RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POLR2A (Homo sapiens)

Ensembl gene IDs: ENSG00000181222, ENSG00000284832

Ensembl transcript IDs: ENST00000572844.1, ENST00000573603.1, ENST00000574158.1, ENST00000575547.1, ENST00000576114.1, ENST00000576553.1, ENST00000576718.1, ENST00000576952.1, ENST00000617998.6, ENST00000643490.2, ENST00000645939.2, ENST00000674977.2

Found 785 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGGTaGCGCCCCGTGAGGGAGGCAAGAACTGCACAGCAGCACGGGCAA +
Preference number: 1 (lower is better)
Translates to: SSATRHLCTTELGWG*RPVREARTAQQHGQ
Trigger: TTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCTCACGGGGCGTCACCCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
3UTR GCA 90 bp AAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTaGCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGGTGACG +
Preference number: 1 (lower is better)
Translates to: KSLHQKRDPEVHREL*HKAFMYNGAGLGVT
Trigger: CGTCACCCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
3UTR-3UTR CCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGAACGGGCAAGCTGCCCTaGGCCCTAGCCCGCTGCCGC +
Preference number: 2 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGTGKLP*ALARCR
Trigger: GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGT...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
3UTR-3UTR CCA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTAACGGGCAAGCTGCCCTaGGCCCTAGCCCGCTGCCGC +
Preference number: 2 (lower is better)
Translates to: SETGSRSSPGALPQGIYVTGKLP*ALARCR
Trigger: GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGT...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
3UTR-3UTR CCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCATATGTACAACGGAGCTaGGCTGGGGGTGACGCCCCG +
Preference number: 2 (lower is better)
Translates to: RQESASETGSRSSPGALPYVQRS*AGGDAP
Trigger: CGGGGCGTCACCCCCAGCCCAGCTCCGTTGTACATA...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
3UTR TCA 72 bp ACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGGTaGCGCCCCGTGAGGGAGGCAAGAACTGCACAGCAG +
Preference number: 3 (lower is better)
Translates to: TRHLCTTELGWG*RPVREARTAQQ
Trigger: CTGCTGTGCAGTTCTTGCCTCCCTCACGGGGCGTCACCCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCGGAGGCAGGCGCGCTaGGCAGGCGCAAACCTCACT +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPRRQAR*AGANLT
Trigger: AGTGAGGTTTGCGCCTGCGCAGCGCGCCTGCCTCCG...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGGGTTCTCCAAGGGACTaGGCAGCCAGAGCCCCCACC +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPGSPRD*AARAPT
Trigger: GGTGGGGGCTCTGGCTGCGCAGTCCCTTGGAGAACC...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCGAAGCCGGCTGCCCCTaGGGTCATTCCACTCCCAAC +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCREAGCP*GHSTPN
Trigger: GTTGGGAGTGGAATGACCCCAGGGGCAGCCGGCTTC...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCAGGTTGGGCTGTAGCTaGGCGAGCTGGGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRRLGCS*ASWGCS
Trigger: GCTACAGCCCCAGCTCGCCCAGCTACAGCCCAACCT...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCGAAGGCCTCCCCACTaGGCCGAAACTCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPRRPPH*AETPLP
Trigger: TGGCAGAGGAGTTTCGGCTCAGTGGGGAGGCCTTCG...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCATCCACTCTGGCCGTaGATAGCGGGGCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPHPLWP*IAGLHA
Trigger: GGCATGGAGCCCCGCTATGCACGGCCAGAGTGGATG...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCACCAGGAAGCCCACGTaGAACACAGGCTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRTRKPT*NTGLAS
Trigger: ACTGGCCAAGCCTGTGTTTCACGTGGGCTTCCTGGT...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCCGGGCTGTAGCTGGGTaGTGTTGGGGTGTAATTGGG +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRRAVAG*CWGVIG
Trigger: CCCAATTACACCCCAACATCACCCAGCTACAGCCCG...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCGATGTACTTGGCGCCTaGGTACTGGCTGTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRDVLGA*VLAVPP
Trigger: AGGGGGAACAGCCAGTACCCAGGCGCCAAGTACATC...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCGCAGGTGAAGGTCACTaGGCTTGGGGTGGAAACGCA +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRAGEGH*AWGGNA
Trigger: TGCGTTTCCACCCCAAGCCCAGTGACCTTCACCTGC...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCCAGAGACCCCCTTCATaGGGTCACTCTCACCGTGTG +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRQRPPS*GHSHRV
Trigger: CACACGGTGAGAGTGACCCCATGAAGGGGGTCTCTG...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGGCACAGGCAGCACTGTaGCAATCATCCACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPAQAAL*QSSTLA
Trigger: GGCCAGAGTGGATGATTGTCACAGTGCTGCCTGTGC...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGAGGGGAGTAACTTGGTaGGGTCGGGGAATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPRGVTW*GRGIAG
Trigger: CCCAGCTATTCCCCGACCTCACCAAGTTACTCCCCT...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGACCACTTTGATGGGGTaGAGGTCGGAGGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPTTLMG*RSEGRR
Trigger: ACGCCTTCCCTCCGACCTGCACCCCATCAAAGTGGT...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGGAGCCGAAACTCCTCTaGCATGCGGCGGGAACACAA +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPEPKLL*HAAGTQ
Trigger: TTGTGTTCCCGCCGCATGGCAGAGGAGTTTCGGCTC...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCTACACCTTGCTGATCTaGTCGATGCCCTGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRYTLLI*SMPCRV
Trigger: GACCCTGCAGGGCATCGAGCAGATCAGCAAGGTGTA...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCGCAGCTGCACCACCTaGTTGATGGAGTTCCGCACA +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPRSCTT*LMEFRT
Trigger: TGTGCGGAACTCCATCAACCAGGTGGTGCAGCTGCG...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGTCATGTTGGCAGCAATaGAGCGGGGCACGCCAACCT +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPSCWQQ*SGARQP
Trigger: AGGTTGGCGTGCCCCGCTCCATTGCTGCCAACATGA...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCACAGGCCGATTGCTCTaGGGGGTGACAATCATGCGA +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRTGRLL*GVTIMR
Trigger: TCGCATGATTGTCACCCCCCAGAGCAATCGGCCTGT...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCCAATGTCATTGGACGTaGTGCGTACGGGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRQCHWT*CVRGPR
Trigger: ACGTGGACCCCGTACGCACCACGTCCAATGACATTG...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCAGAGACCCCCTTCATaGGGTCACTCTCACCGTGTG +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPQRPPS*GHSHRV
Trigger: CACACGGTGAGAGTGACCCCATGAAGGGGGTCTCTG...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCCGCTCCAACTCGTTCTaGATGTGTGCGTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRRSNSF*MCALLS
Trigger: GCTGAGCAACGCACACATCCAGAACGAGTTGGAGCG...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGCCGGGGAGCCCGGTGTaGGAGACCAGGCAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGPGSPV*ETRQGS
Trigger: ACTCCCCTGCCTGGTCTCCCACACCGGGCTCCCCGG...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGACGTTGGCGAGTAGCTaGGAGACATGGCACCACCTG +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPTLASS*ETWHHL
Trigger: CAGGTGGTGCCATGTCTCCCAGCTACTCGCCAACGT...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCCAAAGGAACACTTCATaGGTGGTCCTGTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRQRNTS*VVLCPG
Trigger: GCCAGGACACAGGACCACTCATGAAGTGTTCCTTTG...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCACACCACTGGGCCAGTaGGTTCTAACAGCACAAGTG +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRTPLGQ*VLTAQV
Trigger: CACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGT...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGCCGCCTCCGCCTAGGTaGTCAGACCTCGTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGPPPPR*SDLVRA
Trigger: CGCCCTGACGAGGTCTGAGCACCTAGGCGGAGGCGG...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCGGTGAATTTGCGCACTaGTGTGAGTGTGTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRGEFAH*CECVLH
Trigger: GTGCAGGACACACTCACAGCAGTGCGCAAATTCACC...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCTCTGGATGTGTGCGTTaGTCAGCACGTCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRSGCVR*SARPSP
Trigger: TGGTGAAGGACGTGCTGAGCAACGCACACATCCAGA...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTCAGGACTCCGAACTaGACTCTCTTGATGGTGCGC +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPLRTPN*TLLMVR
Trigger: GCGCACCATCAAGAGAGTCCAGTTCGGAGTCCTGAG...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCTTGGCCAGTTCAATGTaGCCAAAGTGGCCAGGACAC +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRLASSM*PKWPGH
Trigger: GTGTCCTGGCCACTTTGGCCACATTGAACTGGCCAA...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCGTGGCCACATGGAACTaGAGGAGCTTCACATCCTCT +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRVATWN*RSFTSS
Trigger: AGAGGATGTGAAGCTCCTCCAGTTCCATGTGGCCAC...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGGCATCTCGAGCGGACTaGCCCAACAGGAAGACAGTA +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPASRAD*PNRKTV
Trigger: TACTGTCTTCCTGTTGGGCCAGTCCGCTCGAGATGC...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCAGGGAAGGCGTGGGTTaGTGTGGAAGATTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRREGVG*CGRFSE
Trigger: CTCAGAAAATCTTCCACATCAACCCACGCCTTCCCT...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGTACACAGGATGCCCATaGTCAGCTCCCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPYTGCP*SAPHSP
Trigger: TGGAGAATGGGGAGCTGATCATGGGCATCCTGTGTA...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCAGAAGTCCACTCTTTTaGCCATCAGGTTCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRRSPLF*PSGSLA
Trigger: TGCGAGGGAACCTGATGGGCAAAAGAGTGGACTTCT...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGAGAGACTGTGGCAGGTaGAAGTTCATCTCATCCCCG +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPRDCGR*KFISSP
Trigger: CGGGGATGAGATGAACTTGCACCTGCCACAGTCTCT...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGGTCAAAGCAGCCAGTaGCGGCCGGAGCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGGQSSQ*RPEPAG
Trigger: GCCAGCTGGCTCCGGCCGGCACTGGCTGCTTTGACC...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGTTGCCCTCGACGTTCTaGTGTCCAACGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPLPSTF*CPTTAM
Trigger: CATTGCTGTCGTTGGACAGCAGAACGTCGAGGGCAA...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGATGGGCCCTAGCCCGCTaGCGCACCCCACGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGWALAR*RTPRAL
Trigger: GAGGGCACGTGGGGTGCGGCAGCGGGCTAGGGCCCA...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCCGTGAAACACAGGCTTaGCCAGTTCAATGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRRETQA*PVQCGQ
Trigger: TTGGCCACATTGAACTGGCCAAGCCTGTGTTTCACG...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCCTCATGCACTCGCTCTaGACTCAGCAGGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRLMHSL*TQQDLL
Trigger: AAGAAGATCCTGCTGAGTCCAGAGCGAGTGCATGAG...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGGTGGCCACATGGAACTaGAGGAGCTTCACATCCTCT +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPVATWN*RSFTSS
Trigger: AGAGGATGTGAAGCTCCTCCAGTTCCATGTGGCCAC...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGGGCCACGACAGGTCATaGTATCACACAAGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPGHDRS*YHTREP
Trigger: TGGCTCTCTTGTGTGATACCATGACCTGTCGTGGCC...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCGTATTCAAGGTCATCTaGGTGGCAGGTTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRVFKVI*VAGSPR
Trigger: CCTTGGAGAACCTGCCACCCAGATGACCTTGAATAC...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCAACGGGCAAGCTGCCCTaGGCCCTAGCCCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: RQESASETGSRSSPGALPTGKLP*ALARCR
Trigger: GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGT...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGATTTGCGCACTGCTGTaGGTGTGTCCTGCACAATAC +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPICALL*VCPAQY
Trigger: GTATTGTGCAGGACACACTCACAGCAGTGCGCAAAT...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGAGAATGCGGACCCGATaGCCCATCATGGACATTTTG +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPRMRTR*PIMDIL
Trigger: CAAAATGTCCATGATGGGGCATCGGGTCCGCATTCT...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGCCTCTGCCACCACCGTaGTCTGGGGGTTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGPLPPP*SGGWGH
Trigger: ATGACCCCAACCCCCAGAGCACGGTGGTGGCAGAGG...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGCTGCCGCACCCCACGTaGCCTCAGTTCTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGLPHPT*PQFSSS
Trigger: TGACGAGGAGAACTGAGGGCACGTGGGGTGCGGCAG...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGTTGGCGCCTGGGTACTaGCTGTTCCCCCTGCGCACT +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGLAPGY*LFPLRT
Trigger: AGTGCGCAGGGGGAACAGCCAGTACCCAGGCGCCAA...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGCGGGGCACGCCAACCTaGTCAATGGAGAGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGRGTPT*SMERLG
Trigger: CCCCAACCTCTCCATTGACCAGGTTGGCGTGCCCCG...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGAGTAGGAGGGTGAAGTaGGGGAATAAGAGGGACTCT +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPSRRVK*GNKRDS
Trigger: AGAGTCCCTCTTATTCCCCCACTTCACCCTCCTACT...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGGGTTGGGGTGTAGACTaGAGAGGTTGGGGAATAAGT +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPGWGVD*RGWGIS
Trigger: ACTTATTCCCCAACCTCTCCAGTCTACACCCCAACC...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAGACTGTAGGTGGGGCTaGTGGGCGAGTAACCAGGGG +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQADCRWG*WASNQG
Trigger: CCCCTGGTTACTCGCCCACCAGCCCCACCTACAGTC...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGGCTGCACCACCTGGTTaGTGGAGTTCCGCACAGTCG +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGAAPPG*WSSAQS
Trigger: CGACTGTGCGGAACTCCATCAACCAGGTGGTGCAGC...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGTCACATCCTCTGCAATaGCATGGGCCGCTGCGCCGT +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGSHPLQ*HGPLRR
Trigger: ACGGCGCAGCGGCCCATGTCATTGCAGAGGATGTGA...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGGCTGCTTCAGGGACTTaGGGGGACGCCCAGACTTCT +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGAASGT*GDAQTS
Trigger: AGAAGTCTGGGCGTCCCCTCAAGTCCCTGAAGCAGC...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAGAAGCCGCTGGCATCTaGCGCAGCACTGGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQAEAAGI*RSTGRE
Trigger: TTCTCTCCCAGTGCTGCGTCAGATGCCAGCGGCTTC...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGGCTGGGGGAGGTGGGTaGATAGCTTGGAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGAGGGG*IAWRGR
Trigger: CCTACCTCTCCAAGCTATTCACCCACCTCCCCCAGC...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTCGGAGGCAGGCGCGCTaGGCAGGCGCAAACCTCACT +
Preference number: 4 (lower is better)
Translates to: RSSPGALPQGIYVQRSWARRQAR*AGANLT
Trigger: AGTGAGGTTTGCGCCTGCGCAGCGCGCCTGCCTCCG...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGGCACCCGGCCTTCCTTaGCCTTCAACCGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGAPGLP*PSTAAS
Trigger: TGAAGCAGCGGTTGAAGGGCAAGGAAGGCCGGGTGC...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAGCACCCGGCCTTCCTTaGCCTTCAACCGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQAAPGLP*PSTAAS
Trigger: TGAAGCAGCGGTTGAAGGGCAAGGAAGGCCGGGTGC...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCTTGTGCAGAGTTGGCTaGCGGTTGAAGATAACAATG +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRLCRVG*RLKITM
Trigger: CATTGTTATCTTCAACCGGCAGCCAACTCTGCACAA...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGATCATGGACATTTTGTaGAGAGTTGGCTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPIMDIL*RVGCRL
Trigger: CAACCGGCAGCCAACTCTGCACAAAATGTCCATGAT...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGATCTTTTCAGCAATCTaGTCCATGGTGAGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPIFSAI*SMVSFR
Trigger: CCGGAAGCTCACCATGGAGCAGATTGCTGAAAAGAT...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGGGAGAGAAGCCGGCTaGCCCTGGGGTCATTCCACT +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGGREAG*PWGHST
Trigger: AGTGGAATGACCCCAGGGGCAGCCGGCTTCTCTCCC...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAATGGGCCCTAGCCCGCTaGCGCACCCCACGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQWALAR*RTPRAL
Trigger: GAGGGCACGTGGGGTGCGGCAGCGGGCTAGGGCCCA...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCATCCTCTGCAATGACATaGGCCGCTGCGCCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQASSAMT*AAAPFC
Trigger: GCAGAACGGCGCAGCGGCCCATGTCATTGCAGAGGA...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGTCCTCTGCAATGACATaGGCCGCTGCGCCGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGSSAMT*AAAPFC
Trigger: GCAGAACGGCGCAGCGGCCCATGTCATTGCAGAGGA...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAACCATGGCCAGCTCCTaGATCTCTGCTCGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQATMASS*ISARVS
Trigger: GGAGACGCGAGCAGAGATCCAGGAGCTGGCCATGGT...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCCTTGTTGTCTGTCTGTaGCAAGTGCATGTACACCTT +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRLVVCL*QVHVHL
Trigger: AAGGTGTACATGCACTTGCCACAGACAGACAACAAG...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGCATCTGACGCAGCACTaGGAGAGAAGCCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGHLTQH*ERSRLP
Trigger: GGGCAGCCGGCTTCTCTCCCAGTGCTGCGTCAGATG...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGACGTTGGCGAATAGCTaGGTGATGTGGGACTATAGT +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPTLANS*VMWDYS
Trigger: ACTATAGTCCCACATCACCCAGCTATTCGCCAACGT...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCGTAGACTGGAGAGGTTaGGGAATAAGTAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRVDWRG*GISRRC
Trigger: ACATCTCCTACTTATTCCCCAACCTCTCCAGTCTAC...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGTATGTACAACGGAGCTaGGCTGGGGGTGACGCCCCG +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGYVQRS*AGGDAP
Trigger: CGGGGCGTCACCCCCAGCCCAGCTCCGTTGTACATA...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGCGAACTGGACTCTCTTaGTGGTGCGCAGCGGGCATG +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGRTGLS*WCAAGM
Trigger: CATGCCCGCTGCGCACCATCAAGAGAGTCCAGTTCG...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGCCTGCACAATACCCATaGCAGGCCGATTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGPAQYP*QADCSG
Trigger: CCCAGAGCAATCGGCCTGTCATGGGTATTGTGCAGG...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAAGAACTCAGTGGGTGTaGGGCCGGCTAGGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQARTQWV*GRLGRS
Trigger: ACTCCTACCTAGCCGGCCTCACACCCACTGAGTTCT...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGGGAGTAACCTGGGCTaGAGCCGCTGGCATCTGACG +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGGSNLG*SRWHLT
Trigger: CGTCAGATGCCAGCGGCTTCAGCCCAGGTTACTCCC...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCACGGGCTGTAGCTGGGTaGTGTTGGGGTGTAATTGGG +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQARAVAG*CWGVIG
Trigger: CCCAATTACACCCCAACATCACCCAGCTACAGCCCG...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGCTCAACGCTCTCGCCTaGCAGGCCGTCTTCGCCGTA +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGLNALA*QAVFAV
Trigger: TACGGCGAAGACGGCCTGGCAGGCGAGAGCGTTGAG...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCCCGCCTCCGCCTAGGTaGTCAGACCTCGTCAGGGCG +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFPPPPR*SDLVRA
Trigger: CGCCCTGACGAGGTCTGAGCACCTAGGCGGAGGCGG...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGACGCTCAATCACCCCCTaGCTCGGGTCCATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGRSITP*LGSISP
Trigger: GGGGCTGATGGACCCGAGGCAGGGGGTGATTGAGCG...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCCTCGCATATGTTTTTaGCCTTGCAAAGGTCGTAGA +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPPRICF*PCKGRR
Trigger: TCTACGACCTTTGCAAGGGCAAAAACATATGCGAGG...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAAATGACATGGGCCGCTaGGCCGTTCTGCTCATTGCG +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQANDMGR*AVLLIA
Trigger: CGCAATGAGCAGAACGGCGCAGCGGCCCATGTCATT...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAGAGCCGAAACTCCTCTaGCATGCGGCGGGAACACAA +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQAEPKLL*HAAGTQ
Trigger: TTGTGTTCCCGCCGCATGGCAGAGGAGTTTCGGCTC...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGTGTCATTGGACGTGGTaGGTACGGGGTCCACGTCCT +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGCHWTW*VRGPRP
Trigger: AGGACGTGGACCCCGTACGCACCACGTCCAATGACA...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCGGTCAAAGCAGCCAGTaGCGGCCGGAGCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFGQSSQ*RPEPAG
Trigger: GCCAGCTGGCTCCGGCCGGCACTGGCTGCTTTGACC...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGTCTCCATGCCATACTTaGACTTCTCTGCATCAAGCA +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPSPCHT*TSLHQA
Trigger: TGCTTGATGCAGAGAAGTGCAAGTATGGCATGGAGA...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGTTCACCAGGTCCTCCTaGAGAGTGCGCCGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWFTRSS*RVRRRA
Trigger: GGCCCTGCGGCGCACTCTGCAGGAGGACCTGGTGAA...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGATTCACCAGGTCCTCCTaGAGAGTGCGCCGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGFTRSS*RVRRRA
Trigger: GGCCCTGCGGCGCACTCTGCAGGAGGACCTGGTGAA...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCACGCAGCTGCACCACCTaGTTGATGGAGTTCCGCACA +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQARSCTT*LMEFRT
Trigger: TGTGCGGAACTCCATCAACCAGGTGGTGCAGCTGCG...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGGATGTACTTGGCGCCTaGGTACTGGCTGTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGDVLGA*VLAVPP
Trigger: AGGGGGAACAGCCAGTACCCAGGCGCCAAGTACATC...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAGACAATCATCCACTCTaGCCGTGCATAGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQADNHPL*PCIAGL
Trigger: GAGCCCCGCTATGCACGGCCAGAGTGGATGATTGTC...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGCCGGGGCTTTAGGATaGCCGGCTGTGGGACCTTCC +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWAGALG*PAVGPS
Trigger: GGAAGGTCCCACAGCCGGCCATCCTAAAGCCCCGGC...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGCCGGGGCTTTAGGATaGCCGGCTGTGGGACCTTCC +
Preference number: 4 (lower is better)
Translates to: RSSPGALPQGIYVQRSWAAGALG*PAVGPS
Trigger: GGAAGGTCCCACAGCCGGCCATCCTAAAGCCCCGGC...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACCGGGGAGCCCGGTGTaGGAGACCAGGCAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: SETGSRSSPGALPQGIYVPGSPV*ETRQGS
Trigger: ACTCCCCTGCCTGGTCTCCCACACCGGGCTCCCCGG...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGGACTATAGTTGGGACTaGTTGGAGAATAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: REARTAQQHGQAALGPSPDYSWD*LENRME
Trigger: CTCCATCCTATTCTCCAACCAGTCCCAACTATAGTC...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACTGTAGGTGGGGCTaGTGGGCGAGTAACCAGGGG +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGDCRWG*WASNQG
Trigger: CCCCTGGTTACTCGCCCACCAGCCCCACCTACAGTC...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGTATGTACAACGGAGCTaGGCTGGGGGTGACGCCCCG +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGYVQRS*AGGDAP
Trigger: CGGGGCGTCACCCCCAGCCCAGCTCCGTTGTACATA...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGCACCATTGTCTCGGATaGTGTACTTGGCGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGHHCLG*CTWRLG
Trigger: ACCCAGGCGCCAAGTACATCATCCGAGACAATGGTG...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGCGAACTGGACTCTCTTaGTGGTGCGCAGCGGGCATG +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGRTGLS*WCAAGM
Trigger: CATGCCCGCTGCGCACCATCAAGAGAGTCCAGTTCG...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGACGAAGGCCTCCCCACTaGGCCGAAACTCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGRRPPH*AETPLP
Trigger: TGGCAGAGGAGTTTCGGCTCAGTGGGGAGGCCTTCG...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGGCATGTACACCTTGCTaGTCTGCTCGATGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGACTPC*SARCPA
Trigger: TGCAGGGCATCGAGCAGATCAGCAAGGTGTACATGC...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAGCATGTACACCTTGCTaGTCTGCTCGATGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQAACTPC*SARCPA
Trigger: TGCAGGGCATCGAGCAGATCAGCAAGGTGTACATGC...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCACATGGGACTGGGTGCTaGACCAAAGAACATGCCGGT +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQAHGTGC*TKEHAG
Trigger: ACCGGCATGTTCTTTGGTTCAGCACCCAGTCCCATG...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGCATGGGACTGGGTGCTaGACCAAAGAACATGCCGGT +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGHGTGC*TKEHAG
Trigger: ACCGGCATGTTCTTTGGTTCAGCACCCAGTCCCATG...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGAGGGCTCGTAGGCAGGTaGCGTTGGCGAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGGLVGR*RWRVAG
Trigger: CCCAGCTACTCGCCAACGTCACCTGCCTACGAGCCC...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGCTGGGGGAGGTGGGTaGATAGCTTGGAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGAGGGG*IAWRGR
Trigger: CCTACCTCTCCAAGCTATTCACCCACCTCCCCCAGC...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGTTTTGGGGTGGTGGGTaGATAGGTGGGACTGGTAGG +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGFWGGG*IGGTGR
Trigger: CCTACCAGTCCCACCTATTCACCCACCACCCCAAAA...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGACTCAACGCTCTCGCCTaGCAGGCCGTCTTCGCCGTA +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGLNALA*QAVFAV
Trigger: TACGGCGAAGACGGCCTGGCAGGCGAGAGCGTTGAG...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCATATGTTTTTGCCCTTaGAAAGGTCGTAGACATGTG +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRICFCP*KGRRHV
Trigger: CACATGTCTACGACCTTTGCAAGGGCAAAAACATAT...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGAATGACATGGGCCGCTaGGCCGTTCTGCTCATTGCG +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGNDMGR*AVLLIA
Trigger: CGCAATGAGCAGAACGGCGCAGCGGCCCATGTCATT...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGGAGCTTCACATCCTCTaGAATGACATGGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGELHIL*NDMGRC
Trigger: GCAGCGGCCCATGTCATTGCAGAGGATGTGAAGCTC...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGTGTCATTGGACGTGGTaGGTACGGGGTCCACGTCCT +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGCHWTW*VRGPRP
Trigger: AGGACGTGGACCCCGTACGCACCACGTCCAATGACA...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAGTCACTCTCACCGTGTaGGGCTGCTTCCATAAGCAC +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQAVTLTV*GCFHKH
Trigger: GTGCTTATGGAAGCAGCCGCACACGGTGAGAGTGAC...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGACCTCTGCCACCACCGTaGTCTGGGGGTTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGPLPPP*SGGWGH
Trigger: ATGACCCCAACCCCCAGAGCACGGTGGTGGCAGAGG...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCGGTTCTCCAAGGGACTaGGCAGCCAGAGCCCCCACC +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFGSPRD*AARAPT
Trigger: GGTGGGGGCTCTGGCTGCGCAGTCCCTTGGAGAACC...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGGAGAGAAGCCGGCTaGCCCTGGGGTCATTCCACT +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWGREAG*PWGHST
Trigger: AGTGGAATGACCCCAGGGGCAGCCGGCTTCTCTCCC...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGCCGCAAAGGTCATGTTaGCAGCAATGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGPQRSC*QQWSGA
Trigger: TGCCCCGCTCCATTGCTGCCAACATGACCTTTGCGG...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGAGGACCTCCCCGAGTTaGGAGGAAAAAGCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGRTSPS*EEKAGG
Trigger: TCCTCCGGCTTTTTCCTCCCAACTCGGGGAGGTCCT...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCGATATCCTTGATCTTTaGGTTGTTAGAGTCCACAAG +
Preference number: 4 (lower is better)
Translates to: QELHSSTGKLPWALARCRDILDL*VVRVHK
Trigger: CTTGTGGACTCTAACAACCCAAAGATCAAGGATATC...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACGCCGGATCCTGGGCTaGTACCGCCCACAGCCACCA +
Preference number: 4 (lower is better)
Translates to: SETGSRSSPGALPQGIYVRRILG*YRPQPP
Trigger: TGGTGGCTGTGGGCGGTACCAGCCCAGGATCCGGCG...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACCGCCGGATCCTGGGCTaGTACCGCCCACAGCCACCA +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNRRILG*YRPQPP
Trigger: TGGTGGCTGTGGGCGGTACCAGCCCAGGATCCGGCG...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCCAGAACGCCGGATCCTaGGCTGGTACCGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFQNAGS*AGTAHS
Trigger: GCTGTGGGCGGTACCAGCCCAGGATCCGGCGTTCTG...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGACAGAACGCCGGATCCTaGGCTGGTACCGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGQNAGS*AGTAHS
Trigger: GCTGTGGGCGGTACCAGCCCAGGATCCGGCGTTCTG...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGCGGGGCACGCCAACCTaGTCAATGGAGAGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWRGTPT*SMERLG
Trigger: CCCCAACCTCTCCATTGACCAGGTTGGCGTGCCCCG...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGTCATGCGAGGAACCATaGCCAGCTCCTGGATCTCTG +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGSCEEP*PAPGSL
Trigger: CAGAGATCCAGGAGCTGGCCATGGTTCCTCGCATGA...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTCATCTGACGCAGCACTaGGAGAGAAGCCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RSSPGALPQGIYVQRSWAHLTQH*ERSRLP
Trigger: GGGCAGCCGGCTTCTCTCCCAGTGCTGCGTCAGATG...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGCACCATTGTCTCGGATaGTGTACTTGGCGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGHHCLG*CTWRLG
Trigger: ACCCAGGCGCCAAGTACATCATCCGAGACAATGGTG...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGCACAGGCAGCACTGTaGCAATCATCCACTCTGGCC +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGAQAAL*QSSTLA
Trigger: GGCCAGAGTGGATGATTGTCACAGTGCTGCCTGTGC...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGACTCCCTCCACCACTTTaGTGGGGTGCAGGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGLPPPL*WGAGRR
Trigger: CCTCCGACCTGCACCCCATCAAAGTGGTGGAGGGAG...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCCTCCCTCCACCACTTTaGTGGGGTGCAGGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFLPPPL*WGAGRR
Trigger: CCTCCGACCTGCACCCCATCAAAGTGGTGGAGGGAG...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGACCAGGGAGCCAGCTaGCGTGCCCAGAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWDQGAS*RAQRLL
Trigger: AAGAAGTCTCTGGGCACGTCAGCTGGCTCCCTGGTC...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGACCAGGGAGCCAGCTaGCGTGCCCAGAGACTTCTT +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGDQGAS*RAQRLL
Trigger: AAGAAGTCTCTGGGCACGTCAGCTGGCTCCCTGGTC...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCATCATCCTTGATGAAGTaGGGCAGAGTCCGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQASSLMK*GRVRCL
Trigger: CAAGCACCGGACTCTGCCTCACTTCATCAAGGATGA...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGAAGCCGCTGGCATCTaGCGCAGCACTGGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: RSSPGALPQGIYVQRSWAEAAGI*RSTGRE
Trigger: TTCTCTCCCAGTGCTGCGTCAGATGCCAGCGGCTTC...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGGCTCGTAGGCAGGTaGCGTTGGCGAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNGLVGR*RWRVAG
Trigger: CCCAGCTACTCGCCAACGTCACCTGCCTACGAGCCC...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGACACCACTGGGCCAGTaGGTTCTAACAGCACAAGTG +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGTPLGQ*VLTAQV
Trigger: CACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGT...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACGCTCAATCACCCCCTaGCTCGGGTCCATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SETGSRSSPGALPQGIYVRSITP*LGSISP
Trigger: GGGGCTGATGGACCCGAGGCAGGGGGTGATTGAGCG...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGCATAGCGGGGCTCCATaGCCAGCACAAAACACTCCT +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGHSGAP*PAQNTP
Trigger: AGGAGTGTTTTGTGCTGGGCATGGAGCCCCGCTATG...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCCATCCACTCTGGCCGTaGATAGCGGGGCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFHPLWP*IAGLHA
Trigger: GGCATGGAGCCCCGCTATGCACGGCCAGAGTGGATG...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAGGTGAATTTGCGCACTaGTGTGAGTGTGTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQAGEFAH*CECVLH
Trigger: GTGCAGGACACACTCACAGCAGTGCGCAAATTCACC...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGAAACTCCTCTGCCATaGGGCGGGAACACAACGTGG +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGETPLP*GGNTTW
Trigger: CCACGTTGTGTTCCCGCCGCATGGCAGAGGAGTTTC...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGTTCCGGTCAGTCATGTaGTTCCGATCCAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGFRSVM*FRSSST
Trigger: GGTGGAGCTGGATCGGAAGCACATGACTGACCGGAA...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGGGAGAAGATTTGCTTaGCTGTCCACAGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGGRRFA*LSTGAG
Trigger: CCCGGCCCCTGTGGACAGGCAAGCAAATCTTCTCCC...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGTCTGGATGTGTGCGTTaGTCAGCACGTCCTTCACCA +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGSGCVR*SARPSP
Trigger: TGGTGAAGGACGTGCTGAGCAACGCACACATCCAGA...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCACTCGTTCTGGATGTGTaGGTTGCTCAGCACGTCCTT +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQALVLDV*VAQHVL
Trigger: AAGGACGTGCTGAGCAACGCACACATCCAGAACGAG...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGTTGCCCTCGACGTTCTaGTGTCCAACGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGLPSTF*CPTTAM
Trigger: CATTGCTGTCGTTGGACAGCAGAACGTCGAGGGCAA...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGCTCAGGACTCCGAACTaGACTCTCTTGATGGTGCGC +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGLRTPN*TLLMVR
Trigger: GCGCACCATCAAGAGAGTCCAGTTCGGAGTCCTGAG...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAATCATCCACTCTaGCCGTGCATAGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGDNHPL*PCIAGL
Trigger: GAGCCCCGCTATGCACGGCCAGAGTGGATGATTGTC...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGACCATGGTGGCCACATaGAACTGGAGGAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGTMVAT*NWRSFT
Trigger: TGTGAAGCTCCTCCAGTTCCATGTGGCCACCATGGT...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGACAGGCCGATTGCTCTaGGGGGTGACAATCATGCGA +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGTGRLL*GVTIMR
Trigger: TCGCATGATTGTCACCCCCCAGAGCAATCGGCCTGT...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGAGCGTGGCATTTTCCTaGGCCTGTCGACTTAGTGGG +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGSVAFS*ACRLSG
Trigger: CCCACTAAGTCGACAGGCCCAGGAAAATGCCACGCT...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGAACGTGGACCGCAGGTaGATGTTGAAGAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGNVDRR*MLKSSV
Trigger: CACGCTGCTCTTCAACATCCACCTGCGGTCCACGTT...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGTCTCCACAATGTCATTaGACGTGGTGCGTACGGGGT +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGSPQCH*TWCVRG
Trigger: ACCCCGTACGCACCACGTCCAATGACATTGTGGAGA...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGAGTGGTCCTGTGTCCTaGCGGTTGACTCCGTGTCGG +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWSGPVS*RLTPCR
Trigger: CCGACACGGAGTCAACCGCCAGGACACAGGACCACT...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGGGAACACTTCATGAGTaGTCCTGTGTCCTGGCGGTT +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGGTLHE*SCVLAV
Trigger: AACCGCCAGGACACAGGACCACTCATGAAGTGTTCC...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGACCGGCCGGAGCCAGCTaGCCCAGCATGATATTCTCA +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGPAGAS*PSMIFS
Trigger: TGAGAATATCATGCTGGGCCAGCTGGCTCCGGCCGG...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGAGTGTTCCCTGGGGTaGGCTCCAGCTCATTGTTGT +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGECSLG*APAHCC
Trigger: ACAACAATGAGCTGGAGCCCACCCCAGGGAACACTC...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTCCGCAGAGTGTTCCCTaGGGTGGGCTCCAGCTCATT +
Preference number: 4 (lower is better)
Translates to: RSSPGALPQGIYVQRSWAPQSVP*GGLQLI
Trigger: AATGAGCTGGAGCCCACCCCAGGGAACACTCTGCGG...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACCGCAGAGTGTTCCCTaGGGTGGGCTCCAGCTCATT +
Preference number: 4 (lower is better)
Translates to: RQESASETGSRSSPGALPPQSVP*GGLQLI
Trigger: AATGAGCTGGAGCCCACCCCAGGGAACACTCTGCGG...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAGTGCTTGAAGCCAAATaGAATCCGCTTGCCCTCGAC +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQAVLEAK*NPLALD
Trigger: GTCGAGGGCAAGCGGATTCCATTTGGCTTCAAGCAC...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGCAGGGGTTGCACCCTaGTTCCAAGGTGTCATGGCA +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGAGVAP*FQGVMA
Trigger: TGCCATGACACCTTGGAACCAGGGTGCAACCCCTGC...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGTTCCACTCCCAACACTaGGGGACCAGGCGCCATAGG +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWFHSQH*GTRRHR
Trigger: CCTATGGCGCCTGGTCCCCCAGTGTTGGGAGTGGAA...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCGGCAGGGGAGTAACCTaGGCTGAAGCCGCTGGCATC +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFGRGVT*AEAAGI
Trigger: GATGCCAGCGGCTTCAGCCCAGGTTACTCCCCTGCC...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGGGTTGGGGTATACTCTaGGGAGCTGGGACTGTAAGA +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGGWGIL*GAGTVR
Trigger: TCTTACAGTCCCAGCTCCCCAGAGTATACCCCAACC...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGCCGCAGCTGATTGTTaGTCTTCACGATGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGAAADC*SSRCQP
Trigger: TGGCTGACATCGTGAAGATCAACAATCAGCTGCGGC...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACGCTGCTTCAGGGACTTaGGGGGACGCCCAGACTTCT +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYAASGT*GDAQTS
Trigger: AGAAGTCTGGGCGTCCCCTCAAGTCCCTGAAGCAGC...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCACAATGCCCAGCACCGTaGAGATCTCCACAATGTCAT +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQAQCPAP*RSPQCH
Trigger: ATGACATTGTGGAGATCTTCACGGTGCTGGGCATTG...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCATCTCATCGCTGTTCATaGTGCGAATACGGAGCACCA +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQASHRCS*CEYGAP
Trigger: TGGTGCTCCGTATTCGCATCATGAACAGCGATGAGA...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGAGAATGCGGTTCACCTaGTTCTCAAACGTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGRMRFT*FSNVCR
Trigger: GCGGCAGACGTTTGAGAATCAGGTGAACCGCATTCT...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGTGGCGAATAGCTGGGTaGTGTGGGACTATAGTTGGG +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGWRIAG*CGTIVG
Trigger: CCCAACTATAGTCCCACATCACCCAGCTATTCGCCA...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCGGGGCTGTAGCTGGGTaGGCTTGGGGTATAGGTTGG +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFGAVAG*AWGIGW
Trigger: CCAACCTATACCCCAAGCTCACCCAGCTACAGCCCC...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGCATAGCGGGGCTCCATaGCCAGCACAAAACACTCCT +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGHSGAP*PAQNTP
Trigger: AGGAGTGTTTTGTGCTGGGCATGGAGCCCCGCTATG...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCTTACGGGCAGAGCCCTaGATCACAACAGCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFLRAEP*ITTAGR
Trigger: GCGGCCTGCTGTTGTGATGCAGGGCTCTGCCCGTAA...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGAGCTTCACATCCTCTaGAATGACATGGGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGELHIL*NDMGRC
Trigger: GCAGCGGCCCATGTCATTGCAGAGGATGTGAAGCTC...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAGCTCCTGGATCTCTaGTCGCGTCTCCAGAGACTG +
Preference number: 4 (lower is better)
Translates to: RQESASETGSRSSPGALPQLLDL*SRLQRL
Trigger: CAGTCTCTGGAGACGCGAGCAGAGATCCAGGAGCTG...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTCAGCTCCTGGATCTCTaGTCGCGTCTCCAGAGACTG +
Preference number: 4 (lower is better)
Translates to: RSSPGALPQGIYVQRSWAQLLDL*SRLQRL
Trigger: CAGTCTCTGGAGACGCGAGCAGAGATCCAGGAGCTG...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGACTCACCGTGTGCGGCTaGTTCCATAAGCACGTCCAC +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGLTVCG*FHKHVH
Trigger: GTGGACGTGCTTATGGAAGCAGCCGCACACGGTGAG...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGTGGTGGGGATCTCCATaGCATACTTGCACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGWWGSP*HTCTSL
Trigger: CAGAGAAGTGCAAGTATGGCATGGAGATCCCCACCA...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACCCATTCCTGATCCTCTaGCACCACCGTGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYPFLIL*HHRALG
Trigger: CCCCAGAGCACGGTGGTGGCAGAGGATCAGGAATGG...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGATGAGGGAGAAGATTTaGTTGCCTGTCCACAGGGGC +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGMREKI*LPVHRG
Trigger: GCCCCTGTGGACAGGCAAGCAAATCTTCTCCCTCAT...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGATCTGCTCGATGCCCTaGAGGGTCATATCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGICSMP*RVISVS
Trigger: GCTGACAGATATGACCCTGCAGGGCATCGAGCAGAT...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACCTGCCGCACCCCACGTaGCCTCAGTTCTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNLPHPT*PQFSSS
Trigger: TGACGAGGAGAACTGAGGGCACGTGGGGTGCGGCAG...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCATCATGTTGGCAGCAATaGAGCGGGGCACGCCAACCT +
Preference number: 4 (lower is better)
Translates to: RQESASETGSRSSPGALPSCWQQ*SGARQP
Trigger: AGGTTGGCGTGCCCCGCTCCATTGCTGCCAACATGA...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAATTGGCGCCTGGGTACTaGCTGTTCCCCCTGCGCACT +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQLAPGY*LFPLRT
Trigger: AGTGCGCAGGGGGAACAGCCAGTACCCAGGCGCCAA...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGCAGGTGAAGGTCACTaGGCTTGGGGTGGAAACGCA +
Preference number: 4 (lower is better)
Translates to: RSSPGALPQGIYVQRSWAAGEGH*AWGGNA
Trigger: TGCGTTTCCACCCCAAGCCCAGTGACCTTCACCTGC...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAACGCCAACCTGGTCAATaGAGAGGTTGGGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQRQPGQ*RGWGRG
Trigger: CCCCCGACCCCAACCTCTCCATTGACCAGGTTGGCG...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACCGCCAACCTGGTCAATaGAGAGGTTGGGGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNRQPGQ*RGWGRG
Trigger: CCCCCGACCCCAACCTCTCCATTGACCAGGTTGGCG...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGCGTCTCCAGAGACTGTaGCAGGTGCAAGTTCATCTC +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGRLQRL*QVQVHL
Trigger: GAGATGAACTTGCACCTGCCACAGTCTCTGGAGACG...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAGTCGGAGGGAAGGCGTaGGTTGATGTGGAAGATTTT +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQAVGGKA*VDVEDF
Trigger: AAAATCTTCCACATCAACCCACGCCTTCCCTCCGAC...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACCCGGCCGGAGCCAGCTaGCCCAGCATGATATTCTCA +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYPAGAS*PSMIFS
Trigger: TGAGAATATCATGCTGGGCCAGCTGGCTCCGGCCGG...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGCCAGGCCGGGGATATTaGTGGGGATCTCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWPGRGY*WGSPCH
Trigger: ATGGCATGGAGATCCCCACCAATATCCCCGGCCTGG...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACCGTGCTCTGGGGGTTaGGGTCATAGTAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: RQESASETGSRSSPGALPPCSGG*GHSRWL
Trigger: CAGCCATCTACTATGACCCCAACCCCCAGAGCACGG...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGCTTGCTGTCTCCAGTTaGGAAGATGACCCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGLAVSS*EDDPEH
Trigger: GTGCTCAGGGTCATCTTCCCAACTGGAGACAGCAAG...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCATCGGGATGGGTGCTGTaGGTACGGATACAATTGATG +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQASGWVL*VRIQLM
Trigger: CATCAATTGTATCCGTACCCACAGCACCCATCCCGA...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAGTATTCAAGGTCATCTaGGTGGCAGGTTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQAVFKVI*VAGSPR
Trigger: CCTTGGAGAACCTGCCACCCAGATGACCTTGAATAC...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGCATCTCGAGCGGACTaGCCCAACAGGAAGACAGTA +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGASRAD*PNRKTV
Trigger: TACTGTCTTCCTGTTGGGCCAGTCCGCTCGAGATGC...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCATATCTGTCAGCATGTTaGACTCGATGCAGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQAYLSAC*TRCSAG
Trigger: TCCTGCGCTGCATCGAGTCCAACATGCTGACAGATA...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCATTCCACCCATGGGACTaGGTGCTGAACCAAAGAACA +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQAFHPWD*VLNQRT
Trigger: TGTTCTTTGGTTCAGCACCCAGTCCCATGGGTGGAA...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATTCCACTCCCAACACTaGGGGACCAGGCGCCATAGG +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGFHSQH*GTRRHR
Trigger: CCTATGGCGCCTGGTCCCCCAGTGTTGGGAGTGGAA...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGCAGGGGAGTAACCTaGGCTGAAGCCGCTGGCATC +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNGRGVT*AEAAGI
Trigger: GATGCCAGCGGCTTCAGCCCAGGTTACTCCCCTGCC...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGACGTTGGCGAGTAGCTaGGAGACATGGCACCACCTG +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWTLASS*ETWHHL
Trigger: CAGGTGGTGCCATGTCTCCCAGCTACTCGCCAACGT...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGTAGCTTGGAGAGGTTaGGCTGTAGTTAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGVAWRG*AVVRAG
Trigger: ACCAGCCCTAACTACAGCCCAACCTCTCCAAGCTAC...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGGCTTGGGGTATAGGTTaGAGACTGTGGTGTGTATCG +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGAWGIG*RLWCVS
Trigger: CGATACACACCACAGTCTCCAACCTATACCCCAAGC...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTAAGGTTGGGCTGTAGCTaGGCGAGCTGGGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: SETGSRSSPGALPQGIYVRLGCS*ASWGCS
Trigger: GCTACAGCCCCAGCTCGCCCAGCTACAGCCCAACCT...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTAGTAGGTTGAGCCTTTaGGGGAGGTGGGCGAGTAGG +
Preference number: 4 (lower is better)
Translates to: RSSPGALPQGIYVQRSWASRLSL*GRWASR
Trigger: CCTACTCGCCCACCTCCCCCAAAGGCTCAACCTACT...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACCTGACTCCATGGACTTaGTCAGCCGCCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYLTPWT*SAAAGC
Trigger: ACATCCAGCGGCGGCTGATCAAGTCCATGGAGTCAG...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCATCGTCTCTGGGTATTTaGTGCCACCCTCCGTCACAG +
Preference number: 4 (lower is better)
Translates to: RQESASETGSRSSPGALPSSLGI*CHPPSQ
Trigger: CTGTGACGGAGGGTGGCATCAAATACCCAGAGACGA...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACGGTCGTAGACATGTGTaGGCCGCTTCTTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYGRRHV*AASWAV
Trigger: GACAGCCCAAGAAGCGGCTCACACATGTCTACGACC...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAAGGATCTTCTTCTCCTaGGAGTCCTCATTAACGTGC +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQARIFFS*ESSLTC
Trigger: GCACGTTAATGAGGACTCTCAGGAGAAGAAGATCCT...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACTCACATCCTCTGCAATaGCATGGGCCGCTGCGCCGT +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNSHPLQ*HGPLRR
Trigger: ACGGCGCAGCGGCCCATGTCATTGCAGAGGATGTGA...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGACCTGCACAATACCCATaGCAGGCCGATTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGPAQYP*QADCSG
Trigger: CCCAGAGCAATCGGCCTGTCATGGGTATTGTGCAGG...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGCAGAGTCCGGTGCTTaGAGCCAAATGGAATCCGCT +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWAESGA*SQMESA
Trigger: AGCGGATTCCATTTGGCTTCAAGCACCGGACTCTGC...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGCGCAATGGCTTGGTTaGACTTGGACTCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGAQWLG*TWTQSP
Trigger: GGGAGATTGAGTCCAAGTTCAACCAAGCCATTGCGC...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAAGGGGCTGTAGCTGGGTaGGCTTGGGGTATAGGTTGG +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQGAVAG*AWGIGW
Trigger: CCAACCTATACCCCAAGCTCACCCAGCTACAGCCCC...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACTTACGGGCAGAGCCCTaGATCACAACAGCAGGCCGC +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNLRAEP*ITTAGR
Trigger: GCGGCCTGCTGTTGTGATGCAGGGCTCTGCCCGTAA...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGATTGCCCTTCAACCGCTaGTTCAGGGACTTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGLPFNR*FRDLRG
Trigger: TCCCCTCAAGTCCCTGAAGCAGCGGTTGAAGGGCAA...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAATCCCCGTCAAAGTCTaGATTGTACGGAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQAIPVKV*IVRSCH
Trigger: GTGACAACTCCGTACAATGCAGACTTTGACGGGGAT...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGAACCACTTTGATGGGGTaGAGGTCGGAGGGAAGGCGT +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGTTLMG*RSEGRR
Trigger: ACGCCTTCCCTCCGACCTGCACCCCATCAAAGTGGT...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACGAAACTCCTCTGCCATaGGGCGGGAACACAACGTGG +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYETPLP*GGNTTW
Trigger: CCACGTTGTGTTCCCGCCGCATGGCAGAGGAGTTTC...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACCTCACCGTGTGCGGCTaGTTCCATAAGCACGTCCAC +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYLTVCG*FHKHVH
Trigger: GTGGACGTGCTTATGGAAGCAGCCGCACACGGTGAG...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAACCATTCCTGATCCTCTaGCACCACCGTGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQPFLIL*HHRALG
Trigger: CCCCAGAGCACGGTGGTGGCAGAGGATCAGGAATGG...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGATTCCGGTCAGTCATGTaGTTCCGATCCAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGFRSVM*FRSSST
Trigger: GGTGGAGCTGGATCGGAAGCACATGACTGACCGGAA...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTAGGGAGAAGATTTGCTTaGCTGTCCACAGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: SETGSRSSPGALPQGIYVGRRFA*LSTGAG
Trigger: CCCGGCCCCTGTGGACAGGCAAGCAAATCTTCTCCC...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCCTGAACCAAAGAACATaGCGGTGGGTCCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFLNQRT*RWVQQP
Trigger: GGGCTGCTGGACCCACCGGCATGTTCTTTGGTTCAG...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGAGCCATAGGCAGGGGTTaGACCCTGGTTCCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGAIGRG*TLVPRC
Trigger: ACACCTTGGAACCAGGGTGCAACCCCTGCCTATGGC...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAGGACCTCCCCGAGTTaGGAGGAAAAAGCCGGAGGA +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYRTSPS*EEKAGG
Trigger: TCCTCCGGCTTTTTCCTCCCAACTCGGGGAGGTCCT...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGTCAATGTGGCCAAAGTaGCCAGGACACTCTGTCATG +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGSMWPK*PGHSVM
Trigger: CATGACAGAGTGTCCTGGCCACTTTGGCCACATTGA...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACGCCCACAGCCACCATaGCCCTTTTCTTTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: RQESASETGSRSSPGALPRPQPP*PFSLVR
Trigger: TCTGACCAAAGAAAAGGGCCATGGTGGCTGTGGGCG...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGCGAAAGGTAGACCATaGGAGAATGCGGACCCGATG +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWAKGRP*ENADPM
Trigger: CATCGGGTCCGCATTCTCCCATGGTCTACCTTTCGC...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTAACCATGGCCAGCTCCTaGATCTCTGCTCGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: SETGSRSSPGALPQGIYVTMASS*ISARVS
Trigger: GGAGACGCGAGCAGAGATCCAGGAGCTGGCCATGGT...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAAACGTGGACCGCAGGTaGATGTTGAAGAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGNVDRR*MLKSSV
Trigger: CACGCTGCTCTTCAACATCCACCTGCGGTCCACGTT...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGTCTCCACAATGTCATTaGACGTGGTGCGTACGGGGT +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGSPQCH*TWCVRG
Trigger: ACCCCGTACGCACCACGTCCAATGACATTGTGGAGA...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTAAGTGGTCCTGTGTCCTaGCGGTTGACTCCGTGTCGG +
Preference number: 4 (lower is better)
Translates to: SETGSRSSPGALPQGIYVSGPVS*RLTPCR
Trigger: CCGACACGGAGTCAACCGCCAGGACACAGGACCACT...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCCCAGGCCGGGGATATTaGTGGGGATCTCCATGCCAT +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFPGRGY*WGSPCH
Trigger: ATGGCATGGAGATCCCCACCAATATCCCCGGCCTGG...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACGCTCCAACTCGTTCTaGATGTGTGCGTTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RQESASETGSRSSPGALPRSNSF*MCALLS
Trigger: GCTGAGCAACGCACACATCCAGAACGAGTTGGAGCG...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGAGTGTTCCCTGGGGTaGGCTCCAGCTCATTGTTGT +
Preference number: 4 (lower is better)
Translates to: RSSPGALPQGIYVQRSWAECSLG*APAHCC
Trigger: ACAACAATGAGCTGGAGCCCACCCCAGGGAACACTC...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGGCACAGAATATCCTTaGCTCTCTCAGCATCTCGAG +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGGTEYP*LSQHLE
Trigger: CTCGAGATGCTGAGAGAGCCAAGGATATTCTGTGCC...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGGTTCCAAGGTGTCATaGCAGGAGAGATTCCACCCA +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGGSKVS*QERFHP
Trigger: TGGGTGGAATCTCTCCTGCCATGACACCTTGGAACC...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCGCAGGGGTTGCACCCTaGTTCCAAGGTGTCATGGCA +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFAGVAP*FQGVMA
Trigger: TGCCATGACACCTTGGAACCAGGGTGCAACCCCTGC...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGTAGCTTGGAGAGGTTaGGCTGTAGTTAGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGVAWRG*AVVRAG
Trigger: ACCAGCCCTAACTACAGCCCAACCTCTCCAAGCTAC...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGCTGTGGTGTGTATCGTaGGCTGGAAGGGGAGTAACT +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGLWCVS*AGRGVT
Trigger: AGTTACTCCCCTTCCAGCCCACGATACACACCACAG...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAGTAGGTTGAGCCTTTaGGGGAGGTGGGCGAGTAGG +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFSRLSL*GRWASR
Trigger: CCTACTCGCCCACCTCCCCCAAAGGCTCAACCTACT...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGAAGGATCTTCAATTTaGGGACAGGCAGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWEGSSI*GQAGGG
Trigger: CCCACCCCCTGCCTGTCCCCAAATTGAAGATCCTTC...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACTGACTCCATGGACTTaGTCAGCCGCCGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: SETGSRSSPGALPQGIYVLTPWT*SAAAGC
Trigger: ACATCCAGCGGCGGCTGATCAAGTCCATGGAGTCAG...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCTCGTCTCTGGGTATTTaGTGCCACCCTCCGTCACAG +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFSSLGI*CHPPSQ
Trigger: CTGTGACGGAGGGTGGCATCAAATACCCAGAGACGA...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAAGGTCGTAGACATGTGTaGGCCGCTTCTTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQGRRHV*AASWAV
Trigger: GACAGCCCAAGAAGCGGCTCACACATGTCTACGACC...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGTCATTGCGCCGCAGCTaGTTGTTGATCTTCACGATG +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGSLRRS*LLIFTM
Trigger: CATCGTGAAGATCAACAATCAGCTGCGGCGCAATGA...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAATGTGGAAGATTTTCTaGGCATTCCAGATCATCCGC +
Preference number: 4 (lower is better)
Translates to: PAPHQATGKEGSSIWGQAMWKIF*AFQIIR
Trigger: GCGGATGATCTGGAATGCTCAGAAAATCTTCCACAT...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAACCGCAGGTGGATGTTaGAGAGCAGCGTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGTAGGC*RAAWHF
Trigger: AAAATGCCACGCTGCTCTTCAACATCCACCTGCGGT...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGACCGCAGGTGGATGTTaGAGAGCAGCGTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWTAGGC*RAAWHF
Trigger: AAAATGCCACGCTGCTCTTCAACATCCACCTGCGGT...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTCAATCTGCTCCATGGTaGGCTTCCGGTCAGTCATGT +
Preference number: 4 (lower is better)
Translates to: RSSPGALPQGIYVQRSWAQSAPW*ASGQSC
Trigger: ACATGACTGACCGGAAGCTCACCATGGAGCAGATTG...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGCAATCTGCTCCATGGTaGGCTTCCGGTCAGTCATGT +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWQSAPW*ASGQSC
Trigger: ACATGACTGACCGGAAGCTCACCATGGAGCAGATTG...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTTACACAGGATGCCCATaGTCAGCTCCCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: RSSPGALPQGIYVQRSWAYTGCP*SAPHSP
Trigger: TGGAGAATGGGGAGCTGATCATGGGCATCCTGTGTA...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCATCATCCTTGATGAAGTaGGGCAGAGTCCGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: RQESASETGSRSSPGALPSSLMK*GRVRCL
Trigger: CAAGCACCGGACTCTGCCTCACTTCATCAAGGATGA...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAAAGAACTCAGTGGGTGTaGGGCCGGCTAGGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQRTQWV*GRLGRS
Trigger: ACTCCTACCTAGCCGGCCTCACACCCACTGAGTTCT...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAAAGGGGAGTAACTTGGTaGGGTCGGGGAATAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQRGVTW*GRGIAG
Trigger: CCCAGCTATTCCCCGACCTCACCAAGTTACTCCCCT...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACTTTTGGGGTGGTGGGTaGATAGGTGGGACTGGTAGG +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYFWGGG*IGGTGR
Trigger: CCTACCAGTCCCACCTATTCACCCACCACCCCAAAA...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGACTGGCTGTTCCCCCTaGGCACTAGTTCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWTGCSP*ALVLEV
Trigger: GACTTCAAGAACTAGTGCGCAGGGGGAACAGCCAGT...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGGAAACGCAAGTCAATaGGATCACCATTGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGGNASQ*DHHCLG
Trigger: TCCGAGACAATGGTGATCGCATTGACTTGCGTTTCC...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGCCTCGCATATGTTTTTaGCCTTGCAAAGGTCGTAGA +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGPRICF*PCKGRR
Trigger: TCTACGACCTTTGCAAGGGCAAAAACATATGCGAGG...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGCTGTGAGTGTGTCCTaGACAATACCCATGACAGGC +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWAVSVS*TIPMTG
Trigger: GCCTGTCATGGGTATTGTGCAGGACACACTCACAGC...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACGTCACTCTCACCGTGTaGGGCTGCTTCCATAAGCAC +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYVTLTV*GCFHKH
Trigger: GTGCTTATGGAAGCAGCCGCACACGGTGAGAGTGAC...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCAATGAGGGAGAAGATTTaGTTGCCTGTCCACAGGGGC +
Preference number: 4 (lower is better)
Translates to: RQESASETGSRSSPGALPMREKI*LPVHRG
Trigger: GCCCCTGTGGACAGGCAAGCAAATCTTCTCCCTCAT...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGACTCGTTCTGGATGTGTaGGTTGCTCAGCACGTCCTT +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGLVLDV*VAQHVL
Trigger: AAGGACGTGCTGAGCAACGCACACATCCAGAACGAG...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGCAAATGGAATCCGCTTaGCCTCGACGTTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWQMESA*PRRSAV
Trigger: GACAGCAGAACGTCGAGGGCAAGCGGATTCCATTTG...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATACACCTTGCTGATCTaGTCGATGCCCTGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGYTLLI*SMPCRV
Trigger: GACCCTGCAGGGCATCGAGCAGATCAGCAAGGTGTA...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAAGCCATAGGCAGGGGTTaGACCCTGGTTCCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQAIGRG*TLVPRC
Trigger: ACACCTTGGAACCAGGGTGCAACCCCTGCCTATGGC...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGATTGATCAGCCGCCGCTaGATGTATCCAGTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGLISRR*MYPVSA
Trigger: TGCTGAGACTGGATACATCCAGCGGCGGCTGATCAA...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAGCGTAGCCAGGTTCTaGAACTCAACGCTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFSVARF*NSTLSP
Trigger: AGGCGAGAGCGTTGAGTTCCAGAACCTGGCTACGCT...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACCCGCAAAGGTCATGTTaGCAGCAATGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNPQRSC*QQWSGA
Trigger: TGCCCCGCTCCATTGCTGCCAACATGACCTTTGCGG...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCATCACTGGGCTTGGGGTaGAAACGCAAGTCAATGCGA +
Preference number: 4 (lower is better)
Translates to: RQESASETGSRSSPGALPSLGLG*KRKSMR
Trigger: TCGCATTGACTTGCGTTTCCACCCCAAGCCCAGTGA...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGATCCCTCAGTCGTCTCTaGGTATTTGATGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGSLSRL*VFDATL
Trigger: GAGGGTGGCATCAAATACCCAGAGACGACTGAGGGA...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACTTTCCTGCACATGTTTaGCAGCGGCCAGTCCGCTCA +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYFPAHV*QRPVRS
Trigger: TGAGCGGACTGGCCGCTGCCAAACATGTGCAGGAAA...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGACGCCCACAGCCACCATaGCCCTTTTCTTTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGRPQPP*PFSLVR
Trigger: TCTGACCAAAGAAAAGGGCCATGGTGGCTGTGGGCG...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGACATTGTCCACCATGGTaGCCACATGGAACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGHCPPW*PHGTGG
Trigger: TCCTCCAGTTCCATGTGGCCACCATGGTGGACAATG...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACATTGTCCACCATGGTaGCCACATGGAACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RQESASETGSRSSPGALPHCPPW*PHGTGG
Trigger: TCCTCCAGTTCCATGTGGCCACCATGGTGGACAATG...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGCTCATTGTCCACCATaGTGGCCACATGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWAHCPP*WPHGTG
Trigger: TCCAGTTCCATGTGGCCACCATGGTGGACAATGAGC...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCGCGAAAGGTAGACCATaGGAGAATGCGGACCCGATG +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFAKGRP*ENADPM
Trigger: CATCGGGTCCGCATTCTCCCATGGTCTACCTTTCGC...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACGTCTCCAGAGACTGTaGCAGGTGCAAGTTCATCTC +
Preference number: 4 (lower is better)
Translates to: RQESASETGSRSSPGALPRLQRL*QVQVHL
Trigger: GAGATGAACTTGCACCTGCCACAGTCTCTGGAGACG...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCATGCGAGGAACCATaGCCAGCTCCTGGATCTCTG +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGSCEEP*PAPGSL
Trigger: CAGAGATCCAGGAGCTGGCCATGGTTCCTCGCATGA...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGAAGCGTGGCATTTTCCTaGGCCTGTCGACTTAGTGGG +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGSVAFS*ACRLSG
Trigger: CCCACTAAGTCGACAGGCCCAGGAAAATGCCACGCT...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGACAATGTCATTGGACGTaGTGCGTACGGGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGQCHWT*CVRGPR
Trigger: ACGTGGACCCCGTACGCACCACGTCCAATGACATTG...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCAGGCCACGACAGGTCATaGTATCACACAAGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: RQESASETGSRSSPGALPGHDRS*YHTREP
Trigger: TGGCTCTCTTGTGTGATACCATGACCTGTCGTGGCC...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGAACACTTCATGAGTaGTCCTGTGTCCTGGCGGTT +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWGTLHE*SCVLAV
Trigger: AACCGCCAGGACACAGGACCACTCATGAAGTGTTCC...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACCGTGCTCTGGGGGTTaGGGTCATAGTAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: SETGSRSSPGALPQGIYVPCSGG*GHSRWL
Trigger: CAGCCATCTACTATGACCCCAACCCCCAGAGCACGG...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGTGCTTGAAGCCAAATaGAATCCGCTTGCCCTCGAC +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGVLEAK*NPLALD
Trigger: GTCGAGGGCAAGCGGATTCCATTTGGCTTCAAGCAC...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGCAGGGCCCTCTCATTaGTATAATCAAAGCGGAACT +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGAGPSH*YNQSGT
Trigger: AGTTCCGCTTTGATTATACCAATGAGAGGGCCCTGC...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGCCAGCGTCACATTCTTaGCAGACACACCAGCATAGT +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGPASHS*QTHQHS
Trigger: ACTATGCTGGTGTGTCTGCCAAGAATGTGACGCTGG...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGAGAGATTCCACCCATaGGACTGGGTGCTGAACCAA +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWERFHP*DWVLNQ
Trigger: TTGGTTCAGCACCCAGTCCCATGGGTGGAATCTCTC...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCAGGTTCCAAGGTGTCATaGCAGGAGAGATTCCACCCA +
Preference number: 4 (lower is better)
Translates to: RQESASETGSRSSPGALPGSKVS*QERFHP
Trigger: TGGGTGGAATCTCTCCTGCCATGACACCTTGGAACC...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGATAGTTGGGACTGGTTaGAGAATAGGATGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGIVGTG*RIGWRG
Trigger: ACCTCTCCATCCTATTCTCCAACCAGTCCCAACTAT...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGGGTGTAATTGGGACTaGTTGGAGAATAGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGGCNWD*LENSSG
Trigger: GCCCGAACTATTCTCCAACCAGTCCCAATTACACCC...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGGTTGGGGTATACTCTaGGGAGCTGGGACTGTAAGA +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGGWGIL*GAGTVR
Trigger: TCTTACAGTCCCAGCTCCCCAGAGTATACCCCAACC...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGGTTGGGGTGTAGACTaGAGAGGTTGGGGAATAAGT +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGGWGVD*RGWGIS
Trigger: ACTTATTCCCCAACCTCTCCAGTCTACACCCCAACC...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGCATCTGAGATGCGTTTaGAGATCTCATGCACTCGCT +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGHLRCV*RSHALA
Trigger: AGCGAGTGCATGAGATCTTCAAACGCATCTCAGATG...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGATGTCAGCCAGTTTGTaGGTCAGGTCATCCTGGTTA +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGMSASL*VRSSWL
Trigger: TAACCAGGATGACCTGACTCACAAACTGGCTGACAT...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGACAATGCCCAGCACCGTaGAGATCTCCACAATGTCAT +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGQCPAP*RSPQCH
Trigger: ATGACATTGTGGAGATCTTCACGGTGCTGGGCATTG...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTAAGCCATCAAAGGAGATaGCGTGGTACAGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: SETGSRSSPGALPQGIYVSHQRR*RGTAPA
Trigger: AGCGGGAGCTGTACCACGTCATCTCCTTTGATGGCT...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACAGCCATCAAAGGAGATaGCGTGGTACAGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNSHQRR*RGTAPA
Trigger: AGCGGGAGCTGTACCACGTCATCTCCTTTGATGGCT...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGACAAAGGAACACTTCATaGGTGGTCCTGTGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGQRNTS*VVLCPG
Trigger: GCCAGGACACAGGACCACTCATGAAGTGTTCCTTTG...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAGAATGCGGTTCACCTaGTTCTCAAACGTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYRMRFT*FSNVCR
Trigger: GCGGCAGACGTTTGAGAATCAGGTGAACCGCATTCT...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGCAGAGTCCGGTGCTTaGAGCCAAATGGAATCCGCT +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNAESGA*SQMESA
Trigger: AGCGGATTCCATTTGGCTTCAAGCACCGGACTCTGC...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACACTGGCTGTTCCCCCTaGGCACTAGTTCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYTGCSP*ALVLEV
Trigger: GACTTCAAGAACTAGTGCGCAGGGGGAACAGCCAGT...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTCGTTTGAAGATCTCATaGACTCGCTCTGGACTCAGC +
Preference number: 4 (lower is better)
Translates to: RSSPGALPQGIYVQRSWARLKIS*TRSGLS
Trigger: GCTGAGTCCAGAGCGAGTGCATGAGATCTTCAAACG...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAATTGCCCTTCAACCGCTaGTTCAGGGACTTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQLPFNR*FRDLRG
Trigger: TCCCCTCAAGTCCCTGAAGCAGCGGTTGAAGGGCAA...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGTTCCTCAACGTTGTATaGTCCAGACGGCACAGAATA +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGFLNVV*SRRHRI
Trigger: TATTCTGTGCCGTCTGGAGCATACAACGTTGAGGAA...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTCATCATCGGGATGGGTaGTGTGGGTACGGATACAAT +
Preference number: 4 (lower is better)
Translates to: RSSPGALPQGIYVQRSWAHHRDG*CGYGYN
Trigger: ATTGTATCCGTACCCACAGCACCCATCCCGATGATG...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGCATCATCGGGATGGGTaGTGTGGGTACGGATACAAT +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWHHRDG*CGYGYN
Trigger: ATTGTATCCGTACCCACAGCACCCATCCCGATGATG...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGGAGCCAGCTGACGTaGCCAGAGACTTCTTACACA +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNGSQLT*PETSYT
Trigger: TGTGTAAGAAGTCTCTGGGCACGTCAGCTGGCTCCC...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAAGGGAGCCAGCTGACGTaGCCAGAGACTTCTTACACA +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQGSQLT*PETSYT
Trigger: TGTGTAAGAAGTCTCTGGGCACGTCAGCTGGCTCCC...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGACAAATGGAATCCGCTTaGCCTCGACGTTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGQMESA*PRRSAV
Trigger: GACAGCAGAACGTCGAGGGCAAGCGGATTCCATTTG...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCATGTTGGACTCGATaGAGCGCAGGAAGACATCAT +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGACWTR*SAGRHH
Trigger: ATGATGTCTTCCTGCGCTGCATCGAGTCCAACATGC...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCATCTGCTCGATGCCCTaGAGGGTCATATCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFICSMP*RVISVS
Trigger: GCTGACAGATATGACCCTGCAGGGCATCGAGCAGAT...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCAGTTCACCGGGAGCTCTaGCACAAGGCATTTATGTAC +
Preference number: 4 (lower is better)
Translates to: RQESASETGSRSSPGALPVHREL*HKAFMY
Trigger: GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGAACAAGACAAGAGTCTaGATCAGAAACGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGNKTRV*IRNGIQ
Trigger: CTGGATCCCGTTTCTGATGCAGACTCTTGTCTTGTT...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAATTTCCTGCACATGTTTaGCAGCGGCCAGTCCGCTCA +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQFPAHV*QRPVRS
Trigger: TGAGCGGACTGGCCGCTGCCAAACATGTGCAGGAAA...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGCATGGCCCTTTTCTTTaGTCAGATCCTCGTCACCCT +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWHGPFL*SDPRHP
Trigger: AGGGTGACGAGGATCTGACCAAAGAAAAGGGCCATG...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACGCTCATTGTCCACCATaGTGGCCACATGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYAHCPP*WPHGTG
Trigger: TCCAGTTCCATGTGGCCACCATGGTGGACAATGAGC...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAATCAAAGGAGATGACGTaGTACAGCTCCCGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQSKEMT*YSSRSR
Trigger: CCTGGAGCGGGAGCTGTACCACGTCATCTCCTTTGA...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGAGTGATGGCCATCAAGTaGCCACGACAGGTCATGGTA +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGVMAIK*PRQVMV
Trigger: TACCATGACCTGTCGTGGCCACTTGATGGCCATCAC...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTAGGCCGGGGATATTGGTaGGGATCTCCATGCCATACT +
Preference number: 4 (lower is better)
Translates to: SETGSRSSPGALPQGIYVGRGYW*GSPCHT
Trigger: AGTATGGCATGGAGATCCCCACCAATATCCCCGGCC...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCAAGTAGATGGCTGTGTTaGCAGTCACCTTCCTCAACG +
Preference number: 4 (lower is better)
Translates to: RQESASETGSRSSPGALPSRWLC*QSPSST
Trigger: CGTTGAGGAAGGTGACTGCCAACACAGCCATCTACT...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCATGGGGTCATAGTAGATaGCTGTGTTGGCAGTCACCT +
Preference number: 4 (lower is better)
Translates to: RQESASETGSRSSPGALPWGHSR*LCWQSP
Trigger: AGGTGACTGCCAACACAGCCATCTACTATGACCCCA...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCAAGGTCATCTGGGTaGCAGGTTCTCCAAGGGACT +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGSRSSG*QVLQGT
Trigger: AGTCCCTTGGAGAACCTGCCACCCAGATGACCTTGA...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCTCAAGGTCATCTGGGTaGCAGGTTCTCCAAGGGACT +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFSRSSG*QVLQGT
Trigger: AGTCCCTTGGAGAACCTGCCACCCAGATGACCTTGA...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCATTCCACCCATGGGACTaGGTGCTGAACCAAAGAACA +
Preference number: 4 (lower is better)
Translates to: RQESASETGSRSSPGALPFHPWD*VLNQRT
Trigger: TGTTCTTTGGTTCAGCACCCAGTCCCATGGGTGGAA...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACGAGAATAGTTCGGGCTaGTGGGTGAGTAACTTGGGG +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYENSSG*WVSNLG
Trigger: CCCCAAGTTACTCACCCACCAGCCCGAACTATTCTC...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCGTGTGTATCGTGGGCTaGAAGGGGAGTAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFVCIVG*KGSNLV
Trigger: CACCAAGTTACTCCCCTTCCAGCCCACGATACACAC...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACCTGTGGTGTGTATCGTaGGCTGGAAGGGGAGTAACT +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYLWCVS*AGRGVT
Trigger: AGTTACTCCCCTTCCAGCCCACGATACACACCACAG...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAAGTAACCAGGGGAAGTaGGAGAGTAGGTTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGSNQGK*ESRLSL
Trigger: AAGGCTCAACCTACTCTCCCACTTCCCCTGGTTACT...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGAAGGATCTTCAATTTaGGGACAGGCAGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNEGSSI*GQAGGG
Trigger: CCCACCCCCTGCCTGTCCCCAAATTGAAGATCCTTC...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGTACTTCACCATCACTaGCTCCATGGACTTGATCAG +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWVLHHH*LHGLDQ
Trigger: CTGATCAAGTCCATGGAGTCAGTGATGGTGAAGTAC...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGAAAACACTCCTCATCTaGGATGCGTTTGAAGATCTC +
Preference number: 4 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGKTLLI*DAFEDL
Trigger: GAGATCTTCAAACGCATCTCAGATGAGGAGTGTTTT...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGCCGCAGCTGATTGTTaGTCTTCACGATGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNAAADC*SSRCQP
Trigger: TGGCTGACATCGTGAAGATCAACAATCAGCTGCGGC...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCTCATTGCGCCGCAGCTaGTTGTTGATCTTCACGATG +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFSLRRS*LLIFTM
Trigger: CATCGTGAAGATCAACAATCAGCTGCGGCGCAATGA...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGATGTGGAAGATTTTCTaGGCATTCCAGATCATCCGC +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGMWKIF*AFQIIR
Trigger: GCGGATGATCTGGAATGCTCAGAAAATCTTCCACAT...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAGGGAAGGCGTGGGTTaGTGTGGAAGATTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYREGVG*CGRFSE
Trigger: CTCAGAAAATCTTCCACATCAACCCACGCCTTCCCT...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGCCAAGTGTCGGTAATTaGCATAGGAGCCATCAAAGG +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWPSVGN*HRSHQR
Trigger: CCTTTGATGGCTCCTATGTCAATTACCGACACTTGG...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGCGGATACAATTGATGTaGCCAGGTATGATGAGGGAG +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWRIQLM*PGMMRE
Trigger: CTCCCTCATCATACCTGGTCACATCAATTGTATCCG...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTAGCGCAATGGCTTGGTTaGACTTGGACTCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: SETGSRSSPGALPQGIYVAQWLG*TWTQSP
Trigger: GGGAGATTGAGTCCAAGTTCAACCAAGCCATTGCGC...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTATGGCGAATAGCTGGGTaGTGTGGGACTATAGTTGGG +
Preference number: 4 (lower is better)
Translates to: SETGSRSSPGALPQGIYVWRIAG*CGTIVG
Trigger: CCCAACTATAGTCCCACATCACCCAGCTATTCGCCA...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGAGTCCTCATTAACGTaGTTCCATTCCGCATACAGC +
Preference number: 4 (lower is better)
Translates to: RSSPGALPQGIYVQRSWAESSLT*FHSAYS
Trigger: GCTGTATGCGGAATGGAAGCACGTTAATGAGGACTC...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGACGTTTGAAGATCTCATaGACTCGCTCTGGACTCAGC +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGRLKIS*TRSGLS
Trigger: GCTGAGTCCAGAGCGAGTGCATGAGATCTTCAAACG...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCAATCCCCGTCAAAGTCTaGATTGTACGGAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: RQESASETGSRSSPGALPIPVKV*IVRSCH
Trigger: GTGACAACTCCGTACAATGCAGACTTTGACGGGGAT...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACAGAGACTGTGGCAGGTaGAAGTTCATCTCATCCCCG +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNRDCGR*KFISSP
Trigger: CGGGGATGAGATGAACTTGCACCTGCCACAGTCTCT...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAAGCTGTGAGTGTGTCCTaGACAATACCCATGACAGGC +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQAVSVS*TIPMTG
Trigger: GCCTGTCATGGGTATTGTGCAGGACACACTCACAGC...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCGCATGTTGGACTCGATaGAGCGCAGGAAGACATCAT +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFACWTR*SAGRHH
Trigger: ATGATGTCTTCCTGCGCTGCATCGAGTCCAACATGC...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAATTGATCAGCCGCCGCTaGATGTATCCAGTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQLISRR*MYPVSA
Trigger: TGCTGAGACTGGATACATCCAGCGGCGGCTGATCAA...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACTCACTGGGCTTGGGGTaGAAACGCAAGTCAATGCGA +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNSLGLG*KRKSMR
Trigger: TCGCATTGACTTGCGTTTCCACCCCAAGCCCAGTGA...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAATCCCTCAGTCGTCTCTaGGTATTTGATGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQSLSRL*VFDATL
Trigger: GAGGGTGGCATCAAATACCCAGAGACGACTGAGGGA...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACCGTGAAACACAGGCTTaGCCAGTTCAATGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYRETQA*PVQCGQ
Trigger: TTGGCCACATTGAACTGGCCAAGCCTGTGTTTCACG...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCCTCATGCACTCGCTCTaGACTCAGCAGGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFLMHSL*TQQDLL
Trigger: AAGAAGATCCTGCTGAGTCCAGAGCGAGTGCATGAG...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACACCATGGTGGCCACATaGAACTGGAGGAGCTTCACA +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNTMVAT*NWRSFT
Trigger: TGTGAAGCTCCTCCAGTTCCATGTGGCCACCATGGT...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGACCCGATGCCCCATCATaGACATTTTGTGCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGPDAPS*TFCAEL
Trigger: CAACTCTGCACAAAATGTCCATGATGGGGCATCGGG...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTAGTGATGGCCATCAAGTaGCCACGACAGGTCATGGTA +
Preference number: 4 (lower is better)
Translates to: SETGSRSSPGALPQGIYVVMAIK*PRQVMV
Trigger: TACCATGACCTGTCGTGGCCACTTGATGGCCATCAC...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACCTTGCTGTCTCCAGTTaGGAAGATGACCCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNLAVSS*EDDPEH
Trigger: GTGCTCAGGGTCATCTTCCCAACTGGAGACAGCAAG...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCTCTTCATCATCGGGATaGGTGCTGTGGGTACGGATA +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFSSSSG*VLWVRI
Trigger: TATCCGTACCCACAGCACCCATCCCGATGATGAAGA...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGATGCGCAATGGCTTaGTTGAACTTGGACTCAATC +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWGCAMA*LNLDSI
Trigger: GATTGAGTCCAAGTTCAACCAAGCCATTGCGCATCC...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGATGCGCAATGGCTTaGTTGAACTTGGACTCAATC +
Preference number: 4 (lower is better)
Translates to: RSSPGALPQGIYVQRSWAGCAMA*LNLDSI
Trigger: GATTGAGTCCAAGTTCAACCAAGCCATTGCGCATCC...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACCCAGCGTCACATTCTTaGCAGACACACCAGCATAGT +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYPASHS*QTHQHS
Trigger: ACTATGCTGGTGTGTCTGCCAAGAATGTGACGCTGG...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTAGAGAGATTCCACCCATaGGACTGGGTGCTGAACCAA +
Preference number: 4 (lower is better)
Translates to: SETGSRSSPGALPQGIYVERFHP*DWVLNQ
Trigger: TTGGTTCAGCACCCAGTCCCATGGGTGGAATCTCTC...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTAGAGAATAGTTCGGGCTaGTGGGTGAGTAACTTGGGG +
Preference number: 4 (lower is better)
Translates to: SETGSRSSPGALPQGIYVENSSG*WVSNLG
Trigger: CCCCAAGTTACTCACCCACCAGCCCGAACTATTCTC...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACGGGTGTAATTGGGACTaGTTGGAGAATAGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYGCNWD*LENSSG
Trigger: GCCCGAACTATTCTCCAACCAGTCCCAATTACACCC...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGTGTTGGAGAGTAGCTTaGAGAGGTTGGGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWCWRVA*RGWAVV
Trigger: AACTACAGCCCAACCTCTCCAAGCTACTCTCCAACA...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAAGTGTGTATCGTGGGCTaGAAGGGGAGTAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQVCIVG*KGSNLV
Trigger: CACCAAGTTACTCCCCTTCCAGCCCACGATACACAC...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCATAGGTTGGAGACTGTaGTGTGTATCGTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFIGWRL*CVSWAG
Trigger: TCCAGCCCACGATACACACCACAGTCTCCAACCTAT...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGAGCTTGGGGTATAGGTTaGAGACTGTGGTGTGTATCG +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGAWGIG*RLWCVS
Trigger: CGATACACACCACAGTCTCCAACCTATACCCCAAGC...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGAAGTAACCAGGGGAAGTaGGAGAGTAGGTTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGSNQGK*ESRLSL
Trigger: AAGGCTCAACCTACTCTCCCACTTCCCCTGGTTACT...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCGTACTTCACCATCACTaGCTCCATGGACTTGATCAG +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFVLHHH*LHGLDQ
Trigger: CTGATCAAGTCCATGGAGTCAGTGATGGTGAAGTAC...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACCATCTGAGATGCGTTTaGAGATCTCATGCACTCGCT +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYHLRCV*RSHALA
Trigger: AGCGAGTGCATGAGATCTTCAAACGCATCTCAGATG...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACATGTCAGCCAGTTTGTaGGTCAGGTCATCCTGGTTA +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYMSASL*VRSSWL
Trigger: TAACCAGGATGACCTGACTCACAAACTGGCTGACAT...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACATTTGCGCACTGCTGTaGGTGTGTCCTGCACAATAC +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNICALL*VCPAQY
Trigger: GTATTGTGCAGGACACACTCACAGCAGTGCGCAAAT...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACTCTCATCGCTGTTCATaGTGCGAATACGGAGCACCA +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNSHRCS*CEYGAP
Trigger: TGGTGCTCCGTATTCGCATCATGAACAGCGATGAGA...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGACGGATACAATTGATGTaGCCAGGTATGATGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGRIQLM*PGMMRE
Trigger: CTCCCTCATCATACCTGGTCACATCAATTGTATCCG...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGAGAGTCCTCATTAACGTaGTTCCATTCCGCATACAGC +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGESSLT*FHSAYS
Trigger: GCTGTATGCGGAATGGAAGCACGTTAATGAGGACTC...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAAAGAAGTCCACTCTTTTaGCCATCAGGTTCCCTCGCA +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQRSPLF*PSGSLA
Trigger: TGCGAGGGAACCTGATGGGCAAAAGAGTGGACTTCT...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACAGAATGCGGACCCGATaGCCCATCATGGACATTTTG +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNRMRTR*PIMDIL
Trigger: CAAAATGTCCATGATGGGGCATCGGGTCCGCATTCT...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGATCTCCATGCCATACTTaGACTTCTCTGCATCAAGCA +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGSPCHT*TSLHQA
Trigger: TGCTTGATGCAGAGAAGTGCAAGTATGGCATGGAGA...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACATCTTTTCAGCAATCTaGTCCATGGTGAGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYIFSAI*SMVSFR
Trigger: CCGGAAGCTCACCATGGAGCAGATTGCTGAAAAGAT...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGACCTCTATTACGTCCTaGTTGGCCTTCTTAATAGTG +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGTSITS*LAFLIV
Trigger: CACTATTAAGAAGGCCAAGCAGGACGTAATAGAGGT...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGTTCACCGGGAGCTCTaGCACAAGGCATTTATGTAC +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNVHREL*HKAFMY
Trigger: GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACTCAATGTGGCCAAAGTaGCCAGGACACTCTGTCATG +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNSMWPK*PGHSVM
Trigger: CATGACAGAGTGTCCTGGCCACTTTGGCCACATTGA...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACCATGGCCCTTTTCTTTaGTCAGATCCTCGTCACCCT +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNHGPFL*SDPRHP
Trigger: AGGGTGACGAGGATCTGACCAAAGAAAAGGGCCATG...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGACATTTTGTGCAGAGTTaGCTGCCGGTTGAAGATAAC +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGHFVQS*LPVEDN
Trigger: GTTATCTTCAACCGGCAGCCAACTCTGCACAAAATG...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACCCCGATGCCCCATCATaGACATTTTGTGCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNPDAPS*TFCAEL
Trigger: CAACTCTGCACAAAATGTCCATGATGGGGCATCGGG...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGTCGGAGGGAAGGCGTaGGTTGATGTGGAAGATTTT +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNVGGKA*VDVEDF
Trigger: AAAATCTTCCACATCAACCCACGCCTTCCCTCCGAC...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACTGGGGTCATAGTAGATaGCTGTGTTGGCAGTCACCT +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNWGHSR*LCWQSP
Trigger: AGGTGACTGCCAACACAGCCATCTACTATGACCCCA...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTATCTTCATCATCGGGATaGGTGCTGTGGGTACGGATA +
Preference number: 4 (lower is better)
Translates to: SETGSRSSPGALPQGIYVSSSSG*VLWVRI
Trigger: TATCCGTACCCACAGCACCCATCCCGATGATGAAGA...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAAGGCACAGAATATCCTTaGCTCTCTCAGCATCTCGAG +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQGTEYP*LSQHLE
Trigger: CTCGAGATGCTGAGAGAGCCAAGGATATTCTGTGCC...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAATATCTGTCAGCATGTTaGACTCGATGCAGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQYLSAC*TRCSAG
Trigger: TCCTGCGCTGCATCGAGTCCAACATGCTGACAGATA...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTAAGTAGGAGGGTGAAGTaGGGGAATAAGAGGGACTCT +
Preference number: 4 (lower is better)
Translates to: SETGSRSSPGALPQGIYVSRRVK*GNKRDS
Trigger: AGAGTCCCTCTTATTCCCCCACTTCACCCTCCTACT...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTATAGTTGGGACTGGTTaGAGAATAGGATGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: RSSPGALPQGIYVQRSWAIVGTG*RIGWRG
Trigger: ACCTCTCCATCCTATTCTCCAACCAGTCCCAACTAT...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCACGTTGGCGAATAGCTaGGTGATGTGGGACTATAGT +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFTLANS*VMWDYS
Trigger: ACTATAGTCCCACATCACCCAGCTATTCGCCAACGT...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATGTTGGAGAGTAGCTTaGAGAGGTTGGGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGCWRVA*RGWAVV
Trigger: AACTACAGCCCAACCTCTCCAAGCTACTCTCCAACA...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAATATACTCTGGGGAGCTaGGACTGTAAGAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQYTLGS*DCKKDW
Trigger: CCAGTCCTTCTTACAGTCCCAGCTCCCCAGAGTATA...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACTATACTCTGGGGAGCTaGGACTGTAAGAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNYTLGS*DCKKDW
Trigger: CCAGTCCTTCTTACAGTCCCAGCTCCCCAGAGTATA...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTAAGGATCTTCTTCTCCTaGGAGTCCTCATTAACGTGC +
Preference number: 4 (lower is better)
Translates to: SETGSRSSPGALPQGIYVRIFFS*ESSLTC
Trigger: GCACGTTAATGAGGACTCTCAGGAGAAGAAGATCCT...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR TCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGACACCAAAACCAGCATTaGTCTTTTCAGCAATCTGCT +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGHQNQH*SFQQSA
Trigger: AGCAGATTGCTGAAAAGATCAATGCTGGTTTTGGTG...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACATCATGGACATTTTGTaGAGAGTTGGCTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNIMDIL*RVGCRL
Trigger: CAACCGGCAGCCAACTCTGCACAAAATGTCCATGAT...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATTCCTCAACGTTGTATaGTCCAGACGGCACAGAATA +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGFLNVV*SRRHRI
Trigger: TATTCTGTGCCGTCTGGAGCATACAACGTTGAGGAA...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGAGCACCAGCTTCTCTaGATTGTCATCATTAAAGAT +
Preference number: 4 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGEHQLL*IVIIKD
Trigger: ATCTTTAATGATGACAATGCAGAGAAGCTGGTGCTC...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAACCTCTATTACGTCCTaGTTGGCCTTCTTAATAGTG +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGTSITS*LAFLIV
Trigger: CACTATTAAGAAGGCCAAGCAGGACGTAATAGAGGT...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACTCTGTCTGTGGCAAGTaGATGTACACCTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNSVCGK*MYTLLI
Trigger: GATCAGCAAGGTGTACATGCACTTGCCACAGACAGA...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAATCTGTCTGTGGCAAGTaGATGTACACCTTGCTGATC +
Preference number: 4 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQSVCGK*MYTLLI
Trigger: GATCAGCAAGGTGTACATGCACTTGCCACAGACAGA...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCCATTTTGTGCAGAGTTaGCTGCCGGTTGAAGATAAC +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFHFVQS*LPVEDN
Trigger: GTTATCTTCAACCGGCAGCCAACTCTGCACAAAATG...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGCAGGGCCCTCTCATTaGTATAATCAAAGCGGAACT +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNAGPSH*YNQSGT
Trigger: AGTTCCGCTTTGATTATACCAATGAGAGGGCCCTGC...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGACTTGTTGTCTGTCTGTaGCAAGTGCATGTACACCTT +
Preference number: 4 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGLVVCL*QVHVHL
Trigger: AAGGTGTACATGCACTTGCCACAGACAGACAACAAG...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACGACTATAGTTGGGACTaGTTGGAGAATAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYDYSWD*LENRME
Trigger: CTCCATCCTATTCTCCAACCAGTCCCAACTATAGTC...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACGTAGACTGGAGAGGTTaGGGAATAAGTAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYVDWRG*GISRRC
Trigger: ACATCTCCTACTTATTCCCCAACCTCTCCAGTCTAC...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGAGCACCAGCTTCTCTaGATTGTCATCATTAAAGAT +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGEHQLL*IVIIKD
Trigger: ATCTTTAATGATGACAATGCAGAGAAGCTGGTGCTC...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGATATCCTTGATCTTTaGGTTGTTAGAGTCCACAAG +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGDILDL*VVRVHK
Trigger: CTTGTGGACTCTAACAACCCAAAGATCAAGGATATC...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCACGACAGCAATGACCTaGGAGATGTTAATCTTGGAA +
Preference number: 4 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFTTAMT*EMLILE
Trigger: TTCCAAGATTAACATCTCCCAGGTCATTGCTGTCGT...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTAAGCGAAGGAGTCTTTaGCTTCTTGGAAATGTTGAT +
Preference number: 4 (lower is better)
Translates to: RSSPGALPQGIYVQRSWAKRRSL*LLGNVD
Trigger: ATCAACATTTCCAAGAAGCCAAAGACTCCTTCGCTT...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAAAGCGAAGGAGTCTTTaGCTTCTTGGAAATGTTGAT +
Preference number: 4 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGKRRSL*LLGNVD
Trigger: ATCAACATTTCCAAGAAGCCAAAGACTCCTTCGCTT...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACATATGTTTTTGCCCTTaGAAAGGTCGTAGACATGTG +
Preference number: 4 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYICFCP*KGRRHV
Trigger: CACATGTCTACGACCTTTGCAAGGGCAAAAACATAT...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR GCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACATACTTGCACTTCTCTaGATCAAGCAGGAGGTCAAA +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNILALL*IKQEVK
Trigger: TTTGACCTCCTGCTTGATGCAGAGAAGTGCAAGTAT...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CCA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACACGACAGCAATGACCTaGGAGATGTTAATCTTGGAA +
Preference number: 4 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNTTAMT*EMLILE
Trigger: TTCCAAGATTAACATCTCCCAGGTCATTGCTGTCGT...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS GCA 90 bp CACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCACCCCACGTaGCCTCAGTTCTCCTCGTCACTGTCATCCGGGCTGATAGCCGGG +
Preference number: 5 (lower is better)
Translates to: HGQAALGPSPLPHPT*PQFSSSLSSGLIAG
Trigger: CCCGGCTATCAGCCCGGATGACAGTGACGAGGAGAACTGAGGGCACGTGGGGTGCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
CDS GCA 90 bp GAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTaGCGCACCCCACGTGCCCTCAGTTCTCCTCGTCACTGTCATCCG +
Preference number: 5 (lower is better)
Translates to: ELHSSTGKLPWALAR*RTPRALSSPRHCHP
Trigger: CGGATGACAGTGACGAGGAGAACTGAGGGCACGTGGGGTGCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCCGCCATAGGCAGGGGTaGCACCCTGGTTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: QELHSSTGKLPWALARCRRHRQG*HPGSKV
Trigger: CACCTTGGAACCAGGGTGCAACCCCTGCCTATGGCG...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS GCA 90 bp AGGCGCAAACCTCACTACAAAAAGCCTGCGCCGCCTCCGCCTAGGTaGTCAGACCTCGTCAGGGCGGCCACCGGGAAGGACCTCCCCGAG +
Preference number: 5 (lower is better)
Translates to: RRKPHYKKPAPPPPR*SDLVRAATGKDLPE
Trigger: CTCGGGGAGGTCCTTCCCGGTGGCCGCCCTGACGAGGTCTGAGCACCTAGGCGGAGGCGGCGCAGGCTTTTTGTAGTGAGGTTTGCGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS-3UTR CAA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCACTCCCTCCACCACTTaGATGGGGTGCAGGTCGGAG +
Preference number: 5 (lower is better)
Translates to: QELHSSTGKLPWALARCRTPSTT*MGCRSE
Trigger: CTCCGACCTGCACCCCATCAAAGTGGTGGAGGGAGT...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCCCAGGCCGGGGATATaGGTGGGGATCTCCATGCCA +
Preference number: 5 (lower is better)
Translates to: REARTAQQHGQAALGPSPPRPGI*VGISMP
Trigger: TGGCATGGAGATCCCCACCAATATCCCCGGCCTGGG...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS TCA 90 bp CTCGCACCCGGCCTTCCTTGCCCTTCAACCGCTGCTTCAGGGACTTaGGGGGACGCCCAGACTTCTGCATGGCACGGGGCAAGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: LAPGLPCPSTAASGT*GDAQTSAWHGASQA
Trigger: TGCCTGGCTTGCCCCGTGCCATGCAGAAGTCTGGGCGTCCCCTCAAGTCCCTGAAGCAGCGGTTGAAGGGCAAGGAAGGCCGGGTGCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 90 bp TCACAACAGCAGGCCGCACGGAGAGCGGGGGCACAGGCAGCACTGTaGCAATCATCCACTCTGGCCGTGCATAGCGGGGCTCCATGCCCA +
Preference number: 5 (lower is better)
Translates to: SQQQAARRAGAQAAL*QSSTLAVHSGAPCP
Trigger: TGGGCATGGAGCCCCGCTATGCACGGCCAGAGTGGATGATTGTCACAGTGCTGCCTGTGCCCCCGCTCTCCGTGCGGCCTGCTGTTGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 90 bp CCCATCAGGTTCCCTCGCACCCGGCCTTCCTTGCCCTTCAACCGCTaGTTCAGGGACTTGAGGGGACGCCCAGACTTCTGCATGGCACGG +
Preference number: 5 (lower is better)
Translates to: PIRFPRTRPSLPFNR*FRDLRGRPDFCMAR
Trigger: CCGTGCCATGCAGAAGTCTGGGCGTCCCCTCAAGTCCCTGAAGCAGCGGTTGAAGGGCAAGGAAGGCCGGGTGCGAGGGAACCTGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS-3UTR CAA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGAGCTGCACCACCTGGTaGATGGAGTTCCGCACAGTC +
Preference number: 5 (lower is better)
Translates to: REARTAQQHGQAALGPSPSCTTW*MEFRTV
Trigger: GACTGTGCGGAACTCCATCAACCAGGTGGTGCAGCT...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGTCCACACCGAACTTGTaGTCCATCTCCTCCCCACCC +
Preference number: 5 (lower is better)
Translates to: REARTAQQHGQAALGPSPSTPNL*SISSPP
Trigger: GGGTGGGGAGGAGATGGACAACAAGTTCGGTGTGGA...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGGGCAGAGTCCGGTGCTaGAAGCCAAATGGAATCCGC +
Preference number: 5 (lower is better)
Translates to: REARTAQQHGQAALGPSPGRVRC*KPNGIR
Trigger: GCGGATTCCATTTGGCTTCAAGCACCGGACTCTGCC...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGGTCGTCTCTGGGTATTaGATGCCACCCTCCGTCACA +
Preference number: 5 (lower is better)
Translates to: REARTAQQHGQAALGPSPVVSGY*MPPSVT
Trigger: TGTGACGGAGGGTGGCATCAAATACCCAGAGACGAC...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGGAGAAGTCCACTCTTTaGCCCATCAGGTTCCCTCGC +
Preference number: 5 (lower is better)
Translates to: REARTAQQHGQAALGPSPEKSTL*PIRFPR
Trigger: GCGAGGGAACCTGATGGGCAAAAGAGTGGACTTCTC...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS TCA 90 bp CGCCTGCCAGGCCGTCTTCGCCGTAGCGCAGCTGCACCACCTGGTTaGTGGAGTTCCGCACAGTCGCGTCGTACTTCACCATCACTGACT +
Preference number: 5 (lower is better)
Translates to: RLPGRLRRSAAAPPG*WSSAQSRRTSPSLT
Trigger: AGTCAGTGATGGTGAAGTACGACGCGACTGTGCGGAACTCCATCAACCAGGTGGTGCAGCTGCGCTACGGCGAAGACGGCCTGGCAGGCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000576114.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 90 bp GGAGGTCAAAGCAGCCAGTGCCGGCCGGAGCCAGCTGGCCCAGCATaGTATTCTCAGAGACCCCCTTCATGGGGTCACTCTCACCGTGTG +
Preference number: 5 (lower is better)
Translates to: GGQSSQCRPEPAGPA*YSQRPPSWGHSHRV
Trigger: CACACGGTGAGAGTGACCCCATGAAGGGGGTCTCTGAGAATATCATGCTGGGCCAGCTGGCTCCGGCCGGCACTGGCTGCTTTGACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000576553.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 90 bp CCCAAGCAGCCAGTCGAAGGCCTCCCCACTGAGCCGAAACTCCTCTaGCATGCGGCGGGAACACAACGTGGACCGCAGGTGGATGTTGAA +
Preference number: 5 (lower is better)
Translates to: PKQPVEGLPTEPKLL*HAAGTQRGPQVDVE
Trigger: TTCAACATCCACCTGCGGTCCACGTTGTGTTCCCGCCGCATGGCAGAGGAGTTTCGGCTCAGTGGGGAGGCCTTCGACTGGCTGCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000574158.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS-3UTR CAA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCGGGATGCGCAATGGCTaGGTTGAACTTGGACTCAAT +
Preference number: 5 (lower is better)
Translates to: QELHSSTGKLPWALARCRGMRNG*VELGLN
Trigger: ATTGAGTCCAAGTTCAACCAAGCCATTGCGCATCCC...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS TCA 90 bp ACTTGGACTCAATCTCCCCAAGCAGCCAGTCGAAGGCCTCCCCACTaGGCCGAAACTCCTCTGCCATGCGGCGGGAACACAACGTGGACC +
Preference number: 5 (lower is better)
Translates to: TWTQSPQAASRRPPH*AETPLPCGGNTTWT
Trigger: GGTCCACGTTGTGTTCCCGCCGCATGGCAGAGGAGTTTCGGCTCAGTGGGGAGGCCTTCGACTGGCTGCTTGGGGAGATTGAGTCCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000574158.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 90 bp GGAAGGCTTAAGCGTAGCCAGGTTCTGGAACTCAACGCTCTCGCCTaGCAGGCCGTCTTCGCCGTAGCGCAGCTGCACCACCTGGTTGAT +
Preference number: 5 (lower is better)
Translates to: GRLKRSQVLELNALA*QAVFAVAQLHHLVD
Trigger: ATCAACCAGGTGGTGCAGCTGCGCTACGGCGAAGACGGCCTGGCAGGCGAGAGCGTTGAGTTCCAGAACCTGGCTACGCTTAAGCCTTCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000576114.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 90 bp GTCCACCATGGTGGCCACATGGAACTGGAGGAGCTTCACATCCTCTaGAATGACATGGGCCGCTGCGCCGTTCTGCTCATTGCGCCGCAG +
Preference number: 5 (lower is better)
Translates to: VHHGGHMELEELHIL*NDMGRCAVLLIAPQ
Trigger: CTGCGGCGCAATGAGCAGAACGGCGCAGCGGCCCATGTCATTGCAGAGGATGTGAAGCTCCTCCAGTTCCATGTGGCCACCATGGTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp GGCAAGCCAGGCAGCTCATTGTCCACCATGGTGGCCACATGGAACTaGAGGAGCTTCACATCCTCTGCAATGACATGGGCCGCTGCGCCG +
Preference number: 5 (lower is better)
Translates to: GKPGSSLSTMVATWN*RSFTSSAMTWAAAP
Trigger: CGGCGCAGCGGCCCATGTCATTGCAGAGGATGTGAAGCTCCTCCAGTTCCATGTGGCCACCATGGTGGACAATGAGCTGCCTGGCTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp GCATCAAGCAGGAGGTCAAAGCAGCCAGTGCCGGCCGGAGCCAGCTaGCCCAGCATGATATTCTCAGAGACCCCCTTCATGGGGTCACTC +
Preference number: 5 (lower is better)
Translates to: ASSRRSKQPVPAGAS*PSMIFSETPFMGSL
Trigger: GAGTGACCCCATGAAGGGGGTCTCTGAGAATATCATGCTGGGCCAGCTGGCTCCGGCCGGCACTGGCTGCTTTGACCTCCTGCTTGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000576553.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp GGGAGAAGATTTGCTTGCCTGTCCACAGGGGCCGGGGCTTTAGGATaGCCGGCTGTGGGACCTTCCCATCCCACGTCGACAGGAACATCA +
Preference number: 5 (lower is better)
Translates to: GRRFACLSTGAGALG*PAVGPSHPTSTGTS
Trigger: TGATGTTCCTGTCGACGTGGGATGGGAAGGTCCCACAGCCGGCCATCCTAAAGCCCCGGCCCCTGTGGACAGGCAAGCAAATCTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000575547.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS-3UTR CAA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCCCGTCAAAGTCTGCATaGTACGGAGTTGTCACACTA +
Preference number: 5 (lower is better)
Translates to: QELHSSTGKLPWALARCRPSKSA*YGVVTL
Trigger: TAGTGTGACAACTCCGTACAATGCAGACTTTGACGG...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGCCCAGGCCGGGGATATaGGTGGGGATCTCCATGCCA +
Preference number: 5 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGPRPGI*VGISMP
Trigger: TGGCATGGAGATCCCCACCAATATCCCCGGCCTGGG...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCTCCTCCTCTTGCATCTaGTTCTCATCGCTGTTCATG +
Preference number: 5 (lower is better)
Translates to: QELHSSTGKLPWALARCRSSSCI*FSSLFM
Trigger: CATGAACAGCGATGAGAACAAGATGCAAGAGGAGGA...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCACCTCTTCCTCCTCTaGCATCTTGTTCTCATCGCT +
Preference number: 5 (lower is better)
Translates to: REARTAQQHGQAALGPSPHLFLL*HLVLIA
Trigger: AGCGATGAGAACAAGATGCAAGAGGAGGAAGAGGTG...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGAGCTTGGGGTATAGGTaGGAGACTGTGGTGTGTATC +
Preference number: 5 (lower is better)
Translates to: REARTAQQHGQAALGPSPSLGYR*ETVVCI
Trigger: GATACACACCACAGTCTCCAACCTATACCCCAAGCT...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS TCA 90 bp CCATGGTGGCCACATGGAACTGGAGGAGCTTCACATCCTCTGCAATaGCATGGGCCGCTGCGCCGTTCTGCTCATTGCGCCGCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: PWWPHGTGGASHPLQ*HGPLRRSAHCAAAD
Trigger: ATCAGCTGCGGCGCAATGAGCAGAACGGCGCAGCGGCCCATGTCATTGCAGAGGATGTGAAGCTCCTCCAGTTCCATGTGGCCACCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 90 bp CCTCTGCCATGCGGCGGGAACACAACGTGGACCGCAGGTGGATGTTaGAGAGCAGCGTGGCATTTTCCTGGGCCTGTCGACTTAGTGGGT +
Preference number: 5 (lower is better)
Translates to: PLPCGGNTTWTAGGC*RAAWHFPGPVDLVG
Trigger: ACCCACTAAGTCGACAGGCCCAGGAAAATGCCACGCTGCTCTTCAACATCCACCTGCGGTCCACGTTGTGTTCCCGCCGCATGGCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000574158.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 90 bp GCCGGGGATATTGGTGGGGATCTCCATGCCATACTTGCACTTCTCTaGATCAAGCAGGAGGTCAAAGCAGCCAGTGCCGGCCGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: AGDIGGDLHAILALL*IKQEVKAASAGRSQ
Trigger: CTGGCTCCGGCCGGCACTGGCTGCTTTGACCTCCTGCTTGATGCAGAGAAGTGCAAGTATGGCATGGAGATCCCCACCAATATCCCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000576553.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 90 bp GCATCCGCTCAAATTCCCGCTCCAACTCGTTCTGGATGTGTGCGTTaGTCAGCACGTCCTTCACCAGGTCCTCCTGCAGAGTGCGCCGCA +
Preference number: 5 (lower is better)
Translates to: ASAQIPAPTRSGCVR*SARPSPGPPAECAA
Trigger: TGCGGCGCACTCTGCAGGAGGACCTGGTGAAGGACGTGCTGAGCAACGCACACATCCAGAACGAGTTGGAGCGGGAATTTGAGCGGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000576718.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 90 bp CTCCCGCATCCGCTCAAATTCCCGCTCCAACTCGTTCTGGATGTGTaGGTTGCTCAGCACGTCCTTCACCAGGTCCTCCTGCAGAGTGCG +
Preference number: 5 (lower is better)
Translates to: LPHPLKFPLQLVLDV*VAQHVLHQVLLQSA
Trigger: CGCACTCTGCAGGAGGACCTGGTGAAGGACGTGCTGAGCAACGCACACATCCAGAACGAGTTGGAGCGGGAATTTGAGCGGATGCGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000576718.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 90 bp CATTCCACTCCCAACACTGGGGGACCAGGCGCCATAGGCAGGGGTTaGACCCTGGTTCCAAGGTGTCATGGCAGGAGAGATTCCACCCAT +
Preference number: 5 (lower is better)
Translates to: HSTPNTGGPGAIGRG*TLVPRCHGRRDSTH
Trigger: ATGGGTGGAATCTCTCCTGCCATGACACCTTGGAACCAGGGTGCAACCCCTGCCTATGGCGCCTGGTCCCCCAGTGTTGGGAGTGGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp GTCACAGACATTCGCTTCAGTTCATCCGGACTCAGGACTCCGAACTaGACTCTCTTGATGGTGCGCAGCGGGCATGCGCTGTCCCCCGAG +
Preference number: 5 (lower is better)
Translates to: VTDIRFSSSGLRTPN*TLLMVRSGHALSPE
Trigger: CTCGGGGGACAGCGCATGCCCGCTGCGCACCATCAAGAGAGTCCAGTTCGGAGTCCTGAGTCCGGATGAACTGAAGCGAATGTCTGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp CGTGCTTCCATTCCGCATACAGCTCTAGGCCAGAACGCCGGATCCTaGGCTGGTACCGCCCACAGCCACCATGGCCCTTTTCTTTGGTCA +
Preference number: 5 (lower is better)
Translates to: RASIPHTALGQNAGS*AGTAHSHHGPFLWS
Trigger: TGACCAAAGAAAAGGGCCATGGTGGCTGTGGGCGGTACCAGCCCAGGATCCGGCGTTCTGGCCTAGAGCTGTATGCGGAATGGAAGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp GCACGGGGCAAGCCAGGCAGCTCATTGTCCACCATGGTGGCCACATaGAACTGGAGGAGCTTCACATCCTCTGCAATGACATGGGCCGCT +
Preference number: 5 (lower is better)
Translates to: ARGKPGSSLSTMVAT*NWRSFTSSAMTWAA
Trigger: AGCGGCCCATGTCATTGCAGAGGATGTGAAGCTCCTCCAGTTCCATGTGGCCACCATGGTGGACAATGAGCTGCCTGGCTTGCCCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp TCCCGATCCTCCCGCATCCGCTCAAATTCCCGCTCCAACTCGTTCTaGATGTGTGCGTTGCTCAGCACGTCCTTCACCAGGTCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SRSSRIRSNSRSNSF*MCALLSTSFTRSSC
Trigger: GCAGGAGGACCTGGTGAAGGACGTGCTGAGCAACGCACACATCCAGAACGAGTTGGAGCGGGAATTTGAGCGGATGCGGGAGGATCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000576718.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS-3UTR CAA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGAAGGACCTCCCCGAGTaGGGAGGAAAAAGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGKDLPE*GGKSRR
Trigger: CCTCCGGCTTTTTCCTCCCAACTCGGGGAGGTCCTT...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGCACTCCTGCAGGGCCTaGAATTCCCCATCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGHSCRA*NSPSSV
Trigger: CACGGAGGATGGGGAATTCAAGGCCCTGCAGGAGTG...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS TCA 90 bp CTAACCCAGCCTGCCCTATCTTGGAAAGCTTTCTGCTCAGGTGGCTaGGAGAGGCCCTGGCCTGCTACGTGCCTTATAGCCGGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LTQPALSWKAFCSGG*ERPWPATCLIAGLQ
Trigger: CTGCAGACCGGCTATAAGGCACGTAGCAGGCCAGGGCCTCTCTCAGCCACCTGAGCAGAAAGCTTTCCAAGATAGGGCAGGCTGGGTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576952.1
CDS CCA 90 bp TGGCCTAACCCAGCCTGCCCTATCTTGGAAAGCTTTCTGCTCAGGTaGCTGAGAGAGGCCCTGGCCTGCTACGTGCCTTATAGCCGGTCT +
Preference number: 5 (lower is better)
Translates to: WPNPACPILESFLLR*LREALACYVPYSRS
Trigger: AGACCGGCTATAAGGCACGTAGCAGGCCAGGGCCTCTCTCAGCCACCTGAGCAGAAAGCTTTCCAAGATAGGGCAGGCTGGGTTAGGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576952.1
CDS CCA 90 bp TTCCATTCCGCATACAGCTCTAGGCCAGAACGCCGGATCCTGGGCTaGTACCGCCCACAGCCACCATGGCCCTTTTCTTTGGTCAGATCC +
Preference number: 5 (lower is better)
Translates to: FHSAYSSRPERRILG*YRPQPPWPFSLVRS
Trigger: GGATCTGACCAAAGAAAAGGGCCATGGTGGCTGTGGGCGGTACCAGCCCAGGATCCGGCGTTCTGGCCTAGAGCTGTATGCGGAATGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp CGAAACTCCTCTGCCATGCGGCGGGAACACAACGTGGACCGCAGGTaGATGTTGAAGAGCAGCGTGGCATTTTCCTGGGCCTGTCGACTT +
Preference number: 5 (lower is better)
Translates to: RNSSAMRREHNVDRR*MLKSSVAFSWACRL
Trigger: AAGTCGACAGGCCCAGGAAAATGCCACGCTGCTCTTCAACATCCACCTGCGGTCCACGTTGTGTTCCCGCCGCATGGCAGAGGAGTTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000574158.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp CCTGTGTCCTGGCGGTTGACTCCGTGTCGGGTGATGGCCATCAAGTaGCCACGACAGGTCATGGTATCACACAAGAGAGCCAAGTGTCGG +
Preference number: 5 (lower is better)
Translates to: PVSWRLTPCRVMAIK*PRQVMVSHKRAKCR
Trigger: CCGACACTTGGCTCTCTTGTGTGATACCATGACCTGTCGTGGCCACTTGATGGCCATCACCCGACACGGAGTCAACCGCCAGGACACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000576553.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp GGGCCTCATACTCACGTCCAGCAGCCCCCAGGCCGGGGATATTGGTaGGGATCTCCATGCCATACTTGCACTTCTCTGCATCAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: GPHTHVQQPPGRGYW*GSPCHTCTSLHQAG
Trigger: TCCTGCTTGATGCAGAGAAGTGCAAGTATGGCATGGAGATCCCCACCAATATCCCCGGCCTGGGGGCTGCTGGACGTGAGTATGAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576553.1
CDS CCA 90 bp AGAACATGCCGGTGGGTCCAGCAGCCCCCAGGCCGGGGATATTGGTaGGGATCTCCATGCCATACTTGCACTTCTCTGCATCAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: RTCRWVQQPPGRGYW*GSPCHTCTSLHQAG
Trigger: TCCTGCTTGATGCAGAGAAGTGCAAGTATGGCATGGAGATCCCCACCAATATCCCCGGCCTGGGGGCTGCTGGACCCACCGGCATGTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp ACCAGGCGCCATAGGCAGGGGTTGCACCCTGGTTCCAAGGTGTCATaGCAGGAGAGATTCCACCCATGGGACTGGGTGCTGAACCAAAGA +
Preference number: 5 (lower is better)
Translates to: TRRHRQGLHPGSKVS*QERFHPWDWVLNQR
Trigger: TCTTTGGTTCAGCACCCAGTCCCATGGGTGGAATCTCTCCTGCCATGACACCTTGGAACCAGGGTGCAACCCCTGCCTATGGCGCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS-3UTR CAA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGTCCGCAAAGGTCATGTaGGCAGCAATGGAGCGGGGC +
Preference number: 5 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGSAKVM*AAMERG
Trigger: GCCCCGCTCCATTGCTGCCAACATGACCTTTGCGGA...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGTCTCGGATGATGTACTaGGCGCCTGGGTACTGGCTG +
Preference number: 5 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGSRMMY*APGYWL
Trigger: CAGCCAGTACCCAGGCGCCAAGTACATCATCCGAGA...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGAGGGAGAAGATTTGCTaGCCTGTCCACAGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGREKIC*PVHRGR
Trigger: CCGGCCCCTGTGGACAGGCAAGCAAATCTTCTCCCT...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAAGAGGTTACGGCAGTTaGTCTCTCCCCCTTCCGGGA +
Preference number: 5 (lower is better)
Translates to: PAPHQATGKEGSSIWGQARGYGS*SLPLPG
Trigger: TCCCGGAAGGGGGAGAGACAAACTGCCGTAACCTCT...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGCTGCCGCTCTATTACGTCCTGCTaGGCCTTCTTAATAGTGTTC +
Preference number: 5 (lower is better)
Translates to: QELHSSTGKLPWALARCRSITSC*AFLIVF
Trigger: GAACACTATTAAGAAGGCCAAGCAGGACGTAATAGA...GCGGCAGCGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS TCA 90 bp GGGTGCAGGTCGGAGGGAAGGCGTGGGTTGATGTGGAAGATTTTCTaGGCATTCCAGATCATCCGCAGCAGGTTACAGGGGAGGACGACC +
Preference number: 5 (lower is better)
Translates to: GCRSEGRRGLMWKIF*AFQIIRSRLQGRTT
Trigger: GGTCGTCCTCCCCTGTAACCTGCTGCGGATGATCTGGAATGCTCAGAAAATCTTCCACATCAACCCACGCCTTCCCTCCGACCTGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000576718.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 90 bp GAGGAGCCAGTCTTGTCTCGGGCATCGTTAAGAATGCGGTTCACCTaGTTCTCAAACGTCTGCCGCAGAGTGTTCCCTGGGGTGGGCTCC +
Preference number: 5 (lower is better)
Translates to: EEPVLSRASLRMRFT*FSNVCRRVFPGVGS
Trigger: GGAGCCCACCCCAGGGAACACTCTGCGGCAGACGTTTGAGAATCAGGTGAACCGCATTCTTAACGATGCCCGAGACAAGACTGGCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 90 bp ATCTTGGAAAGCTTTCTGCTCAGGTGGCTGAGAGAGGCCCTGGCCTaGTACGTGCCTTATAGCCGGTCTGCAGGTGAAGGTCACTGGGCT +
Preference number: 5 (lower is better)
Translates to: ILESFLLRWLREALA*YVPYSRSAGEGHWA
Trigger: AGCCCAGTGACCTTCACCTGCAGACCGGCTATAAGGCACGTAGCAGGCCAGGGCCTCTCTCAGCCACCTGAGCAGAAAGCTTTCCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576952.1
CDS GCA 90 bp GGGGGTGACAATCATGCGAGGAACCATGGCCAGCTCCTGGATCTCTaGTCGCGTCTCCAGAGACTGTGGCAGGTGCAAGTTCATCTCATC +
Preference number: 5 (lower is better)
Translates to: GGDNHARNHGQLLDL*SRLQRLWQVQVHLI
Trigger: GATGAGATGAACTTGCACCTGCCACAGTCTCTGGAGACGCGAGCAGAGATCCAGGAGCTGGCCATGGTTCCTCGCATGATTGTCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000575547.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 90 bp AGCACCCGCATCAAGCTCACGCCGTCCGTCTCCAGGATCCACTCCTaGAGGGCCTTGAATTCCCCATCCTCCGTGATGATGATCTTCTTC +
Preference number: 5 (lower is better)
Translates to: STRIKLTPSVSRIHS*RALNSPSSVMMIFF
Trigger: GAAGAAGATCATCATCACGGAGGATGGGGAATTCAAGGCCCTGCAGGAGTGGATCCTGGAGACGGACGGCGTGAGCTTGATGCGGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp GCTGTGAGTGTGTCCTGCACAATACCCATGACAGGCCGATTGCTCTaGGGGGTGACAATCATGCGAGGAACCATGGCCAGCTCCTGGATC +
Preference number: 5 (lower is better)
Translates to: AVSVSCTIPMTGRLL*GVTIMRGTMASSWI
Trigger: GATCCAGGAGCTGGCCATGGTTCCTCGCATGATTGTCACCCCCCAGAGCAATCGGCCTGTCATGGGTATTGTGCAGGACACACTCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000575547.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS-3UTR CAA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGACTGACTCCATGGACTaGATCAGCCGCCGCTGGATG +
Preference number: 5 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGTDSMD*ISRRWM
Trigger: CATCCAGCGGCGGCTGATCAAGTCCATGGAGTCAGT...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCATGTGTGAGCCGCTTCTaGGGCTGTCCCTTGGACTTA +
Preference number: 5 (lower is better)
Translates to: PAPHQATGKEGSSIWGQACVSRF*GCPLDL
Trigger: TAAGTCCAAGGGACAGCCCAAGAAGCGGCTCACACA...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGACGCTGCTTCAGGGACTaGAGGGGACGCCCAGACTTC +
Preference number: 5 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGRCFRD*RGRPDF
Trigger: GAAGTCTGGGCGTCCCCTCAAGTCCCTGAAGCAGCG...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACCGCACCCGGCCTTCCTaGCCCTTCAACCGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYRTRPS*PFNRCF
Trigger: GAAGCAGCGGTTGAAGGGCAAGGAAGGCCGGGTGCG...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACCTGTGTCCTGGCGGTaGACTCCGTGTCGGGTGATG +
Preference number: 5 (lower is better)
Translates to: RQESASETGSRSSPGALPPVSWR*TPCRVM
Trigger: CATCACCCGACACGGAGTCAACCGCCAGGACACAGG...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGGAGGCAAGAACTGCACAGCAGCACGGGCAAGCTGCCCTGGGCCCTAGCCCGTCACCAAAACCAGCATaGATCTTTTCAGCAATCTGC +
Preference number: 5 (lower is better)
Translates to: REARTAQQHGQAALGPSPSPKPA*IFSAIC
Trigger: GCAGATTGCTGAAAAGATCAATGCTGGTTTTGGTGA...CGGGCTAGGGCCCAGGGCAGCTTGCCCGTGCTGCTGTGCAGTTCTTGCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGGTGGGCTCCAGCTCATaGTTGTGTGCCTTCTCGATG +
Preference number: 5 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGVGSSS*LCAFSM
Trigger: CATCGAGAAGGCACACAACAATGAGCTGGAGCCCAC...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGCGCCATAGGCAGGGGTaGCACCCTGGTTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWRHRQG*HPGSKV
Trigger: CACCTTGGAACCAGGGTGCAACCCCTGCCTATGGCG...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGTGGAAGGGGAGTAACTaGGTGAGGTCGGGGAATAGC +
Preference number: 5 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGWKGSN*VRSGNS
Trigger: GCTATTCCCCGACCTCACCAAGTTACTCCCCTTCCA...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS TCA 90 bp GCTTGGGGTGGAAACGCAAGTCAATGCGATCACCATTGTCTCGGATaGTGTACTTGGCGCCTGGGTACTGGCTGTTCCCCCTGCGCACTA +
Preference number: 5 (lower is better)
Translates to: AWGGNASQCDHHCLG*CTWRLGTGCSPCAL
Trigger: TAGTGCGCAGGGGGAACAGCCAGTACCCAGGCGCCAAGTACATCATCCGAGACAATGGTGATCGCATTGACTTGCGTTTCCACCCCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000576952.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 90 bp CATGGGCCGCTGCGCCGTTCTGCTCATTGCGCCGCAGCTGATTGTTaGTCTTCACGATGTCAGCCAGTTTGTGAGTCAGGTCATCCTGGT +
Preference number: 5 (lower is better)
Translates to: HGPLRRSAHCAAADC*SSRCQPVCESGHPG
Trigger: ACCAGGATGACCTGACTCACAAACTGGCTGACATCGTGAAGATCAACAATCAGCTGCGGCGCAATGAGCAGAACGGCGCAGCGGCCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 90 bp ATCTTTTCAGCAATCTGCTCCATGGTGAGCTTCCGGTCAGTCATGTaGTTCCGATCCAGCTCCACCCGCAACAGCCAGGGGGAGATTCGG +
Preference number: 5 (lower is better)
Translates to: IFSAICSMVSFRSVM*FRSSSTRNSQGEIR
Trigger: CCGAATCTCCCCCTGGCTGTTGCGGGTGGAGCTGGATCGGAAGCACATGACTGACCGGAAGCTCACCATGGAGCAGATTGCTGAAAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000573603.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp TCCACCGTTTCCTCAAAGGAACACTTCATGAGTGGTCCTGTGTCCTaGCGGTTGACTCCGTGTCGGGTGATGGCCATCAAGTGGCCACGA +
Preference number: 5 (lower is better)
Translates to: STVSSKEHFMSGPVS*RLTPCRVMAIKWPR
Trigger: TCGTGGCCACTTGATGGCCATCACCCGACACGGAGTCAACCGCCAGGACACAGGACCACTCATGAAGTGTTCCTTTGAGGAAACGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000576553.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp GATCCTCTGCCACCACCGTGCTCTGGGGGTTGGGGTCATAGTAGATaGCTGTGTTGGCAGTCACCTTCCTCAACGTTGTATGCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: DPLPPPCSGGWGHSR*LCWQSPSSTLYAPD
Trigger: GTCTGGAGCATACAACGTTGAGGAAGGTGACTGCCAACACAGCCATCTACTATGACCCCAACCCCCAGAGCACGGTGGTGGCAGAGGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000573603.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp CATTCACCCATTCCTGATCCTCTGCCACCACCGTGCTCTGGGGGTTaGGGTCATAGTAGATGGCTGTGTTGGCAGTCACCTTCCTCAACG +
Preference number: 5 (lower is better)
Translates to: HSPIPDPLPPPCSGG*GHSRWLCWQSPSST
Trigger: CGTTGAGGAAGGTGACTGCCAACACAGCCATCTACTATGACCCCAACCCCCAGAGCACGGTGGTGGCAGAGGATCAGGAATGGGTGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000573603.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS-3UTR CAA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGATCCGCAAAGGTCATGTaGGCAGCAATGGAGCGGGGC +
Preference number: 5 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGSAKVM*AAMERG
Trigger: GCCCCGCTCCATTGCTGCCAACATGACCTTTGCGGA...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCATTCTTGGGCTGTCCCTaGGACTTAGCCAGGATATCC +
Preference number: 5 (lower is better)
Translates to: PAPHQATGKEGSSIWGQAFLGCP*DLARIS
Trigger: GGATATCCTGGCTAAGTCCAAGGGACAGCCCAAGAA...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAACGCACCCGGCCTTCCTaGCCCTTCAACCGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQRTRPS*PFNRCF
Trigger: GAAGCAGCGGTTGAAGGGCAAGGAAGGCCGGGTGCG...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTACTCCCTCCACCACTTaGATGGGGTGCAGGTCGGAG +
Preference number: 5 (lower is better)
Translates to: RSSPGALPQGIYVQRSWATPSTT*MGCRSE
Trigger: CTCCGACCTGCACCCCATCAAAGTGGTGGAGGGAGT...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAGGGGAGGACGACCTaGCTGTCTCCAGTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: RQESASETGSRSSPGALPQGRTT*LSPVGK
Trigger: CTTCCCAACTGGAGACAGCAAGGTCGTCCTCCCCTG...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGCGGCACAGAATATCCTaGGCTCTCTCAGCATCTCGA +
Preference number: 5 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGRHRIS*ALSASR
Trigger: TCGAGATGCTGAGAGAGCCAAGGATATTCTGTGCCG...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGTGGAAGGGGAGTAACTaGGTGAGGTCGGGGAATAGC +
Preference number: 5 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGWKGSN*VRSGNS
Trigger: GCTATTCCCCGACCTCACCAAGTTACTCCCCTTCCA...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS TCA 90 bp CCGTGCATAGCGGGGCTCCATGCCCAGCACAAAACACTCCTCATCTaGGATGCGTTTGAAGATCTCATGCACTCGCTCTGGACTCAGCAG +
Preference number: 5 (lower is better)
Translates to: PCIAGLHAQHKTLLI*DAFEDLMHSLWTQQ
Trigger: CTGCTGAGTCCAGAGCGAGTGCATGAGATCTTCAAACGCATCTCAGATGAGGAGTGTTTTGTGCTGGGCATGGAGCCCCGCTATGCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 90 bp CTGGATCCCAATGAACGAGACAGACTCAGATGGCCTAACCCAGCCTaGCCTATCTTGGAAAGCTTTCTGCTCAGGTGGCTGAGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: LDPNERDRLRWPNPA*PILESFLLRWLREA
Trigger: GGCCTCTCTCAGCCACCTGAGCAGAAAGCTTTCCAAGATAGGGCAGGCTGGGTTAGGCCATCTGAGTCTGTCTCGTTCATTGGGATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576952.1
CDS GCA 90 bp ATGGAACTGGAGGAGCTTCACATCCTCTGCAATGACATGGGCCGCTaGGCCGTTCTGCTCATTGCGCCGCAGCTGATTGTTGATCTTCAC +
Preference number: 5 (lower is better)
Translates to: MELEELHILCNDMGR*AVLLIAPQLIVDLH
Trigger: GTGAAGATCAACAATCAGCTGCGGCGCAATGAGCAGAACGGCGCAGCGGCCCATGTCATTGCAGAGGATGTGAAGCTCCTCCAGTTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 90 bp GCCAGCTCCTGGATCTCTGCTCGCGTCTCCAGAGACTGTGGCAGGTaGAAGTTCATCTCATCCCCGTCAAAGTCTGCATTGTACGGAGTT +
Preference number: 5 (lower is better)
Translates to: ASSWISARVSRDCGR*KFISSPSKSALYGV
Trigger: AACTCCGTACAATGCAGACTTTGACGGGGATGAGATGAACTTGCACCTGCCACAGTCTCTGGAGACGCGAGCAGAGATCCAGGAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000575547.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp CTTGCACCCCAGAGCCCCACTGCCCACTTAAGCCAGGTTTCCATTTaGACCACACACCCGCTCCAGGAAGACGTCTCTCTTGGTGAATTT +
Preference number: 5 (lower is better)
Translates to: LAPQSPTAHLSQVSI*TTHPLQEDVSLGEF
Trigger: AAATTCACCAAGAGAGACGTCTTCCTGGAGCGGGTGTGTGGTCCAAATGGAAACCTGGCTTAAGTGGGCAGTGGGGCTCTGGGGTGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572844.1
CDS CCA 90 bp GACTCCCTCCACCACTTTGATGGGGTGCAGGTCGGAGGGAAGGCGTaGGTTGATGTGGAAGATTTTCTGAGCATTCCAGATCATCCGCAG +
Preference number: 5 (lower is better)
Translates to: DSLHHFDGVQVGGKA*VDVEDFLSIPDHPQ
Trigger: CTGCGGATGATCTGGAATGCTCAGAAAATCTTCCACATCAACCCACGCCTTCCCTCCGACCTGCACCCCATCAAAGTGGTGGAGGGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000574158.1
ENST00000576718.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp AACGTGGACCGCAGGTGGATGTTGAAGAGCAGCGTGGCATTTTCCTaGGCCTGTCGACTTAGTGGGTCATCCCCATTCACAATCACCAGC +
Preference number: 5 (lower is better)
Translates to: NVDRRWMLKSSVAFS*ACRLSGSSPFTITS
Trigger: GCTGGTGATTGTGAATGGGGATGACCCACTAAGTCGACAGGCCCAGGAAAATGCCACGCTGCTCTTCAACATCCACCTGCGGTCCACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000574158.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS-3UTR CAA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGCCAGTCTCAGCAGTCTaGACAGCCGTGTCAATGAGC +
Preference number: 5 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGPVSAV*TAVSMS
Trigger: GCTCATTGACACGGCTGTCAAGACTGCTGAGACTGG...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAACTGACTCCATGGACTaGATCAGCCGCCGCTGGATG +
Preference number: 5 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGTDSMD*ISRRWM
Trigger: CATCCAGCGGCGGCTGATCAAGTCCATGGAGTCAGT...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAAGGACCTCCCCGAGTaGGGAGGAAAAAGCCGGAGG +
Preference number: 5 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYKDLPE*GGKSRR
Trigger: CCTCCGGCTTTTTCCTCCCAACTCGGGGAGGTCCTT...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACCCGAACTGGACTCTCTaGATGGTGCGCAGCGGGCAT +
Preference number: 5 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYPNWTL*MVRSGH
Trigger: ATGCCCGCTGCGCACCATCAAGAGAGTCCAGTTCGG...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCGTTTCCTGCACATGTTaGGCAGCGGCCAGTCCGCTC +
Preference number: 5 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFVSCTC*AAASPL
Trigger: GAGCGGACTGGCCGCTGCCAAACATGTGCAGGAAAC...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAGAGTCCACAAGCAGTTaGGAGCAGAAGAAGCAGACA +
Preference number: 5 (lower is better)
Translates to: PAPHQATGKEGSSIWGQAESTSS*EQKKQT
Trigger: TGTCTGCTTCTTCTGCTCCAAACTGCTTGTGGACTC...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAACGCTGCTTCAGGGACTaGAGGGGACGCCCAGACTTC +
Preference number: 5 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQRCFRD*RGRPDF
Trigger: GAAGTCTGGGCGTCCCCTCAAGTCCCTGAAGCAGCG...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAACCTGTGTCCTGGCGGTaGACTCCGTGTCGGGTGATG +
Preference number: 5 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQPVSWR*TPCRVM
Trigger: CATCACCCGACACGGAGTCAACCGCCAGGACACAGG...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGACAGGGGAGGACGACCTaGCTGTCTCCAGTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGQGRTT*LSPVGK
Trigger: CTTCCCAACTGGAGACAGCAAGGTCGTCCTCCCCTG...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGCAGAGTCCGGTGCTaGAAGCCAAATGGAATCCGC +
Preference number: 5 (lower is better)
Translates to: RSSPGALPQGIYVQRSWAGRVRC*KPNGIR
Trigger: GCGGATTCCATTTGGCTTCAAGCACCGGACTCTGCC...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGATATCTGTCAGCATGTaGGACTCGATGCAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGISVSM*DSMQRR
Trigger: CCTGCGCTGCATCGAGTCCAACATGCTGACAGATAT...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGACGTAGGCAGGTGACGTaGGCGAGTAGCTGGGAGACA +
Preference number: 5 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGRRQVT*ASSWET
Trigger: TGTCTCCCAGCTACTCGCCAACGTCACCTGCCTACG...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGTGTAATTGGGACTGGTaGGAGAATAGTTCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGCNWDW*ENSSGW
Trigger: CCAGCCCGAACTATTCTCCAACCAGTCCCAATTACA...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAAGCTTGGGGTATAGGTaGGAGACTGTGGTGTGTATC +
Preference number: 5 (lower is better)
Translates to: PAPHQATGKEGSSIWGQASLGYR*ETVVCI
Trigger: GATACACACCACAGTCTCCAACCTATACCCCAAGCT...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGAAGGATCTTCAATTaGGGGACAGGCAGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: RSSPGALPQGIYVQRSWAGRIFN*GTGRGW
Trigger: CCACCCCCTGCCTGTCCCCAAATTGAAGATCCTTCC...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS GCA 90 bp GGTTTATACCACCCCCACCCTGAATGCCAGAGACCAACAGCTCCCTaGACACCTGGGCAGCAACAGCCTTTAACAAGACAGTCAAGTCTG +
Preference number: 5 (lower is better)
Translates to: GLYHPHPECQRPTAP*TPGQQQPLTRQSSL
Trigger: CAGACTTGACTGTCTTGTTAAAGGCTGTTGCTGCCCAGGTGTGCAGGGAGCTGTTGGTCTCTGGCATTCAGGGTGGGGGTGGTATAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576952.1
CDS CCA 90 bp AACCATGGCCAGCTCCTGGATCTCTGCTCGCGTCTCCAGAGACTGTaGCAGGTGCAAGTTCATCTCATCCCCGTCAAAGTCTGCATTGTA +
Preference number: 5 (lower is better)
Translates to: NHGQLLDLCSRLQRL*QVQVHLIPVKVCIV
Trigger: TACAATGCAGACTTTGACGGGGATGAGATGAACTTGCACCTGCCACAGTCTCTGGAGACGCGAGCAGAGATCCAGGAGCTGGCCATGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000575547.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp TTCCATAAGCACGTCCACCGTTTCCTCAAAGGAACACTTCATGAGTaGTCCTGTGTCCTGGCGGTTGACTCCGTGTCGGGTGATGGCCAT +
Preference number: 5 (lower is better)
Translates to: FHKHVHRFLKGTLHE*SCVLAVDSVSGDGH
Trigger: ATGGCCATCACCCGACACGGAGTCAACCGCCAGGACACAGGACCACTCATGAAGTGTTCCTTTGAGGAAACGGTGGACGTGCTTATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000576553.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS-3UTR CAA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACCAGTCTCAGCAGTCTaGACAGCCGTGTCAATGAGC +
Preference number: 5 (lower is better)
Translates to: RQESASETGSRSSPGALPPVSAV*TAVSMS
Trigger: GCTCATTGACACGGCTGTCAAGACTGCTGAGACTGG...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAACCGAACTGGACTCTCTaGATGGTGCGCAGCGGGCAT +
Preference number: 5 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQPNWTL*MVRSGH
Trigger: ATGCCCGCTGCGCACCATCAAGAGAGTCCAGTTCGG...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGTCGTCTCTGGGTATTaGATGCCACCCTCCGTCACA +
Preference number: 5 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWVVSGY*MPPSVT
Trigger: TGTGACGGAGGGTGGCATCAAATACCCAGAGACGAC...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTAGTTTCCTGCACATGTTaGGCAGCGGCCAGTCCGCTC +
Preference number: 5 (lower is better)
Translates to: SETGSRSSPGALPQGIYVVSCTC*AAASPL
Trigger: GAGCGGACTGGCCGCTGCCAAACATGTGCAGGAAAC...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAACAATCACCAGCTTCTaGCTCAATTCCTTGACTCCC +
Preference number: 5 (lower is better)
Translates to: PAPHQATGKEGSSIWGQATITSF*LNSLTP
Trigger: GGGAGTCAAGGAATTGAGCAAGAAGCTGGTGATTGT...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGACCGCAGGTGGATGTaGAAGAGCAGCGTGGCATTT +
Preference number: 5 (lower is better)
Translates to: RSSPGALPQGIYVQRSWADRRWM*KSSVAF
Trigger: AAATGCCACGCTGCTCTTCAACATCCACCTGCGGTC...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGACCGCAGGTGGATGTaGAAGAGCAGCGTGGCATTT +
Preference number: 5 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGDRRWM*KSSVAF
Trigger: AAATGCCACGCTGCTCTTCAACATCCACCTGCGGTC...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGATGGCTTGGTTGAACTaGGACTCAATCTCCCCAAGC +
Preference number: 5 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGMAWLN*DSISPS
Trigger: GCTTGGGGAGATTGAGTCCAAGTTCAACCAAGCCAT...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAATCTCCATGCCATACTaGCACTTCTCTGCATCAAGC +
Preference number: 5 (lower is better)
Translates to: PAPHQATGKEGSSIWGQAISMPY*HFSASS
Trigger: GCTTGATGCAGAGAAGTGCAAGTATGGCATGGAGAT...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTAAGGGAGAAGATTTGCTaGCCTGTCCACAGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: SETGSRSSPGALPQGIYVREKIC*PVHRGR
Trigger: CCGGCCCCTGTGGACAGGCAAGCAAATCTTCTCCCT...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGATGAGGGAGAAGATTaGCTTGCCTGTCCACAGGGG +
Preference number: 5 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGDEGED*LACPQG
Trigger: CCCCTGTGGACAGGCAAGCAAATCTTCTCCCTCATC...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGCTCCAGCTCATTGTaGTGTGCCTTCTCGATGACC +
Preference number: 5 (lower is better)
Translates to: RSSPGALPQGIYVQRSWAGSSSL*CAFSMT
Trigger: GGTCATCGAGAAGGCACACAACAATGAGCTGGAGCC...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGCTCCAGCTCATTGTaGTGTGCCTTCTCGATGACC +
Preference number: 5 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWGSSSL*CAFSMT
Trigger: GGTCATCGAGAAGGCACACAACAATGAGCTGGAGCC...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCAGAGGAGCCAGTCTaGTCTCGGGCATCGTTAAGA +
Preference number: 5 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGAEEPV*SRASLR
Trigger: TCTTAACGATGCCCGAGACAAGACTGGCTCCTCTGC...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGACATCATCATCCATCTaGTCCACCACCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGTSSSI*STTSSS
Trigger: GGAGGAAGAGGTGGTGGACAAGATGGATGATGATGT...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACGTAGGCAGGTGACGTaGGCGAGTAGCTGGGAGACA +
Preference number: 5 (lower is better)
Translates to: SETGSRSSPGALPQGIYVRRQVT*ASSWET
Trigger: TGTCTCCCAGCTACTCGCCAACGTCACCTGCCTACG...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS GCA 90 bp CATGATATTCTCAGAGACCCCCTTCATGGGGTCACTCTCACCGTGTaGGGCTGCTTCCATAAGCACGTCCACCGTTTCCTCAAAGGAACA +
Preference number: 5 (lower is better)
Translates to: HDILRDPLHGVTLTV*GCFHKHVHRFLKGT
Trigger: TGTTCCTTTGAGGAAACGGTGGACGTGCTTATGGAAGCAGCCGCACACGGTGAGAGTGACCCCATGAAGGGGGTCTCTGAGAATATCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000576553.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 90 bp GCTCGATGCCCTGCAGGGTCATATCTGTCAGCATGTTGGACTCGATaGAGCGCAGGAAGACATCATCATCCATCTTGTCCACCACCTCTT +
Preference number: 5 (lower is better)
Translates to: ARCPAGSYLSACWTR*SAGRHHHPSCPPPL
Trigger: AAGAGGTGGTGGACAAGATGGATGATGATGTCTTCCTGCGCTGCATCGAGTCCAACATGCTGACAGATATGACCCTGCAGGGCATCGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp GTCATCCTTGATGAAGTGAGGCAGAGTCCGGTGCTTGAAGCCAAATaGAATCCGCTTGCCCTCGACGTTCTGCTGTCCAACGACAGCAAT +
Preference number: 5 (lower is better)
Translates to: VILDEVRQSPVLEAK*NPLALDVLLSNDSN
Trigger: ATTGCTGTCGTTGGACAGCAGAACGTCGAGGGCAAGCGGATTCCATTTGGCTTCAAGCACCGGACTCTGCCTCACTTCATCAAGGATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp AGACGGCACAGAATATCCTTGGCTCTCTCAGCATCTCGAGCGGACTaGCCCAACAGGAAGACAGTAAGCGAAGGAGTCTTTGGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: RRHRISLALSASRAD*PNRKTVSEGVFGFL
Trigger: CAAGAAGCCAAAGACTCCTTCGCTTACTGTCTTCCTGTTGGGCCAGTCCGCTCGAGATGCTGAGAGAGCCAAGGATATTCTGTGCCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS-3UTR CAA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACTCTCGGATGATGTACTaGGCGCCTGGGTACTGGCTG +
Preference number: 5 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNSRMMY*APGYWL
Trigger: CAGCCAGTACCCAGGCGCCAAGTACATCATCCGAGA...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGAGCGCAAAACTTTCATaGTCTTCACCAGGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGSAKLS*SSPGSP
Trigger: TGGGCTTCCTGGTGAAGACAATGAAAGTTTTGCGCT...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACTCCACACCGAACTTGTaGTCCATCTCCTCCCCACCC +
Preference number: 5 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNSTPNL*SISSPP
Trigger: GGGTGGGGAGGAGATGGACAACAAGTTCGGTGTGGA...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCATGTTCCACACCGAACTaGTTGTCCATCTCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: RQESASETGSRSSPGALPCSTPN*LSISSP
Trigger: TGGGGAGGAGATGGACAACAAGTTCGGTGTGGAACA...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACCCATGGCCCTTTTCTTaGGTCAGATCCTCGTCACCC +
Preference number: 5 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYPWPFS*VRSSSP
Trigger: GGGTGACGAGGATCTGACCAAAGAAAAGGGCCATGG...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTATGGTCAATGGAGAGGTaGGGGTCGGGGGTGATGACA +
Preference number: 5 (lower is better)
Translates to: SETGSRSSPGALPQGIYVWSMER*GSGVMT
Trigger: TGTCATCACCCCCGACCCCAACCTCTCCATTGACCA...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACTGGTCAATGGAGAGGTaGGGGTCGGGGGTGATGACA +
Preference number: 5 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNWSMER*GSGVMT
Trigger: TGTCATCACCCCCGACCCCAACCTCTCCATTGACCA...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGTCTCTCTTGGTGAATTaGCGCACTGCTGTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGSLLVN*RTAVSV
Trigger: CACACTCACAGCAGTGCGCAAATTCACCAAGAGAGA...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGACAATCACCAGCTTCTaGCTCAATTCCTTGACTCCC +
Preference number: 5 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGTITSF*LNSLTP
Trigger: GGGAGTCAAGGAATTGAGCAAGAAGCTGGTGATTGT...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGATCACCTTCCTCAACGTaGTATGCTCCAGACGGCACA +
Preference number: 5 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGSPSST*YAPDGT
Trigger: TGTGCCGTCTGGAGCATACAACGTTGAGGAAGGTGA...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAAAGAGGTTACGGCAGTTaGTCTCTCCCCCTTCCGGGA +
Preference number: 5 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQRGYGS*SLPLPG
Trigger: TCCCGGAAGGGGGAGAGACAAACTGCCGTAACCTCT...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCGTGGGCTCCAGCTCATaGTTGTGTGCCTTCTCGATG +
Preference number: 5 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFVGSSS*LCAFSM
Trigger: CATCGAGAAGGCACACAACAATGAGCTGGAGCCCAC...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCGCAGAGGAGCCAGTCTaGTCTCGGGCATCGTTAAGA +
Preference number: 5 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFAEEPV*SRASLR
Trigger: TCTTAACGATGCCCGAGACAAGACTGGCTCCTCTGC...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGCGGCACAGAATATCCTaGGCTCTCTCAGCATCTCGA +
Preference number: 5 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWRHRIS*ALSASR
Trigger: TCGAGATGCTGAGAGAGCCAAGGATATTCTGTGCCG...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTAAGTGCATGTACACCTaGCTGATCTGCTCGATGCCC +
Preference number: 5 (lower is better)
Translates to: RSSPGALPQGIYVQRSWAKCMYT*LICSMP
Trigger: GGGCATCGAGCAGATCAGCAAGGTGTACATGCACTT...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGATGATCTTCTTCTTGTaGTCTGTCTGTGGCAAGTGC +
Preference number: 5 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGMIFFL*SVCGKC
Trigger: GCACTTGCCACAGACAGACAACAAGAAGAAGATCAT...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGATGTAGCTGGGTGAGCTaGGGGTATAGGTTGGAGACT +
Preference number: 5 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGCSWVS*GYRLET
Trigger: AGTCTCCAACCTATACCCCAAGCTCACCCAGCTACA...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTAGGAAGGATCTTCAATTaGGGGACAGGCAGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: SETGSRSSPGALPQGIYVGRIFN*GTGRGW
Trigger: CCACCCCCTGCCTGTCCCCAAATTGAAGATCCTTCC...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS TCA 90 bp CAGACACAGCGCAAAACTTTCATTGTCTTCACCAGGAAGCCCACGTaGAACACAGGCTTGGCCAGTTCAATGTGGCCAAAGTGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: QTQRKTFIVFTRKPT*NTGLASSMWPKWPG
Trigger: TCCTGGCCACTTTGGCCACATTGAACTGGCCAAGCCTGTGTTTCACGTGGGCTTCCTGGTGAAGACAATGAAAGTTTTGCGCTGTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 90 bp GGGGCTCCATGCCCAGCACAAAACACTCCTCATCTGAGATGCGTTTaGAGATCTCATGCACTCGCTCTGGACTCAGCAGGATCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: GAPCPAQNTPHLRCV*RSHALALDSAGSSS
Trigger: AGAAGAAGATCCTGCTGAGTCCAGAGCGAGTGCATGAGATCTTCAAACGCATCTCAGATGAGGAGTGTTTTGTGCTGGGCATGGAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 90 bp CTAAGATTCAAGCGAAAGGTAGACCATGGGAGAATGCGGACCCGATaGCCCATCATGGACATTTTGTGCAGAGTTGGCTGCCGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: LRFKRKVDHGRMRTR*PIMDILCRVGCRLK
Trigger: CTTCAACCGGCAGCCAACTCTGCACAAAATGTCCATGATGGGGCATCGGGTCCGCATTCTCCCATGGTCTACCTTTCGCTTGAATCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000575547.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 90 bp TTTCATAGTAGACATTCACCCATTCCTGATCCTCTGCCACCACCGTaGTCTGGGGGTTGGGGTCATAGTAGATGGCTGTGTTGGCAGTCA +
Preference number: 5 (lower is better)
Translates to: FHSRHSPIPDPLPPP*SGGWGHSRWLCWQS
Trigger: TGACTGCCAACACAGCCATCTACTATGACCCCAACCCCCAGAGCACGGTGGTGGCAGAGGATCAGGAATGGGTGAATGTCTACTATGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000573603.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 90 bp GTCCGGTGCTTGAAGCCAAATGGAATCCGCTTGCCCTCGACGTTCTaGTGTCCAACGACAGCAATGACCTGGGAGATGTTAATCTTGGAA +
Preference number: 5 (lower is better)
Translates to: VRCLKPNGIRLPSTF*CPTTAMTWEMLILE
Trigger: TTCCAAGATTAACATCTCCCAGGTCATTGCTGTCGTTGGACAGCAGAACGTCGAGGGCAAGCGGATTCCATTTGGCTTCAAGCACCGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS-3UTR CAA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGTTCTCAAAAGCCTTGTaGGAAGGCTTAAGCGTAGCC +
Preference number: 5 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGFSKAL*EGLSVA
Trigger: GGCTACGCTTAAGCCTTCCAACAAGGCTTTTGAGAA...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGTCAATGCGATCACCATaGTCTCGGATGATGTACTTG +
Preference number: 5 (lower is better)
Translates to: SSPGALPQGIYVQRSWAGSMRSP*SRMMYL
Trigger: CAAGTACATCATCCGAGACAATGGTGATCGCATTGA...CCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGTTAGCCAGGATATCCTaGATCTTTGGGTTGTTAGAG +
Preference number: 5 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGLARIS*IFGLLE
Trigger: CTCTAACAACCCAAAGATCAAGGATATCCTGGCTAA...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACTTCTTGGGCTGTCCCTaGGACTTAGCCAGGATATCC +
Preference number: 5 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYFLGCP*DLARIS
Trigger: GGATATCCTGGCTAAGTCCAAGGGACAGCCCAAGAA...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTATGTGTGAGCCGCTTCTaGGGCTGTCCCTTGGACTTA +
Preference number: 5 (lower is better)
Translates to: SETGSRSSPGALPQGIYVCVSRF*GCPLDL
Trigger: TAAGTCCAAGGGACAGCCCAAGAAGCGGCTCACACA...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAACCATGGCCCTTTTCTTaGGTCAGATCCTCGTCACCC +
Preference number: 5 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQPWPFS*VRSSSP
Trigger: GGGTGACGAGGATCTGACCAAAGAAAAGGGCCATGG...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGTCATCTGAGATGCGTTaGAAGATCTCATGCACTCGC +
Preference number: 5 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGSSEMR*KISCTR
Trigger: GCGAGTGCATGAGATCTTCAAACGCATCTCAGATGA...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGAGAAGTCCACTCTTTaGCCCATCAGGTTCCCTCGC +
Preference number: 5 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNEKSTL*PIRFPR
Trigger: GCGAGGGAACCTGATGGGCAAAAGAGTGGACTTCTC...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGTCTCTCTTGGTGAATTaGCGCACTGCTGTGAGTGTG +
Preference number: 5 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWSLLVN*RTAVSV
Trigger: CACACTCACAGCAGTGCGCAAATTCACCAAGAGAGA...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAAGGAAGACGTCTCTCTaGGTGAATTTGCGCACTGCT +
Preference number: 5 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGRKTSL*VNLRTA
Trigger: AGCAGTGCGCAAATTCACCAAGAGAGACGTCTTCCT...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAAATCTCCACAATGTCATaGGACGTGGTGCGTACGGGG +
Preference number: 5 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQISTMS*DVVRTG
Trigger: CCCCGTACGCACCACGTCCAATGACATTGTGGAGAT...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACATCTCCACAATGTCATaGGACGTGGTGCGTACGGGG +
Preference number: 5 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNISTMS*DVVRTG
Trigger: CCCCGTACGCACCACGTCCAATGACATTGTGGAGAT...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp GTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTGGGGTCACCAAAACCAGCATaGATCTTTTCAGCAATCTGC +
Preference number: 5 (lower is better)
Translates to: VHRELCHKAFMYNGAGLGSPKPA*IFSAIC
Trigger: GCAGATTGCTGAAAAGATCAATGCTGGTTTTGGTGA...CCCCAGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTAGATGAGGGAGAAGATTaGCTTGCCTGTCCACAGGGG +
Preference number: 5 (lower is better)
Translates to: SETGSRSSPGALPQGIYVDEGED*LACPQG
Trigger: CCCCTGTGGACAGGCAAGCAAATCTTCTCCCTCATC...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTATTCTGGATGTGTGCGTaGCTCAGCACGTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: SETGSRSSPGALPQGIYVFWMCA*LSTSFT
Trigger: GGTGAAGGACGTGCTGAGCAACGCACACATCCAGAA...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACCCAAATGGAATCCGCTaGCCCTCGACGTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNPNGIR*PSTFCC
Trigger: ACAGCAGAACGTCGAGGGCAAGCGGATTCCATTTGG...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGACACCTCTTCCTCCTCTaGCATCTTGTTCTCATCGCT +
Preference number: 5 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGHLFLL*HLVLIA
Trigger: AGCGATGAGAACAAGATGCAAGAGGAGGAAGAGGTG...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGACATCATCATCCATCTaGTCCACCACCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWTSSSI*STTSSS
Trigger: GGAGGAAGAGGTGGTGGACAAGATGGATGATGATGT...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTTGTAATTGGGACTGGTaGGAGAATAGTTCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: RSSPGALPQGIYVQRSWACNWDW*ENSSGW
Trigger: CCAGCCCGAACTATTCTCCAACCAGTCCCAATTACA...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAATGTTGGAGAGTAGCTaGGAGAGGTTGGGCTGTAGT +
Preference number: 5 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGMLESS*ERLGCS
Trigger: ACTACAGCCCAACCTCTCCAAGCTACTCTCCAACAT...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCAAAGGCAGCTTTAGCTTaGTTCTTCCCGAGGATCAGC +
Preference number: 5 (lower is better)
Translates to: RQESASETGSRSSPGALPKAALA*FFPRIS
Trigger: GCTGATCCTCGGGAAGAACAAAGCTAAAGCTGCCTT...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS GCA 90 bp AAAGTCAGGCATTTCATAGTAGACATTCACCCATTCCTGATCCTCTaGCACCACCGTGCTCTGGGGGTTGGGGTCATAGTAGATGGCTGT +
Preference number: 5 (lower is better)
Translates to: KVRHFIVDIHPFLIL*HHRALGVGVIVDGC
Trigger: ACAGCCATCTACTATGACCCCAACCCCCAGAGCACGGTGGTGGCAGAGGATCAGGAATGGGTGAATGTCTACTATGAAATGCCTGACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000573603.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp ACAAGACAGTCAAGTCTGGATCCCAATGAACGAGACAGACTCAGATaGCCTAACCCAGCCTGCCCTATCTTGGAAAGCTTTCTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: TRQSSLDPNERDRLR*PNPACPILESFLLR
Trigger: CCTGAGCAGAAAGCTTTCCAAGATAGGGCAGGCTGGGTTAGGCCATCTGAGTCTGTCTCGTTCATTGGGATCCAGACTTGACTGTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576952.1
CDS-3UTR CAA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCAAGCGCAAAACTTTCATaGTCTTCACCAGGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: RQESASETGSRSSPGALPSAKLS*SSPGSP
Trigger: TGGGCTTCCTGGTGAAGACAATGAAAGTTTTGCGCT...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAATGTTCCACACCGAACTaGTTGTCCATCTCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQCSTPN*LSISSP
Trigger: TGGGGAGGAGATGGACAACAAGTTCGGTGTGGAACA...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGATCATCTGAGATGCGTTaGAAGATCTCATGCACTCGC +
Preference number: 5 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGSSEMR*KISCTR
Trigger: GCGAGTGCATGAGATCTTCAAACGCATCTCAGATGA...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCATTCTTGCTCAATTCCTaGACTCCCTCCACCACTTTG +
Preference number: 5 (lower is better)
Translates to: RQESASETGSRSSPGALPFLLNS*TPSTTL
Trigger: CAAAGTGGTGGAGGGAGTCAAGGAATTGAGCAAGAA...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAATCTCCATGCCATACTaGCACTTCTCTGCATCAAGC +
Preference number: 5 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGISMPY*HFSASS
Trigger: GCTTGATGCAGAGAAGTGCAAGTATGGCATGGAGAT...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGGACAGGCAGACACGACCATAGACTaGAAGTTATTGTATTCAGAC +
Preference number: 5 (lower is better)
Translates to: PAPHQATGKEGSSIWGQADTTID*KLLYSD
Trigger: GTCTGAATACAATAACTTCAAGTCTATGGTCGTGTC...TGCCTGTCCCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGAGCTGGGCTTGGGAGATGTTAATCTaGGAACCTTTAGCTCCGGAC +
Preference number: 5 (lower is better)
Translates to: RSSPGALPQGIYVQRSWAWEMLI*EPLAPD
Trigger: GTCCGGAGCTAAAGGTTCCAAGATTAACATCTCCCA...AGCCCAGCTCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACGGATGGGAGATGTTAATCTaGGAACCTTTAGCTCCGGAC +
Preference number: 5 (lower is better)
Translates to: RDPEVHRELCHKAFMYNGWEMLI*EPLAPD
Trigger: GTCCGGAGCTAAAGGTTCCAAGATTAACATCTCCCA...TCCGTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACTGCGCAATGGCTTGGTaGAACTTGGACTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYCAMAW*NLDSIS
Trigger: GGAGATTGAGTCCAAGTTCAACCAAGCCATTGCGCA...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCGGGATGCGCAATGGCTaGGTTGAACTTGGACTCAAT +
Preference number: 5 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFGMRNG*VELGLN
Trigger: ATTGAGTCCAAGTTCAACCAAGCCATTGCGCATCCC...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCAGGCTTCTTGGAAATGTaGATGAGCTCCTTAAGTCGG +
Preference number: 5 (lower is better)
Translates to: RQESASETGSRSSPGALPGFLEM*MSSLSR
Trigger: CCGACTTAAGGAGCTCATCAACATTTCCAAGAAGCC...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAAAAGTGCATGTACACCTaGCTGATCTGCTCGATGCCC +
Preference number: 5 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQKCMYT*LICSMP
Trigger: GGGCATCGAGCAGATCAGCAAGGTGTACATGCACTT...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGAATGTTGGAGAGTAGCTaGGAGAGGTTGGGCTGTAGT +
Preference number: 5 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGMLESS*ERLGCS
Trigger: ACTACAGCCCAACCTCTCCAAGCTACTCTCCAACAT...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTATGTAGCTGGGTGAGCTaGGGGTATAGGTTGGAGACT +
Preference number: 5 (lower is better)
Translates to: SETGSRSSPGALPQGIYVCSWVS*GYRLET
Trigger: AGTCTCCAACCTATACCCCAAGCTCACCCAGCTACA...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS TCA 90 bp TCTTCATCATCGGGATGGGTGCTGTGGGTACGGATACAATTGATGTaGCCAGGTATGATGAGGGAGAAGATTTGCTTGCCTGTCCACAGG +
Preference number: 5 (lower is better)
Translates to: SSSSGWVLWVRIQLM*PGMMREKICLPVHR
Trigger: CCTGTGGACAGGCAAGCAAATCTTCTCCCTCATCATACCTGGTCACATCAATTGTATCCGTACCCACAGCACCCATCCCGATGATGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 90 bp AAACTTTCATTGTCTTCACCAGGAAGCCCACGTGAAACACAGGCTTaGCCAGTTCAATGTGGCCAAAGTGGCCAGGACACTCTGTCATGT +
Preference number: 5 (lower is better)
Translates to: KLSLSSPGSPRETQA*PVQCGQSGQDTLSC
Trigger: ACATGACAGAGTGTCCTGGCCACTTTGGCCACATTGAACTGGCCAAGCCTGTGTTTCACGTGGGCTTCCTGGTGAAGACAATGAAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS-3UTR CAA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATTCTCAAAAGCCTTGTaGGAAGGCTTAAGCGTAGCC +
Preference number: 5 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGFSKAL*EGLSVA
Trigger: GGCTACGCTTAAGCCTTCCAACAAGGCTTTTGAGAA...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTAGAGTCCACAAGCAGTTaGGAGCAGAAGAAGCAGACA +
Preference number: 5 (lower is better)
Translates to: SETGSRSSPGALPQGIYVESTSS*EQKKQT
Trigger: TGTCTGCTTCTTCTGCTCCAAACTGCTTGTGGACTC...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp ACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGGTTAGCCAGGATATCCTaGATCTTTGGGTTGTTAGAG +
Preference number: 5 (lower is better)
Translates to: TLYPPRIKPQARKDLQFGLARIS*IFGLLE
Trigger: CTCTAACAACCCAAAGATCAAGGATATCCTGGCTAA...CCCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACAGAGTTGGCTGCCGGTaGAAGATAACAATGTCCCCA +
Preference number: 5 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNRVGCR*KITMSP
Trigger: TGGGGACATTGTTATCTTCAACCGGCAGCCAACTCT...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACAACAGGAAGACGTCTCTCTaGGTGAATTTGCGCACTGCT +
Preference number: 5 (lower is better)
Translates to: KRDPEVHRELCHKAFMYNRKTSL*VNLRTA
Trigger: AGCAGTGCGCAAATTCACCAAGAGAGACGTCTTCCT...GTTGTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAAATGGCTTGGTTGAACTaGGACTCAATCTCCCCAAGC +
Preference number: 5 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQMAWLN*DSISPS
Trigger: GCTTGGGGAGATTGAGTCCAAGTTCAACCAAGCCAT...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGACAAGAGTCTGCATCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCAATGATCTTCTTCTTGTaGTCTGTCTGTGGCAAGTGC +
Preference number: 5 (lower is better)
Translates to: RQESASETGSRSSPGALPMIFFL*SVCGKC
Trigger: GCACTTGCCACAGACAGACAACAAGAAGAAGATCAT...TGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGATGCAGACTCTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTAAAGGCAGCTTTAGCTTaGTTCTTCCCGAGGATCAGC +
Preference number: 5 (lower is better)
Translates to: SETGSRSSPGALPQGIYVKAALA*FFPRIS
Trigger: GCTGATCCTCGGGAAGAACAAAGCTAAAGCTGCCTT...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp TACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCAATTTGGTTCTTCTCAAAAGCCTaGTTGGAAGGCTTAAGCGTA +
Preference number: 5 (lower is better)
Translates to: YPLPAPHQATGKEGSSIWFFSKA*LEGLSV
Trigger: TACGCTTAAGCCTTCCAACAAGGCTTTTGAGAAGAA...CCAAATTGAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAACCGTCAAAGTCTGCATaGTACGGAGTTGTCACACTA +
Preference number: 5 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQPSKSA*YGVVTL
Trigger: TAGTGTGACAACTCCGTACAATGCAGACTTTGACGG...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAATTCTTGCTCAATTCCTaGACTCCCTCCACCACTTTG +
Preference number: 5 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQFLLNS*TPSTTL
Trigger: CAAAGTGGTGGAGGGAGTCAAGGAATTGAGCAAGAA...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS GCA 90 bp CAGAGACTGTGGCAGGTGCAAGTTCATCTCATCCCCGTCAAAGTCTaGATTGTACGGAGTTGTCACACTAAGATTCAAGCGAAAGGTAGA +
Preference number: 5 (lower is better)
Translates to: QRLWQVQVHLIPVKV*IVRSCHTKIQAKGR
Trigger: TCTACCTTTCGCTTGAATCTTAGTGTGACAACTCCGTACAATGCAGACTTTGACGGGGATGAGATGAACTTGCACCTGCCACAGTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000575547.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS-3UTR CAA 90 bp CCTAAGTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATTCTTCTCAAAAGCCTaGTTGGAAGGCTTAAGCGTA +
Preference number: 5 (lower is better)
Translates to: PKLKYPLPAPHQATGKEGFFSKA*LEGLSV
Trigger: TACGCTTAAGCCTTCCAACAAGGCTTTTGAGAAGAA...TCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAACTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAATCAATGCGATCACCATaGTCTCGGATGATGTACTTG +
Preference number: 5 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQSMRSP*SRMMYL
Trigger: CAAGTACATCATCCGAGACAATGGTGATCGCATTGA...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp GTTAAAATACCCTTTACCCGCCCCGCATCAAGCCACAGGCAAGGAAGGATCTTCACCAGCTTCTCTGCATaGTCATCATTAAAGATGCAG +
Preference number: 5 (lower is better)
Translates to: VKIPFTRPASSHRQGRIFTSFSA*SSLKMQ
Trigger: CTGCATCTTTAATGATGACAATGCAGAGAAGCTGGT...GAAGATCCTTCCTTGCCTGTGGCTTGATGCGGGGCGGGTAAAGGGTATTTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS-3UTR CAA 90 bp CAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTACACCAGCTTCTCTGCATaGTCATCATTAAAGATGCAG +
Preference number: 5 (lower is better)
Translates to: QKRDPEVHRELCHKAFMYTSFSA*SSLKMQ
Trigger: CTGCATCTTTAATGATGACAATGCAGAGAAGCTGGT...GTACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS GCA 90 bp TTTTATACATGTGACACGCTGACTTCTAGGACCCCCATTACCTCTTaGATCTTGTTCTCATCGCTGTTCATGATGCGAATACGGAGCACC +
Preference number: 5 (lower is better)
Translates to: FYTCDTLTSRTPITS*ILFSSLFMMRIRST
Trigger: GGTGCTCCGTATTCGCATCATGAACAGCGATGAGAACAAGATGCAAGAGGTAATGGGGGTCCTAGAAGTCAGCGTGTCACATGTATAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573603.1
CDS-3UTR CAA 90 bp TCAGAAACGGGATCCAGAAGTTCACCGGGAGCTCTGCCACAAGGCATTTATGTATCTATTACGTCCTGCTaGGCCTTCTTAATAGTGTTC +
Preference number: 5 (lower is better)
Translates to: SETGSRSSPGALPQGIYVSITSC*AFLIVF
Trigger: GAACACTATTAAGAAGGCCAAGCAGGACGTAATAGA...TACATAAATGCCTTGTGGCAGAGCTCCCGGTGAACTTCTGGATCCCGTTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS GCA 90 bp CAGAACCTACAGAACCTATTCTGTAGGTTGTGGACAGAAGTGGGCTaGTCTTGGAAACCACAGAAGTCAACAGGTAAAAGGAGGAAAAGA +
Preference number: 5 (lower is better)
Translates to: QNLQNLFCRLWTEVG*SWKPQKSTGKRRKR
Trigger: TCTTTTCCTCCTTTTACCTGTTGACTTCTGTGGTTTCCAAGAGCAGCCCACTTCTGTCCACAACCTACAGAATAGGTTCTGTAGGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574158.1
CDS GCA 90 bp GTTCTCATCGCTGTTCATGATGCGAATACGGAGCACCAGCTTCTCTaGATTGTCATCATTAAAGATGCAGTTCAAGTCGTCACCAAAACC +
Preference number: 5 (lower is better)
Translates to: VLIAVHDANTEHQLL*IVIIKDAVQVVTKT
Trigger: GGTTTTGGTGACGACTTGAACTGCATCTTTAATGATGACAATGCAGAGAAGCTGGTGCTCCGTATTCGCATCATGAACAGCGATGAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000573603.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS-3UTR CAA 90 bp AGGAGTGAGAACACCACTGGGCCAGTGAGTTCTAACAGCACAAGTGGAGAACAAGACACGACCATAGACTaGAAGTTATTGTATTCAGAC +
Preference number: 5 (lower is better)
Translates to: RSENTTGPVSSNSTSGEQDTTID*KLLYSD
Trigger: GTCTGAATACAATAACTTCAAGTCTATGGTCGTGTC...TTGTTCTCCACTTGTGCTGTTAGAACTCACTGGCCCAGTGGTGTTCTCACTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643490.2
ENST00000645939.2
CDS TCA 90 bp GATAACAATGTCCCCATCACACATGTGCCGTTCCACCTAGAGAGGTaGGGTAAGGAAAAGGTCTCAGTGAAGGAGGTATCTAAGAATAAA +
Preference number: 5 (lower is better)
Translates to: DNNVPITHVPFHLER*GKEKVSVKEVSKNK
Trigger: TTTATTCTTAGATACCTCCTTCACTGAGACCTTTTCCTTACCTCACCTCTCTAGGTGGAACGGCACATGTGTGATGGGGACATTGTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575547.1
CDS GCA 72 bp GCTGCCCTGGGCCCTAGCCCGCTGCCGCACCCCACGTaGCCTCAGTTCTCCTCGTCACTGTCATCCGGGCTG +
Preference number: 6 (lower is better)
Translates to: AALGPSPLPHPT*PQFSSSLSSGL
Trigger: CAGCCCGGATGACAGTGACGAGGAGAACTGAGGGCACGTGGGGTGCGGCAGCGGGCTAGGGCCCAGGGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
CDS CAA 90 bp CCTCGCACCCGGCCTTCCTTGCCCTTCAACCGCTGCTTCAGGGACTaGAGGGGACGCCCAGACTTCTGCATGGCACGGGGCAAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: PRTRPSLPFNRCFRD*RGRPDFCMARGKPG
Trigger: GCCTGGCTTGCCCCGTGCCATGCAGAAGTCTGGGCGTCCCCTCAAGTCCCTGAAGCAGCGGTTGAAGGGCAAGGAAGGCCGGGTGCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 72 bp CAGGCCGCACGGAGAGCGGGGGCACAGGCAGCACTGTaGCAATCATCCACTCTGGCCGTGCATAGCGGGGCT +
Preference number: 6 (lower is better)
Translates to: QAARRAGAQAAL*QSSTLAVHSGA
Trigger: AGCCCCGCTATGCACGGCCAGAGTGGATGATTGTCACAGTGCTGCCTGTGCCCCCGCTCTCCGTGCGGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp CCTCACTACAAAAAGCCTGCGCCGCCTCCGCCTAGGTaGTCAGACCTCGTCAGGGCGGCCACCGGGAAGGAC +
Preference number: 6 (lower is better)
Translates to: PHYKKPAPPPPR*SDLVRAATGKD
Trigger: GTCCTTCCCGGTGGCCGCCCTGACGAGGTCTGAGCACCTAGGCGGAGGCGGCGCAGGCTTTTTGTAGTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp CCAGTCGAAGGCCTCCCCACTGAGCCGAAACTCCTCTaGCATGCGGCGGGAACACAACGTGGACCGCAGGTG +
Preference number: 6 (lower is better)
Translates to: PVEGLPTEPKLL*HAAGTQRGPQV
Trigger: CACCTGCGGTCCACGTTGTGTTCCCGCCGCATGGCAGAGGAGTTTCGGCTCAGTGGGGAGGCCTTCGACTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000574158.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp CGGCCTTCCTTGCCCTTCAACCGCTGCTTCAGGGACTaGAGGGGACGCCCAGACTTCTGCATGGCACGGGGC +
Preference number: 6 (lower is better)
Translates to: RPSLPFNRCFRD*RGRPDFCMARG
Trigger: GCCCCGTGCCATGCAGAAGTCTGGGCGTCCCCTCAAGTCCCTGAAGCAGCGGTTGAAGGGCAAGGAAGGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 72 bp GTTCATCCGGACTCAGGACTCCGAACTGGACTCTCTTaGTGGTGCGCAGCGGGCATGCGCTGTCCCCCGAGG +
Preference number: 6 (lower is better)
Translates to: VHPDSGLRTGLS*WCAAGMRCPPR
Trigger: CCTCGGGGGACAGCGCATGCCCGCTGCGCACCATCAAGAGAGTCCAGTTCGGAGTCCTGAGTCCGGATGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 72 bp GGCCTTCCTTGCCCTTCAACCGCTGCTTCAGGGACTTaGGGGGACGCCCAGACTTCTGCATGGCACGGGGCA +
Preference number: 6 (lower is better)
Translates to: GLPCPSTAASGT*GDAQTSAWHGA
Trigger: TGCCCCGTGCCATGCAGAAGTCTGGGCGTCCCCTCAAGTCCCTGAAGCAGCGGTTGAAGGGCAAGGAAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 72 bp GGCCGTCTTCGCCGTAGCGCAGCTGCACCACCTGGTTaGTGGAGTTCCGCACAGTCGCGTCGTACTTCACCA +
Preference number: 6 (lower is better)
Translates to: GRLRRSAAAPPG*WSSAQSRRTSP
Trigger: TGGTGAAGTACGACGCGACTGTGCGGAACTCCATCAACCAGGTGGTGCAGCTGCGCTACGGCGAAGACGGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000576114.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 72 bp CAATCTCCCCAAGCAGCCAGTCGAAGGCCTCCCCACTaGGCCGAAACTCCTCTGCCATGCGGCGGGAACACA +
Preference number: 6 (lower is better)
Translates to: QSPQAASRRPPH*AETPLPCGGNT
Trigger: TGTGTTCCCGCCGCATGGCAGAGGAGTTTCGGCTCAGTGGGGAGGCCTTCGACTGGCTGCTTGGGGAGATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000574158.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 72 bp AGCAGCCAGTGCCGGCCGGAGCCAGCTGGCCCAGCATaGTATTCTCAGAGACCCCCTTCATGGGGTCACTCT +
Preference number: 6 (lower is better)
Translates to: SSQCRPEPAGPA*YSQRPPSWGHS
Trigger: AGAGTGACCCCATGAAGGGGGTCTCTGAGAATATCATGCTGGGCCAGCTGGCTCCGGCCGGCACTGGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000576553.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp CCCAACACTGGGGGACCAGGCGCCATAGGCAGGGGTTaGACCCTGGTTCCAAGGTGTCATGGCAGGAGAGAT +
Preference number: 6 (lower is better)
Translates to: PNTGGPGAIGRG*TLVPRCHGRRD
Trigger: ATCTCTCCTGCCATGACACCTTGGAACCAGGGTGCAACCCCTGCCTATGGCGCCTGGTCCCCCAGTGTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp CGGGGGCACAGGCAGCACTGTGACAATCATCCACTCTaGCCGTGCATAGCGGGGCTCCATGCCCAGCACAAA +
Preference number: 6 (lower is better)
Translates to: RGHRQHCDNHPL*PCIAGLHAQHK
Trigger: TTTGTGCTGGGCATGGAGCCCCGCTATGCACGGCCAGAGTGGATGATTGTCACAGTGCTGCCTGTGCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp AGTTCATCCGGACTCAGGACTCCGAACTGGACTCTCTaGATGGTGCGCAGCGGGCATGCGCTGTCCCCCGAG +
Preference number: 6 (lower is better)
Translates to: SSSGLRTPNWTL*MVRSGHALSPE
Trigger: CTCGGGGGACAGCGCATGCCCGCTGCGCACCATCAAGAGAGTCCAGTTCGGAGTCCTGAGTCCGGATGAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp GGACGCCCAGACTTCTGCATGGCACGGGGCAAGCCAGGCAGCTCATaGTCCACCATGGTGGCCACATGGAACTGGAGGAGCTTCACATCC +
Preference number: 6 (lower is better)
Translates to: GRPDFCMARGKPGSS*STMVATWNWRSFTS
Trigger: GGATGTGAAGCTCCTCCAGTTCCATGTGGCCACCATGGTGGACAATGAGCTGCCTGGCTTGCCCCGTGCCATGCAGAAGTCTGGGCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp AAGTCCACTCTTTTGCCCATCAGGTTCCCTCGCACCCGGCCTTCCTaGCCCTTCAACCGCTGCTTCAGGGACTTGAGGGGACGCCCAGAC +
Preference number: 6 (lower is better)
Translates to: KSTLLPIRFPRTRPS*PFNRCFRDLRGRPD
Trigger: GTCTGGGCGTCCCCTCAAGTCCCTGAAGCAGCGGTTGAAGGGCAAGGAAGGCCGGGTGCGAGGGAACCTGATGGGCAAAAGAGTGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 72 bp TGCGGCGGGAACACAACGTGGACCGCAGGTGGATGTTaGAGAGCAGCGTGGCATTTTCCTGGGCCTGTCGAC +
Preference number: 6 (lower is better)
Translates to: CGGNTTWTAGGC*RAAWHFPGPVD
Trigger: GTCGACAGGCCCAGGAAAATGCCACGCTGCTCTTCAACATCCACCTGCGGTCCACGTTGTGTTCCCGCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000574158.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 72 bp CATGGCAGGAGAGATTCCACCCATGGGACTGGGTGCTaGACCAAAGAACATGCCGGTGGGTCCAGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: HGRRDSTHGTGC*TKEHAGGSSSP
Trigger: GGGGCTGCTGGACCCACCGGCATGTTCTTTGGTTCAGCACCCAGTCCCATGGGTGGAATCTCTCCTGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp GCACTGTTCCTCCACGGATCCCTCTTCCCTGCCATATaGAAGCTGCCCCGGGTTTATACCACCCCCACCCTG +
Preference number: 6 (lower is better)
Translates to: ALFLHGSLFPAI*KLPRVYTTPTL
Trigger: CAGGGTGGGGGTGGTATAAACCCGGGGCAGCTTGCATATGGCAGGGAAGAGGGATCCGTGGAGGAACAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576952.1
CDS GCA 72 bp GCAATCTGCTCCATGGTGAGCTTCCGGTCAGTCATGTaGTTCCGATCCAGCTCCACCCGCAACAGCCAGGGG +
Preference number: 6 (lower is better)
Translates to: AICSMVSFRSVM*FRSSSTRNSQG
Trigger: CCCCTGGCTGTTGCGGGTGGAGCTGGATCGGAAGCACATGACTGACCGGAAGCTCACCATGGAGCAGATTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000573603.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp GCATACAGCTCTAGGCCAGAACGCCGGATCCTGGGCTaGTACCGCCCACAGCCACCATGGCCCTTTTCTTTG +
Preference number: 6 (lower is better)
Translates to: AYSSRPERRILG*YRPQPPWPFSL
Trigger: CAAAGAAAAGGGCCATGGTGGCTGTGGGCGGTACCAGCCCAGGATCCGGCGTTCTGGCCTAGAGCTGTATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp ATTCCGCATACAGCTCTAGGCCAGAACGCCGGATCCTaGGCTGGTACCGCCCACAGCCACCATGGCCCTTTT +
Preference number: 6 (lower is better)
Translates to: IPHTALGQNAGS*AGTAHSHHGPF
Trigger: AAAAGGGCCATGGTGGCTGTGGGCGGTACCAGCCCAGGATCCGGCGTTCTGGCCTAGAGCTGTATGCGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp TGGAACTGGAGGAGCTTCACATCCTCTGCAATGACATaGGCCGCTGCGCCGTTCTGCTCATTGCGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: WNWRSFTSSAMT*AAAPFCSLRRS
Trigger: GCTGCGGCGCAATGAGCAGAACGGCGCAGCGGCCCATGTCATTGCAGAGGATGTGAAGCTCCTCCAGTTCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp GGGGTGACAATCATGCGAGGAACCATGGCCAGCTCCTaGATCTCTGCTCGCGTCTCCAGAGACTGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: GVTIMRGTMASS*ISARVSRDCGR
Trigger: CCTGCCACAGTCTCTGGAGACGCGAGCAGAGATCCAGGAGCTGGCCATGGTTCCTCGCATGATTGTCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000575547.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp TCTGCCATGCGGCGGGAACACAACGTGGACCGCAGGTaGATGTTGAAGAGCAGCGTGGCATTTTCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: SAMRREHNVDRR*MLKSSVAFSWA
Trigger: GGCCCAGGAAAATGCCACGCTGCTCTTCAACATCCACCTGCGGTCCACGTTGTGTTCCCGCCGCATGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000574158.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp AGGAGGTCAAAGCAGCCAGTGCCGGCCGGAGCCAGCTaGCCCAGCATGATATTCTCAGAGACCCCCTTCATG +
Preference number: 6 (lower is better)
Translates to: RRSKQPVPAGAS*PSMIFSETPFM
Trigger: CATGAAGGGGGTCTCTGAGAATATCATGCTGGGCCAGCTGGCTCCGGCCGGCACTGGCTGCTTTGACCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000576553.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp CAGGTTACAGGGGAGGACGACCTTGCTGTCTCCAGTTaGGAAGATGACCCTGAGCACCTCCCGATCCTCCCG +
Preference number: 6 (lower is better)
Translates to: QVTGEDDLAVSS*EDDPEHLPILP
Trigger: CGGGAGGATCGGGAGGTGCTCAGGGTCATCTTCCCAACTGGAGACAGCAAGGTCGTCCTCCCCTGTAACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000576718.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp CGGTGGGTCCAGCAGCCCCCAGGCCGGGGATATTGGTaGGGATCTCCATGCCATACTTGCACTTCTCTGCAT +
Preference number: 6 (lower is better)
Translates to: RWVQQPPGRGYW*GSPCHTCTSLH
Trigger: ATGCAGAGAAGTGCAAGTATGGCATGGAGATCCCCACCAATATCCCCGGCCTGGGGGCTGCTGGACCCACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp GACTTCTGCATGGCACGGGGCAAGCCAGGCAGCTCATaGTCCACCATGGTGGCCACATGGAACTGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: DFCMARGKPGSS*STMVATWNWRS
Trigger: GCTCCTCCAGTTCCATGTGGCCACCATGGTGGACAATGAGCTGCCTGGCTTGCCCCGTGCCATGCAGAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp GGGGTGATGACAGTACGGGCCGAGAAGTCCACTCTTTaGCCCATCAGGTTCCCTCGCACCCGGCCTTCCTTG +
Preference number: 6 (lower is better)
Translates to: GVMTVRAEKSTL*PIRFPRTRPSL
Trigger: CAAGGAAGGCCGGGTGCGAGGGAACCTGATGGGCAAAAGAGTGGACTTCTCGGCCCGTACTGTCATCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp GTAACCGGGTTCCTGAACGGCAGAGGTTACGGCAGTTaGTCTCTCCCCCTTCCGGGAGCCGCCTTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: VTGFLNGRGYGS*SLPLPGAAFFS
Trigger: GGAGAAGAAGGCGGCTCCCGGAAGGGGGAGAGACAAACTGCCGTAACCTCTGCCGTTCAGGAACCCGGTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp TCCTCTGCCATGCGGCGGGAACACAACGTGGACCGCAGGTGGATGTaGAAGAGCAGCGTGGCATTTTCCTGGGCCTGTCGACTTAGTGGG +
Preference number: 6 (lower is better)
Translates to: SSAMRREHNVDRRWM*KSSVAFSWACRLSG
Trigger: CCCACTAAGTCGACAGGCCCAGGAAAATGCCACGCTGCTCTTCAACATCCACCTGCGGTCCACGTTGTGTTCCCGCCGCATGGCAGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000574158.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp TCATTCCACTCCCAACACTGGGGGACCAGGCGCCATAGGCAGGGGTaGCACCCTGGTTCCAAGGTGTCATGGCAGGAGAGATTCCACCCA +
Preference number: 6 (lower is better)
Translates to: SFHSQHWGTRRHRQG*HPGSKVSWQERFHP
Trigger: TGGGTGGAATCTCTCCTGCCATGACACCTTGGAACCAGGGTGCAACCCCTGCCTATGGCGCCTGGTCCCCCAGTGTTGGGAGTGGAATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 72 bp TATGCAAGCTGCCCCGGGTTTATACCACCCCCACCCTaGATGCCAGAGACCAACAGCTCCCTGCACACCTGG +
Preference number: 6 (lower is better)
Translates to: YASCPGFIPPPP*MPETNSSLHTW
Trigger: CCAGGTGTGCAGGGAGCTGTTGGTCTCTGGCATTCAGGGTGGGGGTGGTATAAACCCGGGGCAGCTTGCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576952.1
CDS TCA 72 bp CCACATGGAACTGGAGGAGCTTCACATCCTCTGCAATaGCATGGGCCGCTGCGCCGTTCTGCTCATTGCGCC +
Preference number: 6 (lower is better)
Translates to: PHGTGGASHPLQ*HGPLRRSAHCA
Trigger: GGCGCAATGAGCAGAACGGCGCAGCGGCCCATGTCATTGCAGAGGATGTGAAGCTCCTCCAGTTCCATGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp GCCTTCTGCACTGTTCCTCCACGGATCCCTCTTCCCTaGCATATGCAAGCTGCCCCGGGTTTATACCACCCC +
Preference number: 6 (lower is better)
Translates to: AFCTVPPRIPLP*HMQAAPGLYHP
Trigger: GGGGTGGTATAAACCCGGGGCAGCTTGCATATGGCAGGGAAGAGGGATCCGTGGAGGAACAGTGCAGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576952.1
CDS GCA 72 bp CTCAGAGACCCCCTTCATGGGGTCACTCTCACCGTGTaGGGCTGCTTCCATAAGCACGTCCACCGTTTCCTC +
Preference number: 6 (lower is better)
Translates to: LRDPLHGVTLTV*GCFHKHVHRFL
Trigger: GAGGAAACGGTGGACGTGCTTATGGAAGCAGCCGCACACGGTGAGAGTGACCCCATGAAGGGGGTCTCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000576553.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp TGGCACGGGGCAAGCCAGGCAGCTCATTGTCCACCATaGTGGCCACATGGAACTGGAGGAGCTTCACATCCT +
Preference number: 6 (lower is better)
Translates to: WHGASQAAHCPP*WPHGTGGASHP
Trigger: AGGATGTGAAGCTCCTCCAGTTCCATGTGGCCACCATGGTGGACAATGAGCTGCCTGGCTTGCCCCGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp GGTCCTCCTGCAGAGTGCGCCGCAGGGCCCTCTCATTaGTATAATCAAAGCGGAACCTGGAAGTGCAAGGGG +
Preference number: 6 (lower is better)
Translates to: GPPAECAAGPSH*YNQSGTWKCKG
Trigger: CCCCTTGCACTTCCAGGTTCCGCTTTGATTATACCAATGAGAGGGCCCTGCGGCGCACTCTGCAGGAGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576718.1
CDS CAA 72 bp ATGCGGCGGGAACACAACGTGGACCGCAGGTGGATGTaGAAGAGCAGCGTGGCATTTTCCTGGGCCTGTCGA +
Preference number: 6 (lower is better)
Translates to: MRREHNVDRRWM*KSSVAFSWACR
Trigger: TCGACAGGCCCAGGAAAATGCCACGCTGCTCTTCAACATCCACCTGCGGTCCACGTTGTGTTCCCGCCGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000574158.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp CGCACGGCTTCAATGCCCAGCACCGTGAAGATCTCCACAATGTCATaGGACGTGGTGCGTACGGGGTCCACGTCCTTCTCACTCAGCACC +
Preference number: 6 (lower is better)
Translates to: RTASMPSTVKISTMS*DVVRTGSTSFSLST
Trigger: GGTGCTGAGTGAGAAGGACGTGGACCCCGTACGCACCACGTCCAATGACATTGTGGAGATCTTCACGGTGCTGGGCATTGAAGCCGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000576553.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 72 bp CCTGCCCTATCTTGGAAAGCTTTCTGCTCAGGTGGCTaGGAGAGGCCCTGGCCTGCTACGTGCCTTATAGCC +
Preference number: 6 (lower is better)
Translates to: PALSWKAFCSGG*ERPWPATCLIA
Trigger: GGCTATAAGGCACGTAGCAGGCCAGGGCCTCTCTCAGCCACCTGAGCAGAAAGCTTTCCAAGATAGGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576952.1
CDS TCA 72 bp GCTTGGGGCGGCCTCCCTCAGTCGTCTCTGGGTATTTaGTGCCACCCTCCGTCACAGACATTCGCTTCAGTT +
Preference number: 6 (lower is better)
Translates to: AWGGLPQSSLGI*CHPPSQTFASV
Trigger: AACTGAAGCGAATGTCTGTGACGGAGGGTGGCATCAAATACCCAGAGACGACTGAGGGAGGCCGCCCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp GAGGAGCTTCACATCCTCTGCAATGACATGGGCCGCTaGGCCGTTCTGCTCATTGCGCCGCAGCTGATTGTT +
Preference number: 6 (lower is better)
Translates to: EELHILCNDMGR*AVLLIAPQLIV
Trigger: AACAATCAGCTGCGGCGCAATGAGCAGAACGGCGCAGCGGCCCATGTCATTGCAGAGGATGTGAAGCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp GGTGGCCACATGGAACTGGAGGAGCTTCACATCCTCTaGAATGACATGGGCCGCTGCGCCGTTCTGCTCATT +
Preference number: 6 (lower is better)
Translates to: GGHMELEELHIL*NDMGRCAVLLI
Trigger: AATGAGCAGAACGGCGCAGCGGCCCATGTCATTGCAGAGGATGTGAAGCTCCTCCAGTTCCATGTGGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp GACCCCCTTCATGGGGTCACTCTCACCGTGTGCGGCTaGTTCCATAAGCACGTCCACCGTTTCCTCAAAGGA +
Preference number: 6 (lower is better)
Translates to: DPLHGVTLTVCG*FHKHVHRFLKG
Trigger: TCCTTTGAGGAAACGGTGGACGTGCTTATGGAAGCAGCCGCACACGGTGAGAGTGACCCCATGAAGGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000576553.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp CCGCTCAAATTCCCGCTCCAACTCGTTCTGGATGTGTaGGTTGCTCAGCACGTCCTTCACCAGGTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: PLKFPLQLVLDV*VAQHVLHQVLL
Trigger: CAGGAGGACCTGGTGAAGGACGTGCTGAGCAACGCACACATCCAGAACGAGTTGGAGCGGGAATTTGAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000576718.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp ATCAAGCTCACGCCGTCCGTCTCCAGGATCCACTCCTaGAGGGCCTTGAATTCCCCATCCTCCGTGATGATG +
Preference number: 6 (lower is better)
Translates to: IKLTPSVSRIHS*RALNSPSSVMM
Trigger: CATCATCACGGAGGATGGGGAATTCAAGGCCCTGCAGGAGTGGATCCTGGAGACGGACGGCGTGAGCTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp ATTCGCTTCAGTTCATCCGGACTCAGGACTCCGAACTaGACTCTCTTGATGGTGCGCAGCGGGCATGCGCTG +
Preference number: 6 (lower is better)
Translates to: IRFSSSGLRTPN*TLLMVRSGHAL
Trigger: CAGCGCATGCCCGCTGCGCACCATCAAGAGAGTCCAGTTCGGAGTCCTGAGTCCGGATGAACTGAAGCGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp GTGTCCTGCACAATACCCATGACAGGCCGATTGCTCTaGGGGGTGACAATCATGCGAGGAACCATGGCCAGC +
Preference number: 6 (lower is better)
Translates to: VSCTIPMTGRLL*GVTIMRGTMAS
Trigger: GCTGGCCATGGTTCCTCGCATGATTGTCACCCCCCAGAGCAATCGGCCTGTCATGGGTATTGTGCAGGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000575547.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp TGGCGGTTGACTCCGTGTCGGGTGATGGCCATCAAGTaGCCACGACAGGTCATGGTATCACACAAGAGAGCC +
Preference number: 6 (lower is better)
Translates to: WRLTPCRVMAIK*PRQVMVSHKRA
Trigger: GGCTCTCTTGTGTGATACCATGACCTGTCGTGGCCACTTGATGGCCATCACCCGACACGGAGTCAACCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000576553.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp ACTCACGTCCAGCAGCCCCCAGGCCGGGGATATTGGTaGGGATCTCCATGCCATACTTGCACTTCTCTGCAT +
Preference number: 6 (lower is better)
Translates to: THVQQPPGRGYW*GSPCHTCTSLH
Trigger: ATGCAGAGAAGTGCAAGTATGGCATGGAGATCCCCACCAATATCCCCGGCCTGGGGGCTGCTGGACGTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576553.1
CDS CCA 72 bp TCCCGCATCCGCTCAAATTCCCGCTCCAACTCGTTCTaGATGTGTGCGTTGCTCAGCACGTCCTTCACCAGG +
Preference number: 6 (lower is better)
Translates to: SRIRSNSRSNSF*MCALLSTSFTR
Trigger: CCTGGTGAAGGACGTGCTGAGCAACGCACACATCCAGAACGAGTTGGAGCGGGAATTTGAGCGGATGCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000576718.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp AGCTTGGGGCGGCCTCCCTCAGTCGTCTCTGGGTATTaGATGCCACCCTCCGTCACAGACATTCGCTTCAGT +
Preference number: 6 (lower is better)
Translates to: SLGRPPSVVSGY*MPPSVTDIRFS
Trigger: ACTGAAGCGAATGTCTGTGACGGAGGGTGGCATCAAATACCCAGAGACGACTGAGGGAGGCCGCCCCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp CCAGAGCCCCACTGCCCACTTAAGCCAGGTTTCCATTaGGACCACACACCCGCTCCAGGAAGACGTCTCTCT +
Preference number: 6 (lower is better)
Translates to: PEPHCPLKPGFH*DHTPAPGRRLS
Trigger: AGAGAGACGTCTTCCTGGAGCGGGTGTGTGGTCCAAATGGAAACCTGGCTTAAGTGGGCAGTGGGGCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572844.1
CDS CAA 90 bp AGGTCACTGGGCTTGGGGTGGAAACGCAAGTCAATGCGATCACCATaGTCTCGGATGATGTACTTGGCGCCTGGGTACTGGCTGTTCCCC +
Preference number: 6 (lower is better)
Translates to: RSLGLGWKRKSMRSP*SRMMYLAPGYWLFP
Trigger: GGGGAACAGCCAGTACCCAGGCGCCAAGTACATCATCCGAGACAATGGTGATCGCATTGACTTGCGTTTCCACCCCAAGCCCAGTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000576952.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp AATGAACGAGACAGACTCAGATGGCCTAACCCAGCCTGCCCTATCTaGGAAAGCTTTCTGCTCAGGTGGCTGAGAGAGGCCCTGGCCTGC +
Preference number: 6 (lower is better)
Translates to: NERDRLRWPNPACPI*ESFLLRWLREALAC
Trigger: GCAGGCCAGGGCCTCTCTCAGCCACCTGAGCAGAAAGCTTTCCAAGATAGGGCAGGCTGGGTTAGGCCATCTGAGTCTGTCTCGTTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576952.1
CDS CAA 90 bp GCCACCATGGCCCTTTTCTTTGGTCAGATCCTCGTCACCCTCAGGTaGTTCCACACCGAACTTGTTGTCCATCTCCTCCCCACCCTCGCA +
Preference number: 6 (lower is better)
Translates to: ATMALFFGQILVTLR*FHTELVVHLLPTLA
Trigger: TGCGAGGGTGGGGAGGAGATGGACAACAAGTTCGGTGTGGAACAACCTGAGGGTGACGAGGATCTGACCAAAGAAAAGGGCCATGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp GTTTCCTCAAAGGAACACTTCATGAGTGGTCCTGTGTCCTGGCGGTaGACTCCGTGTCGGGTGATGGCCATCAAGTGGCCACGACAGGTC +
Preference number: 6 (lower is better)
Translates to: VSSKEHFMSGPVSWR*TPCRVMAIKWPRQV
Trigger: GACCTGTCGTGGCCACTTGATGGCCATCACCCGACACGGAGTCAACCGCCAGGACACAGGACCACTCATGAAGTGTTCCTTTGAGGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000576553.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp TCAAACGTCTGCCGCAGAGTGTTCCCTGGGGTGGGCTCCAGCTCATaGTTGTGTGCCTTCTCGATGACCTCTATTACGTCCTGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: SNVCRRVFPGVGSSS*LCAFSMTSITSCLA
Trigger: GGCCAAGCAGGACGTAATAGAGGTCATCGAGAAGGCACACAACAATGAGCTGGAGCCCACCCCAGGGAACACTCTGCGGCAGACGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp AATCATGCGAGGAACCATGGCCAGCTCCTGGATCTCTaGTCGCGTCTCCAGAGACTGTGGCAGGTGCAAGTT +
Preference number: 6 (lower is better)
Translates to: NHARNHGQLLDL*SRLQRLWQVQV
Trigger: AACTTGCACCTGCCACAGTCTCTGGAGACGCGAGCAGAGATCCAGGAGCTGGCCATGGTTCCTCGCATGATT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000575547.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp AAAGCCTTGTTGGAAGGCTTAAGCGTAGCCAGGTTCTaGAACTCAACGCTCTCGCCTGCCAGGCCGTCTTCG +
Preference number: 6 (lower is better)
Translates to: KALLEGLSVARF*NSTLSPARPSS
Trigger: CGAAGACGGCCTGGCAGGCGAGAGCGTTGAGTTCCAGAACCTGGCTACGCTTAAGCCTTCCAACAAGGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000576114.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp CAGCTCCTGGATCTCTGCTCGCGTCTCCAGAGACTGTaGCAGGTGCAAGTTCATCTCATCCCCGTCAAAGTC +
Preference number: 6 (lower is better)
Translates to: QLLDLCSRLQRL*QVQVHLIPVKV
Trigger: GACTTTGACGGGGATGAGATGAACTTGCACCTGCCACAGTCTCTGGAGACGCGAGCAGAGATCCAGGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000575547.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp CAGAGCCCCACTGCCCACTTAAGCCAGGTTTCCATTTaGACCACACACCCGCTCCAGGAAGACGTCTCTCTT +
Preference number: 6 (lower is better)
Translates to: QSPTAHLSQVSI*TTHPLQEDVSL
Trigger: AAGAGAGACGTCTTCCTGGAGCGGGTGTGTGGTCCAAATGGAAACCTGGCTTAAGTGGGCAGTGGGGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572844.1
CDS CCA 72 bp ATTCCTGATCCTCTGCCACCACCGTGCTCTGGGGGTTaGGGTCATAGTAGATGGCTGTGTTGGCAGTCACCT +
Preference number: 6 (lower is better)
Translates to: IPDPLPPPCSGG*GHSRWLCWQSP
Trigger: AGGTGACTGCCAACACAGCCATCTACTATGACCCCAACCCCCAGAGCACGGTGGTGGCAGAGGATCAGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000573603.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp GGTTCCAAGGTGTCATGGCAGGAGAGATTCCACCCATaGGACTGGGTGCTGAACCAAAGAACATGCCGGTGG +
Preference number: 6 (lower is better)
Translates to: GSKVSWQERFHP*DWVLNQRTCRW
Trigger: CCACCGGCATGTTCTTTGGTTCAGCACCCAGTCCCATGGGTGGAATCTCTCCTGCCATGACACCTTGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp CCCGCCTGCCCGCCTCCTCACTTCTTCTCAAAAGCCTaGTTGGAAGGCTTAAGCGTAGCCAGGTTCTGGAAC +
Preference number: 6 (lower is better)
Translates to: PACPPPHFFSKA*LEGLSVARFWN
Trigger: GTTCCAGAACCTGGCTACGCTTAAGCCTTCCAACAAGGCTTTTGAGAAGAAGTGAGGAGGCGGGCAGGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576114.1
CDS CAA 72 bp ATGTTGAAGGGGGTGACAATCTCCGCAAAGGTCATGTaGGCAGCAATGGAGCGGGGCACGCCAACCTGGTCA +
Preference number: 6 (lower is better)
Translates to: MLKGVTISAKVM*AAMERGTPTWS
Trigger: TGACCAGGTTGGCGTGCCCCGCTCCATTGCTGCCAACATGACCTTTGCGGAGATTGTCACCCCCTTCAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000576952.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp AAGGAACACTTCATGAGTGGTCCTGTGTCCTGGCGGTaGACTCCGTGTCGGGTGATGGCCATCAAGTGGCCA +
Preference number: 6 (lower is better)
Translates to: KEHFMSGPVSWR*TPCRVMAIKWP
Trigger: TGGCCACTTGATGGCCATCACCCGACACGGAGTCAACCGCCAGGACACAGGACCACTCATGAAGTGTTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000576553.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp GGCAGAGTCCGGTGCTTGAAGCCAAATGGAATCCGCTaGCCCTCGACGTTCTGCTGTCCAACGACAGCAATG +
Preference number: 6 (lower is better)
Translates to: GRVRCLKPNGIR*PSTFCCPTTAM
Trigger: CATTGCTGTCGTTGGACAGCAGAACGTCGAGGGCAAGCGGATTCCATTTGGCTTCAAGCACCGGACTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp ACCATTTCCCCGGGATGCGCAATGGCTTGGTTGAACTaGGACTCAATCTCCCCAAGCAGCCAGTCGAAGGCC +
Preference number: 6 (lower is better)
Translates to: TISPGCAMAWLN*DSISPSSQSKA
Trigger: GGCCTTCGACTGGCTGCTTGGGGAGATTGAGTCCAAGTTCAACCAAGCCATTGCGCATCCCGGGGAAATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp ACGCCGTCCGTCTCCAGGATCCACTCCTGCAGGGCCTaGAATTCCCCATCCTCCGTGATGATGATCTTCTTC +
Preference number: 6 (lower is better)
Translates to: TPSVSRIHSCRA*NSPSSVMMIFF
Trigger: GAAGAAGATCATCATCACGGAGGATGGGGAATTCAAGGCCCTGCAGGAGTGGATCCTGGAGACGGACGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp AGTCTGTCAATGTTGAAGGGGGTGACAATCTCCGCAAAGGTCATGTaGGCAGCAATGGAGCGGGGCACGCCAACCTGGTCAATGGAGAGG +
Preference number: 6 (lower is better)
Translates to: SLSMLKGVTISAKVM*AAMERGTPTWSMER
Trigger: CCTCTCCATTGACCAGGTTGGCGTGCCCCGCTCCATTGCTGCCAACATGACCTTTGCGGAGATTGTCACCCCCTTCAACATTGACAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000576952.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 72 bp TCGCGTCGTACTTCACCATCACTGACTCCATGGACTTaGTCAGCCGCCGCTGGATGTATCCAGTCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: SRRTSPSLTPWT*SAAAGCIQSQQ
Trigger: CTGCTGAGACTGGATACATCCAGCGGCGGCTGATCAAGTCCATGGAGTCAGTGATGGTGAAGTACGACGCGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000576114.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 72 bp GGAAACGCAAGTCAATGCGATCACCATTGTCTCGGATaGTGTACTTGGCGCCTGGGTACTGGCTGTTCCCCC +
Preference number: 6 (lower is better)
Translates to: GNASQCDHHCLG*CTWRLGTGCSP
Trigger: GGGGGAACAGCCAGTACCCAGGCGCCAAGTACATCATCCGAGACAATGGTGATCGCATTGACTTGCGTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000576952.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 72 bp GCGGGGCTCCATGCCCAGCACAAAACACTCCTCATCTaGGATGCGTTTGAAGATCTCATGCACTCGCTCTGG +
Preference number: 6 (lower is better)
Translates to: AGLHAQHKTLLI*DAFEDLMHSLW
Trigger: CCAGAGCGAGTGCATGAGATCTTCAAACGCATCTCAGATGAGGAGTGTTTTGTGCTGGGCATGGAGCCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp CAATCATCCACTCTGGCCGTGCATAGCGGGGCTCCATaGCCAGCACAAAACACTCCTCATCTGAGATGCGTT +
Preference number: 6 (lower is better)
Translates to: QSSTLAVHSGAP*PAQNTPHLRCV
Trigger: AACGCATCTCAGATGAGGAGTGTTTTGTGCTGGGCATGGAGCCCCGCTATGCACGGCCAGAGTGGATGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp ATTGGTGGGGATCTCCATGCCATACTTGCACTTCTCTaGATCAAGCAGGAGGTCAAAGCAGCCAGTGCCGGC +
Preference number: 6 (lower is better)
Translates to: IGGDLHAILALL*IKQEVKAASAG
Trigger: GCCGGCACTGGCTGCTTTGACCTCCTGCTTGATGCAGAGAAGTGCAAGTATGGCATGGAGATCCCCACCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000576553.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp CGCAGGTGGATGTTGAAGAGCAGCGTGGCATTTTCCTaGGCCTGTCGACTTAGTGGGTCATCCCCATTCACA +
Preference number: 6 (lower is better)
Translates to: RRWMLKSSVAFS*ACRLSGSSPFT
Trigger: TGTGAATGGGGATGACCCACTAAGTCGACAGGCCCAGGAAAATGCCACGCTGCTCTTCAACATCCACCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000574158.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp TCCTCAAAGGAACACTTCATGAGTGGTCCTGTGTCCTaGCGGTTGACTCCGTGTCGGGTGATGGCCATCAAG +
Preference number: 6 (lower is better)
Translates to: SSKEHFMSGPVS*RLTPCRVMAIK
Trigger: CTTGATGGCCATCACCCGACACGGAGTCAACCGCCAGGACACAGGACCACTCATGAAGTGTTCCTTTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000576553.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp AACACAGGAAATCGTGAGGAGCAAGAACAGCAATCATaGACTGGTGACACCCTTGCACCCATGGCCTGCCCC +
Preference number: 6 (lower is better)
Translates to: NTGNREEQEQQS*TGDTLAPMACP
Trigger: GGGGCAGGCCATGGGTGCAAGGGTGTCACCAGTCCATGATTGCTGTTCTTGCTCCTCACGATTTCCTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576553.1
CDS CCA 72 bp CCACCACCGTGCTCTGGGGGTTGGGGTCATAGTAGATaGCTGTGTTGGCAGTCACCTTCCTCAACGTTGTAT +
Preference number: 6 (lower is better)
Translates to: PPPCSGGWGHSR*LCWQSPSSTLY
Trigger: ATACAACGTTGAGGAAGGTGACTGCCAACACAGCCATCTACTATGACCCCAACCCCCAGAGCACGGTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000573603.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp GATGAAGTGAGGCAGAGTCCGGTGCTTGAAGCCAAATaGAATCCGCTTGCCCTCGACGTTCTGCTGTCCAAC +
Preference number: 6 (lower is better)
Translates to: DEVRQSPVLEAK*NPLALDVLLSN
Trigger: GTTGGACAGCAGAACGTCGAGGGCAAGCGGATTCCATTTGGCTTCAAGCACCGGACTCTGCCTCACTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp GGGTATAGGTTGGAGACTGTGGTGTGTATCGTGGGCTaGAAGGGGAGTAACTTGGTGAGGTCGGGGAATAGC +
Preference number: 6 (lower is better)
Translates to: GYRLETVVCIVG*KGSNLVRSGNS
Trigger: GCTATTCCCCGACCTCACCAAGTTACTCCCCTTCCAGCCCACGATACACACCACAGTCTCCAACCTATACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp GTCGCGTCGTACTTCACCATCACTGACTCCATGGACTaGATCAGCCGCCGCTGGATGTATCCAGTCTCAGCA +
Preference number: 6 (lower is better)
Translates to: VASYFTITDSMD*ISRRWMYPVSA
Trigger: TGCTGAGACTGGATACATCCAGCGGCGGCTGATCAAGTCCATGGAGTCAGTGATGGTGAAGTACGACGCGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000576114.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp AAGTCAATGCGATCACCATTGTCTCGGATGATGTACTaGGCGCCTGGGTACTGGCTGTTCCCCCTGCGCACT +
Preference number: 6 (lower is better)
Translates to: KSMRSPLSRMMY*APGYWLFPLRT
Trigger: AGTGCGCAGGGGGAACAGCCAGTACCCAGGCGCCAAGTACATCATCCGAGACAATGGTGATCGCATTGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000576952.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp GGCTTGGGGTGGAAACGCAAGTCAATGCGATCACCATaGTCTCGGATGATGTACTTGGCGCCTGGGTACTGG +
Preference number: 6 (lower is better)
Translates to: GLGWKRKSMRSP*SRMMYLAPGYW
Trigger: CCAGTACCCAGGCGCCAAGTACATCATCCGAGACAATGGTGATCGCATTGACTTGCGTTTCCACCCCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000576952.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp CACACCCGCTCCAGGAAGACGTCTCTCTTGGTGAATTaGCGCACTGCTGTGAGTGTGTCCTGCACAATACCC +
Preference number: 6 (lower is better)
Translates to: HTRSRKTSLLVN*RTAVSVSCTIP
Trigger: GGGTATTGTGCAGGACACACTCACAGCAGTGCGCAAATTCACCAAGAGAGACGTCTTCCTGGAGCGGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572844.1
CDS CAA 72 bp TCAATGCCCAGCACCGTGAAGATCTCCACAATGTCATaGGACGTGGTGCGTACGGGGTCCACGTCCTTCTCA +
Preference number: 6 (lower is better)
Translates to: SMPSTVKISTMS*DVVRTGSTSFS
Trigger: TGAGAAGGACGTGGACCCCGTACGCACCACGTCCAATGACATTGTGGAGATCTTCACGGTGCTGGGCATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000576553.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp TCACCCCGCTCCAGGAAGACGTCTCTCTTGGTGAATTaGCGCACTGCTGTGAGTGTGTCCTGCACAATACCC +
Preference number: 6 (lower is better)
Translates to: SPRSRKTSLLVN*RTAVSVSCTIP
Trigger: GGGTATTGTGCAGGACACACTCACAGCAGTGCGCAAATTCACCAAGAGAGACGTCTTCCTGGAGCGGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000575547.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp TTCCGCACAGTCGCGTCGTACTTCACCATCACTGACTCCATGGACTaGATCAGCCGCCGCTGGATGTATCCAGTCTCAGCAGTCTTGACA +
Preference number: 6 (lower is better)
Translates to: FRTVASYFTITDSMD*ISRRWMYPVSAVLT
Trigger: TGTCAAGACTGCTGAGACTGGATACATCCAGCGGCGGCTGATCAAGTCCATGGAGTCAGTGATGGTGAAGTACGACGCGACTGTGCGGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000576114.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 72 bp CTGCGCCGTTCTGCTCATTGCGCCGCAGCTGATTGTTaGTCTTCACGATGTCAGCCAGTTTGTGAGTCAGGT +
Preference number: 6 (lower is better)
Translates to: LRRSAHCAAADC*SSRCQPVCESG
Trigger: ACCTGACTCACAAACTGGCTGACATCGTGAAGATCAACAATCAGCTGCGGCGCAATGAGCAGAACGGCGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 72 bp TCGGAGGGAAGGCGTGGGTTGATGTGGAAGATTTTCTaGGCATTCCAGATCATCCGCAGCAGGTTACAGGGG +
Preference number: 6 (lower is better)
Translates to: SEGRRGLMWKIF*AFQIIRSRLQG
Trigger: CCCCTGTAACCTGCTGCGGATGATCTGGAATGCTCAGAAAATCTTCCACATCAACCCACGCCTTCCCTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000576718.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 72 bp GTCTTGTCTCGGGCATCGTTAAGAATGCGGTTCACCTaGTTCTCAAACGTCTGCCGCAGAGTGTTCCCTGGG +
Preference number: 6 (lower is better)
Translates to: VLSRASLRMRFT*FSNVCRRVFPG
Trigger: CCCAGGGAACACTCTGCGGCAGACGTTTGAGAATCAGGTGAACCGCATTCTTAACGATGCCCGAGACAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp AAGCGAAAGGTAGACCATGGGAGAATGCGGACCCGATaGCCCATCATGGACATTTTGTGCAGAGTTGGCTGC +
Preference number: 6 (lower is better)
Translates to: KRKVDHGRMRTR*PIMDILCRVGC
Trigger: GCAGCCAACTCTGCACAAAATGTCCATGATGGGGCATCGGGTCCGCATTCTCCCATGGTCTACCTTTCGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000575547.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp TGGATCTCTGCTCGCGTCTCCAGAGACTGTGGCAGGTaGAAGTTCATCTCATCCCCGTCAAAGTCTGCATTG +
Preference number: 6 (lower is better)
Translates to: WISARVSRDCGR*KFISSPSKSAL
Trigger: CAATGCAGACTTTGACGGGGATGAGATGAACTTGCACCTGCCACAGTCTCTGGAGACGCGAGCAGAGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000575547.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp CCTTATAGCCGGTCTGCAGGTGAAGGTCACTGGGCTTaGGGTGGAAACGCAAGTCAATGCGATCACCATTGT +
Preference number: 6 (lower is better)
Translates to: PYSRSAGEGHWA*GGNASQCDHHC
Trigger: ACAATGGTGATCGCATTGACTTGCGTTTCCACCCCAAGCCCAGTGACCTTCACCTGCAGACCGGCTATAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000576952.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp TTGTCTTCACCAGGAAGCCCACGTGAAACACAGGCTTaGCCAGTTCAATGTGGCCAAAGTGGCCAGGACACT +
Preference number: 6 (lower is better)
Translates to: LSSPGSPRETQA*PVQCGQSGQDT
Trigger: AGTGTCCTGGCCACTTTGGCCACATTGAACTGGCCAAGCCTGTGTTTCACGTGGGCTTCCTGGTGAAGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp TGCTCTGGGGGTTGGGGTCATAGTAGATGGCTGTGTTaGCAGTCACCTTCCTCAACGTTGTATGCTCCAGAC +
Preference number: 6 (lower is better)
Translates to: CSGGWGHSRWLC*QSPSSTLYAPD
Trigger: GTCTGGAGCATACAACGTTGAGGAAGGTGACTGCCAACACAGCCATCTACTATGACCCCAACCCCCAGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000573603.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp GCTCGATGCCCTGCAGGGTCATATCTGTCAGCATGTTaGACTCGATGCAGCGCAGGAAGACATCATCATCCA +
Preference number: 6 (lower is better)
Translates to: ARCPAGSYLSAC*TRCSAGRHHHP
Trigger: TGGATGATGATGTCTTCCTGCGCTGCATCGAGTCCAACATGCTGACAGATATGACCCTGCAGGGCATCGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp AGGCCGGGGATATTGGTGGGGATCTCCATGCCATACTaGCACTTCTCTGCATCAAGCAGGAGGTCAAAGCAG +
Preference number: 6 (lower is better)
Translates to: RPGILVGISMPY*HFSASSRRSKQ
Trigger: CTGCTTTGACCTCCTGCTTGATGCAGAGAAGTGCAAGTATGGCATGGAGATCCCCACCAATATCCCCGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000576553.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp TGCTCGATGCCCTGCAGGGTCATATCTGTCAGCATGTaGGACTCGATGCAGCGCAGGAAGACATCATCATCC +
Preference number: 6 (lower is better)
Translates to: CSMPCRVISVSM*DSMQRRKTSSS
Trigger: GGATGATGATGTCTTCCTGCGCTGCATCGAGTCCAACATGCTGACAGATATGACCCTGCAGGGCATCGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp CGGGGCTCCATGCCCAGCACAAAACACTCCTCATCTGAGATGCGTTaGAAGATCTCATGCACTCGCTCTGGACTCAGCAGGATCTTCTTC +
Preference number: 6 (lower is better)
Translates to: RGSMPSTKHSSSEMR*KISCTRSGLSRIFF
Trigger: GAAGAAGATCCTGCTGAGTCCAGAGCGAGTGCATGAGATCTTCAAACGCATCTCAGATGAGGAGTGTTTTGTGCTGGGCATGGAGCCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp AGGTTTCCATTTGGACCACACACCCGCTCCAGGAAGACGTCTCTCTaGGTGAATTTGCGCACTGCTGTGAGTGTGTCCTGCACAATACCC +
Preference number: 6 (lower is better)
Translates to: RFPFGPHTRSRKTSL*VNLRTAVSVSCTIP
Trigger: GGGTATTGTGCAGGACACACTCACAGCAGTGCGCAAATTCACCAAGAGAGACGTCTTCCTGGAGCGGGTGTGTGGTCCAAATGGAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572844.1
CDS CAA 90 bp AAGACTGCTGTGAAGAGCACAACACTCACAATGGCTTGGTTGAACTaGGACTCAATCTCCCCAAGCAGCCAGTCGAAGGCCTCCCCACTG +
Preference number: 6 (lower is better)
Translates to: KTAVKSTTLTMAWLN*DSISPSSQSKASPL
Trigger: CAGTGGGGAGGCCTTCGACTGGCTGCTTGGGGAGATTGAGTCCAAGTTCAACCAAGCCATTGTGAGTGTTGTGCTCTTCACAGCAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574158.1
CDS CAA 90 bp ATCAGGAGGTTCATCACTTCACCCCGCTCCAGGAAGACGTCTCTCTaGGTGAATTTGCGCACTGCTGTGAGTGTGTCCTGCACAATACCC +
Preference number: 6 (lower is better)
Translates to: IRRFITSPRSRKTSL*VNLRTAVSVSCTIP
Trigger: GGGTATTGTGCAGGACACACTCACAGCAGTGCGCAAATTCACCAAGAGAGACGTCTTCCTGGAGCGGGGTGAAGTGATGAACCTCCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000575547.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp ATCAAGCTCACGCCGTCCGTCTCCAGGATCCACTCCTGCAGGGCCTaGAATTCCCCATCCTCCGTGATGATGATCTTCTTCTTGTTGTCT +
Preference number: 6 (lower is better)
Translates to: IKLTPSVSRIHSCRA*NSPSSVMMIFFLLS
Trigger: AGACAACAAGAAGAAGATCATCATCACGGAGGATGGGGAATTCAAGGCCCTGCAGGAGTGGATCCTGGAGACGGACGGCGTGAGCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp AATGAACGAGACAGACTCAGATGGCCTAACCCAGCCTaGCCTATCTTGGAAAGCTTTCTGCTCAGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: NERDRLRWPNPA*PILESFLLRWL
Trigger: CAGCCACCTGAGCAGAAAGCTTTCCAAGATAGGGCAGGCTGGGTTAGGCCATCTGAGTCTGTCTCGTTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576952.1
CDS CCA 72 bp CACCACTTTGATGGGGTGCAGGTCGGAGGGAAGGCGTaGGTTGATGTGGAAGATTTTCTGAGCATTCCAGAT +
Preference number: 6 (lower is better)
Translates to: HHFDGVQVGGKA*VDVEDFLSIPD
Trigger: ATCTGGAATGCTCAGAAAATCTTCCACATCAACCCACGCCTTCCCTCCGACCTGCACCCCATCAAAGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000574158.1
ENST00000576718.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp TTGGTCAGATCCTCGTCACCCTCAGGTTGTTCCACACCGAACTTGTaGTCCATCTCCTCCCCACCCTCGCATATGTTTTTGCCCTTGCAA +
Preference number: 6 (lower is better)
Translates to: LVRSSSPSGCSTPNL*SISSPPSHMFLPLQ
Trigger: TTGCAAGGGCAAAAACATATGCGAGGGTGGGGAGGAGATGGACAACAAGTTCGGTGTGGAACAACCTGAGGGTGACGAGGATCTGACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp TCTTTGGTCAGATCCTCGTCACCCTCAGGTTGTTCCACACCGAACTaGTTGTCCATCTCCTCCCCACCCTCGCATATGTTTTTGCCCTTG +
Preference number: 6 (lower is better)
Translates to: SLVRSSSPSGCSTPN*LSISSPPSHMFLPL
Trigger: CAAGGGCAAAAACATATGCGAGGGTGGGGAGGAGATGGACAACAAGTTCGGTGTGGAACAACCTGAGGGTGACGAGGATCTGACCAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp GTAGACCATGGGAGAATGCGGACCCGATGCCCCATCATGGACATTTaGTGCAGAGTTGGCTGCCGGTTGAAGATAACAATGTCCCCATCA +
Preference number: 6 (lower is better)
Translates to: VDHGRMRTRCPIMDI*CRVGCRLKITMSPS
Trigger: TGATGGGGACATTGTTATCTTCAACCGGCAGCCAACTCTGCACAAAATGTCCATGATGGGGCATCGGGTCCGCATTCTCCCATGGTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000575547.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp TTGCTGATCTGCTCGATGCCCTGCAGGGTCATATCTGTCAGCATGTaGGACTCGATGCAGCGCAGGAAGACATCATCATCCATCTTGTCC +
Preference number: 6 (lower is better)
Translates to: LLICSMPCRVISVSM*DSMQRRKTSSSILS
Trigger: GGACAAGATGGATGATGATGTCTTCCTGCGCTGCATCGAGTCCAACATGCTGACAGATATGACCCTGCAGGGCATCGAGCAGATCAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp GAAAAGAAGACTGCTGTGAAGAGCACAACACTCACAATGGCTTGGTaGAACTTGGACTCAATCTCCCCAAGCAGCCAGTCGAAGGCCTCC +
Preference number: 6 (lower is better)
Translates to: EKKTAVKSTTLTMAW*NLDSISPSSQSKAS
Trigger: GGAGGCCTTCGACTGGCTGCTTGGGGAGATTGAGTCCAAGTTCAACCAAGCCATTGTGAGTGTTGTGCTCTTCACAGCAGTCTTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574158.1
CDS CAA 90 bp GGAGGAAAAGAAGACTGCTGTGAAGAGCACAACACTCACAATGGCTaGGTTGAACTTGGACTCAATCTCCCCAAGCAGCCAGTCGAAGGC +
Preference number: 6 (lower is better)
Translates to: GGKEDCCEEHNTHNG*VELGLNLPKQPVEG
Trigger: GCCTTCGACTGGCTGCTTGGGGAGATTGAGTCCAAGTTCAACCAAGCCATTGTGAGTGTTGTGCTCTTCACAGCAGTCTTCTTTTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574158.1
CDS CAA 90 bp TGGGGTCATAGTAGATGGCTGTGTTGGCAGTCACCTTCCTCAACGTaGTATGCTCCAGACGGCACAGAATATCCTTGGCTCTCTCAGCAT +
Preference number: 6 (lower is better)
Translates to: WGHSRWLCWQSPSST*YAPDGTEYPWLSQH
Trigger: ATGCTGAGAGAGCCAAGGATATTCTGTGCCGTCTGGAGCATACAACGTTGAGGAAGGTGACTGCCAACACAGCCATCTACTATGACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 72 bp TGCCCAGCACAAAACACTCCTCATCTGAGATGCGTTTaGAGATCTCATGCACTCGCTCTGGACTCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: CPAQNTPHLRCV*RSHALALDSAG
Trigger: TCCTGCTGAGTCCAGAGCGAGTGCATGAGATCTTCAAACGCATCTCAGATGAGGAGTGTTTTGTGCTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp AGAATGCGGACCCGATGCCCCATCATGGACATTTTGTaGAGAGTTGGCTGCCGGTTGAAGATAACAATGTCC +
Preference number: 6 (lower is better)
Translates to: RMRTRCPIMDIL*RVGCRLKITMS
Trigger: GGACATTGTTATCTTCAACCGGCAGCCAACTCTGCACAAAATGTCCATGATGGGGCATCGGGTCCGCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000575547.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp CATTTCATAGTAGACATTCACCCATTCCTGATCCTCTaGCACCACCGTGCTCTGGGGGTTGGGGTCATAGTA +
Preference number: 6 (lower is better)
Translates to: HFIVDIHPFLIL*HHRALGVGVIV
Trigger: TACTATGACCCCAACCCCCAGAGCACGGTGGTGGCAGAGGATCAGGAATGGGTGAATGTCTACTATGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000573603.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp TTGAAGCCAAATGGAATCCGCTTGCCCTCGACGTTCTaGTGTCCAACGACAGCAATGACCTGGGAGATGTTA +
Preference number: 6 (lower is better)
Translates to: LKPNGIRLPSTF*CPTTAMTWEML
Trigger: TAACATCTCCCAGGTCATTGCTGTCGTTGGACAGCAGAACGTCGAGGGCAAGCGGATTCCATTTGGCTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp ATGGCTGTGTTGGCAGTCACCTTCCTCAACGTTGTATaGTCCAGACGGCACAGAATATCCTTGGCTCTCTCA +
Preference number: 6 (lower is better)
Translates to: MAVLAVTFLNVV*SRRHRISLALS
Trigger: TGAGAGAGCCAAGGATATTCTGTGCCGTCTGGAGCATACAACGTTGAGGAAGGTGACTGCCAACACAGCCAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp CCTGCAGGGTCATATCTGTCAGCATGTTGGACTCGATaGAGCGCAGGAAGACATCATCATCCATCTTGTCCA +
Preference number: 6 (lower is better)
Translates to: PAGSYLSACWTR*SAGRHHHPSCP
Trigger: TGGACAAGATGGATGATGATGTCTTCCTGCGCTGCATCGAGTCCAACATGCTGACAGATATGACCCTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp AAGTGCATGTACACCTTGCTGATCTGCTCGATGCCCTaGAGGGTCATATCTGTCAGCATGTTGGACTCGATG +
Preference number: 6 (lower is better)
Translates to: KCMYTLLICSMP*RVISVSMLDSM
Trigger: CATCGAGTCCAACATGCTGACAGATATGACCCTGCAGGGCATCGAGCAGATCAGCAAGGTGTACATGCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp AGAATATCCTTGGCTCTCTCAGCATCTCGAGCGGACTaGCCCAACAGGAAGACAGTAAGCGAAGGAGTCTTT +
Preference number: 6 (lower is better)
Translates to: RISLALSASRAD*PNRKTVSEGVF
Trigger: AAAGACTCCTTCGCTTACTGTCTTCCTGTTGGGCCAGTCCGCTCGAGATGCTGAGAGAGCCAAGGATATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp ATGCCCAGCACAAAACACTCCTCATCTGAGATGCGTTaGAAGATCTCATGCACTCGCTCTGGACTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: MPSTKHSSSEMR*KISCTRSGLSR
Trigger: CCTGCTGAGTCCAGAGCGAGTGCATGAGATCTTCAAACGCATCTCAGATGAGGAGTGTTTTGTGCTGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp AGTAGATGGCTGTGTTGGCAGTCACCTTCCTCAACGTaGTATGCTCCAGACGGCACAGAATATCCTTGGCTC +
Preference number: 6 (lower is better)
Translates to: SRWLCWQSPSST*YAPDGTEYPWL
Trigger: GAGCCAAGGATATTCTGTGCCGTCTGGAGCATACAACGTTGAGGAAGGTGACTGCCAACACAGCCATCTACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp ACATGTGACACGCTGACTTCTAGGACCCCCATTACCTCTTGCATCTaGTTCTCATCGCTGTTCATGATGCGAATACGGAGCACCAGCTTC +
Preference number: 6 (lower is better)
Translates to: TCDTLTSRTPITSCI*FSSLFMMRIRSTSF
Trigger: GAAGCTGGTGCTCCGTATTCGCATCATGAACAGCGATGAGAACAAGATGCAAGAGGTAATGGGGGTCCTAGAAGTCAGCGTGTCACATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573603.1
CDS CAA 90 bp AGGGCCTTGAATTCCCCATCCTCCGTGATGATGATCTTCTTCTTGTaGTCTGTCTGTGGCAAGTGCATGTACACCTTGCTGATCTGCTCG +
Preference number: 6 (lower is better)
Translates to: RALNSPSSVMMIFFL*SVCGKCMYTLLICS
Trigger: CGAGCAGATCAGCAAGGTGTACATGCACTTGCCACAGACAGACAACAAGAAGAAGATCATCATCACGGAGGATGGGGAATTCAAGGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp TGCAGGGCCTTGAATTCCCCATCCTCCGTGATGATGATCTTCTTCTaGTTGTCTGTCTGTGGCAAGTGCATGTACACCTTGCTGATCTGC +
Preference number: 6 (lower is better)
Translates to: CRALNSPSSVMMIFF*LSVCGKCMYTLLIC
Trigger: GCAGATCAGCAAGGTGTACATGCACTTGCCACAGACAGACAACAAGAAGAAGATCATCATCACGGAGGATGGGGAATTCAAGGCCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 72 bp CGCAAAACTTTCATTGTCTTCACCAGGAAGCCCACGTaGAACACAGGCTTGGCCAGTTCAATGTGGCCAAAG +
Preference number: 6 (lower is better)
Translates to: RKTFIVFTRKPT*NTGLASSMWPK
Trigger: CTTTGGCCACATTGAACTGGCCAAGCCTGTGTTTCACGTGGGCTTCCTGGTGAAGACAATGAAAGTTTTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 72 bp TCGGGATGGGTGCTGTGGGTACGGATACAATTGATGTaGCCAGGTATGATGAGGGAGAAGATTTGCTTGCCT +
Preference number: 6 (lower is better)
Translates to: SGWVLWVRIQLM*PGMMREKICLP
Trigger: AGGCAAGCAAATCTTCTCCCTCATCATACCTGGTCACATCAATTGTATCCGTACCCACAGCACCCATCCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp TCAAGTCTGGATCCCAATGAACGAGACAGACTCAGATaGCCTAACCCAGCCTGCCCTATCTTGGAAAGCTTT +
Preference number: 6 (lower is better)
Translates to: SSLDPNERDRLR*PNPACPILESF
Trigger: AAAGCTTTCCAAGATAGGGCAGGCTGGGTTAGGCCATCTGAGTCTGTCTCGTTCATTGGGATCCAGACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576952.1
CDS CCA 72 bp AGTTGTCACACTAAGATTCAAGCGAAAGGTAGACCATaGGAGAATGCGGACCCGATGCCCCATCATGGACAT +
Preference number: 6 (lower is better)
Translates to: SCHTKIQAKGRP*ENADPMPHHGH
Trigger: ATGTCCATGATGGGGCATCGGGTCCGCATTCTCCCATGGTCTACCTTTCGCTTGAATCTTAGTGTGACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000575547.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CCA 72 bp TTCCCAAAGGTGCACAGCCGACCAAGTACAGTGGTTTaGAGGCAAGAATCCTGGACAGAGAAAAATTCAGGC +
Preference number: 6 (lower is better)
Translates to: FPKVHSRPSTVV*RQESWTEKNSG
Trigger: GCCTGAATTTTTCTCTGTCCAGGATTCTTGCCTCCAAACCACTGTACTTGGTCGGCTGTGCACCTTTGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576718.1
CDS CAA 72 bp ACGCTGACTTCTAGGACCCCCATTACCTCTTGCATCTaGTTCTCATCGCTGTTCATGATGCGAATACGGAGC +
Preference number: 6 (lower is better)
Translates to: TLTSRTPITSCI*FSSLFMMRIRS
Trigger: GCTCCGTATTCGCATCATGAACAGCGATGAGAACAAGATGCAAGAGGTAATGGGGGTCCTAGAAGTCAGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573603.1
CDS CAA 72 bp GTTCCCAAAGGTGCACAGCCGACCAAGTACAGTGGTTaGGAGGCAAGAATCCTGGACAGAGAAAAATTCAGG +
Preference number: 6 (lower is better)
Translates to: VPKGAQPTKYSG*EARILDREKFR
Trigger: CCTGAATTTTTCTCTGTCCAGGATTCTTGCCTCCAAACCACTGTACTTGGTCGGCTGTGCACCTTTGGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576718.1
CDS TCA 72 bp CTTCCTCCTCTTGCATCTTGTTCTCATCGCTGTTCATaGTGCGAATACGGAGCACCAGCTTCTCTGCATTGT +
Preference number: 6 (lower is better)
Translates to: LPPLASCSHRCS*CEYGAPASLHC
Trigger: ACAATGCAGAGAAGCTGGTGCTCCGTATTCGCATCATGAACAGCGATGAGAACAAGATGCAAGAGGAGGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp AAACACTCCTCATCTGAGATGCGTTTGAAGATCTCATaGACTCGCTCTGGACTCAGCAGGATCTTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: KHSSSEMRLKIS*TRSGLSRIFFS
Trigger: GGAGAAGAAGATCCTGCTGAGTCCAGAGCGAGTGCATGAGATCTTCAAACGCATCTCAGATGAGGAGTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp TGGCAGGTGCAAGTTCATCTCATCCCCGTCAAAGTCTaGATTGTACGGAGTTGTCACACTAAGATTCAAGCG +
Preference number: 6 (lower is better)
Translates to: WQVQVHLIPVKV*IVRSCHTKIQA
Trigger: CGCTTGAATCTTAGTGTGACAACTCCGTACAATGCAGACTTTGACGGGGATGAGATGAACTTGCACCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000575547.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS TCA 72 bp CCATTACCTCTTGCATCTTGTTCTCATCGCTGTTCATaGTGCGAATACGGAGCACCAGCTTCTCTGCATTGT +
Preference number: 6 (lower is better)
Translates to: PLPLASCSHRCS*CEYGAPASLHC
Trigger: ACAATGCAGAGAAGCTGGTGCTCCGTATTCGCATCATGAACAGCGATGAGAACAAGATGCAAGAGGTAATGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573603.1
CDS GCA 72 bp TGTGACACGCTGACTTCTAGGACCCCCATTACCTCTTaGATCTTGTTCTCATCGCTGTTCATGATGCGAATA +
Preference number: 6 (lower is better)
Translates to: CDTLTSRTPITS*ILFSSLFMMRI
Trigger: TATTCGCATCATGAACAGCGATGAGAACAAGATGCAAGAGGTAATGGGGGTCCTAGAAGTCAGCGTGTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573603.1
CDS CAA 72 bp TTCTTGGGCTGTCCCTTGGACTTAGCCAGGATATCCTaGATCTTTGGGTTGTTAGAGTCCACAAGCAGTTTG +
Preference number: 6 (lower is better)
Translates to: FLGCPLDLARIS*IFGLLESTSSL
Trigger: CAAACTGCTTGTGGACTCTAACAACCCAAAGATCAAGGATATCCTGGCTAAGTCCAAGGGACAGCCCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000572844.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp AATTCCCCATCCTCCGTGATGATGATCTTCTTCTTGTaGTCTGTCTGTGGCAAGTGCATGTACACCTTGCTG +
Preference number: 6 (lower is better)
Translates to: NSPSSVMMIFFL*SVCGKCMYTLL
Trigger: CAGCAAGGTGTACATGCACTTGCCACAGACAGACAACAAGAAGAAGATCATCATCACGGAGGATGGGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 90 bp TCATCGCTGTTCATGATGCGAATACGGAGCACCAGCTTCTCTGCATaGTCATCATTAAAGATGCAGTTCAAGTCGTCACCAAAACCAGCA +
Preference number: 6 (lower is better)
Translates to: SSLFMMRIRSTSFSA*SSLKMQFKSSPKPA
Trigger: TGCTGGTTTTGGTGACGACTTGAACTGCATCTTTAATGATGACAATGCAGAGAAGCTGGTGCTCCGTATTCGCATCATGAACAGCGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000573603.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS GCA 72 bp GCTGTTCATGATGCGAATACGGAGCACCAGCTTCTCTaGATTGTCATCATTAAAGATGCAGTTCAAGTCGTC +
Preference number: 6 (lower is better)
Translates to: AVHDANTEHQLL*IVIIKDAVQVV
Trigger: GACGACTTGAACTGCATCTTTAATGATGACAATGCAGAGAAGCTGGTGCTCCGTATTCGCATCATGAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000573603.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp AGGTGCAAGTTCATCTCATCCCCGTCAAAGTCTGCATaGTACGGAGTTGTCACACTAAGATTCAAGCGAAAG +
Preference number: 6 (lower is better)
Translates to: RCKFISSPSKSA*YGVVTLRFKRK
Trigger: CTTTCGCTTGAATCTTAGTGTGACAACTCCGTACAATGCAGACTTTGACGGGGATGAGATGAACTTGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000572844.1
ENST00000575547.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2
CDS CAA 72 bp TTCATGATGCGAATACGGAGCACCAGCTTCTCTGCATaGTCATCATTAAAGATGCAGTTCAAGTCGTCACCA +
Preference number: 6 (lower is better)
Translates to: FMMRIRSTSFSA*SSLKMQFKSSP
Trigger: TGGTGACGACTTGAACTGCATCTTTAATGATGACAATGCAGAGAAGCTGGTGCTCCGTATTCGCATCATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000573603.1
ENST00000617998.6
ENST00000643490.2
ENST00000645939.2
ENST00000674977.2