RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POLR1B (Homo sapiens)

Ensembl gene IDs: ENSG00000125630

Ensembl transcript IDs: ENST00000263331.10, ENST00000333990.10, ENST00000409894.7, ENST00000417433.6, ENST00000424062.1, ENST00000430293.1, ENST00000430769.1, ENST00000438748.5, ENST00000448770.5, ENST00000458012.2, ENST00000468475.1, ENST00000496238.5, ENST00000537335.5, ENST00000541869.5

Found 1202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCAGGACTCTGGCAGCAGCCTGCGTACTGTGGTGGTCCTCATCTTaGCAAAATCAGCCCCTCTGTGCACGCAGCGGAAATGGGAGAGGT +
Preference number: 1 (lower is better)
Translates to: PRTLAAACVLWWSSS*QNQPLCARSGNGRG
Trigger: ACCTCTCCCATTTCCGCTGCGTGCACAGAGGGGCTGATTTTGCCAAGATGAGGACCACCACAGTACGCAGGCTGCTGCCAGAGTCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR TCA 90 bp GCCAACCATGACACCGTCCAGCAGGACAGGGTAGCACTCACTGTATaGTCGGTGGGGAGCTCCATCAATGGGAGTGACCCCCAAGTTGCA +
Preference number: 1 (lower is better)
Translates to: ANHDTVQQDRVALTV*SVGSSINGSDPQVA
Trigger: TGCAACTTGGGGGTCACTCCCATTGATGGAGCTCCCCACCGATCATACAGTGAGTGCTACCCTGTCCTGCTGGACGGTGTCATGGTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CCA 90 bp GCCGTATACACAAACTGTGTGACAACCTCACATACGGCAGTTAGGTaGTTCATCAGGCCACAGGGCTCCCCGTCTGGGGTATGCACGGGA +
Preference number: 1 (lower is better)
Translates to: AVYTNCVTTSHTAVR*FIRPQGSPSGVCTG
Trigger: TCCCGTGCATACCCCAGACGGGGAGCCCTGTGGCCTGATGAACCACCTAACTGCCGTATGTGAGGTTGTCACACAGTTTGTGTATACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR TCA 90 bp AATCTGCGATGCCTGGAGCAAGATCCTTATCCACCCAGCCAACCATaGCACCGTCCAGCAGGACAGGGTAGCACTCACTGTATGATCGGT +
Preference number: 1 (lower is better)
Translates to: NLRCLEQDPYPPSQP*HRPAGQGSTHCMIG
Trigger: ACCGATCATACAGTGAGTGCTACCCTGTCCTGCTGGACGGTGTCATGGTTGGCTGGGTGGATAAGGATCTTGCTCCAGGCATCGCAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR GCA 90 bp CAGACCAAGAAGGGGGTGGCTTCTCCAACAGTGGAGAGAGTAAACTaGCACACTTCACACACACATGGGCTACCGACCGATCTGAGCAGT +
Preference number: 1 (lower is better)
Translates to: QTKKGVASPTVERVN*HTSHTHGLPTDLSS
Trigger: ACTGCTCAGATCGGTCGGTAGCCCATGTGTGTGTGAAGTGTGGCAGTTTACTCTCTCCACTGTTGGAGAAGCCACCCCCTTCTTGGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR GCA 90 bp AGCTGTCAACTTCCCACGGTAGGTACTCCTTCGGCCCCGGCATTCTaGTGGATAAACATTGGCCTCTTTGCAGATGGTCCCTTTTGGAAC +
Preference number: 1 (lower is better)
Translates to: SCQLPTVGTPSAPAF*WINIGLFADGPFWN
Trigger: GTTCCAAAAGGGACCATCTGCAAAGAGGCCAATGTTTATCCAGCAGAATGCCGGGGCCGAAGGAGTACCTACCGTGGGAAGTTGACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CCA 90 bp TGTCAACTTCCCACGGTAGGTACTCCTTCGGCCCCGGCATTCTGCTaGATAAACATTGGCCTCTTTGCAGATGGTCCCTTTTGGAACTGT +
Preference number: 1 (lower is better)
Translates to: CQLPTVGTPSAPAFC*INIGLFADGPFWNC
Trigger: ACAGTTCCAAAAGGGACCATCTGCAAAGAGGCCAATGTTTATCCAGCAGAATGCCGGGGCCGAAGGAGTACCTACCGTGGGAAGTTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CCA 90 bp ATGTCCTCAGCCGGCCACAATCTGCTTAAAATGCCCTTCTGCCCATaGCGACTGGCAAATTTATCTCCGATAGTTGGGTTCCGAGGCACT +
Preference number: 1 (lower is better)
Translates to: MSSAGHNLLKMPFCP*RLANLSPIVGFRGT
Trigger: AGTGCCTCGGAACCCAACTATCGGAGATAAATTTGCCAGTCGCCATGGGCAGAAGGGCATTTTAAGCAGATTGTGGCCGGCTGAGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CCA 90 bp TCTAAGGCCGAGTTCTCCTCTGAGAAGATGAAGGGTGTAGCATCATaGCAGAGACCATGCAAAGCTGCAGACTTCCCGGCCATACTCTCA +
Preference number: 1 (lower is better)
Translates to: SKAEFSSEKMKGVAS*QRPCKAADFPAILS
Trigger: TGAGAGTATGGCCGGGAAGTCTGCAGCTTTGCATGGTCTCTGCCATGATGCTACACCCTTCATCTTCTCAGAGGAGAACTCGGCCTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR GCA 90 bp AAAGGCATGTCCTCAGCCGGCCACAATCTGCTTAAAATGCCCTTCTaGCCATGGCGACTGGCAAATTTATCTCCGATAGTTGGGTTCCGA +
Preference number: 1 (lower is better)
Translates to: KGMSSAGHNLLKMPF*PWRLANLSPIVGFR
Trigger: TCGGAACCCAACTATCGGAGATAAATTTGCCAGTCGCCATGGGCAGAAGGGCATTTTAAGCAGATTGTGGCCGGCTGAGGACATGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR TCA 90 bp AATCAGCCCCTCTGTGCACGCAGCGGAAATGGGAGAGGTAGCGTATaGAGTTCAGCTTGTCAGCCACAACACAAAGTCCAGAATCTTGTA +
Preference number: 1 (lower is better)
Translates to: NQPLCARSGNGRGSV*SSACQPQHKVQNLV
Trigger: TACAAGATTCTGGACTTTGTGTTGTGGCTGACAAGCTGAACTTCATACGCTACCTCTCCCATTTCCGCTGCGTGCACAGAGGGGCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR TCA 90 bp TGCTTACCCATCTGGCATTGGTACATGTTCCGTGGACTCTGGTTGTaGTCAGAGAAAGGGATGAAGTTGGCAATCACACTCAGCAGGCTG +
Preference number: 1 (lower is better)
Translates to: CLPIWHWYMFRGLWL*SEKGMKLAITLSRL
Trigger: CAGCCTGCTGAGTGTGATTGCCAACTTCATCCCTTTCTCTGATCACAACCAGAGTCCACGGAACATGTACCAATGCCAGATGGGTAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR GCA 90 bp TGCAGTTTTGCTCCTATAAACGGCAATCCATCGTCATCTAACTTCTaGAGAACGCGTGGGTCACCAGGTTTGATGCCAAACACCAGGCTA +
Preference number: 1 (lower is better)
Translates to: CSFAPINGNPSSSNF*RTRGSPGLMPNTRL
Trigger: TAGCCTGGTGTTTGGCATCAAACCTGGTGACCCACGCGTTCTGCAGAAGTTAGATGACGATGGATTGCCGTTTATAGGAGCAAAACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR GCA 90 bp TTCTCCTCTGAGAAGATGAAGGGTGTAGCATCATGGCAGAGACCATaGAAAGCTGCAGACTTCCCGGCCATACTCTCAATTAACATCCCA +
Preference number: 1 (lower is better)
Translates to: FSSEKMKGVASWQRP*KAADFPAILSINIP
Trigger: TGGGATGTTAATTGAGAGTATGGCCGGGAAGTCTGCAGCTTTGCATGGTCTCTGCCATGATGCTACACCCTTCATCTTCTCAGAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CCA 90 bp TTTCTCTCTCAACACCTTAAAATGACGAAGAGAATCTGCGATGCCTaGAGCAAGATCCTTATCCACCCAGCCAACCATGACACCGTCCAG +
Preference number: 1 (lower is better)
Translates to: FLSQHLKMTKRICDA*SKILIHPANHDTVQ
Trigger: CTGGACGGTGTCATGGTTGGCTGGGTGGATAAGGATCTTGCTCCAGGCATCGCAGATTCTCTTCGTCATTTTAAGGTGTTGAGAGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CCA 90 bp ATGAAGTTGGCAATCACACTCAGCAGGCTGTGTGGAAAGAGTTCCTaGTGTGTGGTAACTCCAGCAAAAACTTCATCCTCAAAGATAGCG +
Preference number: 1 (lower is better)
Translates to: MKLAITLSRLCGKSS*CVVTPAKTSSSKIA
Trigger: CGCTATCTTTGAGGATGAAGTTTTTGCTGGAGTTACCACACACCAGGAACTCTTTCCACACAGCCTGCTGAGTGTGATTGCCAACTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CCA 90 bp AAAGCCCATAGTTTGCTTACCCATCTGGCATTGGTACATGTTCCGTaGACTCTGGTTGTGATCAGAGAAAGGGATGAAGTTGGCAATCAC +
Preference number: 1 (lower is better)
Translates to: KAHSLLTHLALVHVP*TLVVIRERDEVGNH
Trigger: GTGATTGCCAACTTCATCCCTTTCTCTGATCACAACCAGAGTCCACGGAACATGTACCAATGCCAGATGGGTAAGCAAACTATGGGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CCA 90 bp AATGCCCTTCTGCCCATGGCGACTGGCAAATTTATCTCCGATAGTTaGGTTCCGAGGCACTCTCATAGTGATGCAAACACACTTGAATTT +
Preference number: 1 (lower is better)
Translates to: NALLPMATGKFISDS*VPRHSHSDANTLEF
Trigger: AAATTCAAGTGTGTTTGCATCACTATGAGAGTGCCTCGGAACCCAACTATCGGAGATAAATTTGCCAGTCGCCATGGGCAGAAGGGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CCA 90 bp GATACAGATGCACTGGTTAAACAGGAACTCCGCAGCTTGCTCATTTaGGTACCAGTCAGGAACATTGAGTTTTACTCTGAAGCATTCACC +
Preference number: 1 (lower is better)
Translates to: DTDALVKQELRSLLI*VPVRNIEFYSEAFT
Trigger: GGTGAATGCTTCAGAGTAAAACTCAATGTTCCTGACTGGTACCCAAATGAGCAAGCTGCGGAGTTCCTGTTTAACCAGTGCATCTGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR GCA 90 bp TTCAAGTGGATACAGATGCACTGGTTAAACAGGAACTCCGCAGCTTaGTCATTTGGGTACCAGTCAGGAACATTGAGTTTTACTCTGAAG +
Preference number: 1 (lower is better)
Translates to: FKWIQMHWLNRNSAA*SFGYQSGTLSFTLK
Trigger: CTTCAGAGTAAAACTCAATGTTCCTGACTGGTACCCAAATGAGCAAGCTGCGGAGTTCCTGTTTAACCAGTGCATCTGTATCCACTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CCA 90 bp ATACTCTCAATTAACATCCCAATGGTCATGCGGGATGGAAAACCATaGGGATTGAACAGAATGTCTGGGACCATCCCACTCTCAGTAAAA +
Preference number: 1 (lower is better)
Translates to: ILSINIPMVMRDGKP*GLNRMSGTIPLSVK
Trigger: TTTTACTGAGAGTGGGATGGTCCCAGACATTCTGTTCAATCCCCATGGTTTTCCATCCCGCATGACCATTGGGATGTTAATTGAGAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CCA 90 bp GCATTCTGCTGGATAAACATTGGCCTCTTTGCAGATGGTCCCTTTTaGAACTGTAGGTGGACTGATAACAGCATCCAGAATAGTAAAAGA +
Preference number: 1 (lower is better)
Translates to: AFCWINIGLFADGPF*NCRWTDNSIQNSKR
Trigger: TCTTTTACTATTCTGGATGCTGTTATCAGTCCACCTACAGTTCCAAAAGGGACCATCTGCAAAGAGGCCAATGTTTATCCAGCAGAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CCA 90 bp CATTGGTCCCAATTGGATAGTTATCCATGTCATAATAATCATACATaGAGGGTCTCACCAAGGGACTCTGAGGAGTCTGAAGACGATACA +
Preference number: 1 (lower is better)
Translates to: HWSQLDSYPCHNNHT*RVSPRDSEESEDDT
Trigger: TGTATCGTCTTCAGACTCCTCAGAGTCCCTTGGTGAGACCCTCCATGTATGATTATTATGACATGGATAACTATCCAATTGGGACCAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CCA 90 bp ATAAACATTGGCCTCTTTGCAGATGGTCCCTTTTGGAACTGTAGGTaGACTGATAACAGCATCCAGAATAGTAAAAGAGATACGCTCATC +
Preference number: 1 (lower is better)
Translates to: INIGLFADGPFWNCR*TDNSIQNSKRDTLI
Trigger: GATGAGCGTATCTCTTTTACTATTCTGGATGCTGTTATCAGTCCACCTACAGTTCCAAAAGGGACCATCTGCAAAGAGGCCAATGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR TCA 90 bp CCTCCATGCACTCTCCTTTGGCTAAAGCAAAGAGCTTTCGCGTCATaGGACAAAGCATATAAAACTTTTCAGTATTGGATTTCAAGTGGA +
Preference number: 1 (lower is better)
Translates to: PPCTLLWLKQRAFAS*DKAYKTFQYWISSG
Trigger: TCCACTTGAAATCCAATACTGAAAAGTTTTATATGCTTTGTCTCATGACGCGAAAGCTCTTTGCTTTAGCCAAAGGAGAGTGCATGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CCA 90 bp ATAGCCAGTGTAAGAAATCACAGCAACGATGGCATTGGTCCCAATTaGATAGTTATCCATGTCATAATAATCATACATGGAGGGTCTCAC +
Preference number: 1 (lower is better)
Translates to: IASVRNHSNDGIGPN*IVIHVIIIIHGGSH
Trigger: GTGAGACCCTCCATGTATGATTATTATGACATGGATAACTATCCAATTGGGACCAATGCCATCGTTGCTGTGATTTCTTACACTGGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR TCA 90 bp CTATTGATACATGCAACTACCTGGATGTATCTCAAGGGAATGGAGTaGAAAGGCCATTCTCAAAGGTTATACTTCGTGATCCTATTTACG +
Preference number: 1 (lower is better)
Translates to: LLIHATTWMYLKGME*KGHSQRLYFVILFT
Trigger: CGTAAATAGGATCACGAAGTATAACCTTTGAGAATGGCCTTTTCACTCCATTCCCTTGAGATACATCCAGGTAGTTGCATGTATCAATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR TCA 90 bp ATATCACATGCAACACAAATGAGTGCATGTAAAATGGGTGAAATTTaGATAAGCTCTGTGGACTGTTCCAATGCCAATTTCTTAGTGGTG +
Preference number: 1 (lower is better)
Translates to: ISHATQMSACKMGEI*ISSVDCSNANFLVV
Trigger: CACCACTAAGAAATTGGCATTGGAACAGTCCACAGAGCTTATTCAAATTTCACCCATTTTACATGCACTCATTTGTGTTGCATGTGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR TCA 90 bp TGTTTTTGTGTCGAACAACCCTCTTCCATTACAATCCTTAACATCTaGGAAACAGAGTTCCTAAGGAAAGAATCATCCTCTTTTCCTTTG +
Preference number: 1 (lower is better)
Translates to: CFCVEQPSSITILNI*ETEFLRKESSSFPL
Trigger: CAAAGGAAAAGAGGATGATTCTTTCCTTAGGAACTCTGTTTCTCAGATGTTAAGGATTGTAATGGAAGAGGGTTGTTCGACACAAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000430293.1
3UTR GCA 90 bp AACATCAAGTTAAACAACATCCAGTTTCACTTTGATGTTCATAGCTaGCAGTTCAGCTACAAAATACCGAAAAACATAAGGCACAGAAAC +
Preference number: 1 (lower is better)
Translates to: NIKLNNIQFHFDVHS*QFSYKIPKNIRHRN
Trigger: GTTTCTGTGCCTTATGTTTTTCGGTATTTTGTAGCTGAACTGGCAGCTATGAACATCAAAGTGAAACTGGATGTTGTTTAACTTGATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CCA 90 bp ATAGTGTATATACTATCCATGGTTTCAGACACTCACTGGGAGTCTTaGGATATAATCTTCAAAGATAAAGGGGGACTATTATACCTGATT +
Preference number: 1 (lower is better)
Translates to: IVYILSMVSDTHWES*DIIFKDKGGLLYLI
Trigger: AATCAGGTATAATAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTCCCAGTGAGTGTCTGAAACCATGGATAGTATATACACTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR-3UTR GCA 90 bp GTGGTCCTCATCTTGGCAAAATCAGCCCCTCTGTGCACGCAGCGGAAATGGGAGTCTGCCTCCTCATGGTaGTCAATGAGGGCTTGTGGG +
Preference number: 2 (lower is better)
Translates to: VVLILAKSAPLCTQRKWESASSW*SMRACG
Trigger: CCCACAAGCCCTCATTGAGCACCATGAGGAGGCAGA...CTCCCATTTCCGCTGCGTGCACAGAGGGGCTGATTTTGCCAAGATGAGGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR TCA 90 bp GACTCTGGCAGCAGCCTGCGTACTGTGGTGGTCCTCATCTTGGCAAAATCAGCCGGGAGAGGTAGCGTATaGAGTTCAGCTTGTCAGCCA +
Preference number: 2 (lower is better)
Translates to: DSGSSLRTVVVLILAKSAGRGSV*SSACQP
Trigger: TGGCTGACAAGCTGAACTTCATACGCTACCTCTCCC...GGCTGATTTTGCCAAGATGAGGACCACCACAGTACGCAGGCTGCTGCCAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR GCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTAGTGGCGTGAGCCACTaGGCCCATCCTGCTAAGCCT +
Preference number: 2 (lower is better)
Translates to: GVGNLGLERRLVTVCSSISGVSH*AHPAKP
Trigger: AGGCTTAGCAGGATGGGCGCAGTGGCTCACGCCACT...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR-3UTR TCA 90 bp GACACTTCCATGGGCAAAGCCTCGTTCCCAAGAGGCCTTATTCACAATCATGGCAGAGCTGACCCGGTGTaGGGACTTCCTGGTTCACCA +
Preference number: 2 (lower is better)
Translates to: DTSMGKASFPRGLIHNHGRADPV*GLPGSP
Trigger: TGGTGAACCAGGAAGTCCTCACACCGGGTCAGCTCT...GCCATGATTGTGAATAAGGCCTCTTGGGAACGAGGCTTTGCCCATGGAAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR GCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTCTGTCCTTGAACTCCTaGACTCAAATGATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVLSLNS*TQMILP
Trigger: TGGGAGGATCATTTGAGTGCAGGAGTTCAAGGACAG...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR GCA 90 bp TCTGTGCACGCAGCGGAAATGGGAGAGGTAGCGTATGAAGTTCAGCTTGTCAGCTCGGCCCCGGCATTCTaGTGGATAAACATTGGCCTC +
Preference number: 2 (lower is better)
Translates to: SVHAAEMGEVAYEVQLVSSAPAF*WINIGL
Trigger: GAGGCCAATGTTTATCCAGCAGAATGCCGGGGCCGA...GCTGACAAGCTGAACTTCATACGCTACCTCTCCCATTTCCGCTGCGTGCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR CCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTGCACAGCACCATGCCTaGCTTCCAAAATGGATGAAT +
Preference number: 2 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVAQHHA*LPKWMN
Trigger: ATTCATCCATTTTGGAAGCCAGGCATGGTGCTGTGC...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CCA 90 bp GCAGTTAGGTGGTTCATCAGGCCACAGGGCTCCCCGTCTGGGGTATGCACGGGATGTTCATGGAAACACTaGTCTTCTGAGCCTTCTTAT +
Preference number: 2 (lower is better)
Translates to: AVRWFIRPQGSPSGVCTGCSWKH*SSEPSY
Trigger: ATAAGAAGGCTCAGAAGACCAGTGTTTCCATGAACA...TCCCGTGCATACCCCAGACGGGGAGCCCTGTGGCCTGATGAACCACCTAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR TCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCGGATTAACAGGTGTGTaGCACTCACTGCCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSGLTGV*HSLPAE
Trigger: CTCAGCAGGCAGTGAGTGTCACACACCTGTTAATCC...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR GCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTGCACCCAGCCAGTTTTaGTTTATGCAGTTTCAGTTA +
Preference number: 2 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVAPSQF*FMQFQL
Trigger: TAACTGAAACTGCATAAAGCAAAACTGGCTGGGTGC...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR-3UTR CCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTCAATTAACATCCCAATaGTCATGCGGGATGGAAAAC +
Preference number: 2 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVQLTSQ*SCGMEN
Trigger: GTTTTCCATCCCGCATGACCATTGGGATGTTAATTG...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR GCA 90 bp GACACTTCCATGGGCAAAGCCTCGTTCCCAAGAGGCCTTATTCACAATCATGGCAGGAACTCCGCAGCTTaGTCATTTGGGTACCAGTCA +
Preference number: 2 (lower is better)
Translates to: DTSMGKASFPRGLIHNHGRNSAA*SFGYQS
Trigger: TGACTGGTACCCAAATGAGCAAGCTGCGGAGTTCCT...GCCATGATTGTGAATAAGGCCTCTTGGGAACGAGGCTTTGCCCATGGAAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR CCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTATACATGCAACTACCTaGATGTATCTCAAGGGAATG +
Preference number: 2 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVIHATT*MYLKGM
Trigger: CATTCCCTTGAGATACATCCAGGTAGTTGCATGTAT...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR CAA 90 bp TCGATAGTGTCACTGCGACTACACAGAGTACAGTTGTATTTTCTGTaGCGCATGGCAGACCAAGAAGGGGGTGGCTTCTCCAACAGTGGA +
Preference number: 2 (lower is better)
Translates to: SIVSLRLHRVQLYFL*RMADQEGGGFSNSG
Trigger: TCCACTGTTGGAGAAGCCACCCCCTTCTTGGTCTGCCATGCGCAACAGAAAATACAACTGTACTCTGTGTAGTCGCAGTGACACTATCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR TCA 90 bp TTTGCTTACCCATCTGGCATTGGTACATGTTCCGTGGACTCTGGTTGTGATCAGGGATTAACAGGTGTGTaGCACTCACTGCCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: FAYPSGIGTCSVDSGCDQGLTGV*HSLPAE
Trigger: CTCAGCAGGCAGTGAGTGTCACACACCTGTTAATCC...CTGATCACAACCAGAGTCCACGGAACATGTACCAATGCCAGATGGGTAAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR TCA 90 bp CAGAATGTCTGGGACCATCCCACTCTCAGTAAAAGGCATGTCCTCAGCCGGCCATTTCAGAGAGGTCTATaGACTCAGACTTGTAGACAC +
Preference number: 2 (lower is better)
Translates to: QNVWDHPTLSKRHVLSRPFQRGL*TQTCRH
Trigger: GTGTCTACAAGTCTGAGTTCATAGACCTCTCTGAAA...TGGCCGGCTGAGGACATGCCTTTTACTGAGAGTGGGATGGTCCCAGACATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR GCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTAGATGCACAGCACCATaGCTGGCTTCCAAAATGGAT +
Preference number: 2 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIRCTAP*LASKMD
Trigger: ATCCATTTTGGAAGCCAGGCATGGTGCTGTGCATCT...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTGCCTGGCTTCCAAAATaGATGAATCTTATTTCACTA +
Preference number: 2 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVAWLPK*MNLISL
Trigger: TAGTGAAATAAGATTCATCCATTTTGGAAGCCAGGC...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTGCACAGCACCATGCCTaGCTTCCAAAATGGATGAAT +
Preference number: 2 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIAQHHA*LPKWMN
Trigger: ATTCATCCATTTTGGAAGCCAGGCATGGTGCTGTGC...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTGAAAGAAAACATAAGTaGCACTCTACACACTGCTAT +
Preference number: 2 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVERKHK*HSTHCY
Trigger: ATAGCAGTGTGTAGAGTGCCACTTATGTTTTCTTTC...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTTTAATGCCCCCAAACTaGAAACAACCAAAATGTTCA +
Preference number: 2 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVLMPPN*KQPKCS
Trigger: TGAACATTTTGGTTGTTTCCAGTTTGGGGGCATTAA...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR-3UTR CCA 90 bp ACAAACTGTGTGACAACCTCACATACGGCAGTTAGGTGGTTCATCAGGCCACAGGCCCCGGCATTCTGCTaGATAAACATTGGCCTCTTT +
Preference number: 2 (lower is better)
Translates to: TNCVTTSHTAVRWFIRPQAPAFC*INIGLF
Trigger: AAAGAGGCCAATGTTTATCCAGCAGAATGCCGGGGC...CTGTGGCCTGATGAACCACCTAACTGCCGTATGTGAGGTTGTCACACAGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR GCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTACAAGTGATTGCTCCTaGCTAGGCCTCCTAAAATGT +
Preference number: 2 (lower is better)
Translates to: GVGNLGLERRLVTVCSSITSDCS*LGLLKC
Trigger: ACATTTTAGGAGGCCTAGGCAGGAGCAATCACTTGT...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR-3UTR CCA 90 bp TTTGCTTACCCATCTGGCATTGGTACATGTTCCGTGGACTCTGGTTGTGATCAGGCCTGCGTACTGTGGTaGTCCTCATCTTGGCAAAAT +
Preference number: 2 (lower is better)
Translates to: FAYPSGIGTCSVDSGCDQACVLW*SSSWQN
Trigger: ATTTTGCCAAGATGAGGACCACCACAGTACGCAGGC...CTGATCACAACCAGAGTCCACGGAACATGTACCAATGCCAGATGGGTAAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR CCA 90 bp CACTCTCATAGTGATGCAAACACACTTGAATTTTCCACTCCCAGTGTCATTACTACAGGGCTCCCCGTCTaGGGTATGCACGGGACAAAG +
Preference number: 2 (lower is better)
Translates to: HSHSDANTLEFSTPSVITTGLPV*GMHGTK
Trigger: CTTTGTCCCGTGCATACCCCAGACGGGGAGCCCTGT...AGTAATGACACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCACTATGAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CAA 90 bp ACAGAAACAGTATCGATAGTGTCACTGCGACTACACAGAGTACAGTaGTATTTTCTGTTGCGCATGGCAGACCAAGAAGGGGGTGGCTTC +
Preference number: 2 (lower is better)
Translates to: TETVSIVSLRLHRVQ*YFLLRMADQEGGGF
Trigger: GAAGCCACCCCCTTCTTGGTCTGCCATGCGCAACAGAAAATACAACTGTACTCTGTGTAGTCGCAGTGACACTATCGATACTGTTTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR GCA 90 bp CCACCCTGGACATTTCTTCCCCCAATAGGCTGGTTGGTGACTCTGTCTCGGGCTAGACTTGTCACCGTATaGTCTTCCATTTATCAATAT +
Preference number: 2 (lower is better)
Translates to: PPWTFLPPIGWLVTLSRARLVTV*SSIYQY
Trigger: ATATTGATAAATGGAAGAGCATACGGTGACAAGTCT...AGCCCGAGACAGAGTCACCAACCAGCCTATTGGGGGAAGAAATGTCCAGGGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR GCA 90 bp CTGCCCATGGCGACTGGCAAATTTATCTCCGATAGTTGGGTTCCGAGGCACTCTAGAAAAGCTGACAAGTaGCTTAAGTGCAAATCCCAA +
Preference number: 2 (lower is better)
Translates to: LPMATGKFISDSWVPRHSRKADK*LKCKSQ
Trigger: TTGGGATTTGCACTTAAGGCACTTGTCAGCTTTTCT...AGAGTGCCTCGGAACCCAACTATCGGAGATAAATTTGCCAGTCGCCATGGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR GCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATATCCCCGTCTGGGGTATaGACGGGACAAAGGAAGCCC +
Preference number: 2 (lower is better)
Translates to: GLERRLVTVCSSIYQYFISPSGV*TGQRKP
Trigger: GGGCTTCCTTTGTCCCGTGCATACCCCAGACGGGGA...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR CCA 90 bp GTCACTGCGACTACACAGAGTACAGTTGTATTTTCTGTTGCGCATGGCAGACCAGGTGTGAGGACTTCCTaGTTCACCAAACTATCAGGA +
Preference number: 2 (lower is better)
Translates to: VTATTQSTVVFSVAHGRPGVRTS*FTKLSG
Trigger: TCCTGATAGTTTGGTGAACCAGGAAGTCCTCACACC...TGGTCTGCCATGCGCAACAGAAAATACAACTGTACTCTGTGTAGTCGCAGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR TCA 90 bp TCAGACACTCACTGGGAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTAGGATTAACAGGTGTGTaGCACTCACTGCCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: SDTHWESWDIIFKDKGGLGLTGV*HSLPAE
Trigger: CTCAGCAGGCAGTGAGTGTCACACACCTGTTAATCC...TAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTCCCAGTGAGTGTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR-3UTR TCA 90 bp TCTGATAGTCCTCTTAATCCAAAAGGTCAACATCAAGTTAAACAACATCCAGTTCCACCCAGCCAACCATaGCACCGTCCAGCAGGACAG +
Preference number: 2 (lower is better)
Translates to: SDSPLNPKGQHQVKQHPVPPSQP*HRPAGQ
Trigger: CTGTCCTGCTGGACGGTGTCATGGTTGGCTGGGTGG...AACTGGATGTTGTTTAACTTGATGTTGACCTTTTGGATTAAGAGGACTATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR GCA 90 bp TGTAGACACTTCCATGGGCAAAGCCTCGTTCCCAAGAGGCCTTATTCACAATCAGAAGAGAATCTGCGATaGCTGGAGCAAGATCCTTAT +
Preference number: 2 (lower is better)
Translates to: CRHFHGQSLVPKRPYSQSEENLR*LEQDPY
Trigger: ATAAGGATCTTGCTCCAGGCATCGCAGATTCTCTTC...TGATTGTGAATAAGGCCTCTTGGGAACGAGGCTTTGCCCATGGAAGTGTCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR CCA 90 bp CACTTCCATGGGCAAAGCCTCGTTCCCAAGAGGCCTTATTCACAATCATGGCATTTGGTTTTCAGGTCTTaGTTGAGAGTTCTAACACCG +
Preference number: 2 (lower is better)
Translates to: HFHGQSLVPKRPYSQSWHLVFRS*LRVLTP
Trigger: CGGTGTTAGAACTCTCAACCAAGACCTGAAAACCAA...ATGCCATGATTGTGAATAAGGCCTCTTGGGAACGAGGCTTTGCCCATGGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR CCA 90 bp TTTGCTTACCCATCTGGCATTGGTACATGTTCCGTGGACTCTGGTTGTGATCAGCTGTCCTGCTCAAGATaGATTAACAGGTGTGTGACA +
Preference number: 2 (lower is better)
Translates to: FAYPSGIGTCSVDSGCDQLSCSR*INRCVT
Trigger: TGTCACACACCTGTTAATCCATCTTGAGCAGGACAG...CTGATCACAACCAGAGTCCACGGAACATGTACCAATGCCAGATGGGTAAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR CCA 90 bp GGAAAACCATGGGGATTGAACAGAATGTCTGGGACCATCCCACTCTCAGTAAAAGCAGATGGTCCCTTTTaGAACTGTAGGTGGACTGAT +
Preference number: 2 (lower is better)
Translates to: GKPWGLNRMSGTIPLSVKADGPF*NCRWTD
Trigger: ATCAGTCCACCTACAGTTCCAAAAGGGACCATCTGC...TTTTACTGAGAGTGGGATGGTCCCAGACATTCTGTTCAATCCCCATGGTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CAA 90 bp GCGACATTCATGAAGATCTGTTCCATAGTTCCAATTAGCTCTTCTTaGCCCAATGCTAAGTTCTGCACAGGCCGTACCAGTCTACAAGGA +
Preference number: 2 (lower is better)
Translates to: ATFMKICSIVPISSS*PNAKFCTGRTSLQG
Trigger: TCCTTGTAGACTGGTACGGCCTGTGCAGAACTTAGCATTGGGCAAAGAAGAGCTAATTGGAACTATGGAACAGATCTTCATGAATGTCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR TCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCTTTCACTATGCTAAGTaGAATAAGCCAGTCACAGGA +
Preference number: 2 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPFHYAK*NKPVTG
Trigger: TCCTGTGACTGGCTTATTTCACTTAGCATAGTGAAA...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR TCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAGGTGGGTGGATCACTTaGGGTCAGGGTCTTCAAGAC +
Preference number: 2 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIGGWIT*GQGLQD
Trigger: GTCTTGAAGACCCTGACCTCAAGTGATCCACCCACC...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR GCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCTCACAGGACAAATATTaGATGATCCCACTATATGAG +
Preference number: 2 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSSQDKY*MIPLYE
Trigger: CTCATATAGTGGGATCATGCAATATTTGTCCTGTGA...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATTTGGTTTTCAGGTCTTaGTTGAGAGTTCTAACACCG +
Preference number: 2 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYLVFRS*LRVLTP
Trigger: CGGTGTTAGAACTCTCAACCAAGACCTGAAAACCAA...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CCA 90 bp GTTGGGTTCCGAGGCACTCTCATAGTGATGCAAACACACTTGAATTTTCCACTCTCCTGGGTACAGACTTaGTTTTCCTGTCATGGGTAT +
Preference number: 2 (lower is better)
Translates to: VGFRGTLIVMQTHLNFPLSWVQT*FSCHGY
Trigger: ATACCCATGACAGGAAAACCAAGTCTGTACCCAGGA...GAGTGGAAAATTCAAGTGTGTTTGCATCACTATGAGAGTGCCTCGGAACCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR CCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATACTTCCCCCAATAGGCTaGTTGGTGACTCTGTCTCGG +
Preference number: 2 (lower is better)
Translates to: GLERRLVTVCSSIYQYFILPPIG*LVTLSR
Trigger: CCGAGACAGAGTCACCAACCAGCCTATTGGGGGAAG...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CAA 90 bp ACTCTGAGGAGTCTGAAGACGATACAGTTTGTTATCCGATCGGTCTaGATAAGTGAGAAGTGGAAAGCCCATAGTTTGCTTACCCATCTG +
Preference number: 2 (lower is better)
Translates to: TLRSLKTIQFVIRSV*ISEKWKAHSLLTHL
Trigger: CAGATGGGTAAGCAAACTATGGGCTTTCCACTTCTCACTTATCAAGACCGATCGGATAACAAACTGTATCGTCTTCAGACTCCTCAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CAA 90 bp CCGATAGTTGGGTTCCGAGGCACTCTCATAGTGATGCAAACACACTaGAATTTTCCACTCCCAGTGTCATTACTGCACACTTTGATGTTA +
Preference number: 2 (lower is better)
Translates to: PIVGFRGTLIVMQTH*NFPLPVSLLHTLML
Trigger: TAACATCAAAGTGTGCAGTAATGACACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCACTATGAGAGTGCCTCGGAACCCAACTATCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR TCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTAGGATTAACAGGTGTGTaGCACTCACTGCCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVGLTGV*HSLPAE
Trigger: CTCAGCAGGCAGTGAGTGTCACACACCTGTTAATCC...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR TCA 90 bp TGTAGACACTTCCATGGGCAAAGCCTCGTTCCCAAGAGGCCTTATTCACAATCAAGATACGCTCATCTTTaGAAGCAAATTCAAAGGGAG +
Preference number: 2 (lower is better)
Translates to: CRHFHGQSLVPKRPYSQSRYAHL*KQIQRE
Trigger: CTCCCTTTGAATTTGCTTTCAAAGATGAGCGTATCT...TGATTGTGAATAAGGCCTCTTGGGAACGAGGCTTTGCCCATGGAAGTGTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR GCA 90 bp TCAGACACTCACTGGGAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTAAGATGCACAGCACCATaGCTGGCTTCCAAAATGGAT +
Preference number: 2 (lower is better)
Translates to: SDTHWESWDIIFKDKGGLRCTAP*LASKMD
Trigger: ATCCATTTTGGAAGCCAGGCATGGTGCTGTGCATCT...TAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTCCCAGTGAGTGTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR-3UTR CCA 90 bp GTTGGGTTCCGAGGCACTCTCATAGTGATGCAAACACACTTGAATTTTCCACTCCATAATAATCATACATaGAGGGTCTCACCAAGGGAC +
Preference number: 2 (lower is better)
Translates to: VGFRGTLIVMQTHLNFPLHNNHT*RVSPRD
Trigger: GTCCCTTGGTGAGACCCTCCATGTATGATTATTATG...GAGTGGAAAATTCAAGTGTGTTTGCATCACTATGAGAGTGCCTCGGAACCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CAA 90 bp GATATCTGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTaGCTAGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAG +
Preference number: 2 (lower is better)
Translates to: DICNSQTHRNRVEGW*LGAREMESCSTGIK
Trigger: CTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACAGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR TCA 90 bp ACGATACAGTTTGTTATCCGATCGGTCTTGATAAGTGAGAAGTGGAAAGCCCATTATACACAAACTGTGTaGCAACCTCACATACGGCAG +
Preference number: 2 (lower is better)
Translates to: TIQFVIRSVLISEKWKAHYTQTV*QPHIRQ
Trigger: CTGCCGTATGTGAGGTTGTCACACAGTTTGTGTATA...ATGGGCTTTCCACTTCTCACTTATCAAGACCGATCGGATAACAAACTGTATCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR GCA 90 bp TTACTTGAAATTTGTCTGAGACCATATGGCGTAAGCGCTGATAATAAACCACTCCCCAATGCTAAGTTCTaGACAGGCCGTACCAGTCTA +
Preference number: 2 (lower is better)
Translates to: LLEICLRPYGVSADNKPLPNAKF*TGRTSL
Trigger: TAGACTGGTACGGCCTGTGCAGAACTTAGCATTGGG...GAGTGGTTTATTATCAGCGCTTACGCCATATGGTCTCAGACAAATTTCAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR CCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACTTACCCATCTGGCATTaGTACATGTTCCGTGGACTC +
Preference number: 2 (lower is better)
Translates to: EIQKPCILGFQVLVESSNLPIWH*YMFRGL
Trigger: GAGTCCACGGAACATGTACCAATGCCAGATGGGTAA...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR TCA 90 bp TCAGACACTCACTGGGAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTAGGAAACTTGTGGAGATaGCAGGTATGTTTATTACCC +
Preference number: 2 (lower is better)
Translates to: SDTHWESWDIIFKDKGGLGNLWR*QVCLLP
Trigger: GGGTAATAAACATACCTGTCATCTCCACAAGTTTCC...TAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTCCCAGTGAGTGTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR-3UTR TCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTACATTCACTGCCCAGTTaGTATCAGCTGTCAACTTCC +
Preference number: 2 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVHSLPS*YQLSTS
Trigger: GGAAGTTGACAGCTGATATCAACTGGGCAGTGAATG...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR TCA 90 bp ATAGTGATGCAAACACACTTGAATTTTCCACTCCCAGTGTCATTACTGCACACTGCTTGGATTTCACCATaGTGGGAACATAGCCAAGAA +
Preference number: 2 (lower is better)
Translates to: IVMQTHLNFPLPVSLLHTAWISP*WEHSQE
Trigger: TTCTTGGCTATGTTCCCATCATGGTGAAATCCAAGC...AGTGTGCAGTAATGACACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR TCA 90 bp TTACTTGAAATTTGTCTGAGACCATATGGCGTAAGCGCTGATAATAAACCACTCCCAGTTCTAGCCCACTaGTGCCACTATATAACCTCT +
Preference number: 2 (lower is better)
Translates to: LLEICLRPYGVSADNKPLPVLAH*CHYITS
Trigger: AGAGGTTATATAGTGGCATCAGTGGGCTAGAACTGG...GAGTGGTTTATTATCAGCGCTTACGCCATATGGTCTCAGACAAATTTCAAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR GCA 90 bp GACTACACAGAGTACAGTTGTATTTTCTGTTGCGCATGGCAGACCAAGAAGGGGAGACTTGTCACCGTATaGTCTTCCATTTATCAATAT +
Preference number: 2 (lower is better)
Translates to: DYTEYSCIFCCAWQTKKGRLVTV*SSIYQY
Trigger: ATATTGATAAATGGAAGAGCATACGGTGACAAGTCT...CCCCTTCTTGGTCTGCCATGCGCAACAGAAAATACAACTGTACTCTGTGTAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR GCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGTGTTGTACAACATGGTaGCTGGAATTAACAATACTA +
Preference number: 2 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARCCTTW*LELTIL
Trigger: TAGTATTGTTAATTCCAGGCACCATGTTGTACAACA...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR GCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACGTGGAGAGAGTAAACTaGCACACTTCACACACACAT +
Preference number: 2 (lower is better)
Translates to: EIQKPCILGFQVLVESSNVERVN*HTSHTH
Trigger: ATGTGTGTGTGAAGTGTGGCAGTTTACTCTCTCCAC...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR CCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACATTGAACAGAATGTCTaGGACCATCCCACTCTCAGT +
Preference number: 2 (lower is better)
Translates to: EIQKPCILGFQVLVESSNIEQNV*DHPTLS
Trigger: ACTGAGAGTGGGATGGTCCCAGACATTCTGTTCAAT...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CAA 90 bp CCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTaGAGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTA +
Preference number: 2 (lower is better)
Translates to: PERFRNLAYLVFRSW*RVLTPLKNLKSNLV
Trigger: TACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
3UTR CAA 90 bp CATAGCCAGTGTAAGAAATCACAGCAACGATGGCATTGGTCCCAATaGGATAGTTATCCATGTCATAATAATCATACATGGAGGGTCTCA +
Preference number: 2 (lower is better)
Translates to: HSQCKKSQQRWHWSQ*DSYPCHNNHTWRVS
Trigger: TGAGACCCTCCATGTATGATTATTATGACATGGATAACTATCCAATTGGGACCAATGCCATCGTTGCTGTGATTTCTTACACTGGCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR TCA 90 bp CCAGCAATCCCAGTCTTGAACACTTGTCCCAGGGAAATGAAACTTATGTTTACACAGTTACCCACAGTCTaGAAATATGTGAGAACAGTA +
Preference number: 2 (lower is better)
Translates to: PAIPVLNTCPREMKLMFTQLPTV*KYVRTV
Trigger: TACTGTTCTCACATATTTTCAGACTGTGGGTAACTG...TGTAAACATAAGTTTCATTTCCCTGGGACAAGTGTTCAAGACTGGGATTGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR-3UTR CCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATTTGGTTTTCAGGTCTTaGTTGAGAGTTCTAACACCG +
Preference number: 2 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHLVFRS*LRVLTP
Trigger: CGGTGTTAGAACTCTCAACCAAGACCTGAAAACCAA...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACTTGGTTTTCAGGTCTTaGTTGAGAGTTCTAACACCG +
Preference number: 2 (lower is better)
Translates to: EIQKPCILGFQVLVESSNLVFRS*LRVLTP
Trigger: CGGTGTTAGAACTCTCAACCAAGACCTGAAAACCAA...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAAATAGACCTCAGCTGTaGGATCATTCAGTAGCCAGA +
Preference number: 2 (lower is better)
Translates to: GLERRLVTVCSSIYQYFINRPQL*DHSVAR
Trigger: TCTGGCTACTGAATGATCCCACAGCTGAGGTCTATT...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR-3UTR CCA 90 bp CCAGCAATCCCAGTCTTGAACACTTGTCCCAGGGAAATGAAACTTATGTTTACATGTATATACTATCCATaGTTTCAGACACTCACTGGG +
Preference number: 2 (lower is better)
Translates to: PAIPVLNTCPREMKLMFTCIYYP*FQTLTG
Trigger: CCCAGTGAGTGTCTGAAACCATGGATAGTATATACA...TGTAAACATAAGTTTCATTTCCCTGGGACAAGTGTTCAAGACTGGGATTGCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR-3UTR TCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACTTTCACTATGCTAAGTaGAATAAGCCAGTCACAGGA +
Preference number: 2 (lower is better)
Translates to: EIQKPCILGFQVLVESSNFHYAK*NKPVTG
Trigger: TCCTGTGACTGGCTTATTTCACTTAGCATAGTGAAA...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR TCA 90 bp CCAGCAATCCCAGTCTTGAACACTTGTCCCAGGGAAATGAAACTTATGTTTACACAGTCTGAAAATATGTaGGAACAGTACATTTTGAGG +
Preference number: 2 (lower is better)
Translates to: PAIPVLNTCPREMKLMFTQSENM*EQYILR
Trigger: CCTCAAAATGTACTGTTCTCACATATTTTCAGACTG...TGTAAACATAAGTTTCATTTCCCTGGGACAAGTGTTCAAGACTGGGATTGCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR-3UTR TCA 90 bp ATAGTGATGCAAACACACTTGAATTTTCCACTCCCAGTGTCATTACTGCACACTACAATCCTTAACATCTaGGAAACAGAGTTCCTAAGG +
Preference number: 2 (lower is better)
Translates to: IVMQTHLNFPLPVSLLHTTILNI*ETEFLR
Trigger: CCTTAGGAACTCTGTTTCTCAGATGTTAAGGATTGT...AGTGTGCAGTAATGACACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR CCA 90 bp TTACTTGAAATTTGTCTGAGACCATATGGCGTAAGCGCTGATAATAAACCACTCTTGGTTTTCAGGTCTTaGTTGAGAGTTCTAACACCG +
Preference number: 2 (lower is better)
Translates to: LLEICLRPYGVSADNKPLLVFRS*LRVLTP
Trigger: CGGTGTTAGAACTCTCAACCAAGACCTGAAAACCAA...GAGTGGTTTATTATCAGCGCTTACGCCATATGGTCTCAGACAAATTTCAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR CCA 90 bp TCTGATAGTCCTCTTAATCCAAAAGGTCAACATCAAGTTAAACAACATCCAGTTCGCAGCTTGCTCATTTaGGTACCAGTCAGGAACATT +
Preference number: 2 (lower is better)
Translates to: SDSPLNPKGQHQVKQHPVRSLLI*VPVRNI
Trigger: AATGTTCCTGACTGGTACCCAAATGAGCAAGCTGCG...AACTGGATGTTGTTTAACTTGATGTTGACCTTTTGGATTAAGAGGACTATCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CAA 90 bp ATAAGAAATAGTGGGCTGGTCCAAGTGCAATGGTGTTGCAACAAATaGATCACAACCACTTACAGATTTATTTGTTCTTTTTCCACTCCC +
Preference number: 2 (lower is better)
Translates to: IRNSGLVQVQWCCNK*ITTTYRFICSFSTP
Trigger: GGGAGTGGAAAAAGAACAAATAAATCTGTAAGTGGTTGTGATCAATTTGTTGCAACACCATTGCACTTGGACCAGCCCACTATTTCTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR-3UTR GCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACTCACAGGACAAATATTaGATGATCCCACTATATGAG +
Preference number: 2 (lower is better)
Translates to: EIQKPCILGFQVLVESSNSQDKY*MIPLYE
Trigger: CTCATATAGTGGGATCATGCAATATTTGTCCTGTGA...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CCA 90 bp GAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTATTATACCTGATTGTTCTGTCCTGCTCAAGATaGATTAACAGGTGTGTGACA +
Preference number: 2 (lower is better)
Translates to: ESWDIIFKDKGGLLYLIVLSCSR*INRCVT
Trigger: TGTCACACACCTGTTAATCCATCTTGAGCAGGACAG...AACAATCAGGTATAATAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR-3UTR CCA 90 bp AAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGCCATTGATTGTAATCCCAATATTTaGGAGACCGAGAGAGGAGGA +
Preference number: 2 (lower is better)
Translates to: KISPRHNQHSDDFFNAIDCNPNI*ETERGG
Trigger: TCCTCCTCTCTCGGTCTCCCAAATATTGGGATTACA...ATCAATGGCATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR CCA 90 bp ATAGTGATGCAAACACACTTGAATTTTCCACTCCCAGTGTCATTACTGCACACTTCTGGTTTTCCATTTTaGTCTTATCATTGCAATGGG +
Preference number: 2 (lower is better)
Translates to: IVMQTHLNFPLPVSLLHTSGFPF*SYHCNG
Trigger: CCCATTGCAATGATAAGACCAAAATGGAAAACCAGA...AGTGTGCAGTAATGACACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR TCA 90 bp TCTGATAGTCCTCTTAATCCAAAAGGTCAACATCAAGTTAAACAACATCCAGTTGAAACACTGGTCTTCTaGGCCTTCTTATCAAAAGCT +
Preference number: 2 (lower is better)
Translates to: SDSPLNPKGQHQVKQHPVETLVF*AFLSKA
Trigger: AGCTTTTGATAAGAAGGCTCAGAAGACCAGTGTTTC...AACTGGATGTTGTTTAACTTGATGTTGACCTTTTGGATTAAGAGGACTATCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR GCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGACTTGTCACCGTATaGTCTTCCATTTATCAATAT +
Preference number: 2 (lower is better)
Translates to: EIQKPCILGFQVLVESSNRLVTV*SSIYQY
Trigger: ATATTGATAAATGGAAGAGCATACGGTGACAAGTCT...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR GCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACTGTTGTACAACATGGTaGCTGGAATTAACAATACTA +
Preference number: 2 (lower is better)
Translates to: EIQKPCILGFQVLVESSNCCTTW*LELTIL
Trigger: TAGTATTGTTAATTCCAGGCACCATGTTGTACAACA...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR CAA 90 bp CTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACACCGTaGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCATTGAAT +
Preference number: 2 (lower is better)
Translates to: LAYLVFRSWLRVLTP*KNLKSNLVMISSLN
Trigger: ATTCAATGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR GCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTAAGACTTGTCACCGTATaGTCTTCCATTTATCAATAT +
Preference number: 2 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVRLVTV*SSIYQY
Trigger: ATATTGATAAATGGAAGAGCATACGGTGACAAGTCT...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR GCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATATGTTGTACAACATGGTaGCTGGAATTAACAATACTA +
Preference number: 2 (lower is better)
Translates to: GLERRLVTVCSSIYQYFICCTTW*LELTIL
Trigger: TAGTATTGTTAATTCCAGGCACCATGTTGTACAACA...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR GCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGAGACTTGTCACCGTATaGTCTTCCATTTATCAATAT +
Preference number: 2 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWRLVTV*SSIYQY
Trigger: ATATTGATAAATGGAAGAGCATACGGTGACAAGTCT...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
3UTR TCA 72 bp GACACCGTCCAGCAGGACAGGGTAGCACTCACTGTATaGTCGGTGGGGAGCTCCATCAATGGGAGTGACCCC +
Preference number: 3 (lower is better)
Translates to: DTVQQDRVALTV*SVGSSINGSDP
Trigger: GGGGTCACTCCCATTGATGGAGCTCCCCACCGATCATACAGTGAGTGCTACCCTGTCCTGCTGGACGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CCA 72 bp CTGGCAGCAGCCTGCGTACTGTGGTGGTCCTCATCTTaGCAAAATCAGCCCCTCTGTGCACGCAGCGGAAAT +
Preference number: 3 (lower is better)
Translates to: LAAACVLWWSSS*QNQPLCARSGN
Trigger: ATTTCCGCTGCGTGCACAGAGGGGCTGATTTTGCCAAGATGAGGACCACCACAGTACGCAGGCTGCTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR GCA 72 bp CTTCCCACGGTAGGTACTCCTTCGGCCCCGGCATTCTaGTGGATAAACATTGGCCTCTTTGCAGATGGTCCC +
Preference number: 3 (lower is better)
Translates to: LPTVGTPSAPAF*WINIGLFADGP
Trigger: GGGACCATCTGCAAAGAGGCCAATGTTTATCCAGCAGAATGCCGGGGCCGAAGGAGTACCTACCGTGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CCA 72 bp CCCACGGTAGGTACTCCTTCGGCCCCGGCATTCTGCTaGATAAACATTGGCCTCTTTGCAGATGGTCCCTTT +
Preference number: 3 (lower is better)
Translates to: PTVGTPSAPAFC*INIGLFADGPF
Trigger: AAAGGGACCATCTGCAAAGAGGCCAATGTTTATCCAGCAGAATGCCGGGGCCGAAGGAGTACCTACCGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CCA 72 bp CGGATTCCACCCTGGACATTTCTTCCCCCAATAGGCTaGTTGGTGACTCTGTCTCGGGCTCCAGTTGTCCTT +
Preference number: 3 (lower is better)
Translates to: RIPPWTFLPPIG*LVTLSRAPVVL
Trigger: AAGGACAACTGGAGCCCGAGACAGAGTCACCAACCAGCCTATTGGGGGAAGAAATGTCCAGGGTGGAATCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR CAA 90 bp GCAGTTAGGTGGTTCATCAGGCCACAGGGCTCCCCGTCTGGGGTATGCACGGGACAGCTTGCATTCTATTaGTATAGTACTGTCCTGCTC +
Preference number: 3 (lower is better)
Translates to: AVRWFIRPQGSPSGVCTGQLAFY*YSTVLL
Trigger: GAGCAGGACAGTACTATACAAATAGAATGCAAGCTG...TCCCGTGCATACCCCAGACGGGGAGCCCTGTGGCCTGATGAACCACCTAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR CAA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCAGGGTAGAAGGGTGGTaGCTAGGGGCCAGGGAAATG +
Preference number: 3 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSRVEGW*LGAREM
Trigger: CATTTCCCTGGCCCCTAGCAACCACCCTTCTACCCT...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTAGGGTAGAAGGGTGGTaGCTAGGGGCCAGGGAAATG +
Preference number: 3 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIRVEGW*LGAREM
Trigger: CATTTCCCTGGCCCCTAGCAACCACCCTTCTACCCT...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR CCA 72 bp GAGTTCTCCTCTGAGAAGATGAAGGGTGTAGCATCATaGCAGAGACCATGCAAAGCTGCAGACTTCCCGGCC +
Preference number: 3 (lower is better)
Translates to: EFSSEKMKGVAS*QRPCKAADFPA
Trigger: GGCCGGGAAGTCTGCAGCTTTGCATGGTCTCTGCCATGATGCTACACCCTTCATCTTCTCAGAGGAGAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CCA 72 bp AGTGGAGAGAGTAAACTGCCACACTTCACACACACATaGGCTACCGACCGATCTGAGCAGTTGAAGAGGCGG +
Preference number: 3 (lower is better)
Translates to: SGESKLPHFTHT*ATDRSEQLKRR
Trigger: CCGCCTCTTCAACTGCTCAGATCGGTCGGTAGCCCATGTGTGTGTGAAGTGTGGCAGTTTACTCTCTCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR CAA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTGTTTTCAGGTCTTGGTaGAGAGTTCTAACACCGTTG +
Preference number: 3 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVVFRSW*RVLTPL
Trigger: CAACGGTGTTAGAACTCTCAACCAAGACCTGAAAAC...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
3UTR TCA 72 bp CTCTGTGCACGCAGCGGAAATGGGAGAGGTAGCGTATaGAGTTCAGCTTGTCAGCCACAACACAAAGTCCAG +
Preference number: 3 (lower is better)
Translates to: LCARSGNGRGSV*SSACQPQHKVQ
Trigger: CTGGACTTTGTGTTGTGGCTGACAAGCTGAACTTCATACGCTACCTCTCCCATTTCCGCTGCGTGCACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR CAA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCGGTTGGAAAGGAGACTaGTCACCGTATGCTCTTCCA +
Preference number: 3 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSGWKGD*SPYALP
Trigger: TGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACC...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTTACCCAGGCTGTCCTaGAACTCCTGCACTCAAATG +
Preference number: 3 (lower is better)
Translates to: GVGNLGLERRLVTVCSSILPRLS*NSCTQM
Trigger: CATTTGAGTGCAGGAGTTCAAGGACAGCCTGGGTAA...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR GCA 72 bp CACTGCGACTACACAGAGTACAGTTGTATTTTCTGTTaGGCATGGCAGACCAAGAAGGGGGTGGCTTCTCCA +
Preference number: 3 (lower is better)
Translates to: HCDYTEYSCIFC*AWQTKKGVASP
Trigger: TGGAGAAGCCACCCCCTTCTTGGTCTGCCATGCGCAACAGAAAATACAACTGTACTCTGTGTAGTCGCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CCA 72 bp GCCGGCCACAATCTGCTTAAAATGCCCTTCTGCCCATaGCGACTGGCAAATTTATCTCCGATAGTTGGGTTC +
Preference number: 3 (lower is better)
Translates to: AGHNLLKMPFCP*RLANLSPIVGF
Trigger: GAACCCAACTATCGGAGATAAATTTGCCAGTCGCCATGGGCAGAAGGGCATTTTAAGCAGATTGTGGCCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR GCA 72 bp GCTCCTATAAACGGCAATCCATCGTCATCTAACTTCTaGAGAACGCGTGGGTCACCAGGTTTGATGCCAAAC +
Preference number: 3 (lower is better)
Translates to: APINGNPSSSNF*RTRGSPGLMPN
Trigger: GTTTGGCATCAAACCTGGTGACCCACGCGTTCTGCAGAAGTTAGATGACGATGGATTGCCGTTTATAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR GCA 72 bp TCCTCAGCCGGCCACAATCTGCTTAAAATGCCCTTCTaGCCATGGCGACTGGCAAATTTATCTCCGATAGTT +
Preference number: 3 (lower is better)
Translates to: SSAGHNLLKMPF*PWRLANLSPIV
Trigger: AACTATCGGAGATAAATTTGCCAGTCGCCATGGGCAGAAGGGCATTTTAAGCAGATTGTGGCCGGCTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CCA 72 bp CTGCCCATGGCGACTGGCAAATTTATCTCCGATAGTTaGGTTCCGAGGCACTCTCATAGTGATGCAAACACA +
Preference number: 3 (lower is better)
Translates to: LPMATGKFISDS*VPRHSHSDANT
Trigger: TGTGTTTGCATCACTATGAGAGTGCCTCGGAACCCAACTATCGGAGATAAATTTGCCAGTCGCCATGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR CAA 90 bp AGACCATGCAAAGCTGCAGACTTCCCGGCCATACTCTCAATTAACATCCCAATGGGTTGGAAAGGAGACTaGTCACCGTATGCTCTTCCA +
Preference number: 3 (lower is better)
Translates to: RPCKAADFPAILSINIPMGWKGD*SPYALP
Trigger: TGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACC...CATTGGGATGTTAATTGAGAGTATGGCCGGGAAGTCTGCAGCTTTGCATGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR GCA 72 bp CTTCCTGGTTCACCAAACTATCAGGATTGTCCTCCATaGACTCTCCTTTGGCTAAAGCAAAGAGCTTTCGCG +
Preference number: 3 (lower is better)
Translates to: LPGSPNYQDCPP*TLLWLKQRAFA
Trigger: CGCGAAAGCTCTTTGCTTTAGCCAAAGGAGAGTGCATGGAGGACAATCCTGATAGTTTGGTGAACCAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CCA 72 bp GGGGACAGAGGTAGAGATGGCTATAAAAGGATAGTATaGCAGAGCTCTGTGATGACGGAACAGCTCTGTATC +
Preference number: 3 (lower is better)
Translates to: GDRGRDGYKRIV*QSSVMTEQLCI
Trigger: GATACAGAGCTGTTCCGTCATCACAGAGCTCTGCCATACTATCCTTTTATAGCCATCTCTACCTCTGTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR CCA 72 bp CAACACCTTAAAATGACGAAGAGAATCTGCGATGCCTaGAGCAAGATCCTTATCCACCCAGCCAACCATGAC +
Preference number: 3 (lower is better)
Translates to: QHLKMTKRICDA*SKILIHPANHD
Trigger: GTCATGGTTGGCTGGGTGGATAAGGATCTTGCTCCAGGCATCGCAGATTCTCTTCGTCATTTTAAGGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CCA 72 bp GCAATCACACTCAGCAGGCTGTGTGGAAAGAGTTCCTaGTGTGTGGTAACTCCAGCAAAAACTTCATCCTCA +
Preference number: 3 (lower is better)
Translates to: AITLSRLCGKSS*CVVTPAKTSSS
Trigger: TGAGGATGAAGTTTTTGCTGGAGTTACCACACACCAGGAACTCTTTCCACACAGCCTGCTGAGTGTGATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CCA 72 bp ATTAACATCCCAATGGTCATGCGGGATGGAAAACCATaGGGATTGAACAGAATGTCTGGGACCATCCCACTC +
Preference number: 3 (lower is better)
Translates to: INIPMVMRDGKP*GLNRMSGTIPL
Trigger: GAGTGGGATGGTCCCAGACATTCTGTTCAATCCCCATGGTTTTCCATCCCGCATGACCATTGGGATGTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR CAA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCAGAAACCTTGCATACTaGGTTTTCAGGTCTTGGTTG +
Preference number: 3 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSRNLAY*VFRSWL
Trigger: CAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCT...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTAGAAACCTTGCATACTaGGTTTTCAGGTCTTGGTTG +
Preference number: 3 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIRNLAY*VFRSWL
Trigger: CAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCT...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTCAGCTTGCATTCTATTaGTATAGTACTGTCCTGCTC +
Preference number: 3 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIQLAFY*YSTVLL
Trigger: GAGCAGGACAGTACTATACAAATAGAATGCAAGCTG...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp TCTGTGCACGCAGCGGAAATGGGAGAGGTAGCGTATGAAGTTCAGCTTGTCAGCAAACACTGTACCTGTTaGTTTTTACTTCAACGTGGC +
Preference number: 3 (lower is better)
Translates to: SVHAAEMGEVAYEVQLVSKHCTC*FLLQRG
Trigger: GCCACGTTGAAGTAAAAACAAACAGGTACAGTGTTT...GCTGACAAGCTGAACTTCATACGCTACCTCTCCCATTTCCGCTGCGTGCACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR CAA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGTCTAAAGATCTGTaGTACAACATGGTGCCTGGA +
Preference number: 3 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPRSKDL*YNMVPG
Trigger: TCCAGGCACCATGTTGTACAACAGATCTTTAGACCT...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAGCTCTGTTGCCCAGGTaGCTGTGCAGTGGCGTGATC +
Preference number: 3 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIALLPR*LCSGVI
Trigger: GATCACGCCACTGCACAGCAACCTGGGCAACAGAGC...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR-3UTR CAA 90 bp GTTGGGTTCCGAGGCACTCTCATAGTGATGCAAACACACTTGAATTTTCCACTCGAGAAAGGGATGAAGTaGGCAATCACACTCAGCAGG +
Preference number: 3 (lower is better)
Translates to: VGFRGTLIVMQTHLNFPLEKGMK*AITLSR
Trigger: CCTGCTGAGTGTGATTGCCAACTTCATCCCTTTCTC...GAGTGGAAAATTCAAGTGTGTTTGCATCACTATGAGAGTGCCTCGGAACCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR CAA 90 bp AATGTTCTTCCCTCACACAGTGCATTGAAACTCCATACTGAGTATAACCAGGCCGGTTGGAAAGGAGACTaGTCACCGTATGCTCTTCCA +
Preference number: 3 (lower is better)
Translates to: NVLPSHSALKLHTEYNQAGWKGD*SPYALP
Trigger: TGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACC...GGCCTGGTTATACTCAGTATGGAGTTTCAATGCACTGTGTGAGGGAAGAACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR CAA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCCAGCTTGCATTCTATTaGTATAGTACTGTCCTGCTC +
Preference number: 3 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPQLAFY*YSTVLL
Trigger: GAGCAGGACAGTACTATACAAATAGAATGCAAGCTG...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCAAACACTGTACCTGTTaGTTTTTACTTCAACGTGGC +
Preference number: 3 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSKHCTC*FLLQRG
Trigger: GCCACGTTGAAGTAAAAACAAACAGGTACAGTGTTT...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTAAACACTGTACCTGTTaGTTTTTACTTCAACGTGGC +
Preference number: 3 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIKHCTC*FLLQRG
Trigger: GCCACGTTGAAGTAAAAACAAACAGGTACAGTGTTT...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGAGGTCTAAAGATCTGTaGTACAACATGGTGCCTGGA +
Preference number: 3 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARRSKDL*YNMVPG
Trigger: TCCAGGCACCATGTTGTACAACAGATCTTTAGACCT...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp GTAGCTGTAATACGGATCTCCGTACTGCAGTTTTGCTCCTATAAACGGCAATCCCCATTCACTGCCCAGTaGATATCAGCTGTCAACTTC +
Preference number: 3 (lower is better)
Translates to: VAVIRISVLQFCSYKRQSPFTAQ*ISAVNF
Trigger: GAAGTTGACAGCTGATATCAACTGGGCAGTGAATGG...GGATTGCCGTTTATAGGAGCAAAACTGCAGTACGGAGATCCGTATTACAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR CAA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACCAGGAACTCCGCAGCTaGCTCATTTGGGTACCAGTC +
Preference number: 3 (lower is better)
Translates to: EIQKPCILGFQVLVESSNQELRS*LIWVPV
Trigger: GACTGGTACCCAAATGAGCAAGCTGCGGAGTTCCTG...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR TCA 72 bp ATCTGGCATTGGTACATGTTCCGTGGACTCTGGTTGTaGTCAGAGAAAGGGATGAAGTTGGCAATCACACTC +
Preference number: 3 (lower is better)
Translates to: IWHWYMFRGLWL*SEKGMKLAITL
Trigger: GAGTGTGATTGCCAACTTCATCCCTTTCTCTGATCACAACCAGAGTCCACGGAACATGTACCAATGCCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR GCA 72 bp TTTCTCTCTCAACACCTTAAAATGACGAAGAGAATCTaGGATGCCTGGAGCAAGATCCTTATCCACCCAGCC +
Preference number: 3 (lower is better)
Translates to: FLSQHLKMTKRI*DAWSKILIHPA
Trigger: GGCTGGGTGGATAAGGATCTTGCTCCAGGCATCGCAGATTCTCTTCGTCATTTTAAGGTGTTGAGAGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR CAA 90 bp GGAAAACCATGGGGATTGAACAGAATGTCTGGGACCATCCCACTCTCAGTAAAAGTTTTCAGGTCTTGGTaGAGAGTTCTAACACCGTTG +
Preference number: 3 (lower is better)
Translates to: GKPWGLNRMSGTIPLSVKVFRSW*RVLTPL
Trigger: CAACGGTGTTAGAACTCTCAACCAAGACCTGAAAAC...TTTTACTGAGAGTGGGATGGTCCCAGACATTCTGTTCAATCCCCATGGTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR CAA 90 bp TTACTTGAAATTTGTCTGAGACCATATGGCGTAAGCGCTGATAATAAACCACTCCGTGGGTCACCAGGTTaGATGCCAAACACCAGGCTA +
Preference number: 3 (lower is better)
Translates to: LLEICLRPYGVSADNKPLRGSPG*MPNTRL
Trigger: TAGCCTGGTGTTTGGCATCAAACCTGGTGACCCACG...GAGTGGTTTATTATCAGCGCTTACGCCATATGGTCTCAGACAAATTTCAAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CCA 72 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTaGTTGCTAGGGGCCAGGGAAATGGAGAGTTGTTCA +
Preference number: 3 (lower is better)
Translates to: CNSQTHRNRVEG*LLGAREMESCS
Trigger: TGAACAACTCTCCATTTCCCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR CCA 72 bp GCACTGGTTAAACAGGAACTCCGCAGCTTGCTCATTTaGGTACCAGTCAGGAACATTGAGTTTTACTCTGAA +
Preference number: 3 (lower is better)
Translates to: ALVKQELRSLLI*VPVRNIEFYSE
Trigger: TTCAGAGTAAAACTCAATGTTCCTGACTGGTACCCAAATGAGCAAGCTGCGGAGTTCCTGTTTAACCAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CCA 72 bp AGTTTGCTTACCCATCTGGCATTGGTACATGTTCCGTaGACTCTGGTTGTGATCAGAGAAAGGGATGAAGTT +
Preference number: 3 (lower is better)
Translates to: SLLTHLALVHVP*TLVVIRERDEV
Trigger: AACTTCATCCCTTTCTCTGATCACAACCAGAGTCCACGGAACATGTACCAATGCCAGATGGGTAAGCAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR CAA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTGGTTGGAAAGGAGACTaGTCACCGTATGCTCTTCCA +
Preference number: 3 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTGWKGD*SPYALP
Trigger: TGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACC...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACGGTTGGAAAGGAGACTaGTCACCGTATGCTCTTCCA +
Preference number: 3 (lower is better)
Translates to: EIQKPCILGFQVLVESSNGWKGD*SPYALP
Trigger: TGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACC...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGAAACACTGTACCTGTTaGTTTTTACTTCAACGTGGC +
Preference number: 3 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARKHCTC*FLLQRG
Trigger: GCCACGTTGAAGTAAAAACAAACAGGTACAGTGTTT...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAAAGGTCTAAAGATCTGTaGTACAACATGGTGCCTGGA +
Preference number: 3 (lower is better)
Translates to: RGQGNGELFNRYKASVMQRSKDL*YNMVPG
Trigger: TCCAGGCACCATGTTGTACAACAGATCTTTAGACCT...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp TCAGACACTCACTGGGAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTATTGCCCAGATTGGACTaGAATTCCTGGGTTCAAGCA +
Preference number: 3 (lower is better)
Translates to: SDTHWESWDIIFKDKGGLLPRLD*NSWVQA
Trigger: TGCTTGAACCCAGGAATTCAAGTCCAATCTGGGCAA...TAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTCCCAGTGAGTGTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR-3UTR CAA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACTGGGGTTTCCCCATGTaGCCCAGATTGGACTTGAAT +
Preference number: 3 (lower is better)
Translates to: EIQKPCILGFQVLVESSNWGFPM*PRLDLN
Trigger: ATTCAAGTCCAATCTGGGCAACATGGGGAAACCCCA...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR-3UTR CAA 90 bp TGTAAGAAATCACAGCAACGATGGCATTGGTCCCAATTGGATAGTTATCCATGTCTTACCCATCTGGCATaGGTACATGTTCCGTGGACT +
Preference number: 3 (lower is better)
Translates to: CKKSQQRWHWSQLDSYPCLTHLA*VHVPWT
Trigger: AGTCCACGGAACATGTACCAATGCCAGATGGGTAAG...ACATGGATAACTATCCAATTGGGACCAATGCCATCGTTGCTGTGATTTCTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR CAA 90 bp GTTGGGTTCCGAGGCACTCTCATAGTGATGCAAACACACTTGAATTTTCCACTCTGGCATTGGTCCCAATaGGATAGTTATCCATGTCAT +
Preference number: 3 (lower is better)
Translates to: VGFRGTLIVMQTHLNFPLWHWSQ*DSYPCH
Trigger: ATGACATGGATAACTATCCAATTGGGACCAATGCCA...GAGTGGAAAATTCAAGTGTGTTTGCATCACTATGAGAGTGCCTCGGAACCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR GCA 72 bp ATACAGATGCACTGGTTAAACAGGAACTCCGCAGCTTaGTCATTTGGGTACCAGTCAGGAACATTGAGTTTT +
Preference number: 3 (lower is better)
Translates to: IQMHWLNRNSAA*SFGYQSGTLSF
Trigger: AAAACTCAATGTTCCTGACTGGTACCCAAATGAGCAAGCTGCGGAGTTCCTGTTTAACCAGTGCATCTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CCA 72 bp TGGATAAACATTGGCCTCTTTGCAGATGGTCCCTTTTaGAACTGTAGGTGGACTGATAACAGCATCCAGAAT +
Preference number: 3 (lower is better)
Translates to: WINIGLFADGPF*NCRWTDNSIQN
Trigger: ATTCTGGATGCTGTTATCAGTCCACCTACAGTTCCAAAAGGGACCATCTGCAAAGAGGCCAATGTTTATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CCA 72 bp AGGAGTGGTAAAAAGGAACAATCCTGGGTACAGACTTaGTTTTCCTGTCATGGGTATAAGGACCACTTCCAT +
Preference number: 3 (lower is better)
Translates to: RSGKKEQSWVQT*FSCHGYKDHFH
Trigger: ATGGAAGTGGTCCTTATACCCATGACAGGAAAACCAAGTCTGTACCCAGGATTGTTCCTTTTTACCACTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CCA 72 bp CAGTTTGTTATCCGATCGGTCTTGATAAGTGAGAAGTaGAAAGCCCATAGTTTGCTTACCCATCTGGCATTG +
Preference number: 3 (lower is better)
Translates to: QFVIRSVLISEK*KAHSLLTHLAL
Trigger: CAATGCCAGATGGGTAAGCAAACTATGGGCTTTCCACTTCTCACTTATCAAGACCGATCGGATAACAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR CAA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAACAGCTTGCATTCTATTaGTATAGTACTGTCCTGCTC +
Preference number: 3 (lower is better)
Translates to: RGQGNGELFNRYKASVMQQLAFY*YSTVLL
Trigger: GAGCAGGACAGTACTATACAAATAGAATGCAAGCTG...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR TCA 72 bp CATGCAACTACCTGGATGTATCTCAAGGGAATGGAGTaGAAAGGCCATTCTCAAAGGTTATACTTCGTGATC +
Preference number: 3 (lower is better)
Translates to: HATTWMYLKGME*KGHSQRLYFVI
Trigger: GATCACGAAGTATAACCTTTGAGAATGGCCTTTTCACTCCATTCCCTTGAGATACATCCAGGTAGTTGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR GCA 72 bp CTCTCAAATAGCAGGGACTATAGATGCACAGCACCATaGCTGGCTTCCAAAATGGATGAATCTTATTTCACT +
Preference number: 3 (lower is better)
Translates to: LSNSRDYRCTAP*LASKMDESYFT
Trigger: AGTGAAATAAGATTCATCCATTTTGGAAGCCAGGCATGGTGCTGTGCATCTATAGTCCCTGCTATTTGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR CCA 72 bp CAAATAGCAGGGACTATAGATGCACAGCACCATGCCTaGCTTCCAAAATGGATGAATCTTATTTCACTATGC +
Preference number: 3 (lower is better)
Translates to: QIAGTIDAQHHA*LPKWMNLISLC
Trigger: GCATAGTGAAATAAGATTCATCCATTTTGGAAGCCAGGCATGGTGCTGTGCATCTATAGTCCCTGCTATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATGTTTTCAGGTCTTGGTaGAGAGTTCTAACACCGTTG +
Preference number: 3 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHVFRSW*RVLTPL
Trigger: CAACGGTGTTAGAACTCTCAACCAAGACCTGAAAAC...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAACCAAACTATCAGGATaGTCCTCCATGCACTCTCCT +
Preference number: 3 (lower is better)
Translates to: GLERRLVTVCSSIYQYFITKLSG*SSMHSP
Trigger: AGGAGAGTGCATGGAGGACAATCCTGATAGTTTGGT...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR CAA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTAGTTTTCAGGTCTTGGTaGAGAGTTCTAACACCGTTG +
Preference number: 3 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVVFRSW*RVLTPL
Trigger: CAACGGTGTTAGAACTCTCAACCAAGACCTGAAAAC...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAGTTTTCAGGTCTTGGTaGAGAGTTCTAACACCGTTG +
Preference number: 3 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIVFRSW*RVLTPL
Trigger: CAACGGTGTTAGAACTCTCAACCAAGACCTGAAAAC...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTAGAAACCTTGCATACTaGGTTTTCAGGTCTTGGTTG +
Preference number: 3 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTRNLAY*VFRSWL
Trigger: CAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCT...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp GAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTATTATACCTGATTGTTCCCATGTTGCCCAGATaGGACTTGAATTCCTGGGTT +
Preference number: 3 (lower is better)
Translates to: ESWDIIFKDKGGLLYLIVPMLPR*DLNSWV
Trigger: AACCCAGGAATTCAAGTCCAATCTGGGCAACATGGG...AACAATCAGGTATAATAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR-3UTR CAA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAGGAAGGTTACGTAAGTaGCAAAGCTTGGATTTCACC +
Preference number: 3 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIGRLRK*QSLDFT
Trigger: GGTGAAATCCAAGCTTTGCAACTTACGTAACCTTCC...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR-3UTR CAA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTAAGAAACCTTGCATACTaGGTTTTCAGGTCTTGGTTG +
Preference number: 3 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVRNLAY*VFRSWL
Trigger: CAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCT...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTACAGCTTGCATTCTATTaGTATAGTACTGTCCTGCTC +
Preference number: 3 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVQLAFY*YSTVLL
Trigger: GAGCAGGACAGTACTATACAAATAGAATGCAAGCTG...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
3UTR-3UTR CAA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATACTACACAGAGTACAGTaGTATTTTCTGTTGCGCATG +
Preference number: 3 (lower is better)
Translates to: GLERRLVTVCSSIYQYFILHRVQ*YFLLRM
Trigger: CATGCGCAACAGAAAATACAACTGTACTCTGTGTAG...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR TCA 72 bp GTCGAACAACCCTCTTCCATTACAATCCTTAACATCTaGGAAACAGAGTTCCTAAGGAAAGAATCATCCTCT +
Preference number: 3 (lower is better)
Translates to: VEQPSSITILNI*ETEFLRKESSS
Trigger: AGAGGATGATTCTTTCCTTAGGAACTCTGTTTCTCAGATGTTAAGGATTGTAATGGAAGAGGGTTGTTCGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000430293.1
3UTR GCA 72 bp CATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTaGTCAAGATGGATTAACAGGTGTGTGACACTCACT +
Preference number: 3 (lower is better)
Translates to: HYSLHSICIVLS*SRWINRCVTLT
Trigger: AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
3UTR CCA 72 bp GCTAAAATAAGAAATAGTGGGCTGGTCCAAGTGCAATaGTGTTGCAACAAATTGATCACAACCACTTACAGA +
Preference number: 3 (lower is better)
Translates to: AKIRNSGLVQVQ*CCNKLITTTYR
Trigger: TCTGTAAGTGGTTGTGATCAATTTGTTGCAACACCATTGCACTTGGACCAGCCCACTATTTCTTATTTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR-3UTR CAA 90 bp CTCCCAGTGTCATTACTGCACACTTTGATGTTATCCACAACACAATTTTCTTTAAGAAACCTTGCATACTaGGTTTTCAGGTCTTGGTTG +
Preference number: 3 (lower is better)
Translates to: LPVSLLHTLMLSTTQFSLRNLAY*VFRSWL
Trigger: CAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCT...TAAAGAAAATTGTGTTGTGGATAACATCAAAGTGTGCAGTAATGACACTGGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR-3UTR CAA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTAAAACACTGTACCTGTTaGTTTTTACTTCAACGTGGC +
Preference number: 3 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVKHCTC*FLLQRG
Trigger: GCCACGTTGAAGTAAAAACAAACAGGTACAGTGTTT...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
3UTR CCA 72 bp ATACTATCCATGGTTTCAGACACTCACTGGGAGTCTTaGGATATAATCTTCAAAGATAAAGGGGGACTATTA +
Preference number: 3 (lower is better)
Translates to: ILSMVSDTHWES*DIIFKDKGGLL
Trigger: TAATAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTCCCAGTGAGTGTCTGAAACCATGGATAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR-3UTR CAA 90 bp ATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGCCATTGATTATAGAAACCTTGCATACTaGGTTTTCAGGTCTTGGTTG +
Preference number: 3 (lower is better)
Translates to: ISPRHNQHSDDFFNAIDYRNLAY*VFRSWL
Trigger: CAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCT...ATAATCAATGGCATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR TCA 72 bp CCAGTCACAGGACAAATATTGCATGATCCCACTATATaGGATATCTGTAATAGTCAAACTCATAGAAACAGG +
Preference number: 3 (lower is better)
Translates to: PVTGQILHDPTI*DICNSQTHRNR
Trigger: CCTGTTTCTATGAGTTTGACTATTACAGATATCTCATATAGTGGGATCATGCAATATTTGTCCTGTGACTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR GCA 72 bp ATAAGAAATAGTGGGCTGGTCCAAGTGCAATGGTGTTaGAACAAATTGATCACAACCACTTACAGATTTATT +
Preference number: 3 (lower is better)
Translates to: IRNSGLVQVQWC*NKLITTTYRFI
Trigger: AATAAATCTGTAAGTGGTTGTGATCAATTTGTTGCAACACCATTGCACTTGGACCAGCCCACTATTTCTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR GCA 72 bp TTAAACAACATCCAGTTTCACTTTGATGTTCATAGCTaGCAGTTCAGCTACAAAATACCGAAAAACATAAGG +
Preference number: 3 (lower is better)
Translates to: LNNIQFHFDVHS*QFSYKIPKNIR
Trigger: CCTTATGTTTTTCGGTATTTTGTAGCTGAACTGGCAGCTATGAACATCAAAGTGAAACTGGATGTTGTTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CCA 72 bp ATGAATCACTTATACATTGCTGGTAGGAATGTAAAATaGCACAGCCACTCTGAAAAGTTTGGCAGTTTATTA +
Preference number: 3 (lower is better)
Translates to: MNHLYIAGRNVK*HSHSEKFGSLL
Trigger: TAATAAACTGCCAAACTTTTCAGAGTGGCTGTGCCATTTTACATTCCTACCAGCAATGTATAAGTGATTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR TCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTCGCTCCCCGCCCAGTTaGGCATGTGACCTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVRSPPS*ACDLFG
Trigger: GCCAAAGAGGTCACATGCTCAACTGGGCGGGGAGCG...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537335.5
CDS-3UTR GCA 90 bp TCTGCCTCCTCATGGTGCTCAATGAGGGCTTGTGGGGGAAGGTTACGTAAGTTGGGGAGACCCCGTCTCTaGACCGCGAGGCCGAGACCC +
Preference number: 4 (lower is better)
Translates to: SASSWCSMRACGGRLRKLGRPRL*TARPRP
Trigger: GGGTCTCGGCCTCGCGGTGCAGAGACGGGGTCTCCC...CAACTTACGTAACCTTCCCCCACAAGCCCTCATTGAGCACCATGAGGAGGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTGAAAGATGCCGCAGGTaGAAACCCGCTCCCCGCCCA +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVERCRR*KPAPRP
Trigger: TGGGCGGGGAGCGGGTTTCCACCTGCGGCATCTTTC...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537335.5
CDS-3UTR TCA 90 bp GCAGTTAGGTGGTTCATCAGGCCACAGGGCTCCCCGTCTGGGGTATGCACGGGAGGCCGAGTTCTCCTCTaGGAAGATGAAGGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: AVRWFIRPQGSPSGVCTGGRVLL*EDEGCS
Trigger: GCTACACCCTTCATCTTCTCAGAGGAGAACTCGGCC...TCCCGTGCATACCCCAGACGGGGAGCCCTGTGGCCTGATGAACCACCTAACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR TCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTGGCTACCGACCGATCTaGGCAGTTGAAGAGGCGGTC +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVGYRPI*AVEEAV
Trigger: GACCGCCTCTTCAACTGCTCAGATCGGTCGGTAGCC...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp CATTTCCTCTGCCTCCTCATGGTGCTCAATGAGGGCTTGTGGGGGAAGGTTACGGGTTCCGCCACCGGCTaGCAGGATCCATGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: HFLCLLMVLNEGLWGKVTGSATG*QDPCGH
Trigger: GTGGCCACATGGATCCTGGCAGCCGGTGGCGGAACC...CGTAACCTTCCCCCACAAGCCCTCATTGAGCACCATGAGGAGGCAGAGGAAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR GCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTGCCCGCGTCAGCTCCTaGAACGCTGCCTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVARVSS*NAAFCC
Trigger: ACAGCAAAAGGCAGCGTTGCAGGAGCTGACGCGGGC...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GACTCTGGCAGCAGCCTGCGTACTGTGGTGGTCCTCATCTTGGCAAAATCAGCCGGCTACCGACCGATCTaGGCAGTTGAAGAGGCGGTC +
Preference number: 4 (lower is better)
Translates to: DSGSSLRTVVVLILAKSAGYRPI*AVEEAV
Trigger: GACCGCCTCTTCAACTGCTCAGATCGGTCGGTAGCC...GGCTGATTTTGCCAAGATGAGGACCACCACAGTACGCAGGCTGCTGCCAGAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR TCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTGTAGCACTCACTGTATaGTCGGTGGGGAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVVALTV*SVGSSI
Trigger: GATGGAGCTCCCCACCGATCATACAGTGAGTGCTAC...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTGTGGGTCACCAGGTTTaGTGCCAAACACCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVVGHQV*CQTPGY
Trigger: GTAGCCTGGTGTTTGGCATCAAACCTGGTGACCCAC...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCTTCCCAGTCCCACGCTaGTGCCGACCCTGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSFPVPR*CRPWGV
Trigger: GACTCCCCAGGGTCGGCATCAGCGTGGGACTGGGAA...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ACTTTCCCCGGTGTTGAGGTTGAGGTAGCTGTAATACGGATCTCCGTACTGCAGCTCCATCAATGGGAGTaGCCCCTGCACCGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: TFPGVEVEVAVIRISVLQLHQWE*PLHREA
Trigger: GGCCTCGCGGTGCAGGGGTCACTCCCATTGATGGAG...CTGCAGTACGGAGATCCGTATTACAGCTACCTCAACCTCAACACCGGGGAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448770.5
CDS-3UTR GCA 90 bp CCACCCTGGACATTTCTTCCCCCAATAGGCTGGTTGGTGACTCTGTCTCGGGCTGAGGGGTCAGTCAAGTaGTTTAGGCTAGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: PPWTFLPPIGWLVTLSRAEGSVK*FRLGPL
Trigger: CAGCGGGCCTAGCCTAAAGCACTTGACTGACCCCTC...AGCCCGAGACAGAGTCACCAACCAGCCTATTGGGGGAAGAAATGTCCAGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTAAATCAGCCCCTCTGTaGACGCAGCGGAAATGGGAG +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVKSAPL*TQRKWE
Trigger: CTCCCATTTCCGCTGCGTGCACAGAGGGGCTGATTT...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTACCCGCCCTAGGCCCTaGGGTTTCGGTTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSITRPRP*GFGFSG
Trigger: CCCCGAGAAACCGAAACCGCAGGGCCTAGGGCGGGT...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333990.10
ENST00000409894.7
ENST00000448770.5
ENST00000537335.5
CDS-3UTR GCA 90 bp ACTTTCCCCGGTGTTGAGGTTGAGGTAGCTGTAATACGGATCTCCGTACTGCAGAATGGGAGTGACCCCTaGACCGCGAGGCCGAGACCC +
Preference number: 4 (lower is better)
Translates to: TFPGVEVEVAVIRISVLQNGSDP*TARPRP
Trigger: GGGTCTCGGCCTCGCGGTGCAGGGGTCACTCCCATT...CTGCAGTACGGAGATCCGTATTACAGCTACCTCAACCTCAACACCGGGGAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448770.5
CDS-3UTR CCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTGCAGCCTGCGTACTGTaGTGGTCCTCATCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVAACVL*WSSSWQ
Trigger: TTGCCAAGATGAGGACCACCACAGTACGCAGGCTGC...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTCATACGGCAGTTAGGTaGTTCATCAGGCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVHTAVR*FIRPQG
Trigger: GCCCTGTGGCCTGATGAACCACCTAACTGCCGTATG...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTCAGGCTGGAGTGTGGTaGCACAATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVQAGVW*HNLGSL
Trigger: CAGTGAGCCAAGATTGTGCCACCACACTCCAGCCTG...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR CAA 72 bp TCTGGCAGCAGCCTGCGTACTGTGGTGGTCCTCATCTaGGCAAAATCAGCCCCTCTGTGCACGCAGCGGAAA +
Preference number: 4 (lower is better)
Translates to: SGSSLRTVVVLI*AKSAPLCTQRK
Trigger: TTTCCGCTGCGTGCACAGAGGGGCTGATTTTGCCAAGATGAGGACCACCACAGTACGCAGGCTGCTGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR GCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCGGTTCCGCCACCGGCTaGCAGGATCCATGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPGSATG*QDPCGH
Trigger: GTGGCCACATGGATCCTGGCAGCCGGTGGCGGAACC...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp CATTTCCTCTGCCTCCTCATGGTGCTCAATGAGGGCTTGTGGGGGAAGGTTACGGAGGGGTCAGTCAAGTaGTTTAGGCTAGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: HFLCLLMVLNEGLWGKVTEGSVK*FRLGPL
Trigger: CAGCGGGCCTAGCCTAAAGCACTTGACTGACCCCTC...CGTAACCTTCCCCCACAAGCCCTCATTGAGCACCATGAGGAGGCAGAGGAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR GCA 90 bp GCAGTTAGGTGGTTCATCAGGCCACAGGGCTCCCCGTCTGGGGTATGCACGGGAGGAAAGCCCATAGTTTaGTTACCCATCTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: AVRWFIRPQGSPSGVCTGGKPIV*LPIWHW
Trigger: CCAATGCCAGATGGGTAAGCAAACTATGGGCTTTCC...TCCCGTGCATACCCCAGACGGGGAGCCCTGTGGCCTGATGAACCACCTAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTCTGCCAGGATCCATGTaGCCACCTGCACACCGGACG +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSILPGSM*PPAHRT
Trigger: CGTCCGGTGTGCAGGTGGCCACATGGATCCTGGCAG...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCTGTCCAGCCAGAGCGTaGCGGGCCCTCCCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPCPARA*RALPFS
Trigger: GGAGAAAGGGAGGGCCCGCCACGCTCTGGCTGGACA...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409894.7
ENST00000537335.5
CDS-3UTR TCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCTTGGGATTAGTGGCGTaGGCCACTGCGCCCATCCTG +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSLGLVA*ATAPIL
Trigger: CAGGATGGGCGCAGTGGCTCACGCCACTAATCCCAA...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR GCA 90 bp CATTTCCTCTGCCTCCTCATGGTGCTCAATGAGGGCTTGTGGGGGAAGGTTACGTCGGCCCCGGCATTCTaGTGGATAAACATTGGCCTC +
Preference number: 4 (lower is better)
Translates to: HFLCLLMVLNEGLWGKVTSAPAF*WINIGL
Trigger: GAGGCCAATGTTTATCCAGCAGAATGCCGGGGCCGA...CGTAACCTTCCCCCACAAGCCCTCATTGAGCACCATGAGGAGGCAGAGGAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR GCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCTCCCCGTCTGGGGTATaGACGGGACAAAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSSPSGV*TGQRKP
Trigger: GGGCTTCCTTTGTCCCGTGCATACCCCAGACGGGGA...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTCCCAATGCTAAGTTCTaGACAGGCCGTACCAGTCTA +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVPNAKF*TGRTSL
Trigger: TAGACTGGTACGGCCTGTGCAGAACTTAGCATTGGG...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GCAGTTAGGTGGTTCATCAGGCCACAGGGCTCCCCGTCTGGGGTATGCACGGGAATTGAACAGAATGTCTaGGACCATCCCACTCTCAGT +
Preference number: 4 (lower is better)
Translates to: AVRWFIRPQGSPSGVCTGIEQNV*DHPTLS
Trigger: ACTGAGAGTGGGATGGTCCCAGACATTCTGTTCAAT...TCCCGTGCATACCCCAGACGGGGAGCCCTGTGGCCTGATGAACCACCTAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGTGTCCAGCCAGAGCGTaGCGGGCCCTCCCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARCPARA*RALPFS
Trigger: GGAGAAAGGGAGGGCCCGCCACGCTCTGGCTGGACA...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409894.7
ENST00000537335.5
CDS-3UTR CCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTACACTGTATGATCGGTaGGGAGCTCCATCAATGGGA +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVTLYDR*GAPSMG
Trigger: TCCCATTGATGGAGCTCCCCACCGATCATACAGTGT...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409894.7
CDS-3UTR TCA 90 bp ACTACACAGAGTACAGTTGTATTTTCTGTTGCGCATGGCAGACCAAGAAGGGGGCGTGCACAGCGTAGTTaGAGGACTCCACGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: TTQSTVVFSVAHGRPRRGRAQRS*RTPRAP
Trigger: GGGCGCACGTGGAGTCCTTCAACTACGCTGTGCACG...CCCCCTTCTTGGTCTGCCATGCGCAACAGAAAATACAACTGTACTCTGTGTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR TCA 90 bp AGGGCTTGTGGGGGAAGGTTACGTAAGTTGCAAAGCTTGGATTTCACCATGATGCGTGCACAGCGTAGTTaGAGGACTCCACGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: RACGGRLRKLQSLDFTMMRAQRS*RTPRAP
Trigger: GGGCGCACGTGGAGTCCTTCAACTACGCTGTGCACG...CATCATGGTGAAATCCAAGCTTTGCAACTTACGTAACCTTCCCCCACAAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR TCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTAGTGGAGGTTCATATTaGCAGCGGAATGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVSGGSY*QRNVLP
Trigger: GGGAAGAACATTCCGCTGTCAATATGAACCTCCACT...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGCCACCCAGCCAACCATaGCACCGTCCAGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARPPSQP*HRPAGQ
Trigger: CTGTCCTGCTGGACGGTGTCATGGTTGGCTGGGTGG...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTGAAAACCATGGGGATTaGACAGAATGTCTGGGACCA +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVENHGD*TECLGP
Trigger: TGGTCCCAGACATTCTGTTCAATCCCCATGGTTTTC...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCGGCTACCGACCGATCTaGGCAGTTGAAGAGGCGGTC +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPGYRPI*AVEEAV
Trigger: GACCGCCTCTTCAACTGCTCAGATCGGTCGGTAGCC...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp CACTTCCATGGGCAAAGCCTCGTTCCCAAGAGGCCTTATTCACAATCATGGCATATCCATGTGGCCACCTaGACACCGGACGCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: HFHGQSLVPKRPYSQSWHIHVAT*TPDASL
Trigger: GAGACTGGCGTCCGGTGTGCAGGTGGCCACATGGAT...ATGCCATGATTGTGAATAAGGCCTCTTGGGAACGAGGCTTTGCCCATGGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATTTGAAGGACTCCACGTaGGCCCGCGTCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYLKDST*ARVSSC
Trigger: GCAGGAGCTGACGCGGGCGCACGTGGAGTCCTTCAA...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GTGGTCCTCATCTTGGCAAAATCAGCCCCTCTGTGCACGCAGCGGAAATGGGAGACATCCCAATGGTCATaGGGGATGGAAAACCATGGG +
Preference number: 4 (lower is better)
Translates to: VVLILAKSAPLCTQRKWETSQWS*GMENHG
Trigger: CCCATGGTTTTCCATCCCGCATGACCATTGGGATGT...CTCCCATTTCCGCTGCGTGCACAGAGGGGCTGATTTTGCCAAGATGAGGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR GCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTAGATGCACAGCACCATaGCTGGCTTCCAAAATGGAT +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVRCTAP*LASKMD
Trigger: ATCCATTTTGGAAGCCAGGCATGGTGCTGTGCATCT...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGCCAGCAGCCTTTAACATCTCACCAAAGTATTCTAAGGCCGAGTTCTCCTCTGCTGCCAGGATCCATGTaGCCACCTGCACACCGGACG +
Preference number: 4 (lower is better)
Translates to: SQQPLTSHQSILRPSSPLLPGSM*PPAHRT
Trigger: CGTCCGGTGTGCAGGTGGCCACATGGATCCTGGCAG...CAGAGGAGAACTCGGCCTTAGAATACTTTGGTGAGATGTTAAAGGCTGCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTGGTGTGAGGACTTCCTaGTTCACCAAACTATCAGGA +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVGVRTS*FTKLSG
Trigger: TCCTGATAGTTTGGTGAACCAGGAAGTCCTCACACC...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GACACTTCCATGGGCAAAGCCTCGTTCCCAAGAGGCCTTATTCACAATCATGGCGGCCGAGTTCTCCTCTaGGAAGATGAAGGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: DTSMGKASFPRGLIHNHGGRVLL*EDEGCS
Trigger: GCTACACCCTTCATCTTCTCAGAGGAGAACTCGGCC...GCCATGATTGTGAATAAGGCCTCTTGGGAACGAGGCTTTGCCCATGGAAGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp AGGGCTTGTGGGGGAAGGTTACGTAAGTTGCAAAGCTTGGATTTCACCATGATGATCCATGTGGCCACCTaGACACCGGACGCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: RACGGRLRKLQSLDFTMMIHVAT*TPDASL
Trigger: GAGACTGGCGTCCGGTGTGCAGGTGGCCACATGGAT...CATCATGGTGAAATCCAAGCTTTGCAACTTACGTAACCTTCCCCCACAAGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR GCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAAGGTTCCGCCACCGGCTaGCAGGATCCATGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQGSATG*QDPCGH
Trigger: GTGGCCACATGGATCCTGGCAGCCGGTGGCGGAACC...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATGCCCGCGTCAGCTCCTaGAACGCTGCCTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYARVSS*NAAFCC
Trigger: ACAGCAAAAGGCAGCGTTGCAGGAGCTGACGCGGGC...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTAAATCAGCCCCTCTGTaGACGCAGCGGAAATGGGAG +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIKSAPL*TQRKWE
Trigger: CTCCCATTTCCGCTGCGTGCACAGAGGGGCTGATTT...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTGCAGCCTGCGTACTGTaGTGGTCCTCATCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIAACVL*WSSSWQ
Trigger: TTGCCAAGATGAGGACCACCACAGTACGCAGGCTGC...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GCAATCACACTCAGCAGGCTGTGTGGAAAGAGTTCCTGGTGTGTGGTAACTCCAGCAGCCTGCGTACTGTaGTGGTCCTCATCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: AITLSRLCGKSSWCVVTPAACVL*WSSSWQ
Trigger: TTGCCAAGATGAGGACCACCACAGTACGCAGGCTGC...TGGAGTTACCACACACCAGGAACTCTTTCCACACAGCCTGCTGAGTGTGATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATACAGGGCTCCCCGTCTaGGGTATGCACGGGACAAAG +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYTGLPV*GMHGTK
Trigger: CTTTGTCCCGTGCATACCCCAGACGGGGAGCCCTGT...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp CATTTCCTCTGCCTCCTCATGGTGCTCAATGAGGGCTTGTGGGGGAAGGTTACGTCACTGTATGATCGGTaGGGAGCTCCATCAATGGGA +
Preference number: 4 (lower is better)
Translates to: HFLCLLMVLNEGLWGKVTSLYDR*GAPSMG
Trigger: TCCCATTGATGGAGCTCCCCACCGATCATACAGTGA...CGTAACCTTCCCCCACAAGCCCTCATTGAGCACCATGAGGAGGCAGAGGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp CAGAATGTCTGGGACCATCCCACTCTCAGTAAAAGGCATGTCCTCAGCCGGCCATCACTGTATGATCGGTaGGGAGCTCCATCAATGGGA +
Preference number: 4 (lower is better)
Translates to: QNVWDHPTLSKRHVLSRPSLYDR*GAPSMG
Trigger: TCCCATTGATGGAGCTCCCCACCGATCATACAGTGA...TGGCCGGCTGAGGACATGCCTTTTACTGAGAGTGGGATGGTCCCAGACATTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTTTTATCTCCGATAGTTaGGTTCCGAGGCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVFISDS*VPRHSH
Trigger: ATGAGAGTGCCTCGGAACCCAACTATCGGAGATAAA...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTCGGGATGGAAAACCATaGGGATTGAACAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVRDGKP*GLNRMS
Trigger: AGACATTCTGTTCAATCCCCATGGTTTTCCATCCCG...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTAAACGGATTCCACCCTaGACATTTCTTCCCCCAATA +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVKRIPP*TFLPPI
Trigger: TATTGGGGGAAGAAATGTCCAGGGTGGAATCCGTTT...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTCTCTTTGGCTCTCATTaGCTCAGTCAATTAGGATCG +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVLFGSH*LSQLGS
Trigger: CGATCCTAATTGACTGAGCCAATGAGAGCCAAAGAG...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAACGTGCACAGCGTAGTTaGAGGACTCCACGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQRAQRS*RTPRAP
Trigger: GGGCGCACGTGGAGTCCTTCAACTACGCTGTGCACG...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCGGCCGAGTTCTCCTCTaGGAAGATGAAGGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPGRVLL*EDEGCS
Trigger: GCTACACCCTTCATCTTCTCAGAGGAGAACTCGGCC...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCACCAAAAACGTCGAGTaGACGGGCCGATTAAGGCCG +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPTKNVE*TGRLRP
Trigger: CGGCCTTAATCGGCCCGTTCACTCGACGTTTTTGGT...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409894.7
ENST00000537335.5
CDS-3UTR GCA 90 bp TGTGGGGGAAGGTTACGTAAGTTGCAAAGCTTGGATTTCACCATGATGGGAACAGCCCGCGTCAGCTCCTaGAACGCTGCCTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: CGGRLRKLQSLDFTMMGTARVSS*NAAFCC
Trigger: ACAGCAAAAGGCAGCGTTGCAGGAGCTGACGCGGGC...TGTTCCCATCATGGTGAAATCCAAGCTTTGCAACTTACGTAACCTTCCCCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR GCA 90 bp GAGGTTGAGGTAGCTGTAATACGGATCTCCGTACTGCAGTTTTGCTCCTATAAATTGAAGGACTCCACGTaGGCCCGCGTCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: EVEVAVIRISVLQFCSYKLKDST*ARVSSC
Trigger: GCAGGAGCTGACGCGGGCGCACGTGGAGTCCTTCAA...TTTATAGGAGCAAAACTGCAGTACGGAGATCCGTATTACAGCTACCTCAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAATTGAAGGACTCCACGTaGGCCCGCGTCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQLKDST*ARVSSC
Trigger: GCAGGAGCTGACGCGGGCGCACGTGGAGTCCTTCAA...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp TCTGCCTCCTCATGGTGCTCAATGAGGGCTTGTGGGGGAAGGTTACGTAAGTTGAGGAACTCCGCAGCTTaGTCATTTGGGTACCAGTCA +
Preference number: 4 (lower is better)
Translates to: SASSWCSMRACGGRLRKLRNSAA*SFGYQS
Trigger: TGACTGGTACCCAAATGAGCAAGCTGCGGAGTTCCT...CAACTTACGTAACCTTCCCCCACAAGCCCTCATTGAGCACCATGAGGAGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR GCA 90 bp GTGGTCCTCATCTTGGCAAAATCAGCCCCTCTGTGCACGCAGCGGAAATGGGAGGAAGAGAATCTGCGATaGCTGGAGCAAGATCCTTAT +
Preference number: 4 (lower is better)
Translates to: VVLILAKSAPLCTQRKWEEENLR*LEQDPY
Trigger: ATAAGGATCTTGCTCCAGGCATCGCAGATTCTCTTC...CTCCCATTTCCGCTGCGTGCACAGAGGGGCTGATTTTGCCAAGATGAGGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR GCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCGAGACCATGCAAAGCTaGAGACTTCCCGGCCATACT +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSETMQS*RLPGHT
Trigger: AGTATGGCCGGGAAGTCTGCAGCTTTGCATGGTCTC...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp ACGATACAGTTTGTTATCCGATCGGTCTTGATAAGTGAGAAGTGGAAAGCCCATACCCGCCCTAGGCCCTaGGGTTTCGGTTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: TIQFVIRSVLISEKWKAHTRPRP*GFGFSG
Trigger: CCCCGAGAAACCGAAACCGCAGGGCCTAGGGCGGGT...ATGGGCTTTCCACTTCTCACTTATCAAGACCGATCGGATAACAAACTGTATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTCCTCTGCCTCCTCATaGTGCTCAATGAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSISSASS*CSMRAC
Trigger: ACAAGCCCTCATTGAGCACCATGAGGAGGCAGAGGA...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR CCA 90 bp CAGAATGTCTGGGACCATCCCACTCTCAGTAAAAGGCATGTCCTCAGCCGGCCATTACCCATCTGGCATTaGTACATGTTCCGTGGACTC +
Preference number: 4 (lower is better)
Translates to: QNVWDHPTLSKRHVLSRPLPIWH*YMFRGL
Trigger: GAGTCCACGGAACATGTACCAATGCCAGATGGGTAA...TGGCCGGCTGAGGACATGCCTTTTACTGAGAGTGGGATGGTCCCAGACATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTCATAATAATCATACATaGAGGGTCTCACCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVHNNHT*RVSPRD
Trigger: GTCCCTTGGTGAGACCCTCCATGTATGATTATTATG...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTAAATCACAGCAACGATaGCATTGGTCCCAATTGGAT +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVKSQQR*HWSQLD
Trigger: ATCCAATTGGGACCAATGCCATCGTTGCTGTGATTT...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp CAGAATGTCTGGGACCATCCCACTCTCAGTAAAAGGCATGTCCTCAGCCGGCCAAAGGGTGTAGCATCATaGCAGAGACCATGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: QNVWDHPTLSKRHVLSRPKGVAS*QRPCKA
Trigger: AGCTTTGCATGGTCTCTGCCATGATGCTACACCCTT...TGGCCGGCTGAGGACATGCCTTTTACTGAGAGTGGGATGGTCCCAGACATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCCTTCCCCCAATAGGCTaGTTGGTGACTCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPLPPIG*LVTLSR
Trigger: CCGAGACAGAGTCACCAACCAGCCTATTGGGGGAAG...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTAGACCAAGAAGGGGGTaGCTTCTCCAACAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIRPRRG*LLQQWR
Trigger: TCTCCACTGTTGGAGAAGCCACCCCCTTCTTGGTCT...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCGTGGTGGCACAATCTTaGCTCACTGCCTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPVVAQS*LTAWTF
Trigger: GAAGGTCCAGGCAGTGAGCCAAGATTGTGCCACCAC...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR TCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATGTAGCACTCACTGTATaGTCGGTGGGGAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYVALTV*SVGSSI
Trigger: GATGGAGCTCCCCACCGATCATACAGTGAGTGCTAC...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATGTGGGTCACCAGGTTTaGTGCCAAACACCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYVGHQV*CQTPGY
Trigger: GTAGCCTGGTGTTTGGCATCAAACCTGGTGACCCAC...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGGGTGGGTGGATCACTTaGGGTCAGGGTCTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARGGWIT*GQGLQD
Trigger: GTCTTGAAGACCCTGACCTCAAGTGATCCACCCACC...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATGGTGGGTGGATCACTTaGGGTCAGGGTCTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYGGWIT*GQGLQD
Trigger: GTCTTGAAGACCCTGACCTCAAGTGATCCACCCACC...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGACCAAAAACGTCGAGTaGACGGGCCGATTAAGGCCG +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARTKNVE*TGRLRP
Trigger: CGGCCTTAATCGGCCCGTTCACTCGACGTTTTTGGT...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409894.7
ENST00000537335.5
CDS-3UTR TCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATTTCCCAGTCCCACGCTaGTGCCGACCCTGGGGAGTC +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHFPVPR*CRPWGV
Trigger: GACTCCCCAGGGTCGGCATCAGCGTGGGACTGGGAA...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACGGTTCCGCCACCGGCTaGCAGGATCCATGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNGSATG*QDPCGH
Trigger: GTGGCCACATGGATCCTGGCAGCCGGTGGCGGAACC...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGAAACAGAGTTCCTAAGGAAAGAATCATCCTCTTTTCCTTTGATGAGCTCCTGGGTTCCGCCACCGGCTaGCAGGATCCATGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RNRVPKERIILFSFDELLGSATG*QDPCGH
Trigger: GTGGCCACATGGATCCTGGCAGCCGGTGGCGGAACC...CAGGAGCTCATCAAAGGAAAAGAGGATGATTCTTTCCTTAGGAACTCTGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000430293.1
CDS-3UTR GCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTGGTTCCGCCACCGGCTaGCAGGATCCATGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTGSATG*QDPCGH
Trigger: GTGGCCACATGGATCCTGGCAGCCGGTGGCGGAACC...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGTCGGCCCCGGCATTCTaGTGGATAAACATTGGCCTC +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARSAPAF*WINIGL
Trigger: GAGGCCAATGTTTATCCAGCAGAATGCCGGGGCCGA...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR GCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTGAAGGTTACGTAAGTTaGAAAGCTTGGATTTCACCA +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVEGYVS*KAWISP
Trigger: TGGTGAAATCCAAGCTTTGCAACTTACGTAACCTTC...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR GCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGTCTGCCTCCTCATGGTaGTCAATGAGGGCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARSASSW*SMRACG
Trigger: CCCACAAGCCCTCATTGAGCACCATGAGGAGGCAGA...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR GCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGAAATCAGCCCCTCTGTaGACGCAGCGGAAATGGGAG +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARKSAPL*TQRKWE
Trigger: CTCCCATTTCCGCTGCGTGCACAGAGGGGCTGATTT...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTCGTCATCTAACTTCTaGAGAACGCGTGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSISSSNF*RTRGSP
Trigger: TGGTGACCCACGCGTTCTGCAGAAGTTAGATGACGA...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTACATCCCAATGGTCATaGGGGATGGAAAACCATGGG +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSITSQWS*GMENHG
Trigger: CCCATGGTTTTCCATCCCGCATGACCATTGGGATGT...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCGAGACCATGCAAAGCTaGAGACTTCCCGGCCATACT +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPETMQS*RLPGHT
Trigger: AGTATGGCCGGGAAGTCTGCAGCTTTGCATGGTCTC...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGACCCGCCCTAGGCCCTaGGGTTTCGGTTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWTRPRP*GFGFSG
Trigger: CCCCGAGAAACCGAAACCGCAGGGCCTAGGGCGGGT...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333990.10
ENST00000409894.7
ENST00000448770.5
ENST00000537335.5
CDS-3UTR GCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCTCTTCCCTCACACAGTaGATTGAAACTCCTGCACCG +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSSSLTQ*IETPAP
Trigger: CGGTGCAGGAGTTTCAATGCACTGTGTGAGGGAAGA...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537335.5
CDS-3UTR CCA 90 bp CCAGCAATCCCAGTCTTGAACACTTGTCCCAGGGAAATGAAACTTATGTTTACACTGCCAGGATCCATGTaGCCACCTGCACACCGGACG +
Preference number: 4 (lower is better)
Translates to: PAIPVLNTCPREMKLMFTLPGSM*PPAHRT
Trigger: CGTCCGGTGTGCAGGTGGCCACATGGATCCTGGCAG...TGTAAACATAAGTTTCATTTCCCTGGGACAAGTGTTCAAGACTGGGATTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTGTCTTATCATTGCAATaGGAAAATTTCTCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVVLSLQ*ENFSEA
Trigger: TGCCTCGGAGAAATTTTCCCATTGCAATGATAAGAC...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR CCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCTGGTGGTCCTCATCTTaGCAAAATCAGCCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSWWSSS*QNQPLC
Trigger: ACAGAGGGGCTGATTTTGCCAAGATGAGGACCACCA...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTGCCTGCGTACTGTGGTaGTCCTCATCTTGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIACVLW*SSSWQN
Trigger: ATTTTGCCAAGATGAGGACCACCACAGTACGCAGGC...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTCACTGTATGATCGGTaGGGAGCTCCATCAATGGGA +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSISLYDR*GAPSMG
Trigger: TCCCATTGATGGAGCTCCCCACCGATCATACAGTGA...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTACTCAGCAGGCTGTGTaGAAAGAGTTCCTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSITQQAV*KEFLVC
Trigger: ACACACCAGGAACTCTTTCCACACAGCCTGCTGAGT...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTTGCTTACCCATCTGGCATTGGTACATGTTCCGTGGACTCTGGTTGTGATCAGCTTCTGCAGAACGCGTaGGTCACCAGGTTTGATGCC +
Preference number: 4 (lower is better)
Translates to: FAYPSGIGTCSVDSGCDQLLQNA*VTRFDA
Trigger: GGCATCAAACCTGGTGACCCACGCGTTCTGCAGAAG...CTGATCACAACCAGAGTCCACGGAACATGTACCAATGCCAGATGGGTAAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCTTCCCCCAATAGGCTaGTTGGTGACTCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYLPPIG*LVTLSR
Trigger: CCGAGACAGAGTCACCAACCAGCCTATTGGGGGAAG...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCCACTTCACACACACATaGGCTACCGACCGATCTGAG +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPHFTHT*ATDRSE
Trigger: CTCAGATCGGTCGGTAGCCCATGTGTGTGTGAAGTG...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ACTTTCCCCGGTGTTGAGGTTGAGGTAGCTGTAATACGGATCTCCGTACTGCAGATTTTCTGTTGCGCATaGCAGACCAAGAAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: TFPGVEVEVAVIRISVLQIFCCA*QTKKGV
Trigger: CACCCCCTTCTTGGTCTGCCATGCGCAACAGAAAAT...CTGCAGTACGGAGATCCGTATTACAGCTACCTCAACCTCAACACCGGGGAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTTATAAAAGGATAGTATaGCAGAGCTCTGTGATGACG +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVYKRIV*QSSVMT
Trigger: CGTCATCACAGAGCTCTGCCATACTATCCTTTTATA...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CCA 90 bp CACTCTCATAGTGATGCAAACACACTTGAATTTTCCACTCCCAGTGTCATTACTTGTCCAGCCAGAGCGTaGCGGGCCCTCCCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: HSHSDANTLEFSTPSVITCPARA*RALPFS
Trigger: GGAGAAAGGGAGGGCCCGCCACGCTCTGGCTGGACA...AGTAATGACACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCACTATGAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CAA 72 bp TCACTGCGACTACACAGAGTACAGTTGTATTTTCTGTaGCGCATGGCAGACCAAGAAGGGGGTGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SLRLHRVQLYFL*RMADQEGGGFS
Trigger: GGAGAAGCCACCCCCTTCTTGGTCTGCCATGCGCAACAGAAAATACAACTGTACTCTGTGTAGTCGCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR TCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACCGTGCACAGCGTAGTTaGAGGACTCCACGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNRAQRS*RTPRAP
Trigger: GGGCGCACGTGGAGTCCTTCAACTACGCTGTGCACG...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATAACATAAGGAAGAGCTaGCCCGGTGTGAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYNIRKS*PGVRTS
Trigger: GGAAGTCCTCACACCGGGTCAGCTCTTCCTTATGTT...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TTTGCTTACCCATCTGGCATTGGTACATGTTCCGTGGACTCTGGTTGTGATCAGGGGAGAGGTAGCGTATaGAGTTCAGCTTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: FAYPSGIGTCSVDSGCDQGRGSV*SSACQP
Trigger: TGGCTGACAAGCTGAACTTCATACGCTACCTCTCCC...CTGATCACAACCAGAGTCCACGGAACATGTACCAATGCCAGATGGGTAAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR TCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTCATTACTGCACACTTTaGTGTTATCCACAACACAAT +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVHYCTL*CYPQHN
Trigger: ATTGTGTTGTGGATAACATCAAAGTGTGCAGTAATG...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GACACTTCCATGGGCAAAGCCTCGTTCCCAAGAGGCCTTATTCACAATCATGGCCCAGTTCTAGCCCACTaGTGCCACTATATAACCTCT +
Preference number: 4 (lower is better)
Translates to: DTSMGKASFPRGLIHNHGPVLAH*CHYITS
Trigger: AGAGGTTATATAGTGGCATCAGTGGGCTAGAACTGG...GCCATGATTGTGAATAAGGCCTCTTGGGAACGAGGCTTTGCCCATGGAAGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTAGGTTCCGCCACCGGCTaGCAGGATCCATGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVGSATG*QDPCGH
Trigger: GTGGCCACATGGATCCTGGCAGCCGGTGGCGGAACC...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGCCATTGGTTCCGCCACCGGCTaGCAGGATCCATGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GKISPRHNQHSDDFFNAIGSATG*QDPCGH
Trigger: GTGGCCACATGGATCCTGGCAGCCGGTGGCGGAACC...AATGGCATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR GCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGGTTCCGCCACCGGCTaGCAGGATCCATGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTGSATG*QDPCGH
Trigger: GTGGCCACATGGATCCTGGCAGCCGGTGGCGGAACC...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAAGAGGGGTCAGTCAAGTaGTTTAGGCTAGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQEGSVK*FRLGPL
Trigger: CAGCGGGCCTAGCCTAAAGCACTTGACTGACCCCTC...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAAGGACTCCACGTaGGCCCGCGTCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWLKDST*ARVSSC
Trigger: GCAGGAGCTGACGCGGGCGCACGTGGAGTCCTTCAA...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp TGTAAGAAATCACAGCAACGATGGCATTGGTCCCAATTGGATAGTTATCCATGTTTGAAGGACTCCACGTaGGCCCGCGTCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CKKSQQRWHWSQLDSYPCLKDST*ARVSSC
Trigger: GCAGGAGCTGACGCGGGCGCACGTGGAGTCCTTCAA...ACATGGATAACTATCCAATTGGGACCAATGCCATCGTTGCTGTGATTTCTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp TGTGGGGGAAGGTTACGTAAGTTGCAAAGCTTGGATTTCACCATGATGGGAACATCGGCCCCGGCATTCTaGTGGATAAACATTGGCCTC +
Preference number: 4 (lower is better)
Translates to: CGGRLRKLQSLDFTMMGTSAPAF*WINIGL
Trigger: GAGGCCAATGTTTATCCAGCAGAATGCCGGGGCCGA...TGTTCCCATCATGGTGAAATCCAAGCTTTGCAACTTACGTAACCTTCCCCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR GCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCCCCAATGCTAAGTTCTaGACAGGCCGTACCAGTCTA +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPPNAKF*TGRTSL
Trigger: TAGACTGGTACGGCCTGTGCAGAACTTAGCATTGGG...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTGGAAAGCCCATAGTTTaGTTACCCATCTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIGKPIV*LPIWHW
Trigger: CCAATGCCAGATGGGTAAGCAAACTATGGGCTTTCC...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTCTTAAAATGCCCTTCTaGCCATGGCGACTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSILKMPF*PWRLAN
Trigger: ATTTGCCAGTCGCCATGGGCAGAAGGGCATTTTAAG...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATAGCAGGGACTATAGATaGACAGCACCATGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYSRDYR*TAPCLA
Trigger: AGCCAGGCATGGTGCTGTGCATCTATAGTCCCTGCT...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTCTGTCCTTGAACTCCTaGACTCAAATGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSILSLNS*TQMILP
Trigger: TGGGAGGATCATTTGAGTGCAGGAGTTCAAGGACAG...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCAACCCGCCCTAGGCCCTaGGGTTTCGGTTTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSTRPRP*GFGFSG
Trigger: CCCCGAGAAACCGAAACCGCAGGGCCTAGGGCGGGT...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409894.7
ENST00000537335.5
CDS-3UTR CCA 90 bp AGAAACAGAGTTCCTAAGGAAAGAATCATCCTCTTTTCCTTTGATGAGCTCCTGCTGCCAGGATCCATGTaGCCACCTGCACACCGGACG +
Preference number: 4 (lower is better)
Translates to: RNRVPKERIILFSFDELLLPGSM*PPAHRT
Trigger: CGTCCGGTGTGCAGGTGGCCACATGGATCCTGGCAG...CAGGAGCTCATCAAAGGAAAAGAGGATGATTCTTTCCTTAGGAACTCTGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000430293.1
CDS-3UTR CCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCGCAGATGGTCCCTTTTaGAACTGTAGGTGGACTGAT +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSADGPF*NCRWTD
Trigger: ATCAGTCCACCTACAGTTCCAAAAGGGACCATCTGC...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR CCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCCTGCTGGATAAACATTaGCCTCTTTGCAGATGGTCC +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSLLDKH*PLCRWS
Trigger: GGACCATCTGCAAAGAGGCCAATGTTTATCCAGCAG...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR CCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCGCCCCGGCATTCTGCTaGATAAACATTGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPAPAFC*INIGLF
Trigger: AAAGAGGCCAATGTTTATCCAGCAGAATGCCGGGGC...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR CCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGTCCTCTGCCTCCTCATaGTGCTCAATGAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARSSASS*CSMRAC
Trigger: ACAAGCCCTCATTGAGCACCATGAGGAGGCAGAGGA...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR CCA 90 bp GCAATCACACTCAGCAGGCTGTGTGGAAAGAGTTCCTGGTGTGTGGTAACTCCACGCAGCTTGCTCATTTaGGTACCAGTCAGGAACATT +
Preference number: 4 (lower is better)
Translates to: AITLSRLCGKSSWCVVTPRSLLI*VPVRNI
Trigger: AATGTTCCTGACTGGTACCCAAATGAGCAAGCTGCG...TGGAGTTACCACACACCAGGAACTCTTTCCACACAGCCTGCTGAGTGTGATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCCGCAGCTTGCTCATTTaGGTACCAGTCAGGAACATT +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSRSLLI*VPVRNI
Trigger: AATGTTCCTGACTGGTACCCAAATGAGCAAGCTGCG...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp CTGCCCATGGCGACTGGCAAATTTATCTCCGATAGTTGGGTTCCGAGGCACTCTTTGGTACATGTTCCGTaGACTCTGGTTGTGATCAGA +
Preference number: 4 (lower is better)
Translates to: LPMATGKFISDSWVPRHSLVHVP*TLVVIR
Trigger: TCTGATCACAACCAGAGTCCACGGAACATGTACCAA...AGAGTGCCTCGGAACCCAACTATCGGAGATAAATTTGCCAGTCGCCATGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp GCAATCACACTCAGCAGGCTGTGTGGAAAGAGTTCCTGGTGTGTGGTAACTCCATTACCCATCTGGCATTaGTACATGTTCCGTGGACTC +
Preference number: 4 (lower is better)
Translates to: AITLSRLCGKSSWCVVTPLPIWH*YMFRGL
Trigger: GAGTCCACGGAACATGTACCAATGCCAGATGGGTAA...TGGAGTTACCACACACCAGGAACTCTTTCCACACAGCCTGCTGAGTGTGATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp CTGCCCATGGCGACTGGCAAATTTATCTCCGATAGTTGGGTTCCGAGGCACTCTCGGGATGGAAAACCATaGGGATTGAACAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: LPMATGKFISDSWVPRHSRDGKP*GLNRMS
Trigger: AGACATTCTGTTCAATCCCCATGGTTTTCCATCCCG...AGAGTGCCTCGGAACCCAACTATCGGAGATAAATTTGCCAGTCGCCATGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCAAGGGTGTAGCATCATaGCAGAGACCATGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSKGVAS*QRPCKA
Trigger: AGCTTTGCATGGTCTCTGCCATGATGCTACACCCTT...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GTTGGGTTCCGAGGCACTCTCATAGTGATGCAAACACACTTGAATTTTCCACTCCTTCCCCCAATAGGCTaGTTGGTGACTCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: VGFRGTLIVMQTHLNFPLLPPIG*LVTLSR
Trigger: CCGAGACAGAGTCACCAACCAGCCTATTGGGGGAAG...GAGTGGAAAATTCAAGTGTGTTTGCATCACTATGAGAGTGCCTCGGAACCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGAGACCAAGAAGGGGGTaGCTTCTCCAACAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARRPRRG*LLQQWR
Trigger: TCTCCACTGTTGGAGAAGCCACCCCCTTCTTGGTCT...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATTGGGAAGCCAAGGAGTaGTCGGGCCCCGCTAACCTC +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHWEAKE*SGPANL
Trigger: GAGGTTAGCGGGGCCCGACCACTCCTTGGCTTCCCA...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537335.5
3UTR CAA 72 bp ATCCCAATGGTCATGCGGGATGGAAAACCATGGGGATaGAACAGAATGTCTGGGACCATCCCACTCTCAGTA +
Preference number: 4 (lower is better)
Translates to: IPMVMRDGKPWG*NRMSGTIPLSV
Trigger: TACTGAGAGTGGGATGGTCCCAGACATTCTGTTCAATCCCCATGGTTTTCCATCCCGCATGACCATTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR TCA 90 bp AATGTTCTTCCCTCACACAGTGCATTGAAACTCCATACTGAGTATAACCAGGCCGTAGCACTCACTGTATaGTCGGTGGGGAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: NVLPSHSALKLHTEYNQAVALTV*SVGSSI
Trigger: GATGGAGCTCCCCACCGATCATACAGTGAGTGCTAC...GGCCTGGTTATACTCAGTATGGAGTTTCAATGCACTGTGTGAGGGAAGAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR TCA 90 bp ATACGCTCATCTTTGAAAGCAAATTCAAAGGGAGGTATAGCCTGTAATCCCAATCCACCCAGCCAACCATaGCACCGTCCAGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: IRSSLKANSKGGIACNPNPPSQP*HRPAGQ
Trigger: CTGTCCTGCTGGACGGTGTCATGGTTGGCTGGGTGG...ATTGGGATTACAGGCTATACCTCCCTTTGAATTTGCTTTCAAAGATGAGCGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR TCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATACCACCCAGCCAACCATaGCACCGTCCAGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIPPSQP*HRPAGQ
Trigger: CTGTCCTGCTGGACGGTGTCATGGTTGGCTGGGTGG...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCACCACCCAGCCAACCATaGCACCGTCCAGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSPPSQP*HRPAGQ
Trigger: CTGTCCTGCTGGACGGTGTCATGGTTGGCTGGGTGG...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp CCATGGCGACTGGCAAATTTATCTCCGATAGTTGGGTTCCGAGGCACTCTCATAGAAAACCATGGGGATTaGACAGAATGTCTGGGACCA +
Preference number: 4 (lower is better)
Translates to: PWRLANLSPIVGFRGTLIENHGD*TECLGP
Trigger: TGGTCCCAGACATTCTGTTCAATCCCCATGGTTTTC...TATGAGAGTGCCTCGGAACCCAACTATCGGAGATAAATTTGCCAGTCGCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR TCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCGAAAACCATGGGGATTaGACAGAATGTCTGGGACCA +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPENHGD*TECLGP
Trigger: TGGTCCCAGACATTCTGTTCAATCCCCATGGTTTTC...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp CAGAATGTCTGGGACCATCCCACTCTCAGTAAAAGGCATGTCCTCAGCCGGCCACCAGTTGTCCTTACTTaGAATTTGTCTGAGACCATA +
Preference number: 4 (lower is better)
Translates to: QNVWDHPTLSKRHVLSRPPVVLT*NLSETI
Trigger: TATGGTCTCAGACAAATTTCAAGTAAGGACAACTGG...TGGCCGGCTGAGGACATGCCTTTTACTGAGAGTGGGATGGTCCCAGACATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR TCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTTGAAGAGGCGGTCATaGAGGAGAAAAGATGTACCA +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSILKRRS*RRKDVP
Trigger: TGGTACATCTTTTCTCCTTCATGACCGCCTCTTCAA...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGGGCTACCGACCGATCTaGGCAGTTGAAGAGGCGGTC +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWGYRPI*AVEEAV
Trigger: GACCGCCTCTTCAACTGCTCAGATCGGTCGGTAGCC...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGCAGCAATCCCAGTCTTaGACACTTGTCCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARQQSQS*TLVPGK
Trigger: TTTCCCTGGGACAAGTGTTCAAGACTGGGATTGCTG...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR TCA 90 bp GAGGTTGAGGTAGCTGTAATACGGATCTCCGTACTGCAGTTTTGCTCCTATAAAACCAAAAACGTCGAGTaGACGGGCCGATTAAGGCCG +
Preference number: 4 (lower is better)
Translates to: EVEVAVIRISVLQFCSYKTKNVE*TGRLRP
Trigger: CGGCCTTAATCGGCCCGTTCACTCGACGTTTTTGGT...TTTATAGGAGCAAAACTGCAGTACGGAGATCCGTATTACAGCTACCTCAACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGATCCATGTGGCCACCTaGACACCGGACGCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWIHVAT*TPDASL
Trigger: GAGACTGGCGTCCGGTGTGCAGGTGGCCACATGGAT...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGAAACAGAGTTCCTAAGGAAAGAATCATCCTCTTTTCCTTTGATGAGCTCCTGATCCATGTGGCCACCTaGACACCGGACGCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: RNRVPKERIILFSFDELLIHVAT*TPDASL
Trigger: GAGACTGGCGTCCGGTGTGCAGGTGGCCACATGGAT...CAGGAGCTCATCAAAGGAAAAGAGGATGATTCTTTCCTTAGGAACTCTGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000430293.1
CDS-3UTR GCA 90 bp GTGTCGAACAACCCTCTTCCATTACAATCCTTAACATCTGAGAAACAGAGTTCCGAGGGGTCAGTCAAGTaGTTTAGGCTAGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: VSNNPLPLQSLTSEKQSSEGSVK*FRLGPL
Trigger: CAGCGGGCCTAGCCTAAAGCACTTGACTGACCCCTC...GGAACTCTGTTTCTCAGATGTTAAGGATTGTAATGGAAGAGGGTTGTTCGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000430293.1
CDS-3UTR GCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATGCCCGCGTCAGCTCCTaGAACGCTGCCTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHARVSS*NAAFCC
Trigger: ACAGCAAAAGGCAGCGTTGCAGGAGCTGACGCGGGC...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGAAACAGAGTTCCTAAGGAAAGAATCATCCTCTTTTCCTTTGATGAGCTCCTGGCCCGCGTCAGCTCCTaGAACGCTGCCTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RNRVPKERIILFSFDELLARVSS*NAAFCC
Trigger: ACAGCAAAAGGCAGCGTTGCAGGAGCTGACGCGGGC...CAGGAGCTCATCAAAGGAAAAGAGGATGATTCTTTCCTTAGGAACTCTGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000430293.1
CDS-3UTR GCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACATTGAAGGACTCCACGTaGGCCCGCGTCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTLKDST*ARVSSC
Trigger: GCAGGAGCTGACGCGGGCGCACGTGGAGTCCTTCAA...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AATGGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGCCTTGAAGGACTCCACGTaGGCCCGCGTCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NGKISPRHNQHSDDFFNALKDST*ARVSSC
Trigger: GCAGGAGCTGACGCGGGCGCACGTGGAGTCCTTCAA...GGCATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR GCA 90 bp TTAAGGACCTGTTTTTGTGTCGAACAACCCTCTTCCATTACAATCCTTAACATCTTGAAGGACTCCACGTaGGCCCGCGTCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LRTCFCVEQPSSITILNILKDST*ARVSSC
Trigger: GCAGGAGCTGACGCGGGCGCACGTGGAGTCCTTCAA...GATGTTAAGGATTGTAATGGAAGAGGGTTGTTCGACACAAAAACAGGTCCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000430293.1
CDS-3UTR GCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGAGGAACTCCGCAGCTTaGTCATTTGGGTACCAGTCA +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARRNSAA*SFGYQS
Trigger: TGACTGGTACCCAAATGAGCAAGCTGCGGAGTTCCT...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp TTTGCTTACCCATCTGGCATTGGTACATGTTCCGTGGACTCTGGTTGTGATCAGCCCAATGCTAAGTTCTaGACAGGCCGTACCAGTCTA +
Preference number: 4 (lower is better)
Translates to: FAYPSGIGTCSVDSGCDQPNAKF*TGRTSL
Trigger: TAGACTGGTACGGCCTGTGCAGAACTTAGCATTGGG...CTGATCACAACCAGAGTCCACGGAACATGTACCAATGCCAGATGGGTAAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp ACTACACAGAGTACAGTTGTATTTTCTGTTGCGCATGGCAGACCAAGAAGGGGGCCCAATGCTAAGTTCTaGACAGGCCGTACCAGTCTA +
Preference number: 4 (lower is better)
Translates to: TTQSTVVFSVAHGRPRRGPNAKF*TGRTSL
Trigger: TAGACTGGTACGGCCTGTGCAGAACTTAGCATTGGG...CCCCCTTCTTGGTCTGCCATGCGCAACAGAAAATACAACTGTACTCTGTGTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATTCGTCATCTAACTTCTaGAGAACGCGTGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYSSSNF*RTRGSP
Trigger: TGGTGACCCACGCGTTCTGCAGAAGTTAGATGACGA...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTCCGTACTGCAGTTTTaGTCCTATAAACGGCAATCC +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSISVLQF*SYKRQS
Trigger: GGATTGCCGTTTATAGGAGCAAAACTGCAGTACGGA...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGAAAACCATGGGGATTGAACAGAATGTCTGGGACCATCCCACTCTCAGTAAAACAGCCGGCCACAATCTaGTTAAAATGCCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GKPWGLNRMSGTIPLSVKQPATI*LKCPSA
Trigger: GGCAGAAGGGCATTTTAAGCAGATTGTGGCCGGCTG...TTTTACTGAGAGTGGGATGGTCCCAGACATTCTGTTCAATCCCCATGGTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTAGACTTGTCACCGTATaGTCTTCCATTTATCAATAT +
Preference number: 4 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVRLVTV*SSIYQY
Trigger: ATATTGATAAATGGAAGAGCATACGGTGACAAGTCT...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GCAATGGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGCTGCCAGGATCCATGTaGCCACCTGCACACCGGACG +
Preference number: 4 (lower is better)
Translates to: AMGKFLRGIINIRMTFSMLPGSM*PPAHRT
Trigger: CGTCCGGTGTGCAGGTGGCCACATGGATCCTGGCAG...CATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCCATTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR CCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGGCCTGCGTACTGTGGTaGTCCTCATCTTGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARACVLW*SSSWQN
Trigger: ATTTTGCCAAGATGAGGACCACCACAGTACGCAGGC...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGACAGGGCTCCCCGTCTaGGGTATGCACGGGACAAAG +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWTGLPV*GMHGTK
Trigger: CTTTGTCCCGTGCATACCCCAGACGGGGAGCCCTGT...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTACAGGGCTCCCCGTCTaGGGTATGCACGGGACAAAG +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTTGLPV*GMHGTK
Trigger: CTTTGTCCCGTGCATACCCCAGACGGGGAGCCCTGT...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTGTTTGCTTACCCATCTaGCATTGGTACATGTTCCGT +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIVCLPI*HWYMFR
Trigger: ACGGAACATGTACCAATGCCAGATGGGTAAGCAAAC...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp CTGCCCATGGCGACTGGCAAATTTATCTCCGATAGTTGGGTTCCGAGGCACTCTCATAATAATCATACATaGAGGGTCTCACCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: LPMATGKFISDSWVPRHSHNNHT*RVSPRD
Trigger: GTCCCTTGGTGAGACCCTCCATGTATGATTATTATG...AGAGTGCCTCGGAACCCAACTATCGGAGATAAATTTGCCAGTCGCCATGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp GTGGTCCTCATCTTGGCAAAATCAGCCCCTCTGTGCACGCAGCGGAAATGGGAGCCTTATTCACAATCATaGCATCTTCCATATCATAGC +
Preference number: 4 (lower is better)
Translates to: VVLILAKSAPLCTQRKWEPYSQS*HLPYHS
Trigger: GCTATGATATGGAAGATGCCATGATTGTGAATAAGG...CTCCCATTTCCGCTGCGTGCACAGAGGGGCTGATTTTGCCAAGATGAGGACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTTTATCTCCGATAGTTaGGTTCCGAGGCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIFISDS*VPRHSH
Trigger: ATGAGAGTGCCTCGGAACCCAACTATCGGAGATAAA...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCATTGAACAGAATGTCTaGGACCATCCCACTCTCAGT +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSIEQNV*DHPTLS
Trigger: ACTGAGAGTGGGATGGTCCCAGACATTCTGTTCAAT...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GCAATCACACTCAGCAGGCTGTGTGGAAAGAGTTCCTGGTGTGTGGTAACTCCACGGGATGGAAAACCATaGGGATTGAACAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: AITLSRLCGKSSWCVVTPRDGKP*GLNRMS
Trigger: AGACATTCTGTTCAATCCCCATGGTTTTCCATCCCG...TGGAGTTACCACACACCAGGAACTCTTTCCACACAGCCTGCTGAGTGTGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCCGGGATGGAAAACCATaGGGATTGAACAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSRDGKP*GLNRMS
Trigger: AGACATTCTGTTCAATCCCCATGGTTTTCCATCCCG...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCGCACAGCACCATGCCTaGCTTCCAAAATGGATGAAT +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPAQHHA*LPKWMN
Trigger: ATTCATCCATTTTGGAAGCCAGGCATGGTGCTGTGC...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCGACATCACCAAATGCTaGTTGGTCAGAATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSDITKC*LVRMPR
Trigger: TCTTGGCATTCTGACCAACCAGCATTTGGTGATGTC...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CCA 90 bp AGGGCTTGTGGGGGAAGGTTACGTAAGTTGCAAAGCTTGGATTTCACCATGATGGCAGATGGTCCCTTTTaGAACTGTAGGTGGACTGCA +
Preference number: 4 (lower is better)
Translates to: RACGGRLRKLQSLDFTMMADGPF*NCRWTA
Trigger: TGCAGTCCACCTACAGTTCCAAAAGGGACCATCTGC...CATCATGGTGAAATCCAAGCTTTGCAACTTACGTAACCTTCCCCCACAAGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424062.1
3UTR CAA 72 bp GGTGTGAGGACTTCCTGGTTCACCAAACTATCAGGATaGTCCTCCATGCACTCTCCTTTGGCTAAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: GVRTSWFTKLSG*SSMHSPLAKAK
Trigger: CTTTGCTTTAGCCAAAGGAGAGTGCATGGAGGACAATCCTGATAGTTTGGTGAACCAGGAAGTCCTCACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR TCA 90 bp AGCCAGCAGCCTTTAACATCTCACCAAAGTATTCTAAGGCCGAGTTCTCCTCTGCATTCACTGCCCAGTTaGTATCAGCTGTCAACTTCC +
Preference number: 4 (lower is better)
Translates to: SQQPLTSHQSILRPSSPLHSLPS*YQLSTS
Trigger: GGAAGTTGACAGCTGATATCAACTGGGCAGTGAATG...CAGAGGAGAACTCGGCCTTAGAATACTTTGGTGAGATGTTAAAGGCTGCTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR TCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTCCTCACACAGTGCATTaGAACTCCATACTGAGTATA +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIPHTVH*NSILSI
Trigger: TATACTCAGTATGGAGTTTCAATGCACTGTGTGAGG...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR TCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATAGTGGAGGTTCATATTaGCAGCGGAATGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYSGGSY*QRNVLP
Trigger: GGGAAGAACATTCCGCTGTCAATATGAACCTCCACT...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAGAGCTGACCCGGTGTaGGGACTTCCTGGTTCACCA +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHRADPV*GLPGSP
Trigger: TGGTGAACCAGGAAGTCCTCACACCGGGTCAGCTCT...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTAGAGCTGACCCGGTGTaGGGACTTCCTGGTTCACCA +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTRADPV*GLPGSP
Trigger: TGGTGAACCAGGAAGTCCTCACACCGGGTCAGCTCT...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GACACTTCCATGGGCAAAGCCTCGTTCCCAAGAGGCCTTATTCACAATCATGGCGAAACACTGGTCTTCTaGGCCTTCTTATCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: DTSMGKASFPRGLIHNHGETLVF*AFLSKA
Trigger: AGCTTTTGATAAGAAGGCTCAGAAGACCAGTGTTTC...GCCATGATTGTGAATAAGGCCTCTTGGGAACGAGGCTTTGCCCATGGAAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR TCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCCTCAACACCTTAAAATaGCGAAGAGAATCTGCGATG +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSLNTLK*RRESAM
Trigger: CATCGCAGATTCTCTTCGTCATTTTAAGGTGTTGAG...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCTTTCAGAGAGGTCTATaGACTCAGACTTGTAGACAC +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSFQRGL*TQTCRH
Trigger: GTGTCTACAAGTCTGAGTTCATAGACCTCTCTGAAA...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCCAGTTCTAGCCCACTaGTGCCACTATATAACCTCT +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYPVLAH*CHYITS
Trigger: AGAGGTTATATAGTGGCATCAGTGGGCTAGAACTGG...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGGCTACCGACCGATCTaGGCAGTTGAAGAGGCGGTC +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTGYRPI*AVEEAV
Trigger: GACCGCCTCTTCAACTGCTCAGATCGGTCGGTAGCC...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCTATGCAACTACCATATaGCCCAGCAATCCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPYATTI*PSNPSL
Trigger: AAGACTGGGATTGCTGGGTCATATGGTAGTTGCATA...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR TCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTCAGCAGACATTTCACTaGAGATACACAGATGGCAAA +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIQQTFH*RYTDGK
Trigger: TTTGCCATCTGTGTATCTTCAGTGAAATGTCTGCTG...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR TCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACCCTCACACAGTGCATTaGAACTCCTGCACCGCGAGG +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNPHTVH*NSCTAR
Trigger: CCTCGCGGTGCAGGAGTTTCAATGCACTGTGTGAGG...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537335.5
CDS-3UTR TCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCTGCCGGGCCCCGGGCTaGCTCTCTACCCAACTCCTA +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFCRAPG*LSTQLL
Trigger: TAGGAGTTGGGTAGAGAGTCAGCCCGGGGCCCGGCA...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537335.5
CDS-3UTR GCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTGAGGGGTCAGTCAAGTaGTTTAGGCTAGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTEGSVK*FRLGPL
Trigger: CAGCGGGCCTAGCCTAAAGCACTTGACTGACCCCTC...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp TGTAAGAAATCACAGCAACGATGGCATTGGTCCCAATTGGATAGTTATCCATGTGAGGGGTCAGTCAAGTaGTTTAGGCTAGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: CKKSQQRWHWSQLDSYPCEGSVK*FRLGPL
Trigger: CAGCGGGCCTAGCCTAAAGCACTTGACTGACCCCTC...ACATGGATAACTATCCAATTGGGACCAATGCCATCGTTGCTGTGATTTCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp ACGATACAGTTTGTTATCCGATCGGTCTTGATAAGTGAGAAGTGGAAAGCCCATTGCAACGCTGCCTTTTaGTGTTCCCGCGGGATTCCA +
Preference number: 4 (lower is better)
Translates to: TIQFVIRSVLISEKWKAHCNAAF*CSRGIP
Trigger: TGGAATCCCGCGGGAACAGCAAAAGGCAGCGTTGCA...ATGGGCTTTCCACTTCTCACTTATCAAGACCGATCGGATAACAAACTGTATCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGCCCGCGTCAGCTCCTaGAACGCTGCCTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTARVSS*NAAFCC
Trigger: ACAGCAAAAGGCAGCGTTGCAGGAGCTGACGCGGGC...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCAGCCCGCGTCAGCTCCTaGAACGCTGCCTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSARVSS*NAAFCC
Trigger: ACAGCAAAAGGCAGCGTTGCAGGAGCTGACGCGGGC...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GTGTCGAACAACCCTCTTCCATTACAATCCTTAACATCTGAGAAACAGAGTTCCTCTGCCTCCTCATGGTaGTCAATGAGGGCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: VSNNPLPLQSLTSEKQSSSASSW*SMRACG
Trigger: CCCACAAGCCCTCATTGAGCACCATGAGGAGGCAGA...GGAACTCTGTTTCTCAGATGTTAAGGATTGTAATGGAAGAGGGTTGTTCGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR GCA 90 bp GTAAAAAGGAACAATCCTGGGTACAGACTTGGTTTTCCTGTCATGGGTATAAGGAAATCAGCCCCTCTGTaGACGCAGCGGAAATGGGAG +
Preference number: 4 (lower is better)
Translates to: VKRNNPGYRLGFPVMGIRKSAPL*TQRKWE
Trigger: CTCCCATTTCCGCTGCGTGCACAGAGGGGCTGATTT...CCTTATACCCATGACAGGAAAACCAAGTCTGTACCCAGGATTGTTCCTTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR GCA 90 bp AGAAACAGAGTTCCTAAGGAAAGAATCATCCTCTTTTCCTTTGATGAGCTCCTGACTCTGGCAGCAGCCTaGGTACTGTGGTGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RNRVPKERIILFSFDELLTLAAA*VLWWSS
Trigger: TGAGGACCACCACAGTACGCAGGCTGCTGCCAGAGT...CAGGAGCTCATCAAAGGAAAAGAGGATGATTCTTTCCTTAGGAACTCTGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR GCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACACTCTGGCAGCAGCCTaGGTACTGTGGTGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNTLAAA*VLWWSS
Trigger: TGAGGACCACCACAGTACGCAGGCTGCTGCCAGAGT...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGACTCTGGCAGCAGCCTaGGTACTGTGGTGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWTLAAA*VLWWSS
Trigger: TGAGGACCACCACAGTACGCAGGCTGCTGCCAGAGT...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp TTAAGGACCTGTTTTTGTGTCGAACAACCCTCTTCCATTACAATCCTTAACATCTCCCCGTCTGGGGTATaGACGGGACAAAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: LRTCFCVEQPSSITILNISPSGV*TGQRKP
Trigger: GGGCTTCCTTTGTCCCGTGCATACCCCAGACGGGGA...GATGTTAAGGATTGTAATGGAAGAGGGTTGTTCGACACAAAAACAGGTCCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR GCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGATGACGAAGAGAATCTaGGATGCCTGGAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARMTKRI*DAWSKI
Trigger: GATCTTGCTCCAGGCATCGCAGATTCTCTTCGTCAT...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp ACTACACAGAGTACAGTTGTATTTTCTGTTGCGCATGGCAGACCAAGAAGGGGGCTTAAAATGCCCTTCTaGCCATGGCGACTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: TTQSTVVFSVAHGRPRRGLKMPF*PWRLAN
Trigger: ATTTGCCAGTCGCCATGGGCAGAAGGGCATTTTAAG...CCCCCTTCTTGGTCTGCCATGCGCAACAGAAAATACAACTGTACTCTGTGTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp CTTCCATGGGCAAAGCCTCGTTCCCAAGAGGCCTTATTCACAATCATGGCATCTGTGGAGAGAGTAAACTaGCACACTTCACACACACAT +
Preference number: 4 (lower is better)
Translates to: LPWAKPRSQEALFTIMASVERVN*HTSHTH
Trigger: ATGTGTGTGTGAAGTGTGGCAGTTTACTCTCTCCAC...AGATGCCATGATTGTGAATAAGGCCTCTTGGGAACGAGGCTTTGCCCATGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGAGATGCACAGCACCATaGCTGGCTTCCAAAATGGAT +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARRCTAP*LASKMD
Trigger: ATCCATTTTGGAAGCCAGGCATGGTGCTGTGCATCT...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAAAGCAGGGACTATAGATaGACAGCACCATGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQSRDYR*TAPCLA
Trigger: AGCCAGGCATGGTGCTGTGCATCTATAGTCCCTGCT...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTAAGTGGCGTGAGCCACTaGGCCCATCCTGCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVSGVSH*AHPAKP
Trigger: AGGCTTAGCAGGATGGGCGCAGTGGCTCACGCCACT...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR GCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTGCCAGTTTTGCTTTATaGAGTTTCAGTTACCCACAG +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIASFAL*SFSYPQ
Trigger: CTGTGGGTAACTGAAACTGCATAAAGCAAAACTGGC...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR GCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCGCACCCAGCCAGTTTTaGTTTATGCAGTTTCAGTTA +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSAPSQF*FMQFQL
Trigger: TAACTGAAACTGCATAAAGCAAAACTGGCTGGGTGC...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CCA 90 bp AGCCAGCAGCCTTTAACATCTCACCAAAGTATTCTAAGGCCGAGTTCTCCTCTGGCAGATGGTCCCTTTTaGAACTGTAGGTGGACTGAT +
Preference number: 4 (lower is better)
Translates to: SQQPLTSHQSILRPSSPLADGPF*NCRWTD
Trigger: ATCAGTCCACCTACAGTTCCAAAAGGGACCATCTGC...CAGAGGAGAACTCGGCCTTAGAATACTTTGGTGAGATGTTAAAGGCTGCTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp TGTAGACACTTCCATGGGCAAAGCCTCGTTCCCAAGAGGCCTTATTCACAATCACTGCTGGATAAACATTaGCCTCTTTGCAGATGGTCC +
Preference number: 4 (lower is better)
Translates to: CRHFHGQSLVPKRPYSQSLLDKH*PLCRWS
Trigger: GGACCATCTGCAAAGAGGCCAATGTTTATCCAGCAG...TGATTGTGAATAAGGCCTCTTGGGAACGAGGCTTTGCCCATGGAAGTGTCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp GGAAAACCATGGGGATTGAACAGAATGTCTGGGACCATCCCACTCTCAGTAAAAGCCCCGGCATTCTGCTaGATAAACATTGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GKPWGLNRMSGTIPLSVKAPAFC*INIGLF
Trigger: AAAGAGGCCAATGTTTATCCAGCAGAATGCCGGGGC...TTTTACTGAGAGTGGGATGGTCCCAGACATTCTGTTCAATCCCCATGGTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATGGTGTGAGGACTTCCTaGTTCACCAAACTATCAGGA +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYGVRTS*FTKLSG
Trigger: TCCTGATAGTTTGGTGAACCAGGAAGTCCTCACACC...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATAGAATCTGCGATGCCTaGAGCAAGATCCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYRICDA*SKILIH
Trigger: GTGGATAAGGATCTTGCTCCAGGCATCGCAGATTCT...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGCCAGCAGCCTTTAACATCTCACCAAAGTATTCTAAGGCCGAGTTCTCCTCTGAGAATCTGCGATGCCTaGAGCAAGATCCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: SQQPLTSHQSILRPSSPLRICDA*SKILIH
Trigger: GTGGATAAGGATCTTGCTCCAGGCATCGCAGATTCT...CAGAGGAGAACTCGGCCTTAGAATACTTTGGTGAGATGTTAAAGGCTGCTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCTCCTGGGTACAGACTTaGTTTTCCTGTCATGGGTAT +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPSWVQT*FSCHGY
Trigger: ATACCCATGACAGGAAAACCAAGTCTGTACCCAGGA...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATTTACCCATCTGGCATTaGTACATGTTCCGTGGACTC +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYLPIWH*YMFRGL
Trigger: GAGTCCACGGAACATGTACCAATGCCAGATGGGTAA...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCAAATCACAGCAACGATaGCATTGGTCCCAATTGGAT +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSKSQQR*HWSQLD
Trigger: ATCCAATTGGGACCAATGCCATCGTTGCTGTGATTT...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp CACTTCACACACACATGGGCTACCGACCGATCTGAGCAGTTGAAGAGGCGGTCACCTTATTCACAATCATaGCATCTTCCATATCATAGC +
Preference number: 4 (lower is better)
Translates to: HFTHTWATDRSEQLKRRSPYSQS*HLPYHS
Trigger: GCTATGATATGGAAGATGCCATGATTGTGAATAAGG...TGACCGCCTCTTCAACTGCTCAGATCGGTCGGTAGCCCATGTGTGTGTGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCATTGAACAGAATGTCTaGGACCATCCCACTCTCAGT +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPIEQNV*DHPTLS
Trigger: ACTGAGAGTGGGATGGTCCCAGACATTCTGTTCAAT...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAAACGGATTCCACCCTaGACATTTCTTCCCCCAATA +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPKRIPP*TFLPPI
Trigger: TATTGGGGGAAGAAATGTCCAGGGTGGAATCCGTTT...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TGTCATAATAATCATACATGGAGGGTCTCACCAAGGGACTCTGAGGAGTCTGAAAGACCAAGAAGGGGGTaGCTTCTCCAACAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: CHNNHTWRVSPRDSEESERPRRG*LLQQWR
Trigger: TCTCCACTGTTGGAGAAGCCACCCCCTTCTTGGTCT...TTCAGACTCCTCAGAGTCCCTTGGTGAGACCCTCCATGTATGATTATTATGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCGTGTGTGAAAGTGTGTaGTTGGGATTCTTAACAGCA +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSVCESV*LGFLTA
Trigger: TGCTGTTAAGAATCCCAACCACACACTTTCACACAC...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTCTGGTCCAAGTGCAATaGTGTTGCAACAAATTGATC +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSILVQVQ*CCNKLI
Trigger: GATCAATTTGTTGCAACACCATTGCACTTGGACCAG...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR TCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCACGTGCACAGCGTAGTTaGAGGACTCCACGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSRAQRS*RTPRAP
Trigger: GGGCGCACGTGGAGTCCTTCAACTACGCTGTGCACG...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TGCTCAATGAGGGCTTGTGGGGGAAGGTTACGTAAGTTGCAAAGCTTGGATTTCGCTTGGATTTCACCATaGTGGGAACATAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: CSMRACGGRLRKLQSLDFAWISP*WEHSQE
Trigger: TTCTTGGCTATGTTCCCATCATGGTGAAATCCAAGC...GAAATCCAAGCTTTGCAACTTACGTAACCTTCCCCCACAAGCCCTCATTGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR TCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCCCTCACACAGTGCATTaGAACTCCATACTGAGTATA +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPPHTVH*NSILSI
Trigger: TATACTCAGTATGGAGTTTCAATGCACTGTGTGAGG...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR TCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCACAATCCTTAACATCTaGGAAACAGAGTTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSTILNI*ETEFLR
Trigger: CCTTAGGAACTCTGTTTCTCAGATGTTAAGGATTGT...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ACTTTCCCCGGTGTTGAGGTTGAGGTAGCTGTAATACGGATCTCCGTACTGCAGACAATCCTTAACATCTaGGAAACAGAGTTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: TFPGVEVEVAVIRISVLQTILNI*ETEFLR
Trigger: CCTTAGGAACTCTGTTTCTCAGATGTTAAGGATTGT...CTGCAGTACGGAGATCCGTATTACAGCTACCTCAACCTCAACACCGGGGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR TCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTAGAGCTTTCGCGTCATaGGACAAAGCATATAAAACT +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIRAFAS*DKAYKT
Trigger: AGTTTTATATGCTTTGTCTCATGACGCGAAAGCTCT...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAAGAGCTGACCCGGTGTaGGGACTTCCTGGTTCACCA +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIRADPV*GLPGSP
Trigger: TGGTGAACCAGGAAGTCCTCACACCGGGTCAGCTCT...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ACGATACAGTTTGTTATCCGATCGGTCTTGATAAGTGAGAAGTGGAAAGCCCATAACATAAGGAAGAGCTaGCCCGGTGTGAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: TIQFVIRSVLISEKWKAHNIRKS*PGVRTS
Trigger: GGAAGTCCTCACACCGGGTCAGCTCTTCCTTATGTT...ATGGGCTTTCCACTTCTCACTTATCAAGACCGATCGGATAACAAACTGTATCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR TCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGTATACACAAACTGTGTaGCAACCTCACATACGGCAG +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARYTQTV*QPHIRQ
Trigger: CTGCCGTATGTGAGGTTGTCACACAGTTTGTGTATA...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TGTAAGAAATCACAGCAACGATGGCATTGGTCCCAATTGGATAGTTATCCATGTGTAGCACTCACTGTATaGTCGGTGGGGAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: CKKSQQRWHWSQLDSYPCVALTV*SVGSSI
Trigger: GATGGAGCTCCCCACCGATCATACAGTGAGTGCTAC...ACATGGATAACTATCCAATTGGGACCAATGCCATCGTTGCTGTGATTTCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR TCA 90 bp CCATGGCGACTGGCAAATTTATCTCCGATAGTTGGGTTCCGAGGCACTCTCATATTTCAGAGAGGTCTATaGACTCAGACTTGTAGACAC +
Preference number: 4 (lower is better)
Translates to: PWRLANLSPIVGFRGTLIFQRGL*TQTCRH
Trigger: GTGTCTACAAGTCTGAGTTCATAGACCTCTCTGAAA...TATGAGAGTGCCTCGGAACCCAACTATCGGAGATAAATTTGCCAGTCGCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR TCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGGTGGGTCACCAGGTTTaGTGCCAAACACCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWVGHQV*CQTPGY
Trigger: GTAGCCTGGTGTTTGGCATCAAACCTGGTGACCCAC...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATGTGGGTCACCAGGTTTaGTGCCAAACACCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHVGHQV*CQTPGY
Trigger: GTAGCCTGGTGTTTGGCATCAAACCTGGTGACCCAC...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTGGCCGAGTTCTCCTCTaGGAAGATGAAGGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTGRVLL*EDEGCS
Trigger: GCTACACCCTTCATCTTCTCAGAGGAGAACTCGGCC...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATGGCCGAGTTCTCCTCTaGGAAGATGAAGGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHGRVLL*EDEGCS
Trigger: GCTACACCCTTCATCTTCTCAGAGGAGAACTCGGCC...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGAGAAAAGATGTACCATaGGCTAAAAGCGCATCCCGT +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARRKDVP*AKSASR
Trigger: ACGGGATGCGCTTTTAGCTCATGGTACATCTTTTCT...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TTTGCTCCTATAAACGGCAATCCATCGTCATCTAACTTCTGCAGAACGCGTGGGAGAAAAGATGTACCATaGGCTAAAAGCGCATCCCGT +
Preference number: 4 (lower is better)
Translates to: FAPINGNPSSSNFCRTRGRKDVP*AKSASR
Trigger: ACGGGATGCGCTTTTAGCTCATGGTACATCTTTTCT...CCCACGCGTTCTGCAGAAGTTAGATGACGATGGATTGCCGTTTATAGGAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR TCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATGGTGGGTGGATCACTTaGGGTCAGGGTCTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHGGWIT*GQGLQD
Trigger: GTCTTGAAGACCCTGACCTCAAGTGATCCACCCACC...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCGGGGACTATTATACCTaGTTGTTCAGATCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSGDYYT*LFRSAL
Trigger: TAAAGCTGATCTGAACAATCAGGTATAATAGTCCCC...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR TCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCCAGTTACCCACAGTCTaGAAATATGTGAGAACAGTA +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSQLPTV*KYVRTV
Trigger: TACTGTTCTCACATATTTTCAGACTGTGGGTAACTG...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR TCA 90 bp TGTAAGAAATCACAGCAACGATGGCATTGGTCCCAATTGGATAGTTATCCATGTTTGAGCTCAGGAGTTTaGGACCAGGCTGGGCCACAT +
Preference number: 4 (lower is better)
Translates to: CKKSQQRWHWSQLDSYPCLSSGV*DQAGPH
Trigger: ATGTGGCCCAGCCTGGTCTCAAACTCCTGAGCTCAA...ACATGGATAACTATCCAATTGGGACCAATGCCATCGTTGCTGTGATTTCTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR TCA 90 bp TTAAGGACCTGTTTTTGTGTCGAACAACCCTCTTCCATTACAATCCTTAACATCCCTCACACAGTGCATTaGAACTCCTGCACCGCGAGG +
Preference number: 4 (lower is better)
Translates to: LRTCFCVEQPSSITILNIPHTVH*NSCTAR
Trigger: CCTCGCGGTGCAGGAGTTTCAATGCACTGTGTGAGG...GATGTTAAGGATTGTAATGGAAGAGGGTTGTTCGACACAAAAACAGGTCCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430293.1
CDS-3UTR GCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTAGAGGGGTCAGTCAAGTaGTTTAGGCTAGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVEGSVK*FRLGPL
Trigger: CAGCGGGCCTAGCCTAAAGCACTTGACTGACCCCTC...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAGAGGGGTCAGTCAAGTaGTTTAGGCTAGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIEGSVK*FRLGPL
Trigger: CAGCGGGCCTAGCCTAAAGCACTTGACTGACCCCTC...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCAGAGGGGTCAGTCAAGTaGTTTAGGCTAGGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSEGSVK*FRLGPL
Trigger: CAGCGGGCCTAGCCTAAAGCACTTGACTGACCCCTC...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGAAACAGAGTTCCTAAGGAAAGAATCATCCTCTTTTCCTTTGATGAGCTCCTGTGCAACGCTGCCTTTTaGTGTTCCCGCGGGATTCCA +
Preference number: 4 (lower is better)
Translates to: RNRVPKERIILFSFDELLCNAAF*CSRGIP
Trigger: TGGAATCCCGCGGGAACAGCAAAAGGCAGCGTTGCA...CAGGAGCTCATCAAAGGAAAAGAGGATGATTCTTTCCTTAGGAACTCTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000430293.1
CDS-3UTR GCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTCGGCCCCGGCATTCTaGTGGATAAACATTGGCCTC +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWSAPAF*WINIGL
Trigger: GAGGCCAATGTTTATCCAGCAGAATGCCGGGGCCGA...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR GCA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCGAAGGTTACGTAAGTTaGAAAGCTTGGATTTCACCA +
Preference number: 4 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSEGYVS*KAWISP
Trigger: TGGTGAAATCCAAGCTTTGCAACTTACGTAACCTTC...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR GCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTCTGCCTCCTCATGGTaGTCAATGAGGGCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWSASSW*SMRACG
Trigger: CCCACAAGCCCTCATTGAGCACCATGAGGAGGCAGA...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR GCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAACTCTGGCAGCAGCCTaGGTACTGTGGTGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFITLAAA*VLWWSS
Trigger: TGAGGACCACCACAGTACGCAGGCTGCTGCCAGAGT...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp TTTGCTCCTATAAACGGCAATCCATCGTCATCTAACTTCTGCAGAACGCGTGGGGAAGAGAATCTGCGATaGCTGGAGCAAGATCCTTAT +
Preference number: 4 (lower is better)
Translates to: FAPINGNPSSSNFCRTRGEENLR*LEQDPY
Trigger: ATAAGGATCTTGCTCCAGGCATCGCAGATTCTCTTC...CCCACGCGTTCTGCAGAAGTTAGATGACGATGGATTGCCGTTTATAGGAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp GGAAAACCATGGGGATTGAACAGAATGTCTGGGACCATCCCACTCTCAGTAAAAGGAAAGCCCATAGTTTaGTTACCCATCTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: GKPWGLNRMSGTIPLSVKGKPIV*LPIWHW
Trigger: CCAATGCCAGATGGGTAAGCAAACTATGGGCTTTCC...TTTTACTGAGAGTGGGATGGTCCCAGACATTCTGTTCAATCCCCATGGTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp TCAGACACTCACTGGGAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTAGAGACCATGCAAAGCTaGAGACTTCCCGGCCATACT +
Preference number: 4 (lower is better)
Translates to: SDTHWESWDIIFKDKGGLETMQS*RLPGHT
Trigger: AGTATGGCCGGGAAGTCTGCAGCTTTGCATGGTCTC...TAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTCCCAGTGAGTGTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR GCA 90 bp GGACCTGTTTTTGTGTCGAACAACCCTCTTCCATTACAATCCTTAACATCTGAGGAGACCATGCAAAGCTaGAGACTTCCCGGCCATACT +
Preference number: 4 (lower is better)
Translates to: GPVFVSNNPLPLQSLTSEETMQS*RLPGHT
Trigger: AGTATGGCCGGGAAGTCTGCAGCTTTGCATGGTCTC...CTCAGATGTTAAGGATTGTAATGGAAGAGGGTTGTTCGACACAAAAACAGGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR GCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGGTGGAGAGAGTAAACTaGCACACTTCACACACACAT +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARVERVN*HTSHTH
Trigger: ATGTGTGTGTGAAGTGTGGCAGTTTACTCTCTCCAC...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTCAAGTGCAATGGTGTTaGAACAAATTGATCACAACC +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIQVQWC*NKLITT
Trigger: GGTTGTGATCAATTTGTTGCAACACCATTGCACTTG...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR GCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCACCCGCTCGCGAAAGATaGCGCAGGTGGAAACCCGCT +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSPARER*RRWKPA
Trigger: AGCGGGTTTCCACCTGCGGCATCTTTCGCGAGCGGG...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000537335.5
CDS-3UTR GCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGCCCGCTCGCGAAAGATaGCGCAGGTGGAAACCCGCT +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWPARER*RRWKPA
Trigger: AGCGGGTTTCCACCTGCGGCATCTTTCGCGAGCGGG...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000537335.5
CDS-3UTR CCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTGTCTTATCATTGCAATaGGAAAATTTCTCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIVLSLQ*ENFSEA
Trigger: TGCCTCGGAGAAATTTTCCCATTGCAATGATAAGAC...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR CCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTGTTCATGGAAACACTaGTCTTCTGAGCCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSICSWKH*SSEPSY
Trigger: ATAAGAAGGCTCAGAAGACCAGTGTTTCCATGAACA...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTGCAGCCTGCGTACTGTaGTGGTCCTCATCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTAACVL*WSSSWQ
Trigger: TTGCCAAGATGAGGACCACCACAGTACGCAGGCTGC...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATTCCTGGGTACAGACTTaGTTTTCCTGTCATGGGTAT +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYSWVQT*FSCHGY
Trigger: ATACCCATGACAGGAAAACCAAGTCTGTACCCAGGA...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTAAAAAGGAACAATCCTaGGTACAGACTTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIKKEQS*VQTWFS
Trigger: GGAAAACCAAGTCTGTACCCAGGATTGTTCCTTTTT...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAAACTCAGCAGGCTGTGTaGAAAGAGTTCCTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQTQQAV*KEFLVC
Trigger: ACACACCAGGAACTCTTTCCACACAGCCTGCTGAGT...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATGTTTGCTTACCCATCTaGCATTGGTACATGTTCCGT +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYVCLPI*HWYMFR
Trigger: ACGGAACATGTACCAATGCCAGATGGGTAAGCAAAC...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTGGCATTGGTCCCAATTaGATAGTTATCCATGTCATA +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIGIGPN*IVIHVI
Trigger: TATGACATGGATAACTATCCAATTGGGACCAATGCC...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTCTTCTGCAGAACGCGTaGGTCACCAGGTTTGATGCC +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTLLQNA*VTRFDA
Trigger: GGCATCAAACCTGGTGACCCACGCGTTCTGCAGAAG...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGCTTCTGCAGAACGCGTaGGTCACCAGGTTTGATGCC +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWLLQNA*VTRFDA
Trigger: GGCATCAAACCTGGTGACCCACGCGTTCTGCAGAAG...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TACAGACTTGGTTTTCCTGTCATGGGTATAAGGACCACTTCCATCCAGGGAGGAAATGGTCATGCGGGATaGAAAACCATGGGGATTGAA +
Preference number: 4 (lower is better)
Translates to: YRLGFPVMGIRTTSIQGGNGHAG*KTMGIE
Trigger: TTCAATCCCCATGGTTTTCCATCCCGCATGACCATT...TCCTCCCTGGATGGAAGTGGTCCTTATACCCATGACAGGAAAACCAAGTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATAATGGTCATGCGGGATaGAAAACCATGGGGATTGAA +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYNGHAG*KTMGIE
Trigger: TTCAATCCCCATGGTTTTCCATCCCGCATGACCATT...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TCAGACACTCACTGGGAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTAAGACCAAGAAGGGGGTaGCTTCTCCAACAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SDTHWESWDIIFKDKGGLRPRRG*LLQQWR
Trigger: TCTCCACTGTTGGAGAAGCCACCCCCTTCTTGGTCT...TAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTCCCAGTGAGTGTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATAATAGACCTCAGCTGTaGGATCATTCAGTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYNRPQL*DHSVAR
Trigger: TCTGGCTACTGAATGATCCCACAGCTGAGGTCTATT...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CCA 90 bp GACTACACAGAGTACAGTTGTATTTTCTGTTGCGCATGGCAGACCAAGAAGGGGTGTAATCCCAATATTTaGGAGACCGAGAGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: DYTEYSCIFCCAWQTKKGCNPNI*ETERGG
Trigger: TCCTCCTCTCTCGGTCTCCCAAATATTGGGATTACA...CCCCTTCTTGGTCTGCCATGCGCAACAGAAAATACAACTGTACTCTGTGTAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CAA 72 bp AGAAGGGTGGTTGCTAGGGGCCAGGGAAATGGAGAGTaGTTCAACAGGTATAAAGCTTCAGTTATGCAAGAC +
Preference number: 4 (lower is better)
Translates to: RRVVARGQGNGE*FNRYKASVMQD
Trigger: GTCTTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCTAGCAACCACCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR CAA 72 bp TCATCTAACTTCTGCAGAACGCGTGGGTCACCAGGTTaGATGCCAAACACCAGGCTACTATCTCCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: SSNFCRTRGSPG*MPNTRLLSPCL
Trigger: TAAACAAGGAGATAGTAGCCTGGTGTTTGGCATCAAACCTGGTGACCCACGCGTTCTGCAGAAGTTAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CAA 72 bp GGGTTCCGAGGCACTCTCATAGTGATGCAAACACACTaGAATTTTCCACTCCCAGTGTCATTACTGCACACT +
Preference number: 4 (lower is better)
Translates to: GFRGTLIVMQTH*NFPLPVSLLHT
Trigger: AGTGTGCAGTAATGACACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCACTATGAGAGTGCCTCGGAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
3UTR CAA 72 bp GTATCGATAGTGTCACTGCGACTACACAGAGTACAGTaGTATTTTCTGTTGCGCATGGCAGACCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: VSIVSLRLHRVQ*YFLLRMADQEG
Trigger: CCCTTCTTGGTCTGCCATGCGCAACAGAAAATACAACTGTACTCTGTGTAGTCGCAGTGACACTATCGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR TCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCACAATCCTTAACATCTaGGAAACAGAGTTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPTILNI*ETEFLR
Trigger: CCTTAGGAACTCTGTTTCTCAGATGTTAAGGATTGT...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGAACATAAGGAAGAGCTaGCCCGGTGTGAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWNIRKS*PGVRTS
Trigger: GGAAGTCCTCACACCGGGTCAGCTCTTCCTTATGTT...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAACATAAGGAAGAGCTaGCCCGGTGTGAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHNIRKS*PGVRTS
Trigger: GGAAGTCCTCACACCGGGTCAGCTCTTCCTTATGTT...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAACATAAGGAAGAGCTaGCCCGGTGTGAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNNIRKS*PGVRTS
Trigger: GGAAGTCCTCACACCGGGTCAGCTCTTCCTTATGTT...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATGGGAGAGGTAGCGTATaGAGTTCAGCTTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHGRGSV*SSACQP
Trigger: TGGCTGACAAGCTGAACTTCATACGCTACCTCTCCC...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTGGGAGAGGTAGCGTATaGAGTTCAGCTTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTGRGSV*SSACQP
Trigger: TGGCTGACAAGCTGAACTTCATACGCTACCTCTCCC...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGTGGGTCACCAGGTTTaGTGCCAAACACCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTVGHQV*CQTPGY
Trigger: GTAGCCTGGTGTTTGGCATCAAACCTGGTGACCCAC...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGGCCGAGTTCTCCTCTaGGAAGATGAAGGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTGRVLL*EDEGCS
Trigger: GCTACACCCTTCATCTTCTCAGAGGAGAACTCGGCC...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp CCATGGCGACTGGCAAATTTATCTCCGATAGTTGGGTTCCGAGGCACTCTCATACCAGTTGTCCTTACTTaGAATTTGTCTGAGACCATA +
Preference number: 4 (lower is better)
Translates to: PWRLANLSPIVGFRGTLIPVVLT*NLSETI
Trigger: TATGGTCTCAGACAAATTTCAAGTAAGGACAACTGG...TATGAGAGTGCCTCGGAACCCAACTATCGGAGATAAATTTGCCAGTCGCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR TCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAGGCTACCGACCGATCTaGGCAGTTGAAGAGGCGGTC +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSGYRPI*AVEEAV
Trigger: GACCGCCTCTTCAACTGCTCAGATCGGTCGGTAGCC...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACGGATTAACAGGTGTGTaGCACTCACTGCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNGLTGV*HSLPAE
Trigger: CTCAGCAGGCAGTGAGTGTCACACACCTGTTAATCC...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATGGAAACTTGTGGAGATaGCAGGTATGTTTATTACCC +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYGNLWR*QVCLLP
Trigger: GGGTAATAAACATACCTGTCATCTCCACAAGTTTCC...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGGGAAACTTGTGGAGATaGCAGGTATGTTTATTACCC +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARGNLWR*QVCLLP
Trigger: GGGTAATAAACATACCTGTCATCTCCACAAGTTTCC...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTATTATACCTGATTGTTCCCACCTCAGCCTCCTaGGTAGCTGGAACTACAGGC +
Preference number: 4 (lower is better)
Translates to: ESWDIIFKDKGGLLYLIVPTSAS*VAGTTG
Trigger: GCCTGTAGTTCCAGCTACTCAGGAGGCTGAGGTGGG...AACAATCAGGTATAATAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR TCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGATGGCACAGCCACTCTaGAAAGTTTGGCAGTTTATT +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARMAQPL*KVWQFI
Trigger: AATAAACTGCCAAACTTTTCAGAGTGGCTGTGCCAT...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR TCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAACCAAAAACGTCGAGTaGACGGGCCGATTAAGGCCG +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTTKNVE*TGRLRP
Trigger: CGGCCTTAATCGGCCCGTTCACTCGACGTTTTTGGT...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333990.10
ENST00000409894.7
ENST00000448770.5
ENST00000537335.5
CDS-3UTR TCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATACATTCACTGCCCAGTTaGTATCAGCCTGCACCGCGA +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIHSLPS*YQPAPR
Trigger: TCGCGGTGCAGGCTGATATCAACTGGGCAGTGAATG...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417433.6
CDS-3UTR GCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGATCCATGTGGCCACCTaGACACCGGACGCCAGTCTC +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWIHVAT*TPDASL
Trigger: GAGACTGGCGTCCGGTGTGCAGGTGGCCACATGGAT...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp TTAAGGACCTGTTTTTGTGTCGAACAACCCTCTTCCATTACAATCCTTAACATCTGCAACGCTGCCTTTTaGTGTTCCCGCGGGATTCCA +
Preference number: 4 (lower is better)
Translates to: LRTCFCVEQPSSITILNICNAAF*CSRGIP
Trigger: TGGAATCCCGCGGGAACAGCAAAAGGCAGCGTTGCA...GATGTTAAGGATTGTAATGGAAGAGGGTTGTTCGACACAAAAACAGGTCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000430293.1
CDS-3UTR GCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACATGCAACGCTGCCTTTTaGTGTTCCCGCGGGATTCCA +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTCNAAF*CSRGIP
Trigger: TGGAATCCCGCGGGAACAGCAAAAGGCAGCGTTGCA...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AATGGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGCCTGCAACGCTGCCTTTTaGTGTTCCCGCGGGATTCCA +
Preference number: 4 (lower is better)
Translates to: NGKISPRHNQHSDDFFNACNAAF*CSRGIP
Trigger: TGGAATCCCGCGGGAACAGCAAAAGGCAGCGTTGCA...GGCATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR GCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCATCTGCCTCCTCATGGTaGTCAATGAGGGCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSSASSW*SMRACG
Trigger: CCCACAAGCCCTCATTGAGCACCATGAGGAGGCAGA...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR GCA 90 bp GCAATGGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGTCTGCCTCCTCATGGTaGTCAATGAGGGCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: AMGKFLRGIINIRMTFSMSASSW*SMRACG
Trigger: CCCACAAGCCCTCATTGAGCACCATGAGGAGGCAGA...CATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCCATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR GCA 90 bp GAGGTTGAGGTAGCTGTAATACGGATCTCCGTACTGCAGTTTTGCTCCTATAAACAGGATTGTCCTCCATaGACTCTCCTTTGGCTAAAG +
Preference number: 4 (lower is better)
Translates to: EVEVAVIRISVLQFCSYKQDCPP*TLLWLK
Trigger: CTTTAGCCAAAGGAGAGTGCATGGAGGACAATCCTG...TTTATAGGAGCAAAACTGCAGTACGGAGATCCGTATTACAGCTACCTCAACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR GCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCAAAATCAGCCCCTCTGTaGACGCAGCGGAAATGGGAG +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSKSAPL*TQRKWE
Trigger: CTCCCATTTCCGCTGCGTGCACAGAGGGGCTGATTT...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCTCCCCGTCTGGGGTATaGACGGGACAAAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFSPSGV*TGQRKP
Trigger: GGGCTTCCTTTGTCCCGTGCATACCCCAGACGGGGA...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGTCCCCGTCTGGGGTATaGACGGGACAAAGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWSPSGV*TGQRKP
Trigger: GGGCTTCCTTTGTCCCGTGCATACCCCAGACGGGGA...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp TGTCATAATAATCATACATGGAGGGTCTCACCAAGGGACTCTGAGGAGTCTGAAATGACGAAGAGAATCTaGGATGCCTGGAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: CHNNHTWRVSPRDSEESEMTKRI*DAWSKI
Trigger: GATCTTGCTCCAGGCATCGCAGATTCTCTTCGTCAT...TTCAGACTCCTCAGAGTCCCTTGGTGAGACCCTCCATGTATGATTATTATGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTCAGCCGGCCACAATCTaGTTAAAATGCCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTQPATI*LKCPSA
Trigger: GGCAGAAGGGCATTTTAAGCAGATTGTGGCCGGCTG...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGCAGCCGGCCACAATCTaGTTAAAATGCCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWQPATI*LKCPSA
Trigger: GGCAGAAGGGCATTTTAAGCAGATTGTGGCCGGCTG...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATGAGACCATGCAAAGCTaGAGACTTCCCGGCCATACT +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHETMQS*RLPGHT
Trigger: AGTATGGCCGGGAAGTCTGCAGCTTTGCATGGTCTC...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCTATATAACCTCTCGGTaGCATAGAAATTGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPYITSR*HRNCSQ
Trigger: CTGGCTACAATTTCTATGGCACCGAGAGGTTATATA...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp CACTTCCATGGGCAAAGCCTCGTTCCCAAGAGGCCTTATTCACAATCATGGCATTATATAACCTCTCGGTaGCATAGAAATTGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: HFHGQSLVPKRPYSQSWHYITSR*HRNCSQ
Trigger: CTGGCTACAATTTCTATGGCACCGAGAGGTTATATA...ATGCCATGATTGTGAATAAGGCCTCTTGGGAACGAGGCTTTGCCCATGGAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATAGTTGTATTTTCTGTTaGGCATGGCAGACCAAGAAG +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYSCIFC*AWQTKK
Trigger: CTTCTTGGTCTGCCATGCGCAACAGAAAATACAACT...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGACCATGCAAAGCTGCAGACTTCCCGGCCATACTCTCAATTAACATCCCAATGAGTTGTATTTTCTGTTaGGCATGGCAGACCAAGAAG +
Preference number: 4 (lower is better)
Translates to: RPCKAADFPAILSINIPMSCIFC*AWQTKK
Trigger: CTTCTTGGTCTGCCATGCGCAACAGAAAATACAACT...CATTGGGATGTTAATTGAGAGTATGGCCGGGAAGTCTGCAGCTTTGCATGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp TACAGACTTGGTTTTCCTGTCATGGGTATAAGGACCACTTCCATCCAGGGAGGAAGTTGTATTTTCTGTTaGGCATGGCAGACCAAGAAG +
Preference number: 4 (lower is better)
Translates to: YRLGFPVMGIRTTSIQGGSCIFC*AWQTKK
Trigger: CTTCTTGGTCTGCCATGCGCAACAGAAAATACAACT...TCCTCCCTGGATGGAAGTGGTCCTTATACCCATGACAGGAAAACCAAGTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp TCAGACACTCACTGGGAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTAGGAACTACAGGCATGTaGCACCACACCAGGCTAATT +
Preference number: 4 (lower is better)
Translates to: SDTHWESWDIIFKDKGGLGTTGM*HHTRLI
Trigger: AATTAGCCTGGTGTGGTGGCACATGCCTGTAGTTCC...TAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTCCCAGTGAGTGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATTCCTCTGCCTCCTCATaGTGCTCAATGAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHSSASS*CSMRAC
Trigger: ACAAGCCCTCATTGAGCACCATGAGGAGGCAGAGGA...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR CCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTGTATTGGATTTCAAGTaGATACAGATGCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIVLDFK*IQMHWL
Trigger: TAACCAGTGCATCTGTATCCACTTGAAATCCAATAC...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAAGGTGTGAGGACTTCCTaGTTCACCAAACTATCAGGA +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQGVRTS*FTKLSG
Trigger: TCCTGATAGTTTGGTGAACCAGGAAGTCCTCACACC...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TCTGATAGTCCTCTTAATCCAAAAGGTCAACATCAAGTTAAACAACATCCAGTTACAGGGCTCCCCGTCTaGGGTATGCACGGGACAAAG +
Preference number: 4 (lower is better)
Translates to: SDSPLNPKGQHQVKQHPVTGLPV*GMHGTK
Trigger: CTTTGTCCCGTGCATACCCCAGACGGGGAGCCCTGT...AACTGGATGTTGTTTAACTTGATGTTGACCTTTTGGATTAAGAGGACTATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp TTAAGGACCTGTTTTTGTGTCGAACAACCCTCTTCCATTACAATCCTTAACATCCATACGGCAGTTAGGTaGTTCATCAGGCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: LRTCFCVEQPSSITILNIHTAVR*FIRPQG
Trigger: GCCCTGTGGCCTGATGAACCACCTAACTGCCGTATG...GATGTTAAGGATTGTAATGGAAGAGGGTTGTTCGACACAAAAACAGGTCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAAAAAGGAACAATCCTaGGTACAGACTTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPKKEQS*VQTWFS
Trigger: GGAAAACCAAGTCTGTACCCAGGATTGTTCCTTTTT...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAATTACCCATCTGGCATTaGTACATGTTCCGTGGACTC +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQLPIWH*YMFRGL
Trigger: GAGTCCACGGAACATGTACCAATGCCAGATGGGTAA...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTTGCTCCTATAAACGGCAATCCATCGTCATCTAACTTCTGCAGAACGCGTGGGCATAATAATCATACATaGAGGGTCTCACCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: FAPINGNPSSSNFCRTRGHNNHT*RVSPRD
Trigger: GTCCCTTGGTGAGACCCTCCATGTATGATTATTATG...CCCACGCGTTCTGCAGAAGTTAGATGACGATGGATTGCCGTTTATAGGAGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTCCTTATTCACAATCATaGCATCTTCCATATCATAGC +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIPYSQS*HLPYHS
Trigger: GCTATGATATGGAAGATGCCATGATTGTGAATAAGG...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATACTTCTGCAGAACGCGTaGGTCACCAGGTTTGATGCC +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFILLQNA*VTRFDA
Trigger: GGCATCAAACCTGGTGACCCACGCGTTCTGCAGAAG...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGACCATGCAAAGCTGCAGACTTCCCGGCCATACTCTCAATTAACATCCCAATGCAATTAACATCCCAATaGTCATGCGGGATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: RPCKAADFPAILSINIPMQLTSQ*SCGMEN
Trigger: GTTTTCCATCCCGCATGACCATTGGGATGTTAATTG...CATTGGGATGTTAATTGAGAGTATGGCCGGGAAGTCTGCAGCTTTGCATGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp TTTGCTCCTATAAACGGCAATCCATCGTCATCTAACTTCTGCAGAACGCGTGGGCAATTAACATCCCAATaGTCATGCGGGATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: FAPINGNPSSSNFCRTRGQLTSQ*SCGMEN
Trigger: GTTTTCCATCCCGCATGACCATTGGGATGTTAATTG...CCCACGCGTTCTGCAGAAGTTAGATGACGATGGATTGCCGTTTATAGGAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp TTAAGGACCTGTTTTTGTGTCGAACAACCCTCTTCCATTACAATCCTTAACATCCTTCCCCCAATAGGCTaGTTGGTGACTCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: LRTCFCVEQPSSITILNILPPIG*LVTLSR
Trigger: CCGAGACAGAGTCACCAACCAGCCTATTGGGGGAAG...GATGTTAAGGATTGTAATGGAAGAGGGTTGTTCGACACAAAAACAGGTCCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCACTTCCCCCAATAGGCTaGTTGGTGACTCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSLPPIG*LVTLSR
Trigger: CCGAGACAGAGTCACCAACCAGCCTATTGGGGGAAG...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACACTTCCCCCAATAGGCTaGTTGGTGACTCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTLPPIG*LVTLSR
Trigger: CCGAGACAGAGTCACCAACCAGCCTATTGGGGGAAG...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATCACTTCACACACACATaGGCTACCGACCGATCTGAG +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHHFTHT*ATDRSE
Trigger: CTCAGATCGGTCGGTAGCCCATGTGTGTGTGAAGTG...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACCACTTCACACACACATaGGCTACCGACCGATCTGAG +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNHFTHT*ATDRSE
Trigger: CTCAGATCGGTCGGTAGCCCATGTGTGTGTGAAGTG...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATAGTGATGCAAACACACTTGAATTTTCCACTCCCAGTGTCATTACTGCACACTAGACCAAGAAGGGGGTaGCTTCTCCAACAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: IVMQTHLNFPLPVSLLHTRPRRG*LLQQWR
Trigger: TCTCCACTGTTGGAGAAGCCACCCCCTTCTTGGTCT...AGTGTGCAGTAATGACACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTTAATGCCCCCAAACTaGAAACAACCAAAATGTTCA +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSILMPPN*KQPKCS
Trigger: TGAACATTTTGGTTGTTTCCAGTTTGGGGGCATTAA...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCACAGGTTGCTGTGCAGTaGCGTGATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSQVAVQ*RDLGSL
Trigger: CAGTGAGCCAAGATCACGCCACTGCACAGCAACCTG...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR CAA 72 bp TGGCAGAGCTCTGTGATGACGGAACAGCTCTGTATCTaGCTTATGTTGCTGTTTTCATCCATCTACACAGGT +
Preference number: 4 (lower is better)
Translates to: WQSSVMTEQLCI*LMLLFSSIYTG
Trigger: ACCTGTGTAGATGGATGAAAACAGCAACATAAGCAAGATACAGAGCTGTTCCGTCATCACAGAGCTCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR CAA 72 bp GATACAGATGCACTGGTTAAACAGGAACTCCGCAGCTaGCTCATTTGGGTACCAGTCAGGAACATTGAGTTT +
Preference number: 4 (lower is better)
Translates to: DTDALVKQELRS*LIWVPVRNIEF
Trigger: AAACTCAATGTTCCTGACTGGTACCCAAATGAGCAAGCTGCGGAGTTCCTGTTTAACCAGTGCATCTGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
3UTR CAA 72 bp ACCAAACTATCAGGATTGTCCTCCATGCACTCTCCTTaGGCTAAAGCAAAGAGCTTTCGCGTCATGAGACAA +
Preference number: 4 (lower is better)
Translates to: TKLSGLSSMHSP*AKAKSFRVMRQ
Trigger: TTGTCTCATGACGCGAAAGCTCTTTGCTTTAGCCAAAGGAGAGTGCATGGAGGACAATCCTGATAGTTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR TCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGAGATACGCTCATCTTTaGAAGCAAATTCAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARRYAHL*KQIQRE
Trigger: CTCCCTTTGAATTTGCTTTCAAAGATGAGCGTATCT...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR TCA 90 bp AAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGCCATTGATAGAGCTGACCCGGTGTaGGGACTTCCTGGTTCACCA +
Preference number: 4 (lower is better)
Translates to: KISPRHNQHSDDFFNAIDRADPV*GLPGSP
Trigger: TGGTGAACCAGGAAGTCCTCACACCGGGTCAGCTCT...ATCAATGGCATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR TCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGAGAGCTGACCCGGTGTaGGGACTTCCTGGTTCACCA +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWRADPV*GLPGSP
Trigger: TGGTGAACCAGGAAGTCCTCACACCGGGTCAGCTCT...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCAAACATAAGGAAGAGCTaGCCCGGTGTGAGGACTTCC +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSNIRKS*PGVRTS
Trigger: GGAAGTCCTCACACCGGGTCAGCTCTTCCTTATGTT...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAGGGAGAGGTAGCGTATaGAGTTCAGCTTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIGRGSV*SSACQP
Trigger: TGGCTGACAAGCTGAACTTCATACGCTACCTCTCCC...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ACTCCCAGTGTCATTACTGCACACTTTGATGTTATCCACAACACAATTTTCTTTGTGGGTCACCAGGTTTaGTGCCAAACACCAGGCTAC +
Preference number: 4 (lower is better)
Translates to: TPSVITAHFDVIHNTIFFVGHQV*CQTPGY
Trigger: GTAGCCTGGTGTTTGGCATCAAACCTGGTGACCCAC...AAAGAAAATTGTGTTGTGGATAACATCAAAGTGTGCAGTAATGACACTGGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR TCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGCCAGTTGTCCTTACTTaGAATTTGTCTGAGACCATA +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARPVVLT*NLSETI
Trigger: TATGGTCTCAGACAAATTTCAAGTAAGGACAACTGG...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ATACGCTCATCTTTGAAAGCAAATTCAAAGGGAGGTATAGCCTGTAATCCCAATGGATTAACAGGTGTGTaGCACTCACTGCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: IRSSLKANSKGGIACNPNGLTGV*HSLPAE
Trigger: CTCAGCAGGCAGTGAGTGTCACACACCTGTTAATCC...ATTGGGATTACAGGCTATACCTCCCTTTGAATTTGCTTTCAAAGATGAGCGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR TCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGGATTAACAGGTGTGTaGCACTCACTGCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTGLTGV*HSLPAE
Trigger: CTCAGCAGGCAGTGAGTGTCACACACCTGTTAATCC...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGTTTCACTATGCTAAGTaGAATAAGCCAGTCACAGGA +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARFHYAK*NKPVTG
Trigger: TCCTGTGACTGGCTTATTTCACTTAGCATAGTGAAA...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCATCTCTCAACACTGTATaGTCGGTGGGGAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSSLNTV*SVGSSI
Trigger: GATGGAGCTCCCCACCGATCATACAGTGTTGAGAGA...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409894.7
CDS-3UTR GCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGAGAAAAGCTGACAAGTaGCTTAAGTGCAAATCCCAA +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARRKADK*LKCKSQ
Trigger: TTGGGATTTGCACTTAAGGCACTTGTCAGCTTTTCT...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAGGAACTCCGCAGCTTaGTCATTTGGGTACCAGTCA +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHRNSAA*SFGYQS
Trigger: TGACTGGTACCCAAATGAGCAAGCTGCGGAGTTCCT...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTAGGAACTCCGCAGCTTaGTCATTTGGGTACCAGTCA +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTRNSAA*SFGYQS
Trigger: TGACTGGTACCCAAATGAGCAAGCTGCGGAGTTCCT...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp CCAGCAATCCCAGTCTTGAACACTTGTCCCAGGGAAATGAAACTTATGTTTACACAGGATTGTCCTCCATaGACTCTCCTTTGGCTAAAG +
Preference number: 4 (lower is better)
Translates to: PAIPVLNTCPREMKLMFTQDCPP*TLLWLK
Trigger: CTTTAGCCAAAGGAGAGTGCATGGAGGACAATCCTG...TGTAAACATAAGTTTCATTTCCCTGGGACAAGTGTTCAAGACTGGGATTGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR GCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCACTCTGGCAGCAGCCTaGGTACTGTGGTGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFTLAAA*VLWWSS
Trigger: TGAGGACCACCACAGTACGCAGGCTGCTGCCAGAGT...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GTGTCGAACAACCCTCTTCCATTACAATCCTTAACATCTGAGAAACAGAGTTCCATGACGAAGAGAATCTaGGATGCCTGGAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: VSNNPLPLQSLTSEKQSSMTKRI*DAWSKI
Trigger: GATCTTGCTCCAGGCATCGCAGATTCTCTTCGTCAT...GGAACTCTGTTTCTCAGATGTTAAGGATTGTAATGGAAGAGGGTTGTTCGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR GCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACTCGTCATCTAACTTCTaGAGAACGCGTGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNSSSNF*RTRGSP
Trigger: TGGTGACCCACGCGTTCTGCAGAAGTTAGATGACGA...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATACAGCCGGCCACAATCTaGTTAAAATGCCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIQPATI*LKCPSA
Trigger: GGCAGAAGGGCATTTTAAGCAGATTGTGGCCGGCTG...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACACAGCCGGCCACAATCTaGTTAAAATGCCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTQPATI*LKCPSA
Trigger: GGCAGAAGGGCATTTTAAGCAGATTGTGGCCGGCTG...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGAGACCATGCAAAGCTaGAGACTTCCCGGCCATACT +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTETMQS*RLPGHT
Trigger: AGTATGGCCGGGAAGTCTGCAGCTTTGCATGGTCTC...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTTTGATGTTCATAGCTaGCAGTTCAGCTACAAAATA +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIFDVHS*QFSYKI
Trigger: TATTTTGTAGCTGAACTGGCAGCTATGAACATCAAA...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTAGACTTGTCACCGTATaGTCTTCCATTTATCAATAT +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIRLVTV*SSIYQY
Trigger: ATATTGATAAATGGAAGAGCATACGGTGACAAGTCT...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAAGCAGGGACTATAGATaGACAGCACCATGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTSRDYR*TAPCLA
Trigger: AGCCAGGCATGGTGCTGTGCATCTATAGTCCCTGCT...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp TCAGACACTCACTGGGAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTACTGTCCTTGAACTCCTaGACTCAAATGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SDTHWESWDIIFKDKGGLLSLNS*TQMILP
Trigger: TGGGAGGATCATTTGAGTGCAGGAGTTCAAGGACAG...TAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTCCCAGTGAGTGTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR GCA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTGTCAGTTTCTTGCAGTaGTTAATTAAACATCAAAGG +
Preference number: 4 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIVSFLQ*LIKHQR
Trigger: CCTTTGATGTTTAATTAAGCACTGCAAGAAACTGAC...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR GCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATGCTGGTTGGTCAGAATaGCAAGAAATGAATCACTTA +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYAGWSE*QEMNHL
Trigger: TAAGTGATTCATTTCTTGGCATTCTGACCAACCAGC...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR GCA 90 bp AGAAACAGAGTTCCTAAGGAAAGAATCATCCTCTTTTCCTTTGATGAGCTCCTGTCTTCCCTCACACAGTaGATTGAAACTCCTGCACCG +
Preference number: 4 (lower is better)
Translates to: RNRVPKERIILFSFDELLSSLTQ*IETPAP
Trigger: CGGTGCAGGAGTTTCAATGCACTGTGTGAGGGAAGA...CAGGAGCTCATCAAAGGAAAAGAGGATGATTCTTTCCTTAGGAACTCTGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430293.1
CDS-3UTR CCA 90 bp GCAATGGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGTCCTCTGCCTCCTCATaGTGCTCAATGAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: AMGKFLRGIINIRMTFSMSSASS*CSMRAC
Trigger: ACAAGCCCTCATTGAGCACCATGAGGAGGCAGAGGA...CATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCCATTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR CCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACATCCTCTGCCTCCTCATaGTGCTCAATGAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTSSASS*CSMRAC
Trigger: ACAAGCCCTCATTGAGCACCATGAGGAGGCAGAGGA...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR CCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGGTCTTATCATTGCAATaGGAAAATTTCTCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARVLSLQ*ENFSEA
Trigger: TGCCTCGGAGAAATTTTCCCATTGCAATGATAAGAC...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR CCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCGTATTGGATTTCAAGTaGATACAGATGCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPVLDFK*IQMHWL
Trigger: TAACCAGTGCATCTGTATCCACTTGAAATCCAATAC...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GACTACACAGAGTACAGTTGTATTTTCTGTTGCGCATGGCAGACCAAGAAGGGGTGTTCATGGAAACACTaGTCTTCTGAGCCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: DYTEYSCIFCCAWQTKKGCSWKH*SSEPSY
Trigger: ATAAGAAGGCTCAGAAGACCAGTGTTTCCATGAACA...CCCCTTCTTGGTCTGCCATGCGCAACAGAAAATACAACTGTACTCTGTGTAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp TTTGCTCCTATAAACGGCAATCCATCGTCATCTAACTTCTGCAGAACGCGTGGGAATTGTCAGTGTTCATaGAAACACTGGTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: FAPINGNPSSSNFCRTRGNCQCS*KHWSSE
Trigger: CTCAGAAGACCAGTGTTTCCATGAACACTGACAATT...CCCACGCGTTCTGCAGAAGTTAGATGACGATGGATTGCCGTTTATAGGAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACTGGTGGTCCTCATCTTaGCAAAATCAGCCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNWWSSS*QNQPLC
Trigger: ACAGAGGGGCTGATTTTGCCAAGATGAGGACCACCA...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGGCCTGCGTACTGTGGTaGTCCTCATCTTGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWACVLW*SSSWQN
Trigger: ATTTTGCCAAGATGAGGACCACCACAGTACGCAGGC...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTTCACTGTATGATCGGTaGGGAGCTCCATCAATGGGA +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTSLYDR*GAPSMG
Trigger: TCCCATTGATGGAGCTCCCCACCGATCATACAGTGA...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTCACTGTATGATCGGTaGGGAGCTCCATCAATGGGA +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWSLYDR*GAPSMG
Trigger: TCCCATTGATGGAGCTCCCCACCGATCATACAGTGA...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTACTCAGCAGGCTGTGTaGAAAGAGTTCCTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTTQQAV*KEFLVC
Trigger: ACACACCAGGAACTCTTTCCACACAGCCTGCTGAGT...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGACTCAGCAGGCTGTGTaGAAAGAGTTCCTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWTQQAV*KEFLVC
Trigger: ACACACCAGGAACTCTTTCCACACAGCCTGCTGAGT...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAATTGGTACATGTTCCGTaGACTCTGGTTGTGATCAGA +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQLVHVP*TLVVIR
Trigger: TCTGATCACAACCAGAGTCCACGGAACATGTACCAA...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAAGTTTGCTTACCCATCTaGCATTGGTACATGTTCCGT +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQVCLPI*HWYMFR
Trigger: ACGGAACATGTACCAATGCCAGATGGGTAAGCAAAC...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ACTCCCAGTGTCATTACTGCACACTTTGATGTTATCCACAACACAATTTTCTTTCTTCTGCAGAACGCGTaGGTCACCAGGTTTGATGCC +
Preference number: 4 (lower is better)
Translates to: TPSVITAHFDVIHNTIFFLLQNA*VTRFDA
Trigger: GGCATCAAACCTGGTGACCCACGCGTTCTGCAGAAG...AAAGAAAATTGTGTTGTGGATAACATCAAAGTGTGCAGTAATGACACTGGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp TGTCATAATAATCATACATGGAGGGTCTCACCAAGGGACTCTGAGGAGTCTGAAAAACGGATTCCACCCTaGACATTTCTTCCCCCAATA +
Preference number: 4 (lower is better)
Translates to: CHNNHTWRVSPRDSEESEKRIPP*TFLPPI
Trigger: TATTGGGGGAAGAAATGTCCAGGGTGGAATCCGTTT...TTCAGACTCCTCAGAGTCCCTTGGTGAGACCCTCCATGTATGATTATTATGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATACACTTCACACACACATaGGCTACCGACCGATCTGAG +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIHFTHT*ATDRSE
Trigger: CTCAGATCGGTCGGTAGCCCATGTGTGTGTGAAGTG...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTACACTTCACACACACATaGGCTACCGACCGATCTGAG +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVHFTHT*ATDRSE
Trigger: CTCAGATCGGTCGGTAGCCCATGTGTGTGTGAAGTG...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAAGACCAAGAAGGGGGTaGCTTCTCCAACAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTRPRRG*LLQQWR
Trigger: TCTCCACTGTTGGAGAAGCCACCCCCTTCTTGGTCT...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATATTTTCTGTTGCGCATaGCAGACCAAGAAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHIFCCA*QTKKGV
Trigger: CACCCCCTTCTTGGTCTGCCATGCGCAACAGAAAAT...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTATTTTCTGTTGCGCATaGCAGACCAAGAAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTIFCCA*QTKKGV
Trigger: CACCCCCTTCTTGGTCTGCCATGCGCAACAGAAAAT...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAACTGTCCTGCTCAAGATaGATTAACAGGTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQLSCSR*INRCVT
Trigger: TGTCACACACCTGTTAATCCATCTTGAGCAGGACAG...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCGCCTGGCTTCCAAAATaGATGAATCTTATTTCACTA +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPAWLPK*MNLISL
Trigger: TAGTGAAATAAGATTCATCCATTTTGGAAGCCAGGC...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTTTTCCGCAGCCTCTTTaGCTCTCATTGGCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTFPQPL*LSLAQS
Trigger: TGACTGAGCCAATGAGAGCCAAAGAGGCTGCGGAAA...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541869.5
3UTR CAA 72 bp ATGAAGATCTGTTCCATAGTTCCAATTAGCTCTTCTTaGCCCAATGCTAAGTTCTGCACAGGCCGTACCAGT +
Preference number: 4 (lower is better)
Translates to: MKICSIVPISSS*PNAKFCTGRTS
Trigger: ACTGGTACGGCCTGTGCAGAACTTAGCATTGGGCAAAGAAGAGCTAATTGGAACTATGGAACAGATCTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR TCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGCATTCACTGCCCAGTTaGTATCAGCTGTCAACTTCC +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWHSLPS*YQLSTS
Trigger: GGAAGTTGACAGCTGATATCAACTGGGCAGTGAATG...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR TCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTCATTCACTGCCCAGTTaGTATCAGCTGTCAACTTCC +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTHSLPS*YQLSTS
Trigger: GGAAGTTGACAGCTGATATCAACTGGGCAGTGAATG...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR TCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAGTGGAGGTTCATATTaGCAGCGGAATGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHSGGSY*QRNVLP
Trigger: GGGAAGAACATTCCGCTGTCAATATGAACCTCCACT...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AGAAACAGAGTTCCTAAGGAAAGAATCATCCTCTTTTCCTTTGATGAGCTCCTGAGTGGAGGTTCATATTaGCAGCGGAATGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RNRVPKERIILFSFDELLSGGSY*QRNVLP
Trigger: GGGAAGAACATTCCGCTGTCAATATGAACCTCCACT...CAGGAGCTCATCAAAGGAAAAGAGGATGATTCTTTCCTTAGGAACTCTGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000430293.1
CDS-3UTR TCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGTGGAGGTTCATATTaGCAGCGGAATGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNSGGSY*QRNVLP
Trigger: GGGAAGAACATTCCGCTGTCAATATGAACCTCCACT...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAGTAGCACTCACTGTATaGTCGGTGGGGAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSVALTV*SVGSSI
Trigger: GATGGAGCTCCCCACCGATCATACAGTGAGTGCTAC...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AATGTTCTTCCCTCACACAGTGCATTGAAACTCCATACTGAGTATAACCAGGCCCTCAACACCTTAAAATaGCGAAGAGAATCTGCGATG +
Preference number: 4 (lower is better)
Translates to: NVLPSHSALKLHTEYNQALNTLK*RRESAM
Trigger: CATCGCAGATTCTCTTCGTCATTTTAAGGTGTTGAG...GGCCTGGTTATACTCAGTATGGAGTTTCAATGCACTGTGTGAGGGAAGAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR TCA 90 bp GACTACACAGAGTACAGTTGTATTTTCTGTTGCGCATGGCAGACCAAGAAGGGGCATTACTGCACACTTTaGTGTTATCCACAACACAAT +
Preference number: 4 (lower is better)
Translates to: DYTEYSCIFCCAWQTKKGHYCTL*CYPQHN
Trigger: ATTGTGTTGTGGATAACATCAAAGTGTGCAGTAATG...CCCCTTCTTGGTCTGCCATGCGCAACAGAAAATACAACTGTACTCTGTGTAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR TCA 90 bp TGTAAGAAATCACAGCAACGATGGCATTGGTCCCAATTGGATAGTTATCCATGTGAAAACCATGGGGATTaGACAGAATGTCTGGGACCA +
Preference number: 4 (lower is better)
Translates to: CKKSQQRWHWSQLDSYPCENHGD*TECLGP
Trigger: TGGTCCCAGACATTCTGTTCAATCCCCATGGTTTTC...ACATGGATAACTATCCAATTGGGACCAATGCCATCGTTGCTGTGATTTCTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR TCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATGAAAACCATGGGGATTaGACAGAATGTCTGGGACCA +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHENHGD*TECLGP
Trigger: TGGTCCCAGACATTCTGTTCAATCCCCATGGTTTTC...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTCCAGTTCTAGCCCACTaGTGCCACTATATAACCTCT +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTPVLAH*CHYITS
Trigger: AGAGGTTATATAGTGGCATCAGTGGGCTAGAACTGG...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGCCAGTTCTAGCCCACTaGTGCCACTATATAACCTCT +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWPVLAH*CHYITS
Trigger: AGAGGTTATATAGTGGCATCAGTGGGCTAGAACTGG...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGGGCTTCCAAAATGGATaGATCTTATTTCACTATGCT +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARGFQNG*ILFHYA
Trigger: AGCATAGTGAAATAAGATTCATCCATTTTGGAAGCC...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCTGCAACGCTGCCTTTTaGTGTTCCCGCGGGATTCCA +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFCNAAF*CSRGIP
Trigger: TGGAATCCCGCGGGAACAGCAAAAGGCAGCGTTGCA...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCATGCAACGCTGCCTTTTaGTGTTCCCGCGGGATTCCA +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSCNAAF*CSRGIP
Trigger: TGGAATCCCGCGGGAACAGCAAAAGGCAGCGTTGCA...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGTCGGCCCCGGCATTCTaGTGGATAAACATTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWSAPAF*WINIGL
Trigger: GAGGCCAATGTTTATCCAGCAGAATGCCGGGGCCGA...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR GCA 90 bp GGAAAACCATGGGGATTGAACAGAATGTCTGGGACCATCCCACTCTCAGTAAAAGAAGGTTACGTAAGTTaGAAAGCTTGGATTTCACCA +
Preference number: 4 (lower is better)
Translates to: GKPWGLNRMSGTIPLSVKEGYVS*KAWISP
Trigger: TGGTGAAATCCAAGCTTTGCAACTTACGTAACCTTC...TTTTACTGAGAGTGGGATGGTCCCAGACATTCTGTTCAATCCCCATGGTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR GCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCTCTGCCTCCTCATGGTaGTCAATGAGGGCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFSASSW*SMRACG
Trigger: CCCACAAGCCCTCATTGAGCACCATGAGGAGGCAGA...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR GCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGCAGGATTGTCCTCCATaGACTCTCCTTTGGCTAAAG +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWQDCPP*TLLWLK
Trigger: CTTTAGCCAAAGGAGAGTGCATGGAGGACAATCCTG...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGATGACGAAGAGAATCTaGGATGCCTGGAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWMTKRI*DAWSKI
Trigger: GATCTTGCTCCAGGCATCGCAGATTCTCTTCGTCAT...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATATGACGAAGAGAATCTaGGATGCCTGGAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHMTKRI*DAWSKI
Trigger: GATCTTGCTCCAGGCATCGCAGATTCTCTTCGTCAT...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTGGAAAGCCCATAGTTTaGTTACCCATCTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTGKPIV*LPIWHW
Trigger: CCAATGCCAGATGGGTAAGCAAACTATGGGCTTTCC...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AATGGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGCCTCGTCATCTAACTTCTaGAGAACGCGTGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: NGKISPRHNQHSDDFFNASSSNF*RTRGSP
Trigger: TGGTGACCCACGCGTTCTGCAGAAGTTAGATGACGA...GGCATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR GCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATATCGTCATCTAACTTCTaGAGAACGCGTGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFISSSNF*RTRGSP
Trigger: TGGTGACCCACGCGTTCTGCAGAAGTTAGATGACGA...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATCTTAAAATGCCCTTCTaGCCATGGCGACTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHLKMPF*PWRLAN
Trigger: ATTTGCCAGTCGCCATGGGCAGAAGGGCATTTTAAG...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTCTTAAAATGCCCTTCTaGCCATGGCGACTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTLKMPF*PWRLAN
Trigger: ATTTGCCAGTCGCCATGGGCAGAAGGGCATTTTAAG...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCAACATCCCAATGGTCATaGGGGATGGAAAACCATGGG +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSTSQWS*GMENHG
Trigger: CCCATGGTTTTCCATCCCGCATGACCATTGGGATGT...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAACATCCCAATGGTCATaGGGGATGGAAAACCATGGG +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTTSQWS*GMENHG
Trigger: CCCATGGTTTTCCATCCCGCATGACCATTGGGATGT...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGAAAACCATGGGGATTGAACAGAATGTCTGGGACCATCCCACTCTCAGTAAAATATATAACCTCTCGGTaGCATAGAAATTGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: GKPWGLNRMSGTIPLSVKYITSR*HRNCSQ
Trigger: CTGGCTACAATTTCTATGGCACCGAGAGGTTATATA...TTTTACTGAGAGTGGGATGGTCCCAGACATTCTGTTCAATCCCCATGGTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp TCAGACACTCACTGGGAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTAGTGGAGAGAGTAAACTaGCACACTTCACACACACAT +
Preference number: 4 (lower is better)
Translates to: SDTHWESWDIIFKDKGGLVERVN*HTSHTH
Trigger: ATGTGTGTGTGAAGTGTGGCAGTTTACTCTCTCCAC...TAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTCCCAGTGAGTGTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR GCA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCTGTTGTACAACATGGTaGCTGGAATTAACAATACTA +
Preference number: 4 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPCCTTW*LELTIL
Trigger: TAGTATTGTTAATTCCAGGCACCATGTTGTACAACA...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTAGATGCACAGCACCATaGCTGGCTTCCAAAATGGAT +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTRCTAP*LASKMD
Trigger: ATCCATTTTGGAAGCCAGGCATGGTGCTGTGCATCT...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGAGATGCACAGCACCATaGCTGGCTTCCAAAATGGAT +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWRCTAP*LASKMD
Trigger: ATCCATTTTGGAAGCCAGGCATGGTGCTGTGCATCT...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACCTGTCCTTGAACTCCTaGACTCAAATGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNLSLNS*TQMILP
Trigger: TGGGAGGATCATTTGAGTGCAGGAGTTCAAGGACAG...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACTCCGGCCAAAGTCGTTaGTTCAACGAAAAAGCGGAT +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNSGQSR*FNEKAD
Trigger: ATCCGCTTTTTCGTTGAAGCAACGACTTTGGCCGGA...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537335.5
CDS-3UTR CCA 90 bp AATGGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGCCGCCCCGGCATTCTGCTaGATAAACATTGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: NGKISPRHNQHSDDFFNAAPAFC*INIGLF
Trigger: AAAGAGGCCAATGTTTATCCAGCAGAATGCCGGGGC...GGCATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR CCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGCCCCGGCATTCTGCTaGATAAACATTGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTAPAFC*INIGLF
Trigger: AAAGAGGCCAATGTTTATCCAGCAGAATGCCGGGGC...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR CCA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATGTATTGGATTTCAAGTaGATACAGATGCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYVLDFK*IQMHWL
Trigger: TAACCAGTGCATCTGTATCCACTTGAAATCCAATAC...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTGGTGTGAGGACTTCCTaGTTCACCAAACTATCAGGA +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTGVRTS*FTKLSG
Trigger: TCCTGATAGTTTGGTGAACCAGGAAGTCCTCACACC...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGCCATTTGGTGGTCCTCATCTTaGCAAAATCAGCCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GKISPRHNQHSDDFFNAIWWSSS*QNQPLC
Trigger: ACAGAGGGGCTGATTTTGCCAAGATGAGGACCACCA...AATGGCATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCATGGTGGTCCTCATCTTaGCAAAATCAGCCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSWWSSS*QNQPLC
Trigger: ACAGAGGGGCTGATTTTGCCAAGATGAGGACCACCA...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCGCAGCCTGCGTACTGTaGTGGTCCTCATCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFAACVL*WSSSWQ
Trigger: TTGCCAAGATGAGGACCACCACAGTACGCAGGCTGC...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCCATACGGCAGTTAGGTaGTTCATCAGGCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFHTAVR*FIRPQG
Trigger: GCCCTGTGGCCTGATGAACCACCTAACTGCCGTATG...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACATCACTGTATGATCGGTaGGGAGCTCCATCAATGGGA +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTSLYDR*GAPSMG
Trigger: TCCCATTGATGGAGCTCCCCACCGATCATACAGTGA...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTAGAATCTGCGATGCCTaGAGCAAGATCCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTRICDA*SKILIH
Trigger: GTGGATAAGGATCTTGCTCCAGGCATCGCAGATTCT...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGAATCTGCGATGCCTaGAGCAAGATCCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNRICDA*SKILIH
Trigger: GTGGATAAGGATCTTGCTCCAGGCATCGCAGATTCT...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ACGATACAGTTTGTTATCCGATCGGTCTTGATAAGTGAGAAGTGGAAAGCCCATTCCTGGGTACAGACTTaGTTTTCCTGTCATGGGTAT +
Preference number: 4 (lower is better)
Translates to: TIQFVIRSVLISEKWKAHSWVQT*FSCHGY
Trigger: ATACCCATGACAGGAAAACCAAGTCTGTACCCAGGA...ATGGGCTTTCCACTTCTCACTTATCAAGACCGATCGGATAACAAACTGTATCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp TGTGGGGGAAGGTTACGTAAGTTGCAAAGCTTGGATTTCACCATGATGGGAACAAAAAAGGAACAATCCTaGGTACAGACTTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: CGGRLRKLQSLDFTMMGTKKEQS*VQTWFS
Trigger: GGAAAACCAAGTCTGTACCCAGGATTGTTCCTTTTT...TGTTCCCATCATGGTGAAATCCAAGCTTTGCAACTTACGTAACCTTCCCCCACA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCAACTCAGCAGGCTGTGTaGAAAGAGTTCCTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSTQQAV*KEFLVC
Trigger: ACACACCAGGAACTCTTTCCACACAGCCTGCTGAGT...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAACTCAGCAGGCTGTGTaGAAAGAGTTCCTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTTQQAV*KEFLVC
Trigger: ACACACCAGGAACTCTTTCCACACAGCCTGCTGAGT...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GTAAAAAGGAACAATCCTGGGTACAGACTTGGTTTTCCTGTCATGGGTATAAGGGTTTGCTTACCCATCTaGCATTGGTACATGTTCCGT +
Preference number: 4 (lower is better)
Translates to: VKRNNPGYRLGFPVMGIRVCLPI*HWYMFR
Trigger: ACGGAACATGTACCAATGCCAGATGGGTAAGCAAAC...CCTTATACCCATGACAGGAAAACCAAGTCTGTACCCAGGATTGTTCCTTTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp GAGGTTGAGGTAGCTGTAATACGGATCTCCGTACTGCAGTTTTGCTCCTATAAACAGCAACGATGGCATTaGTCCCAATTGGATAGTTAT +
Preference number: 4 (lower is better)
Translates to: EVEVAVIRISVLQFCSYKQQRWH*SQLDSY
Trigger: ATAACTATCCAATTGGGACCAATGCCATCGTTGCTG...TTTATAGGAGCAAAACTGCAGTACGGAGATCCGTATTACAGCTACCTCAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGCCTTATTCACAATCATaGCATCTTCCATATCATAGC +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARPYSQS*HLPYHS
Trigger: GCTATGATATGGAAGATGCCATGATTGTGAATAAGG...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGCTTCTGCAGAACGCGTaGGTCACCAGGTTTGATGCC +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWLLQNA*VTRFDA
Trigger: GGCATCAAACCTGGTGACCCACGCGTTCTGCAGAAG...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTATGCCCTTCTGCCCATaGCGACTGGCAAATTTATCT +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTMPFCP*RLANLS
Trigger: AGATAAATTTGCCAGTCGCCATGGGCAGAAGGGCAT...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATAGTGATGCAAACACACTTGAATTTTCCACTCCCAGTGTCATTACTGCACACTATGCCCTTCTGCCCATaGCGACTGGCAAATTTATCT +
Preference number: 4 (lower is better)
Translates to: IVMQTHLNFPLPVSLLHTMPFCP*RLANLS
Trigger: AGATAAATTTGCCAGTCGCCATGGGCAGAAGGGCAT...AGTGTGCAGTAATGACACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGATGCCCTTCTGCCCATaGCGACTGGCAAATTTATCT +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWMPFCP*RLANLS
Trigger: AGATAAATTTGCCAGTCGCCATGGGCAGAAGGGCAT...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GTAAAAAGGAACAATCCTGGGTACAGACTTGGTTTTCCTGTCATGGGTATAAGGAATGGTCATGCGGGATaGAAAACCATGGGGATTGAA +
Preference number: 4 (lower is better)
Translates to: VKRNNPGYRLGFPVMGIRNGHAG*KTMGIE
Trigger: TTCAATCCCCATGGTTTTCCATCCCGCATGACCATT...CCTTATACCCATGACAGGAAAACCAAGTCTGTACCCAGGATTGTTCCTTTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAAGGGTGTAGCATCATaGCAGAGACCATGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHKGVAS*QRPCKA
Trigger: AGCTTTGCATGGTCTCTGCCATGATGCTACACCCTT...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAAGGGTGTAGCATCATaGCAGAGACCATGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNKGVAS*QRPCKA
Trigger: AGCTTTGCATGGTCTCTGCCATGATGCTACACCCTT...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTACTTGAAATTTGTCTGAGACCATATGGCGTAAGCGCTGATAATAAACCACTCATTTTCTGTTGCGCATaGCAGACCAAGAAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LLEICLRPYGVSADNKPLIFCCA*QTKKGV
Trigger: CACCCCCTTCTTGGTCTGCCATGCGCAACAGAAAAT...GAGTGGTTTATTATCAGCGCTTACGCCATATGGTCTCAGACAAATTTCAAGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCAATTTTCTGTTGCGCATaGCAGACCAAGAAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSIFCCA*QTKKGV
Trigger: CACCCCCTTCTTGGTCTGCCATGCGCAACAGAAAAT...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGGCCTGGCTTCCAAAATaGATGAATCTTATTTCACTA +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARAWLPK*MNLISL
Trigger: TAGTGAAATAAGATTCATCCATTTTGGAAGCCAGGC...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATGCACAGCACCATGCCTaGCTTCCAAAATGGATGAAT +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHAQHHA*LPKWMN
Trigger: ATTCATCCATTTTGGAAGCCAGGCATGGTGCTGTGC...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAAGGTAGGAATGTAAAATaGCACAGCCACTCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQGRNVK*HSHSEK
Trigger: CTTTTCAGAGTGGCTGTGCCATTTTACATTCCTACC...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CCA 90 bp AAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGCCATTGATTTTTGGAACTGTAGGTaGACTGCACCGCGAGGCCGA +
Preference number: 4 (lower is better)
Translates to: KISPRHNQHSDDFFNAIDFWNCR*TAPRGR
Trigger: TCGGCCTCGCGGTGCAGTCCACCTACAGTTCCAAAA...ATCAATGGCATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424062.1
CDS-3UTR TCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATACATTCACTGCCCAGTTaGTATCAGCTGTCAACTTCC +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIHSLPS*YQLSTS
Trigger: GGAAGTTGACAGCTGATATCAACTGGGCAGTGAATG...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR TCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAGGGAGAGGTAGCGTATaGAGTTCAGCTTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSGRGSV*SSACQP
Trigger: TGGCTGACAAGCTGAACTTCATACGCTACCTCTCCC...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATTATACACAAACTGTGTaGCAACCTCACATACGGCAG +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHYTQTV*QPHIRQ
Trigger: CTGCCGTATGTGAGGTTGTCACACAGTTTGTGTATA...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTTATACACAAACTGTGTaGCAACCTCACATACGGCAG +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTYTQTV*QPHIRQ
Trigger: CTGCCGTATGTGAGGTTGTCACACAGTTTGTGTATA...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGCCATTCCAGTTCTAGCCCACTaGTGCCACTATATAACCTCT +
Preference number: 4 (lower is better)
Translates to: GKISPRHNQHSDDFFNAIPVLAH*CHYITS
Trigger: AGAGGTTATATAGTGGCATCAGTGGGCTAGAACTGG...AATGGCATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR TCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTACCAGTTCTAGCCCACTaGTGCCACTATATAACCTCT +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVPVLAH*CHYITS
Trigger: AGAGGTTATATAGTGGCATCAGTGGGCTAGAACTGG...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAAAATAAACCACTCCTATaGAGATGTCTGCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQNKPLL*RCLLPV
Trigger: AACTGGAAGCAGACATCTTCATAGGAGTGGTTTATT...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTAGAAAAGATGTACCATaGGCTAAAAGCGCATCCCGT +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTRKDVP*AKSASR
Trigger: ACGGGATGCGCTTTTAGCTCATGGTACATCTTTTCT...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGAGAAAAGATGTACCATaGGCTAAAAGCGCATCCCGT +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWRKDVP*AKSASR
Trigger: ACGGGATGCGCTTTTAGCTCATGGTACATCTTTTCT...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAGAAAAGATGTACCATaGGCTAAAAGCGCATCCCGT +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHRKDVP*AKSASR
Trigger: ACGGGATGCGCTTTTAGCTCATGGTACATCTTTTCT...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTTTGAAGAGGCGGTCATaGAGGAGAAAAGATGTACCA +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTLKRRS*RRKDVP
Trigger: TGGTACATCTTTTCTCCTTCATGACCGCCTCTTCAA...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ATAGTGATGCAAACACACTTGAATTTTCCACTCCCAGTGTCATTACTGCACACTTTGAAGAGGCGGTCATaGAGGAGAAAAGATGTACCA +
Preference number: 4 (lower is better)
Translates to: IVMQTHLNFPLPVSLLHTLKRRS*RRKDVP
Trigger: TGGTACATCTTTTCTCCTTCATGACCGCCTCTTCAA...AGTGTGCAGTAATGACACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR TCA 90 bp CACTCTCATAGTGATGCAAACACACTTGAATTTTCCACTCCCAGTGTCATTACTTTGAAGAGGCGGTCATaGAGGAGAAAAGATGTACCA +
Preference number: 4 (lower is better)
Translates to: HSHSDANTLEFSTPSVITLKRRS*RRKDVP
Trigger: TGGTACATCTTTTCTCCTTCATGACCGCCTCTTCAA...AGTAATGACACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCACTATGAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR TCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGGGATTAACAGGTGTGTaGCACTCACTGCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWGLTGV*HSLPAE
Trigger: CTCAGCAGGCAGTGAGTGTCACACACCTGTTAATCC...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAGGATTAACAGGTGTGTaGCACTCACTGCCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSGLTGV*HSLPAE
Trigger: CTCAGCAGGCAGTGAGTGTCACACACCTGTTAATCC...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GACTACACAGAGTACAGTTGTATTTTCTGTTGCGCATGGCAGACCAAGAAGGGGTTTTGGTCTTATCATTaGAATGGGAAAATTTCTCCG +
Preference number: 4 (lower is better)
Translates to: DYTEYSCIFCCAWQTKKGFWSYH*NGKISP
Trigger: CGGAGAAATTTTCCCATTGCAATGATAAGACCAAAA...CCCCTTCTTGGTCTGCCATGCGCAACAGAAAATACAACTGTACTCTGTGTAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR GCA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGTTTTGGTCTTATCATTaGAATGGGAAAATTTCTCCG +
Preference number: 4 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARFWSYH*NGKISP
Trigger: CGGAGAAATTTTCCCATTGCAATGATAAGACCAAAA...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR GCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATACAGGATTGTCCTCCATaGACTCTCCTTTGGCTAAAG +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIQDCPP*TLLWLK
Trigger: CTTTAGCCAAAGGAGAGTGCATGGAGGACAATCCTG...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATGAAGAGAATCTGCGATaGCTGGAGCAAGATCCTTAT +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHEENLR*LEQDPY
Trigger: ATAAGGATCTTGCTCCAGGCATCGCAGATTCTCTTC...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTGAAGAGAATCTGCGATaGCTGGAGCAAGATCCTTAT +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTEENLR*LEQDPY
Trigger: ATAAGGATCTTGCTCCAGGCATCGCAGATTCTCTTC...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAATGACGAAGAGAATCTaGGATGCCTGGAGCAAGATC +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTMTKRI*DAWSKI
Trigger: GATCTTGCTCCAGGCATCGCAGATTCTCTTCGTCAT...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGGAAAGCCCATAGTTTaGTTACCCATCTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTGKPIV*LPIWHW
Trigger: CCAATGCCAGATGGGTAAGCAAACTATGGGCTTTCC...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATTCCGTACTGCAGTTTTaGTCCTATAAACGGCAATCC +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHSVLQF*SYKRQS
Trigger: GGATTGCCGTTTATAGGAGCAAAACTGCAGTACGGA...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp ATAGTGATGCAAACACACTTGAATTTTCCACTCCCAGTGTCATTACTGCACACTTCCGTACTGCAGTTTTaGTCCTATAAACGGCAATCC +
Preference number: 4 (lower is better)
Translates to: IVMQTHLNFPLPVSLLHTSVLQF*SYKRQS
Trigger: GGATTGCCGTTTATAGGAGCAAAACTGCAGTACGGA...AGTGTGCAGTAATGACACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATACTTAAAATGCCCTTCTaGCCATGGCGACTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFILKMPF*PWRLAN
Trigger: ATTTGCCAGTCGCCATGGGCAGAAGGGCATTTTAAG...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACACTTAAAATGCCCTTCTaGCCATGGCGACTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTLKMPF*PWRLAN
Trigger: ATTTGCCAGTCGCCATGGGCAGAAGGGCATTTTAAG...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCACAGCCGGCCACAATCTaGTTAAAATGCCCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSQPATI*LKCPSA
Trigger: GGCAGAAGGGCATTTTAAGCAGATTGTGGCCGGCTG...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAATATATAACCTCTCGGTaGCATAGAAATTGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQYITSR*HRNCSQ
Trigger: CTGGCTACAATTTCTATGGCACCGAGAGGTTATATA...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp TGTAAGAAATCACAGCAACGATGGCATTGGTCCCAATTGGATAGTTATCCATGTGTGGAGAGAGTAAACTaGCACACTTCACACACACAT +
Preference number: 4 (lower is better)
Translates to: CKKSQQRWHWSQLDSYPCVERVN*HTSHTH
Trigger: ATGTGTGTGTGAAGTGTGGCAGTTTACTCTCTCCAC...ACATGGATAACTATCCAATTGGGACCAATGCCATCGTTGCTGTGATTTCTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGCAGGGACTATAGATaGACAGCACCATGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFSRDYR*TAPCLA
Trigger: AGCCAGGCATGGTGCTGTGCATCTATAGTCCCTGCT...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGTGACATCACCAAATaGTGGTTGGTCAGAATGCCA +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNSDITK*WLVRMP
Trigger: TGGCATTCTGACCAACCAGCATTTGGTGATGTCACT...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTAGCAGATGGTCCCTTTTaGAACTGTAGGTGGACTGAT +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVADGPF*NCRWTD
Trigger: ATCAGTCCACCTACAGTTCCAAAAGGGACCATCTGC...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATACTGCTGGATAAACATTaGCCTCTTTGCAGATGGTCC +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFILLDKH*PLCRWS
Trigger: GGACCATCTGCAAAGAGGCCAATGTTTATCCAGCAG...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGCCATTCTGCTGGATAAACATTaGCCTCTTTGCAGATGGTCC +
Preference number: 4 (lower is better)
Translates to: GKISPRHNQHSDDFFNAILLDKH*PLCRWS
Trigger: GGACCATCTGCAAAGAGGCCAATGTTTATCCAGCAG...AATGGCATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR CCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAAGTCTTATCATTGCAATaGGAAAATTTCTCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQVLSLQ*ENFSEA
Trigger: TGCCTCGGAGAAATTTTCCCATTGCAATGATAAGAC...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR CCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACACGCAGCTTGCTCATTTaGGTACCAGTCAGGAACATT +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTRSLLI*VPVRNI
Trigger: AATGTTCCTGACTGGTACCCAAATGAGCAAGCTGCG...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATACGCAGCTTGCTCATTTaGGTACCAGTCAGGAACATT +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIRSLLI*VPVRNI
Trigger: AATGTTCCTGACTGGTACCCAAATGAGCAAGCTGCG...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAAAATTGTCAGTGTTCATaGAAACACTGGTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQNCQCS*KHWSSE
Trigger: CTCAGAAGACCAGTGTTTCCATGAACACTGACAATT...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GCAATGGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGAGAATCTGCGATGCCTaGAGCAAGATCCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: AMGKFLRGIINIRMTFSMRICDA*SKILIH
Trigger: GTGGATAAGGATCTTGCTCCAGGCATCGCAGATTCT...CATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCCATTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTTCCTGGGTACAGACTTaGTTTTCCTGTCATGGGTAT +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTSWVQT*FSCHGY
Trigger: ATACCCATGACAGGAAAACCAAGTCTGTACCCAGGA...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGGTACATGTTCCGTaGACTCTGGTTGTGATCAGA +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWLVHVP*TLVVIR
Trigger: TCTGATCACAACCAGAGTCCACGGAACATGTACCAA...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GTAGCTGTAATACGGATCTCCGTACTGCAGTTTTGCTCCTATAAACGGCAATCCTTGATAAGTGAGAAGTaGAAAGCCCATAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: VAVIRISVLQFCSYKRQSLISEK*KAHSLL
Trigger: AAGCAAACTATGGGCTTTCCACTTCTCACTTATCAA...GGATTGCCGTTTATAGGAGCAAAACTGCAGTACGGAGATCCGTATTACAGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATTTTATCTCCGATAGTTaGGTTCCGAGGCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHFISDS*VPRHSH
Trigger: ATGAGAGTGCCTCGGAACCCAACTATCGGAGATAAA...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTTATCTCCGATAGTTaGGTTCCGAGGCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWFISDS*VPRHSH
Trigger: ATGAGAGTGCCTCGGAACCCAACTATCGGAGATAAA...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTTTTATCTCCGATAGTTaGGTTCCGAGGCACTCTCAT +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTFISDS*VPRHSH
Trigger: ATGAGAGTGCCTCGGAACCCAACTATCGGAGATAAA...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTAATGCCCTTCTGCCCATaGCGACTGGCAAATTTATCT +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVMPFCP*RLANLS
Trigger: AGATAAATTTGCCAGTCGCCATGGGCAGAAGGGCAT...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCAATGCCCTTCTGCCCATaGCGACTGGCAAATTTATCT +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSMPFCP*RLANLS
Trigger: AGATAAATTTGCCAGTCGCCATGGGCAGAAGGGCAT...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGCGGGATGGAAAACCATaGGGATTGAACAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWRDGKP*GLNRMS
Trigger: AGACATTCTGTTCAATCCCCATGGTTTTCCATCCCG...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAATGGTCATGCGGGATaGAAAACCATGGGGATTGAA +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHNGHAG*KTMGIE
Trigger: TTCAATCCCCATGGTTTTCCATCCCGCATGACCATT...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCCACTTCACACACACATaGGCTACCGACCGATCTGAG +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFHFTHT*ATDRSE
Trigger: CTCAGATCGGTCGGTAGCCCATGTGTGTGTGAAGTG...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGAGACCAAGAAGGGGGTaGCTTCTCCAACAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWRPRRG*LLQQWR
Trigger: TCTCCACTGTTGGAGAAGCCACCCCCTTCTTGGTCT...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TCAGACACTCACTGGGAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTATTGGTTTTCAGGTCTTaGTTGAGAGTTCTAACACCG +
Preference number: 4 (lower is better)
Translates to: SDTHWESWDIIFKDKGGLLVFRS*LRVLTP
Trigger: CGGTGTTAGAACTCTCAACCAAGACCTGAAAACCAA...TAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTCCCAGTGAGTGTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGCTGTCCTGCTCAAGATaGATTAACAGGTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWLSCSR*INRCVT
Trigger: TGTCACACACCTGTTAATCCATCTTGAGCAGGACAG...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAGCACAGCACCATGCCTaGCTTCCAAAATGGATGAAT +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIAQHHA*LPKWMN
Trigger: ATTCATCCATTTTGGAAGCCAGGCATGGTGCTGTGC...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
3UTR CAA 72 bp AGTCTGAAGACGATACAGTTTGTTATCCGATCGGTCTaGATAAGTGAGAAGTGGAAAGCCCATAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: SLKTIQFVIRSV*ISEKWKAHSLL
Trigger: AAGCAAACTATGGGCTTTCCACTTCTCACTTATCAAGACCGATCGGATAACAAACTGTATCGTCTTCAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR TCA 90 bp ATTGCAATGGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCACATTCACTGCCCAGTTaGTATCAGCTGTCAACTTCC +
Preference number: 4 (lower is better)
Translates to: IAMGKFLRGIINIRMTFSHSLPS*YQLSTS
Trigger: GGAAGTTGACAGCTGATATCAACTGGGCAGTGAATG...TGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCCATTGCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR TCA 90 bp ATACGCTCATCTTTGAAAGCAAATTCAAAGGGAGGTATAGCCTGTAATCCCAATGCTTGGATTTCACCATaGTGGGAACATAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: IRSSLKANSKGGIACNPNAWISP*WEHSQE
Trigger: TTCTTGGCTATGTTCCCATCATGGTGAAATCCAAGC...ATTGGGATTACAGGCTATACCTCCCTTTGAATTTGCTTTCAAAGATGAGCGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR TCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCAGCTTGGATTTCACCATaGTGGGAACATAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSAWISP*WEHSQE
Trigger: TTCTTGGCTATGTTCCCATCATGGTGAAATCCAAGC...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR TCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAGCTTGGATTTCACCATaGTGGGAACATAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIAWISP*WEHSQE
Trigger: TTCTTGGCTATGTTCCCATCATGGTGAAATCCAAGC...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR TCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGCCTCACACAGTGCATTaGAACTCCATACTGAGTATA +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWPHTVH*NSILSI
Trigger: TATACTCAGTATGGAGTTTCAATGCACTGTGTGAGG...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR TCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACCCTCACACAGTGCATTaGAACTCCATACTGAGTATA +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNPHTVH*NSILSI
Trigger: TATACTCAGTATGGAGTTTCAATGCACTGTGTGAGG...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR TCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATGAAACACTGGTCTTCTaGGCCTTCTTATCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHETLVF*AFLSKA
Trigger: AGCTTTTGATAAGAAGGCTCAGAAGACCAGTGTTTC...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACGAAACACTGGTCTTCTaGGCCTTCTTATCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNETLVF*AFLSKA
Trigger: AGCTTTTGATAAGAAGGCTCAGAAGACCAGTGTTTC...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTGAAACACTGGTCTTCTaGGCCTTCTTATCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTETLVF*AFLSKA
Trigger: AGCTTTTGATAAGAAGGCTCAGAAGACCAGTGTTTC...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTATATACACAAACTGTGTaGCAACCTCACATACGGCAG +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVYTQTV*QPHIRQ
Trigger: CTGCCGTATGTGAGGTTGTCACACAGTTTGTGTATA...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATCTCAACACCTTAAAATaGCGAAGAGAATCTGCGATG +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHLNTLK*RRESAM
Trigger: CATCGCAGATTCTCTTCGTCATTTTAAGGTGTTGAG...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACTTTCAGAGAGGTCTATaGACTCAGACTTGTAGACAC +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNFQRGL*TQTCRH
Trigger: GTGTCTACAAGTCTGAGTTCATAGACCTCTCTGAAA...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAACATTACTGCACACTTTaGTGTTATCCACAACACAAT +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQHYCTL*CYPQHN
Trigger: ATTGTGTTGTGGATAACATCAAAGTGTGCAGTAATG...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GGACCTGTTTTTGTGTCGAACAACCCTCTTCCATTACAATCCTTAACATCTGAGAATAAACCACTCCTATaGAGATGTCTGCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: GPVFVSNNPLPLQSLTSENKPLL*RCLLPV
Trigger: AACTGGAAGCAGACATCTTCATAGGAGTGGTTTATT...CTCAGATGTTAAGGATTGTAATGGAAGAGGGTTGTTCGACACAAAAACAGGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR TCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCAAGAAAAGATGTACCATaGGCTAAAAGCGCATCCCGT +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSRKDVP*AKSASR
Trigger: ACGGGATGCGCTTTTAGCTCATGGTACATCTTTTCT...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATATTGAAGAGGCGGTCATaGAGGAGAAAAGATGTACCA +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFILKRRS*RRKDVP
Trigger: TGGTACATCTTTTCTCCTTCATGACCGCCTCTTCAA...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCAACCTGGAATAGTGTGTaGAAGTGTGTGGTTGGGATT +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSTWNSV*KCVVGI
Trigger: AATCCCAACCACACACTTTCACACACTATTCCAGGT...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR GCA 90 bp TCAGACACTCACTGGGAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTAAGAAAAGCTGACAAGTaGCTTAAGTGCAAATCCCAA +
Preference number: 4 (lower is better)
Translates to: SDTHWESWDIIFKDKGGLRKADK*LKCKSQ
Trigger: TTGGGATTTGCACTTAAGGCACTTGTCAGCTTTTCT...TAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTCCCAGTGAGTGTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR GCA 90 bp GGACCTGTTTTTGTGTCGAACAACCCTCTTCCATTACAATCCTTAACATCTGAGAGAAAAGCTGACAAGTaGCTTAAGTGCAAATCCCAA +
Preference number: 4 (lower is better)
Translates to: GPVFVSNNPLPLQSLTSERKADK*LKCKSQ
Trigger: TTGGGATTTGCACTTAAGGCACTTGTCAGCTTTTCT...CTCAGATGTTAAGGATTGTAATGGAAGAGGGTTGTTCGACACAAAAACAGGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000430293.1
CDS-3UTR GCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGAACTCCGCAGCTTaGTCATTTGGGTACCAGTCA +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFRNSAA*SFGYQS
Trigger: TGACTGGTACCCAAATGAGCAAGCTGCGGAGTTCCT...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGAAGAGAATCTGCGATaGCTGGAGCAAGATCCTTAT +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTEENLR*LEQDPY
Trigger: ATAAGGATCTTGCTCCAGGCATCGCAGATTCTCTTC...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCACCCAATGCTAAGTTCTaGACAGGCCGTACCAGTCTA +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSPNAKF*TGRTSL
Trigger: TAGACTGGTACGGCCTGTGCAGAACTTAGCATTGGG...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCTCGTCATCTAACTTCTaGAGAACGCGTGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFSSSNF*RTRGSP
Trigger: TGGTGACCCACGCGTTCTGCAGAAGTTAGATGACGA...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATATCCGTACTGCAGTTTTaGTCCTATAAACGGCAATCC +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFISVLQF*SYKRQS
Trigger: GGATTGCCGTTTATAGGAGCAAAACTGCAGTACGGA...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAACATCCCAATGGTCATaGGGGATGGAAAACCATGGG +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSTSQWS*GMENHG
Trigger: CCCATGGTTTTCCATCCCGCATGACCATTGGGATGT...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGTGGAGAGAGTAAACTaGCACACTTCACACACACAT +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTVERVN*HTSHTH
Trigger: ATGTGTGTGTGAAGTGTGGCAGTTTACTCTCTCCAC...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGTTGTATTTTCTGTTaGGCATGGCAGACCAAGAAG +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNSCIFC*AWQTKK
Trigger: CTTCTTGGTCTGCCATGCGCAACAGAAAATACAACT...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGAGTTGTATTTTCTGTTaGGCATGGCAGACCAAGAAG +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWSCIFC*AWQTKK
Trigger: CTTCTTGGTCTGCCATGCGCAACAGAAAATACAACT...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAACTGTCTGTTCCTATCTaGCTTATAATTAGTGACAGA +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQLSVPI*LIISDR
Trigger: TCTGTCACTAATTATAAGGCAGATAGGAACAGACAG...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCGCCCCGGCATTCTGCTaGATAAACATTGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFAPAFC*INIGLF
Trigger: AAAGAGGCCAATGTTTATCCAGCAGAATGCCGGGGC...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR CCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGTGGTGGTCCTCATCTTaGCAAAATCAGCCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWWWSSS*QNQPLC
Trigger: ACAGAGGGGCTGATTTTGCCAAGATGAGGACCACCA...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAGCCTGCGTACTGTGGTaGTCCTCATCTTGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSACVLW*SSSWQN
Trigger: ATTTTGCCAAGATGAGGACCACCACAGTACGCAGGC...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTATTGGTACATGTTCCGTaGACTCTGGTTGTGATCAGA +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVLVHVP*TLVVIR
Trigger: TCTGATCACAACCAGAGTCCACGGAACATGTACCAA...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCATTGGTACATGTTCCGTaGACTCTGGTTGTGATCAGA +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSLVHVP*TLVVIR
Trigger: TCTGATCACAACCAGAGTCCACGGAACATGTACCAA...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACATTGGTACATGTTCCGTaGACTCTGGTTGTGATCAGA +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTLVHVP*TLVVIR
Trigger: TCTGATCACAACCAGAGTCCACGGAACATGTACCAA...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATACGCTCATCTTTGAAAGCAAATTCAAAGGGAGGTATAGCCTGTAATCCCAATGTTTGCTTACCCATCTaGCATTGGTACATGTTCCGT +
Preference number: 4 (lower is better)
Translates to: IRSSLKANSKGGIACNPNVCLPI*HWYMFR
Trigger: ACGGAACATGTACCAATGCCAGATGGGTAAGCAAAC...ATTGGGATTACAGGCTATACCTCCCTTTGAATTTGCTTTCAAAGATGAGCGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTAGTTTGCTTACCCATCTaGCATTGGTACATGTTCCGT +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVVCLPI*HWYMFR
Trigger: ACGGAACATGTACCAATGCCAGATGGGTAAGCAAAC...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAATTGATAAGTGAGAAGTaGAAAGCCCATAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQLISEK*KAHSLL
Trigger: AAGCAAACTATGGGCTTTCCACTTCTCACTTATCAA...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACCATAATAATCATACATaGAGGGTCTCACCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNHNNHT*RVSPRD
Trigger: GTCCCTTGGTGAGACCCTCCATGTATGATTATTATG...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGCAGCAACGATGGCATTaGTCCCAATTGGATAGTTAT +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWQQRWH*SQLDSY
Trigger: ATAACTATCCAATTGGGACCAATGCCATCGTTGCTG...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACCAGCAACGATGGCATTaGTCCCAATTGGATAGTTAT +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNQQRWH*SQLDSY
Trigger: ATAACTATCCAATTGGGACCAATGCCATCGTTGCTG...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAAATCACAGCAACGATaGCATTGGTCCCAATTGGAT +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHKSQQR*HWSQLD
Trigger: ATCCAATTGGGACCAATGCCATCGTTGCTGTGATTT...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAAATCACAGCAACGATaGCATTGGTCCCAATTGGAT +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNKSQQR*HWSQLD
Trigger: ATCCAATTGGGACCAATGCCATCGTTGCTGTGATTT...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGAAATCACAGCAACGATaGCATTGGTCCCAATTGGAT +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWKSQQR*HWSQLD
Trigger: ATCCAATTGGGACCAATGCCATCGTTGCTGTGATTT...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAATTGAACAGAATGTCTaGGACCATCCCACTCTCAGT +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTIEQNV*DHPTLS
Trigger: ACTGAGAGTGGGATGGTCCCAGACATTCTGTTCAAT...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCACGGGATGGAAAACCATaGGGATTGAACAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSRDGKP*GLNRMS
Trigger: AGACATTCTGTTCAATCCCCATGGTTTTCCATCCCG...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTAAATGGTCATGCGGGATaGAAAACCATGGGGATTGAA +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVNGHAG*KTMGIE
Trigger: TTCAATCCCCATGGTTTTCCATCCCGCATGACCATT...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCAAATGGTCATGCGGGATaGAAAACCATGGGGATTGAA +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSNGHAG*KTMGIE
Trigger: TTCAATCCCCATGGTTTTCCATCCCGCATGACCATT...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATCAATTAACATCCCAATaGTCATGCGGGATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHQLTSQ*SCGMEN
Trigger: GTTTTCCATCCCGCATGACCATTGGGATGTTAATTG...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTAAAACGGATTCCACCCTaGACATTTCTTCCCCCAATA +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVKRIPP*TFLPPI
Trigger: TATTGGGGGAAGAAATGTCCAGGGTGGAATCCGTTT...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCAAAACGGATTCCACCCTaGACATTTCTTCCCCCAATA +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSKRIPP*TFLPPI
Trigger: TATTGGGGGAAGAAATGTCCAGGGTGGAATCCGTTT...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGATTTTCTGTTGCGCATaGCAGACCAAGAAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWIFCCA*QTKKGV
Trigger: CACCCCCTTCTTGGTCTGCCATGCGCAACAGAAAAT...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGGTTTTCAGGTCTTaGTTGAGAGTTCTAACACCG +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWLVFRS*LRVLTP
Trigger: CGGTGTTAGAACTCTCAACCAAGACCTGAAAACCAA...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATACTGTCCTGCTCAAGATaGATTAACAGGTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFILSCSR*INRCVT
Trigger: TGTCACACACCTGTTAATCCATCTTGAGCAGGACAG...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTACTTGAAATTTGTCTGAGACCATATGGCGTAAGCGCTGATAATAAACCACTCCTGTCCTGCTCAAGATaGATTAACAGGTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: LLEICLRPYGVSADNKPLLSCSR*INRCVT
Trigger: TGTCACACACCTGTTAATCCATCTTGAGCAGGACAG...GAGTGGTTTATTATCAGCGCTTACGCCATATGGTCTCAGACAAATTTCAAGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAAGCCTGGCTTCCAAAATaGATGAATCTTATTTCACTA +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQAWLPK*MNLISL
Trigger: TAGTGAAATAAGATTCATCCATTTTGGAAGCCAGGC...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTACTCTTTGGCTCTCATTaGCTCAGTCAATTAGGATCG +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVLFGSH*LSQLGS
Trigger: CGATCCTAATTGACTGAGCCAATGAGAGCCAAAGAG...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTACCTCACACAGTGCATTaGAACTCCATACTGAGTATA +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVPHTVH*NSILSI
Trigger: TATACTCAGTATGGAGTTTCAATGCACTGTGTGAGG...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR TCA 90 bp ATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGCCATTGATTATAGTGGAGGTTCATATTaGCAGCGGAATGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: ISPRHNQHSDDFFNAIDYSGGSY*QRNVLP
Trigger: GGGAAGAACATTCCGCTGTCAATATGAACCTCCACT...ATAATCAATGGCATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR TCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAAGTGGAGGTTCATATTaGCAGCGGAATGTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSSGGSY*QRNVLP
Trigger: GGGAAGAACATTCCGCTGTCAATATGAACCTCCACT...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACACAATCCTTAACATCTaGGAAACAGAGTTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNTILNI*ETEFLR
Trigger: CCTTAGGAACTCTGTTTCTCAGATGTTAAGGATTGT...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAGAAACACTGGTCTTCTaGGCCTTCTTATCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIETLVF*AFLSKA
Trigger: AGCTTTTGATAAGAAGGCTCAGAAGACCAGTGTTTC...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATATTTCAGAGAGGTCTATaGACTCAGACTTGTAGACAC +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIFQRGL*TQTCRH
Trigger: GTGTCTACAAGTCTGAGTTCATAGACCTCTCTGAAA...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAGAAAACCATGGGGATTaGACAGAATGTCTGGGACCA +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSENHGD*TECLGP
Trigger: TGGTCCCAGACATTCTGTTCAATCCCCATGGTTTTC...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTAATAAACCACTCCTATaGAGATGTCTGCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTNKPLL*RCLLPV
Trigger: AACTGGAAGCAGACATCTTCATAGGAGTGGTTTATT...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGAATAAACCACTCCTATaGAGATGTCTGCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWNKPLL*RCLLPV
Trigger: AACTGGAAGCAGACATCTTCATAGGAGTGGTTTATT...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGCCAGTTGTCCTTACTTaGAATTTGTCTGAGACCATA +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWPVVLT*NLSETI
Trigger: TATGGTCTCAGACAAATTTCAAGTAAGGACAACTGG...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATCCAGTTGTCCTTACTTaGAATTTGTCTGAGACCATA +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHPVVLT*NLSETI
Trigger: TATGGTCTCAGACAAATTTCAAGTAAGGACAACTGG...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGGAAACTTGTGGAGATaGCAGGTATGTTTATTACCC +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTGNLWR*QVCLLP
Trigger: GGGTAATAAACATACCTGTCATCTCCACAAGTTTCC...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTTCACTATGCTAAGTaGAATAAGCCAGTCACAGGA +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWFHYAK*NKPVTG
Trigger: TCCTGTGACTGGCTTATTTCACTTAGCATAGTGAAA...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTACACATGCAACACAAATaGGTGCATGTAAAATGGGTG +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVHMQHK*VHVKWV
Trigger: CACCCATTTTACATGCACTCATTTGTGTTGCATGTG...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR TCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGCTCAAGGGAATGGAGTaGAAAGGCCATTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWLKGME*KGHSQR
Trigger: CCTTTGAGAATGGCCTTTTCACTCCATTCCCTTGAG...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR TCA 90 bp TCAGACACTCACTGGGAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTACAGAATGCCAAGAAATaGATCACTTATACATTGCTG +
Preference number: 4 (lower is better)
Translates to: SDTHWESWDIIFKDKGGLQNAKK*ITYTLL
Trigger: CAGCAATGTATAAGTGATTCATTTCTTGGCATTCTG...TAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTCCCAGTGAGTGTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR GCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAATTTTGGTCTTATCATTaGAATGGGAAAATTTCTCCG +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQFWSYH*NGKISP
Trigger: CGGAGAAATTTTCCCATTGCAATGATAAGACCAAAA...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR GCA 90 bp TGTAAGAAATCACAGCAACGATGGCATTGGTCCCAATTGGATAGTTATCCATGTAGAAAAGCTGACAAGTaGCTTAAGTGCAAATCCCAA +
Preference number: 4 (lower is better)
Translates to: CKKSQQRWHWSQLDSYPCRKADK*LKCKSQ
Trigger: TTGGGATTTGCACTTAAGGCACTTGTCAGCTTTTCT...ACATGGATAACTATCCAATTGGGACCAATGCCATCGTTGCTGTGATTTCTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR GCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTAGAAAAGCTGACAAGTaGCTTAAGTGCAAATCCCAA +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTRKADK*LKCKSQ
Trigger: TTGGGATTTGCACTTAAGGCACTTGTCAGCTTTTCT...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCCAGGATTGTCCTCCATaGACTCTCCTTTGGCTAAAG +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFQDCPP*TLLWLK
Trigger: CTTTAGCCAAAGGAGAGTGCATGGAGGACAATCCTG...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGGGAAAGCCCATAGTTTaGTTACCCATCTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWGKPIV*LPIWHW
Trigger: CCAATGCCAGATGGGTAAGCAAACTATGGGCTTTCC...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp CTCCCAGTGTCATTACTGCACACTTTGATGTTATCCACAACACAATTTTCTTTATCCGTACTGCAGTTTTaGTCCTATAAACGGCAATCC +
Preference number: 4 (lower is better)
Translates to: LPVSLLHTLMLSTTQFSLSVLQF*SYKRQS
Trigger: GGATTGCCGTTTATAGGAGCAAAACTGCAGTACGGA...TAAAGAAAATTGTGTTGTGGATAACATCAAAGTGTGCAGTAATGACACTGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGCTTAAAATGCCCTTCTaGCCATGGCGACTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWLKMPF*PWRLAN
Trigger: ATTTGCCAGTCGCCATGGGCAGAAGGGCATTTTAAG...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTATATAACCTCTCGGTaGCATAGAAATTGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWYITSR*HRNCSQ
Trigger: CTGGCTACAATTTCTATGGCACCGAGAGGTTATATA...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAAGTTGTATTTTCTGTTaGGCATGGCAGACCAAGAAG +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTSCIFC*AWQTKK
Trigger: CTTCTTGGTCTGCCATGCGCAACAGAAAATACAACT...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCAAGTTGTATTTTCTGTTaGGCATGGCAGACCAAGAAG +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSSCIFC*AWQTKK
Trigger: CTTCTTGGTCTGCCATGCGCAACAGAAAATACAACT...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAATTTGATGTTCATAGCTaGCAGTTCAGCTACAAAATA +
Preference number: 4 (lower is better)
Translates to: RGQGNGELFNRYKASVMQFDVHS*QFSYKI
Trigger: TATTTTGTAGCTGAACTGGCAGCTATGAACATCAAA...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCCTGTCCTTGAACTCCTaGACTCAAATGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFLSLNS*TQMILP
Trigger: TGGGAGGATCATTTGAGTGCAGGAGTTCAAGGACAG...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTATTATACCTGATTGTTGCAGATGGTCCCTTTTaGAACTGTAGGTGGACTGAT +
Preference number: 4 (lower is better)
Translates to: ESWDIIFKDKGGLLYLIVADGPF*NCRWTD
Trigger: ATCAGTCCACCTACAGTTCCAAAAGGGACCATCTGC...AACAATCAGGTATAATAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCACGCAGCTTGCTCATTTaGGTACCAGTCAGGAACATT +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSRSLLI*VPVRNI
Trigger: AATGTTCCTGACTGGTACCCAAATGAGCAAGCTGCG...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCGGTGTGAGGACTTCCTaGTTCACCAAACTATCAGGA +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFGVRTS*FTKLSG
Trigger: TCCTGATAGTTTGGTGAACCAGGAAGTCCTCACACC...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGGGTGTGAGGACTTCCTaGTTCACCAAACTATCAGGA +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWGVRTS*FTKLSG
Trigger: TCCTGATAGTTTGGTGAACCAGGAAGTCCTCACACC...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGAGAATCTGCGATGCCTaGAGCAAGATCCTTATCCAC +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWRICDA*SKILIH
Trigger: GTGGATAAGGATCTTGCTCCAGGCATCGCAGATTCT...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp CATTGTAAAAATCCTCATCAAATTGTCAGTGTTCATGGAAACACTGGTCTTCTGTCCTGGGTACAGACTTaGTTTTCCTGTCATGGGTAT +
Preference number: 4 (lower is better)
Translates to: HCKNPHQIVSVHGNTGLLSWVQT*FSCHGY
Trigger: ATACCCATGACAGGAAAACCAAGTCTGTACCCAGGA...CAGAAGACCAGTGTTTCCATGAACACTGACAATTTGATGAGGATTTTTACAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAAAAAGGAACAATCCTaGGTACAGACTTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNKKEQS*VQTWFS
Trigger: GGAAAACCAAGTCTGTACCCAGGATTGTTCCTTTTT...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCTTACCCATCTGGCATTaGTACATGTTCCGTGGACTC +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFLPIWH*YMFRGL
Trigger: GAGTCCACGGAACATGTACCAATGCCAGATGGGTAA...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATACATAATAATCATACATaGAGGGTCTCACCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIHNNHT*RVSPRD
Trigger: GTCCCTTGGTGAGACCCTCCATGTATGATTATTATG...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATGGCATTGGTCCCAATTaGATAGTTATCCATGTCATA +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHGIGPN*IVIHVI
Trigger: TATGACATGGATAACTATCCAATTGGGACCAATGCC...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATACAGCAACGATGGCATTaGTCCCAATTGGATAGTTAT +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIQQRWH*SQLDSY
Trigger: ATAACTATCCAATTGGGACCAATGCCATCGTTGCTG...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AATGGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGCCAAATCACAGCAACGATaGCATTGGTCCCAATTGGAT +
Preference number: 4 (lower is better)
Translates to: NGKISPRHNQHSDDFFNAKSQQR*HWSQLD
Trigger: ATCCAATTGGGACCAATGCCATCGTTGCTGTGATTT...GGCATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp TTACTTGAAATTTGTCTGAGACCATATGGCGTAAGCGCTGATAATAAACCACTCAAATCACAGCAACGATaGCATTGGTCCCAATTGGAT +
Preference number: 4 (lower is better)
Translates to: LLEICLRPYGVSADNKPLKSQQR*HWSQLD
Trigger: ATCCAATTGGGACCAATGCCATCGTTGCTGTGATTT...GAGTGGTTTATTATCAGCGCTTACGCCATATGGTCTCAGACAAATTTCAAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAATGCCCTTCTGCCCATaGCGACTGGCAAATTTATCT +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSMPFCP*RLANLS
Trigger: AGATAAATTTGCCAGTCGCCATGGGCAGAAGGGCAT...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCATGCCCTTCTGCCCATaGCGACTGGCAAATTTATCT +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFMPFCP*RLANLS
Trigger: AGATAAATTTGCCAGTCGCCATGGGCAGAAGGGCAT...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTACAATTAACATCCCAATaGTCATGCGGGATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVQLTSQ*SCGMEN
Trigger: GTTTTCCATCCCGCATGACCATTGGGATGTTAATTG...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATACAATTAACATCCCAATaGTCATGCGGGATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIQLTSQ*SCGMEN
Trigger: GTTTTCCATCCCGCATGACCATTGGGATGTTAATTG...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAAAGGGTGTAGCATCATaGCAGAGACCATGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSKGVAS*QRPCKA
Trigger: AGCTTTGCATGGTCTCTGCCATGATGCTACACCCTT...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAAGGGTGTAGCATCATaGCAGAGACCATGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFKGVAS*QRPCKA
Trigger: AGCTTTGCATGGTCTCTGCCATGATGCTACACCCTT...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGAAGGGTGTAGCATCATaGCAGAGACCATGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWKGVAS*QRPCKA
Trigger: AGCTTTGCATGGTCTCTGCCATGATGCTACACCCTT...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GCAATGGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGTTGGTTTTCAGGTCTTaGTTGAGAGTTCTAACACCG +
Preference number: 4 (lower is better)
Translates to: AMGKFLRGIINIRMTFSMLVFRS*LRVLTP
Trigger: CGGTGTTAGAACTCTCAACCAAGACCTGAAAACCAA...CATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCCATTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCATTGGTTTTCAGGTCTTaGTTGAGAGTTCTAACACCG +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSLVFRS*LRVLTP
Trigger: CGGTGTTAGAACTCTCAACCAAGACCTGAAAACCAA...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATATTGGTTTTCAGGTCTTaGTTGAGAGTTCTAACACCG +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFILVFRS*LRVLTP
Trigger: CGGTGTTAGAACTCTCAACCAAGACCTGAAAACCAA...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAGCACAGCACCATGCCTaGCTTCCAAAATGGATGAAT +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSAQHHA*LPKWMN
Trigger: ATTCATCCATTTTGGAAGCCAGGCATGGTGCTGTGC...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATATACATGCAACTACCTaGATGTATCTCAAGGGAATG +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHIHATT*MYLKGM
Trigger: CATTCCCTTGAGATACATCCAGGTAGTTGCATGTAT...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CCA 90 bp TCAGACACTCACTGGGAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTAACTCACTGGGAGTCTTaGGATATAATCTTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: SDTHWESWDIIFKDKGGLTHWES*DIIFKD
Trigger: ATCTTTGAAGATTATATCCCAAGACTCCCAGTGAGT...TAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTCCCAGTGAGTGTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR TCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCAAGATACGCTCATCTTTaGAAGCAAATTCAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSRYAHL*KQIQRE
Trigger: CTCCCTTTGAATTTGCTTTCAAAGATGAGCGTATCT...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR TCA 90 bp GAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTATTATACCTGATTGTTGCTTGGATTTCACCATaGTGGGAACATAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: ESWDIIFKDKGGLLYLIVAWISP*WEHSQE
Trigger: TTCTTGGCTATGTTCCCATCATGGTGAAATCCAAGC...AACAATCAGGTATAATAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR TCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGGCTTGGATTTCACCATaGTGGGAACATAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWAWISP*WEHSQE
Trigger: TTCTTGGCTATGTTCCCATCATGGTGAAATCCAAGC...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR TCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAACAATCCTTAACATCTaGGAAACAGAGTTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFITILNI*ETEFLR
Trigger: CCTTAGGAACTCTGTTTCTCAGATGTTAAGGATTGT...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TTAAGGACCTGTTTTTGTGTCGAACAACCCTCTTCCATTACAATCCTTAACATCACAATCCTTAACATCTaGGAAACAGAGTTCCTAAGG +
Preference number: 4 (lower is better)
Translates to: LRTCFCVEQPSSITILNITILNI*ETEFLR
Trigger: CCTTAGGAACTCTGTTTCTCAGATGTTAAGGATTGT...GATGTTAAGGATTGTAATGGAAGAGGGTTGTTCGACACAAAAACAGGTCCTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000430293.1
CDS-3UTR TCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTAAGAGCTTTCGCGTCATaGGACAAAGCATATAAAACT +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVRAFAS*DKAYKT
Trigger: AGTTTTATATGCTTTGTCTCATGACGCGAAAGCTCT...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TTACTTGAAATTTGTCTGAGACCATATGGCGTAAGCGCTGATAATAAACCACTCAGAGCTTTCGCGTCATaGGACAAAGCATATAAAACT +
Preference number: 4 (lower is better)
Translates to: LLEICLRPYGVSADNKPLRAFAS*DKAYKT
Trigger: AGTTTTATATGCTTTGTCTCATGACGCGAAAGCTCT...GAGTGGTTTATTATCAGCGCTTACGCCATATGGTCTCAGACAAATTTCAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR TCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAAGAGCTTTCGCGTCATaGGACAAAGCATATAAAACT +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTRAFAS*DKAYKT
Trigger: AGTTTTATATGCTTTGTCTCATGACGCGAAAGCTCT...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAAGAGCTTTCGCGTCATaGGACAAAGCATATAAAACT +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIRAFAS*DKAYKT
Trigger: AGTTTTATATGCTTTGTCTCATGACGCGAAAGCTCT...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCATATACACAAACTGTGTaGCAACCTCACATACGGCAG +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSYTQTV*QPHIRQ
Trigger: CTGCCGTATGTGAGGTTGTCACACAGTTTGTGTATA...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp CACTCTCATAGTGATGCAAACACACTTGAATTTTCCACTCCCAGTGTCATTACTCATTACTGCACACTTTaGTGTTATCCACAACACAAT +
Preference number: 4 (lower is better)
Translates to: HSHSDANTLEFSTPSVITHYCTL*CYPQHN
Trigger: ATTGTGTTGTGGATAACATCAAAGTGTGCAGTAATG...AGTAATGACACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCACTATGAGAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR TCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATCATTACTGCACACTTTaGTGTTATCCACAACACAAT +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHHYCTL*CYPQHN
Trigger: ATTGTGTTGTGGATAACATCAAAGTGTGCAGTAATG...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTACCAGTTGTCCTTACTTaGAATTTGTCTGAGACCATA +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVPVVLT*NLSETI
Trigger: TATGGTCTCAGACAAATTTCAAGTAAGGACAACTGG...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAAGAAAAGATGTACCATaGGCTAAAAGCGCATCCCGT +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSRKDVP*AKSASR
Trigger: ACGGGATGCGCTTTTAGCTCATGGTACATCTTTTCT...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCATTGAAGAGGCGGTCATaGAGGAGAAAAGATGTACCA +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSLKRRS*RRKDVP
Trigger: TGGTACATCTTTTCTCCTTCATGACCGCCTCTTCAA...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGTTGAAGAGGCGGTCATaGAGGAGAAAAGATGTACCA +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWLKRRS*RRKDVP
Trigger: TGGTACATCTTTTCTCCTTCATGACCGCCTCTTCAA...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACATTTCACTATGCTAAGTaGAATAAGCCAGTCACAGGA +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTFHYAK*NKPVTG
Trigger: TCCTGTGACTGGCTTATTTCACTTAGCATAGTGAAA...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTGGCTTCCAAAATGGATaGATCTTATTTCACTATGCT +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTGFQNG*ILFHYA
Trigger: AGCATAGTGAAATAAGATTCATCCATTTTGGAAGCC...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTAGAAGGTTACGTAAGTTaGAAAGCTTGGATTTCACCA +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVEGYVS*KAWISP
Trigger: TGGTGAAATCCAAGCTTTGCAACTTACGTAACCTTC...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR GCA 90 bp GCAATGGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGGAAGGTTACGTAAGTTaGAAAGCTTGGATTTCACCA +
Preference number: 4 (lower is better)
Translates to: AMGKFLRGIINIRMTFSMEGYVS*KAWISP
Trigger: TGGTGAAATCCAAGCTTTGCAACTTACGTAACCTTC...CATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCCATTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR GCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAAGAAAAGCTGACAAGTaGCTTAAGTGCAAATCCCAA +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIRKADK*LKCKSQ
Trigger: TTGGGATTTGCACTTAAGGCACTTGTCAGCTTTTCT...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCATCCGTACTGCAGTTTTaGTCCTATAAACGGCAATCC +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSSVLQF*SYKRQS
Trigger: GGATTGCCGTTTATAGGAGCAAAACTGCAGTACGGA...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAGTGGAGAGAGTAAACTaGCACACTTCACACACACAT +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSVERVN*HTSHTH
Trigger: ATGTGTGTGTGAAGTGTGGCAGTTTACTCTCTCCAC...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGACAAGTGATTGCTCCTaGCTAGGCCTCCTAAAATGT +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWTSDCS*LGLLKC
Trigger: ACATTTTAGGAGGCCTAGGCAGGAGCAATCACTTGT...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR GCA 90 bp CCAGCAATCCCAGTCTTGAACACTTGTCCCAGGGAAATGAAACTTATGTTTACAGAACTATATATCACATaGAACACAAATGAGTGCATG +
Preference number: 4 (lower is better)
Translates to: PAIPVLNTCPREMKLMFTELYIT*NTNECM
Trigger: CATGCACTCATTTGTGTTGCATGTGATATATAGTTC...TGTAAACATAAGTTTCATTTCCCTGGGACAAGTGTTCAAGACTGGGATTGCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATTCTGGTTTTCCATTTTaGTCTTATCATTGCAATGGG +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHSGFPF*SYHCNG
Trigger: CCCATTGCAATGATAAGACCAAAATGGAAAACCAGA...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR CCA 90 bp CACTCTCATAGTGATGCAAACACACTTGAATTTTCCACTCCCAGTGTCATTACTTCTGGTTTTCCATTTTaGTCTTATCATTGCAATGGG +
Preference number: 4 (lower is better)
Translates to: HSHSDANTLEFSTPSVITSGFPF*SYHCNG
Trigger: CCCATTGCAATGATAAGACCAAAATGGAAAACCAGA...AGTAATGACACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCACTATGAGAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTTCTGGTTTTCCATTTTaGTCTTATCATTGCAATGGG +
Preference number: 4 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTSGFPF*SYHCNG
Trigger: CCCATTGCAATGATAAGACCAAAATGGAAAACCAGA...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR CCA 90 bp TGTGTGGTAACTCCAGCAAAAACTTCATCCTCAAAGATAGCGACATTCATGAAGGTATTGGATTTCAAGTaGATACAGATGCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: CVVTPAKTSSSKIATFMKVLDFK*IQMHWL
Trigger: TAACCAGTGCATCTGTATCCACTTGAAATCCAATAC...CTTCATGAATGTCGCTATCTTTGAGGATGAAGTTTTTGCTGGAGTTACCACACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCTCCTGGGTACAGACTTaGTTTTCCTGTCATGGGTAT +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFSWVQT*FSCHGY
Trigger: ATACCCATGACAGGAAAACCAAGTCTGTACCCAGGA...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGTCCTGGGTACAGACTTaGTTTTCCTGTCATGGGTAT +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWSWVQT*FSCHGY
Trigger: ATACCCATGACAGGAAAACCAAGTCTGTACCCAGGA...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCGTTTGCTTACCCATCTaGCATTGGTACATGTTCCGT +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFVCLPI*HWYMFR
Trigger: ACGGAACATGTACCAATGCCAGATGGGTAAGCAAAC...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGATAAGTGAGAAGTaGAAAGCCCATAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWLISEK*KAHSLL
Trigger: AAGCAAACTATGGGCTTTCCACTTCTCACTTATCAA...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATTTGATAAGTGAGAAGTaGAAAGCCCATAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHLISEK*KAHSLL
Trigger: AAGCAAACTATGGGCTTTCCACTTCTCACTTATCAA...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTAGGCATTGGTCCCAATTaGATAGTTATCCATGTCATA +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVGIGPN*IVIHVI
Trigger: TATGACATGGATAACTATCCAATTGGGACCAATGCC...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCAGGCATTGGTCCCAATTaGATAGTTATCCATGTCATA +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSGIGPN*IVIHVI
Trigger: TATGACATGGATAACTATCCAATTGGGACCAATGCC...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACCCTTATTCACAATCATaGCATCTTCCATATCATAGC +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNPYSQS*HLPYHS
Trigger: GCTATGATATGGAAGATGCCATGATTGTGAATAAGG...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGATTGAACAGAATGTCTaGGACCATCCCACTCTCAGT +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWIEQNV*DHPTLS
Trigger: ACTGAGAGTGGGATGGTCCCAGACATTCTGTTCAAT...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCATTGAACAGAATGTCTaGGACCATCCCACTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFIEQNV*DHPTLS
Trigger: ACTGAGAGTGGGATGGTCCCAGACATTCTGTTCAAT...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAATTGAACAGAATGTCTaGGACCATCCCACTCTCAGT +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSIEQNV*DHPTLS
Trigger: ACTGAGAGTGGGATGGTCCCAGACATTCTGTTCAAT...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGCGGGATGGAAAACCATaGGGATTGAACAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWRDGKP*GLNRMS
Trigger: AGACATTCTGTTCAATCCCCATGGTTTTCCATCCCG...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAAACGGATTCCACCCTaGACATTTCTTCCCCCAATA +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFKRIPP*TFLPPI
Trigger: TATTGGGGGAAGAAATGTCCAGGGTGGAATCCGTTT...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCCTGTCCTGCTCAAGATaGATTAACAGGTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFLSCSR*INRCVT
Trigger: TGTCACACACCTGTTAATCCATCTTGAGCAGGACAG...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATGAAAGAAAACATAAGTaGCACTCTACACACTGCTAT +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHERKHK*HSTHCY
Trigger: ATAGCAGTGTGTAGAGTGCCACTTATGTTTTCTTTC...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACGAAAGAAAACATAAGTaGCACTCTACACACTGCTAT +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNERKHK*HSTHCY
Trigger: ATAGCAGTGTGTAGAGTGCCACTTATGTTTTCTTTC...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTATGTATATACTATCCATaGTTTCAGACACTCACTGGG +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVCIYYP*FQTLTG
Trigger: CCCAGTGAGTGTCTGAAACCATGGATAGTATATACA...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR CAA 72 bp TTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTaGAGAGTTCTAACACCGTTGAAAAATCTCAAGAGT +
Preference number: 4 (lower is better)
Translates to: FRNLAYLVFRSW*RVLTPLKNLKS
Trigger: ACTCTTGAGATTTTTCAACGGTGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
3UTR CAA 72 bp AGTGGGCTGGTCCAAGTGCAATGGTGTTGCAACAAATaGATCACAACCACTTACAGATTTATTTGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SGLVQVQWCCNK*ITTTYRFICSF
Trigger: AAAAGAACAAATAAATCTGTAAGTGGTTGTGATCAATTTGTTGCAACACCATTGCACTTGGACCAGCCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR TCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCCTCAACACCTTAAAATaGCGAAGAGAATCTGCGATG +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFLNTLK*RRESAM
Trigger: CATCGCAGATTCTCTTCGTCATTTTAAGGTGTTGAG...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TCTGATAGTCCTCTTAATCCAAAAGGTCAACATCAAGTTAAACAACATCCAGTTTTTCAGAGAGGTCTATaGACTCAGACTTGTAGACAC +
Preference number: 4 (lower is better)
Translates to: SDSPLNPKGQHQVKQHPVFQRGL*TQTCRH
Trigger: GTGTCTACAAGTCTGAGTTCATAGACCTCTCTGAAA...AACTGGATGTTGTTTAACTTGATGTTGACCTTTTGGATTAAGAGGACTATCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR TCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGTTTCAGAGAGGTCTATaGACTCAGACTTGTAGACAC +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWFQRGL*TQTCRH
Trigger: GTGTCTACAAGTCTGAGTTCATAGACCTCTCTGAAA...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGGGAAACTTGTGGAGATaGCAGGTATGTTTATTACCC +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWGNLWR*QVCLLP
Trigger: GGGTAATAAACATACCTGTCATCTCCACAAGTTTCC...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTAGGCTTCCAAAATGGATaGATCTTATTTCACTATGCT +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVGFQNG*ILFHYA
Trigger: AGCATAGTGAAATAAGATTCATCCATTTTGGAAGCC...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTACAGTCTGAAAATATGTaGGAACAGTACATTTTGAGG +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVQSENM*EQYILR
Trigger: CCTCAAAATGTACTGTTCTCACATATTTTCAGACTG...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR TCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTACTTGTCCCAGGGAAATaGAACTTATGTTTACACAAT +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVLVPGK*NLCLHN
Trigger: ATTGTGTAAACATAAGTTTCATTTCCCTGGGACAAG...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR GCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACTTTTGGTCTTATCATTaGAATGGGAAAATTTCTCCG +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNFWSYH*NGKISP
Trigger: CGGAGAAATTTTCCCATTGCAATGATAAGACCAAAA...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR GCA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTTTGGTCTTATCATTaGAATGGGAAAATTTCTCCG +
Preference number: 4 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWFWSYH*NGKISP
Trigger: CGGAGAAATTTTCCCATTGCAATGATAAGACCAAAA...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR GCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATTTTGATGTTCATAGCTaGCAGTTCAGCTACAAAATA +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHFDVHS*QFSYKI
Trigger: TATTTTGTAGCTGAACTGGCAGCTATGAACATCAAA...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACTTTGATGTTCATAGCTaGCAGTTCAGCTACAAAATA +
Preference number: 4 (lower is better)
Translates to: EIQKPCILGFQVLVESSNFDVHS*QFSYKI
Trigger: TATTTTGTAGCTGAACTGGCAGCTATGAACATCAAA...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAGACTTGTCACCGTATaGTCTTCCATTTATCAATAT +
Preference number: 4 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHRLVTV*SSIYQY
Trigger: ATATTGATAAATGGAAGAGCATACGGTGACAAGTCT...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACATCACAGGACAAATATTaGATGATCCCACTATATGAG +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTSQDKY*MIPLYE
Trigger: CTCATATAGTGGGATCATGCAATATTTGTCCTGTGA...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATATCACAGGACAAATATTaGATGATCCCACTATATGAG +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFISQDKY*MIPLYE
Trigger: CTCATATAGTGGGATCATGCAATATTTGTCCTGTGA...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCATCACAGGACAAATATTaGATGATCCCACTATATGAG +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSSQDKY*MIPLYE
Trigger: CTCATATAGTGGGATCATGCAATATTTGTCCTGTGA...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTATCTGGTTTTCCATTTTaGTCTTATCATTGCAATGGG +
Preference number: 4 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVSGFPF*SYHCNG
Trigger: CCCATTGCAATGATAAGACCAAAATGGAAAACCAGA...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCCATAATAATCATACATaGAGGGTCTCACCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFHNNHT*RVSPRD
Trigger: GTCCCTTGGTGAGACCCTCCATGTATGATTATTATG...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCACAGCAACGATGGCATTaGTCCCAATTGGATAGTTAT +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSQQRWH*SQLDSY
Trigger: ATAACTATCCAATTGGGACCAATGCCATCGTTGCTG...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATACCTTATTCACAATCATaGCATCTTCCATATCATAGC +
Preference number: 4 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIPYSQS*HLPYHS
Trigger: GCTATGATATGGAAGATGCCATGATTGTGAATAAGG...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCACAATTAACATCCCAATaGTCATGCGGGATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSQLTSQ*SCGMEN
Trigger: GTTTTCCATCCCGCATGACCATTGGGATGTTAATTG...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCCAATTAACATCCCAATaGTCATGCGGGATGGAAAAC +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFQLTSQ*SCGMEN
Trigger: GTTTTCCATCCCGCATGACCATTGGGATGTTAATTG...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGTTGGTTTTCAGGTCTTaGTTGAGAGTTCTAACACCG +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWLVFRS*LRVLTP
Trigger: CGGTGTTAGAACTCTCAACCAAGACCTGAAAACCAA...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCATTGGTTTTCAGGTCTTaGTTGAGAGTTCTAACACCG +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSLVFRS*LRVLTP
Trigger: CGGTGTTAGAACTCTCAACCAAGACCTGAAAACCAA...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGCCTGGCTTCCAAAATaGATGAATCTTATTTCACTA +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTAWLPK*MNLISL
Trigger: TAGTGAAATAAGATTCATCCATTTTGGAAGCCAGGC...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCAGAAAGAAAACATAAGTaGCACTCTACACACTGCTAT +
Preference number: 4 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSERKHK*HSTHCY
Trigger: ATAGCAGTGTGTAGAGTGCCACTTATGTTTTCTTTC...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGAAAGAAAACATAAGTaGCACTCTACACACTGCTAT +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTERKHK*HSTHCY
Trigger: ATAGCAGTGTGTAGAGTGCCACTTATGTTTTCTTTC...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGTGTATCTCAAGGGAATaGAGTGAAAAGGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWCISRE*SEKAIL
Trigger: GAGAATGGCCTTTTCACTCCATTCCCTTGAGATACA...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAGTTTCAGACACTCACTaGGAGTCTTGGGATATAATC +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSVSDTH*ESWDII
Trigger: GATTATATCCCAAGACTCCCAGTGAGTGTCTGAAAC...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
3UTR CAA 72 bp TTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACACCGTaGAAAAATCTCAAGAGTAACCTGGTAATGATATCT +
Preference number: 4 (lower is better)
Translates to: LVFRSWLRVLTP*KNLKSNLVMIS
Trigger: AGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCTCAACCAAGACCTGAAAACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAAGATACGCTCATCTTTaGAAGCAAATTCAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSRYAHL*KQIQRE
Trigger: CTCCCTTTGAATTTGCTTTCAAAGATGAGCGTATCT...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR TCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAATAAACCACTCCTATaGAGATGTCTGCTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFNKPLL*RCLLPV
Trigger: AACTGGAAGCAGACATCTTCATAGGAGTGGTTTATT...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCCCAGTTGTCCTTACTTaGAATTTGTCTGAGACCATA +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFPVVLT*NLSETI
Trigger: TATGGTCTCAGACAAATTTCAAGTAAGGACAACTGG...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCGGTGTTGCAACAAATTaGTCACAACCACTTACAGAT +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFGVATN*SQPLTD
Trigger: ATCTGTAAGTGGTTGTGATCAATTTGTTGCAACACC...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR GCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAGAAGGTTACGTAAGTTaGAAAGCTTGGATTTCACCA +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSEGYVS*KAWISP
Trigger: TGGTGAAATCCAAGCTTTGCAACTTACGTAACCTTC...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR GCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCTATATAACCTCTCGGTaGCATAGAAATTGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFYITSR*HRNCSQ
Trigger: CTGGCTACAATTTCTATGGCACCGAGAGGTTATATA...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACATTTGATGTTCATAGCTaGCAGTTCAGCTACAAAATA +
Preference number: 4 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTFDVHS*QFSYKI
Trigger: TATTTTGTAGCTGAACTGGCAGCTATGAACATCAAA...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCATGTTCATGGAAACACTaGTCTTCTGAGCCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSCSWKH*SSEPSY
Trigger: ATAAGAAGGCTCAGAAGACCAGTGTTTCCATGAACA...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCTGTTCATGGAAACACTaGTCTTCTGAGCCTTCTTAT +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFCSWKH*SSEPSY
Trigger: ATAAGAAGGCTCAGAAGACCAGTGTTTCCATGAACA...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGAATTGTCAGTGTTCATaGAAACACTGGTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWNCQCS*KHWSSE
Trigger: CTCAGAAGACCAGTGTTTCCATGAACACTGACAATT...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAATTGTCAGTGTTCATaGAAACACTGGTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFNCQCS*KHWSSE
Trigger: CTCAGAAGACCAGTGTTTCCATGAACACTGACAATT...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAAAAAGGAACAATCCTaGGTACAGACTTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFKKEQS*VQTWFS
Trigger: GGAAAACCAAGTCTGTACCCAGGATTGTTCCTTTTT...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAAAAAAGGAACAATCCTaGGTACAGACTTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSKKEQS*VQTWFS
Trigger: GGAAAACCAAGTCTGTACCCAGGATTGTTCCTTTTT...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TCTGATAGTCCTCTTAATCCAAAAGGTCAACATCAAGTTAAACAACATCCAGTTGGCATTGGTCCCAATTaGATAGTTATCCATGTCATA +
Preference number: 4 (lower is better)
Translates to: SDSPLNPKGQHQVKQHPVGIGPN*IVIHVI
Trigger: TATGACATGGATAACTATCCAATTGGGACCAATGCC...AACTGGATGTTGTTTAACTTGATGTTGACCTTTTGGATTAAGAGGACTATCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGGGCATTGGTCCCAATTaGATAGTTATCCATGTCATA +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWGIGPN*IVIHVI
Trigger: TATGACATGGATAACTATCCAATTGGGACCAATGCC...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCGGCATTGGTCCCAATTaGATAGTTATCCATGTCATA +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFGIGPN*IVIHVI
Trigger: TATGACATGGATAACTATCCAATTGGGACCAATGCC...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCCATTACTGCACACTTTaGTGTTATCCACAACACAAT +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFHYCTL*CYPQHN
Trigger: ATTGTGTTGTGGATAACATCAAAGTGTGCAGTAATG...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR TCA 90 bp GAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTATTATACCTGATTGTTGGCTTCCAAAATGGATaGATCTTATTTCACTATGCT +
Preference number: 4 (lower is better)
Translates to: ESWDIIFKDKGGLLYLIVGFQNG*ILFHYA
Trigger: AGCATAGTGAAATAAGATTCATCCATTTTGGAAGCC...AACAATCAGGTATAATAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR TCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGAAAATGGGTGAAATTTaGATAAGCTCTGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWKMGEI*ISSVDC
Trigger: ACAGTCCACAGAGCTTATTCAAATTTCACCCATTTT...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR GCA 90 bp ACTCCCAGTGTCATTACTGCACACTTTGATGTTATCCACAACACAATTTTCTTTTTTGATGTTCATAGCTaGCAGTTCAGCTACAAAATA +
Preference number: 4 (lower is better)
Translates to: TPSVITAHFDVIHNTIFFFDVHS*QFSYKI
Trigger: TATTTTGTAGCTGAACTGGCAGCTATGAACATCAAA...AAAGAAAATTGTGTTGTGGATAACATCAAAGTGTGCAGTAATGACACTGGGAGT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGTCTGGTTTTCCATTTTaGTCTTATCATTGCAATGGG +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWSGFPF*SYHCNG
Trigger: CCCATTGCAATGATAAGACCAAAATGGAAAACCAGA...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR CCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGGTATTGGATTTCAAGTaGATACAGATGCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWVLDFK*IQMHWL
Trigger: TAACCAGTGCATCTGTATCCACTTGAAATCCAATAC...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGTTGATAAGTGAGAAGTaGAAAGCCCATAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWLISEK*KAHSLL
Trigger: AAGCAAACTATGGGCTTTCCACTTCTCACTTATCAA...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCTTGATAAGTGAGAAGTaGAAAGCCCATAGTTTGCTT +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFLISEK*KAHSLL
Trigger: AAGCAAACTATGGGCTTTCCACTTCTCACTTATCAA...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CCA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCCCTTATTCACAATCATaGCATCTTCCATATCATAGC +
Preference number: 4 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFPYSQS*HLPYHS
Trigger: GCTATGATATGGAAGATGCCATGATTGTGAATAAGG...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
3UTR CAA 72 bp TTCAGTTATGCAAGACAAGTAAGGTCTAAAGATCTGTaGTACAACATGGTGCCTGGAATTAACAATACTATA +
Preference number: 4 (lower is better)
Translates to: FSYARQVRSKDL*YNMVPGINNTI
Trigger: TATAGTATTGTTAATTCCAGGCACCATGTTGTACAACAGATCTTTAGACCTTACTTGTCTTGCATAACTGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR GCA 90 bp TCTGATAGTCCTCTTAATCCAAAAGGTCAACATCAAGTTAAACAACATCCAGTTTTTGATGTTCATAGCTaGCAGTTCAGCTACAAAATA +
Preference number: 4 (lower is better)
Translates to: SDSPLNPKGQHQVKQHPVFDVHS*QFSYKI
Trigger: TATTTTGTAGCTGAACTGGCAGCTATGAACATCAAA...AACTGGATGTTGTTTAACTTGATGTTGACCTTTTGGATTAAGAGGACTATCAGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR GCA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAGTATCTTGCTTATGTTaGTGTTTTCATCCATCTACA +
Preference number: 4 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSVSCLC*CFHPST
Trigger: TGTAGATGGATGAAAACAGCAACATAAGCAAGATAC...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS CCA 90 bp AGCACATGCATCTGGGGTCATACTGTGACCTCCCAGCCACCTCCCTaGGATTGGCCTCGCCGCGGCAAGGGCGCCGGCGGACGCCGCGCT +
Preference number: 5 (lower is better)
Translates to: STCIWGHTVTSQPPP*DWPRRGKGAGGRRA
Trigger: AGCGCGGCGTCCGCCGGCGCCCTTGCCGCGGCGAGGCCAATCCCAGGGAGGTGGCTGGGAGGTCACAGTATGACCCCAGATGCATGTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496238.5
CDS TCA 90 bp CCCGTCTCTGCACCGCGAGGCCGAGACCCTCGTGCACAGCGTAGTTaGAGGACTCCACGTGCGCCCGCGTCAGCTCCTGCAACGCTGCCT +
Preference number: 5 (lower is better)
Translates to: PVSAPRGRDPRAQRS*RTPRAPASAPATLP
Trigger: AGGCAGCGTTGCAGGAGCTGACGCGGGCGCACGTGGAGTCCTTCAACTACGCTGTGCACGAGGGTCTCGGCCTCGCGGTGCAGAGACGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS TCA 90 bp GTGACCCCTGCACCGCGAGGCCGAGACCCTCGTGCACAGCGTAGTTaGAGGACTCCACGTGCGCCCGCGTCAGCTCCTGCAACGCTGCCT +
Preference number: 5 (lower is better)
Translates to: VTPAPRGRDPRAQRS*RTPRAPASAPATLP
Trigger: AGGCAGCGTTGCAGGAGCTGACGCGGGCGCACGTGGAGTCCTTCAACTACGCTGTGCACGAGGGTCTCGGCCTCGCGGTGCAGGGGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448770.5
CDS TCA 90 bp AGGTGGACTGCACCGCGAGGCCGAGACCCTCGTGCACAGCGTAGTTaGAGGACTCCACGTGCGCCCGCGTCAGCTCCTGCAACGCTGCCT +
Preference number: 5 (lower is better)
Translates to: RWTAPRGRDPRAQRS*RTPRAPASAPATLP
Trigger: AGGCAGCGTTGCAGGAGCTGACGCGGGCGCACGTGGAGTCCTTCAACTACGCTGTGCACGAGGGTCTCGGCCTCGCGGTGCAGTCCACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424062.1
CDS TCA 90 bp TATCAGCCTGCACCGCGAGGCCGAGACCCTCGTGCACAGCGTAGTTaGAGGACTCCACGTGCGCCCGCGTCAGCTCCTGCAACGCTGCCT +
Preference number: 5 (lower is better)
Translates to: YQPAPRGRDPRAQRS*RTPRAPASAPATLP
Trigger: AGGCAGCGTTGCAGGAGCTGACGCGGGCGCACGTGGAGTCCTTCAACTACGCTGTGCACGAGGGTCTCGGCCTCGCGGTGCAGGCTGATA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417433.6
CDS TCA 90 bp GAAACTCCTGCACCGCGAGGCCGAGACCCTCGTGCACAGCGTAGTTaGAGGACTCCACGTGCGCCCGCGTCAGCTCCTGCAACGCTGCCT +
Preference number: 5 (lower is better)
Translates to: ETPAPRGRDPRAQRS*RTPRAPASAPATLP
Trigger: AGGCAGCGTTGCAGGAGCTGACGCGGGCGCACGTGGAGTCCTTCAACTACGCTGTGCACGAGGGTCTCGGCCTCGCGGTGCAGGAGTTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430293.1
ENST00000537335.5
CDS TCA 90 bp GCGGTTTCGGTTTCTCGGGGTCAACGTAGAACCAAAAACGTCGAGTaGACGGGCCGATTAAGGCCGTGTCCAGCCAGAGCGTGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: AVSVSRGQRRTKNVE*TGRLRPCPARAWRA
Trigger: GGCCCGCCACGCTCTGGCTGGACACGGCCTTAATCGGCCCGTTCACTCGACGTTTTTGGTTCTACGTTGACCCCGAGAAACCGAAACCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333990.10
ENST00000409894.7
ENST00000537335.5
CDS TCA 90 bp GCCAACCATGACACCGTCCAGCAGGACAGGGTAGCACTCACTGTATaGTCGGTGGGGAGCTCCATCAATGGGAGTGACCCCTGCACCGCG +
Preference number: 5 (lower is better)
Translates to: ANHDTVQQDRVALTV*SVGSSINGSDPCTA
Trigger: CGCGGTGCAGGGGTCACTCCCATTGATGGAGCTCCCCACCGATCATACAGTGAGTGCTACCCTGTCCTGCTGGACGGTGTCATGGTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448770.5
CDS GCA 90 bp GTAGTTGAAGGACTCCACGTGCGCCCGCGTCAGCTCCTGCAACGCTaGCTTTTGCTGTTCCCGCGGGATTCCATAAGAGGGGTCAGTCAA +
Preference number: 5 (lower is better)
Translates to: VVEGLHVRPRQLLQR*LLLFPRDSIRGVSQ
Trigger: TTGACTGACCCCTCTTATGGAATCCCGCGGGAACAGCAAAAGGCAGCGTTGCAGGAGCTGACGCGGGCGCACGTGGAGTCCTTCAACTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000424062.1
ENST00000430293.1
ENST00000430769.1
ENST00000438748.5
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS TCA 90 bp CTCAGGCTCTCTTCTGTTTCCCTTCACCTGTTCCCAGTCCCACGCTaGTGCCGACCCTGGGGAGTCATCCGGCCAAAGTCGTTGCTTCAA +
Preference number: 5 (lower is better)
Translates to: LRLSSVSLHLFPVPR*CRPWGVIRPKSLLQ
Trigger: TTGAAGCAACGACTTTGGCCGGATGACTCCCCAGGGTCGGCATCAGCGTGGGACTGGGAACAGGTGAAGGGAAACAGAAGAGAGCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537335.5
CDS-3UTR CAA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTCGTGGGTCACCAGGTTaGATGCCAAACACCAGGCTA +
Preference number: 5 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVRGSPG*MPNTRL
Trigger: TAGCCTGGTGTTTGGCATCAAACCTGGTGACCCACG...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTCCGCAGCTTGCTCATTaGGGTACCAGTCAGGAACAT +
Preference number: 5 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVPQLAH*GTSQEH
Trigger: ATGTTCCTGACTGGTACCCAAATGAGCAAGCTGCGG...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTGAGAAAGGGATGAAGTaGGCAATCACACTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVEKGMK*AITLSR
Trigger: CCTGCTGAGTGTGATTGCCAACTTCATCCCTTTCTC...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp CTGCCCATGGCGACTGGCAAATTTATCTCCGATAGTTGGGTTCCGAGGCACTCTCTTGAGCTCAGGAGTTaGAGACCAGGCTGGGCCACA +
Preference number: 5 (lower is better)
Translates to: LPMATGKFISDSWVPRHSLELRS*RPGWAT
Trigger: TGTGGCCCAGCCTGGTCTCAAACTCCTGAGCTCAAG...AGAGTGCCTCGGAACCCAACTATCGGAGATAAATTTGCCAGTCGCCATGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp TCTGCCTCCTCATGGTGCTCAATGAGGGCTTGTGGGGGAAGGTTACGTAAGTTGCAGGAACTCCGCAGCTaGCTCATTTGGGTACCAGTC +
Preference number: 5 (lower is better)
Translates to: SASSWCSMRACGGRLRKLQELRS*LIWVPV
Trigger: GACTGGTACCCAAATGAGCAAGCTGCGGAGTTCCTG...CAACTTACGTAACCTTCCCCCACAAGCCCTCATTGAGCACCATGAGGAGGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCCCCCCAATAGGCTGGTaGGTGACTCTGTCTCGGGCT +
Preference number: 5 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPPPIGW*VTLSRA
Trigger: AGCCCGAGACAGAGTCACCAACCAGCCTATTGGGGG...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
54% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TGCTCAATGAGGGCTTGTGGGGGAAGGTTACGTAAGTTGCAAAGCTTGGATTTCCTGCAACGCTGCCTTTaGCTGTTCCCGCGGGATTCC +
Preference number: 5 (lower is better)
Translates to: CSMRACGGRLRKLQSLDFLQRCL*LFPRDS
Trigger: GGAATCCCGCGGGAACAGCAAAAGGCAGCGTTGCAG...GAAATCCAAGCTTTGCAACTTACGTAACCTTCCCCCACAAGCCCTCATTGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR CAA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCTGCAACGCTGCCTTTaGCTGTTCCCGCGGGATTCC +
Preference number: 5 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYLQRCL*LFPRDS
Trigger: GGAATCCCGCGGGAACAGCAAAAGGCAGCGTTGCAG...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp CTGCCCATGGCGACTGGCAAATTTATCTCCGATAGTTGGGTTCCGAGGCACTCTCCGCAGCTTGCTCATTaGGGTACCAGTCAGGAACAT +
Preference number: 5 (lower is better)
Translates to: LPMATGKFISDSWVPRHSPQLAH*GTSQEH
Trigger: ATGTTCCTGACTGGTACCCAAATGAGCAAGCTGCGG...AGAGTGCCTCGGAACCCAACTATCGGAGATAAATTTGCCAGTCGCCATGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCCAGGAACTCCGCAGCTaGCTCATTTGGGTACCAGTC +
Preference number: 5 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSQELRS*LIWVPV
Trigger: GACTGGTACCCAAATGAGCAAGCTGCGGAGTTCCTG...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTTCCATGCACTCTCCTTaGGCTAAAGCAAAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVSMHSP*AKAKSF
Trigger: AAAGCTCTTTGCTTTAGCCAAAGGAGAGTGCATGGA...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTCGTATGAAGTTCAGCTaGTCAGCCACAACACAAAGT +
Preference number: 5 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVRMKFS*SATTQS
Trigger: ACTTTGTGTTGTGGCTGACAAGCTGAACTTCATACG...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTGTGGTGGTCCTCATCTaGGCAAAATCAGCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIVVVLI*AKSAPL
Trigger: CAGAGGGGCTGATTTTGCCAAGATGAGGACCACCAC...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTCCAATTAGCTCTTCTTaGCCCAATGCTAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVPISSS*PNAKFC
Trigger: GCAGAACTTAGCATTGGGCAAAGAAGAGCTAATTGG...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTGTGATGCAAACACACTaGAATTTTCCACTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVVMQTH*NFPLPV
Trigger: CACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCAC...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGCCCCCAATAGGCTGGTaGGTGACTCTGTCTCGGGCT +
Preference number: 5 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARPPIGW*VTLSRA
Trigger: AGCCCGAGACAGAGTCACCAACCAGCCTATTGGGGG...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AGCCAGCAGCCTTTAACATCTCACCAAAGTATTCTAAGGCCGAGTTCTCCTCTGCCCCCAATAGGCTGGTaGGTGACTCTGTCTCGGGCT +
Preference number: 5 (lower is better)
Translates to: SQQPLTSHQSILRPSSPLPPIGW*VTLSRA
Trigger: AGCCCGAGACAGAGTCACCAACCAGCCTATTGGGGG...CAGAGGAGAACTCGGCCTTAGAATACTTTGGTGAGATGTTAAAGGCTGCTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CAA 90 bp TTTGCTCCTATAAACGGCAATCCATCGTCATCTAACTTCTGCAGAACGCGTGGGCCCCCAATAGGCTGGTaGGTGACTCTGTCTCGGGCT +
Preference number: 5 (lower is better)
Translates to: FAPINGNPSSSNFCRTRGPPIGW*VTLSRA
Trigger: AGCCCGAGACAGAGTCACCAACCAGCCTATTGGGGG...CCCACGCGTTCTGCAGAAGTTAGATGACGATGGATTGCCGTTTATAGGAGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CAA 90 bp TGTGGGGGAAGGTTACGTAAGTTGCAAAGCTTGGATTTCACCATGATGGGAACACTGCAACGCTGCCTTTaGCTGTTCCCGCGGGATTCC +
Preference number: 5 (lower is better)
Translates to: CGGRLRKLQSLDFTMMGTLQRCL*LFPRDS
Trigger: GGAATCCCGCGGGAACAGCAAAAGGCAGCGTTGCAG...TGTTCCCATCATGGTGAAATCCAAGCTTTGCAACTTACGTAACCTTCCCCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR CAA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTCCGCAGCTTGCTCATTaGGGTACCAGTCAGGAACAT +
Preference number: 5 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIPQLAH*GTSQEH
Trigger: ATGTTCCTGACTGGTACCCAAATGAGCAAGCTGCGG...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp CAGAATGTCTGGGACCATCCCACTCTCAGTAAAAGGCATGTCCTCAGCCGGCCATGGAAAGCCCATAGTTaGCTTACCCATCTGGCATTG +
Preference number: 5 (lower is better)
Translates to: QNVWDHPTLSKRHVLSRPWKAHS*LTHLAL
Trigger: CAATGCCAGATGGGTAAGCAAACTATGGGCTTTCCA...TGGCCGGCTGAGGACATGCCTTTTACTGAGAGTGGGATGGTCCCAGACATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CAA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATAGGGTAGAAGGGTGGTaGCTAGGGGCCAGGGAAATG +
Preference number: 5 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYRVEGW*LGAREM
Trigger: CATTTCCCTGGCCCCTAGCAACCACCCTTCTACCCT...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCGAGCATGTGACCTCTTaGGCTCTCATTGGCTCAGTC +
Preference number: 5 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSEHVTS*ALIGSV
Trigger: GACTGAGCCAATGAGAGCCAAAGAGGTCACATGCTC...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537335.5
CDS-3UTR CAA 90 bp CATTTCCTCTGCCTCCTCATGGTGCTCAATGAGGGCTTGTGGGGGAAGGTTACGCGTAAGTTGCAAAGCTaGGATTTCACCATGATGGGA +
Preference number: 5 (lower is better)
Translates to: HFLCLLMVLNEGLWGKVTRKLQS*DFTMMG
Trigger: TCCCATCATGGTGAAATCCAAGCTTTGCAACTTACG...CGTAACCTTCCCCCACAAGCCCTCATTGAGCACCATGAGGAGGCAGAGGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR CAA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCCCGCAGCTTGCTCATTaGGGTACCAGTCAGGAACAT +
Preference number: 5 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPPQLAH*GTSQEH
Trigger: ATGTTCCTGACTGGTACCCAAATGAGCAAGCTGCGG...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTGGAAAACCATGGGGATaGAACAGAATGTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIGKPWG*NRMSGT
Trigger: GGTCCCAGACATTCTGTTCAATCCCCATGGTTTTCC...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp CAGGACTCTGGCAGCAGCCTGCGTACTGTGGTGGTCCTCATCTTGGCAAAATCAGTTTTCAGGTCTTGGTaGAGAGTTCTAACACCGTTG +
Preference number: 5 (lower is better)
Translates to: QDSGSSLRTVVVLILAKSVFRSW*RVLTPL
Trigger: CAACGGTGTTAGAACTCTCAACCAAGACCTGAAAAC...TGATTTTGCCAAGATGAGGACCACCACAGTACGCAGGCTGCTGCCAGAGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp CAGGTGTGTGACACTCACTGCCTGCTGAGAGCAGGGTGTAGGGAACCTGGGGTTAAACACTGTACCTGTTaGTTTTTACTTCAACGTGGC +
Preference number: 5 (lower is better)
Translates to: QVCDTHCLLRAGCREPGVKHCTC*FLLQRG
Trigger: GCCACGTTGAAGTAAAAACAAACAGGTACAGTGTTT...AACCCCAGGTTCCCTACACCCTGCTCTCAGCAGGCAGTGAGTGTCACACACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCATCCGGCCAAAGTCGTaGCTTCAACGAAAAAGCGGA +
Preference number: 5 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSIRPKS*LQRKSG
Trigger: TCCGCTTTTTCGTTGAAGCAACGACTTTGGCCGGAT...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537335.5
CDS-3UTR CAA 90 bp GCAATCACACTCAGCAGGCTGTGTGGAAAGAGTTCCTGGTGTGTGGTAACTCCACCATTCACTGCCCAGTaGATATCAGCTGTCAACTTC +
Preference number: 5 (lower is better)
Translates to: AITLSRLCGKSSWCVVTPPFTAQ*ISAVNF
Trigger: GAAGTTGACAGCTGATATCAACTGGGCAGTGAATGG...TGGAGTTACCACACACCAGGAACTCTTTCCACACAGCCTGCTGAGTGTGATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTACCAAACTATCAGGATaGTCCTCCATGCACTCTCCT +
Preference number: 5 (lower is better)
Translates to: GVGNLGLERRLVTVCSSITKLSG*SSMHSP
Trigger: AGGAGAGTGCATGGAGGACAATCCTGATAGTTTGGT...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TCTGCCTCCTCATGGTGCTCAATGAGGGCTTGTGGGGGAAGGTTACGTAAGTTGCCAATTAGCTCTTCTTaGCCCAATGCTAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: SASSWCSMRACGGRLRKLPISSS*PNAKFC
Trigger: GCAGAACTTAGCATTGGGCAAAGAAGAGCTAATTGG...CAACTTACGTAACCTTCCCCCACAAGCCCTCATTGAGCACCATGAGGAGGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCGAGAAAGGGATGAAGTaGGCAATCACACTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPEKGMK*AITLSR
Trigger: CCTGCTGAGTGTGATTGCCAACTTCATCCCTTTCTC...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp CATTTCCTCTGCCTCCTCATGGTGCTCAATGAGGGCTTGTGGGGGAAGGTTACGAGAAACCTTGCATACTaGGTTTTCAGGTCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: HFLCLLMVLNEGLWGKVTRNLAY*VFRSWL
Trigger: CAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCT...CGTAACCTTCCCCCACAAGCCCTCATTGAGCACCATGAGGAGGCAGAGGAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGAGGTGGGTGGATCACTaGAGGTCAGGGTCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARRWVDH*RSGSSR
Trigger: TCTTGAAGACCCTGACCTCAAGTGATCCACCCACCT...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTGTGAAAGTGTGTGGTaGGGATTCTTAACAGCAGGG +
Preference number: 5 (lower is better)
Translates to: GVGNLGLERRLVTVCSSICESVW*GFLTAG
Trigger: CCCTGCTGTTAAGAATCCCAACCACACACTTTCACA...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CAA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAACCCTCACACAGTGCATaGAAACTCCTGCACCGCGAG +
Preference number: 5 (lower is better)
Translates to: RGQGNGELFNRYKASVMQPSHSA*KLLHRE
Trigger: CTCGCGGTGCAGGAGTTTCAATGCACTGTGTGAGGG...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537335.5
CDS-3UTR CAA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATCTGCAACGCTGCCTTTaGCTGTTCCCGCGGGATTCC +
Preference number: 5 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHLQRCL*LFPRDS
Trigger: GGAATCCCGCGGGAACAGCAAAAGGCAGCGTTGCAG...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTCGTAAGTTGCAAAGCTaGGATTTCACCATGATGGGA +
Preference number: 5 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIRKLQS*DFTMMG
Trigger: TCCCATCATGGTGAAATCCAAGCTTTGCAACTTACG...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR CAA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCCCCTCACACAGTGCATaGAAACTCCATACTGAGTAT +
Preference number: 5 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSPSHSA*KLHTEY
Trigger: ATACTCAGTATGGAGTTTCAATGCACTGTGTGAGGG...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR CAA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCGTTAAGGACCTGTTTTaGTGTCGAACAACCCTCTTC +
Preference number: 5 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSVKDLF*CRTTLF
Trigger: GAAGAGGGTTGTTCGACACAAAAACAGGTCCTTAAC...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTCCATGCACTCTCCTTaGGCTAAAGCAAAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: GVGNLGLERRLVTVCSSISMHSP*AKAKSF
Trigger: AAAGCTCTTTGCTTTAGCCAAAGGAGAGTGCATGGA...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTCCAATTAGCTCTTCTTaGCCCAATGCTAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIPISSS*PNAKFC
Trigger: GCAGAACTTAGCATTGGGCAAAGAAGAGCTAATTGG...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCTTACCCATCTGGCATaGGTACATGTTCCGTGGACT +
Preference number: 5 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYLTHLA*VHVPWT
Trigger: AGTCCACGGAACATGTACCAATGCCAGATGGGTAAG...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AGACCATGCAAAGCTGCAGACTTCCCGGCCATACTCTCAATTAACATCCCAATGCTTACCCATCTGGCATaGGTACATGTTCCGTGGACT +
Preference number: 5 (lower is better)
Translates to: RPCKAADFPAILSINIPMLTHLA*VHVPWT
Trigger: AGTCCACGGAACATGTACCAATGCCAGATGGGTAAG...CATTGGGATGTTAATTGAGAGTATGGCCGGGAAGTCTGCAGCTTTGCATGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CAA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATGGAAAACCATGGGGATaGAACAGAATGTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYGKPWG*NRMSGT
Trigger: GGTCCCAGACATTCTGTTCAATCCCCATGGTTTTCC...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TTTGCTTACCCATCTGGCATTGGTACATGTTCCGTGGACTCTGGTTGTGATCAGGGAAAACCATGGGGATaGAACAGAATGTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: FAYPSGIGTCSVDSGCDQGKPWG*NRMSGT
Trigger: GGTCCCAGACATTCTGTTCAATCCCCATGGTTTTCC...CTGATCACAACCAGAGTCCACGGAACATGTACCAATGCCAGATGGGTAAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CAA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCTGTCTCGGGCTCCAGTaGTCCTTACTTGAAATTTGT +
Preference number: 5 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSCLGLQ*SLLEIC
Trigger: ACAAATTTCAAGTAAGGACAACTGGAGCCCGAGACA...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTCCCCCAATAGGCTGGTaGGTGACTCTGTCTCGGGCT +
Preference number: 5 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTPPIGW*VTLSRA
Trigger: AGCCCGAGACAGAGTCACCAACCAGCCTATTGGGGG...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCCAGTTGTATTTTCTGTaGCGCATGGCAGACCAAGAA +
Preference number: 5 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSQLYFL*RMADQE
Trigger: TTCTTGGTCTGCCATGCGCAACAGAAAATACAACTG...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp ACTTTCCCCGGTGTTGAGGTTGAGGTAGCTGTAATACGGATCTCCGTACTGCAGGTTTTCAGGTCTTGGTaGAGAGTTCTAACACCGTTG +
Preference number: 5 (lower is better)
Translates to: TFPGVEVEVAVIRISVLQVFRSW*RVLTPL
Trigger: CAACGGTGTTAGAACTCTCAACCAAGACCTGAAAAC...CTGCAGTACGGAGATCCGTATTACAGCTACCTCAACCTCAACACCGGGGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CAA 90 bp AGGGCTTGTGGGGGAAGGTTACGTAAGTTGCAAAGCTTGGATTTCACCATGATGGGTTGGAAAGGAGACTaGTCACCGTATGCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: RACGGRLRKLQSLDFTMMGWKGD*SPYALP
Trigger: TGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACC...CATCATGGTGAAATCCAAGCTTTGCAACTTACGTAACCTTCCCCCACAAGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTAGGTCTAAAGATCTGTaGTACAACATGGTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIRSKDL*YNMVPG
Trigger: TCCAGGCACCATGTTGTACAACAGATCTTTAGACCT...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGTTACCCAGGCTGTCCTaGAACTCCTGCACTCAAATG +
Preference number: 5 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARLPRLS*NSCTQM
Trigger: CATTTGAGTGCAGGAGTTCAAGGACAGCCTGGGTAA...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGACCTGTTTTTGTGTCGAACAACCCTCTTCCATTACAATCCTTAACATCTGAGCCCTCACACAGTGCATaGAAACTCCTGCACCGCGAG +
Preference number: 5 (lower is better)
Translates to: GPVFVSNNPLPLQSLTSEPSHSA*KLLHRE
Trigger: CTCGCGGTGCAGGAGTTTCAATGCACTGTGTGAGGG...CTCAGATGTTAAGGATTGTAATGGAAGAGGGTTGTTCGACACAAAAACAGGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430293.1
CDS-3UTR CAA 90 bp TGCTCAATGAGGGCTTGTGGGGGAAGGTTACGTAAGTTGCAAAGCTTGGATTTCCCATTCACTGCCCAGTaGATATCAGCTGTCAACTTC +
Preference number: 5 (lower is better)
Translates to: CSMRACGGRLRKLQSLDFPFTAQ*ISAVNF
Trigger: GAAGTTGACAGCTGATATCAACTGGGCAGTGAATGG...GAAATCCAAGCTTTGCAACTTACGTAACCTTCCCCCACAAGCCCTCATTGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR CAA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCTCCATGCACTCTCCTTaGGCTAAAGCAAAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPSMHSP*AKAKSF
Trigger: AAAGCTCTTTGCTTTAGCCAAAGGAGAGTGCATGGA...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGACCAAACTATCAGGATaGTCCTCCATGCACTCTCCT +
Preference number: 5 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARTKLSG*SSMHSP
Trigger: AGGAGAGTGCATGGAGGACAATCCTGATAGTTTGGT...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGATCCTGGGTACAGACTaGGTTTTCCTGTCATGGGTA +
Preference number: 5 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARILGTD*VFLSWV
Trigger: TACCCATGACAGGAAAACCAAGTCTGTACCCAGGAT...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATATCCTGGGTACAGACTaGGTTTTCCTGTCATGGGTA +
Preference number: 5 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYILGTD*VFLSWV
Trigger: TACCCATGACAGGAAAACCAAGTCTGTACCCAGGAT...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCGTGATGCAAACACACTaGAATTTTCCACTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPVMQTH*NFPLPV
Trigger: CACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCAC...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCACCCCCAATAGGCTGGTaGGTGACTCTGTCTCGGGCT +
Preference number: 5 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSPPIGW*VTLSRA
Trigger: AGCCCGAGACAGAGTCACCAACCAGCCTATTGGGGG...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GTAGCTGTAATACGGATCTCCGTACTGCAGTTTTGCTCCTATAAACGGCAATCCGGTTGGAAAGGAGACTaGTCACCGTATGCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: VAVIRISVLQFCSYKRQSGWKGD*SPYALP
Trigger: TGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACC...GGATTGCCGTTTATAGGAGCAAAACTGCAGTACGGAGATCCGTATTACAGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CAA 90 bp ACTTTCCCCGGTGTTGAGGTTGAGGTAGCTGTAATACGGATCTCCGTACTGCAGCAGCTTGCATTCTATTaGTATAGTACTGTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: TFPGVEVEVAVIRISVLQQLAFY*YSTVLL
Trigger: GAGCAGGACAGTACTATACAAATAGAATGCAAGCTG...CTGCAGTACGGAGATCCGTATTACAGCTACCTCAACCTCAACACCGGGGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTAGGGTAGAAGGGTGGTaGCTAGGGGCCAGGGAAATG +
Preference number: 5 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTRVEGW*LGAREM
Trigger: CATTTCCCTGGCCCCTAGCAACCACCCTTCTACCCT...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGGGTAGAAGGGTGGTaGCTAGGGGCCAGGGAAATG +
Preference number: 5 (lower is better)
Translates to: EIQKPCILGFQVLVESSNRVEGW*LGAREM
Trigger: CATTTCCCTGGCCCCTAGCAACCACCCTTCTACCCT...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTGAGATACGCTCATCTTaGAAAGCAAATTCAAAGGGA +
Preference number: 5 (lower is better)
Translates to: GVGNLGLERRLVTVCSSIEIRSS*KANSKG
Trigger: TCCCTTTGAATTTGCTTTCAAAGATGAGCGTATCTC...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR CAA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCCTCTGGTTTTCCATTTaGGTCTTATCATTGCAATGG +
Preference number: 5 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSLWFSI*VLSLQW
Trigger: CCATTGCAATGATAAGACCAAAATGGAAAACCAGAG...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR CAA 90 bp TCCTGGGTACAGACTTGGTTTTCCTGTCATGGGTATAAGGACCACTTCCATCCACCCTCACACAGTGCATaGAAACTCCATACTGAGTAT +
Preference number: 5 (lower is better)
Translates to: SWVQTWFSCHGYKDHFHPPSHSA*KLHTEY
Trigger: ATACTCAGTATGGAGTTTCAATGCACTGTGTGAGGG...TGGATGGAAGTGGTCCTTATACCCATGACAGGAAAACCAAGTCTGTACCCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCCCTCACACAGTGCATaGAAACTCCATACTGAGTAT +
Preference number: 5 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYPSHSA*KLHTEY
Trigger: ATACTCAGTATGGAGTTTCAATGCACTGTGTGAGGG...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR CAA 90 bp GTCACTGCGACTACACAGAGTACAGTTGTATTTTCTGTTGCGCATGGCAGACCAGTTAAGGACCTGTTTTaGTGTCGAACAACCCTCTTC +
Preference number: 5 (lower is better)
Translates to: VTATTQSTVVFSVAHGRPVKDLF*CRTTLF
Trigger: GAAGAGGGTTGTTCGACACAAAAACAGGTCCTTAAC...TGGTCTGCCATGCGCAACAGAAAATACAACTGTACTCTGTGTAGTCGCAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATCAGGAACTCCGCAGCTaGCTCATTTGGGTACCAGTC +
Preference number: 5 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHQELRS*LIWVPV
Trigger: GACTGGTACCCAAATGAGCAAGCTGCGGAGTTCCTG...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTCAGGAACTCCGCAGCTaGCTCATTTGGGTACCAGTC +
Preference number: 5 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTQELRS*LIWVPV
Trigger: GACTGGTACCCAAATGAGCAAGCTGCGGAGTTCCTG...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TGTGGGGGAAGGTTACGTAAGTTGCAAAGCTTGGATTTCACCATGATGGGAACAATCCTGGGTACAGACTaGGTTTTCCTGTCATGGGTA +
Preference number: 5 (lower is better)
Translates to: CGGRLRKLQSLDFTMMGTILGTD*VFLSWV
Trigger: TACCCATGACAGGAAAACCAAGTCTGTACCCAGGAT...TGTTCCCATCATGGTGAAATCCAAGCTTTGCAACTTACGTAACCTTCCCCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAAGAGAAAGGGATGAAGTaGGCAATCACACTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RGQGNGELFNRYKASVMQEKGMK*AITLSR
Trigger: CCTGCTGAGTGTGATTGCCAACTTCATCCCTTTCTC...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp CTTCCATGGGCAAAGCCTCGTTCCCAAGAGGCCTTATTCACAATCATGGCATCTGTTATCCGATCGGTCTaGATAAGTGAGAAGTGGAAA +
Preference number: 5 (lower is better)
Translates to: LPWAKPRSQEALFTIMASVIRSV*ISEKWK
Trigger: TTTCCACTTCTCACTTATCAAGACCGATCGGATAAC...AGATGCCATGATTGTGAATAAGGCCTCTTGGGAACGAGGCTTTGCCCATGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CAA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCGTTATCCGATCGGTCTaGATAAGTGAGAAGTGGAAA +
Preference number: 5 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPVIRSV*ISEKWK
Trigger: TTTCCACTTCTCACTTATCAAGACCGATCGGATAAC...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TGGGTGGATCACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCTGGCATTGGTCCCAATaGGATAGTTATCCATGTCAT +
Preference number: 5 (lower is better)
Translates to: WVDHLRSGSSRQGLPILPWHWSQ*DSYPCH
Trigger: ATGACATGGATAACTATCCAATTGGGACCAATGCCA...GGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTGATCCACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACCGTGGGTCACCAGGTTaGATGCCAAACACCAGGCTA +
Preference number: 5 (lower is better)
Translates to: EIQKPCILGFQVLVESSNRGSPG*MPNTRL
Trigger: TAGCCTGGTGTTTGGCATCAAACCTGGTGACCCACG...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGCGTGGGTCACCAGGTTaGATGCCAAACACCAGGCTA +
Preference number: 5 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWRGSPG*MPNTRL
Trigger: TAGCCTGGTGTTTGGCATCAAACCTGGTGACCCACG...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATCGTGGGTCACCAGGTTaGATGCCAAACACCAGGCTA +
Preference number: 5 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHRGSPG*MPNTRL
Trigger: TAGCCTGGTGTTTGGCATCAAACCTGGTGACCCACG...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTCGTGGGTCACCAGGTTaGATGCCAAACACCAGGCTA +
Preference number: 5 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTRGSPG*MPNTRL
Trigger: TAGCCTGGTGTTTGGCATCAAACCTGGTGACCCACG...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AGCCAGCAGCCTTTAACATCTCACCAAAGTATTCTAAGGCCGAGTTCTCCTCTGGTGATGCAAACACACTaGAATTTTCCACTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: SQQPLTSHQSILRPSSPLVMQTH*NFPLPV
Trigger: CACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCAC...CAGAGGAGAACTCGGCCTTAGAATACTTTGGTGAGATGTTAAAGGCTGCTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CAA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATTGTCTCGGGCTCCAGTaGTCCTTACTTGAAATTTGT +
Preference number: 5 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYCLGLQ*SLLEIC
Trigger: ACAAATTTCAAGTAAGGACAACTGGAGCCCGAGACA...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGCAGTTGTATTTTCTGTaGCGCATGGCAGACCAAGAA +
Preference number: 5 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARQLYFL*RMADQE
Trigger: TTCTTGGTCTGCCATGCGCAACAGAAAATACAACTG...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAATTACCCAGGCTGTCCTaGAACTCCTGCACTCAAATG +
Preference number: 5 (lower is better)
Translates to: RGQGNGELFNRYKASVMQLPRLS*NSCTQM
Trigger: CATTTGAGTGCAGGAGTTCAAGGACAGCCTGGGTAA...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp CCAGCAATCCCAGTCTTGAACACTTGTCCCAGGGAAATGAAACTTATGTTTACATCTAGTCTTGCTCTGTaGCCCAGGTTGCTGTGCAGT +
Preference number: 5 (lower is better)
Translates to: PAIPVLNTCPREMKLMFTSSLAL*PRLLCS
Trigger: ACTGCACAGCAACCTGGGCAACAGAGCAAGACTAGA...TGTAAACATAAGTTTCATTTCCCTGGGACAAGTGTTCAAGACTGGGATTGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CAA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGCTGCAACGCTGCCTTTaGCTGTTCCCGCGGGATTCC +
Preference number: 5 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWLQRCL*LFPRDS
Trigger: GGAATCCCGCGGGAACAGCAAAAGGCAGCGTTGCAG...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATCCGCAGCTTGCTCATTaGGGTACCAGTCAGGAACAT +
Preference number: 5 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHPQLAH*GTSQEH
Trigger: ATGTTCCTGACTGGTACCCAAATGAGCAAGCTGCGG...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACACAGGAACTCCGCAGCTaGCTCATTTGGGTACCAGTC +
Preference number: 5 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTQELRS*LIWVPV
Trigger: GACTGGTACCCAAATGAGCAAGCTGCGGAGTTCCTG...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGCCATTGTGGTGGTCCTCATCTaGGCAAAATCAGCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: GKISPRHNQHSDDFFNAIVVVLI*AKSAPL
Trigger: CAGAGGGGCTGATTTTGCCAAGATGAGGACCACCAC...AATGGCATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAGTGGTGGTCCTCATCTaGGCAAAATCAGCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIVVVLI*AKSAPL
Trigger: CAGAGGGGCTGATTTTGCCAAGATGAGGACCACCAC...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TCAGACACTCACTGGGAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTAGGAGTGACCCCCAAGTaGCACAGTAAAGCTGGAATA +
Preference number: 5 (lower is better)
Translates to: SDTHWESWDIIFKDKGGLGVTPK*HSKAGI
Trigger: TATTCCAGCTTTACTGTGCAACTTGGGGGTCACTCC...TAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTCCCAGTGAGTGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CAA 90 bp GGAAAACCATGGGGATTGAACAGAATGTCTGGGACCATCCCACTCTCAGTAAAACCAATTAGCTCTTCTTaGCCCAATGCTAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: GKPWGLNRMSGTIPLSVKPISSS*PNAKFC
Trigger: GCAGAACTTAGCATTGGGCAAAGAAGAGCTAATTGG...TTTTACTGAGAGTGGGATGGTCCCAGACATTCTGTTCAATCCCCATGGTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CAA 90 bp AGACCATGCAAAGCTGCAGACTTCCCGGCCATACTCTCAATTAACATCCCAATGTGGCATTGGTCCCAATaGGATAGTTATCCATGTCAT +
Preference number: 5 (lower is better)
Translates to: RPCKAADFPAILSINIPMWHWSQ*DSYPCH
Trigger: ATGACATGGATAACTATCCAATTGGGACCAATGCCA...CATTGGGATGTTAATTGAGAGTATGGCCGGGAAGTCTGCAGCTTTGCATGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CAA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTACGTGGGTCACCAGGTTaGATGCCAAACACCAGGCTA +
Preference number: 5 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVRGSPG*MPNTRL
Trigger: TAGCCTGGTGTTTGGCATCAAACCTGGTGACCCACG...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp CACTTGAGGTCAGGGTCTTCAAGACAGGGTCTTCCTATATTACCCAGGCTGTCCTCATTACTGCACACTTaGATGTTATCCACAACACAA +
Preference number: 5 (lower is better)
Translates to: HLRSGSSRQGLPILPRLSSLLHT*MLSTTQ
Trigger: TTGTGTTGTGGATAACATCAAAGTGTGCAGTAATGA...GGACAGCCTGGGTAATATAGGAAGACCCTGTCTTGAAGACCCTGACCTCAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGTGTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTCATTACTGCACACTTaGATGTTATCCACAACACAA +
Preference number: 5 (lower is better)
Translates to: GVGNLGLERRLVTVCSSISLLHT*MLSTTQ
Trigger: TTGTGTTGTGGATAACATCAAAGTGTGCAGTAATGA...AATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp ACGATACAGTTTGTTATCCGATCGGTCTTGATAAGTGAGAAGTGGAAAGCCCATGGAAAACCATGGGGATaGAACAGAATGTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: TIQFVIRSVLISEKWKAHGKPWG*NRMSGT
Trigger: GGTCCCAGACATTCTGTTCAATCCCCATGGTTTTCC...ATGGGCTTTCCACTTCTCACTTATCAAGACCGATCGGATAACAAACTGTATCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CAA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCCCCCCAATAGGCTGGTaGGTGACTCTGTCTCGGGCT +
Preference number: 5 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFPPIGW*VTLSRA
Trigger: AGCCCGAGACAGAGTCACCAACCAGCCTATTGGGGG...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGGTGGGTGGATCACTaGAGGTCAGGGTCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: EIQKPCILGFQVLVESSNRWVDH*RSGSSR
Trigger: TCTTGAAGACCCTGACCTCAAGTGATCCACCCACCT...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTATTATACCTGATTGTTGCTCTGTTGCCCAGGTaGCTGTGCAGTGGCGTGATC +
Preference number: 5 (lower is better)
Translates to: ESWDIIFKDKGGLLYLIVALLPR*LCSGVI
Trigger: GATCACGCCACTGCACAGCAACCTGGGCAACAGAGC...AACAATCAGGTATAATAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS CCA 90 bp TTGAAAGCAAATTCAAAGGGAGGTATAGCCTGTAATCCCAATATTTaGGAGACCGAGAGAGGAGGACTACTTGAGCTCAGGAGTTTGAGA +
Preference number: 5 (lower is better)
Translates to: LKANSKGGIACNPNI*ETERGGLLELRSLR
Trigger: TCTCAAACTCCTGAGCTCAAGTAGTCCTCCTCTCTCGGTCTCCCAAATATTGGGATTACAGGCTATACCTCCCTTTGAATTTGCTTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGGAGATACGCTCATCTTaGAAAGCAAATTCAAAGGGA +
Preference number: 5 (lower is better)
Translates to: CNSQTHRNRVEGWLLGAREIRSS*KANSKG
Trigger: TCCCTTTGAATTTGCTTTCAAAGATGAGCGTATCTC...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR CAA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAAGGAAGGTTACGTAAGTaGCAAAGCTTGGATTTCACC +
Preference number: 5 (lower is better)
Translates to: RGQGNGELFNRYKASVMQGRLRK*QSLDFT
Trigger: GGTGAAATCCAAGCTTTGCAACTTACGTAACCTTCC...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR CAA 90 bp TGTAGACACTTCCATGGGCAAAGCCTCGTTCCCAAGAGGCCTTATTCACAATCACTCTGGTTTTCCATTTaGGTCTTATCATTGCAATGG +
Preference number: 5 (lower is better)
Translates to: CRHFHGQSLVPKRPYSQSLWFSI*VLSLQW
Trigger: CCATTGCAATGATAAGACCAAAATGGAAAACCAGAG...TGATTGTGAATAAGGCCTCTTGGGAACGAGGCTTTGCCCATGGAAGTGTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp GTAGGGAACCTGGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATTACCAGTCAGGAACATaGAGTTTTACTCTGAAGCAT +
Preference number: 5 (lower is better)
Translates to: VGNLGLERRLVTVCSSIYYQSGT*SFTLKH
Trigger: ATGCTTCAGAGTAAAACTCAATGTTCCTGACTGGTA...ATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCCAGGTTCCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TGTAGACACTTCCATGGGCAAAGCCTCGTTCCCAAGAGGCCTTATTCACAATCATACCAGTCAGGAACATaGAGTTTTACTCTGAAGCAT +
Preference number: 5 (lower is better)
Translates to: CRHFHGQSLVPKRPYSQSYQSGT*SFTLKH
Trigger: ATGCTTCAGAGTAAAACTCAATGTTCCTGACTGGTA...TGATTGTGAATAAGGCCTCTTGGGAACGAGGCTTTGCCCATGGAAGTGTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACGGAGTGACCCCCAAGTaGCACAGTAAAGCTGGAATA +
Preference number: 5 (lower is better)
Translates to: EIQKPCILGFQVLVESSNGVTPK*HSKAGI
Trigger: TATTCCAGCTTTACTGTGCAACTTGGGGGTCACTCC...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAACCAATTAGCTCTTCTTaGCCCAATGCTAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: RGQGNGELFNRYKASVMQPISSS*PNAKFC
Trigger: GCAGAACTTAGCATTGGGCAAAGAAGAGCTAATTGG...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATGAGAAAGGGATGAAGTaGGCAATCACACTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHEKGMK*AITLSR
Trigger: CCTGCTGAGTGTGATTGCCAACTTCATCCCTTTCTC...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp ATAGTGATGCAAACACACTTGAATTTTCCACTCCCAGTGTCATTACTGCACACTGAGAAAGGGATGAAGTaGGCAATCACACTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: IVMQTHLNFPLPVSLLHTEKGMK*AITLSR
Trigger: CCTGCTGAGTGTGATTGCCAACTTCATCCCTTTCTC...AGTGTGCAGTAATGACACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CAA 90 bp AGGGGCCAGGGAAATGGAGAGTTGTTCAACAGGTATAAAGCTTCAGTTATGCAAGTGATGCAAACACACTaGAATTTTCCACTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: RGQGNGELFNRYKASVMQVMQTH*NFPLPV
Trigger: CACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCAC...TTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATTTCCCTGGCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACGGAAAACCATGGGGATaGAACAGAATGTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: EIQKPCILGFQVLVESSNGKPWG*NRMSGT
Trigger: GGTCCCAGACATTCTGTTCAATCCCCATGGTTTTCC...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AATGTTCTTCCCTCACACAGTGCATTGAAACTCCATACTGAGTATAACCAGGCCCAGTTGTATTTTCTGTaGCGCATGGCAGACCAAGAA +
Preference number: 5 (lower is better)
Translates to: NVLPSHSALKLHTEYNQAQLYFL*RMADQE
Trigger: TTCTTGGTCTGCCATGCGCAACAGAAAATACAACTG...GGCCTGGTTATACTCAGTATGGAGTTTCAATGCACTGTGTGAGGGAAGAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp GTAGCTGTAATACGGATCTCCGTACTGCAGTTTTGCTCCTATAAACGGCAATCCCTACACAGAGTACAGTaGTATTTTCTGTTGCGCATG +
Preference number: 5 (lower is better)
Translates to: VAVIRISVLQFCSYKRQSLHRVQ*YFLLRM
Trigger: CATGCGCAACAGAAAATACAACTGTACTCTGTGTAG...GGATTGCCGTTTATAGGAGCAAAACTGCAGTACGGAGATCCGTATTACAGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CAA 90 bp GTAGCTGTAATACGGATCTCCGTACTGCAGTTTTGCTCCTATAAACGGCAATCCAGAAACCTTGCATACTaGGTTTTCAGGTCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: VAVIRISVLQFCSYKRQSRNLAY*VFRSWL
Trigger: CAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCT...GGATTGCCGTTTATAGGAGCAAAACTGCAGTACGGAGATCCGTATTACAGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CAA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAAGGTGGGTGGATCACTaGAGGTCAGGGTCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIRWVDH*RSGSSR
Trigger: TCTTGAAGACCCTGACCTCAAGTGATCCACCCACCT...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCACCATTCACTGCCCAGTaGATATCAGCCTGCACCGCG +
Preference number: 5 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSPFTAQ*ISACTA
Trigger: CGCGGTGCAGGCTGATATCAACTGGGCAGTGAATGG...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417433.6
CDS-3UTR CAA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGCCATTCACTGCCCAGTaGATATCAGCTGTCAACTTC +
Preference number: 5 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWPFTAQ*ISAVNF
Trigger: GAAGTTGACAGCTGATATCAACTGGGCAGTGAATGG...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR CAA 90 bp GTGTCGAACAACCCTCTTCCATTACAATCCTTAACATCTGAGAAACAGAGTTCCGTTAAGGACCTGTTTTaGTGTCGAACAACCCTCTTC +
Preference number: 5 (lower is better)
Translates to: VSNNPLPLQSLTSEKQSSVKDLF*CRTTLF
Trigger: GAAGAGGGTTGTTCGACACAAAAACAGGTCCTTAAC...GGAACTCTGTTTCTCAGATGTTAAGGATTGTAATGGAAGAGGGTTGTTCGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000430293.1
CDS-3UTR CAA 90 bp CACTCTCATAGTGATGCAAACACACTTGAATTTTCCACTCCCAGTGTCATTACTACCAAACTATCAGGATaGTCCTCCATGCACTCTCCT +
Preference number: 5 (lower is better)
Translates to: HSHSDANTLEFSTPSVITTKLSG*SSMHSP
Trigger: AGGAGAGTGCATGGAGGACAATCCTGATAGTTTGGT...AGTAATGACACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCACTATGAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTACCAAACTATCAGGATaGTCCTCCATGCACTCTCCT +
Preference number: 5 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTTKLSG*SSMHSP
Trigger: AGGAGAGTGCATGGAGGACAATCCTGATAGTTTGGT...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATACCAAACTATCAGGATaGTCCTCCATGCACTCTCCT +
Preference number: 5 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHTKLSG*SSMHSP
Trigger: AGGAGAGTGCATGGAGGACAATCCTGATAGTTTGGT...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACACCAAACTATCAGGATaGTCCTCCATGCACTCTCCT +
Preference number: 5 (lower is better)
Translates to: EIQKPCILGFQVLVESSNTKLSG*SSMHSP
Trigger: AGGAGAGTGCATGGAGGACAATCCTGATAGTTTGGT...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp CCAGCAATCCCAGTCTTGAACACTTGTCCCAGGGAAATGAAACTTATGTTTACACGTATGAAGTTCAGCTaGTCAGCCACAACACAAAGT +
Preference number: 5 (lower is better)
Translates to: PAIPVLNTCPREMKLMFTRMKFS*SATTQS
Trigger: ACTTTGTGTTGTGGCTGACAAGCTGAACTTCATACG...TGTAAACATAAGTTTCATTTCCCTGGGACAAGTGTTCAAGACTGGGATTGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CAA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCGTGGTGGTCCTCATCTaGGCAAAATCAGCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFVVVLI*AKSAPL
Trigger: CAGAGGGGCTGATTTTGCCAAGATGAGGACCACCAC...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAGTGGTGGTCCTCATCTaGGCAAAATCAGCCCCTCTG +
Preference number: 5 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSVVVLI*AKSAPL
Trigger: CAGAGGGGCTGATTTTGCCAAGATGAGGACCACCAC...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AATGGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGCCGGAGTGACCCCCAAGTaGCACAGTAAAGCTGGAATA +
Preference number: 5 (lower is better)
Translates to: NGKISPRHNQHSDDFFNAGVTPK*HSKAGI
Trigger: TATTCCAGCTTTACTGTGCAACTTGGGGGTCACTCC...GGCATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp TGTGTGGTAACTCCAGCAAAAACTTCATCCTCAAAGATAGCGACATTCATGAAGATCCTGGGTACAGACTaGGTTTTCCTGTCATGGGTA +
Preference number: 5 (lower is better)
Translates to: CVVTPAKTSSSKIATFMKILGTD*VFLSWV
Trigger: TACCCATGACAGGAAAACCAAGTCTGTACCCAGGAT...CTTCATGAATGTCGCTATCTTTGAGGATGAAGTTTTTGCTGGAGTTACCACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CAA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACACTTACCCATCTGGCATaGGTACATGTTCCGTGGACT +
Preference number: 5 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTLTHLA*VHVPWT
Trigger: AGTCCACGGAACATGTACCAATGCCAGATGGGTAAG...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATTGGAAAGCCCATAGTTaGCTTACCCATCTGGCATTG +
Preference number: 5 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHWKAHS*LTHLAL
Trigger: CAATGCCAGATGGGTAAGCAAACTATGGGCTTTCCA...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGTCATTACTGCACACTTaGATGTTATCCACAACACAA +
Preference number: 5 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARSLLHT*MLSTTQ
Trigger: TTGTGTTGTGGATAACATCAAAGTGTGCAGTAATGA...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TTTGCTCCTATAAACGGCAATCCATCGTCATCTAACTTCTGCAGAACGCGTGGGTCATTACTGCACACTTaGATGTTATCCACAACACAA +
Preference number: 5 (lower is better)
Translates to: FAPINGNPSSSNFCRTRGSLLHT*MLSTTQ
Trigger: TTGTGTTGTGGATAACATCAAAGTGTGCAGTAATGA...CCCACGCGTTCTGCAGAAGTTAGATGACGATGGATTGCCGTTTATAGGAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CAA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGGAAAACCATGGGGATaGAACAGAATGTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTGKPWG*NRMSGT
Trigger: GGTCCCAGACATTCTGTTCAATCCCCATGGTTTTCC...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTAGGAAAACCATGGGGATaGAACAGAATGTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVGKPWG*NRMSGT
Trigger: GGTCCCAGACATTCTGTTCAATCCCCATGGTTTTCC...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCAGGTTGGAAAGGAGACTaGTCACCGTATGCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSGWKGD*SPYALP
Trigger: TGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACC...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTATTACCCAGGCTGTCCTaGAACTCCTGCACTCAAATG +
Preference number: 5 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVLPRLS*NSCTQM
Trigger: CATTTGAGTGCAGGAGTTCAAGGACAGCCTGGGTAA...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATACCCATGTTGCCCAGATaGGACTTGAATTCCTGGGTT +
Preference number: 5 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIPMLPR*DLNSWV
Trigger: AACCCAGGAATTCAAGTCCAATCTGGGCAACATGGG...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CAA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACATGGGGTTTCCCCATGTaGCCCAGATTGGACTTGAAT +
Preference number: 5 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTWGFPM*PRLDLN
Trigger: ATTCAAGTCCAATCTGGGCAACATGGGGAAACCCCA...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CAA 90 bp TGTAATAGTCAAACTCATAGAAACAGGGTAGAAGGGTGGTTGCTAGGGGCCAGGCACTTACAGATTTATTaGTTCTTTTTCCACTCCCAC +
Preference number: 5 (lower is better)
Translates to: CNSQTHRNRVEGWLLGARHLQIY*FFFHSH
Trigger: GTGGGAGTGGAAAAAGAACAAATAAATCTGTAAGTG...CCTGGCCCCTAGCAACCACCCTTCTACCCTGTTTCTATGAGTTTGACTATTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CAA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGGTTTCCGCAGCCTCTTaGGCTCTCATTGGCTCAGTC +
Preference number: 5 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWVSAAS*ALIGSV
Trigger: GACTGAGCCAATGAGAGCCAAAGAGGCTGCGGAAAC...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541869.5
CDS-3UTR CAA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACACCATTCACTGCCCAGTaGATATCAGCTGTCAACTTC +
Preference number: 5 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTPFTAQ*ISAVNF
Trigger: GAAGTTGACAGCTGATATCAACTGGGCAGTGAATGG...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR CAA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATCGTAAGTTGCAAAGCTaGGATTTCACCATGATGGGA +
Preference number: 5 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHRKLQS*DFTMMG
Trigger: TCCCATCATGGTGAAATCCAAGCTTTGCAACTTACG...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR CAA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTCGTAAGTTGCAAAGCTaGGATTTCACCATGATGGGA +
Preference number: 5 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTRKLQS*DFTMMG
Trigger: TCCCATCATGGTGAAATCCAAGCTTTGCAACTTACG...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR CAA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGGGAAGGTTACGTAAGTaGCAAAGCTTGGATTTCACC +
Preference number: 5 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWGRLRK*QSLDFT
Trigger: GGTGAAATCCAAGCTTTGCAACTTACGTAACCTTCC...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR CAA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGCCCTCACACAGTGCATaGAAACTCCATACTGAGTAT +
Preference number: 5 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWPSHSA*KLHTEY
Trigger: ATACTCAGTATGGAGTTTCAATGCACTGTGTGAGGG...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR CAA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACGTTAAGGACCTGTTTTaGTGTCGAACAACCCTCTTC +
Preference number: 5 (lower is better)
Translates to: EIQKPCILGFQVLVESSNVKDLF*CRTTLF
Trigger: GAAGAGGGTTGTTCGACACAAAAACAGGTCCTTAAC...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGGTTAAGGACCTGTTTTaGTGTCGAACAACCCTCTTC +
Preference number: 5 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWVKDLF*CRTTLF
Trigger: GAAGAGGGTTGTTCGACACAAAAACAGGTCCTTAAC...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCCCGCAGCTTGCTCATTaGGGTACCAGTCAGGAACAT +
Preference number: 5 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFPQLAH*GTSQEH
Trigger: ATGTTCCTGACTGGTACCCAAATGAGCAAGCTGCGG...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTTCCATGCACTCTCCTTaGGCTAAAGCAAAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTSMHSP*AKAKSF
Trigger: AAAGCTCTTTGCTTTAGCCAAAGGAGAGTGCATGGA...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACCGTATGAAGTTCAGCTaGTCAGCCACAACACAAAGT +
Preference number: 5 (lower is better)
Translates to: EIQKPCILGFQVLVESSNRMKFS*SATTQS
Trigger: ACTTTGTGTTGTGGCTGACAAGCTGAACTTCATACG...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTAATCCTGGGTACAGACTaGGTTTTCCTGTCATGGGTA +
Preference number: 5 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVILGTD*VFLSWV
Trigger: TACCCATGACAGGAAAACCAAGTCTGTACCCAGGAT...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAATCCTGGGTACAGACTaGGTTTTCCTGTCATGGGTA +
Preference number: 5 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTILGTD*VFLSWV
Trigger: TACCCATGACAGGAAAACCAAGTCTGTACCCAGGAT...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATCCAATTAGCTCTTCTTaGCCCAATGCTAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHPISSS*PNAKFC
Trigger: GCAGAACTTAGCATTGGGCAAAGAAGAGCTAATTGG...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCATGGAAAGCCCATAGTTaGCTTACCCATCTGGCATTG +
Preference number: 5 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSWKAHS*LTHLAL
Trigger: CAATGCCAGATGGGTAAGCAAACTATGGGCTTTCCA...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACATGGAAAGCCCATAGTTaGCTTACCCATCTGGCATTG +
Preference number: 5 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTWKAHS*LTHLAL
Trigger: CAATGCCAGATGGGTAAGCAAACTATGGGCTTTCCA...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGGTGATGCAAACACACTaGAATTTTCCACTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWVMQTH*NFPLPV
Trigger: CACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCAC...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTCAGTTGTATTTTCTGTaGCGCATGGCAGACCAAGAA +
Preference number: 5 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTQLYFL*RMADQE
Trigger: TTCTTGGTCTGCCATGCGCAACAGAAAATACAACTG...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GTGTCGAACAACCCTCTTCCATTACAATCCTTAACATCTGAGAAACAGAGTTCCCTACACAGAGTACAGTaGTATTTTCTGTTGCGCATG +
Preference number: 5 (lower is better)
Translates to: VSNNPLPLQSLTSEKQSSLHRVQ*YFLLRM
Trigger: CATGCGCAACAGAAAATACAACTGTACTCTGTGTAG...GGAACTCTGTTTCTCAGATGTTAAGGATTGTAATGGAAGAGGGTTGTTCGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACGTTTTCAGGTCTTGGTaGAGAGTTCTAACACCGTTG +
Preference number: 5 (lower is better)
Translates to: EIQKPCILGFQVLVESSNVFRSW*RVLTPL
Trigger: CAACGGTGTTAGAACTCTCAACCAAGACCTGAAAAC...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGGTTTTCAGGTCTTGGTaGAGAGTTCTAACACCGTTG +
Preference number: 5 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWVFRSW*RVLTPL
Trigger: CAACGGTGTTAGAACTCTCAACCAAGACCTGAAAAC...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGGTCTAAAGATCTGTaGTACAACATGGTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: EIQKPCILGFQVLVESSNRSKDL*YNMVPG
Trigger: TCCAGGCACCATGTTGTACAACAGATCTTTAGACCT...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGAGGTCTAAAGATCTGTaGTACAACATGGTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWRSKDL*YNMVPG
Trigger: TCCAGGCACCATGTTGTACAACAGATCTTTAGACCT...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAAGGTGGGTGGATCACTaGAGGTCAGGGTCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSRWVDH*RSGSSR
Trigger: TCTTGAAGACCCTGACCTCAAGTGATCCACCCACCT...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTACGCACCCAGCCAGTTTaGCTTTATGCAGTTTCAGTT +
Preference number: 5 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVRTQPV*LYAVSV
Trigger: AACTGAAACTGCATAAAGCAAAACTGGCTGGGTGCG...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CAA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCACCCAGTCTTGAACACTaGTCCCAGGGAAATGAAACT +
Preference number: 5 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSPSLEH*SQGNET
Trigger: AGTTTCATTTCCCTGGGACAAGTGTTCAAGACTGGG...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CAA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCCCAGCAATCCCAGTCTaGAACACTTGTCCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFPAIPV*NTCPRE
Trigger: TTCCCTGGGACAAGTGTTCAAGACTGGGATTGCTGG...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CAA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACACCTCTTTGGCTCTCATaGGCTCAGTCAATTAGGATC +
Preference number: 5 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTPLWLS*AQSIRI
Trigger: GATCCTAATTGACTGAGCCAATGAGAGCCAAAGAGG...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCACCTCTTTGGCTCTCATaGGCTCAGTCAATTAGGATC +
Preference number: 5 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSPLWLS*AQSIRI
Trigger: GATCCTAATTGACTGAGCCAATGAGAGCCAAAGAGG...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AATGGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGCCGGAAGGTTACGTAAGTaGCAAAGCTTGGATTTCACC +
Preference number: 5 (lower is better)
Translates to: NGKISPRHNQHSDDFFNAGRLRK*QSLDFT
Trigger: GGTGAAATCCAAGCTTTGCAACTTACGTAACCTTCC...GGCATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000424062.1
CDS-3UTR CAA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACACCCTCACACAGTGCATaGAAACTCCATACTGAGTAT +
Preference number: 5 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTPSHSA*KLHTEY
Trigger: ATACTCAGTATGGAGTTTCAATGCACTGTGTGAGGG...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR CAA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAGTTAAGGACCTGTTTTaGTGTCGAACAACCCTCTTC +
Preference number: 5 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIVKDLF*CRTTLF
Trigger: GAAGAGGGTTGTTCGACACAAAAACAGGTCCTTAAC...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGACCTGTTTTTGTGTCGAACAACCCTCTTCCATTACAATCCTTAACATCTGAGTACCAGTCAGGAACATaGAGTTTTACTCTGAAGCAT +
Preference number: 5 (lower is better)
Translates to: GPVFVSNNPLPLQSLTSEYQSGT*SFTLKH
Trigger: ATGCTTCAGAGTAAAACTCAATGTTCCTGACTGGTA...CTCAGATGTTAAGGATTGTAATGGAAGAGGGTTGTTCGACACAAAAACAGGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000430293.1
CDS-3UTR CAA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTATCCATGCACTCTCCTTaGGCTAAAGCAAAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVSMHSP*AKAKSF
Trigger: AAAGCTCTTTGCTTTAGCCAAAGGAGAGTGCATGGA...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGGGAGTGACCCCCAAGTaGCACAGTAAAGCTGGAATA +
Preference number: 5 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWGVTPK*HSKAGI
Trigger: TATTCCAGCTTTACTGTGCAACTTGGGGGTCACTCC...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCGGAGTGACCCCCAAGTaGCACAGTAAAGCTGGAATA +
Preference number: 5 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFGVTPK*HSKAGI
Trigger: TATTCCAGCTTTACTGTGCAACTTGGGGGTCACTCC...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAGAGAAAGGGATGAAGTaGGCAATCACACTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSEKGMK*AITLSR
Trigger: CCTGCTGAGTGTGATTGCCAACTTCATCCCTTTCTC...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGCCATTGATCTTACCCATCTGGCATaGGTACATGTTCCGTGGACT +
Preference number: 5 (lower is better)
Translates to: KISPRHNQHSDDFFNAIDLTHLA*VHVPWT
Trigger: AGTCCACGGAACATGTACCAATGCCAGATGGGTAAG...ATCAATGGCATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGCTTACCCATCTGGCATaGGTACATGTTCCGTGGACT +
Preference number: 5 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWLTHLA*VHVPWT
Trigger: AGTCCACGGAACATGTACCAATGCCAGATGGGTAAG...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTGGCATTGGTCCCAATaGGATAGTTATCCATGTCAT +
Preference number: 5 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWWHWSQ*DSYPCH
Trigger: ATGACATGGATAACTATCCAATTGGGACCAATGCCA...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAATGCCATTGTGATGCAAACACACTaGAATTTTCCACTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: GKISPRHNQHSDDFFNAIVMQTH*NFPLPV
Trigger: CACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCAC...AATGGCATTGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGTGATGCAAACACACTaGAATTTTCCACTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTVMQTH*NFPLPV
Trigger: CACTGGGAGTGGAAAATTCAAGTGTGTTTGCATCAC...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp ATACGCTCATCTTTGAAAGCAAATTCAAAGGGAGGTATAGCCTGTAATCCCAATTGTCTCGGGCTCCAGTaGTCCTTACTTGAAATTTGT +
Preference number: 5 (lower is better)
Translates to: IRSSLKANSKGGIACNPNCLGLQ*SLLEIC
Trigger: ACAAATTTCAAGTAAGGACAACTGGAGCCCGAGACA...ATTGGGATTACAGGCTATACCTCCCTTTGAATTTGCTTTCAAAGATGAGCGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCACAGTTGTATTTTCTGTaGCGCATGGCAGACCAAGAA +
Preference number: 5 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSQLYFL*RMADQE
Trigger: TTCTTGGTCTGCCATGCGCAACAGAAAATACAACTG...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGCTACACAGAGTACAGTaGTATTTTCTGTTGCGCATG +
Preference number: 5 (lower is better)
Translates to: VNLPERFRNLAYLVFRSWLHRVQ*YFLLRM
Trigger: CATGCGCAACAGAAAATACAACTGTACTCTGTGTAG...CCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATCTACACAGAGTACAGTaGTATTTTCTGTTGCGCATG +
Preference number: 5 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHLHRVQ*YFLLRM
Trigger: CATGCGCAACAGAAAATACAACTGTACTCTGTGTAG...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAGTTTTCAGGTCTTGGTaGAGAGTTCTAACACCGTTG +
Preference number: 5 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTVFRSW*RVLTPL
Trigger: CAACGGTGTTAGAACTCTCAACCAAGACCTGAAAAC...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCGGTTGGAAAGGAGACTaGTCACCGTATGCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFGWKGD*SPYALP
Trigger: TGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACC...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAGGTTGGAAAGGAGACTaGTCACCGTATGCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSGWKGD*SPYALP
Trigger: TGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACC...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGACCTGTTTTTGTGTCGAACAACCCTCTTCCATTACAATCCTTAACATCTGAGAAACACTGTACCTGTTaGTTTTTACTTCAACGTGGC +
Preference number: 5 (lower is better)
Translates to: GPVFVSNNPLPLQSLTSEKHCTC*FLLQRG
Trigger: GCCACGTTGAAGTAAAAACAAACAGGTACAGTGTTT...CTCAGATGTTAAGGATTGTAATGGAAGAGGGTTGTTCGACACAAAAACAGGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAAGGTCTAAAGATCTGTaGTACAACATGGTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIRSKDL*YNMVPG
Trigger: TCCAGGCACCATGTTGTACAACAGATCTTTAGACCT...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCATTACCCAGGCTGTCCTaGAACTCCTGCACTCAAATG +
Preference number: 5 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSLPRLS*NSCTQM
Trigger: CATTTGAGTGCAGGAGTTCAAGGACAGCCTGGGTAA...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACGAGATACGCTCATCTTaGAAAGCAAATTCAAAGGGA +
Preference number: 5 (lower is better)
Translates to: EIQKPCILGFQVLVESSNEIRSS*KANSKG
Trigger: TCCCTTTGAATTTGCTTTCAAAGATGAGCGTATCTC...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR CAA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCACCATTCACTGCCCAGTaGATATCAGCTGTCAACTTC +
Preference number: 5 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSPFTAQ*ISAVNF
Trigger: GAAGTTGACAGCTGATATCAACTGGGCAGTGAATGG...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000541869.5
CDS-3UTR CAA 90 bp CTCCCAGTGTCATTACTGCACACTTTGATGTTATCCACAACACAATTTTCTTTAGGAAGGTTACGTAAGTaGCAAAGCTTGGATTTCACC +
Preference number: 5 (lower is better)
Translates to: LPVSLLHTLMLSTTQFSLGRLRK*QSLDFT
Trigger: GGTGAAATCCAAGCTTTGCAACTTACGTAACCTTCC...TAAAGAAAATTGTGTTGTGGATAACATCAAAGTGTGCAGTAATGACACTGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACCTCTGGTTTTCCATTTaGGTCTTATCATTGCAATGG +
Preference number: 5 (lower is better)
Translates to: EIQKPCILGFQVLVESSNLWFSI*VLSLQW
Trigger: CCATTGCAATGATAAGACCAAAATGGAAAACCAGAG...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR CAA 90 bp ATTTGTATAGTACTGTCCTGCTCAAGATGGATTAACAGGTGTGTGACACTCACTTACCAGTCAGGAACATaGAGTTTTACTCTGAAGCAT +
Preference number: 5 (lower is better)
Translates to: ICIVLSCSRWINRCVTLTYQSGT*SFTLKH
Trigger: ATGCTTCAGAGTAAAACTCAATGTTCCTGACTGGTA...AGTGAGTGTCACACACCTGTTAATCCATCTTGAGCAGGACAGTACTATACAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACTACCAGTCAGGAACATaGAGTTTTACTCTGAAGCAT +
Preference number: 5 (lower is better)
Translates to: EIQKPCILGFQVLVESSNYQSGT*SFTLKH
Trigger: ATGCTTCAGAGTAAAACTCAATGTTCCTGACTGGTA...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTATTATACCTGATTGTTTGGAAAGCCCATAGTTaGCTTACCCATCTGGCATTG +
Preference number: 5 (lower is better)
Translates to: ESWDIIFKDKGGLLYLIVWKAHS*LTHLAL
Trigger: CAATGCCAGATGGGTAAGCAAACTATGGGCTTTCCA...AACAATCAGGTATAATAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CAA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCATGGAAAGCCCATAGTTaGCTTACCCATCTGGCATTG +
Preference number: 5 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSWKAHS*LTHLAL
Trigger: CAATGCCAGATGGGTAAGCAAACTATGGGCTTTCCA...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCTGGAAAGCCCATAGTTaGCTTACCCATCTGGCATTG +
Preference number: 5 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFWKAHS*LTHLAL
Trigger: CAATGCCAGATGGGTAAGCAAACTATGGGCTTTCCA...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTAGTTATCCGATCGGTCTaGATAAGTGAGAAGTGGAAA +
Preference number: 5 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVVIRSV*ISEKWK
Trigger: TTTCCACTTCTCACTTATCAAGACCGATCGGATAAC...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TTACTTGAAATTTGTCTGAGACCATATGGCGTAAGCGCTGATAATAAACCACTCTGGCATTGGTCCCAATaGGATAGTTATCCATGTCAT +
Preference number: 5 (lower is better)
Translates to: LLEICLRPYGVSADNKPLWHWSQ*DSYPCH
Trigger: ATGACATGGATAACTATCCAATTGGGACCAATGCCA...GAGTGGTTTATTATCAGCGCTTACGCCATATGGTCTCAGACAAATTTCAAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CAA 90 bp CTCCCAGTGTCATTACTGCACACTTTGATGTTATCCACAACACAATTTTCTTTATGTCTCGGGCTCCAGTaGTCCTTACTTGAAATTTGT +
Preference number: 5 (lower is better)
Translates to: LPVSLLHTLMLSTTQFSLCLGLQ*SLLEIC
Trigger: ACAAATTTCAAGTAAGGACAACTGGAGCCCGAGACA...TAAAGAAAATTGTGTTGTGGATAACATCAAAGTGTGCAGTAATGACACTGGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333990.10
ENST00000448770.5
CDS-3UTR CAA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCACTACACAGAGTACAGTaGTATTTTCTGTTGCGCATG +
Preference number: 5 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSLHRVQ*YFLLRM
Trigger: CATGCGCAACAGAAAATACAACTGTACTCTGTGTAG...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTACTACACAGAGTACAGTaGTATTTTCTGTTGCGCATG +
Preference number: 5 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVLHRVQ*YFLLRM
Trigger: CATGCGCAACAGAAAATACAACTGTACTCTGTGTAG...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAAGAAACCTTGCATACTaGGTTTTCAGGTCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIRNLAY*VFRSWL
Trigger: CAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCT...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AAACTTGTGGAGATGACAGGTATGTTTATTACCCTGATTGTGGTGATGGTATCAAGAAACCTTGCATACTaGGTTTTCAGGTCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: KLVEMTGMFITLIVVMVSRNLAY*VFRSWL
Trigger: CAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCT...TGATACCATCACCACAATCAGGGTAATAAACATACCTGTCATCTCCACAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263331.10
ENST00000409894.7
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAAACACTGTACCTGTTaGTTTTTACTTCAACGTGGC +
Preference number: 5 (lower is better)
Translates to: GVGKETCHRMLFHLSIFHKHCTC*FLLQRG
Trigger: GCCACGTTGAAGTAAAAACAAACAGGTACAGTGTTT...ATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACAAACACTGTACCTGTTaGTTTTTACTTCAACGTGGC +
Preference number: 5 (lower is better)
Translates to: EIQKPCILGFQVLVESSNKHCTC*FLLQRG
Trigger: GCCACGTTGAAGTAAAAACAAACAGGTACAGTGTTT...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCTTGCCCAGATTGGACTaGAATTCCTGGGTTCAAGCA +
Preference number: 5 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFLPRLD*NSWVQA
Trigger: TGCTTGAACCCAGGAATTCAAGTCCAATCTGGGCAA...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CAA 90 bp ATTGTGGTGATGGTATCAAAGGTGTGTGCATATAGTCAGACCCATCAAATTGTACACTCACTGGGAGTCTaGGGATATAATCTTCAAAGA +
Preference number: 5 (lower is better)
Translates to: IVVMVSKVCAYSQTHQIVHSLGV*GYNLQR
Trigger: TCTTTGAAGATTATATCCCAAGACTCCCAGTGAGTG...TACAATTTGATGGGTCTGACTATATGCACACACCTTTGATACCATCACCACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CAA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCCGTAAGTTGCAAAGCTaGGATTTCACCATGATGGGA +
Preference number: 5 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFRKLQS*DFTMMG
Trigger: TCCCATCATGGTGAAATCCAAGCTTTGCAACTTACG...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR CAA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCGGAAGGTTACGTAAGTaGCAAAGCTTGGATTTCACC +
Preference number: 5 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFGRLRK*QSLDFT
Trigger: GGTGAAATCCAAGCTTTGCAACTTACGTAACCTTCC...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR CAA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGGTTAAGGACCTGTTTTaGTGTCGAACAACCCTCTTC +
Preference number: 5 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWVKDLF*CRTTLF
Trigger: GAAGAGGGTTGTTCGACACAAAAACAGGTCCTTAAC...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCATCCATGCACTCTCCTTaGGCTAAAGCAAAGAGCTTT +
Preference number: 5 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSSMHSP*AKAKSF
Trigger: AAAGCTCTTTGCTTTAGCCAAAGGAGAGTGCATGGA...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGCGTATGAAGTTCAGCTaGTCAGCCACAACACAAAGT +
Preference number: 5 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWRMKFS*SATTQS
Trigger: ACTTTGTGTTGTGGCTGACAAGCTGAACTTCATACG...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCCGTATGAAGTTCAGCTaGTCAGCCACAACACAAAGT +
Preference number: 5 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFRMKFS*SATTQS
Trigger: ACTTTGTGTTGTGGCTGACAAGCTGAACTTCATACG...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGCCAATTAGCTCTTCTTaGCCCAATGCTAAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWPISSS*PNAKFC
Trigger: GCAGAACTTAGCATTGGGCAAAGAAGAGCTAATTGG...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GAGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACTCATTACTGCACACTTaGATGTTATCCACAACACAA +
Preference number: 5 (lower is better)
Translates to: EIQKPCILGFQVLVESSNSLLHT*MLSTTQ
Trigger: TTGTGTTGTGGATAACATCAAAGTGTGCAGTAATGA...GTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTATTATACCTGATTGTTTGTCTCGGGCTCCAGTaGTCCTTACTTGAAATTTGT +
Preference number: 5 (lower is better)
Translates to: ESWDIIFKDKGGLLYLIVCLGLQ*SLLEIC
Trigger: ACAAATTTCAAGTAAGGACAACTGGAGCCCGAGACA...AACAATCAGGTATAATAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CAA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCATGTCTCGGGCTCCAGTaGTCCTTACTTGAAATTTGT +
Preference number: 5 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSCLGLQ*SLLEIC
Trigger: ACAAATTTCAAGTAAGGACAACTGGAGCCCGAGACA...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCACAGTTGTATTTTCTGTaGCGCATGGCAGACCAAGAA +
Preference number: 5 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSQLYFL*RMADQE
Trigger: TTCTTGGTCTGCCATGCGCAACAGAAAATACAACTG...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGCAGTTGTATTTTCTGTaGCGCATGGCAGACCAAGAA +
Preference number: 5 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWQLYFL*RMADQE
Trigger: TTCTTGGTCTGCCATGCGCAACAGAAAATACAACTG...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCGTTTTCAGGTCTTGGTaGAGAGTTCTAACACCGTTG +
Preference number: 5 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFVFRSW*RVLTPL
Trigger: CAACGGTGTTAGAACTCTCAACCAAGACCTGAAAAC...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GGGTTGGAAAGGAGACTTGTCACCGTATGCTCTTCCATTTATCAATATTTCATAAAACACTGTACCTGTTaGTTTTTACTTCAACGTGGC +
Preference number: 5 (lower is better)
Translates to: GLERRLVTVCSSIYQYFIKHCTC*FLLQRG
Trigger: GCCACGTTGAAGTAAAAACAAACAGGTACAGTGTTT...TATGAAATATTGATAAATGGAAGAGCATACGGTGACAAGTCTCCTTTCCAACCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS TCA 90 bp GAGATACGCTCATCTTTGAAAGCAAATTCAAAGGGAGGTATAGCCTaGAATGCAATTCACACTATTAAATTGCTTGCATTTCCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: EIRSSLKANSKGGIA*NAIHTIKLLAFPRH
Trigger: ATGCCTTGGAAATGCAAGCAATTTAATAGTGTGAATTGCATTTCAGGCTATACCTCCCTTTGAATTTGCTTTCAAAGATGAGCGTATCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468475.1
CDS-3UTR CAA 90 bp ATTGCAATGGGAAAATTTCTCCGAGGCATAATCAACATTCGGATGACTTTTTCAGAGATACGCTCATCTTaGAAAGCAAATTCAAAGGGA +
Preference number: 5 (lower is better)
Translates to: IAMGKFLRGIINIRMTFSEIRSS*KANSKG
Trigger: TCCCTTTGAATTTGCTTTCAAAGATGAGCGTATCTC...TGAAAAAGTCATCCGAATGTTGATTATGCCTCGGAGAAATTTTCCCATTGCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS-3UTR CAA 90 bp GAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTATTATACCTGATTGTTGTTATCCGATCGGTCTaGATAAGTGAGAAGTGGAAA +
Preference number: 5 (lower is better)
Translates to: ESWDIIFKDKGGLLYLIVVIRSV*ISEKWK
Trigger: TTTCCACTTCTCACTTATCAAGACCGATCGGATAAC...AACAATCAGGTATAATAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CAA 90 bp AGAGTTCTAACACCGTTGAAAAATCTCAAGAGTAACCTGGTAATGATATCTTCAGTTATCCGATCGGTCTaGATAAGTGAGAAGTGGAAA +
Preference number: 5 (lower is better)
Translates to: RVLTPLKNLKSNLVMISSVIRSV*ISEKWK
Trigger: TTTCCACTTCTCACTTATCAAGACCGATCGGATAAC...TGAAGATATCATTACCAGGTTACTCTTGAGATTTTTCAACGGTGTTAGAACTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCGTTATCCGATCGGTCTaGATAAGTGAGAAGTGGAAA +
Preference number: 5 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFVIRSV*ISEKWK
Trigger: TTTCCACTTCTCACTTATCAAGACCGATCGGATAAC...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTATTATACCTGATTGTTTGGCATTGGTCCCAATaGGATAGTTATCCATGTCAT +
Preference number: 5 (lower is better)
Translates to: ESWDIIFKDKGGLLYLIVWHWSQ*DSYPCH
Trigger: ATGACATGGATAACTATCCAATTGGGACCAATGCCA...AACAATCAGGTATAATAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CAA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGTGGCATTGGTCCCAATaGGATAGTTATCCATGTCAT +
Preference number: 5 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWWHWSQ*DSYPCH
Trigger: ATGACATGGATAACTATCCAATTGGGACCAATGCCA...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AGATTCAGAAACCTTGCATACTTGGTTTTCAGGTCTTGGTTGAGAGTTCTAACATCATTACTGCACACTTaGATGTTATCCACAACACAA +
Preference number: 5 (lower is better)
Translates to: RFRNLAYLVFRSWLRVLTSLLHT*MLSTTQ
Trigger: TTGTGTTGTGGATAACATCAAAGTGTGCAGTAATGA...TGTTAGAACTCTCAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCTGAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCAGAAACCTTGCATACTaGGTTTTCAGGTCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFRNLAY*VFRSWL
Trigger: CAACCAAGACCTGAAAACCAAGTATGCAAGGTTTCT...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp GAGTCTTGGGATATAATCTTCAAAGATAAAGGGGGACTATTATACCTGATTGTTCAGCTTGCATTCTATTaGTATAGTACTGTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: ESWDIIFKDKGGLLYLIVQLAFY*YSTVLL
Trigger: GAGCAGGACAGTACTATACAAATAGAATGCAAGCTG...AACAATCAGGTATAATAGTCCCCCTTTATCTTTGAAGATTATATCCCAAGACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263331.10
CDS-3UTR CAA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGCAGCTTGCATTCTATTaGTATAGTACTGTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWQLAFY*YSTVLL
Trigger: GAGCAGGACAGTACTATACAAATAGAATGCAAGCTG...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCCAGCTTGCATTCTATTaGTATAGTACTGTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFQLAFY*YSTVLL
Trigger: GAGCAGGACAGTACTATACAAATAGAATGCAAGCTG...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS-3UTR CAA 90 bp AAATTACATTACAGCTTGCATTCTATTTGTATAGTACTGTCCTGCTCAAGATGGCTCTGGTTTTCCATTTaGGTCTTATCATTGCAATGG +
Preference number: 5 (lower is better)
Translates to: KLHYSLHSICIVLSCSRWLWFSI*VLSLQW
Trigger: CCATTGCAATGATAAGACCAAAATGGAAAACCAGAG...CCATCTTGAGCAGGACAGTACTATACAAATAGAATGCAAGCTGTAATGTAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000541869.5
CDS-3UTR CAA 90 bp TTGTCAATAGTTAATCTACCAGAGAGATTCAGAAACCTTGCATACTTGGTTTTCTACCAGTCAGGAACATaGAGTTTTACTCTGAAGCAT +
Preference number: 5 (lower is better)
Translates to: LSIVNLPERFRNLAYLVFYQSGT*SFTLKH
Trigger: ATGCTTCAGAGTAAAACTCAATGTTCCTGACTGGTA...GAAAACCAAGTATGCAAGGTTTCTGAATCTCTCTGGTAGATTAACTATTGACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000537335.5
ENST00000541869.5
CDS TCA 72 bp GCACCGCGAGGCCGAGACCCTCGTGCACAGCGTAGTTaGAGGACTCCACGTGCGCCCGCGTCAGCTCCTGCA +
Preference number: 6 (lower is better)
Translates to: APRGRDPRAQRS*RTPRAPASAPA
Trigger: TGCAGGAGCTGACGCGGGCGCACGTGGAGTCCTTCAACTACGCTGTGCACGAGGGTCTCGGCCTCGCGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000424062.1
ENST00000430293.1
ENST00000430769.1
ENST00000438748.5
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS TCA 72 bp CAGTCCCGTTTCCGCAGCCTGTTCCCAGTCCCACGCTaGTGCCGACCCTGGGGAGTCATCCGGCCAAAGTCG +
Preference number: 6 (lower is better)
Translates to: QSRFRSLFPVPR*CRPWGVIRPKS
Trigger: CGACTTTGGCCGGATGACTCCCCAGGGTCGGCATCAGCGTGGGACTGGGAACAGGCTGCGGAAACGGGACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438748.5
CDS CCA 72 bp CCCACTCATCTCCCCGCTCGCGAAAGATGCCGCAGGTaGAAACCCGCTCCCCGCCCAGTTGAGCATGTGACC +
Preference number: 6 (lower is better)
Translates to: PTHLPARERCRR*KPAPRPVEHVT
Trigger: GGTCACATGCTCAACTGGGCGGGGAGCGGGTTTCCACCTGCGGCATCTTTCGCGAGCGGGGAGATGAGTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537335.5
CDS GCA 72 bp GGACTCCACGTGCGCCCGCGTCAGCTCCTGCAACGCTaGCTTTTGCTGTTCCCGCGGGATTCCATAAGAGGG +
Preference number: 6 (lower is better)
Translates to: GLHVRPRQLLQR*LLLFPRDSIRG
Trigger: CCCTCTTATGGAATCCCGCGGGAACAGCAAAAGGCAGCGTTGCAGGAGCTGACGCGGGCGCACGTGGAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000424062.1
ENST00000430293.1
ENST00000430769.1
ENST00000438748.5
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS CCA 72 bp CTCTCTACCCAACTCCTAACTCGCGAGGCTCACCCCTaGGAAGCCAAGGAGTGGTCGGGCCCCGCTAACCTC +
Preference number: 6 (lower is better)
Translates to: LSTQLLTREAHP*EAKEWSGPANL
Trigger: GAGGTTAGCGGGGCCCGACCACTCCTTGGCTTCCCAGGGGTGAGCCTCGCGAGTTAGGAGTTGGGTAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537335.5
CDS CAA 72 bp CACGTGCGCCCGCGTCAGCTCCTGCAACGCTGCCTTTaGCTGTTCCCGCGGGATTCCATAAGAGGGGTCAGT +
Preference number: 6 (lower is better)
Translates to: HVRPRQLLQRCL*LFPRDSIRGVS
Trigger: ACTGACCCCTCTTATGGAATCCCGCGGGAACAGCAAAAGGCAGCGTTGCAGGAGCTGACGCGGGCGCACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000424062.1
ENST00000430293.1
ENST00000430769.1
ENST00000438748.5
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS CAA 90 bp GAAGGACTCCACGTGCGCCCGCGTCAGCTCCTGCAACGCTGCCTTTaGCTGTTCCCGCGGGATTCCATAAGAGGGGTCAGTCAAGTGCTT +
Preference number: 6 (lower is better)
Translates to: EGLHVRPRQLLQRCL*LFPRDSIRGVSQVL
Trigger: AAGCACTTGACTGACCCCTCTTATGGAATCCCGCGGGAACAGCAAAAGGCAGCGTTGCAGGAGCTGACGCGGGCGCACGTGGAGTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000263331.10
ENST00000333990.10
ENST00000409894.7
ENST00000417433.6
ENST00000424062.1
ENST00000430293.1
ENST00000430769.1
ENST00000438748.5
ENST00000448770.5
ENST00000537335.5
ENST00000541869.5
CDS TCA 72 bp TTGCTTCAACGAAAAAGCGGATGCCGGGCCCCGGGCTaGCTCTCTACCCAACTCCTAACTCGCGAGGCTCAC +
Preference number: 6 (lower is better)
Translates to: LLQRKSGCRAPG*LSTQLLTREAH
Trigger: GTGAGCCTCGCGAGTTAGGAGTTGGGTAGAGAGTCAGCCCGGGGCCCGGCATCCGCTTTTTCGTTGAAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537335.5
CDS TCA 72 bp TCTTCTGTTTCCCTTCACCTGTTCCCAGTCCCACGCTaGTGCCGACCCTGGGGAGTCATCCGGCCAAAGTCG +
Preference number: 6 (lower is better)
Translates to: SSVSLHLFPVPR*CRPWGVIRPKS
Trigger: CGACTTTGGCCGGATGACTCCCCAGGGTCGGCATCAGCGTGGGACTGGGAACAGGTGAAGGGAAACAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537335.5
CDS CAA 72 bp GCCGCAGTCCCGTTTCCGCAGCCTCTTTGGCTCTCATaGGCTCAGTCAATTAGGATCGGAGGAGAGCGGTCT +
Preference number: 6 (lower is better)
Translates to: AAVPFPQPLWLS*AQSIRIGGERS
Trigger: AGACCGCTCTCCTCCGATCCTAATTGACTGAGCCAATGAGAGCCAAAGAGGCTGCGGAAACGGGACTGCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430769.1
ENST00000541869.5
CDS TCA 72 bp GTTTCTCGGGGTCAACGTAGAACCAAAAACGTCGAGTaGACGGGCCGATTAAGGCCGTGTCCAGCCAGAGCG +
Preference number: 6 (lower is better)
Translates to: VSRGQRRTKNVE*TGRLRPCPARA
Trigger: CGCTCTGGCTGGACACGGCCTTAATCGGCCCGTTCACTCGACGTTTTTGGTTCTACGTTGACCCCGAGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333990.10
ENST00000409894.7
ENST00000537335.5
CDS CCA 72 bp CCGCAGTCCCGTTTCCGCAGCCTCTTTGGCTCTCATTaGCTCAGTCAATTAGGATCGGAGGAGAGCGGTCTT +
Preference number: 6 (lower is better)
Translates to: PQSRFRSLFGSH*LSQLGSEESGL
Trigger: AAGACCGCTCTCCTCCGATCCTAATTGACTGAGCCAATGAGAGCCAAAGAGGCTGCGGAAACGGGACTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430769.1
ENST00000541869.5
CDS CCA 72 bp TGGATAAACATTGGCCTCTTTGCAGATGGTCCCTTTTaGAACTGTAGGTGGACTGCACCGCGAGGCCGAGAC +
Preference number: 6 (lower is better)
Translates to: WINIGLFADGPF*NCRWTAPRGRD
Trigger: GTCTCGGCCTCGCGGTGCAGTCCACCTACAGTTCCAAAAGGGACCATCTGCAAAGAGGCCAATGTTTATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424062.1
CDS TCA 72 bp TCCCAATATTTGGGAGACCGAGAGAGGAGGACTACTTaGGCTCAGGAGTTTGAGACCAGGCTGGGCCACATA +
Preference number: 6 (lower is better)
Translates to: SQYLGDRERRTT*AQEFETRLGHI
Trigger: TATGTGGCCCAGCCTGGTCTCAAACTCCTGAGCTCAAGTAGTCCTCCTCTCTCGGTCTCCCAAATATTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333990.10
CDS CAA 90 bp GGTCTCACCAAGGGACTCTGTTCCATAGTTCCAATTAGCTCTTCTTaGCCCAATGCTAAGTTCTGCACAGGCCGTACCAGTCTACAAGGA +
Preference number: 6 (lower is better)
Translates to: GLTKGLCSIVPISSS*PNAKFCTGRTSLQG
Trigger: TCCTTGTAGACTGGTACGGCCTGTGCAGAACTTAGCATTGGGCAAAGAAGAGCTAATTGGAACTATGGAACAGAGTCCCTTGGTGAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458012.2
CDS CAA 72 bp AAGGGACTCTGTTCCATAGTTCCAATTAGCTCTTCTTaGCCCAATGCTAAGTTCTGCACAGGCCGTACCAGT +
Preference number: 6 (lower is better)
Translates to: KGLCSIVPISSS*PNAKFCTGRTS
Trigger: ACTGGTACGGCCTGTGCAGAACTTAGCATTGGGCAAAGAAGAGCTAATTGGAACTATGGAACAGAGTCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458012.2