGAGTGTCCGGCTTTGTTTATCTTaGACACAGGTCCCCGGAACTTCGCAGTTTATCACA | + |
|
Preference number: 6 (lower is better) Translates to: FQTHLSVRLCLS*TQVPGTSQFIT Trigger: TGTGATAAACTGCGAAGTTCCGGGGACCTGTGTCAAAGATAAACAAAGCCGGACACTCAGGTGAGTTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409698.1 |
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