RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POLR1A (Homo sapiens)

Ensembl gene IDs: ENSG00000068654

Ensembl transcript IDs: ENST00000263857.11, ENST00000409024.3, ENST00000409681.1, ENST00000424089.5, ENST00000462078.1, ENST00000471427.1, ENST00000483538.1, ENST00000486964.5, ENST00000492034.1, ENST00000496892.5, ENST00000683266.1, ENST00000683470.1, ENST00000684026.1, ENST00000684177.1, ENST00000684556.1

Found 1248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTTGTCACATGGGAGGCTACAGGCCCGGGGCTGGCTTGGCTCCCGTaGAAACACTGCAGCGGGCAGCCAGTCCGGAAGGCAGCATCTGGC +
Preference number: 1 (lower is better)
Translates to: FVTWEATGPGLAWLP*KHCSGQPVRKAASG
Trigger: GCCAGATGCTGCCTTCCGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCTGTAGCCTCCCATGTGACAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR GCA 90 bp GAGCAGCCGGAAGGAGCAGGCCTTGGGCAGCAGGCTCCACGTTCCTaGTCATCGGGAGCCCCCAGGAATCTTGTCTGTTGTCCCTGGCCA +
Preference number: 1 (lower is better)
Translates to: EQPEGAGLGQQAPRS*SSGAPRNLVCCPWP
Trigger: TGGCCAGGGACAACAGACAAGATTCCTGGGGGCTCCCGATGAGCAGGAACGTGGAGCCTGCTGCCCAAGGCCTGCTCCTTCCGGCTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR CCA 90 bp TGGTCTAGAAGGACACCTCGCCACACAGTGGCAGGGCCAGGACCCTaGCCAGGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTG +
Preference number: 1 (lower is better)
Translates to: WSRRTPRHTVAGPGP*PGREVGWVEDYATL
Trigger: CAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCCTGGCCAGGGTCCTGGCCCTGCCACTGTGTGGCGAGGTGTCCTTCTAGACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR GCA 90 bp GATGGTCACAGCCCTGCCAATATGCAGGGCTTGCTCCTTCGCCTCTaGGCCCTCAGTGCCTGGGAGAGATGGAATCCACGGACCCTGTGC +
Preference number: 1 (lower is better)
Translates to: DGHSPANMQGLLLRL*ALSAWERWNPRTLC
Trigger: GCACAGGGTCCGTGGATTCCATCTCTCCCAGGCACTGAGGGCGCAGAGGCGAAGGAGCAAGCCCTGCATATTGGCAGGGCTGTGACCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR GCA 90 bp GGTCGGGGGTCTGATCTAAGTGCGATGGTCACAGCCCTGCCAATATaGAGGGCTTGCTCCTTCGCCTCTGCGCCCTCAGTGCCTGGGAGA +
Preference number: 1 (lower is better)
Translates to: GRGSDLSAMVTALPI*RACSFASAPSVPGR
Trigger: TCTCCCAGGCACTGAGGGCGCAGAGGCGAAGGAGCAAGCCCTGCATATTGGCAGGGCTGTGACCATCGCACTTAGATCAGACCCCCGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 90 bp TCCCTCCTTCTGCCCCTGCTGGACAAATGGCCTCGCTTGCTGTGCTaGGCTGGCAGAGCTGCAGGCCTCCAGGTTTCTGCTGGAAGCATC +
Preference number: 1 (lower is better)
Translates to: SLLLPLLDKWPRLLC*AGRAAGLQVSAGSI
Trigger: GATGCTTCCAGCAGAAACCTGGAGGCCTGCAGCTCTGCCAGCCCAGCACAGCAAGCGAGGCCATTTGTCCAGCAGGGGCAGAAGGAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 90 bp GTGGTGTCTGAAACTTTGTCACATGGGAGGCTACAGGCCCGGGGCTaGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGGA +
Preference number: 1 (lower is better)
Translates to: VVSETLSHGRLQARG*LGSRENTAAGSQSG
Trigger: TCCGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCTGTAGCCTCCCATGTGACAAAGTTTCAGACACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 90 bp AGGAAACGTGGACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTaGAGGCCTGTGTTCCTTCCCATAAGCAGGGCCTGTGGGGTGTAT +
Preference number: 1 (lower is better)
Translates to: RKRGRPRTGRHSPLG*RPVFLPISRACGVY
Trigger: ATACACCCCACAGGCCCTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGTCCACGTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR TCA 90 bp TGGGGCAGGAGGGCATCCCTCACATCCCAACACAGGTCGGGGGTCTaGTCTAAGTGCGATGGTCACAGCCCTGCCAATATGCAGGGCTTG +
Preference number: 1 (lower is better)
Translates to: WGRRASLTSQHRSGV*SKCDGHSPANMQGL
Trigger: CAAGCCCTGCATATTGGCAGGGCTGTGACCATCGCACTTAGATCAGACCCCCGACCTGTGTTGGGATGTGAGGGATGCCCTCCTGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR GCA 90 bp GCCCAGCTCAGAGGCCCACTGCTTTCAGGCCCAAGGTCGCTGCTGTaGTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGTCTCCTG +
Preference number: 1 (lower is better)
Translates to: AQLRGPLLSGPRSLL*SVLSLGTALDSSLL
Trigger: CAGGAGACTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAGTGGGCCTCTGAGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR GCA 90 bp AGCTGGCCCAGCTCAGAGGCCCACTGCTTTCAGGCCCAAGGTCGCTaGTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGTC +
Preference number: 1 (lower is better)
Translates to: SWPSSEAHCFQAQGR*CALYCHLELPWIPV
Trigger: GACTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAGTGGGCCTCTGAGCTGGGCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR CCA 90 bp GCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTaGATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGC +
Preference number: 1 (lower is better)
Translates to: AQGRCCALYCHLELP*IPVSWSSHAEGRLG
Trigger: GCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR CCA 90 bp AGTCCCAGTTACTTGGAAGGCTGCGGTGGGAGGGTTGCTTGGTCCTaGGACTTCGAGGCTGCTGTGAGCCGTGATTGCAACCCTGCACTC +
Preference number: 1 (lower is better)
Translates to: SPSYLEGCGGRVAWS*DFEAAVSRDCNPAL
Trigger: GAGTGCAGGGTTGCAATCACGGCTCACAGCAGCCTCGAAGTCCCAGGACCAAGCAACCCTCCCACCGCAGCCTTCCAAGTAACTGGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 90 bp GCCTGTAGTCCCAGTTACTTGGAAGGCTGCGGTGGGAGGGTTGCTTaGTCCTGGGACTTCGAGGCTGCTGTGAGCCGTGATTGCAACCCT +
Preference number: 1 (lower is better)
Translates to: ACSPSYLEGCGGRVA*SWDFEAAVSRDCNP
Trigger: AGGGTTGCAATCACGGCTCACAGCAGCCTCGAAGTCCCAGGACCAAGCAACCCTCCCACCGCAGCCTTCCAAGTAACTGGGACTACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 90 bp GCAGCCAGTCCGGAAGGCAGCATCTGGCAGGGCCTCCAGGCCTTCTaGGTAAGGAAGACCCCAGCTTGCAAAAGACATAGAGGCAGCACT +
Preference number: 1 (lower is better)
Translates to: AASPEGSIWQGLQAF*VRKTPACKRHRGST
Trigger: AGTGCTGCCTCTATGTCTTTTGCAAGCTGGGGTCTTCCTTACTCAGAAGGCCTGGAGGCCCTGCCAGATGCTGCCTTCCGGACTGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 90 bp TGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGTCTCCTaGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAG +
Preference number: 1 (lower is better)
Translates to: CALYCHLELPWIPVS*SSHAEGRLGHALTK
Trigger: CTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR CCA 90 bp GCAGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTaGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACT +
Preference number: 1 (lower is better)
Translates to: AEKSQATCSIAPAVT*VLCVGVNCCGPGAT
Trigger: AGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR TCA 90 bp TGTGCCCATGCCTTGGTGAACCTGGCAGACCCCGTTAGGAGGTACTaGTTTCTGTCAGGCTTTCCCCAGTGTAGGCCTAGGAGGTGCAGG +
Preference number: 1 (lower is better)
Translates to: CAHALVNLADPVRRY*FLSGFPQCRPRRCR
Trigger: CCTGCACCTCCTAGGCCTACACTGGGGAAAGCCTGACAGAAATCAGTACCTCCTAACGGGGTCTGCCAGGTTCACCAAGGCATGGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 90 bp GGGAAGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTaGAACTTTGTCACATGGGAGGCTACAGGCCCGGGGCTGGCTTGG +
Preference number: 1 (lower is better)
Translates to: GKASVYCGPAEDCGV*NFVTWEATGPGLAW
Trigger: CCAAGCCAGCCCCGGGCCTGTAGCCTCCCATGTGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR GCA 90 bp TTCAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTaGCCTGGATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGCAGGC +
Preference number: 1 (lower is better)
Translates to: FRPKVAAVLCTVTWN*PGFQSPGPLMQKAG
Trigger: GCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR GCA 90 bp TCTGATCTAAGTGCGATGGTCACAGCCCTGCCAATATGCAGGGCTTaGTCCTTCGCCTCTGCGCCCTCAGTGCCTGGGAGAGATGGAATC +
Preference number: 1 (lower is better)
Translates to: SDLSAMVTALPICRA*SFASAPSVPGRDGI
Trigger: GATTCCATCTCTCCCAGGCACTGAGGGCGCAGAGGCGAAGGAGCAAGCCCTGCATATTGGCAGGGCTGTGACCATCGCACTTAGATCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 90 bp GGGGGAGGGAATGGTGAGGATGGGCATGGTCAGGTATCTGTCGGCTaGGACAAACCTCCCAGGCCATTGAGTCCAACTTGCGCGAAGATA +
Preference number: 1 (lower is better)
Translates to: GGGNGEDGHGQVSVG*DKPPRPLSPTCAKI
Trigger: TATCTTCGCGCAAGTTGGACTCAATGGCCTGGGAGGTTTGTCCCAGCCGACAGATACCTGACCATGCCCATCCTCACCATTCCCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 90 bp AGTGGAGATCAAGGTTGGATGGATGCAGCATGGGGGAGGGAATGGTaGGGATGGGCATGGTCAGGTATCTGTCGGCTGGGACAAACCTCC +
Preference number: 1 (lower is better)
Translates to: SGDQGWMDAAWGREW*GWAWSGICRLGQTS
Trigger: GGAGGTTTGTCCCAGCCGACAGATACCTGACCATGCCCATCCTCACCATTCCCTCCCCCATGCTGCATCCATCCAACCTTGATCTCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR GCA 90 bp TCGCTTGCTGTGCTGGGCTGGCAGAGCTGCAGGCCTCCAGGTTTCTaGTGGAAGCATCATCCCTTTCTTCTTTCAGGCTTTGTTGAGCCC +
Preference number: 1 (lower is better)
Translates to: SLAVLGWQSCRPPGF*WKHHPFLLSGFVEP
Trigger: GGGCTCAACAAAGCCTGAAAGAAGAAAGGGATGATGCTTCCAGCAGAAACCTGGAGGCCTGCAGCTCTGCCAGCCCAGCACAGCAAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 90 bp GGCAGGCTGTGGTACGGGGCTGCCCCACTGAGCCATCTGCAGAGGTaGTATCACTCAACGATGAAAGACTCAACGAACCAGCCTTTAACG +
Preference number: 1 (lower is better)
Translates to: GRLWYGAAPLSHLQR*YHSTMKDSTNQPLT
Trigger: CGTTAAAGGCTGGTTCGTTGAGTCTTTCATCGTTGAGTGATACCACCTCTGCAGATGGCTCAGTGGGGCAGCCCCGTACCACAGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 90 bp CTTGCTGTGCTGGGCTGGCAGAGCTGCAGGCCTCCAGGTTTCTGCTaGAAGCATCATCCCTTTCTTCTTTCAGGCTTTGTTGAGCCCCAG +
Preference number: 1 (lower is better)
Translates to: LAVLGWQSCRPPGFC*KHHPFLLSGFVEPQ
Trigger: CTGGGGCTCAACAAAGCCTGAAAGAAGAAAGGGATGATGCTTCCAGCAGAAACCTGGAGGCCTGCAGCTCTGCCAGCCCAGCACAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 90 bp TCAACCCAGGCAGTTACCCAGGTACCCTGCCGGGTAACTCAGAGTTaGGTTAAACCCTGCTCCTTGATGACCACTCGTGGTAGGACAGCG +
Preference number: 1 (lower is better)
Translates to: STQAVTQVPCRVTQS*VKPCSLMTTRGRTA
Trigger: CGCTGTCCTACCACGAGTGGTCATCAAGGAGCAGGGTTTAACTCAACTCTGAGTTACCCGGCAGGGTACCTGGGTAACTGCCTGGGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 90 bp CAACTCTGTGACCTATCTAAACTACACAACCTCAAGGGCAGGCTGTaGTACGGGGCTGCCCCACTGAGCCATCTGCAGAGGTGGTATCAC +
Preference number: 1 (lower is better)
Translates to: QLCDLSKLHNLKGRL*YGAAPLSHLQRWYH
Trigger: GTGATACCACCTCTGCAGATGGCTCAGTGGGGCAGCCCCGTACCACAGCCTGCCCTTGAGGTTGTGTAGTTTAGATAGGTCACAGAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 90 bp CAGGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTaGCTCAGGGAAGAAGTCTTGATGGGGACTCTTTGTGGACTCTGC +
Preference number: 1 (lower is better)
Translates to: QAERLGGWRTMLRCT*LREEVLMGTLCGLC
Trigger: GCAGAGTCCACAAAGAGTCCCCATCAAGACTTCTTCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR GCA 90 bp GGATCGCCCGGTCTTGCAGTGGGGACAGCGCTTAGCATTCATATGTaGCTTCCAGAAGAGAGCAATGAGCTTGCTCTTGCTCTCACACAC +
Preference number: 1 (lower is better)
Translates to: GSPGLAVGTALSIHM*LPEESNELALALTH
Trigger: GTGTGTGAGAGCAAGAGCAAGCTCATTGCTCTCTTCTGGAAGGCACATATGAATGCTAAGCGCTGTCCCCACTGCAAGACCGGGCGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409024.3
3UTR GCA 90 bp TCCTCAATTCCCAGGGGCTCAGAGTCCTTCTGGCCAGCTGTCCTGTaGACCATGGCTGGAAACGTGATAGTCAACTTGCTGTTGTGTTCC +
Preference number: 1 (lower is better)
Translates to: SSIPRGSESFWPAVL*TMAGNVIVNLLLCS
Trigger: GGAACACAACAGCAAGTTGACTATCACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCAGAAGGACTCTGAGCCCCTGGGAATTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
3UTR CCA 90 bp ATCAGGAAAGACACAGGAATAAAACAGAGCTGCCCAGGAACCATGTaGATGGGTGGGGCAGGAGGGCATCCCTCACATCCCAACACAGGT +
Preference number: 1 (lower is better)
Translates to: IRKDTGIKQSCPGTM*MGGAGGHPSHPNTG
Trigger: ACCTGTGTTGGGATGTGAGGGATGCCCTCCTGCCCCACCCATCCACATGGTTCCTGGGCAGCTCTGTTTTATTCCTGTGTCTTTCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 90 bp CAAACCTCCCAGGCCATTGAGTCCAACTTGCGCGAAGATAGTCACTaGGGAGCTGCAGTGACACCTGAGCCTGTGAATAAACCAGGTCCT +
Preference number: 1 (lower is better)
Translates to: QTSQAIESNLREDSH*GAAVTPEPVNKPGP
Trigger: AGGACCTGGTTTATTCACAGGCTCAGGTGTCACTGCAGCTCCCCAGTGACTATCTTCGCGCAAGTTGGACTCAATGGCCTGGGAGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 90 bp CAGGGGCTCAGAGTCCTTCTGGCCAGCTGTCCTGTGCACCATGGCTaGAAACGTGATAGTCAACTTGCTGTTGTGTTCCTTTCGGACAAC +
Preference number: 1 (lower is better)
Translates to: QGLRVLLASCPVHHG*KRDSQLAVVFLSDN
Trigger: GTTGTCCGAAAGGAACACAACAGCAAGTTGACTATCACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCAGAAGGACTCTGAGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
3UTR TCA 90 bp CTGCCTGCCTCAAAACTGTCATATTCCTCTGTGCCCATGCCTTGGTaGACCTGGCAGACCCCGTTAGGAGGTACTGATTTCTGTCAGGCT +
Preference number: 1 (lower is better)
Translates to: LPASKLSYSSVPMPW*TWQTPLGGTDFCQA
Trigger: AGCCTGACAGAAATCAGTACCTCCTAACGGGGTCTGCCAGGTTCACCAAGGCATGGGCACAGAGGAATATGACAGTTTTGAGGCAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR GCA 90 bp CATCCTCAATGGGCACTTACAGTCCTAAGAAGACTCCAAAGCCTCTaGCATCTTAAGCTGCCAAGGCCACTCTCAGAGGCTTCCGAGCAT +
Preference number: 1 (lower is better)
Translates to: HPQWALTVLRRLQSL*HLKLPRPLSEASEH
Trigger: ATGCTCGGAAGCCTCTGAGAGTGGCCTTGGCAGCTTAAGATGGCAGAGGCTTTGGAGTCTTCTTAGGACTGTAAGTGCCCATTGAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 90 bp TTGGACCCCACTGTAAAGTCCTTGCAGACATCTGTCATGGCACGATaGCAGCTTTACTGCACGTGCACTCACTTGAGGGCAGAGATCAGA +
Preference number: 1 (lower is better)
Translates to: LDPTVKSLQTSVMAR*QLYCTCTHLRAEIR
Trigger: TCTGATCTCTGCCCTCAAGTGAGTGCACGTGCAGTAAAGCTGTCATCGTGCCATGACAGATGTCTGCAAGGACTTTACAGTGGGGTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 90 bp ATCATCCCTTTCTTCTTTCAGGCTTTGTTGAGCCCCAGGTGGAGCTaGTGGTGGCATCCTTTGGACCCCACTGTAAAGTCCTTGCAGACA +
Preference number: 1 (lower is better)
Translates to: IIPFFFQALLSPRWS*WWHPLDPTVKSLQT
Trigger: TGTCTGCAAGGACTTTACAGTGGGGTCCAAAGGATGCCACCATCAGCTCCACCTGGGGCTCAACAAAGCCTGAAAGAAGAAAGGGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 90 bp CAAGAATCATGGGTTGGGGAAGGCAAGTGTTTACTGTGGTCCAGCTaGGGACTGTGGTGTCTGAAACTTTGTCACATGGGAGGCTACAGG +
Preference number: 1 (lower is better)
Translates to: QESWVGEGKCLLWSS*GLWCLKLCHMGGYR
Trigger: CCTGTAGCCTCCCATGTGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCTTCCCCAACCCATGATTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 90 bp GCACGTGGAACATCAGGTTCATGTTTCCAAGCAAGAATCATGGGTTaGGGAAGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTG +
Preference number: 1 (lower is better)
Translates to: ARGTSGSCFQARIMG*GRQVFTVVQLRTVV
Trigger: CACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCTTCCCCAACCCATGATTCTTGCTTGGAAACATGAACCTGATGTTCCACGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 90 bp TTCCTAACTCTCCCCAGGTGCAGAACACTTAAGGGTCCCAACATCTaGTTGAAACACAGCCCACACCAAACCACGAGATGGCACCTCATA +
Preference number: 1 (lower is better)
Translates to: FLTLPRCRTLKGPNI*LKHSPHQTTRWHLI
Trigger: TATGAGGTGCCATCTCGTGGTTTGGTGTGGGCTGTGTTTCAATCAGATGTTGGGACCCTTAAGTGTTCTGCACCTGGGGAGAGTTAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 90 bp CAGATCTTAAGATCCTACTGCAGAAACCTAGGGCCAGTGACTCCTTaGGATGTCATCGTACCGATAGGTGGTGACGGTGGCTGTGCATTT +
Preference number: 1 (lower is better)
Translates to: QILRSYCRNLGPVTP*DVIVPIGGDGGCAF
Trigger: AAATGCACAGCCACCGTCACCACCTATCGGTACGATGACATCTCAAGGAGTCACTGGCCCTAGGTTTCTGCAGTAGGATCTTAAGATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR GCA 90 bp TTAACTCAAAGAATGAATGTCTTACCCTGCAGGCTGGGCCCTTCCTaGCTGCCTCAAAACTGTCATATTCCTCTGTGCCCATGCCTTGGT +
Preference number: 1 (lower is better)
Translates to: LTQRMNVLPCRLGPS*LPQNCHIPLCPCLG
Trigger: ACCAAGGCATGGGCACAGAGGAATATGACAGTTTTGAGGCAGGCAGGAAGGGCCCAGCCTGCAGGGTAAGACATTCATTCTTTGAGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR GCA 90 bp TGGCCTGGCCTCAGATATCTGTATATCCATGTTCACAGCGTTATTTaGAACAGCCAAGAGGTGGAGGCAACCCAAGTGTCCACCAACAGA +
Preference number: 1 (lower is better)
Translates to: WPGLRYLYIHVHSVI*NSQEVEATQVSTNR
Trigger: TCTGTTGGTGGACACTTGGGTTGCCTCCACCTCTTGGCTGTTGCAAATAACGCTGTGAACATGGATATACAGATATCTGAGGCCAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 90 bp GGAAGAGGGACCCAAGACCTGACTGTGCCAAGAAAATCCCCGCCCTaGGTTCTCAAATCCAAATGCAGAAACTGCAAACCAAGGGAAAAA +
Preference number: 1 (lower is better)
Translates to: GRGTQDLTVPRKSPP*VLKSKCRNCKPREK
Trigger: TTTTTCCCTTGGTTTGCAGTTTCTGCATTTGGATTTGAGAACCCAGGGCGGGGATTTTCTTGGCACAGTCAGGTCTTGGGTCCCTCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 90 bp CTCGGCCTCCCAACGTATTGGGATTACAGGTGTGAACGCCTGGCCTaGCCTCAGATATCTGTATATCCATGTTCACAGCGTTATTTGCAA +
Preference number: 1 (lower is better)
Translates to: LGLPTYWDYRCERLA*PQISVYPCSQRYLQ
Trigger: TTGCAAATAACGCTGTGAACATGGATATACAGATATCTGAGGCCAGGCCAGGCGTTCACACCTGTAATCCCAATACGTTGGGAGGCCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 90 bp CTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTTaGTTGGCTGAACGCACGTGGAACATCAGGTTCATGTTTCCAAGC +
Preference number: 1 (lower is better)
Translates to: LAQNAASLLNHILEV*LAERTWNIRFMFPS
Trigger: GCTTGGAAACATGAACCTGATGTTCCACGTGCGTTCAGCCAATCAAACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR GCA 90 bp TTGGTGGTTGTAATTGAAGTAAAACTGCACCAGGGTCAGGAGACCTaGGGTAGGCCCAGCAACTCTGTGACCTATCTAAACTACACAACC +
Preference number: 1 (lower is better)
Translates to: LVVVIEVKLHQGQET*GRPSNSVTYLNYTT
Trigger: GGTTGTGTAGTTTAGATAGGTCACAGAGTTGCTGGGCCTACCGCAGGTCTCCTGACCCTGGTGCAGTTTTACTTCAATTACAACCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 90 bp ATCCTTCATTCTTCCACAGGGCAGAAAGGTGTTCGCGGGCACTGGTaGGTGTTAAGTATCCTCGTTTTCCTATCTGAGCTTCCTCAATTC +
Preference number: 1 (lower is better)
Translates to: ILHSSTGQKGVRGHW*VLSILVFLSELPQF
Trigger: GAATTGAGGAAGCTCAGATAGGAAAACGAGGATACTTAACACCCACCAGTGCCCGCGAACACCTTTCTGCCCTGTGGAAGAATGAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424089.5
3UTR CCA 90 bp AGAATCCTTCATTCTTCCACAGGGCAGAAAGGTGTTCGCGGGCACTaGTGGGTGTTAAGTATCCTCGTTTTCCTATCTGAGCTTCCTCAA +
Preference number: 1 (lower is better)
Translates to: RILHSSTGQKGVRGH*WVLSILVFLSELPQ
Trigger: TTGAGGAAGCTCAGATAGGAAAACGAGGATACTTAACACCCACCAGTGCCCGCGAACACCTTTCTGCCCTGTGGAAGAATGAAGGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424089.5
3UTR GCA 90 bp AGTCTTATTTCAGAGCTCAGTGTCTTGCCCAAAACGCAGCCTCACTaGTCAATCACATTCTTGAGGTTTGATTGGCTGAACGCACGTGGA +
Preference number: 1 (lower is better)
Translates to: SLISELSVLPKTQPH*SITFLRFDWLNARG
Trigger: TCCACGTGCGTTCAGCCAATCAAACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGCTCTGAAATAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 90 bp CCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTTGATTaGCTGAACGCACGTGGAACATCAGGTTCATGTTTCCAAGCAAGA +
Preference number: 1 (lower is better)
Translates to: PKTQPHCSITFLRFD*LNARGTSGSCFQAR
Trigger: TCTTGCTTGGAAACATGAACCTGATGTTCCACGTGCGTTCAGCCAATCAAACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR GCA 90 bp GTTTTACAAAGCCTTTGTATAAGTCCTCTCTGTCTTTTCTGTCCATaGCAGGGAAATGTATTGCTGGTGCTAGAGGGAGAGGAAACGTGG +
Preference number: 1 (lower is better)
Translates to: VLQSLCISPLCLFCP*QGNVLLVLEGEETW
Trigger: CCACGTTTCCTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCATGGACAGAAAAGACAGAGAGGACTTATACAAAGGCTTTGTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR TCA 90 bp GAAACTGAAGTGCATTTCTTAGGGTCCCACTGTAAGTTGAGGGCTTaGGATTCCAAGAAAAGTCTTATTTCAGAGCTCAGTGTCTTGCCC +
Preference number: 1 (lower is better)
Translates to: ETEVHFLGSHCKLRA*DSKKSLISELSVLP
Trigger: GGGCAAGACACTGAGCTCTGAAATAAGACTTTTCTTGGAATCTCAAGCCCTCAACTTACAGTGGGACCCTAAGAAATGCACTTCAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 90 bp AGATTTGACTTGGGCCTACTTTCCAAAACTCAAATGCATCCTCAATaGGCACTTACAGTCCTAAGAAGACTCCAAAGCCTCTGCCATCTT +
Preference number: 1 (lower is better)
Translates to: RFDLGLLSKTQMHPQ*ALTVLRRLQSLCHL
Trigger: AAGATGGCAGAGGCTTTGGAGTCTTCTTAGGACTGTAAGTGCCCATTGAGGATGCATTTGAGTTTTGGAAAGTAGGCCCAAGTCAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR GCA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGCCCTCCTTCTGCCCCTaGTGGACAAATGGCCTCGCT +
Preference number: 2 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPPSFCP*WTNGLA
Trigger: AGCGAGGCCATTTGTCCAGCAGGGGCAGAAGGAGGG...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR TCA 90 bp GGGAGAGGAAACGTGGACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGACTCCTGCAGCACAGGTaGGGCCCCAGCCATCTCAGG +
Preference number: 2 (lower is better)
Translates to: GRGNVDGQEQGGTVLWAGLLQHR*GPSHLR
Trigger: CCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGAG...TCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGTCCACGTTTCCTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR GCA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGCAGGCCCAAGGTCGCTaGTGTGCTCTGTACTGTCAC +
Preference number: 2 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPQAQGR*CALYCH
Trigger: GTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR GCA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCGTGGGAGTGAACTGCTaGGGCCCTGGAGCGACTGCT +
Preference number: 2 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSVGVNC*GPGATA
Trigger: AGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCAC...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR TCA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGGCACGTGCACTCACTTaGGGGCAGAGATCAGATCTT +
Preference number: 2 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPARALT*GQRSDL
Trigger: AAGATCTGATCTCTGCCCTCAAGTGAGTGCACGTGC...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR GCA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGTCCCTACTCTGGAGGTaGCTGGGGTCCCCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQSLLWR*LGSPAA
Trigger: TGCTGCTGGGGACCCCAGGCACCTCCAGAGTAGGGA...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR GCA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCTGTGTGGGAGTGAACTaGTGCGGCCCTGGAGCGACT +
Preference number: 2 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSCVGVN*CGPGAT
Trigger: AGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACA...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CCA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGGGAAGGAGCAGGCCTTaGGCAGCAGGCTCCACGTTC +
Preference number: 2 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQGRSRP*AAGSTF
Trigger: GAACGTGGAGCCTGCTGCCCAAGGCCTGCTCCTTCC...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR CAA 90 bp TGTCTGAAACTTTGTCACATGGGAGGCTACAGGCCCGGGGCTGGCTaGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGGAAGGC +
Preference number: 2 (lower is better)
Translates to: CLKLCHMGGYRPGAG*APVKTLQRAASPEG
Trigger: GCCTTCCGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCTGTAGCCTCCCATGTGACAAAGTTTCAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR TCA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGAAGGGTCCCAACATCTaGTTGAAACACAGCCCACAC +
Preference number: 2 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPKGPNI*LKHSPH
Trigger: GTGTGGGCTGTGTTTCAATCAGATGTTGGGACCCTT...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR GCA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGCTCCTGGTCCTCTCATaGAGAAGGCAGGCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQLLVLS*RRQAGP
Trigger: TGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAG...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR GCA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGCCATTGAGTCCAACTTaGGCGAAGATAGTCACTGGG +
Preference number: 2 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPPLSPT*AKIVTG
Trigger: CCCAGTGACTATCTTCGCGCAAGTTGGACTCAATGG...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CCA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGATGCAGAAGGCAGGCTaGGCCACGCCCTCACCAAGG +
Preference number: 2 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQMQKAG*ATPSPR
Trigger: CCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCAT...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CCA 90 bp CCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGTCTGCCCCCAGGGGCTaGAGCAGCCGGAAGGAGCAG +
Preference number: 2 (lower is better)
Translates to: PVGCMGQNIGLHTKLTAESAPRG*SSRKEQ
Trigger: CTGCTCCTTCCGGCTGCTCCAGCCCCTGGGGGCAGA...CTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CCA 90 bp GGGAGAGGAAACGTGGACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCAGAGAGGTTGGGTaGGTGGAGGACTATGCTACG +
Preference number: 2 (lower is better)
Translates to: GRGNVDGQEQGGTVLWAGGREVG*VEDYAT
Trigger: CGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC...TCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGTCCACGTTTCCTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CCA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGCTCACCAAGGGTCCTTaGAGCTGGGCAGATGGTGCC +
Preference number: 2 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQLTKGP*SWADGA
Trigger: GGCACCATCTGCCCAGCTCCAAGGACCCTTGGTGAG...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CCA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCGAGAGGTTGGGTGGGTaGAGGACTATGCTACGCTGT +
Preference number: 2 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSERLGG*RTMLRC
Trigger: ACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTC...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR TCA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCCTGTCACTTTCCAGGTaGAGCTGGCCCAGCTCAGAG +
Preference number: 2 (lower is better)
Translates to: LSLATHSKRTPLPYSGGALSLSR*SWPSSE
Trigger: CTCTGAGCTGGGCCAGCTTCACCTGGAAAGTGACAG...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR TCA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGAGGGAGGGGCAAGGATaGGCAACTCTGTCACTTTCC +
Preference number: 2 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQREGQG*ATLSLS
Trigger: GGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCCCT...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR GCA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAAGCTCAGAGGCCCACTaGTTTCAGGCCCAAGGTCGC +
Preference number: 2 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRSSEAH*FQAQGR
Trigger: GCGACCTTGGGCCTGAAAGCAGTGGGCCTCTGAGCT...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR GCA 90 bp AGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGCAGGCTCCACGTTCCTaGTCATCGGGAGCCCCCAGG +
Preference number: 2 (lower is better)
Translates to: REKPGNLFNRPSSDLGSMQAPRS*SSGAPR
Trigger: CCTGGGGGCTCCCGATGAGCAGGAACGTGGAGCCTG...CATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CCA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGAAGGGTCCTTGGAGCTaGGCAGATGGTGCCGGGGTA +
Preference number: 2 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGKGPWS*ADGAGV
Trigger: TACCCCGGCACCATCTGCCCAGCTCCAAGGACCCTT...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CCA 90 bp AGGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAAGGGTCCTTGGAGCTaGGCAGATGGTGCCGGGGTA +
Preference number: 2 (lower is better)
Translates to: RQRGWVGGGLCYAVLDSGKGPWS*ADGAGV
Trigger: TACCCCGGCACCATCTGCCCAGCTCCAAGGACCCTT...CCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CCA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCTCACCAAGGGTCCTTaGAGCTGGGCAGATGGTGCC +
Preference number: 2 (lower is better)
Translates to: QAQGRCCALYCHLELPWILTKGP*SWADGA
Trigger: GGCACCATCTGCCCAGCTCCAAGGACCCTTGGTGAG...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CCA 90 bp CCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGGCCAGGCAGAGAGGTTaGGTGGGTGGAGGACTATGC +
Preference number: 2 (lower is better)
Translates to: PVGCMGQNIGLHTKLTAEARQRG*VGGGLC
Trigger: GCATAGTCCTCCACCCACCCAACCTCTCTGCCTGGC...CTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR CAA 90 bp GGTATCTGTCGGCTGGGACAAACCTCCCAGGCCATTGAGTCCAACTaGCGCGAAGATAGTCACTGGGGAGCTGCAGTGACACCTGAGCCT +
Preference number: 2 (lower is better)
Translates to: GICRLGQTSQAIESN*REDSHWGAAVTPEP
Trigger: AGGCTCAGGTGTCACTGCAGCTCCCCAGTGACTATCTTCGCGCAAGTTGGACTCAATGGCCTGGGAGGTTTGTCCCAGCCGACAGATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CAA 90 bp CAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTGAAACTTaGTCACATGGGAGGCTACAGGCCCGGGGCTGGCTTGGCTCCCGT +
Preference number: 2 (lower is better)
Translates to: QVFTVVQLRTVVSET*SHGRLQARGWLGSR
Trigger: ACGGGAGCCAAGCCAGCCCCGGGCCTGTAGCCTCCCATGTGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR TCA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGATTCTATGTGTGGGAGTaGACTGCTGCGGCCCTGGAG +
Preference number: 2 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRFYVWE*TAAALE
Trigger: CTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAA...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CCA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGGCCTTGGGGCTGATGTaGTCTAGAAGGACACCTCGC +
Preference number: 2 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGALGLM*SRRTPR
Trigger: GCGAGGTGTCCTTCTAGACCACATCAGCCCCAAGGC...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCACTCAAGGGCAGGCTGTaGTACGGGGCTGCCCCACTG +
Preference number: 2 (lower is better)
Translates to: EDGELACLGQKTTSSVRALKGRL*YGAAPL
Trigger: CAGTGGGGCAGCCCCGTACCACAGCCTGCCCTTGAG...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CCA 90 bp GGGCAGAAAGGTGTTCGCGGGCACTGGTGGGTGTTAAGTATCCTCGTTTTCCTACGGTCATGTGCGCCCTaGGACCCCAGGAGGTTGTTC +
Preference number: 2 (lower is better)
Translates to: GQKGVRGHWWVLSILVFLRSCAP*DPRRLF
Trigger: GAACAACCTCCTGGGGTCCCAGGGCGCACATGACCG...TAGGAAAACGAGGATACTTAACACCCACCAGTGCCCGCGAACACCTTTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424089.5
3UTR CAA 90 bp GCTGTCCTGTGCACCATGGCTGGAAACGTGATAGTCAACTTGCTGTaGTGTTCCTTTCGGACAACGGATCGCCCGGTCATGTGCGCCCTG +
Preference number: 2 (lower is better)
Translates to: AVLCTMAGNVIVNLL*CSFRTTDRPVMCAL
Trigger: CAGGGCGCACATGACCGGGCGATCCGTTGTCCGAAAGGAACACAACAGCAAGTTGACTATCACGTTTCCAGCCATGGTGCACAGGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424089.5
3UTR-3UTR GCA 90 bp AGGAATCTTGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTCTCCTGGTCCTCTCATaGAGAAGGCAGGCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: RNLVCCPWPLTAKEPRFPLLVLS*RRQAGP
Trigger: TGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAG...AGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR GCA 90 bp CAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCTGCAGCACAGGTGAGGCCAAGGTCGCTGCTGTaGTCTGTACTGTCACTTGGA +
Preference number: 2 (lower is better)
Translates to: QDFSLGVMPQRPPAAQVRPRSLL*SVLSLG
Trigger: TCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGG...CCTCACCTGTGCTGCAGGAGGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR GCA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCAAGCTCAGAGGCCCACTaGTTTCAGGCCCAAGGTCGC +
Preference number: 2 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQASSEAH*FQAQGR
Trigger: GCGACCTTGGGCCTGAAAGCAGTGGGCCTCTGAGCT...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR GCA 90 bp AAACTACACAACCTCAAGGGCAGGCTGTGGTACGGGGCTGCCCCACTGAGCCATACCACAGTGAGTCCCTaGTCATCAGGATGTGCAAGC +
Preference number: 2 (lower is better)
Translates to: KLHNLKGRLWYGAAPLSHTTVSP*SSGCAS
Trigger: GCTTGCACATCCTGATGAGCAGGGACTCACTGTGGT...ATGGCTCAGTGGGGCAGCCCCGTACCACAGCCTGCCCTTGAGGTTGTGTAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CCA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGCACTTGGAACTGCCCTaGATTCCAGTCTCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRHLELP*IPVSWS
Trigger: GGACCAGGAGACTGGAATCCAGGGCAGTTCCAAGTG...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR CAA 90 bp GCTGTCCTGTGCACCATGGCTGGAAACGTGATAGTCAACTTGCTGTaGTGTTCCTTTCGGACAACGGATCGCCCGGTCTTGCAGTGGGGA +
Preference number: 2 (lower is better)
Translates to: AVLCTMAGNVIVNLL*CSFRTTDRPVLQWG
Trigger: TCCCCACTGCAAGACCGGGCGATCCGTTGTCCGAAAGGAACACAACAGCAAGTTGACTATCACGTTTCCAGCCATGGTGCACAGGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409024.3
3UTR CAA 90 bp TGGCCAGCTGTCCTGTGCACCATGGCTGGAAACGTGATAGTCAACTaGCTGTTGTGTTCCTTTCGGACAACGGATCGCCCGGTCTTGCAG +
Preference number: 2 (lower is better)
Translates to: WPAVLCTMAGNVIVN*LLCSFRTTDRPVLQ
Trigger: CTGCAAGACCGGGCGATCCGTTGTCCGAAAGGAACACAACAGCAAGTTGACTATCACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409024.3
3UTR CAA 90 bp TGGCCAGCTGTCCTGTGCACCATGGCTGGAAACGTGATAGTCAACTaGCTGTTGTGTTCCTTTCGGACAACGGATCGCCCGGTCATGTGC +
Preference number: 2 (lower is better)
Translates to: WPAVLCTMAGNVIVN*LLCSFRTTDRPVMC
Trigger: GCACATGACCGGGCGATCCGTTGTCCGAAAGGAACACAACAGCAAGTTGACTATCACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424089.5
3UTR-3UTR TCA 90 bp AGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTGAAACTTTGTCACTCCTGCAGCACAGGTaGGGCCCCAGCCATCTCAGG +
Preference number: 2 (lower is better)
Translates to: RQVFTVVQLRTVVSETLSLLQHR*GPSHLR
Trigger: CCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGAG...TGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR TCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAATCGCCCCAGCAGTaGCCTGGGTTCTATGTGTGG +
Preference number: 2 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSQSPQQ*PGFYVW
Trigger: CCACACATAGAACCCAGGTCACTGCTGGGGCGATTG...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR GCA 90 bp AAACTACACAACCTCAAGGGCAGGCTGTGGTACGGGGCTGCCCCACTGAGCCATAGACTCCAAAGCCTCTaGCATCTTAAGCTGCCAAGG +
Preference number: 2 (lower is better)
Translates to: KLHNLKGRLWYGAAPLSHRLQSL*HLKLPR
Trigger: CCTTGGCAGCTTAAGATGGCAGAGGCTTTGGAGTCT...ATGGCTCAGTGGGGCAGCCCCGTACCACAGCCTGCCCTTGAGGTTGTGTAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CCA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCCTCTGTACTGTCACTTaGAACTGCCCTGGATTCCAG +
Preference number: 2 (lower is better)
Translates to: LSLATHSKRTPLPYSGGALCTVT*NCPGFQ
Trigger: CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAG...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCACACCACCCAGCACTTTaGGAGGCCACAGTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: EDGELACLGQKTTSSVRAHHPAL*EATVGG
Trigger: TCCTCCCACTGTGGCCTCCCAAAGTGCTGGGTGGTG...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CAA 90 bp CCAGGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTaGACTCAGGGAAGAAGTCTTGATGGGGACTCTTTGTGGACTCTG +
Preference number: 2 (lower is better)
Translates to: PGREVGWVEDYATLY*TQGRSLDGDSLWTL
Trigger: CAGAGTCCACAAAGAGTCCCCATCAAGACTTCTTCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR TCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCACAATCGCCCCAGCAGTaGCCTGGGTTCTATGTGTGG +
Preference number: 2 (lower is better)
Translates to: EDGELACLGQKTTSSVRAQSPQQ*PGFYVW
Trigger: CCACACATAGAACCCAGGTCACTGCTGGGGCGATTG...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR GCA 90 bp CTTTTCTGTCCATGCCAGGGAAATGTATTGCTGGTGCTAGAGGGAGAGGAAACGACTCTTTGTGGACTCTaGCCCCAGGGGCTGGAGCAG +
Preference number: 2 (lower is better)
Translates to: LFCPCQGNVLLVLEGEETTLCGL*PQGLEQ
Trigger: CTGCTCCAGCCCCTGGGGGCAGAGTCCACAAAGAGT...CGTTTCCTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCATGGACAGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR GCA 90 bp CTTTTCTGTCCATGCCAGGGAAATGTATTGCTGGTGCTAGAGGGAGAGGAAACGTGTGTGGGAGTGAACTaGTGCGGCCCTGGAGCGACT +
Preference number: 2 (lower is better)
Translates to: LFCPCQGNVLLVLEGEETCVGVN*CGPGAT
Trigger: AGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACA...CGTTTCCTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCATGGACAGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CCA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGCTCTGTACTGTCACTTaGAACTGCCCTGGATTCCAG +
Preference number: 2 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRLCTVT*NCPGFQ
Trigger: CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAG...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR CAA 90 bp TGGGTCCTATTGCATGGATGTAGGGAGCAACATGGTCACTCTCCCTaGACAAAGCCTCCCTTGATCCCCAACCCTACCCCTAAGGTCACA +
Preference number: 2 (lower is better)
Translates to: WVLLHGCREQHGHSP*TKPPLIPNPTPKVT
Trigger: TGTGACCTTAGGGGTAGGGTTGGGGATCAAGGGAGGCTTTGTCAAGGGAGAGTGACCATGTTGCTCCCTACATCCATGCAATAGGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR TCA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTGAGCAGTCTGGACTCTaGCAGCCCCTGATTCAGGTG +
Preference number: 2 (lower is better)
Translates to: AQCLAQNAASLLNHILEVEQSGL*QPLIQV
Trigger: CACCTGAATCAGGGGCTGTCAGAGTCCAGACTGCTC...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR GCA 90 bp CAGGGGCTCAGAGTCCTTCTGGCCAGCTGTCCTGTGCACCATGGCTGGAAACGTCCCAGGAGGTTGTTCTaGACAATTTCAGTTGTGTAT +
Preference number: 2 (lower is better)
Translates to: QGLRVLLASCPVHHGWKRPRRLF*TISVVY
Trigger: ATACACAACTGAAATTGTGCAGAACAACCTCCTGGG...ACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCAGAAGGACTCTGAGCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
3UTR-3UTR CCA 90 bp AGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGGATTCCAGTCTCCTaGTCCTCTCATGCAGAAGGC +
Preference number: 2 (lower is better)
Translates to: REKPGNLFNRPSSDLGSMWIPVS*SSHAEG
Trigger: GCCTTCTGCATGAGAGGACCAGGAGACTGGAATCCA...CATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CCA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGCCCGCTTCCCTACTCTaGAGGTGCCTGGGGTCCCCA +
Preference number: 2 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGPASLL*RCLGSP
Trigger: TGGGGACCCCAGGCACCTCCAGAGTAGGGAAGCGGG...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CCA 90 bp CTTACAGTCCTAAGAAGACTCCAAAGCCTCTGCCATCTTAAGCTGCCAAGGCCAGCCCCAGCAGTGACCTaGGTTCTATGTGTGGGAGTG +
Preference number: 2 (lower is better)
Translates to: LTVLRRLQSLCHLKLPRPAPAVT*VLCVGV
Trigger: CACTCCCACACATAGAACCCAGGTCACTGCTGGGGC...TGGCCTTGGCAGCTTAAGATGGCAGAGGCTTTGGAGTCTTCTTAGGACTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CCA 90 bp AGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTGAAACTTTGTCAGAGGGAGAGGAAACGTaGACGGCCAAGAACAGGGCG +
Preference number: 2 (lower is better)
Translates to: RQVFTVVQLRTVVSETLSEGEET*TAKNRA
Trigger: CGCCCTGTTCTTGGCCGTCCACGTTTCCTCTCCCTC...TGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCAGGGGTTTTGCCATGTTaGCCAGGGTGGTCTCGAATC +
Preference number: 2 (lower is better)
Translates to: EDGELACLGQKTTSSVRAGVLPC*PGWSRI
Trigger: GATTCGAGACCACCCTGGCCAACATGGCAAAACCCC...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CCA 90 bp CCAGCTGTCCTGTGCACCATGGCTGGAAACGTGATAGTCAACTTGCTGTTGTGTTTTACATGTGCGCCCTaGGACCCCAGGAGGTTGTTC +
Preference number: 2 (lower is better)
Translates to: PAVLCTMAGNVIVNLLLCFTCAP*DPRRLF
Trigger: GAACAACCTCCTGGGGTCCCAGGGCGCACATGTAAA...ACACAACAGCAAGTTGACTATCACGTTTCCAGCCATGGTGCACAGGACAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409024.3
3UTR-3UTR TCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCAGGGAGGGGCAAGGATaGGCAACTCTGTCACTTTCC +
Preference number: 2 (lower is better)
Translates to: FSVNRESGLLLRGYATEAREGQG*ATLSLS
Trigger: GGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCCCT...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR TCA 90 bp AGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTGAAACTTTGTCAGGTGGTCTCGAATCCTaGCCTCAGATGATCTGCCCG +
Preference number: 2 (lower is better)
Translates to: RQVFTVVQLRTVVSETLSGGLES*PQMICP
Trigger: CGGGCAGATCATCTGAGGTCAGGATTCGAGACCACC...TGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR GCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCGTGGGTGGAGGACTATaGTACGCTGTACTTGACTCA +
Preference number: 2 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSVGGGL*YAVLDS
Trigger: TGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCAC...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR GCA 90 bp AGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGGTGGGTGGAGGACTATaGTACGCTGTACTTGACTCA +
Preference number: 2 (lower is better)
Translates to: REKPGNLFNRPSSDLGSMVGGGL*YAVLDS
Trigger: TGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCAC...CATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCATGGATTCCAGTCTCCTaGTCCTCTCATGCAGAAGGC +
Preference number: 2 (lower is better)
Translates to: EDGELACLGQKTTSSVRAWIPVS*SSHAEG
Trigger: GCCTTCTGCATGAGAGGACCAGGAGACTGGAATCCA...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CAA 90 bp CTGGCCTGGCCTCAGATATCTGTATATCCATGTTCACAGCGTTATTaGCAACAGCCAAGAGGTGGAGGCAACCCAAGTGTCCACCAACAG +
Preference number: 2 (lower is better)
Translates to: LAWPQISVYPCSQRY*QQPRGGGNPSVHQQ
Trigger: CTGTTGGTGGACACTTGGGTTGCCTCCACCTCTTGGCTGTTGCAAATAACGCTGTGAACATGGATATACAGATATCTGAGGCCAGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CAA 90 bp CGCACGTGGAACATCAGGTTCATGTTTCCAAGCAAGAATCATGGGTaGGGGAAGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGT +
Preference number: 2 (lower is better)
Translates to: RTWNIRFMFPSKNHG*GKASVYCGPAEDCG
Trigger: ACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCTTCCCCAACCCATGATTCTTGCTTGGAAACATGAACCTGATGTTCCACGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR TCA 90 bp AGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTGAAACTTTGTCAGCCTCCACACCAAACTaGCAGCAGAGAAAAGCCAGG +
Preference number: 2 (lower is better)
Translates to: RQVFTVVQLRTVVSETLSASTPN*QQRKAR
Trigger: CCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGC...TGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR TCA 90 bp CCAGCTGTCCTGTGCACCATGGCTGGAAACGTGATAGTCAACTTGCTGTTGTGTTCCAGAAGAGAGCAATaGGCTTGCTCTTGCTCTCAC +
Preference number: 2 (lower is better)
Translates to: PAVLCTMAGNVIVNLLLCSRREQ*ACSCSH
Trigger: GTGAGAGCAAGAGCAAGCTCATTGCTCTCTTCTGGA...ACACAACAGCAAGTTGACTATCACGTTTCCAGCCATGGTGCACAGGACAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409024.3
3UTR-3UTR TCA 90 bp CTTTTCTGTCCATGCCAGGGAAATGTATTGCTGGTGCTAGAGGGAGAGGAAACGTCAGGGAAGAAGTCTTaGTGGGGACTCTTTGTGGAC +
Preference number: 2 (lower is better)
Translates to: LFCPCQGNVLLVLEGEETSGKKS*WGLFVD
Trigger: GTCCACAAAGAGTCCCCATCAAGACTTCTTCCCTGA...CGTTTCCTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCATGGACAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR TCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCAGACTCTGACAGCCCCTaGTTCAGGTGCAAACTAAAA +
Preference number: 2 (lower is better)
Translates to: EDGELACLGQKTTSSVRADSDSP*FRCKLK
Trigger: TTTTAGTTTGCACCTGAATCAGGGGCTGTCAGAGTC...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCAATTTCAAGAGCAGTCTaGACTCTGACAGCCCCTGAT +
Preference number: 2 (lower is better)
Translates to: EDGELACLGQKTTSSVRAISRAV*TLTAPD
Trigger: ATCAGGGGCTGTCAGAGTCCAGACTGCTCTTGAAAT...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CCA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTGGGTACCTCAACCTTTaGCCTGATCATGAAGACGGT +
Preference number: 2 (lower is better)
Translates to: AQCLAQNAASLLNHILEVGYLNL*PDHEDG
Trigger: ACCGTCTTCATGATCAGGCCAAAGGTTGAGGTACCC...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CAA 90 bp CTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTaGAGGTTTGATTGGCTGAACGCACGTGGAACATCAGGTTCATGT +
Preference number: 2 (lower is better)
Translates to: LSVLPKTQPHCSITF*RFDWLNARGTSGSC
Trigger: ACATGAACCTGATGTTCCACGTGCGTTCAGCCAATCAAACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR GCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCAGTGGTAGGACAGCGATaGTGCTTAAAGAACTTAAGG +
Preference number: 2 (lower is better)
Translates to: EDGELACLGQKTTSSVRAVVGQR*CLKNLR
Trigger: CCTTAAGTTCTTTAAGCAGCATCGCTGTCCTACCAC...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR GCA 90 bp AGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTGAAACTTTGTCAAGGAAGACCCCAGCTTaGAAAAGACATAGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: RQVFTVVQLRTVVSETLSRKTPA*KRHRGS
Trigger: GCTGCCTCTATGTCTTTTGCAAGCTGGGGTCTTCCT...TGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CCA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGCACTTGGAACTGCCCTaGATTCCAGTCTCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGHLELP*IPVSWS
Trigger: GGACCAGGAGACTGGAATCCAGGGCAGTTCCAAGTG...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CCA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGCTTGAACTCGGGAGATaGAGGTTGCAGTGGAGCCGA +
Preference number: 2 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGLELGR*RLQWSR
Trigger: TCGGCTCCACTGCAACCTCCATCTCCCGAGTTCAAG...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CCA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGCCATGTTGGCCAGGGTaGTCTCGAATCCTGACCTCA +
Preference number: 2 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGPCWPG*SRILTS
Trigger: TGAGGTCAGGATTCGAGACCACCCTGGCCAACATGG...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR GCA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGCCAAGGTCGCTGCTGTaGTCTGTACTGTCACTTGGA +
Preference number: 2 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGPRSLL*SVLSLG
Trigger: TCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGG...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR GCA 90 bp GTCTTGCAGTGGGGACAGCGCTTAGCATTCATATGTGCCTTCCAGAAGAGAGCACCCAGGAGGTTGTTCTaGACAATTTCAGTTGTGTAT +
Preference number: 2 (lower is better)
Translates to: VLQWGQRLAFICAFQKRAPRRLF*TISVVY
Trigger: ATACACAACTGAAATTGTGCAGAACAACCTCCTGGG...TGCTCTCTTCTGGAAGGCACATATGAATGCTAAGCGCTGTCCCCACTGCAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409024.3
3UTR-3UTR GCA 90 bp CTTCATTCTTCCACAGGGCAGAAAGGTGTTCGCGGGCACTGGTGGGTGTTAAGTCTTAGCATTCATATGTaGCTTCCAGAAGAGAGCAAT +
Preference number: 2 (lower is better)
Translates to: LHSSTGQKGVRGHWWVLSLSIHM*LPEESN
Trigger: ATTGCTCTCTTCTGGAAGGCACATATGAATGCTAAG...ACTTAACACCCACCAGTGCCCGCGAACACCTTTCTGCCCTGTGGAAGAATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409024.3
3UTR-3UTR CCA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGCTGAGAGCCTCTAAGTaGACTTTGGACGGAAGTGGG +
Preference number: 2 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGLRASK*TLDGSG
Trigger: CCCACTTCCGTCCAAAGTCCACTTAGAGGCTCTCAG...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR TCA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGTCAGGGAAGAAGTCTTaGTGGGGACTCTTTGTGGAC +
Preference number: 2 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGSGKKS*WGLFVD
Trigger: GTCCACAAAGAGTCCCCATCAAGACTTCTTCCCTGA...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CCA 90 bp TTTAAAAACCAGACATGCTGTCTTAATACTCATCCATCAGGAAAGACACAGGAACAGGAACCATGTGGATaGGTGGGGCAGGAGGGCATC +
Preference number: 2 (lower is better)
Translates to: FKNQTCCLNTHPSGKTQEQEPCG*VGQEGI
Trigger: GATGCCCTCCTGCCCCACCCATCCACATGGTTCCTG...TTCCTGTGTCTTTCCTGATGGATGAGTATTAAGACAGCATGTCTGGTTTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR GCA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGCTGAGTCTCTTAAAGTaGTGGGACTGTAAGCGTGAG +
Preference number: 2 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGLSLLK*WDCKRE
Trigger: CTCACGCTTACAGTCCCAGCACTTTAAGAGACTCAG...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR GCA 90 bp TTCATGTTTCCAAGCAAGAATCATGGGTTGGGGAAGGCAAGTGTTTACTGTGGTGGCAATTCTGACACATaGTACAGCATGGATGAACCT +
Preference number: 2 (lower is better)
Translates to: FMFPSKNHGLGKASVYCGGNSDT*YSMDEP
Trigger: AGGTTCATCCATGCTGTAGCATGTGTCAGAATTGCC...ACCACAGTAAACACTTGCCTTCCCCAACCCATGATTCTTGCTTGGAAACATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR GCA 90 bp TTCATGTTTCCAAGCAAGAATCATGGGTTGGGGAAGGCAAGTGTTTACTGTGGTATCTTAAGATCCTACTaGAGAAACCTAGGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: FMFPSKNHGLGKASVYCGILRSY*RNLGPV
Trigger: CACTGGCCCTAGGTTTCTGCAGTAGGATCTTAAGAT...ACCACAGTAAACACTTGCCTTCCCCAACCCATGATTCTTGCTTGGAAACATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CCA 90 bp AAGAACACACTGGGATTGAATCTGGATTCCATACCATCATCATCCATTCCCGAACCTGTGCACCATGGCTaGAAACGTGATAGTCAACTT +
Preference number: 2 (lower is better)
Translates to: KNTLGLNLDSIPSSSIPEPVHHG*KRDSQL
Trigger: AAGTTGACTATCACGTTTCCAGCCATGGTGCACAGG...TTCGGGAATGGATGATGATGGTATGGAATCCAGATTCAATCCCAGTGTGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424089.5
3UTR-3UTR TCA 90 bp AGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTGAAACTTTGTCAATTAGTCCATGTTCTTaGATCCATCCATCAGATTTG +
Preference number: 2 (lower is better)
Translates to: RQVFTVVQLRTVVSETLSISPCS*IHPSDL
Trigger: CAAATCTGATGGATGGATTCAAGAACATGGACTAAT...TGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR GCA 90 bp AGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTGAAACTTTGTCAGGTCACAAAAAGACATaGTGTACTTTTCCACTTGTA +
Preference number: 2 (lower is better)
Translates to: RQVFTVVQLRTVVSETLSGHKKT*CTFPLV
Trigger: TACAAGTGGAAAAGTACAGCATGTCTTTTTGTGACC...TGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CCA 90 bp TTTAAAAACCAGACATGCTGTCTTAATACTCATCCATCAGGAAAGACACAGGAACTAGGAGGTGCAGGCTaGGTCCTATTGCATGGATGT +
Preference number: 2 (lower is better)
Translates to: FKNQTCCLNTHPSGKTQELGGAG*VLLHGC
Trigger: ACATCCATGCAATAGGACCCAGCCTGCACCTCCTAG...TTCCTGTGTCTTTCCTGATGGATGAGTATTAAGACAGCATGTCTGGTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CAA 90 bp GTGGCTACTATTAACAAGAACAAGGATGTGGAGAAATTGAAATTGTaGTACACCGTTGGTGGGAACATAAAATGGTGTAGCTGCTGTGGA +
Preference number: 2 (lower is better)
Translates to: VATINKNKDVEKLKL*YTVGGNIKWCSCCG
Trigger: TCCACAGCAGCTACACCATTTTATGTTCCCACCAACGGTGTACAACAATTTCAATTTCTCCACATCCTTGTTCTTGTTAATAGTAGCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CAA 90 bp AGGGTGGCTACTATTAACAAGAACAAGGATGTGGAGAAATTGAAATaGTTGTACACCGTTGGTGGGAACATAAAATGGTGTAGCTGCTGT +
Preference number: 2 (lower is better)
Translates to: RVATINKNKDVEKLK*LYTVGGNIKWCSCC
Trigger: ACAGCAGCTACACCATTTTATGTTCCCACCAACGGTGTACAACAATTTCAATTTCTCCACATCCTTGTTCTTGTTAATAGTAGCCACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 72 bp TGGGAGGCTACAGGCCCGGGGCTGGCTTGGCTCCCGTaGAAACACTGCAGCGGGCAGCCAGTCCGGAAGGCA +
Preference number: 3 (lower is better)
Translates to: WEATGPGLAWLP*KHCSGQPVRKA
Trigger: TGCCTTCCGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCTGTAGCCTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CAA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGGACAAATGGCCTCGCTaGCTGTGCTGGGCTGGCAGA +
Preference number: 3 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPDKWPR*LCWAGR
Trigger: TCTGCCAGCCCAGCACAGCAAGCGAGGCCATTTGTC...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR GCA 72 bp CCAGCAGTGACCTGGGTTCTATGTGTGGGAGTGAACTaGTGCGGCCCTGGAGCGACTGCTCCCAGCCTTGGG +
Preference number: 3 (lower is better)
Translates to: PAVTWVLCVGVN*CGPGATAPSLG
Trigger: CCCAAGGCTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAGGTCACTGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR CCA 72 bp GGACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTaGAGGCCTGTGTTCCTTCCCATAAGCAGGGCCTGT +
Preference number: 3 (lower is better)
Translates to: GRPRTGRHSPLG*RPVFLPISRAC
Trigger: ACAGGCCCTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR GCA 72 bp AGCCCTGCCAATATGCAGGGCTTGCTCCTTCGCCTCTaGGCCCTCAGTGCCTGGGAGAGATGGAATCCACGG +
Preference number: 3 (lower is better)
Translates to: SPANMQGLLLRL*ALSAWERWNPR
Trigger: CCGTGGATTCCATCTCTCCCAGGCACTGAGGGCGCAGAGGCGAAGGAGCAAGCCCTGCATATTGGCAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR GCA 72 bp AGTGCGATGGTCACAGCCCTGCCAATATGCAGGGCTTaGTCCTTCGCCTCTGCGCCCTCAGTGCCTGGGAGA +
Preference number: 3 (lower is better)
Translates to: SAMVTALPICRA*SFASAPSVPGR
Trigger: TCTCCCAGGCACTGAGGGCGCAGAGGCGAAGGAGCAAGCCCTGCATATTGGCAGGGCTGTGACCATCGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 72 bp CTCCTTCGCCTCTGCGCCCTCAGTGCCTGGGAGAGATaGAATCCACGGACCCTGTGCCACAGTCACCAGGTT +
Preference number: 3 (lower is better)
Translates to: LLRLCALSAWER*NPRTLCHSHQV
Trigger: AACCTGGTGACTGTGGCACAGGGTCCGTGGATTCCATCTCTCCCAGGCACTGAGGGCGCAGAGGCGAAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CAA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGGAGCCCCCAGGAATCTaGTCTGTTGTCCCTGGCCAC +
Preference number: 3 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQEPPGI*SVVPGH
Trigger: GTGGCCAGGGACAACAGACAAGATTCCTGGGGGCTC...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CAA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCGCTCTGTACTGTCACTaGGAACTGCCCTGGATTCCA +
Preference number: 3 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSALYCH*ELPWIP
Trigger: TGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGC...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR GCA 72 bp AGCTCAGAGGCCCACTGCTTTCAGGCCCAAGGTCGCTaGTGTGCTCTGTACTGTCACTTGGAACTGCCCTGG +
Preference number: 3 (lower is better)
Translates to: SSEAHCFQAQGR*CALYCHLELPW
Trigger: CCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAGTGGGCCTCTGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR GCA 72 bp ACTACACAACCTCAAGGGCAGGCTGTGGTACGGGGCTaGCCCACTGAGCCATCTGCAGAGGTGGTATCACTC +
Preference number: 3 (lower is better)
Translates to: TTQPQGQAVVRG*PTEPSAEVVSL
Trigger: GAGTGATACCACCTCTGCAGATGGCTCAGTGGGGCAGCCCCGTACCACAGCCTGCCCTTGAGGTTGTGTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CAA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCAAGCATGGCTTCCCCTaGGTCTTCTCAGTGAATCGT +
Preference number: 3 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSKHGFP*VFSVNR
Trigger: ACGATTCACTGAGAAGACCAAGGGGAAGCCATGCTT...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CAA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGCAGGAATCTTGTCTGTaGTCCCTGGCCACTCACAGC +
Preference number: 3 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQQESCL*SLATHS
Trigger: GCTGTGAGTGGCCAGGGACAACAGACAAGATTCCTG...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CAA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGGCTCTGTACTGTCACTaGGAACTGCCCTGGATTCCA +
Preference number: 3 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQALYCH*ELPWIP
Trigger: TGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGC...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CAA 90 bp AAACTACACAACCTCAAGGGCAGGCTGTGGTACGGGGCTGCCCCACTGAGCCATTGGGGTTTTGCCATGTaGGCCAGGGTGGTCTCGAAT +
Preference number: 3 (lower is better)
Translates to: KLHNLKGRLWYGAAPLSHWGFAM*ARVVSN
Trigger: ATTCGAGACCACCCTGGCCAACATGGCAAAACCCCA...ATGGCTCAGTGGGGCAGCCCCGTACCACAGCCTGCCCTTGAGGTTGTGTAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 72 bp CAAGGTTGGATGGATGCAGCATGGGGGAGGGAATGGTaGGGATGGGCATGGTCAGGTATCTGTCGGCTGGGA +
Preference number: 3 (lower is better)
Translates to: QGWMDAAWGREW*GWAWSGICRLG
Trigger: TCCCAGCCGACAGATACCTGACCATGCCCATCCTCACCATTCCCTCCCCCATGCTGCATCCATCCAACCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR GCA 72 bp AGAGGCCCACTGCTTTCAGGCCCAAGGTCGCTGCTGTaGTCTGTACTGTCACTTGGAACTGCCCTGGATTCC +
Preference number: 3 (lower is better)
Translates to: RGPLLSGPRSLL*SVLSLGTALDS
Trigger: GGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAGTGGGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR GCA 72 bp TCTGATCTAAGTGCGATGGTCACAGCCCTGCCAATATaGAGGGCTTGCTCCTTCGCCTCTGCGCCCTCAGTG +
Preference number: 3 (lower is better)
Translates to: SDLSAMVTALPI*RACSFASAPSV
Trigger: CACTGAGGGCGCAGAGGCGAAGGAGCAAGCCCTGCATATTGGCAGGGCTGTGACCATCGCACTTAGATCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 72 bp GACCTATCTAAACTACACAACCTCAAGGGCAGGCTGTaGTACGGGGCTGCCCCACTGAGCCATCTGCAGAGG +
Preference number: 3 (lower is better)
Translates to: DLSKLHNLKGRL*YGAAPLSHLQR
Trigger: CCTCTGCAGATGGCTCAGTGGGGCAGCCCCGTACCACAGCCTGCCCTTGAGGTTGTGTAGTTTAGATAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CAA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGAAGGATGTGGAGAAATaGAAATTGTTGTACACCGTT +
Preference number: 3 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPKDVEK*KLLYTV
Trigger: AACGGTGTACAACAATTTCAATTTCTCCACATCCTT...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CAA 90 bp CCTCAATTCCCAGGGGCTCAGAGTCCTTCTGGCCAGCTGTCCTGTGCACCATGGTGGGACCCCAGGAGGTaGTTCTGCACAATTTCAGTT +
Preference number: 3 (lower is better)
Translates to: PQFPGAQSPSGQLSCAPWWDPRR*FCTISV
Trigger: AACTGAAATTGTGCAGAACAACCTCCTGGGGTCCCA...CCATGGTGCACAGGACAGCTGGCCAGAAGGACTCTGAGCCCCTGGGAATTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
3UTR TCA 72 bp GCCTTGGTGAACCTGGCAGACCCCGTTAGGAGGTACTaGTTTCTGTCAGGCTTTCCCCAGTGTAGGCCTAGG +
Preference number: 3 (lower is better)
Translates to: ALVNLADPVRRY*FLSGFPQCRPR
Trigger: CCTAGGCCTACACTGGGGAAAGCCTGACAGAAATCAGTACCTCCTAACGGGGTCTGCCAGGTTCACCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 72 bp AGGGCATCCCTCACATCCCAACACAGGTCGGGGGTCTaGTCTAAGTGCGATGGTCACAGCCCTGCCAATATG +
Preference number: 3 (lower is better)
Translates to: RASLTSQHRSGV*SKCDGHSPANM
Trigger: CATATTGGCAGGGCTGTGACCATCGCACTTAGATCAGACCCCCGACCTGTGTTGGGATGTGAGGGATGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 72 bp CGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTaGATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGC +
Preference number: 3 (lower is better)
Translates to: RCCALYCHLELP*IPVSWSSHAEG
Trigger: GCCTTCTGCATGAGAGGACCAGGAGACTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR TCA 72 bp AGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTaGAACTTTGTCACATGGGAGGCTACAGGCCCGGGG +
Preference number: 3 (lower is better)
Translates to: SVYCGPAEDCGV*NFVTWEATGPG
Trigger: CCCCGGGCCTGTAGCCTCCCATGTGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 72 bp AATGGTGAGGATGGGCATGGTCAGGTATCTGTCGGCTaGGACAAACCTCCCAGGCCATTGAGTCCAACTTGC +
Preference number: 3 (lower is better)
Translates to: NGEDGHGQVSVG*DKPPRPLSPTC
Trigger: GCAAGTTGGACTCAATGGCCTGGGAGGTTTGTCCCAGCCGACAGATACCTGACCATGCCCATCCTCACCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 72 bp AGATCCTACTGCAGAAACCTAGGGCCAGTGACTCCTTaGGATGTCATCGTACCGATAGGTGGTGACGGTGGC +
Preference number: 3 (lower is better)
Translates to: RSYCRNLGPVTP*DVIVPIGGDGG
Trigger: GCCACCGTCACCACCTATCGGTACGATGACATCTCAAGGAGTCACTGGCCCTAGGTTTCTGCAGTAGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR GCA 72 bp TGTTGCCCAGGCTGGAGTGACATAATCTCGGCTCACTaGAACCTCCAACTCCCCGGTTCAAGTGATTCTCCT +
Preference number: 3 (lower is better)
Translates to: CCPGWSDIISAH*NLQLPGSSDSP
Trigger: AGGAGAATCACTTGAACCGGGGAGTTGGAGGTTGCAGTGAGCCGAGATTATGTCACTCCAGCCTGGGCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 72 bp AAGCACCCTCTAGAGTGCAGCCAGCTGGGCAAGGCATaGTCCTATAGGGGACAGTGTGCATGTGCATATGAA +
Preference number: 3 (lower is better)
Translates to: KHPLECSQLGKA*SYRGQCACAYE
Trigger: TTCATATGCACATGCACACTGTCCCCTATAGGACCATGCCTTGCCCAGCTGGCTGCACTCTAGAGGGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 72 bp CTCCCCAGGTGCAGAACACTTAAGGGTCCCAACATCTaGTTGAAACACAGCCCACACCAAACCACGAGATGG +
Preference number: 3 (lower is better)
Translates to: LPRCRTLKGPNI*LKHSPHQTTRW
Trigger: CCATCTCGTGGTTTGGTGTGGGCTGTGTTTCAATCAGATGTTGGGACCCTTAAGTGTTCTGCACCTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 72 bp TTCTTCTTTCAGGCTTTGTTGAGCCCCAGGTGGAGCTaGTGGTGGCATCCTTTGGACCCCACTGTAAAGTCC +
Preference number: 3 (lower is better)
Translates to: FFFQALLSPRWS*WWHPLDPTVKS
Trigger: GGACTTTACAGTGGGGTCCAAAGGATGCCACCATCAGCTCCACCTGGGGCTCAACAAAGCCTGAAAGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 72 bp AACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTaGGGGCAGGGCCCACATAGCTTGTGCATCTTAGGG +
Preference number: 3 (lower is better)
Translates to: NWLVWGRRLQVL*GQGPHSLCILG
Trigger: CCCTAAGATGCACAAGCTATGTGGGCCCTGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR GCA 72 bp TGGGCACTTACAGTCCTAAGAAGACTCCAAAGCCTCTaGCATCTTAAGCTGCCAAGGCCACTCTCAGAGGCT +
Preference number: 3 (lower is better)
Translates to: WALTVLRRLQSL*HLKLPRPLSEA
Trigger: AGCCTCTGAGAGTGGCCTTGGCAGCTTAAGATGGCAGAGGCTTTGGAGTCTTCTTAGGACTGTAAGTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 72 bp CAGGCCATTGAGTCCAACTTGCGCGAAGATAGTCACTaGGGAGCTGCAGTGACACCTGAGCCTGTGAATAAA +
Preference number: 3 (lower is better)
Translates to: QAIESNLREDSH*GAAVTPEPVNK
Trigger: TTTATTCACAGGCTCAGGTGTCACTGCAGCTCCCCAGTGACTATCTTCGCGCAAGTTGGACTCAATGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CAA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTAAACCTCCCAGGCCATaGAGTCCAACTTGCGCGAAG +
Preference number: 3 (lower is better)
Translates to: AQCLAQNAASLLNHILEVKPPRP*SPTCAK
Trigger: CTTCGCGCAAGTTGGACTCAATGGCCTGGGAGGTTT...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CAA 90 bp GGGCAGAAAGGTGTTCGCGGGCACTGGTGGGTGTTAAGTATCCTCGTTTTCCTATGGGACCCCAGGAGGTaGTTCTGCACAATTTCAGTT +
Preference number: 3 (lower is better)
Translates to: GQKGVRGHWWVLSILVFLWDPRR*FCTISV
Trigger: AACTGAAATTGTGCAGAACAACCTCCTGGGGTCCCA...TAGGAAAACGAGGATACTTAACACCCACCAGTGCCCGCGAACACCTTTCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
3UTR-3UTR CAA 90 bp TCCACAGGGCAGAAAGGTGTTCGCGGGCACTGGTGGGTGTTAAGTATCCTCGTTGCAATGAGCTTGCTCTaGCTCTCACACACGTTCTTT +
Preference number: 3 (lower is better)
Translates to: STGQKGVRGHWWVLSILVAMSLL*LSHTFF
Trigger: AAAGAACGTGTGTGAGAGCAAGAGCAAGCTCATTGC...AACGAGGATACTTAACACCCACCAGTGCCCGCGAACACCTTTCTGCCCTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409024.3
3UTR-3UTR CAA 90 bp AGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTGAAACTTTGTCACAGGAATCTTGTCTGTaGTCCCTGGCCACTCACAGC +
Preference number: 3 (lower is better)
Translates to: RQVFTVVQLRTVVSETLSQESCL*SLATHS
Trigger: GCTGTGAGTGGCCAGGGACAACAGACAAGATTCCTG...TGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CAA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTTGCACGTGCACTCACTaGAGGGCAGAGATCAGATCT +
Preference number: 3 (lower is better)
Translates to: AQCLAQNAASLLNHILEVCTCTH*RAEIRS
Trigger: AGATCTGATCTCTGCCCTCAAGTGAGTGCACGTGCA...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CAA 90 bp TCCTCGTTTTCCTATCTGAGCTTCCTCAATTCCCAGGGGCTCAGAGTCCTTCTGAAGAGAGCAATGAGCTaGCTCTTGCTCTCACACACG +
Preference number: 3 (lower is better)
Translates to: SSFSYLSFLNSQGLRVLLKRAMS*LLLSHT
Trigger: CGTGTGTGAGAGCAAGAGCAAGCTCATTGCTCTCTT...CAGAAGGACTCTGAGCCCCTGGGAATTGAGGAAGCTCAGATAGGAAAACGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409024.3
3UTR TCA 72 bp AGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTaGCTCAGGGAAGAAGTCTTGATGGGGACTCTTTGT +
Preference number: 3 (lower is better)
Translates to: RLGGWRTMLRCT*LREEVLMGTLC
Trigger: ACAAAGAGTCCCCATCAAGACTTCTTCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR TCA 72 bp TGGGTTGGGGAAGGCAAGTGTTTACTGTGGTCCAGCTaGGGACTGTGGTGTCTGAAACTTTGTCACATGGGA +
Preference number: 3 (lower is better)
Translates to: WVGEGKCLLWSS*GLWCLKLCHMG
Trigger: TCCCATGTGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCTTCCCCAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CAA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGGGGGACTCAGAAGACTaGGTAAACCTTGATAAAAAT +
Preference number: 3 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRGDSED*VNLDKN
Trigger: ATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCC...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CAA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGGGGACTCAGAAGACTaGGTAAACCTTGATAAAAAT +
Preference number: 3 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRGDSED*VNLDKN
Trigger: ATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCC...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR-3UTR CAA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCATATGCTACGCTGTACTaGACTCAGGGAAGAAGTCTT +
Preference number: 3 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQAYATLY*TQGRSL
Trigger: AAGACTTCTTCCCTGAGTCAAGTACAGCGTAGCATA...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR TCA 72 bp TCAAAACTGTCATATTCCTCTGTGCCCATGCCTTGGTaGACCTGGCAGACCCCGTTAGGAGGTACTGATTTC +
Preference number: 3 (lower is better)
Translates to: SKLSYSSVPMPW*TWQTPLGGTDF
Trigger: GAAATCAGTACCTCCTAACGGGGTCTGCCAGGTTCACCAAGGCATGGGCACAGAGGAATATGACAGTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 72 bp TGGCACGATGACAGCTTTACTGCACGTGCACTCACTTaGGGGCAGAGATCAGATCTTAAGATCCTACTGCAG +
Preference number: 3 (lower is better)
Translates to: WHDDSFTARALT*GQRSDLKILLQ
Trigger: CTGCAGTAGGATCTTAAGATCTGATCTCTGCCCTCAAGTGAGTGCACGTGCAGTAAAGCTGTCATCGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 72 bp ACTGTAAAGTCCTTGCAGACATCTGTCATGGCACGATaGCAGCTTTACTGCACGTGCACTCACTTGAGGGCA +
Preference number: 3 (lower is better)
Translates to: TVKSLQTSVMAR*QLYCTCTHLRA
Trigger: TGCCCTCAAGTGAGTGCACGTGCAGTAAAGCTGTCATCGTGCCATGACAGATGTCTGCAAGGACTTTACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR GCA 72 bp GTAATTGAAGTAAAACTGCACCAGGGTCAGGAGACCTaGGGTAGGCCCAGCAACTCTGTGACCTATCTAAAC +
Preference number: 3 (lower is better)
Translates to: VIEVKLHQGQET*GRPSNSVTYLN
Trigger: GTTTAGATAGGTCACAGAGTTGCTGGGCCTACCGCAGGTCTCCTGACCCTGGTGCAGTTTTACTTCAATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 72 bp ACCCAAGACCTGACTGTGCCAAGAAAATCCCCGCCCTaGGTTCTCAAATCCAAATGCAGAAACTGCAAACCA +
Preference number: 3 (lower is better)
Translates to: TQDLTVPRKSPP*VLKSKCRNCKP
Trigger: TGGTTTGCAGTTTCTGCATTTGGATTTGAGAACCCAGGGCGGGGATTTTCTTGGCACAGTCAGGTCTTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 72 bp AACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTTaGTTGGCTGAACGCACGTGGAACATCAGGTTCATG +
Preference number: 3 (lower is better)
Translates to: NAASLLNHILEV*LAERTWNIRFM
Trigger: CATGAACCTGATGTTCCACGTGCGTTCAGCCAATCAAACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR-3UTR CAA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTATCCATCCATCAGATTaGACTTGGGCCTACTTTCCA +
Preference number: 3 (lower is better)
Translates to: AQCLAQNAASLLNHILEVIHPSD*TWAYFP
Trigger: TGGAAAGTAGGCCCAAGTCAAATCTGATGGATGGAT...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR GCA 72 bp CTCAGATATCTGTATATCCATGTTCACAGCGTTATTTaGAACAGCCAAGAGGTGGAGGCAACCCAAGTGTCC +
Preference number: 3 (lower is better)
Translates to: LRYLYIHVHSVI*NSQEVEATQVS
Trigger: GGACACTTGGGTTGCCTCCACCTCTTGGCTGTTGCAAATAACGCTGTGAACATGGATATACAGATATCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 72 bp AGGTGGAGGCAACCCAAGTGTCCACCAACAGATGAGTaGTTAAACAAAATACGGTATATACACATGAGGAGG +
Preference number: 3 (lower is better)
Translates to: RWRQPKCPPTDE*LNKIRYIHMRR
Trigger: CCTCCTCATGTGTATATACCGTATTTTGTTTAATCACTCATCTGTTGGTGGACACTTGGGTTGCCTCCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR GCA 72 bp TTTAGGGCTTTTTCTGTCCGTGGCTCTCAATTCCGCTaGACCTTAGACTCTCTTGAAGATTTTCTAATGCCT +
Preference number: 3 (lower is better)
Translates to: FRAFSVRGSQFR*TLDSLEDFLMP
Trigger: AGGCATTAGAAAATCTTCAAGAGAGTCTAAGGTGCAGCGGAATTGAGAGCCACGGACAGAAAAAGCCCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 72 bp TTGAAATTGTTGTACACCGTTGGTGGGAACATAAAATaGTGTAGCTGCTGTGGAAAATGGGACAGCAGTTCC +
Preference number: 3 (lower is better)
Translates to: LKLLYTVGGNIK*CSCCGKWDSSS
Trigger: GGAACTGCTGTCCCATTTTCCACAGCAGCTACACCATTTTATGTTCCCACCAACGGTGTACAACAATTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 72 bp CAAGAGGTGGAGGCAACCCAAGTGTCCACCAACAGATaGGTGATTAAACAAAATACGGTATATACACATGAG +
Preference number: 3 (lower is better)
Translates to: QEVEATQVSTNR*VIKQNTVYTHE
Trigger: CTCATGTGTATATACCGTATTTTGTTTAATCACTCATCTGTTGGTGGACACTTGGGTTGCCTCCACCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 72 bp GTGCATTTCTTAGGGTCCCACTGTAAGTTGAGGGCTTaGGATTCCAAGAAAAGTCTTATTTCAGAGCTCAGT +
Preference number: 3 (lower is better)
Translates to: VHFLGSHCKLRA*DSKKSLISELS
Trigger: ACTGAGCTCTGAAATAAGACTTTTCTTGGAATCTCAAGCCCTCAACTTACAGTGGGACCCTAAGAAATGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CCA 72 bp ACCAAACCACGAGATGGCACCTCATACACATTAGGGTaGCTACTATTAACAAGAACAAGGATGTGGAGAAAT +
Preference number: 3 (lower is better)
Translates to: TKPRDGTSYTLG*LLLTRTRMWRN
Trigger: ATTTCTCCACATCCTTGTTCTTGTTAATAGTAGCCACCCTAATGTGTATGAGGTGCCATCTCGTGGTTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR TCA 72 bp AGATTAGTCCATGTTCTTGAATCCATCCATCAGATTTaGCTTGGGCCTACTTTCCAAAACTCAAATGCATCC +
Preference number: 3 (lower is better)
Translates to: RLVHVLESIHQI*LGPTFQNSNAS
Trigger: GGATGCATTTGAGTTTTGGAAAGTAGGCCCAAGTCAAATCTGATGGATGGATTCAAGAACATGGACTAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGGCTGCAGGTAGGCGGTaGAGAGGCGGGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPAAGRR*RGGPGR
Trigger: CCTGCCTGGCCCGCCTCTTCACCGCCTACCTGCAGC...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGACGGGGCTGCCCCACTaGGCCATCTGCAGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPTGLPH*AICRGG
Trigger: ACCACCTCTGCAGATGGCTCAGTGGGGCAGCCCCGT...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTGGCCTGTCCCGCCCCTaGCGACCTTCCCGACCACAA +
Preference number: 4 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGGLSRP*RPSRPQ
Trigger: TTGTGGTCGGGAAGGTCGTCAGGGGCGGGACAGGCC...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp ACAACGGATCGCCCGGTCATGTGCGCCCTGGGACCCCAGGAGGTTGTTCTGCACGATCGCCCGGTCATGTaGGCCCTGGGACCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: TTDRPVMCALGPQEVVLHDRPVM*ALGPQE
Trigger: CTCCTGGGGTCCCAGGGCGCACATGACCGGGCGATC...GTGCAGAACAACCTCCTGGGGTCCCAGGGCGCACATGACCGGGCGATCCGTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424089.5
CDS-3UTR TCA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGTTGGAATGCCCAGGGTaGCGTTCATCTCGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPLECPG*RSSRLC
Trigger: GCAGAGGCGAGATGAACGTCACCCTGGGCATTCCAA...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGTCCCAGCCTTGGGGCTaGTGTGGTCTAGAAGGACAC +
Preference number: 4 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPSQPWG*CGLEGH
Trigger: GTGTCCTTCTAGACCACATCAGCCCCAAGGCTGGGA...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGATGGCCTCGGGCCCCTaGGGCTCCTGGCTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQMASGP*GSWLWV
Trigger: CACCCACAGCCAGGAGCCCCAGGGGCCCGAGGCCAT...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGAGCCTCCCGAGTAGCTaGGATTATAGGCGCGCACCA +
Preference number: 4 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPSLPSS*DYRRAP
Trigger: TGGTGCGCGCCTATAATCCCAGCTACTCGGGAGGCT...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCGGTTTAATGCAGCCCTaGCAGCCTGGGGCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSGLMQP*QPGARS
Trigger: ACTGCGGGCCCCAGGCTGTCAGGGCTGCATTAAACC...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGGCAACCTCCACCTCCTaGGTTCAAGATTCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPATSTS*VQDSPA
Trigger: GGCAGGAGAATCTTGAACTCAGGAGGTGGAGGTTGC...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGTCCCCATACAGGAACTaGACCACACTGCCGTCACTG +
Preference number: 4 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPSPYRN*TTLPSL
Trigger: CAGTGACGGCAGTGTGGTGCAGTTCCTGTATGGGGA...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTGTGGGAGTGAACTGCTaGGGCCCTGGAGCGACTGCT +
Preference number: 4 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGVGVNC*GPGATA
Trigger: AGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCAC...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGAGGCTGGGCCCTTCCTaGCTGCCTCAAAACTGTCAT +
Preference number: 4 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPRLGPS*LPQNCH
Trigger: ATGACAGTTTTGAGGCAGGCAGGAAGGGCCCAGCCT...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGGGGTCAGAAGCTGCTTaGCCACGGCCTCTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQGSEAA*PRPLAG
Trigger: CCCAGCGAGAGGCCGTGGCCAAGCAGCTTCTGACCC...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGAGGTGCCCCCGTGGCTaGGGTCAGAAGCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQRCPRG*GQKLLG
Trigger: GCCAAGCAGCTTCTGACCCCAGCCACGGGGGCACCT...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGCGGGCACGGTGGGCCTaGATGGAGGGTCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQRARWA*MEGLCS
Trigger: ACTGCACAGACCCTCCATCCAGGCCCACCGTGCCCG...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR CAA 72 bp CTTTGTCACATGGGAGGCTACAGGCCCGGGGCTGGCTaGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LCHMGGYRPGAG*APVKTLQRAAS
Trigger: ACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCTGTAGCCTCCCATGTGACAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCGACTGGGCGATACCTTaGGGGCGGCACCACCAAGAA +
Preference number: 4 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSDWAIP*GRHHQE
Trigger: TTCTTGGTGGTGCCGCCCTCAAGGTATCGCCCAGTC...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGGTCTGGGCAGATGACTaGGCGCGCAGCGTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQVWADD*ARSVVH
Trigger: GTGGACTACGCTGCGCGCTCAGTCATCTGCCCAGAC...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCGCCCCTGAAACCATGTaGTCCTGGATCAGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSAPETM*SWISPA
Trigger: GGCGGGACTGATCCAGGATCACATGGTTTCAGGGGC...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp AGGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGGCTGCAGGTAGGCGGTaGAGAGGCGGGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RQRGWVGGGLCYAVLDSGAAGRR*RGGPGR
Trigger: CCTGCCTGGCCCGCCTCTTCACCGCCTACCTGCAGC...CCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGGGTTTAATGCAGCCCTaGCAGCCTGGGGCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQGLMQP*QPGARS
Trigger: ACTGCGGGCCCCAGGCTGTCAGGGCTGCATTAAACC...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp AAACTACACAACCTCAAGGGCAGGCTGTGGTACGGGGCTGCCCCACTGAGCCATGGCCTGTCCCGCCCCTaGCGACCTTCCCGACCACAA +
Preference number: 4 (lower is better)
Translates to: KLHNLKGRLWYGAAPLSHGLSRP*RPSRPQ
Trigger: TTGTGGTCGGGAAGGTCGTCAGGGGCGGGACAGGCC...ATGGCTCAGTGGGGCAGCCCCGTACCACAGCCTGCCCTTGAGGTTGTGTAGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGCCCGTTAGGAGGTACTaGTTTCTGTCAGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPPVRRY*FLSGFP
Trigger: GGGAAAGCCTGACAGAAATCAGTACCTCCTAACGGG...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GGGAGAGGAAACGTGGACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAAGCCCCAGGTGGAGCTaGTGGTGGCATCCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: GRGNVDGQEQGGTVLWAGSPRWS*WWHPLD
Trigger: GTCCAAAGGATGCCACCATCAGCTCCACCTGGGGCT...TCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGTCCACGTTTCCTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GGGAGAGGAAACGTGGACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTCCAGGCCTTCTaGGTAAGGAAGACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GRGNVDGQEQGGTVLWAGGLQAF*VRKTPA
Trigger: AGCTGGGGTCTTCCTTACTCAGAAGGCCTGGAGGCC...TCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGTCCACGTTTCCTCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp ATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCGCTGTGGTACGGGGCTaGCCCACTGAGCCATCTGCA +
Preference number: 4 (lower is better)
Translates to: IPVSWSSHAEGRLGHALTAVVRG*PTEPSA
Trigger: TGCAGATGGCTCAGTGGGGCAGCCCCGTACCACAGC...GGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCGCCCGGTCTTGCAGTaGGGACAGCGCTTAGCATTC +
Preference number: 4 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSRPVLQ*GQRLAF
Trigger: GAATGCTAAGCGCTGTCCCCACTGCAAGACCGGGCG...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGGCTCCTGGCTGTGGGTaGGTTTCCGGGGCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQAPGCG*VSGAAS
Trigger: TGACGCAGCCCCGGAAACCCACCCACAGCCAGGAGC...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGCCTCGCTTGCTGTGCTaGGCTGGCAGAGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLPRLLC*AGRAAG
Trigger: GCCTGCAGCTCTGCCAGCCCAGCACAGCAAGCGAGG...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp ATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCGCCCCTGAAACCATGTaGTCCTGGATCAGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: IPVSWSSHAEGRLGHALTAPETM*SWISPA
Trigger: GGCGGGACTGATCCAGGATCACATGGTTTCAGGGGC...GGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCCCGAAGGAAATGCCCTaGAGCCGCCGCCAGGGCATG +
Preference number: 4 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSPKEMP*SRRQGM
Trigger: CATGCCCTGGCGGCGGCTGCAGGGCATTTCCTTCGG...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GACAACGGATCGCCCGGTCATGTGCGCCCTGGGACCCCAGGAGGTTGTTCTGCATGGCCAGCTGTCCTGTaGACCATGGCTGGAAACGTG +
Preference number: 4 (lower is better)
Translates to: DNGSPGHVRPGTPGGCSAWPAVL*TMAGNV
Trigger: CACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCA...TGCAGAACAACCTCCTGGGGTCCCAGGGCGCACATGACCGGGCGATCCGTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424089.5
CDS-3UTR GCA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTGGCAGGTTAGAACCTTaGCGCTGGTCTCGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGGRLEP*RWSRLH
Trigger: ATGGAGGCGAGACCAGCGGCAAGGTTCTAACCTGCC...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GGGAGAGGAAACGTGGACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCAGGTTAGAACCTTaGCGCTGGTCTCGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: GRGNVDGQEQGGTVLWAGGRLEP*RWSRLH
Trigger: ATGGAGGCGAGACCAGCGGCAAGGTTCTAACCTGCC...TCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGTCCACGTTTCCTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTCGCTGCCACTTCAGCTaGAGCAAGGTCCTCAACCTG +
Preference number: 4 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGRCHFS*SKVLNL
Trigger: CAGGTTGAGGACCTTGCTGCAGCTGAAGTGGCAGCG...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp ATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCGAGCTGGGCAGATGGTaGCGGGGTAGCTGCTATCTC +
Preference number: 4 (lower is better)
Translates to: IPVSWSSHAEGRLGHALTELGRW*RGSCYL
Trigger: GAGATAGCAGCTACCCCGGCACCATCTGCCCAGCTC...GGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp ATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCCTCCTGGTCCTCTCATaGAGAAGGCAGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: IPVSWSSHAEGRLGHALTLLVLS*RRQAGP
Trigger: TGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAG...GGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTTCCCTACTCTGGAGGTaGCTGGGGTCCCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGSLLWR*LGSPAA
Trigger: TGCTGCTGGGGACCCCAGGCACCTCCAGAGTAGGGA...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCACAGCCCTGCCAATATaGAGGGCTTGCTCCTTCGCC +
Preference number: 4 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSTALPI*RACSFA
Trigger: GGCGAAGGAGCAAGCCCTGCATATTGGCAGGGCTGT...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp ATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCGGCTCAGAGTCCTTCTaGCCAGCTGTCCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: IPVSWSSHAEGRLGHALTGSESF*PAVLCT
Trigger: GGTGCACAGGACAGCTGGCCAGAAGGACTCTGAGCC...GGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCGGGTCAGAAGCTGCTTaGCCACGGCCTCTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: LSLATHSKRTPLPYSGGAGSEAA*PRPLAG
Trigger: CCCAGCGAGAGGCCGTGGCCAAGCAGCTTCTGACCC...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTCGGCCCAGCTCACTCTaGGGGAAATGGGCATTCATC +
Preference number: 4 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGRPSSL*GKWAFI
Trigger: GATGAATGCCCATTTCCCCCAGAGTGAGCTGGGCCG...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GGGAGAGGAAACGTGGACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGTGTTGAGGGTCATCTaGGTGGAGGGCTCTCCGATG +
Preference number: 4 (lower is better)
Translates to: GRGNVDGQEQGGTVLWAGVLRVI*VEGSPM
Trigger: CATCGGAGAGCCCTCCACCCAGATGACCCTCAACAC...TCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGTCCACGTTTCCTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCGTGTTGAGGGTCATCTaGGTGGAGGGCTCTCCGATG +
Preference number: 4 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSVLRVI*VEGSPM
Trigger: CATCGGAGAGCCCTCCACCCAGATGACCCTCAACAC...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTGACCTCAGCTCATCGTaGGATCCCAGCATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGDLSSS*DPSMVA
Trigger: AGCCACCATGCTGGGATCCCACGATGAGCTGAGGTC...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTTCTGCCCCCAGGGGCTaGAGCAGCCGGAAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QAQGRCCALYCHLELPWISAPRG*SSRKEQ
Trigger: CTGCTCCTTCCGGCTGCTCCAGCCCCTGGGGGCAGA...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGTGCCCAGGAACCATGTaGATGGGTGGGGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQCPGTM*MGGAGG
Trigger: CCCTCCTGCCCCACCCATCCACATGGTTCCTGGGCA...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CAA 72 bp AAGTGCGATGGTCACAGCCCTGCCAATATGCAGGGCTaGCTCCTTCGCCTCTGCGCCCTCAGTGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: KCDGHSPANMQG*LLRLCALSAWE
Trigger: CTCCCAGGCACTGAGGGCGCAGAGGCGAAGGAGCAAGCCCTGCATATTGGCAGGGCTGTGACCATCGCACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp ATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCGGAACAAGGTACTGCTaGTCAGTGCAGGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: IPVSWSSHAEGRLGHALTGTRYC*SVQART
Trigger: CGTCCTGGCCTGCACTGATCAGCAGTACCTTGTTCC...GGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp ATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCCTTCCACGCCCAAGGTaGAGCCTCTGTAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: IPVSWSSHAEGRLGHALTLPRPR*SLCRAA
Trigger: TGCAGCTCTACAGAGGCTTCACCTTGGGCGTGGAAG...GGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp AGGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGGCCCGGCTCACACAGTaGGCGCTGCCACTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RQRGWVGGGLCYAVLDSGARLTQ*ALPLQL
Trigger: CAGCTGAAGTGGCAGCGCTCACTGTGTGAGCCGGGC...CCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGGCCCGGCTCACACAGTaGGCGCTGCCACTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQARLTQ*ALPLQL
Trigger: CAGCTGAAGTGGCAGCGCTCACTGTGTGAGCCGGGC...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGTTGGAATGCCCAGGGTaGCGTTCATCTCGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQLECPG*RSSRLC
Trigger: GCAGAGGCGAGATGAACGTCACCCTGGGCATTCCAA...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGATCTCAGAGGCTGCTTaGGCTCGAACAGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQISEAA*ARTGLS
Trigger: GGACAGGCCTGTTCGAGCTCAAGCAGCCTCTGAGAT...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAGGAGGCTGCAGAGGCTaGGCTCTTCCCCCTAAGGCC +
Preference number: 4 (lower is better)
Translates to: GREVGWVEDYATLYLTQGGGCRG*ALPPKA
Trigger: GGCCTTAGGGGGAAGAGCTCAGCCTCTGCAGCCTCC...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGGCTGGGGTCAGAAGCTaGTTGGCCACGGCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGAGVRS*LATASR
Trigger: GCGAGAGGCCGTGGCCAAGCAGCTTCTGACCCCAGC...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTCTCTTCAGGCAGGATaGGGGCACGGTGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LSLATHSKRTPLPYSGGASLQAG*GHGGPG
Trigger: TCCAGGCCCACCGTGCCCGCATCCTGCCTGAAGAGA...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CTGCTTTCAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCTGGAGGGCTCTCCGATaGTCTGGGCAGCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LLSGPRSLLCSVLSLGTAWRALR*SGQPAG
Trigger: GCCTGCTGGCTGCCCAGAGCATCGGAGAGCCCTCCA...GGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGGAGGGCTCTCCGATaGTCTGGGCAGCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRWRALR*SGQPAG
Trigger: GCCTGCTGGCTGCCCAGAGCATCGGAGAGCCCTCCA...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGCACACCCTGGTGAGTTaGTTCTTCAGGCTTTTCACT +
Preference number: 4 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPHTLVS*FFRLFT
Trigger: AGTGAAAAGCCTGAAGAAGCAACTCACCAGGGTGTG...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp GGAGGGGCAAGGATGAGCAACTCTGTCACTTTCCAGGTGAAGCTGGCCCAGCTCTCCTCATCACCCTCCTaGTCTCCCCGACTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GGARMSNSVTFQVKLAQLSSSPS*SPRLLP
Trigger: GGGGAGGAGTCGGGGAGAGCAGGAGGGTGATGAGGA...GAGCTGGGCCAGCTTCACCTGGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCTGCAGCACAGGTGAGGTCCTCATCACCCTCCTaGTCTCCCCGACTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: QDFSLGVMPQRPPAAQVRSSSPS*SPRLLP
Trigger: GGGGAGGAGTCGGGGAGAGCAGGAGGGTGATGAGGA...CCTCACCTGTGCTGCAGGAGGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGACAGGCTCCACGTTCCTaGTCATCGGGAGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GREVGWVEDYATLYLTQGQAPRS*SSGAPR
Trigger: CCTGGGGGCTCCCGATGAGCAGGAACGTGGAGCCTG...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGCCACGCGATTCAACGTaGGCTTGCGCGCGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRPRDST*ACARKR
Trigger: CCGCTTCCGCGCGCAAGCGCACGTTGAATCGCGTGG...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409681.1
CDS-3UTR CCA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCTTTACATGTGCGCCCTaGGACCCCAGGAGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSFTCAP*DPRRLF
Trigger: GAACAACCTCCTGGGGTCCCAGGGCGCACATGTAAA...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGTTCCTGAACATTCCATaGGGTAACTGGCTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPFLNIP*GNWLWV
Trigger: TACCCACAGCCAGTTACCCCATGGAATGTTCAGGAA...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp AGGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGGCCACGGCCTCTCGCTaGGTCATGTCCACAGCGCTC +
Preference number: 4 (lower is better)
Translates to: RQRGWVGGGLCYAVLDSGATASR*VMSTAL
Trigger: GAGCGCTGTGGACATGACCCAGCGAGAGGCCGTGGC...CCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGAGGATGCGGGCACGGTaGGCCTGGATGGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGRMRAR*AWMEGL
Trigger: CAGACCCTCCATCCAGGCCCACCGTGCCCGCATCCT...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAGGATGCGGGCACGGTaGGCCTGGATGGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PVGCMGQNIGLHTKLTAERMRAR*AWMEGL
Trigger: CAGACCCTCCATCCAGGCCCACCGTGCCCGCATCCT...CTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTGATCAGTCCCGCCAATaGTTGGCCATCCTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGDQSRQ*LAILGN
Trigger: GTTCCCAAGGATGGCCAACCATTGGCGGGACTGATC...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GGGAGAGGAAACGTGGACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGACCTTCCAGTTCAATCTaGCCCAGCAGGCACGAGATC +
Preference number: 4 (lower is better)
Translates to: GRGNVDGQEQGGTVLWAGPSSSI*PSRHEI
Trigger: GATCTCGTGCCTGCTGGGCCAGATTGAACTGGAAGG...TCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGTCCACGTTTCCTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGGGCTCTCCGATGCTCTaGGCAGCCAGCAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGGSPML*AASRPT
Trigger: TGTGGGCCTGCTGGCTGCCCAGAGCATCGGAGAGCC...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AAACTACACAACCTCAAGGGCAGGCTGTGGTACGGGGCTGCCCCACTGAGCCATGCAACCAGGGAGAGATaGCGAGGGTCGACCGCGATG +
Preference number: 4 (lower is better)
Translates to: KLHNLKGRLWYGAAPLSHATRER*RGSTAM
Trigger: CATCGCGGTCGACCCTCGCCATCTCTCCCTGGTTGC...ATGGCTCAGTGGGGCAGCCCCGTACCACAGCCTGCCCTTGAGGTTGTGTAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GGGAGAGGAAACGTGGACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGACACTTGGAACTGCCCTaGATTCCAGTCTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GRGNVDGQEQGGTVLWAGHLELP*IPVSWS
Trigger: GGACCAGGAGACTGGAATCCAGGGCAGTTCCAAGTG...TCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGTCCACGTTTCCTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCTGCAGCACAGGTGAGGGGAAGGAGCAGGCCTTaGGCAGCAGGCTCCACGTTC +
Preference number: 4 (lower is better)
Translates to: QDFSLGVMPQRPPAAQVRGRSRP*AAGSTF
Trigger: GAACGTGGAGCCTGCTGCCCAAGGCCTGCTCCTTCC...CCTCACCTGTGCTGCAGGAGGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCGGAAGGAGCAGGCCTTaGGCAGCAGGCTCCACGTTC +
Preference number: 4 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSGRSRP*AAGSTF
Trigger: GAACGTGGAGCCTGCTGCCCAAGGCCTGCTCCTTCC...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGGAGGGAGAGGAAACGTaGACGGCCAAGAACAGGGCG +
Preference number: 4 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQEGEET*TAKNRA
Trigger: CGCCCTGTTCTTGGCCGTCCACGTTTCCTCTCCCTC...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGCTCAAGGGCAGGCTGTaGTACGGGGCTGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQLKGRL*YGAAPL
Trigger: CAGTGGGGCAGCCCCGTACCACAGCCTGCCCTTGAG...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGGACAATTCTTTGCTGTaGAGACTGTCCTGTGGACTG +
Preference number: 4 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPDNSLL*RLSCGL
Trigger: CAGTCCACAGGACAGTCTCCACAGCAAAGAATTGTC...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GGAGGGGCAAGGATGAGCAACTCTGTCACTTTCCAGGTGAAGCTGGCCCAGCTCTGGCGCTGGCCACCATaGGAATCTCCCGCAACCTTG +
Preference number: 4 (lower is better)
Translates to: GGARMSNSVTFQVKLAQLWRWPP*ESPATL
Trigger: CAAGGTTGCGGGAGATTCTCATGGTGGCCAGCGCCA...GAGCTGGGCCAGCTTCACCTGGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTGCATGTGGCAGGAACTaGAACCGCAGCTGGTACACC +
Preference number: 4 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGACGRN*NRSWYT
Trigger: GGTGTACCAGCTGCGGTTTCAGTTCCTGCCACATGC...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGATCTCAGAGGCTGCTTaGGCTCGAACAGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLISEAA*ARTGLS
Trigger: GGACAGGCCTGTTCGAGCTCAAGCAGCCTCTGAGAT...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGTTCTATGTGTGGGAGTaGACTGCTGCGGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLFYVWE*TAAALE
Trigger: CTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAA...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTCAATCGCCCCAGCAGTaGCCTGGGTTCTATGTGTGG +
Preference number: 4 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGQSPQQ*PGFYVW
Trigger: CCACACATAGAACCCAGGTCACTGCTGGGGCGATTG...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAAGCCGAAGGAAATGCCCTaGAGCCGCCGCCAGGGCATG +
Preference number: 4 (lower is better)
Translates to: QRGWVGGGLCYAVLDSGKPKEMP*SRRQGM
Trigger: CATGCCCTGGCGGCGGCTGCAGGGCATTTCCTTCGG...CTTCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CTCAGAGTCCTTCTGGCCAGCTGTCCTGTGCACCATGGCTGGAAACGTGATAGTCCGAAGGAAATGCCCTaGAGCCGCCGCCAGGGCATG +
Preference number: 4 (lower is better)
Translates to: LRVLLASCPVHHGWKRDSPKEMP*SRRQGM
Trigger: CATGCCCTGGCGGCGGCTGCAGGGCATTTCCTTCGG...ACTATCACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCAGAAGGACTCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR GCA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGCAGTTGCTGAAGTCCTaGACGCAGGTGGAGCACACC +
Preference number: 4 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLQLLKS*TQVEHT
Trigger: GGTGTGCTCCACCTGCGTGCAGGACTTCAGCAACTG...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGTGGCCAGCTGTCCTGTaGACCATGGCTGGAAACGTG +
Preference number: 4 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLWPAVL*TMAGNV
Trigger: CACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCA...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTTGGCCAGCTGTCCTGTaGACCATGGCTGGAAACGTG +
Preference number: 4 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGWPAVL*TMAGNV
Trigger: CACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCA...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCGGCATTATAGGCCTTaGAGTTGGCATAGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSRHYRP*SWHSGA
Trigger: GGCTCCACTATGCCAACTGCAAGGCCTATAATGCCG...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGGCAGCGCGGCCTCAATaGCATACGTGTTGGCTATGG +
Preference number: 4 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQAARPQ*HTCWLW
Trigger: CCATAGCCAACACGTATGGCATTGAGGCCGCGCTGC...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCGAGCTGGGCAGATGGTaGCGGGGTAGCTGCTATCTC +
Preference number: 4 (lower is better)
Translates to: LSLATHSKRTPLPYSGGAELGRW*RGSCYL
Trigger: GAGATAGCAGCTACCCCGGCACCATCTGCCCAGCTC...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTCAGGCCCAAGGTCGCTaGTGTGCTCTGTACTGTCAC +
Preference number: 4 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGQAQGR*CALYCH
Trigger: GTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGCTCAGAGGCCCACTaGTTTCAGGCCCAAGGTCGC +
Preference number: 4 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSSSEAH*FQAQGR
Trigger: GCGACCTTGGGCCTGAAAGCAGTGGGCCTCTGAGCT...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GGGAGAGGAAACGTGGACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGACAGGCTGGGTCCTATTaGATGGATGTAGGGAGCAAC +
Preference number: 4 (lower is better)
Translates to: GRGNVDGQEQGGTVLWAGQAGSY*MDVGSN
Trigger: GTTGCTCCCTACATCCATGCAATAGGACCCAGCCTG...TCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGTCCACGTTTCCTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTTGCTCCTTCGCCTCTaGGCCCTCAGTGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRLLLRL*ALSAWE
Trigger: CTCCCAGGCACTGAGGGCGCAGAGGCGAAGGAGCAA...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp CAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCTGCAGCACAGGTGAGGCCAATATGCAGGGCTTaGTCCTTCGCCTCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: QDFSLGVMPQRPPAAQVRPICRA*SFASAP
Trigger: GGGCGCAGAGGCGAAGGAGCAAGCCCTGCATATTGG...CCTCACCTGTGCTGCAGGAGGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCAGGCCGTTTGCCGATaGGTTCCCCAGGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: QAQGRCCALYCHLELPWIQAVCR*VPQAVQ
Trigger: CTGGACAGCCTGGGGAACCCATCGGCAAACGGCCTG...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGGGTAGGTCAGTTTTGTaGCAAACACCATGGGAATTC +
Preference number: 4 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPGRSVL*QTPWEF
Trigger: GAATTCCCATGGTGTTTGCCACAAAACTGACCTACC...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGGACCATGGAGGCTCCTaGGTGCACATTAGGGCCGTT +
Preference number: 4 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQDHGGS*VHIRAV
Trigger: AACGGCCCTAATGTGCACCCAGGAGCCTCCATGGTC...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGGATCAGTCCCGCCAATaGTTGGCCATCCTTGGGAAC +
Preference number: 4 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQDQSRQ*LAILGN
Trigger: GTTCCCAAGGATGGCCAACCATTGGCGGGACTGATC...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGGCCTGGGGCCCGCAGTaGGTGGATTCTTCAATGATA +
Preference number: 4 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQAWGPQ*VDSSMI
Trigger: TATCATTGAAGAATCCACCCACTGCGGGCCCCAGGC...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTGATAGCCTGAGCGGCTaGTTTTCACAGCAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGDSLSG*FSQQCP
Trigger: TGGACACTGCTGTGAAAACCAGCCGCTCAGGCTATC...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCCTCACCAAGGGTCCTTaGAGCTGGGCAGATGGTGCC +
Preference number: 4 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSLTKGP*SWADGA
Trigger: GGCACCATCTGCCCAGCTCCAAGGACCCTTGGTGAG...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CTGCTTTCAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCATGCAGAAGGCAGGCTaGGCCACGCCCTCACCAAGG +
Preference number: 4 (lower is better)
Translates to: LLSGPRSLLCSVLSLGTAMQKAG*ATPSPR
Trigger: CCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCAT...GGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp ATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCCACTTGGAACTGCCCTaGATTCCAGTCTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: IPVSWSSHAEGRLGHALTHLELP*IPVSWS
Trigger: GGACCAGGAGACTGGAATCCAGGGCAGTTCCAAGTG...GGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCGCCAGGCAGAGAGGTTaGGTGGGTGGAGGACTATGC +
Preference number: 4 (lower is better)
Translates to: LSLATHSKRTPLPYSGGAARQRG*VGGGLC
Trigger: GCATAGTCCTCCACCCACCCAACCTCTCTGCCTGGC...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCCACAGTCCTCTGGGCTaGAGGCCTGTGTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LSLATHSKRTPLPYSGGAHSPLG*RPVFLP
Trigger: GGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTG...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp ATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCGTAGGAAACGCTGGCTaGCTGAGTTCCCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: IPVSWSSHAEGRLGHALTVGNAG*LSSLLL
Trigger: CAGAAGGAGGGAACTCAGCCAGCCAGCGTTTCCTAC...GGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTTCCAGAAGAGAGCAATaGGCTTGCTCTTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGSRREQ*ACSCSH
Trigger: GTGAGAGCAAGAGCAAGCTCATTGCTCTCTTCTGGA...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GACAACGGATCGCCCGGTCATGTGCGCCCTGGGACCCCAGGAGGTTGTTCTGCACCTCGTTTTCCTATCTaGGCTTCCTCAATTCCCAGG +
Preference number: 4 (lower is better)
Translates to: DNGSPGHVRPGTPGGCSAPRFPI*ASSIPR
Trigger: CCTGGGAATTGAGGAAGCTCAGATAGGAAAACGAGG...TGCAGAACAACCTCCTGGGGTCCCAGGGCGCACATGACCGGGCGATCCGTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424089.5
CDS-3UTR TCA 90 bp AAACTACACAACCTCAAGGGCAGGCTGTGGTACGGGGCTGCCCCACTGAGCCATGGAACAAGGTACTGCTaGTCAGTGCAGGCCAGGACG +
Preference number: 4 (lower is better)
Translates to: KLHNLKGRLWYGAAPLSHGTRYC*SVQART
Trigger: CGTCCTGGCCTGCACTGATCAGCAGTACCTTGTTCC...ATGGCTCAGTGGGGCAGCCCCGTACCACAGCCTGCCCTTGAGGTTGTGTAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAGCCCCACTTTGTCCGTaGGTCCTCGGTACACCAGCT +
Preference number: 4 (lower is better)
Translates to: GREVGWVEDYATLYLTQGAPLCP*VLGTPA
Trigger: AGCTGGTGTACCGAGGACTCACGGACAAAGTGGGGC...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTCACTGTCACGGACCGTaGGATCATACTGCACGACCA +
Preference number: 4 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGHCHGP*DHTARP
Trigger: TGGTCGTGCAGTATGATCTCACGGTCCGTGACAGTG...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTTCATCATGGGTGTCTTaGTGTTGGCGCTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGSSWVS*CWRWPP
Trigger: TGGTGGCCAGCGCCAACATCAAGACACCCATGATGA...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCTGCAGCACAGGTGAGGGGGCTTTCTTGGTGTTaGGCACGGGCACGCTCATCA +
Preference number: 4 (lower is better)
Translates to: QDFSLGVMPQRPPAAQVRGLSWC*ARARSS
Trigger: TGATGAGCGTGCCCGTGCTCAACACCAAGAAAGCCC...CCTCACCTGTGCTGCAGGAGGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp AAACTACACAACCTCAAGGGCAGGCTGTGGTACGGGGCTGCCCCACTGAGCCATTTCTATGTGTGGGAGTaGACTGCTGCGGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KLHNLKGRLWYGAAPLSHFYVWE*TAAALE
Trigger: CTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAA...ATGGCTCAGTGGGGCAGCCCCGTACCACAGCCTGCCCTTGAGGTTGTGTAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGGGGGAGGGAATGGTaGGGATGGGCATGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRWGREW*GWAWSG
Trigger: ACCTGACCATGCCCATCCTCACCATTCCCTCCCCCA...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp TTCTTCCACAGGGCAGAAAGGTGTTCGCGGGCACTGGTGGGTGTTAAGTATCCTCCGAAGGAAATGCCCTaGAGCCGCCGCCAGGGCATG +
Preference number: 4 (lower is better)
Translates to: FFHRAERCSRALVGVKYPPKEMP*SRRQGM
Trigger: CATGCCCTGGCGGCGGCTGCAGGGCATTTCCTTCGG...AGGATACTTAACACCCACCAGTGCCCGCGAACACCTTTCTGCCCTGTGGAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR GCA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCCAGTTGCTGAAGTCCTaGACGCAGGTGGAGCACACC +
Preference number: 4 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSQLLKS*TQVEHT
Trigger: GGTGTGCTCCACCTGCGTGCAGGACTTCAGCAACTG...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp ATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCTCCTTCATGACAGCCTaGAAGTTCACCGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: IPVSWSSHAEGRLGHALTSFMTA*KFTVWP
Trigger: TGGCCAGACGGTGAACTTGCAGGCTGTCATGAAGGA...GGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGATGGAGGCTCCTGGGTaGACATTAGGGCCGTTGATG +
Preference number: 4 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLMEAPG*TLGPLM
Trigger: CATCAACGGCCCTAATGTGCACCCAGGAGCCTCCAT...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AGGAATCTTGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTGCTGGGGTCAGAAGCTaGTTGGCCACGGCCTCTCGC +
Preference number: 4 (lower is better)
Translates to: RNLVCCPWPLTAKEPRFPAGVRS*LATASR
Trigger: GCGAGAGGCCGTGGCCAAGCAGCTTCTGACCCCAGC...AGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGCGGCATTATAGGCCTTaGAGTTGGCATAGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQRHYRP*SWHSGA
Trigger: GGCTCCACTATGCCAACTGCAAGGCCTATAATGCCG...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTCAGGCCCTCTCGTCCTaGCATGCAGTGGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGQALSS*HAVEEE
Trigger: TTCTTCTTCCACTGCATGGCAGGACGAGAGGGCCTG...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp ATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCCAGGGCTGCGGCCATTaGGGTTTTCACTCTCAAGTT +
Preference number: 4 (lower is better)
Translates to: IPVSWSSHAEGRLGHALTQGCGH*GFHSQV
Trigger: AACTTGAGAGTGAAAACCGCAATGGCCGCAGCCCTG...GGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCTGGACGTCAATTTTCTaGAACACCTCCCCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSWTSIF*NTSPKH
Trigger: GTGCTTGGGGGAGGTGTTGCAGAAAATTGACGTCCA...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCTGGTGCCGGGGTAGCTaGTATCTCAGAGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSWCRGS*YLRGCL
Trigger: CAAGCAGCCTCTGAGATAGCAGCTACCCCGGCACCA...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CTGCTTTCAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCAGCTCAGAGGCCCACTaGTTTCAGGCCCAAGGTCGC +
Preference number: 4 (lower is better)
Translates to: LLSGPRSLLCSVLSLGTASSEAH*FQAQGR
Trigger: GCGACCTTGGGCCTGAAAGCAGTGGGCCTCTGAGCT...GGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAACTCTTTGTGGACTCTaGCCCCAGGGGCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRTLCGL*PQGLEQ
Trigger: CTGCTCCAGCCCCTGGGGGCAGAGTCCACAAAGAGT...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGACTCTTTGTGGACTCTaGCCCCAGGGGCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGTLCGL*PQGLEQ
Trigger: CTGCTCCAGCCCCTGGGGGCAGAGTCCACAAAGAGT...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCGTGGGTGGAGGACTATaGTACGCTGTACTTGACTCA +
Preference number: 4 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSVGGGL*YAVLDS
Trigger: TGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCAC...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGACAGGGTCAGGAGACCTaGGGTAGGCCCAGCAACTCT +
Preference number: 4 (lower is better)
Translates to: GREVGWVEDYATLYLTQGQGQET*GRPSNS
Trigger: AGAGTTGCTGGGCCTACCGCAGGTCTCCTGACCCTG...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGGCGATCACAGCTCATTaGAGCCTTGAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLAITAH*SLELLG
Trigger: GCCCAGGAGTTCAAGGCTGCAATGAGCTGTGATCGC...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp CCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGCCCTCCTTCTGCCCCTaGTGGACAAATGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: PVGCMGQNIGLHTKLTAEPSFCP*WTNGLA
Trigger: AGCGAGGCCATTTGTCCAGCAGGGGCAGAAGGAGGG...CTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGAGTCCTGCACGCAGGTaGAGCACACCTCTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQSPARR*STPLWN
Trigger: ATTCCAAAGAGGTGTGCTCCACCTGCGTGCAGGACT...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTGGTGTTCGCGGGCACTaGTGGGTGTTAAGTATCCTC +
Preference number: 4 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGGVRGH*WVLSIL
Trigger: GAGGATACTTAACACCCACCAGTGCCCGCGAACACC...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCACGGGCACGGTGGGCCTaGATGGAGGGTCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQARARWA*MEGLCS
Trigger: ACTGCACAGACCCTCCATCCAGGCCCACCGTGCCCG...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp ATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCTATAGGCCTTGCAGTTaGCATAGTGGAGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: IPVSWSSHAEGRLGHALTYRPCS*HSGAAA
Trigger: TGCTGCGGCTCCACTATGCCAACTGCAAGGCCTATA...GGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGGCAGGAACTGTGTCTTaGGGATGTCCAGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQAGTVS*GCPGHP
Trigger: AGGATGGCCTGGACATCCCCAAGACACAGTTCCTGC...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GGGAGAGGAAACGTGGACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGATTCTCAGCAGGGTGTTaGGGTGCTTGCTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: GRGNVDGQEQGGTVLWAGFSAGC*GACFAI
Trigger: AATGGCAAAGCAAGCACCCCAACACCCTGCTGAGAA...TCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGTCCACGTTTCCTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GGAGGGGCAAGGATGAGCAACTCTGTCACTTTCCAGGTGAAGCTGGCCCAGCTCCGAGCACCTTCCCTGTaGGGATTTCGTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GGARMSNSVTFQVKLAQLRAPSL*GFRSSC
Trigger: GCAGGAGGAACGAAATCCCCACAGGGAAGGTGCTCG...GAGCTGGGCCAGCTTCACCTGGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GGGAGAGGAAACGTGGACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGACAATGCCATACGTGTTaGCTATGGCGTGGATGTCGT +
Preference number: 4 (lower is better)
Translates to: GRGNVDGQEQGGTVLWAGQCHTC*LWRGCR
Trigger: ACGACATCCACGCCATAGCCAACACGTATGGCATTG...TCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGTCCACGTTTCCTCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GGAGGGGCAAGGATGAGCAACTCTGTCACTTTCCAGGTGAAGCTGGCCCAGCTCGACCTCAGCTCATCGTaGGATCCCAGCATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GGARMSNSVTFQVKLAQLDLSSS*DPSMVA
Trigger: AGCCACCATGCTGGGATCCCACGATGAGCTGAGGTC...GAGCTGGGCCAGCTTCACCTGGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGAAGGGTCCTTGGAGCTaGGCAGATGGTGCCGGGGTA +
Preference number: 4 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQKGPWS*ADGAGV
Trigger: TACCCCGGCACCATCTGCCCAGCTCCAAGGACCCTT...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGTACTCTGGAGGTGCCTaGGGTCCCCAGCAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQYSGGA*GPQQQS
Trigger: GCTTTGCTGCTGGGGACCCCAGGCACCTCCAGAGTA...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGATACTCTGGAGGTGCCTaGGGTCCCCAGCAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRYSGGA*GPQQQS
Trigger: GCTTTGCTGCTGGGGACCCCAGGCACCTCCAGAGTA...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGGCCAGGCAGAGAGGTTaGGTGGGTGGAGGACTATGC +
Preference number: 4 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQARQRG*VGGGLC
Trigger: GCATAGTCCTCCACCCACCCAACCTCTCTGCCTGGC...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCAGAACTGCTGCGGCCCTaGAGCGACTGCTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQAELLRP*SDCSQP
Trigger: AGGCTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTC...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGACACAGTCCTCTGGGCTaGAGGCCTGTGTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRHSPLG*RPVFLP
Trigger: GGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTG...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGACAGGAACCATGTGGATaGGTGGGGCAGGAGGGCATC +
Preference number: 4 (lower is better)
Translates to: GREVGWVEDYATLYLTQGQEPCG*VGQEGI
Trigger: GATGCCCTCCTGCCCCACCCATCCACATGGTTCCTG...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGGCAGCCTTGAACTCCTaGGCTCACTTGCTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLAALNS*AHLLLS
Trigger: TGAGAGGAGCAAGTGAGCCCAGGAGTTCAAGGCTGC...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTCGCGAAGATAGTCACTaGGGAGCTGCAGTGACACCT +
Preference number: 4 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGREDSH*GAAVTP
Trigger: AGGTGTCACTGCAGCTCCCCAGTGACTATCTTCGCG...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGGAGGGTTATACACTGTaGGTGGGAGCTCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQEGYTL*VGAQCG
Trigger: GCCACATTGAGCTCCCACTCACAGTGTATAACCCTC...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGTGGCAGAGTAAGAGGTaGATCACGGCCCGGGGACAA +
Preference number: 4 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQWQSKR*ITARGQ
Trigger: TTGTCCCCGGGCCGTGATTCACCTCTTACTCTGCCA...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGGCAGAGTAAGAGGTaGATCACGGCCCGGGGACAA +
Preference number: 4 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRWQSKR*ITARGQ
Trigger: TTGTCCCCGGGCCGTGATTCACCTCTTACTCTGCCA...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCGTCTGGGCAGATGACTaGGCGCGCAGCGTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSVWADD*ARSVVH
Trigger: GTGGACTACGCTGCGCGCTCAGTCATCTGCCCAGAC...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCATCCTCAGCATCTCCTaGGTCCCAGGGCTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSILSIS*VPGLRP
Trigger: TGGCCGCAGCCCTGGGACTCAGGAGATGCTGAGGAT...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAAGTGGCGCTGGCCACCATaGGAATCTCCCGCAACCTTG +
Preference number: 4 (lower is better)
Translates to: QRGWVGGGLCYAVLDSGKWRWPP*ESPATL
Trigger: CAAGGTTGCGGGAGATTCTCATGGTGGCCAGCGCCA...CTTCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCTGCAGCACAGGTGAGGTCATCATGGGTGTCTTaGTGTTGGCGCTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: QDFSLGVMPQRPPAAQVRSSWVS*CWRWPP
Trigger: TGGTGGCCAGCGCCAACATCAAGACACCCATGATGA...CCTCACCTGTGCTGCAGGAGGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGGGCTTTCTTGGTGTTaGGCACGGGCACGCTCATCA +
Preference number: 4 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRGLSWC*ARARSS
Trigger: TGATGAGCGTGCCCGTGCTCAACACCAAGAAAGCCC...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGCCAAGCACACCCTGGTaGGTTGCTTCTTCAGGCTTT +
Preference number: 4 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQPSTPW*VASSGF
Trigger: AAAGCCTGAAGAAGCAACTCACCAGGGTGTGCTTGG...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp AGGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGCCTTGGTCGCATAGATaGCGGCACCATGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: RQRGWVGGGLCYAVLDSGPWSHR*RHHGPK
Trigger: CTTTGGCCCATGGTGCCGTCATCTATGCGACCAAGG...CCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGCTGTCACTTTCCAGGTaGAGCTGGCCCAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRLSLSR*SWPSSE
Trigger: CTCTGAGCTGGGCCAGCTTCACCTGGAAAGTGACAG...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGCTGTCACTTTCCAGGTaGAGCTGGCCCAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGLSLSR*SWPSSE
Trigger: CTCTGAGCTGGGCCAGCTTCACCTGGAAAGTGACAG...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCACTCCTGCAGCACAGGTaGGGCCCCAGCCATCTCAGG +
Preference number: 4 (lower is better)
Translates to: EDGELACLGQKTTSSVRALLQHR*GPSHLR
Trigger: CCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGAG...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCCTTGGTCTTCTCAGTaGATCGTGAATCAGGACTTC +
Preference number: 4 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSPWSSQ*IVNQDF
Trigger: GAAGTCCTGATTCACGATTCACTGAGAAGACCAAGG...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGATCCCAGCCTTGGGGCTaGTGTGGTCTAGAAGGACAC +
Preference number: 4 (lower is better)
Translates to: GREVGWVEDYATLYLTQGSQPWG*CGLEGH
Trigger: GTGTCCTTCTAGACCACATCAGCCCCAAGGCTGGGA...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGACAATCGCCCCAGCAGTaGCCTGGGTTCTATGTGTGG +
Preference number: 4 (lower is better)
Translates to: GREVGWVEDYATLYLTQGQSPQQ*PGFYVW
Trigger: CCACACATAGAACCCAGGTCACTGCTGGGGCGATTG...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGCACAGGTCGGGGGTCTaGTCTAAGTGCGATGGTCAC +
Preference number: 4 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRHRSGV*SKCDGH
Trigger: GTGACCATCGCACTTAGATCAGACCCCCGACCTGTG...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp AGGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGGAGCAGTCTGGACTCTaGCAGCCCCTGATTCAGGTG +
Preference number: 4 (lower is better)
Translates to: RQRGWVGGGLCYAVLDSGEQSGL*QPLIQV
Trigger: CACCTGAATCAGGGGCTGTCAGAGTCCAGACTGCTC...CCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGCTCATTGCAGCCTTaGACTCCTGGGCTCACTTGC +
Preference number: 4 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSSSLQP*TPGLTC
Trigger: GCAAGTGAGCCCAGGAGTTCAAGGCTGCAATGAGCT...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCTGGCTTGGCTCCCGTaGAAACACTGCAGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSLAWLP*KHCSGQ
Trigger: CTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAG...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAATCGTACAGGCCGTTTaGCGATGGGTTCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRIVQAV*RWVPQA
Trigger: AGCCTGGGGAACCCATCGGCAAACGGCCTGTACGAT...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCCCCAGATGGGCATCCTaGCATTTTCCTCGGACCTCA +
Preference number: 4 (lower is better)
Translates to: LSLATHSKRTPLPYSGGAPRWAS*HFPRTS
Trigger: TGAGGTCCGAGGAAAATGGCAGGATGCCCATCTGGG...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTAATCCCTCTGGTCCTTaGCCAGATGGGCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: QAQGRCCALYCHLELPWINPSGP*PDGHPA
Trigger: GGCAGGATGCCCATCTGGGCAAGGACCAGAGGGATT...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAAATCCCTCTGGTCCTTaGCCAGATGGGCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: GREVGWVEDYATLYLTQGNPSGP*PDGHPA
Trigger: GGCAGGATGCCCATCTGGGCAAGGACCAGAGGGATT...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGCCTTTGGCTCCCGACTaGACCATCATCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGPLAPD*TIICRL
Trigger: CAGCCTGCAGATGATGGTGCAGTCGGGAGCCAAAGG...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GGAGGGGCAAGGATGAGCAACTCTGTCACTTTCCAGGTGAAGCTGGCCCAGCTCCAGGCCCTCTCGTCCTaGCATGCAGTGGAAGAAGAA +
Preference number: 4 (lower is better)
Translates to: GGARMSNSVTFQVKLAQLQALSS*HAVEEE
Trigger: TTCTTCTTCCACTGCATGGCAGGACGAGAGGGCCTG...GAGCTGGGCCAGCTTCACCTGGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGCGCTGCCACTTCAGCTaGAGCAAGGTCCTCAACCTG +
Preference number: 4 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGRCHFS*SKVLNL
Trigger: CAGGTTGAGGACCTTGCTGCAGCTGAAGTGGCAGCG...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGCGTTCATCTCGCCTCTaGCTGCAAAGTGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLRSSRL*LQSGRC
Trigger: ACACCTTCCACTTTGCAGGCAGAGGCGAGATGAACG...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGCCAAGGTCGCTGCTGTaGTCTGTACTGTCACTTGGA +
Preference number: 4 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLPRSLL*SVLSLG
Trigger: TCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGG...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AGGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGCAGGCCCAAGGTCGCTaGTGTGCTCTGTACTGTCAC +
Preference number: 4 (lower is better)
Translates to: RQRGWVGGGLCYAVLDSGQAQGR*CALYCH
Trigger: GTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG...CCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGGTGGGTGGAGGACTATaGTACGCTGTACTTGACTCA +
Preference number: 4 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQVGGGL*YAVLDS
Trigger: TGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCAC...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGTCTGCCATCTTAAGCTaGCAAGGCCACTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLSAILS*QGHSQR
Trigger: CCTCTGAGAGTGGCCTTGGCAGCTTAAGATGGCAGA...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGTCGGGAGATGGAGGTTaGAGTGGAGCCGAGATTGCG +
Preference number: 4 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQSGDGG*SGAEIA
Trigger: CGCAATCTCGGCTCCACTGCAACCTCCATCTCCCGA...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTACAAATGGCCTCGCTTaGTGTGCTGGGCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QAQGRCCALYCHLELPWITNGLA*CAGLAE
Trigger: CTCTGCCAGCCCAGCACAGCAAGCGAGGCCATTTGT...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCAGATTCAACGTGCGCTTaGGCGCGGAAGCGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQADSTCA*ARKRSQ
Trigger: CTGCGACCGCTTCCGCGCGCAAGCGCACGTTGAATC...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409681.1
CDS-3UTR CCA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTGCCAGGGCATGTTCTTaGAGATCAACATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGARACS*RSTSSR
Trigger: CCTGGAGGATGTTGATCTCCAAGAACATGCCCTGGC...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCTGCAGCACAGGTGAGGTTTACATGTGCGCCCTaGGACCCCAGGAGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: QDFSLGVMPQRPPAAQVRFTCAP*DPRRLF
Trigger: GAACAACCTCCTGGGGTCCCAGGGCGCACATGTAAA...CCTCACCTGTGCTGCAGGAGGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AACTTGCTGTTGTGTTCCTTTCGGACAACGGATCGCCCGGTCTTGCAGTGGGGAGGCTCAGAGTCCTTCTaGCCAGCTGTCCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: NLLLCSFRTTDRPVLQWGGSESF*PAVLCT
Trigger: GGTGCACAGGACAGCTGGCCAGAAGGACTCTGAGCC...TCCCCACTGCAAGACCGGGCGATCCGTTGTCCGAAAGGAACACAACAGCAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409024.3
CDS-3UTR CCA 90 bp CCTCAATTCCCAGGGGCTCAGAGTCCTTCTGGCCAGCTGTCCTGTGCACCATGGGTTCGCGGGCACTGGTaGGTGTTAAGTATCCTCGTT +
Preference number: 4 (lower is better)
Translates to: PQFPGAQSPSGQLSCAPWVRGHW*VLSILV
Trigger: AACGAGGATACTTAACACCCACCAGTGCCCGCGAAC...CCATGGTGCACAGGACAGCTGGCCAGAAGGACTCTGAGCCCCTGGGAATTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR CCA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTTTCCTGAACATTCCATaGGGTAACTGGCTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGFLNIP*GNWLWV
Trigger: TACCCACAGCCAGTTACCCCATGGAATGTTCAGGAA...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGGACCATGGAGGCTCCTaGGTGCACATTAGGGCCGTT +
Preference number: 4 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQDHGGS*VHIRAV
Trigger: AACGGCCCTAATGTGCACCCAGGAGCCTCCATGGTC...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCAAGGTGCCCCCGTGGCTaGGGTCAGAAGCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: EDGELACLGQKTTSSVRARCPRG*GQKLLG
Trigger: GCCAAGCAGCTTCTGACCCCAGCCACGGGGGCACCT...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGGGTCTGTGCAGTGTaGGCTGTCGGTTCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSRVCAV*AVGSVA
Trigger: TGCTACTGAACCGACAGCCCACACTGCACAGACCCT...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGTATAGGCCTTGCAGTTaGCATAGTGGAGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQYRPCS*HSGAAA
Trigger: TGCTGCGGCTCCACTATGCCAACTGCAAGGCCTATA...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGCGGCCCAGCTCACTCTaGGGGAAATGGGCATTCATC +
Preference number: 4 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQRPSSL*GKWAFI
Trigger: GATGAATGCCCATTTCCCCCAGAGTGAGCTGGGCCG...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGTCCCTGATGATCACCTaGGACTCGCACATCGAGTCA +
Preference number: 4 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQSLMIT*DSHIES
Trigger: TGACTCGATGTGCGAGTCCCAGGTGATCATCAGGGA...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGTTAGAACCTTGCCGCTaGTCTCGCCTCCATAGATCT +
Preference number: 4 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQLEPCR*SRLHRS
Trigger: AGATCTATGGAGGCGAGACCAGCGGCAAGGTTCTAA...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGTGGTCCTTGCCCAGATaGGCATCCTGCCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQWSLPR*ASCHFP
Trigger: AGGAAAATGGCAGGATGCCCATCTGGGCAAGGACCA...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGCGTCCTGCCATGCAGTaGAAGAAGAACTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQRPAMQ*KKNSGG
Trigger: ACCTCCTGAGTTCTTCTTCCACTGCATGGCAGGACG...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGGATAGCCTGAGCGGCTaGTTTTCACAGCAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLDSLSG*FSQQCP
Trigger: TGGACACTGCTGTGAAAACCAGCCGCTCAGGCTATC...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCGCAGGAACTGTGTCTTaGGGATGTCCAGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: LSLATHSKRTPLPYSGGAAGTVS*GCPGHP
Trigger: AGGATGGCCTGGACATCCCCAAGACACAGTTCCTGC...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCGCGGCCGCCTTCTTCTaGTATTTCCTTCGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSAAAFF*YFLRLS
Trigger: GGAAAGCCGAAGGAAATACCAGAAGAAGGCGGCCGC...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCGCCAGACAGACAGACTaGGGTCAGGACAAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSARQTD*GQDKRP
Trigger: CGGCCGCTTGTCCTGACCCCAGTCTGTCTGTCTGGC...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AGGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGCGAGCACCTTCCCTGTaGGGATTTCGTTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RQRGWVGGGLCYAVLDSGRAPSL*GFRSSC
Trigger: GCAGGAGGAACGAAATCCCCACAGGGAAGGTGCTCG...CCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGTCATCTATGAACGGGTaGATCTCACGCACAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLSSMNG*ISRTAW
Trigger: CCAGGCTGTGCGTGAGATCCACCCGTTCATAGATGA...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGGCGTGGATGTCGTTaGAGTAGAGGCGGCGCAGAT +
Preference number: 4 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRWRGCR*SRGGAD
Trigger: ATCTGCGCCGCCTCTACTCCAACGACATCCACGCCA...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGATTGGAGCTGGGCAGATaGTGCCGGGGTAGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRLELGR*CRGSCY
Trigger: ATAGCAGCTACCCCGGCACCATCTGCCCAGCTCCAA...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AGGAATCTTGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTATGCAGAAGGCAGGCTaGGCCACGCCCTCACCAAGG +
Preference number: 4 (lower is better)
Translates to: RNLVCCPWPLTAKEPRFPMQKAG*ATPSPR
Trigger: CCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCAT...AGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTTCTGCCCCCAGGGGCTaGAGCAGCCGGAAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: AQCLAQNAASLLNHILEVSAPRG*SSRKEQ
Trigger: CTGCTCCTTCCGGCTGCTCCAGCCCCTGGGGGCAGA...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTGCCTTGGGGCTGATGTaGTCTAGAAGGACACCTCGC +
Preference number: 4 (lower is better)
Translates to: QAQGRCCALYCHLELPWIALGLM*SRRTPR
Trigger: GCGAGGTGTCCTTCTAGACCACATCAGCCCCAAGGC...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AGGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGGCCCCAGCAGTGACCTaGGTTCTATGTGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: RQRGWVGGGLCYAVLDSGAPAVT*VLCVGV
Trigger: CACTCCCACACATAGAACCCAGGTCACTGCTGGGGC...CCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAAGGAGGGAGAGGAAACGTaGACGGCCAAGAACAGGGCG +
Preference number: 4 (lower is better)
Translates to: QRGWVGGGLCYAVLDSGKEGEET*TAKNRA
Trigger: CGCCCTGTTCTTGGCCGTCCACGTTTCCTCTCCCTC...CTTCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCAGGTATCTGTCGGCTaGGACAAACCTCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: QAQGRCCALYCHLELPWIQVSVG*DKPPRP
Trigger: TGGCCTGGGAGGTTTGTCCCAGCCGACAGATACCTG...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CAA 72 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTaGGAACTGCCCTGGATTCCAGTCTCCTGGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QAQGRCCALYCH*ELPWIPVSWSS
Trigger: AGAGGACCAGGAGACTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR CAA 72 bp CCCAGTGTAGGCCTAGGAGGTGCAGGCTGGGTCCTATaGCATGGATGTAGGGAGCAACATGGTCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: PSVGLGGAGWVL*HGCREQHGHSP
Trigger: GGGAGAGTGACCATGTTGCTCCCTACATCCATGCAATAGGACCCAGCCTGCACCTCCTAGGCCTACACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CAA 72 bp CGGCTGGGACAAACCTCCCAGGCCATTGAGTCCAACTaGCGCGAAGATAGTCACTGGGGAGCTGCAGTGACA +
Preference number: 4 (lower is better)
Translates to: RLGQTSQAIESN*REDSHWGAAVT
Trigger: TGTCACTGCAGCTCCCCAGTGACTATCTTCGCGCAAGTTGGACTCAATGGCCTGGGAGGTTTGTCCCAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CAA 72 bp ACTGTGGTCCAGCTGAGGACTGTGGTGTCTGAAACTTaGTCACATGGGAGGCTACAGGCCCGGGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: TVVQLRTVVSET*SHGRLQARGWL
Trigger: AAGCCAGCCCCGGGCCTGTAGCCTCCCATGTGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGCCTCCAGGTCCGTTTTaGATTCCGACACCCCAAGAG +
Preference number: 4 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQPPGPF*IPTPQE
Trigger: CTCTTGGGGTGTCGGAATTCAAAACGGACCTGGAGG...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCGAGGGTTATACACTGTaGGTGGGAGCTCAATGTGGC +
Preference number: 4 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSEGYTL*VGAQCG
Trigger: GCCACATTGAGCTCCCACTCACAGTGTATAACCCTC...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCAGGTCTCCTAGGCGACTaGCTGGGCGATACCTTGAGG +
Preference number: 4 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQAGLLGD*LGDTLR
Trigger: CCTCAAGGTATCGCCCAGTCAGTCGCCTAGGAGACC...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGACACTGTCACGGACCGTaGGATCATACTGCACGACCA +
Preference number: 4 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRHCHGP*DHTARP
Trigger: TGGTCGTGCAGTATGATCTCACGGTCCGTGACAGTG...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGGCCTCCACACCAAACTaGCAGCAGAGAAAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PVGCMGQNIGLHTKLTAEASTPN*QQRKAR
Trigger: CCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGC...CTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTGTTAATTACCCGCCCTaGGCTGAAATAACAGTAGAC +
Preference number: 4 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGVNYPP*AEITVD
Trigger: GTCTACTGTTATTTCAGCTCAGGGCGGGTAATTAAC...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CTGCTTTCAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTAAGGCCACCACAGTaGGTCCCTGCTCATCAGGAT +
Preference number: 4 (lower is better)
Translates to: LLSGPRSLLCSVLSLGTALRPPQ*VPAHQD
Trigger: ATCCTGATGAGCAGGGACTCACTGTGGTGGCCTTAG...GGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGGTCCCAACATCTGATTaGAACACAGCCCACACCAAA +
Preference number: 4 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQVPTSD*NTAHTK
Trigger: TTTGGTGTGGGCTGTGTTTCAATCAGATGTTGGGAC...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTCACTGTGACTGGAACTaGATAGCCACACCTATATCA +
Preference number: 4 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGHCDWN*IATPIS
Trigger: TGATATAGGTGTGGCTATTCAGTTCCAGTCACAGTG...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTTCCCCATTCTTCACATaGCGGCACACAATTTTTGTC +
Preference number: 4 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGSPFFT*RHTIFV
Trigger: GACAAAAATTGTGTGCCGGCATGTGAAGAATGGGGA...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AGGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGCCCAGATGGGCATCCTaGCATTTTCCTCGGACCTCA +
Preference number: 4 (lower is better)
Translates to: RQRGWVGGGLCYAVLDSGPRWAS*HFPRTS
Trigger: TGAGGTCCGAGGAAAATGGCAGGATGCCCATCTGGG...CCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCGACTGCACCATCATCTaGAGGCTGTTCTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: LSLATHSKRTPLPYSGGADCTII*RLFSGN
Trigger: GTTCCCAGAGAACAGCCTGCAGATGATGGTGCAGTC...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCAAGCAGGGCAGTGACTTaGCAGACGCCATCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: EDGELACLGQKTTSSVRASRAVT*QTPSAG
Trigger: CCCCGCTGATGGCGTCTGGCAAGTCACTGCCCTGCT...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp GGAGGGGCAAGGATGAGCAACTCTGTCACTTTCCAGGTGAAGCTGGCCCAGCTCACCAGCCCCTCTAGGTaGTTGATGATGCACCTTTGG +
Preference number: 4 (lower is better)
Translates to: GGARMSNSVTFQVKLAQLTSPSR*LMMHLW
Trigger: CCAAAGGTGCATCATCAAGCACCTAGAGGGGCTGGT...GAGCTGGGCCAGCTTCACCTGGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAACCGTGAGATCATACTaGACGACCAGCCCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: GREVGWVEDYATLYLTQGTVRSY*TTSPSR
Trigger: CCTAGAGGGGCTGGTCGTGCAGTATGATCTCACGGT...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCGGAACTGCACCACACTaGCGTCACTGTCACGGACCG +
Preference number: 4 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSGTAPH*RHCHGP
Trigger: CGGTCCGTGACAGTGACGGCAGTGTGGTGCAGTTCC...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGATCCCCATACAGGAACTaGACCACACTGCCGTCACTG +
Preference number: 4 (lower is better)
Translates to: GREVGWVEDYATLYLTQGSPYRN*TTLPSL
Trigger: CAGTGACGGCAGTGTGGTGCAGTTCCTGTATGGGGA...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCCAGGGCTGCGGCCATTaGGGTTTTCACTCTCAAGTT +
Preference number: 4 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSQGCGH*GFHSQV
Trigger: AACTTGAGAGTGAAAACCGCAATGGCCGCAGCCCTG...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTCACACAGTGAGCGCTaGCACTTCAGCTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRSHSER*HFSCSK
Trigger: CTTGCTGCAGCTGAAGTGGCAGCGCTCACTGTGTGA...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGTGGACGTCAATTTTCTaGAACACCTCCCCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLWTSIF*NTSPKH
Trigger: GTGCTTGGGGGAGGTGTTGCAGAAAATTGACGTCCA...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGACGGGTCCTCCTCAGTaGCTAAGCCCACCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRTGPPQ*LSPPLH
Trigger: ATGAAGAGGTGGGCTTAGGCACTGAGGAGGACCCGT...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCTCCTGGTCCTCTCATaGAGAAGGCAGGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSLLVLS*RRQAGP
Trigger: TGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAG...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AGGAATCTTGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTTGTGTGGGAGTGAACTaGTGCGGCCCTGGAGCGACT +
Preference number: 4 (lower is better)
Translates to: RNLVCCPWPLTAKEPRFPCVGVN*CGPGAT
Trigger: AGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACA...AGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCATTCCTCTGTGCCCATaGCTTGGTGAACCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSIPLCP*LGEPGR
Trigger: TCTGCCAGGTTCACCAAGGCATGGGCACAGAGGAAT...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGGGGGATGAGACAAGGTaGTTCACCCCTTCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQGDETR*FTPSSV
Trigger: AACCGAGGAAGGGGTGAAGCACCTTGTCTCATCCCC...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp ATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCCTGAGTCTCTTAAAGTaGTGGGACTGTAAGCGTGAG +
Preference number: 4 (lower is better)
Translates to: IPVSWSSHAEGRLGHALTLSLLK*WDCKRE
Trigger: CTCACGCTTACAGTCCCAGCACTTTAAGAGACTCAG...GGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GGGCTCAGAGTCCTTCTGGCCAGCTGTCCTGTGCACCATGGCTGGAAACGTGATGCCAGGGCATGTTCTTaGAGATCAACATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GLRVLLASCPVHHGWKRDARACS*RSTSSR
Trigger: CCTGGAGGATGTTGATCTCCAAGAACATGCCCTGGC...ATCACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCAGAAGGACTCTGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR CCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCGCCCGGTCTTGCAGTaGGGACAGCGCTTAGCATTC +
Preference number: 4 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSRPVLQ*GQRLAF
Trigger: GAATGCTAAGCGCTGTCCCCACTGCAAGACCGGGCG...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CTGGCCAGCTGTCCTGTGCACCATGGCTGGAAACGTGATAGTCAACTTGCTGTTCGCCCGGTCTTGCAGTaGGGACAGCGCTTAGCATTC +
Preference number: 4 (lower is better)
Translates to: LASCPVHHGWKRDSQLAVRPVLQ*GQRLAF
Trigger: GAATGCTAAGCGCTGTCCCCACTGCAAGACCGGGCG...AACAGCAAGTTGACTATCACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409024.3
CDS-3UTR CCA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGCCTGTGCACCATGGCTaGAAACGTGATAGTCAACTT +
Preference number: 4 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQPVHHG*KRDSQL
Trigger: AAGTTGACTATCACGTTTCCAGCCATGGTGCACAGG...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CTTCATTCTTCCACAGGGCAGAAAGGTGTTCGCGGGCACTGGTGGGTGTTAAGTGGCTCAGAGTCCTTCTaGCCAGCTGTCCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: LHSSTGQKGVRGHWWVLSGSESF*PAVLCT
Trigger: GGTGCACAGGACAGCTGGCCAGAAGGACTCTGAGCC...ACTTAACACCCACCAGTGCCCGCGAACACCTTTCTGCCCTGTGGAAGAATGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR CCA 90 bp GGCTCAGAGTCCTTCTGGCCAGCTGTCCTGTGCACCATGGCTGGAAACGTGATAGGTGTTCGCGGGCACTaGTGGGTGTTAAGTATCCTC +
Preference number: 4 (lower is better)
Translates to: GSESFWPAVLCTMAGNVIGVRGH*WVLSIL
Trigger: GAGGATACTTAACACCCACCAGTGCCCGCGAACACC...TATCACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCAGAAGGACTCTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR CCA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGAGTCCCGCCAATGGTTaGCCATCCTTGGGAACAAGG +
Preference number: 4 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGSPANG*PSLGTR
Trigger: CCTTGTTCCCAAGGATGGCCAACCATTGGCGGGACT...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GGAGGGGCAAGGATGAGCAACTCTGTCACTTTCCAGGTGAAGCTGGCCCAGCTCTCCCTGATGATCACCTaGGACTCGCACATCGAGTCA +
Preference number: 4 (lower is better)
Translates to: GGARMSNSVTFQVKLAQLSLMIT*DSHIES
Trigger: TGACTCGATGTGCGAGTCCCAGGTGATCATCAGGGA...GAGCTGGGCCAGCTTCACCTGGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGTTAGAACCTTGCCGCTaGTCTCGCCTCCATAGATCT +
Preference number: 4 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLLEPCR*SRLHRS
Trigger: AGATCTATGGAGGCGAGACCAGCGGCAAGGTTCTAA...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGTCACCTCGTAGTTGCTaGCCAGGAAGGGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGSPRSC*PGRGTA
Trigger: AGCAGTTCCCCTTCCTGGCCAGCAACTACGAGGTGA...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAATCTCCCGCAACCTTaGAATGCCCAGGGTGACGTT +
Preference number: 4 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSNLPQP*NAQGDV
Trigger: AACGTCACCCTGGGCATTCCAAGGTTGCGGGAGATT...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTCTCTGTACTGTCACTTaGAACTGCCCTGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGLCTVT*NCPGFQ
Trigger: CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAG...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGCCCAGCAGCAAAGCATaGCTTCCCCTTGGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PVGCMGQNIGLHTKLTAEPSSKA*LPLGLL
Trigger: GAGAAGACCAAGGGGAAGCCATGCTTTGCTGCTGGG...CTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGCCCAGCAGCAAAGCATaGCTTCCCCTTGGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQPSSKA*LPLGLL
Trigger: GAGAAGACCAAGGGGAAGCCATGCTTTGCTGCTGGG...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCCCCGCTTCCCTACTCTaGAGGTGCCTGGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEAPASLL*RCLGSP
Trigger: TGGGGACCCCAGGCACCTCCAGAGTAGGGAAGCGGG...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTGAGAGGTTGGGTGGGTaGAGGACTATGCTACGCTGT +
Preference number: 4 (lower is better)
Translates to: QAQGRCCALYCHLELPWIERLGG*RTMLRC
Trigger: ACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTC...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAGAGGTTGGGTGGGTaGAGGACTATGCTACGCTGT +
Preference number: 4 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRERLGG*RTMLRC
Trigger: ACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTC...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CTTACAGTCCTAAGAAGACTCCAAAGCCTCTGCCATCTTAAGCTGCCAAGGCCAGAACTGCTGCGGCCCTaGAGCGACTGCTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LTVLRRLQSLCHLKLPRPELLRP*SDCSQP
Trigger: AGGCTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTC...TGGCCTTGGCAGCTTAAGATGGCAGAGGCTTTGGAGTCTTCTTAGGACTGTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCTGCGCCCTCAGTGCCTaGGAGAGATGGAATCCACGG +
Preference number: 4 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSCALSA*ERWNPR
Trigger: CCGTGGATTCCATCTCTCCCAGGCACTGAGGGCGCA...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTGGGGTTTTGCCATGTTaGCCAGGGTGGTCTCGAATC +
Preference number: 4 (lower is better)
Translates to: QAQGRCCALYCHLELPWIGVLPC*PGWSRI
Trigger: GATTCGAGACCACCCTGGCCAACATGGCAAAACCCC...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp AAACTACACAACCTCAAGGGCAGGCTGTGGTACGGGGCTGCCCCACTGAGCCATCTGAGAGCCTCTAAGTaGACTTTGGACGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: KLHNLKGRLWYGAAPLSHLRASK*TLDGSG
Trigger: CCCACTTCCGTCCAAAGTCCACTTAGAGGCTCTCAG...ATGGCTCAGTGGGGCAGCCCCGTACCACAGCCTGCCCTTGAGGTTGTGTAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CCAGCTGTCCTGTGCACCATGGCTGGAAACGTGATAGTCAACTTGCTGTTGTGTCGGTCATGTGCGCCCTaGGACCCCAGGAGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: PAVLCTMAGNVIVNLLLCRSCAP*DPRRLF
Trigger: GAACAACCTCCTGGGGTCCCAGGGCGCACATGACCG...ACACAACAGCAAGTTGACTATCACGTTTCCAGCCATGGTGCACAGGACAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424089.5
3UTR CAA 72 bp CTCCACGTTCCTGCTCATCGGGAGCCCCCAGGAATCTaGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAAC +
Preference number: 4 (lower is better)
Translates to: LHVPAHREPPGI*SVVPGHSQQKN
Trigger: GTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCTGGGGGCTCCCGATGAGCAGGAACGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR CAA 72 bp CAGGTATCTGTCGGCTGGGACAAACCTCCCAGGCCATaGAGTCCAACTTGCGCGAAGATAGTCACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: QVSVGWDKPPRP*SPTCAKIVTGE
Trigger: CTCCCCAGTGACTATCTTCGCGCAAGTTGGACTCAATGGCCTGGGAGGTTTGTCCCAGCCGACAGATACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTGTTCCACTCACCACCTaGCTATTCTTAATTCAACCT +
Preference number: 4 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGVPLTT*LFLIQP
Trigger: AGGTTGAATTAAGAATAGTCAGGTGGTGAGTGGAAC...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCTGCAGCACAGGTGAGGCCTCGTTTTCCTATCTaGGCTTCCTCAATTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QDFSLGVMPQRPPAAQVRPRFPI*ASSIPR
Trigger: CCTGGGAATTGAGGAAGCTCAGATAGGAAAACGAGG...CCTCACCTGTGCTGCAGGAGGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCTGCAGCACAGGTGAGGGAACTACATCCTTCATaGCAGCCTGCAAGTTCACCG +
Preference number: 4 (lower is better)
Translates to: QDFSLGVMPQRPPAAQVRELHPS*QPASSP
Trigger: CGGTGAACTTGCAGGCTGTCATGAAGGATGTAGTTC...CCTCACCTGTGCTGCAGGAGGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCAACATGTCTGGGCAGATaGCTGAGCGCGCAGCGTAGT +
Preference number: 4 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQATCLGR*LSAQRS
Trigger: ACTACGCTGCGCGCTCAGTCATCTGCCCAGACATGT...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCAGTCATGCTTGCCCCTaGAACCATGTGATCCTGGAT +
Preference number: 4 (lower is better)
Translates to: LSLATHSKRTPLPYSGGASHACP*NHVILD
Trigger: ATCCAGGATCACATGGTTTCAGGGGCAAGCATGACT...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GGGAGAGGAAACGTGGACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGACTGGGATTATATTTATaGGCAGCGTTGACACAACCT +
Preference number: 4 (lower is better)
Translates to: GRGNVDGQEQGGTVLWAGLGLYL*AALTQP
Trigger: AGGTTGTGTCAACGCTGCTCATAAATATAATCCCAG...TCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGTCCACGTTTCCTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCCCCAGGCTTTCCCAGTaGTTTTCGCCTTTCCAGATA +
Preference number: 4 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSPRLSQ*FSPFQI
Trigger: TATCTGGAAAGGCGAAAATCACTGGGAAAGCCTGGG...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp AGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGCTCAAAGCAGGGCAGTaGCTTGCCAGACGCCATCAG +
Preference number: 4 (lower is better)
Translates to: REKPGNLFNRPSSDLGSMLKAGQ*LARRHQ
Trigger: CTGATGGCGTCTGGCAAGTCACTGCCCTGCTTTGAG...CATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCATCCTCAGCATCTCCTaGGTCCCAGGGCTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEAILSIS*VPGLRP
Trigger: TGGCCGCAGCCCTGGGACTCAGGAGATGCTGAGGAT...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GGAGGGGCAAGGATGAGCAACTCTGTCACTTTCCAGGTGAAGCTGGCCCAGCTCACTGGTAGTCATCTATaGACGGGTGGATCTCACGCA +
Preference number: 4 (lower is better)
Translates to: GGARMSNSVTFQVKLAQLTGSHL*TGGSHA
Trigger: TGCGTGAGATCCACCCGTTCATAGATGACTACCAGT...GAGCTGGGCCAGCTTCACCTGGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGACGGCAAACACATCCTTaGTCTCCTTCTCGATCACCC +
Preference number: 4 (lower is better)
Translates to: GREVGWVEDYATLYLTQGRQTHP*SPSRSP
Trigger: GGGTGATCGAGAAGGAGATCAAGGATGTGTTTGCCG...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGGGTATCACTCAACGATaGAAGACTCAACGAACCAGC +
Preference number: 4 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQGITQR*KTQRTS
Trigger: GCTGGTTCGTTGAGTCTTTCATCGTTGAGTGATACC...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCTGCAGCACAGGTGAGGAAGTGGGGTGGAGGTTaGTGGTGTAGGAACTTTGGA +
Preference number: 4 (lower is better)
Translates to: QDFSLGVMPQRPPAAQVRKWGGG*WCRNFG
Trigger: TCCAAAGTTCCTACACCATCAACCTCCACCCCACTT...CCTCACCTGTGCTGCAGGAGGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGACTCCTAAGCTCAAGTaGTCCTCCTGCCTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQTPKLK*SSCLSL
Trigger: GAGACTCAGGCAGGAGGATCACTTGAGCTTAGGAGT...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGTCCTTCATGACAGCCTaGAAGTTCACCGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGSFMTA*KFTVWP
Trigger: TGGCCAGACGGTGAACTTGCAGGCTGTCATGAAGGA...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GGGAGAGGAAACGTGGACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGATTCTTGGGCCATCAATaGCAGAAGTTTTCGAATCAG +
Preference number: 4 (lower is better)
Translates to: GRGNVDGQEQGGTVLWAGFLGHQ*QKFSNQ
Trigger: CTGATTCGAAAACTTCTGGCATTGATGGCCCAAGAA...TCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGTCCACGTTTCCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGTTCTTCTCCAGGATCTaGCTAATGCCTGGGTACTTG +
Preference number: 4 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQFFSRI*LMPGYL
Trigger: CAAGTACCCAGGCATTAGGCAGATCCTGGAGAAGAA...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp ATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCTCCCCATTCTTCACATaGCGGCACACAATTTTTGTC +
Preference number: 4 (lower is better)
Translates to: IPVSWSSHAEGRLGHALTSPFFT*RHTIFV
Trigger: GACAAAAATTGTGTGCCGGCATGTGAAGAATGGGGA...GGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CTTTTCTGTCCATGCCAGGGAAATGTATTGCTGGTGCTAGAGGGAGAGGAAACGTCTCTTCAGGCAGGATaGGGGCACGGTGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LFCPCQGNVLLVLEGEETSLQAG*GHGGPG
Trigger: TCCAGGCCCACCGTGCCCGCATCCTGCCTGAAGAGA...CGTTTCCTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCATGGACAGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CTTTTCTGTCCATGCCAGGGAAATGTATTGCTGGTGCTAGAGGGAGAGGAAACGAGCAGGGCAGTGACTTaGCAGACGCCATCAGCGGGG +
Preference number: 4 (lower is better)
Translates to: LFCPCQGNVLLVLEGEETSRAVT*QTPSAG
Trigger: CCCCGCTGATGGCGTCTGGCAAGTCACTGCCCTGCT...CGTTTCCTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCATGGACAGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGCATCTCGCCTCTGCCTaGAAAGTGGAAGGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: PVGCMGQNIGLHTKLTAEHLASA*KVEGVE
Trigger: CTCAACACCTTCCACTTTGCAGGCAGAGGCGAGATG...CTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CTGCTTTCAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCTCAACCTCCTCCTCCTaGTTCTCCTTGCGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LLSGPRSLLCSVLSLGTASTSSS*FSLRLA
Trigger: TGCCAAACGCAAGGAGAAGCAGGAGGAGGAGGTTGA...GGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTTCAACCTCCTCCTCCTaGTTCTCCTTGCGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: QAQGRCCALYCHLELPWISTSSS*FSLRLA
Trigger: TGCCAAACGCAAGGAGAAGCAGGAGGAGGAGGTTGA...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCCCCACCTCTTCATCTTaGTCTTGGGTCTTTCGAGCA +
Preference number: 4 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSPTSSS*SWVFRA
Trigger: TGCTCGAAAGACCCAAGAGCAAGATGAAGAGGTGGG...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGCCCAGCATGGTGGCTTaGTTCAGAAACTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQPSMVA*FRNWKL
Trigger: CAGCTTCCAGTTTCTGAAGCAAGCCACCATGCTGGG...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AGGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGTGCTATCTCAGAGGCTaGTTGAGCTCGAACAGGCCT +
Preference number: 4 (lower is better)
Translates to: RQRGWVGGGLCYAVLDSGCYLRG*LSSNRP
Trigger: AGGCCTGTTCGAGCTCAAGCAGCCTCTGAGATAGCA...CCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AGGAATCTTGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTTGGTGCCGGGGTAGCTaGTATCTCAGAGGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RNLVCCPWPLTAKEPRFPWCRGS*YLRGCL
Trigger: CAAGCAGCCTCTGAGATAGCAGCTACCCCGGCACCA...AGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCCTACTCTGGAGGTaGCTGGGGTCCCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEASLLWR*LGSPAA
Trigger: TGCTGCTGGGGACCCCAGGCACCTCCAGAGTAGGGA...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGAATCCACGGACCCTGTaGCACAGTCACCAGGTTACT +
Preference number: 4 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQNPRTL*HSHQVT
Trigger: AGTAACCTGGTGACTGTGGCACAGGGTCCGTGGATT...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTACCACAGTGAGTCCCTaGTCATCAGGATGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: QAQGRCCALYCHLELPWITTVSP*SSGCAS
Trigger: GCTTGCACATCCTGATGAGCAGGGACTCACTGTGGT...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCAACTCCTGGGCTCACTTaGTCCTCTCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQATPGLT*SSHLSL
Trigger: GAGGCTGAGGTGAGAGGAGCAAGTGAGCCCAGGAGT...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCGTAGGACAGCGATGCTaGTTAAAGAACTTAAGGAAC +
Preference number: 4 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSVGQRC*LKNLRN
Trigger: GTTCCTTAAGTTCTTTAAGCAGCATCGCTGTCCTAC...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp AGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGGCTGTGAGCCGTGATTaGAACCCTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: REKPGNLFNRPSSDLGSMAVSRD*NPALQP
Trigger: AGGCTGGAGTGCAGGGTTGCAATCACGGCTCACAGC...CATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTGCCAGGGCATGTTCTTaGAGATCAACATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QAQGRCCALYCHLELPWIARACS*RSTSSR
Trigger: CCTGGAGGATGTTGATCTCCAAGAACATGCCCTGGC...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CAGGGGCTCAGAGTCCTTCTGGCCAGCTGTCCTGTGCACCATGGCTGGAAACGTCCTGTGCACCATGGCTaGAAACGTGATAGTCAACTT +
Preference number: 4 (lower is better)
Translates to: QGLRVLLASCPVHHGWKRPVHHG*KRDSQL
Trigger: AAGTTGACTATCACGTTTCCAGCCATGGTGCACAGG...ACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCAGAAGGACTCTGAGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR CCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCAGGCTCAGAGTCCTTCTaGCCAGCTGTCCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: EDGELACLGQKTTSSVRAGSESF*PAVLCT
Trigger: GGTGCACAGGACAGCTGGCCAGAAGGACTCTGAGCC...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGGTTCGCGGGCACTGGTaGGTGTTAAGTATCCTCGTT +
Preference number: 4 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRVRGHW*VLSILV
Trigger: AACGAGGATACTTAACACCCACCAGTGCCCGCGAAC...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGATGTGGCCACTTCCTCTaGCAACTTCTGTTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRCGHFL*QLLFLG
Trigger: GCCCAAGAACAGAAGTTGCCAGAGGAAGTGGCCACA...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGTGTGGCCACTTCCTCTaGCAACTTCTGTTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGCGHFL*QLLFLG
Trigger: GCCCAAGAACAGAAGTTGCCAGAGGAAGTGGCCACA...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGTATGAGGGACTGGCCTaGAAGTGTACTCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQYEGLA*KCTQKG
Trigger: TCCTTTTTGAGTACACTTCCAGGCCAGTCCCTCATA...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp ATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCGGTAGGTCAGTTTTGTaGCAAACACCATGGGAATTC +
Preference number: 4 (lower is better)
Translates to: IPVSWSSHAEGRLGHALTGRSVL*QTPWEF
Trigger: GAATTCCCATGGTGTTTGCCACAAAACTGACCTACC...GGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GGGAGAGGAAACGTGGACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGACTTGACATCTGCCTTTaGCTTCACCAAAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: GRGNVDGQEQGGTVLWAGLDICL*LHQNVF
Trigger: GAAGACATTTTGGTGAAGCCAAAGGCAGATGTCAAG...TCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGTCCACGTTTCCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GTAAACCTTGATAAAAATCCAGAGACAGGGAGGGGCAAGGATGAGCAACTCTGTGCAGCCCTGACAGCCTaGGGCCCGCAGTGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: VNLDKNPETGRGKDEQLCAALTA*GPQWVD
Trigger: ATCCACCCACTGCGGGCCCCAGGCTGTCAGGGCTGC...ACAGAGTTGCTCATCCTTGCCCCTCCCTGTCTCTGGATTTTTATCAAGGTTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGTGGTCCTTGCCCAGATaGGCATCCTGCCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: PVGCMGQNIGLHTKLTAEWSLPR*ASCHFP
Trigger: AGGAAAATGGCAGGATGCCCATCTGGGCAAGGACCA...CTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAAGGCGGCCGCCTTCTTCTaGTATTTCCTTCGGCTTTCC +
Preference number: 4 (lower is better)
Translates to: QRGWVGGGLCYAVLDSGKAAAFF*YFLRLS
Trigger: GGAAAGCCGAAGGAAATACCAGAAGAAGGCGGCCGC...CTTCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCGCCAGACAGACAGACTaGGGTCAGGACAAGCGGCCG +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEAARQTD*GQDKRP
Trigger: CGGCCGCTTGTCCTGACCCCAGTCTGTCTGTCTGGC...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CTGCTTTCAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCAATCTCCCGCAACCTTaGAATGCCCAGGGTGACGTT +
Preference number: 4 (lower is better)
Translates to: LLSGPRSLLCSVLSLGTANLPQP*NAQGDV
Trigger: AACGTCACCCTGGGCATTCCAAGGTTGCGGGAGATT...GGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTTCTTCATCTTGCTCTTaGGTCTTTCGAGCACCTTCC +
Preference number: 4 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGSSSCS*VFRAPS
Trigger: GGAAGGTGCTCGAAAGACCCAAGAGCAAGATGAAGA...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AGGAATCTTGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTTGGCGTGGATGTCGTTaGAGTAGAGGCGGCGCAGAT +
Preference number: 4 (lower is better)
Translates to: RNLVCCPWPLTAKEPRFPWRGCR*SRGGAD
Trigger: ATCTGCGCCGCCTCTACTCCAACGACATCCACGCCA...AGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCTGCAGCACAGGTGAGGCATACGTGTTGGCTATaGCGTGGATGTCGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: QDFSLGVMPQRPPAAQVRHTCWL*RGCRWS
Trigger: ACTCCAACGACATCCACGCCATAGCCAACACGTATG...CCTCACCTGTGCTGCAGGAGGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCGCAACCAGGGAGAGATaGCGAGGGTCGACCGCGATG +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEAATRER*RGSTAM
Trigger: CATCGCGGTCGACCCTCGCCATCTCTCCCTGGTTGC...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCACTCACCAAGGGTCCTTaGAGCTGGGCAGATGGTGCC +
Preference number: 4 (lower is better)
Translates to: EDGELACLGQKTTSSVRALTKGP*SWADGA
Trigger: GGCACCATCTGCCCAGCTCCAAGGACCCTTGGTGAG...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCGCCTTGGGGCTGATGTaGTCTAGAAGGACACCTCGC +
Preference number: 4 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSALGLM*SRRTPR
Trigger: GCGAGGTGTCCTTCTAGACCACATCAGCCCCAAGGC...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGAACGTAGAACAGTaGTTGCCAGGGGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSQNVEQ*LPGAGE
Trigger: CTCCCCAGCCCCTGGCAACCACTGTTCTACGTTCTG...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGACTCTGTTGCCCAGGCTaGAGTGACATAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GREVGWVEDYATLYLTQGLCCPG*SDIISA
Trigger: AGCCGAGATTATGTCACTCCAGCCTGGGCAACAGAG...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGAGTCTCTTAAAGTGCTaGGACTGTAAGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLSLLKC*DCKREP
Trigger: TGGCTCACGCTTACAGTCCCAGCACTTTAAGAGACT...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGGTGCCTGGGACACAGTaGAGATCAAGGTTGGATGGA +
Preference number: 4 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGVPGTQ*RSRLDG
Trigger: TCCATCCAACCTTGATCTCCACTGTGTCCCAGGCAC...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CTTACAGTCCTAAGAAGACTCCAAAGCCTCTGCCATCTTAAGCTGCCAAGGCCAGCCCAGAACAGTTGCTaGAGTCCTGCACGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LTVLRRLQSLCHLKLPRPAQNSC*SPARRW
Trigger: CCACCTGCGTGCAGGACTTCAGCAACTGTTCTGGGC...TGGCCTTGGCAGCTTAAGATGGCAGAGGCTTTGGAGTCTTCTTAGGACTGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CTGCTTTCAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCCTCGTTTTCCTATCTaGGCTTCCTCAATTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LLSGPRSLLCSVLSLGTAPRFPI*ASSIPR
Trigger: CCTGGGAATTGAGGAAGCTCAGATAGGAAAACGAGG...GGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCGCTTGCCTAAGTTCCTaGACATTCCATGGGGTAACT +
Preference number: 4 (lower is better)
Translates to: LSLATHSKRTPLPYSGGAACLSS*TFHGVT
Trigger: AGTTACCCCATGGAATGTTCAGGAACTTAGGCAAGC...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTGCCCCACTTTGTCCGTaGGTCCTCGGTACACCAGCT +
Preference number: 4 (lower is better)
Translates to: AQCLAQNAASLLNHILEVAPLCP*VLGTPA
Trigger: AGCTGGTGTACCGAGGACTCACGGACAAAGTGGGGC...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp AGGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGCCCAGGCTTTCCCAGTaGTTTTCGCCTTTCCAGATA +
Preference number: 4 (lower is better)
Translates to: RQRGWVGGGLCYAVLDSGPRLSQ*FSPFQI
Trigger: TATCTGGAAAGGCGAAAATCACTGGGAAAGCCTGGG...CCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp AGGAATCTTGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTAGGGAGGGGCAAGGATaGGCAACTCTGTCACTTTCC +
Preference number: 4 (lower is better)
Translates to: RNLVCCPWPLTAKEPRFPREGQG*ATLSLS
Trigger: GGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCCCT...AGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCAGGGAGGGGCAAGGATaGGCAACTCTGTCACTTTCC +
Preference number: 4 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSREGQG*ATLSLS
Trigger: GGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCCCT...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCCCTTGGTCTTCTCAGTaGATCGTGAATCAGGACTTC +
Preference number: 4 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSPWSSQ*IVNQDF
Trigger: GAAGTCCTGATTCACGATTCACTGAGAAGACCAAGG...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CTGCTTTCAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCTCAGGGAAGAAGTCTTaGTGGGGACTCTTTGTGGAC +
Preference number: 4 (lower is better)
Translates to: LLSGPRSLLCSVLSLGTASGKKS*WGLFVD
Trigger: GTCCACAAAGAGTCCCCATCAAGACTTCTTCCCTGA...GGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGTTACCCGCCCTGAGCTaGAATAACAGTAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQLPALS*NNSRQR
Trigger: TCTTTGTCTACTGTTATTTCAGCTCAGGGCGGGTAA...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CTTACAGTCCTAAGAAGACTCCAAAGCCTCTGCCATCTTAAGCTGCCAAGGCCAGTGCCCATGCCTTGGTaGACCTGGCAGACCCCGTTA +
Preference number: 4 (lower is better)
Translates to: LTVLRRLQSLCHLKLPRPVPMPW*TWQTPL
Trigger: TAACGGGGTCTGCCAGGTTCACCAAGGCATGGGCAC...TGGCCTTGGCAGCTTAAGATGGCAGAGGCTTTGGAGTCTTCTTAGGACTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp AAACTACACAACCTCAAGGGCAGGCTGTGGTACGGGGCTGCCCCACTGAGCCATCACCAGGTTACTTTGTaGTCTCCTTCAAGGACACTC +
Preference number: 4 (lower is better)
Translates to: KLHNLKGRLWYGAAPLSHHQVTL*SPSRTL
Trigger: GAGTGTCCTTGAAGGAGATCACAAAGTAACCTGGTG...ATGGCTCAGTGGGGCAGCCCCGTACCACAGCCTGCCCTTGAGGTTGTGTAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTTCCATCCATCAGATTTaGCTTGGGCCTACTTTCCAA +
Preference number: 4 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGSIHQI*LGPTFQ
Trigger: TTGGAAAGTAGGCCCAAGTCAAATCTGATGGATGGA...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAAAGGGTCCCAACATCTaGTTGAAACACAGCCCACAC +
Preference number: 4 (lower is better)
Translates to: GREVGWVEDYATLYLTQGKGPNI*LKHSPH
Trigger: GTGTGGGCTGTGTTTCAATCAGATGTTGGGACCCTT...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCGACTCTGACAGCCCCTaGTTCAGGTGCAAACTAAAA +
Preference number: 4 (lower is better)
Translates to: LSLATHSKRTPLPYSGGADSDSP*FRCKLK
Trigger: TTTTAGTTTGCACCTGAATCAGGGGCTGTCAGAGTC...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp AGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGAGACTACAAGTTCTGTaGGGGCAGGGCCCACATAGC +
Preference number: 4 (lower is better)
Translates to: REKPGNLFNRPSSDLGSMRLQVL*GQGPHS
Trigger: GCTATGTGGGCCCTGCCCTCACAGAACTTGTAGTCT...CATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGGAGGACTGTGGTGTCTaGAACTTTGTCACATGGGAG +
Preference number: 4 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQEDCGV*NFVTWE
Trigger: CTCCCATGTGACAAAGTTTCAGACACCACAGTCCTC...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGACACATTCTTGAGGTTTaGTTGGCTGAACGCACGTGG +
Preference number: 4 (lower is better)
Translates to: GREVGWVEDYATLYLTQGHILEV*LAERTW
Trigger: CCACGTGCGTTCAGCCAATCAAACCTCAAGAATGTG...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGGGTCCCACTGTAAGTTaGGGGCTTGAGATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQGPTVS*GLEIPR
Trigger: TCTTGGAATCTCAAGCCCTCAACTTACAGTGGGACC...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTTCTTCTCCAGGATCTaGCTAATGCCTGGGTACTTG +
Preference number: 4 (lower is better)
Translates to: LSLATHSKRTPLPYSGGAFFSRI*LMPGYL
Trigger: CAAGTACCCAGGCATTAGGCAGATCCTGGAGAAGAA...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCATGGAGGCTCCTGGGTaGACATTAGGGCCGTTGATG +
Preference number: 4 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSMEAPG*TLGPLM
Trigger: CATCAACGGCCCTAATGTGCACCCAGGAGCCTCCAT...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCAACCGTGAGATCATACTaGACGACCAGCCCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQATVRSY*TTSPSR
Trigger: CCTAGAGGGGCTGGTCGTGCAGTATGATCTCACGGT...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCGGAACTGCACCACACTaGCGTCACTGTCACGGACCG +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEAGTAPH*RHCHGP
Trigger: CGGTCCGTGACAGTGACGGCAGTGTGGTGCAGTTCC...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGCTCCTGCTGGTAATATaGATGTGGCAGGAACTGAAA +
Preference number: 4 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLLLLVI*MWQELK
Trigger: TTTCAGTTCCTGCCACATGCATATTACCAGCAGGAG...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTCTCCTGCTGGTAATATaGATGTGGCAGGAACTGAAA +
Preference number: 4 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGLLLVI*MWQELK
Trigger: TTTCAGTTCCTGCCACATGCATATTACCAGCAGGAG...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTTCAGCATCCACAATGTaGCCCTCCTCTTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: QAQGRCCALYCHLELPWISASTM*PSSSSS
Trigger: TGATGAGGAAGAGGAGGGGCACATTGTGGATGCTGA...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp TTCATGTTTCCAAGCAAGAATCATGGGTTGGGGAAGGCAAGTGTTTACTGTGGTGTGGGTTTCCGGGGCTaGGTCAGGAGGGCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: FMFPSKNHGLGKASVYCGVGFRG*VRRAGR
Trigger: CCTTCCCGCCCTCCTGACGCAGCCCCGGAAACCCAC...ACCACAGTAAACACTTGCCTTCCCCAACCCATGATTCTTGCTTGGAAACATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp AGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTGAAACTTTGTCAGTGGGAGTGAACTGCTaGGGCCCTGGAGCGACTGCT +
Preference number: 4 (lower is better)
Translates to: RQVFTVVQLRTVVSETLSVGVNC*GPGATA
Trigger: AGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCAC...TGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp GGAGGGGCAAGGATGAGCAACTCTGTCACTTTCCAGGTGAAGCTGGCCCAGCTCTGTCATATTCCTCTGTaGCCATGCCTTGGTGAACCT +
Preference number: 4 (lower is better)
Translates to: GGARMSNSVTFQVKLAQLCHIPL*PCLGEP
Trigger: AGGTTCACCAAGGCATGGGCACAGAGGAATATGACA...GAGCTGGGCCAGCTTCACCTGGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGTGGGCCCTTCCTGCCTaGCTCAAAACTGTCATATTC +
Preference number: 4 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGWALPA*LKTVIF
Trigger: GAATATGACAGTTTTGAGGCAGGCAGGAAGGGCCCA...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGGGCAATTCTGACACATaGTACAGCATGGATGAACCT +
Preference number: 4 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQGNSDT*YSMDEP
Trigger: AGGTTCATCCATGCTGTAGCATGTGTCAGAATTGCC...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCCTGCGGTGGGAGGGTTaGTTGGTCCTGGGACTTCGA +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEALRWEG*LVLGLR
Trigger: TCGAAGTCCCAGGACCAAGCAACCCTCCCACCGCAG...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCGCCTGGGGCCCGCAGTaGGTGGATTCTTCAATGATA +
Preference number: 4 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSAWGPQ*VDSSMI
Trigger: TATCATTGAAGAATCCACCCACTGCGGGCCCCAGGC...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGATCACAGTTGAACCTTTaGCTCCCGACTGCACCATCA +
Preference number: 4 (lower is better)
Translates to: GREVGWVEDYATLYLTQGSQLNL*LPTAPS
Trigger: TGATGGTGCAGTCGGGAGCCAAAGGTTCAACTGTGA...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGATCACAGTTGAACCTTTaGCTCCCGACTGCACCATCA +
Preference number: 4 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRSQLNL*LPTAPS
Trigger: TGATGGTGCAGTCGGGAGCCAAAGGTTCAACTGTGA...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGCCTTCCAGTTCAATCTaGCCCAGCAGGCACGAGATC +
Preference number: 4 (lower is better)
Translates to: REKPGNLFNRPSSDLGSMPSSSI*PSRHEI
Trigger: GATCTCGTGCCTGCTGGGCCAGATTGAACTGGAAGG...CATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AGGAATCTTGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTTCACCTCGTAGTTGCTaGCCAGGAAGGGGAACTGCT +
Preference number: 4 (lower is better)
Translates to: RNLVCCPWPLTAKEPRFPSPRSC*PGRGTA
Trigger: AGCAGTTCCCCTTCCTGGCCAGCAACTACGAGGTGA...AGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GTAAACCTTGATAAAAATCCAGAGACAGGGAGGGGCAAGGATGAGCAACTCTGTGGCTCTCCGATGCTCTaGGCAGCCAGCAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: VNLDKNPETGRGKDEQLCGSPML*AASRPT
Trigger: TGTGGGCCTGCTGGCTGCCCAGAGCATCGGAGAGCC...ACAGAGTTGCTCATCCTTGCCCCTCCCTGTCTCTGGATTTTTATCAAGGTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GGGAGAGGAAACGTGGACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGATCAGAAACTGGAAGCTaGTTTCAAATGTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: GRGNVDGQEQGGTVLWAGSETGS*FQMSSA
Trigger: AGCAGATGACATTTGAAACCAGCTTCCAGTTTCTGA...TCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGTCCACGTTTCCTCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCACTTGAACTCGGGAGATaGAGGTTGCAGTGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQALELGR*RLQWSR
Trigger: TCGGCTCCACTGCAACCTCCATCTCCCGAGTTCAAG...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CTTACAGTCCTAAGAAGACTCCAAAGCCTCTGCCATCTTAAGCTGCCAAGGCCACACCACCCAGCACTTTaGGAGGCCACAGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LTVLRRLQSLCHLKLPRPHHPAL*EATVGG
Trigger: TCCTCCCACTGTGGCCTCCCAAAGTGCTGGGTGGTG...TGGCCTTGGCAGCTTAAGATGGCAGAGGCTTTGGAGTCTTCTTAGGACTGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp AGGAATCTTGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTGCAACAGCCAAGAGGTaGAGGCAACCCAAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RNLVCCPWPLTAKEPRFPATAKR*RQPKCP
Trigger: TGGACACTTGGGTTGCCTCCACCTCTTGGCTGTTGC...AGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp ATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCGGTGGGAACATAAAATaGTGTAGCTGCTGTGGAAAA +
Preference number: 4 (lower is better)
Translates to: IPVSWSSHAEGRLGHALTGGNIK*CSCCGK
Trigger: TTTTCCACAGCAGCTACACCATTTTATGTTCCCACC...GGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CTTACAGTCCTAAGAAGACTCCAAAGCCTCTGCCATCTTAAGCTGCCAAGGCCACCCCTGCTGGACAAATaGCCTCGCTTGCTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LTVLRRLQSLCHLKLPRPPLLDK*PRLLCW
Trigger: CCAGCACAGCAAGCGAGGCCATTTGTCCAGCAGGGG...TGGCCTTGGCAGCTTAAGATGGCAGAGGCTTTGGAGTCTTCTTAGGACTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCATCCTTCTGCCCCTGCTaGACAAATGGCCTCGCTTGC +
Preference number: 4 (lower is better)
Translates to: EDGELACLGQKTTSSVRASFCPC*TNGLAC
Trigger: GCAAGCGAGGCCATTTGTCCAGCAGGGGCAGAAGGA...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCAGAGATCAAGGTTGGATaGATGCAGCATGGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQAEIKVG*MQHGGG
Trigger: CCCTCCCCCATGCTGCATCCATCCAACCTTGATCTC...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CAA 72 bp TTGCATGGATGTAGGGAGCAACATGGTCACTCTCCCTaGACAAAGCCTCCCTTGATCCCCAACCCTACCCCT +
Preference number: 4 (lower is better)
Translates to: LHGCREQHGHSP*TKPPLIPNPTP
Trigger: AGGGGTAGGGTTGGGGATCAAGGGAGGCTTTGTCAAGGGAGAGTGACCATGTTGCTCCCTACATCCATGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CAA 72 bp GTCCTGTGCACCATGGCTGGAAACGTGATAGTCAACTaGCTGTTGTGTTCCTTTCGGACAACGGATCGCCCG +
Preference number: 4 (lower is better)
Translates to: VLCTMAGNVIVN*LLCSFRTTDRP
Trigger: CGGGCGATCCGTTGTCCGAAAGGAACACAACAGCAAGTTGACTATCACGTTTCCAGCCATGGTGCACAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR TCA 90 bp CAGGGGCTCAGAGTCCTTCTGGCCAGCTGTCCTGTGCACCATGGCTGGAAACGTAGAACACACTGGGATTaGATCTGGATTCCATACCAT +
Preference number: 4 (lower is better)
Translates to: QGLRVLLASCPVHHGWKRRTHWD*IWIPYH
Trigger: ATGGTATGGAATCCAGATTCAATCCCAGTGTGTTCT...ACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCAGAAGGACTCTGAGCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424089.5
CDS-3UTR TCA 90 bp CTGCTTTCAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCGCTTGCCTAAGTTCCTaGACATTCCATGGGGTAACT +
Preference number: 4 (lower is better)
Translates to: LLSGPRSLLCSVLSLGTAACLSS*TFHGVT
Trigger: AGTTACCCCATGGAATGTTCAGGAACTTAGGCAAGC...GGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCTCGGACCTCATCATATaGTGCGGCTTCTGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSSDLII*CGFWQV
Trigger: AACCTGCCAGAAGCCGCATCATATGATGAGGTCCGA...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCATCGTGTTCACAGTTaGACCTTTGGCTCCCGACTG +
Preference number: 4 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSHRVHS*TFGSRL
Trigger: CAGTCGGGAGCCAAAGGTTCAACTGTGAACACGATG...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCCCTTGGTCGCATAGATaGCGGCACCATGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEAPWSHR*RHHGPK
Trigger: CTTTGGCCCATGGTGCCGTCATCTATGCGACCAAGG...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACACTCCTGCAGCACAGGTaGGGCCCCAGCCATCTCAGG +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETLLQHR*GPSHLR
Trigger: CCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGAG...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp AGGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGATGCTACGCTGTACTTaGCTCAGGGAAGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: RQRGWVGGGLCYAVLDSGMLRCT*LREEVL
Trigger: CAAGACTTCTTCCCTGAGTCAAGTACAGCGTAGCAT...CCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp AGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGGGGCCAGTGACTCCTTaGGATGTCATCGTACCGATA +
Preference number: 4 (lower is better)
Translates to: REKPGNLFNRPSSDLGSMGPVTP*DVIVPI
Trigger: TATCGGTACGATGACATCTCAAGGAGTCACTGGCCC...CATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp AGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGGCACGTGCACTCACTTaGGGGCAGAGATCAGATCTT +
Preference number: 4 (lower is better)
Translates to: REKPGNLFNRPSSDLGSMARALT*GQRSDL
Trigger: AAGATCTGATCTCTGCCCTCAAGTGAGTGCACGTGC...CATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp AGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTCTGTCATGGCACGATaGCAGCTTTACTGCACGTGC +
Preference number: 4 (lower is better)
Translates to: REKPGNLFNRPSSDLGSMSVMAR*QLYCTC
Trigger: GCACGTGCAGTAAAGCTGTCATCGTGCCATGACAGA...CATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAAGCGGGTAACTCAGAGTTaGGTTAAACCCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: QRGWVGGGLCYAVLDSGKRVTQS*VKPCSL
Trigger: CAAGGAGCAGGGTTTAACTCAACTCTGAGTTACCCG...CTTCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCTCAATGTGGCCCAGGTaGCCAGAACAGTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSSMWPR*PEQLLK
Trigger: CTTCAGCAACTGTTCTGGGCACCTGGGCCACATTGA...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTCAATGTGGCCCAGGTaGCCAGAACAGTTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: REKPGNLFNRPSSDLGSMSMWPR*PEQLLK
Trigger: CTTCAGCAACTGTTCTGGGCACCTGGGCCACATTGA...CATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGCCCAGGAGGTTGTTCTaGACAATTTCAGTTGTGTAT +
Preference number: 4 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLPRRLF*TISVVY
Trigger: ATACACAACTGAAATTGTGCAGAACAACCTCCTGGG...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CTTACAGTCCTAAGAAGACTCCAAAGCCTCTGCCATCTTAAGCTGCCAAGGCCAGGTACTGCTGATCAGTaGAGGCCAGGACGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: LTVLRRLQSLCHLKLPRPGTADQ*RPGRRP
Trigger: AGGCCTACGTCCTGGCCTGCACTGATCAGCAGTACC...TGGCCTTGGCAGCTTAAGATGGCAGAGGCTTTGGAGTCTTCTTAGGACTGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCGGTACTGCTGATCAGTaGAGGCCAGGACGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEAGTADQ*RPGRRP
Trigger: AGGCCTACGTCCTGGCCTGCACTGATCAGCAGTACC...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGGACTGCACCATCATCTaGAGGCTGTTCTCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: REKPGNLFNRPSSDLGSMDCTII*RLFSGN
Trigger: GTTCCCAGAGAACAGCCTGCAGATGATGGTGCAGTC...CATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTCCTTTGGCTCCCGACTaGACCATCATCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AQCLAQNAASLLNHILEVPLAPD*TIICRL
Trigger: CAGCCTGCAGATGATGGTGCAGTCGGGAGCCAAAGG...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGGATTTCGTTCCTCCTaGATGTCTTCATCGTCGTTC +
Preference number: 4 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRGFRSS*MSSSSF
Trigger: GAACGACGATGAAGACATGCAGGAGGAACGAAATCC...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCACCAAGGTCGCTGCTGTaGTCTGTACTGTCACTTGGA +
Preference number: 4 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQAPRSLL*SVLSLG
Trigger: TCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGG...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTTTTCCAAAACTCAAATaGATCCTCAATGGGCACTTA +
Preference number: 4 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGFPKLK*ILNGHL
Trigger: TAAGTGCCCATTGAGGATGCATTTGAGTTTTGGAAA...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGTCACCTCTTCATCTTaGTCTTGGGTCTTTCGAGCA +
Preference number: 4 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRVTSSS*SWVFRA
Trigger: TGCTCGAAAGACCCAAGAGCAAGATGAAGAGGTGAC...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409681.1
CDS-3UTR CCA 90 bp AGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGGAGCACACCTCTTTaGAATCTGCAGGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: REKPGNLFNRPSSDLGSMWSTPL*NLQGPK
Trigger: CTTTGGGCCCTGCAGATTCCAAAGAGGTGTGCTCCA...CATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AGCTTGCTCTTGCTCTCACACACGTTCTTTACATGTGCGCCCTGGGACCCCAGGCCTGTGCACCATGGCTaGAAACGTGATAGTCAACTT +
Preference number: 4 (lower is better)
Translates to: SLLLLSHTFFTCAPWDPRPVHHG*KRDSQL
Trigger: AAGTTGACTATCACGTTTCCAGCCATGGTGCACAGG...CCTGGGGTCCCAGGGCGCACATGTAAAGAACGTGTGTGAGAGCAAGAGCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409024.3
CDS-3UTR CCA 90 bp GCAATGAGCTTGCTCTTGCTCTCACACACGTTCTTTACATGTGCGCCCTGGGACGTTCGCGGGCACTGGTaGGTGTTAAGTATCCTCGTT +
Preference number: 4 (lower is better)
Translates to: AMSLLLLSHTFFTCAPWDVRGHW*VLSILV
Trigger: AACGAGGATACTTAACACCCACCAGTGCCCGCGAAC...GTCCCAGGGCGCACATGTAAAGAACGTGTGTGAGAGCAAGAGCAAGCTCATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409024.3
CDS-3UTR CCA 90 bp CAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCTGCAGCACAGGTGAGGTATGAGGGACTGGCCTaGAAGTGTACTCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: QDFSLGVMPQRPPAAQVRYEGLA*KCTQKG
Trigger: TCCTTTTTGAGTACACTTCCAGGCCAGTCCCTCATA...CCTCACCTGTGCTGCAGGAGGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTTTGTGGCAAACACCATaGGAATTCCAATTTCGTTGG +
Preference number: 4 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGLWQTP*EFQFRW
Trigger: CCAACGAAATTGGAATTCCCATGGTGTTTGCCACAA...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTATTCCATGGGGTAACTaGCTGTGGGTAGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: QAQGRCCALYCHLELPWIIPWGN*LWVGQF
Trigger: AAACTGACCTACCCACAGCCAGTTACCCCATGGAAT...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAATGGTTGGCCATCCTTaGGAACAAGGTACTGCTGAT +
Preference number: 4 (lower is better)
Translates to: GREVGWVEDYATLYLTQGMVGHP*EQGTAD
Trigger: ATCAGCAGTACCTTGTTCCCAAGGATGGCCAACCAT...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGCTGGTAATATGCATGTaGCAGGAACTGAAACCGCAG +
Preference number: 4 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGLVICM*QELKPQ
Trigger: CTGCGGTTTCAGTTCCTGCCACATGCATATTACCAG...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGCCCAAAGCGATTCAGTaGCTTGTAAACACCCTCGAA +
Preference number: 4 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRPKAIQ*LVNTLE
Trigger: TTCGAGGGTGTTTACAAGCCACTGAATCGCTTTGGG...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGCCCAAAGCGATTCAGTaGCTTGTAAACACCCTCGAA +
Preference number: 4 (lower is better)
Translates to: PVGCMGQNIGLHTKLTAEPKAIQ*LVNTLE
Trigger: TTCGAGGGTGTTTACAAGCCACTGAATCGCTTTGGG...CTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCGTGGGATCCCAGCATaGTGGCTTGCTTCAGAAACT +
Preference number: 4 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSRGIPA*WLASET
Trigger: AGTTTCTGAAGCAAGCCACCATGCTGGGATCCCACG...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTTTGGAGCTGGGCAGATaGTGCCGGGGTAGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: AQCLAQNAASLLNHILEVLELGR*CRGSCY
Trigger: ATAGCAGCTACCCCGGCACCATCTGCCCAGCTCCAA...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAAGCTCTGTACTGTCACTTaGAACTGCCCTGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: QRGWVGGGLCYAVLDSGKLCTVT*NCPGFQ
Trigger: CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAG...CTTCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTGGCAGAGAGGTTGGGTaGGTGGAGGACTATGCTACG +
Preference number: 4 (lower is better)
Translates to: AQCLAQNAASLLNHILEVGREVG*VEDYAT
Trigger: CGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CTTTTCTGTCCATGCCAGGGAAATGTATTGCTGGTGCTAGAGGGAGAGGAAACGGGCAGAGAGGTTGGGTaGGTGGAGGACTATGCTACG +
Preference number: 4 (lower is better)
Translates to: LFCPCQGNVLLVLEGEETGREVG*VEDYAT
Trigger: CGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC...CGTTTCCTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCATGGACAGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTAGTGCCTGGGAGAGATaGAATCCACGGACCCTGTGC +
Preference number: 4 (lower is better)
Translates to: AQCLAQNAASLLNHILEVSAWER*NPRTLC
Trigger: GCACAGGGTCCGTGGATTCCATCTCTCCCAGGCACT...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAAGCAGACACTCCTTAAGTaGTTCCTAACTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: QRGWVGGGLCYAVLDSGKQTLLK*FLTLPR
Trigger: CCTGGGGAGAGTTAGGAACCACTTAAGGAGTGTCTG...CTTCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp AGGAATCTTGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTAGTGGAGATCAAGGTTaGATGGATGCAGCATGGGGG +
Preference number: 4 (lower is better)
Translates to: RNLVCCPWPLTAKEPRFPSGDQG*MDAAWG
Trigger: CCCCCATGCTGCATCCATCCAACCTTGATCTCCACT...AGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCTTCTTGAGGTTTGATTaGCTGAACGCACGTGGAACA +
Preference number: 4 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSFLRFD*LNARGT
Trigger: TGTTCCACGTGCGTTCAGCCAATCAAACCTCAAGAA...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGGCATCTATGTGTATGTaGCAGGGTTTCCTCAACCTC +
Preference number: 4 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGASMCM*QGFLNL
Trigger: GAGGTTGAGGAAACCCTGCCACATACACATAGATGC...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CAA 72 bp GAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTaGACTCAGGGAAGAAGTCTTGATGGGGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: EVGWVEDYATLY*TQGRSLDGDSL
Trigger: CAAAGAGTCCCCATCAAGACTTCTTCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
3UTR CAA 72 bp CTTTGGCCTGATCATGAAGACGGTGAACTGGCTTGTTaGGGGCAGAAGACTACAAGTTCTGTGAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LWPDHEDGELAC*GQKTTSSVRAG
Trigger: CCCTGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTCATGATCAGGCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CAA 72 bp TGCACCATGGCTGGAAACGTGATAGTCAACTTGCTGTaGTGTTCCTTTCGGACAACGGATCGCCCGGTCTTG +
Preference number: 4 (lower is better)
Translates to: CTMAGNVIVNLL*CSFRTTDRPVL
Trigger: CAAGACCGGGCGATCCGTTGTCCGAAAGGAACACAACAGCAAGTTGACTATCACGTTTCCAGCCATGGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409024.3
3UTR CAA 72 bp TGCACCATGGCTGGAAACGTGATAGTCAACTTGCTGTaGTGTTCCTTTCGGACAACGGATCGCCCGGTCATG +
Preference number: 4 (lower is better)
Translates to: CTMAGNVIVNLL*CSFRTTDRPVM
Trigger: CATGACCGGGCGATCCGTTGTCCGAAAGGAACACAACAGCAAGTTGACTATCACGTTTCCAGCCATGGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424089.5
CDS-3UTR TCA 90 bp CAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCTGCAGCACAGGTGAGGGTTCCACTCACCACCTaGCTATTCTTAATTCAACCT +
Preference number: 4 (lower is better)
Translates to: QDFSLGVMPQRPPAAQVRVPLTT*LFLIQP
Trigger: AGGTTGAATTAAGAATAGTCAGGTGGTGAGTGGAAC...CCTCACCTGTGCTGCAGGAGGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CTTCATTCTTCCACAGGGCAGAAAGGTGTTCGCGGGCACTGGTGGGTGTTAAGTTCCAGAAGAGAGCAATaGGCTTGCTCTTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: LHSSTGQKGVRGHWWVLSSRREQ*ACSCSH
Trigger: GTGAGAGCAAGAGCAAGCTCATTGCTCTCTTCTGGA...ACTTAACACCCACCAGTGCCCGCGAACACCTTTCTGCCCTGTGGAAGAATGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409024.3
CDS-3UTR TCA 90 bp CTGGCCAGCTGTCCTGTGCACCATGGCTGGAAACGTGATAGTCAACTTGCTGTTCCTCGTTTTCCTATCTaGGCTTCCTCAATTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LASCPVHHGWKRDSQLAVPRFPI*ASSIPR
Trigger: CCTGGGAATTGAGGAAGCTCAGATAGGAAAACGAGG...AACAGCAAGTTGACTATCACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR TCA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAATATTGACGTGGCTCTaGAGGCGAATCCAAATGTTG +
Preference number: 4 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRILTWL*RRIQML
Trigger: CAACATTTGGATTCGCCTTCAGAGCCACGTCAATAT...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCTGCAGCACAGGTGAGGATTTATGAGCAGCGTTaGCACAACCTGTTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: QDFSLGVMPQRPPAAQVRIYEQR*HNLFSC
Trigger: ACAGGAAAACAGGTTGTGTCAACGCTGCTCATAAAT...CCTCACCTGTGCTGCAGGAGGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCGTGAACCCCACCAGATaGTCAATCTCCATTACATTT +
Preference number: 4 (lower is better)
Translates to: LSLATHSKRTPLPYSGGAVNPTR*SISITF
Trigger: AAATGTAATGGAGATTGATCATCTGGTGGGGTTCAC...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTATGCTACAGCATGGATaGACCTTGAGGACATTATGC +
Preference number: 4 (lower is better)
Translates to: QAQGRCCALYCHLELPWIMLQHG*TLRTLC
Trigger: GCATAATGTCCTCAAGGTTCATCCATGCTGTAGCAT...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTAACCTCCCAGGCCATTaGGTCCAACTTGCGCGAAGA +
Preference number: 4 (lower is better)
Translates to: AQCLAQNAASLLNHILEVNLPGH*VQLARR
Trigger: TCTTCGCGCAAGTTGGACTCAATGGCCTGGGAGGTT...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CAGGGGCTCAGAGTCCTTCTGGCCAGCTGTCCTGTGCACCATGGCTGGAAACGTTTTTCTTCCAGAAATTaGGCTCTTCAGCCGAATACA +
Preference number: 4 (lower is better)
Translates to: QGLRVLLASCPVHHGWKRFSSRN*ALQPNT
Trigger: TGTATTCGGCTGAAGAGCTCAATTTCTGGAAGAAAA...ACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCAGAAGGACTCTGAGCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR GCA 90 bp GGAGGGGCAAGGATGAGCAACTCTGTCACTTTCCAGGTGAAGCTGGCCCAGCTCTTCTTGGGCCATCAATaGCAGAAGTTTTCGAATCAG +
Preference number: 4 (lower is better)
Translates to: GGARMSNSVTFQVKLAQLFLGHQ*QKFSNQ
Trigger: CTGATTCGAAAACTTCTGGCATTGATGGCCCAAGAA...GAGCTGGGCCAGCTTCACCTGGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCTGCAGCACAGGTGAGGTTGCCTCTTGACATCTaGCTTTGGCTTCACCAAAAT +
Preference number: 4 (lower is better)
Translates to: QDFSLGVMPQRPPAAQVRLPLDI*LWLHQN
Trigger: ATTTTGGTGAAGCCAAAGGCAGATGTCAAGAGGCAA...CCTCACCTGTGCTGCAGGAGGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCACATCTCGCCTCTGCCTaGAAAGTGGAAGGTGTTGAG +
Preference number: 4 (lower is better)
Translates to: EDGELACLGQKTTSSVRAHLASA*KVEGVE
Trigger: CTCAACACCTTCCACTTTGCAGGCAGAGGCGAGATG...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCACGTTCATCTCGCCTCTaGCTGCAAAGTGGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: EDGELACLGQKTTSSVRARSSRL*LQSGRC
Trigger: ACACCTTCCACTTTGCAGGCAGAGGCGAGATGAACG...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCGTTTCAAATGTCATCTaGTGTAGCGGGGAAGAGTTT +
Preference number: 4 (lower is better)
Translates to: LSLATHSKRTPLPYSGGAVSNVI*CSGEEF
Trigger: AAACTCTTCCCCGCTACAGCAGATGACATTTGAAAC...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCATGAATGTCTTACCCTaGAGGCTGGGCCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEAMNVLP*RLGPSC
Trigger: GCAGGAAGGGCCCAGCCTGCAGGGTAAGACATTCAT...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp GTAAACCTTGATAAAAATCCAGAGACAGGGAGGGGCAAGGATGAGCAACTCTGTCCTCTGCGCCCTCAGTaGCTGGGAGAGATGGAATCC +
Preference number: 4 (lower is better)
Translates to: VNLDKNPETGRGKDEQLCPLRPQ*LGEMES
Trigger: GGATTCCATCTCTCCCAGGCACTGAGGGCGCAGAGG...ACAGAGTTGCTCATCCTTGCCCCTCCCTGTCTCTGGATTTTTATCAAGGTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCCGATGGTCACAGCCCTaGCAATATGCAGGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEARWSQP*QYAGLA
Trigger: AGCAAGCCCTGCATATTGGCAGGGCTGTGACCATCG...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCAGACTCCAAAGCCTCTaGCATCTTAAGCTGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSRLQSL*HLKLPR
Trigger: CCTTGGCAGCTTAAGATGGCAGAGGCTTTGGAGTCT...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCACTAACTCTCCCCAGGTaGAGAACACTTAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: EDGELACLGQKTTSSVRALTLPR*RTLKGP
Trigger: GGGACCCTTAAGTGTTCTGCACCTGGGGAGAGTTAG...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp AGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGAGGAAGACCCCAGCTTaGAAAAGACATAGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: REKPGNLFNRPSSDLGSMRKTPA*KRHRGS
Trigger: GCTGCCTCTATGTCTTTTGCAAGCTGGGGTCTTCCT...CATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp CTTACAGTCCTAAGAAGACTCCAAAGCCTCTGCCATCTTAAGCTGCCAAGGCCAAGTTACTTGGAAGGCTaGGGTGGGAGGGTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LTVLRRLQSLCHLKLPRPSYLEG*GGRVAW
Trigger: CCAAGCAACCCTCCCACCGCAGCCTTCCAAGTAACT...TGGCCTTGGCAGCTTAAGATGGCAGAGGCTTTGGAGTCTTCTTAGGACTGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGCCATTAGTAAACATCTaGTCTCCTAGGCGACTGACT +
Preference number: 4 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGPLVNI*SPRRLT
Trigger: AGTCAGTCGCCTAGGAGACCAGATGTTTACTAATGG...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTTGTCTATGAGGGACTaGCCTGGAAGTGTACTCAAA +
Preference number: 4 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRLSMRD*PGSVLK
Trigger: TTTGAGTACACTTCCAGGCCAGTCCCTCATAGACAA...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGTTGTCTATGAGGGACTaGCCTGGAAGTGTACTCAAA +
Preference number: 4 (lower is better)
Translates to: PVGCMGQNIGLHTKLTAELSMRD*PGSVLK
Trigger: TTTGAGTACACTTCCAGGCCAGTCCCTCATAGACAA...CTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTAGTCCCGCCAATGGTTaGCCATCCTTGGGAACAAGG +
Preference number: 4 (lower is better)
Translates to: AQCLAQNAASLLNHILEVSPANG*PSLGTR
Trigger: CCTTGTTCCCAAGGATGGCCAACCATTGGCGGGACT...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCACGTCCTGCCATGCAGTaGAAGAAGAACTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: EDGELACLGQKTTSSVRARPAMQ*KKNSGG
Trigger: ACCTCCTGAGTTCTTCTTCCACTGCATGGCAGGACG...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCATTCTCAGCAGGGTGTTaGGGTGCTTGCTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQAFSAGC*GACFAI
Trigger: AATGGCAAAGCAAGCACCCCAACACCCTGCTGAGAA...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCGCTTCTCCTTGCGTTTaGCATCAGAGGCATCGGCGT +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEAASPCV*HQRHRR
Trigger: ACGCCGATGCCTCTGATGCCAAACGCAAGGAGAAGC...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCGCTTGCTTCAGAAACTaGAAGCTGGTTTCAAATGTC +
Preference number: 4 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSACFRN*KLVSNV
Trigger: GACATTTGAAACCAGCTTCCAGTTTCTGAAGCAAGC...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAAGCCATTGCACTCAGCCTaGGTAACAAGTGCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: QRGWVGGGLCYAVLDSGKPLHSA*VTSAKV
Trigger: CACTTTTGCACTTGTTACCCAGGCTGAGTGCAATGG...CTTCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAGCCATCTGCAGAGGTaGTATCACTCAACGATGAAA +
Preference number: 4 (lower is better)
Translates to: PVGCMGQNIGLHTKLTAESHLQR*YHSTMK
Trigger: TTTCATCGTTGAGTGATACCACCTCTGCAGATGGCT...CTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp TTCATGTTTCCAAGCAAGAATCATGGGTTGGGGAAGGCAAGTGTTTACTGTGGTCTACAGGCCCGGGGCTaGCTTGGCTCCCGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: FMFPSKNHGLGKASVYCGLQARG*LGSREN
Trigger: GTTTTCACGGGAGCCAAGCCAGCCCCGGGCCTGTAG...ACCACAGTAAACACTTGCCTTCCCCAACCCATGATTCTTGCTTGGAAACATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGGCAAGAATCATGGGTTaGGGAAGGCAAGTGTTTACT +
Preference number: 4 (lower is better)
Translates to: PVGCMGQNIGLHTKLTAEARIMG*GRQVFT
Trigger: AGTAAACACTTGCCTTCCCCAACCCATGATTCTTGC...CTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GGCTCAGAGTCCTTCTGGCCAGCTGTCCTGTGCACCATGGCTGGAAACGTGATAGTTCCACTCACCACCTaGCTATTCTTAATTCAACCT +
Preference number: 4 (lower is better)
Translates to: GSESFWPAVLCTMAGNVIVPLTT*LFLIQP
Trigger: AGGTTGAATTAAGAATAGTCAGGTGGTGAGTGGAAC...TATCACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCAGAAGGACTCTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR TCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACAGCCCAGAACAGTTGCTaGAGTCCTGCACGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETAQNSC*SPARRW
Trigger: CCACCTGCGTGCAGGACTTCAGCAACTGTTCTGGGC...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAAGAACACACTGGGATTaGATCTGGATTCCATACCAT +
Preference number: 4 (lower is better)
Translates to: GREVGWVEDYATLYLTQGRTHWD*IWIPYH
Trigger: ATGGTATGGAATCCAGATTCAATCCCAGTGTGTTCT...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAAGAACACACTGGGATTaGATCTGGATTCCATACCAT +
Preference number: 4 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRRTHWD*IWIPYH
Trigger: ATGGTATGGAATCCAGATTCAATCCCAGTGTGTTCT...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGGACTGGGCGATACCTTaGGGGCGGCACCACCAAGAA +
Preference number: 4 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGDWAIP*GRHHQE
Trigger: TTCTTGGTGGTGCCGCCCTCAAGGTATCGCCCAGTC...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCCATCGTGTTCACAGTTaGACCTTTGGCTCCCGACTG +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEAHRVHS*TFGSRL
Trigger: CAGTCGGGAGCCAAAGGTTCAACTGTGAACACGATG...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GTAAACCTTGATAAAAATCCAGAGACAGGGAGGGGCAAGGATGAGCAACTCTGTGCATGTGGCAGGAACTaGAACCGCAGCTGGTACACC +
Preference number: 4 (lower is better)
Translates to: VNLDKNPETGRGKDEQLCACGRN*NRSWYT
Trigger: GGTGTACCAGCTGCGGTTTCAGTTCCTGCCACATGC...ACAGAGTTGCTCATCCTTGCCCCTCCCTGTCTCTGGATTTTTATCAAGGTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTCGGCAAACACATCCTTaGTCTCCTTCTCGATCACCC +
Preference number: 4 (lower is better)
Translates to: AQCLAQNAASLLNHILEVRQTHP*SPSRSP
Trigger: GGGTGATCGAGAAGGAGATCAAGGATGTGTTTGCCG...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAAGGTTAATTACCCGCCCTaGGCTGAAATAACAGTAGAC +
Preference number: 4 (lower is better)
Translates to: QRGWVGGGLCYAVLDSGKVNYPP*AEITVD
Trigger: GTCTACTGTTATTTCAGCTCAGGGCGGGTAATTAAC...CTTCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp AGGAATCTTGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTGCAAGAAGGCAATTCTaGCACATGCTACAGCATGGA +
Preference number: 4 (lower is better)
Translates to: RNLVCCPWPLTAKEPRFPARRQF*HMLQHG
Trigger: TCCATGCTGTAGCATGTGTCAGAATTGCCTTCTTGC...AGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GTAAACCTTGATAAAAATCCAGAGACAGGGAGGGGCAAGGATGAGCAACTCTGTGGTGGTCTCGAATCCTaGCCTCAGATGATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: VNLDKNPETGRGKDEQLCGGLES*PQMICP
Trigger: CGGGCAGATCATCTGAGGTCAGGATTCGAGACCACC...ACAGAGTTGCTCATCCTTGCCCCTCCCTGTCTCTGGATTTTTATCAAGGTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGTTTGGTGGTTGTAATTaGAGTAAAACTGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQFGGCN*SKTAPG
Trigger: CCCTGGTGCAGTTTTACTTCAATTACAACCACCAAA...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCAGGATGGCTGGACTCCTaGTTCTTTTTCAGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQAGWLDS*FFFSFP
Trigger: AGGGAAACTGAAAAAGAATCAGGAGTCCAGCCATCC...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp ATGGCTGGAAACGTGATAGTCAACTTGCTGTTGTGTTCCTTTCGGACAACGGATTGGCCAGCTGTCCTGTaGACCATGGCTGGAAACGTG +
Preference number: 4 (lower is better)
Translates to: MAGNVIVNLLLCSFRTTDWPAVL*TMAGNV
Trigger: CACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCA...ATCCGTTGTCCGAAAGGAACACAACAGCAAGTTGACTATCACGTTTCCAGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR GCA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGATTGCCTCTTGACATCTaGCTTTGGCTTCACCAAAAT +
Preference number: 4 (lower is better)
Translates to: GREVGWVEDYATLYLTQGLPLDI*LWLHQN
Trigger: ATTTTGGTGAAGCCAAAGGCAGATGTCAAGAGGCAA...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CTGCTTTCAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCGCCAAAAGGCATGCATaGCTTGTTAATCTCATTGCT +
Preference number: 4 (lower is better)
Translates to: LLSGPRSLLCSVLSLGTAAKRHA*LVNLIA
Trigger: AGCAATGAGATTAACAAGGCATGCATGCCTTTTGGC...GGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCACACACCCTGGTGAGTTaGTTCTTCAGGCTTTTCACT +
Preference number: 4 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQAHTLVS*FFRLFT
Trigger: AGTGAAAAGCCTGAAGAAGCAACTCACCAGGGTGTG...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCAGGATTTCGTTCCTCCTaGATGTCTTCATCGTCGTTC +
Preference number: 4 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQAGFRSS*MSSSSF
Trigger: GAACGACGATGAAGACATGCAGGAGGAACGAAATCC...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGGTTTCAAATGTCATCTaGTGTAGCGGGGAAGAGTTT +
Preference number: 4 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQVSNVI*CSGEEF
Trigger: AAACTCTTCCCCGCTACAGCAGATGACATTTGAAAC...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACATGTGTGGGAGTGAACTaGTGCGGCCCTGGAGCGACT +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETCVGVN*CGPGAT
Trigger: AGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACA...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CTTACAGTCCTAAGAAGACTCCAAAGCCTCTGCCATCTTAAGCTGCCAAGGCCAAGTTCAAGATTCTCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LTVLRRLQSLCHLKLPRPSSRFS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGAGAATCTTGAACT...TGGCCTTGGCAGCTTAAGATGGCAGAGGCTTTGGAGTCTTCTTAGGACTGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp GGAGGGGCAAGGATGAGCAACTCTGTCACTTTCCAGGTGAAGCTGGCCCAGCTCAGTTGTACGACTCTCTaGTCGCTCTTTTGTTTTGAA +
Preference number: 4 (lower is better)
Translates to: GGARMSNSVTFQVKLAQLSCTTL*SLFCFE
Trigger: TTCAAAACAAAAGAGCGAGCAGAGAGTCGTACAACT...GAGCTGGGCCAGCTTCACCTGGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409681.1
CDS-3UTR CCA 90 bp CCTGTGCACCATGGCTGGAAACGTGATAGTCAACTTGCTGTTGTGTTCCTTTCGGCCAGGGCATGTTCTTaGAGATCAACATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PVHHGWKRDSQLAVVFLSARACS*RSTSSR
Trigger: CCTGGAGGATGTTGATCTCCAAGAACATGCCCTGGC...CGAAAGGAACACAACAGCAAGTTGACTATCACGTTTCCAGCCATGGTGCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR CCA 90 bp CTTTTCTGTCCATGCCAGGGAAATGTATTGCTGGTGCTAGAGGGAGAGGAAACGAGTCCTGCACGCAGGTaGAGCACACCTCTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: LFCPCQGNVLLVLEGEETSPARR*STPLWN
Trigger: ATTCCAAAGAGGTGTGCTCCACCTGCGTGCAGGACT...CGTTTCCTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCATGGACAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTGTTCGCGGGCACTGGTaGGTGTTAAGTATCCTCGTT +
Preference number: 4 (lower is better)
Translates to: AQCLAQNAASLLNHILEVVRGHW*VLSILV
Trigger: AACGAGGATACTTAACACCCACCAGTGCCCGCGAAC...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAAGTGCAAGTTCACCGTCTaGCCATTAGTAAACATCTGG +
Preference number: 4 (lower is better)
Translates to: QRGWVGGGLCYAVLDSGKCKFTV*PLVNIW
Trigger: CCAGATGTTTACTAATGGCCAGACGGTGAACTTGCA...CTTCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGTTGTGGCAAACACCATaGGAATTCCAATTTCGTTGG +
Preference number: 4 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQLWQTP*EFQFRW
Trigger: CCAACGAAATTGGAATTCCCATGGTGTTTGCCACAA...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCAATGGTTGGCCATCCTTaGGAACAAGGTACTGCTGAT +
Preference number: 4 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQAMVGHP*EQGTAD
Trigger: ATCAGCAGTACCTTGTTCCCAAGGATGGCCAACCAT...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGTGGGATGTGGTCCTCTaGGATTATATTTATGAGCAG +
Preference number: 4 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGWDVVL*DYIYEQ
Trigger: CTGCTCATAAATATAATCCCAGAGGACCACATCCCA...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGCTTGACATCTGCCTTTaGCTTCACCAAAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRLDICL*LHQNVF
Trigger: GAAGACATTTTGGTGAAGCCAAAGGCAGATGTCAAG...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGATACAGAAGGACTCCTaGACGTCAATTTTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: PVGCMGQNIGLHTKLTAEIQKDS*TSIFCN
Trigger: GTTGCAGAAAATTGACGTCCAGGAGTCCTTCTGTAT...CTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AGGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGCGCAGCTGGTACACCTaGAATTTGTTCTGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: RQRGWVGGGLCYAVLDSGRSWYT*NLFCFS
Trigger: AGAAAAACAGAACAAATTCCAGGTGTACCAGCTGCG...CCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCACATACGTGTTGGCTATaGCGTGGATGTCGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: EDGELACLGQKTTSSVRAHTCWL*RGCRWS
Trigger: ACTCCAACGACATCCACGCCATAGCCAACACGTATG...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACAAAGGGTCCTTGGAGCTaGGCAGATGGTGCCGGGGTA +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETKGPWS*ADGAGV
Trigger: TACCCCGGCACCATCTGCCCAGCTCCAAGGACCCTT...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CTTACAGTCCTAAGAAGACTCCAAAGCCTCTGCCATCTTAAGCTGCCAAGGCCATGGATTCCAGTCTCCTaGTCCTCTCATGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LTVLRRLQSLCHLKLPRPWIPVS*SSHAEG
Trigger: GCCTTCTGCATGAGAGGACCAGGAGACTGGAATCCA...TGGCCTTGGCAGCTTAAGATGGCAGAGGCTTTGGAGTCTTCTTAGGACTGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GTAAACCTTGATAAAAATCCAGAGACAGGGAGGGGCAAGGATGAGCAACTCTGTGCCCCAGCAGTGACCTaGGTTCTATGTGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: VNLDKNPETGRGKDEQLCAPAVT*VLCVGV
Trigger: CACTCCCACACATAGAACCCAGGTCACTGCTGGGGC...ACAGAGTTGCTCATCCTTGCCCCTCCCTGTCTCTGGATTTTTATCAAGGTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGATAGAAGCTAGCCTCTaGTTTTACAAAGCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLIEASL*FYKAFV
Trigger: TACAAAGGCTTTGTAAAACCAGAGGCTAGCTTCTAT...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGAGAAAATCCCCGCCCTaGGTTCTCAAATCCAAATGC +
Preference number: 4 (lower is better)
Translates to: REKPGNLFNRPSSDLGSMRKSPP*VLKSKC
Trigger: GCATTTGGATTTGAGAACCCAGGGCGGGGATTTTCT...CATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCTCCAAGCAAGAATCATaGGTTGGGGAAGGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSSKQES*VGEGKC
Trigger: ACACTTGCCTTCCCCAACCCATGATTCTTGCTTGGA...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CTCAGAGTCCTTCTGGCCAGCTGTCCTGTGCACCATGGCTGGAAACGTGATAGTGTTCCACTCACCACCTaGCTATTCTTAATTCAACCT +
Preference number: 4 (lower is better)
Translates to: LRVLLASCPVHHGWKRDSVPLTT*LFLIQP
Trigger: AGGTTGAATTAAGAATAGTCAGGTGGTGAGTGGAAC...ACTATCACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCAGAAGGACTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR TCA 90 bp CTTTTCTGTCCATGCCAGGGAAATGTATTGCTGGTGCTAGAGGGAGAGGAAACGTCCAGAAGAGAGCAATaGGCTTGCTCTTGCTCTCAC +
Preference number: 4 (lower is better)
Translates to: LFCPCQGNVLLVLEGEETSRREQ*ACSCSH
Trigger: GTGAGAGCAAGAGCAAGCTCATTGCTCTCTTCTGGA...CGTTTCCTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCATGGACAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAAGTATCAAACACAATATTaGCGTGGCTCTGAAGGCGAA +
Preference number: 4 (lower is better)
Translates to: QRGWVGGGLCYAVLDSGKYQTQY*RGSEGE
Trigger: TTCGCCTTCAGAGCCACGTCAATATTGTGTTTGATA...CTTCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGACATGTCTGGGCAGATaGCTGAGCGCGCAGCGTAGT +
Preference number: 4 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGTCLGR*LSAQRS
Trigger: ACTACGCTGCGCGCTCAGTCATCTGCCCAGACATGT...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTAGTCATGCTTGCCCCTaGAACCATGTGATCCTGGAT +
Preference number: 4 (lower is better)
Translates to: AQCLAQNAASLLNHILEVSHACP*NHVILD
Trigger: ATCCAGGATCACATGGTTTCAGGGGCAAGCATGACT...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAAGATTTATGAGCAGCGTTaGCACAACCTGTTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: QRGWVGGGLCYAVLDSGKIYEQR*HNLFSC
Trigger: ACAGGAAAACAGGTTGTGTCAACGCTGCTCATAAAT...CTTCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAAGCTGGGATTATATTTATaGGCAGCGTTGACACAACCT +
Preference number: 4 (lower is better)
Translates to: QRGWVGGGLCYAVLDSGKLGLYL*AALTQP
Trigger: AGGTTGTGTCAACGCTGCTCATAAATATAATCCCAG...CTTCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACACTTCCACGCCCAAGGTaGAGCCTCTGTAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETLPRPR*SLCRAA
Trigger: TGCAGCTCTACAGAGGCTTCACCTTGGGCGTGGAAG...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CTTTTCTGTCCATGCCAGGGAAATGTATTGCTGGTGCTAGAGGGAGAGGAAACGAGAATCTTGTTTCCATaGAGCGCAGGATGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: LFCPCQGNVLLVLEGEETRILFP*SAGCPR
Trigger: CCGAGGACATCCTGCGCTTCATGGAAACAAGATTCT...CGTTTCCTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCATGGACAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCAGAATCTTGTTTCCATaGAGCGCAGGATGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEARILFP*SAGCPR
Trigger: CCGAGGACATCCTGCGCTTCATGGAAACAAGATTCT...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGTCAGGAGGCACCGAGTaGTGCCCTTGGTCGCATAGA +
Preference number: 4 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGSGGTE*CPWSHR
Trigger: TCTATGCGACCAAGGGCATCACTCGGTGCCTCCTGA...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACATCAGGAGGCACCGAGTaGTGCCCTTGGTCGCATAGA +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETSGGTE*CPWSHR
Trigger: TCTATGCGACCAAGGGCATCACTCGGTGCCTCCTGA...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCATAGCTCTGGGAGGTTaGTTCCTTCTGTGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSIALGG*FLLCLA
Trigger: TGCTAAACACAGAAGGAATCAACCTCCCAGAGCTAT...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GTAAACCTTGATAAAAATCCAGAGACAGGGAGGGGCAAGGATGAGCAACTCTGTGCCTCCACACCAAACTaGCAGCAGAGAAAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VNLDKNPETGRGKDEQLCASTPN*QQRKAR
Trigger: CCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGC...ACAGAGTTGCTCATCCTTGCCCCTCCCTGTCTCTGGATTTTTATCAAGGTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCAAGAGAACCACCAAAGTaGGCGTGTAATTCCCTAAGG +
Preference number: 4 (lower is better)
Translates to: EDGELACLGQKTTSSVRAREPPK*ACNSLR
Trigger: CCTTAGGGAATTACACGCTCACTTTGGTGGTTCTCT...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGTTGGGATTACAGGTGTaGACGCCTGGCCTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGLGLQV*TPGLAS
Trigger: TGAGGCCAGGCCAGGCGTTCACACCTGTAATCCCAA...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CTTTTCTGTCCATGCCAGGGAAATGTATTGCTGGTGCTAGAGGGAGAGGAAACGATAGAGGCAGCACTGTaGCTGGAACTGAATAGCCAC +
Preference number: 4 (lower is better)
Translates to: LFCPCQGNVLLVLEGEETIEAAL*LELNSH
Trigger: GTGGCTATTCAGTTCCAGTCACAGTGCTGCCTCTAT...CGTTTCCTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCATGGACAGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp CTCAGAGTCCTTCTGGCCAGCTGTCCTGTGCACCATGGCTGGAAACGTGATAGTCCCAGGAGGTTGTTCTaGACAATTTCAGTTGTGTAT +
Preference number: 4 (lower is better)
Translates to: LRVLLASCPVHHGWKRDSPRRLF*TISVVY
Trigger: ATACACAACTGAAATTGTGCAGAACAACCTCCTGGG...ACTATCACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCAGAAGGACTCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR GCA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGCTTAGCATTCATATGTaGCTTCCAGAAGAGAGCAAT +
Preference number: 4 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRLSIHM*LPEESN
Trigger: ATTGCTCTCTTCTGGAAGGCACATATGAATGCTAAG...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp AGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTGAAACTTTGTCACCTCTCGTCCTGCCATaGAGTGGAAGAAGAACTCAG +
Preference number: 4 (lower is better)
Translates to: RQVFTVVQLRTVVSETLSPLVLP*SGRRTQ
Trigger: CTGAGTTCTTCTTCCACTGCATGGCAGGACGAGAGG...TGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCAGCATCCACAATGTaGCCCTCCTCTTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEASASTM*PSSSSS
Trigger: TGATGAGGAAGAGGAGGGGCACATTGTGGATGCTGA...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGTTCTCAAATCCAAATaGAGAAACTGCAAACCAAGG +
Preference number: 4 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRVLKSK*RNCKPR
Trigger: CCTTGGTTTGCAGTTTCTGCATTTGGATTTGAGAAC...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTAGGCCTCCAGGTTTCTaGTGGAAGCATCATCCCTTT +
Preference number: 4 (lower is better)
Translates to: AQCLAQNAASLLNHILEVRPPGF*WKHHPF
Trigger: AAAGGGATGATGCTTCCAGCAGAAACCTGGAGGCCT...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTTGTGCATCTTAGGGTaGCTGGGACACAGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEALCILG*LGHSGD
Trigger: ATCTCCACTGTGTCCCAGGCACCCTAAGATGCACAA...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGCTCCCATTTTATGATTaGTTTCGTCTTCTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGLPFYD*FRLLPL
Trigger: AAGCGGAAGAAGACGAAAGCAATCATAAAATGGGAG...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409681.1
CDS-3UTR CCA 90 bp AGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTGAAACTTTGTCATGGAGCACACCTCTTTaGAATCTGCAGGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RQVFTVVQLRTVVSETLSWSTPL*NLQGPK
Trigger: CTTTGGGCCCTGCAGATTCCAAAGAGGTGTGCTCCA...TGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CTTCCAGAAGAGAGCAATGAGCTTGCTCTTGCTCTCACACACGTTCTTTACATGTTTACATGTGCGCCCTaGGACCCCAGGAGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LPEESNELALALTHVLYMFTCAP*DPRRLF
Trigger: GAACAACCTCCTGGGGTCCCAGGGCGCACATGTAAA...CATGTAAAGAACGTGTGTGAGAGCAAGAGCAAGCTCATTGCTCTCTTCTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409024.3
CDS-3UTR CCA 90 bp ATGGCTGGAAACGTGATAGTCAACTTGCTGTTGTGTTCCTTTCGGACAACGGATGGTGTTCGCGGGCACTaGTGGGTGTTAAGTATCCTC +
Preference number: 4 (lower is better)
Translates to: MAGNVIVNLLLCSFRTTDGVRGH*WVLSIL
Trigger: GAGGATACTTAACACCCACCAGTGCCCGCGAACACC...ATCCGTTGTCCGAAAGGAACACAACAGCAAGTTGACTATCACGTTTCCAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR CCA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGAAGTTCAGTGGGATGTaGTCCTCTGGGATTATATTT +
Preference number: 4 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRKFSGM*SSGIIF
Trigger: AAATATAATCCCAGAGGACCACATCCCACTGAACTT...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTAAGTTCAGTGGGATGTaGTCCTCTGGGATTATATTT +
Preference number: 4 (lower is better)
Translates to: QAQGRCCALYCHLELPWIKFSGM*SSGIIF
Trigger: AAATATAATCCCAGAGGACCACATCCCACTGAACTT...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp TTTAAAAACCAGACATGCTGTCTTAATACTCATCCATCAGGAAAGACACAGGAAGCAGCCCTGACAGCCTaGGGCCCGCAGTGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: FKNQTCCLNTHPSGKTQEAALTA*GPQWVD
Trigger: ATCCACCCACTGCGGGCCCCAGGCTGTCAGGGCTGC...TTCCTGTGTCTTTCCTGATGGATGAGTATTAAGACAGCATGTCTGGTTTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp AGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTGAAACTTTGTCACGTGGGATCCCAGCATaGTGGCTTGCTTCAGAAACT +
Preference number: 4 (lower is better)
Translates to: RQVFTVVQLRTVVSETLSRGIPA*WLASET
Trigger: AGTTTCTGAAGCAAGCCACCATGCTGGGATCCCACG...TGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACATTTGGGAGGCCACAGTaGGAGGACCGCTTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETFGRPQ*EDRLSL
Trigger: TAGGCTCAAGCGGTCCTCCCACTGTGGCCTCCCAAA...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GTAAACCTTGATAAAAATCCAGAGACAGGGAGGGGCAAGGATGAGCAACTCTGTCCATGTTGGCCAGGGTaGTCTCGAATCCTGACCTCA +
Preference number: 4 (lower is better)
Translates to: VNLDKNPETGRGKDEQLCPCWPG*SRILTS
Trigger: TGAGGTCAGGATTCGAGACCACCCTGGCCAACATGG...ACAGAGTTGCTCATCCTTGCCCCTCCCTGTCTCTGGATTTTTATCAAGGTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTGGCATTATTGATATTTaGGGCTGGACAATTCTTTGC +
Preference number: 4 (lower is better)
Translates to: QAQGRCCALYCHLELPWIGIIDI*GWTILC
Trigger: GCAAAGAATTGTCCAGCCCCAAATATCAATAATGCC...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GTAAACCTTGATAAAAATCCAGAGACAGGGAGGGGCAAGGATGAGCAACTCTGTTCGGACCTCATCATATaGTGCGGCTTCTGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: VNLDKNPETGRGKDEQLCSDLII*CGFWQV
Trigger: AACCTGCCAGAAGCCGCATCATATGATGAGGTCCGA...ACAGAGTTGCTCATCCTTGCCCCTCCCTGTCTCTGGATTTTTATCAAGGTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGTTGCCCAGGCTGGAGTaGCATAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGLPRLE*HNLGSL
Trigger: CAGTGAGCCGAGATTATGTCACTCCAGCCTGGGCAA...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCCGACATTTACGTGGATaGGATCACTTCTACATGGGG +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEARHLRG*DHFYMG
Trigger: CCCCATGTAGAAGTGATCTCATCCACGTAAATGTCG...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409681.1
CDS-3UTR GCA 90 bp AGTCAACTTGCTGTTGTGTTCCTTTCGGACAACGGATCGCCCGGTCTTGCAGTGCCCAGGAGGTTGTTCTaGACAATTTCAGTTGTGTAT +
Preference number: 4 (lower is better)
Translates to: SQLAVVFLSDNGSPGLAVPRRLF*TISVVY
Trigger: ATACACAACTGAAATTGTGCAGAACAACCTCCTGGG...CACTGCAAGACCGGGCGATCCGTTGTCCGAAAGGAACACAACAGCAAGTTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409024.3
CDS-3UTR GCA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCAGCCAAAAGGCATGCATaGCTTGTTAATCTCATTGCT +
Preference number: 4 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQAAKRHA*LVNLIA
Trigger: AGCAATGAGATTAACAAGGCATGCATGCCTTTTGGC...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGTCACACAGTGAGCGCTaGCACTTCAGCTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGSHSER*HFSCSK
Trigger: CTTGCTGCAGCTGAAGTGGCAGCGCTCACTGTGTGA...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACAGGTGTTCGCGGGCACTaGTGGGTGTTAAGTATCCTC +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETGVRGH*WVLSIL
Trigger: GAGGATACTTAACACCCACCAGTGCCCGCGAACACC...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCATTCCATGGGGTAACTaGCTGTGGGTAGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEAIPWGN*LWVGQF
Trigger: AAACTGACCTACCCACAGCCAGTTACCCCATGGAAT...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACAAGGGTCTGTGCAGTGTaGGCTGTCGGTTCAGTAGCA +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETRVCAV*AVGSVA
Trigger: TGCTACTGAACCGACAGCCCACACTGCACAGACCCT...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCCTGGATAAAACTTCATaGAGATGCTGTGATTTCATT +
Preference number: 4 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSLDKTS*RCCDFI
Trigger: AATGAAATCACAGCATCTCCATGAAGTTTTATCCAG...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCTTCATCTTGCTCTTaGGTCTTTCGAGCACCTTCC +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEASSSCS*VFRAPS
Trigger: GGAAGGTGCTCGAAAGACCCAAGAGCAAGATGAAGA...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAATAGAAGCTAGCCTCTaGTTTTACAAAGCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRIEASL*FYKAFV
Trigger: TACAAAGGCTTTGTAAAACCAGAGGCTAGCTTCTAT...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp AGGAATCTTGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTCCATCAGATTTGACTTaGGCCTACTTTCCAAAACTC +
Preference number: 4 (lower is better)
Translates to: RNLVCCPWPLTAKEPRFPPSDLT*AYFPKL
Trigger: GAGTTTTGGAAAGTAGGCCCAAGTCAAATCTGATGG...AGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GTAAACCTTGATAAAAATCCAGAGACAGGGAGGGGCAAGGATGAGCAACTCTGTAGCTGCTGTGGAAAATaGGACAGCAGTTCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: VNLDKNPETGRGKDEQLCSCCGK*DSSSPR
Trigger: TCTGGGGGAACTGCTGTCCCATTTTCCACAGCAGCT...ACAGAGTTGCTCATCCTTGCCCCTCCCTGTCTCTGGATTTTTATCAAGGTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTATTTCAAGAGCAGTCTaGACTCTGACAGCCCCTGAT +
Preference number: 4 (lower is better)
Translates to: AQCLAQNAASLLNHILEVISRAV*TLTAPD
Trigger: ATCAGGGGCTGTCAGAGTCCAGACTGCTCTTGAAAT...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp AGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTGAAACTTTGTCAGGGTACCTCAACCTTTaGCCTGATCATGAAGACGGT +
Preference number: 4 (lower is better)
Translates to: RQVFTVVQLRTVVSETLSGYLNL*PDHEDG
Trigger: ACCGTCTTCATGATCAGGCCAAAGGTTGAGGTACCC...TGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGCAGCTGGGCAAGGCATaGTCCTATAGGGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGQLGKA*SYRGQC
Trigger: ACACTGTCCCCTATAGGACCATGCCTTGCCCAGCTG...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CTTACAGTCCTAAGAAGACTCCAAAGCCTCTGCCATCTTAAGCTGCCAAGGCCAGTAATCCCAGCACTTTaGAAGGTGAAGGCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: LTVLRRLQSLCHLKLPRPVIPAL*KVKAAD
Trigger: ATCTGCTGCCTTCACCTTCCAAAGTGCTGGGATTAC...TGGCCTTGGCAGCTTAAGATGGCAGAGGCTTTGGAGTCTTCTTAGGACTGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CAA 72 bp TTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTaGAGGTTTGATTGGCTGAACGCACGTGGAACATCA +
Preference number: 4 (lower is better)
Translates to: LPKTQPHCSITF*RFDWLNARGTS
Trigger: TGATGTTCCACGTGCGTTCAGCCAATCAAACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCCAATTTCGTTGGTGTTaGTGTACATGTCTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEAQFRWC*CTCLGR
Trigger: TCTGCCCAGACATGTACATCAACACCAACGAAATTG...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGCCAAGCACACCCTGGTaGGTTGCTTCTTCAGGCTTT +
Preference number: 4 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGPSTPW*VASSGF
Trigger: AAAGCCTGAAGAAGCAACTCACCAGGGTGTGCTTGG...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAAGGAGTGTTTACGTTCCTaGAAGCTGATGCTTTATTAT +
Preference number: 4 (lower is better)
Translates to: QRGWVGGGLCYAVLDSGKECLRS*KLMLYY
Trigger: ATAATAAAGCATCAGCTTTCAGGAACGTAAACACTC...CTTCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CTTACAGTCCTAAGAAGACTCCAAAGCCTCTGCCATCTTAAGCTGCCAAGGCCAAACTCACAGCTCTCATaGAAAGTTTGTGAACCCCAC +
Preference number: 4 (lower is better)
Translates to: LTVLRRLQSLCHLKLPRPNSQLS*KVCEPH
Trigger: GTGGGGTTCACAAACTTTTCATGAGAGCTGTGAGTT...TGGCCTTGGCAGCTTAAGATGGCAGAGGCTTTGGAGTCTTCTTAGGACTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp TTCATGTTTCCAAGCAAGAATCATGGGTTGGGGAAGGCAAGTGTTTACTGTGGTTCTTTCAGGCTTTGTTaGGCCCCAGGTGGAGCTGAT +
Preference number: 4 (lower is better)
Translates to: FMFPSKNHGLGKASVYCGSFRLC*APGGAD
Trigger: ATCAGCTCCACCTGGGGCTCAACAAAGCCTGAAAGA...ACCACAGTAAACACTTGCCTTCCCCAACCCATGATTCTTGCTTGGAAACATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACACCTCTCGTCCTGCCATaGAGTGGAAGAAGAACTCAG +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETPLVLP*SGRRTQ
Trigger: CTGAGTTCTTCTTCCACTGCATGGCAGGACGAGAGG...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACAACCAGCCCCTCTAGGTaGTTGATGATGCACCTTTGG +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETTSPSR*LMMHLW
Trigger: CCAAAGGTGCATCATCAAGCACCTAGAGGGGCTGGT...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GTAAACCTTGATAAAAATCCAGAGACAGGGAGGGGCAAGGATGAGCAACTCTGTTTATCACCTCGTAGTTaGTGGCCAGGAAGGGGAACT +
Preference number: 4 (lower is better)
Translates to: VNLDKNPETGRGKDEQLCLSPRS*WPGRGT
Trigger: AGTTCCCCTTCCTGGCCAGCAACTACGAGGTGATAA...ACAGAGTTGCTCATCCTTGCCCCTCCCTGTCTCTGGATTTTTATCAAGGTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGCCCAGCATGGTGGCTTaGTTCAGAAACTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGPSMVA*FRNWKL
Trigger: CAGCTTCCAGTTTCTGAAGCAAGCCACCATGCTGGG...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp TTCATGTTTCCAAGCAAGAATCATGGGTTGGGGAAGGCAAGTGTTTACTGTGGTTGCTATCTCAGAGGCTaGTTGAGCTCGAACAGGCCT +
Preference number: 4 (lower is better)
Translates to: FMFPSKNHGLGKASVYCGCYLRG*LSSNRP
Trigger: AGGCCTGTTCGAGCTCAAGCAGCCTCTGAGATAGCA...ACCACAGTAAACACTTGCCTTCCCCAACCCATGATTCTTGCTTGGAAACATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp AGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGAGCCTGGGTAACAAGTaGAAAAGTGCATCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: REKPGNLFNRPSSDLGSMSLGNK*KSASQK
Trigger: TTTTTGAGATGCACTTTTGCACTTGTTACCCAGGCT...CATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCATCTTAAGATCCTACTaGAGAAACCTAGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEAILRSY*RNLGPV
Trigger: CACTGGCCCTAGGTTTCTGCAGTAGGATCTTAAGAT...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp TTCATGTTTCCAAGCAAGAATCATGGGTTGGGGAAGGCAAGTGTTTACTGTGGTCAGCTTTACTGCACGTaGACTCACTTGAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: FMFPSKNHGLGKASVYCGQLYCT*THLRAE
Trigger: CTCTGCCCTCAAGTGAGTGCACGTGCAGTAAAGCTG...ACCACAGTAAACACTTGCCTTCCCCAACCCATGATTCTTGCTTGGAAACATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp CTTACAGTCCTAAGAAGACTCCAAAGCCTCTGCCATCTTAAGCTGCCAAGGCCAGTGGTAGGACAGCGATaGTGCTTAAAGAACTTAAGG +
Preference number: 4 (lower is better)
Translates to: LTVLRRLQSLCHLKLPRPVVGQR*CLKNLR
Trigger: CCTTAAGTTCTTTAAGCAGCATCGCTGTCCTACCAC...TGGCCTTGGCAGCTTAAGATGGCAGAGGCTTTGGAGTCTTCTTAGGACTGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp TTCATGTTTCCAAGCAAGAATCATGGGTTGGGGAAGGCAAGTGTTTACTGTGGTTCAAGGTTGGATGGATaGAGCATGGGGGAGGGAATG +
Preference number: 4 (lower is better)
Translates to: FMFPSKNHGLGKASVYCGSRLDG*SMGEGM
Trigger: CATTCCCTCCCCCATGCTGCATCCATCCAACCTTGA...ACCACAGTAAACACTTGCCTTCCCCAACCCATGATTCTTGCTTGGAAACATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp TTCATGTTTCCAAGCAAGAATCATGGGTTGGGGAAGGCAAGTGTTTACTGTGGTCAGAGCTCAGTGTCTTaGCCAAAACGCAGCCTCACT +
Preference number: 4 (lower is better)
Translates to: FMFPSKNHGLGKASVYCGQSSVS*PKRSLT
Trigger: AGTGAGGCTGCGTTTTGGGCAAGACACTGAGCTCTG...ACCACAGTAAACACTTGCCTTCCCCAACCCATGATTCTTGCTTGGAAACATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GTAAACCTTGATAAAAATCCAGAGACAGGGAGGGGCAAGGATGAGCAACTCTGTGTTATACACTGTGAGTaGGAGCTCAATGTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VNLDKNPETGRGKDEQLCVIHCE*ELNVAQ
Trigger: CTGGGCCACATTGAGCTCCCACTCACAGTGTATAAC...ACAGAGTTGCTCATCCTTGCCCCTCCCTGTCTCTGGATTTTTATCAAGGTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCCCATTAGTAAACATCTaGTCTCCTAGGCGACTGACT +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEAPLVNI*SPRRLT
Trigger: AGTCAGTCGCCTAGGAGACCAGATGTTTACTAATGG...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACATGGATTCCAGTCTCCTaGTCCTCTCATGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETWIPVS*SSHAEG
Trigger: GCCTTCTGCATGAGAGGACCAGGAGACTGGAATCCA...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACAGAACTACATCCTTCATaGCAGCCTGCAAGTTCACCG +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETELHPS*QPASSP
Trigger: CGGTGAACTTGCAGGCTGTCATGAAGGATGTAGTTC...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCGGTTCACTTCCTCCTTaGACTTCAGATCAATCATGT +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEAGSLPP*TSDQSC
Trigger: ACATGATTGATCTGAAGTTCAAGGAGGAAGTGAACC...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCAGAGTGTTTACGTTCCTaGAAGCTGATGCTTTATTAT +
Preference number: 4 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQAECLRS*KLMLYY
Trigger: ATAATAAAGCATCAGCTTTCAGGAACGTAAACACTC...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp AGGAATCTTGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTATTAGTCCATGTTCTTaGATCCATCCATCAGATTTG +
Preference number: 4 (lower is better)
Translates to: RNLVCCPWPLTAKEPRFPISPCS*IHPSDL
Trigger: CAAATCTGATGGATGGATTCAAGAACATGGACTAAT...AGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTCTCATGAAAAGTTTGTaGACCCCACCAGATGATCAA +
Preference number: 4 (lower is better)
Translates to: AQCLAQNAASLLNHILEVLMKSL*TPPDDQ
Trigger: TTGATCATCTGGTGGGGTTCACAAACTTTTCATGAG...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACATTACTGTGGTCCAGCTaGGGACTGTGGTGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETLLWSS*GLWCLK
Trigger: TTTCAGACACCACAGTCCTCAGCTGGACCACAGTAA...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp CTTTTCTGTCCATGCCAGGGAAATGTATTGCTGGTGCTAGAGGGAGAGGAAACGCCCAGGAGGTTGTTCTaGACAATTTCAGTTGTGTAT +
Preference number: 4 (lower is better)
Translates to: LFCPCQGNVLLVLEGEETPRRLF*TISVVY
Trigger: ATACACAACTGAAATTGTGCAGAACAACCTCCTGGG...CGTTTCCTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCATGGACAGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp CTTTACATGTGCGCCCTGGGACCCCAGGAGGTTGTTCTGCACAATTTCAGTTGTCTTAGCATTCATATGTaGCTTCCAGAAGAGAGCAAT +
Preference number: 4 (lower is better)
Translates to: LYMCALGPQEVVLHNFSCLSIHM*LPEESN
Trigger: ATTGCTCTCTTCTGGAAGGCACATATGAATGCTAAG...ACAACTGAAATTGTGCAGAACAACCTCCTGGGGTCCCAGGGCGCACATGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409024.3
CDS-3UTR GCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACATTATCACCTCGTAGTTaGTGGCCAGGAAGGGGAACT +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETLSPRS*WPGRGT
Trigger: AGTTCCCCTTCCTGGCCAGCAACTACGAGGTGATAA...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR GCA 90 bp GTAAACCTTGATAAAAATCCAGAGACAGGGAGGGGCAAGGATGAGCAACTCTGTCTGCTCATCAGGATGTaGAAGCTCCCAAATGTCTGT +
Preference number: 4 (lower is better)
Translates to: VNLDKNPETGRGKDEQLCLLIRM*KLPNVC
Trigger: ACAGACATTTGGGAGCTTGCACATCCTGATGAGCAG...ACAGAGTTGCTCATCCTTGCCCCTCCCTGTCTCTGGATTTTTATCAAGGTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACACCATTGAGTCCAACTTaGGCGAAGATAGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETPLSPT*AKIVTG
Trigger: CCCAGTGACTATCTTCGCGCAAGTTGGACTCAATGG...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACAGTTATACACTGTGAGTaGGAGCTCAATGTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETVIHCE*ELNVAQ
Trigger: CTGGGCCACATTGAGCTCCCACTCACAGTGTATAAC...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTATACAGAAGGACTCCTaGACGTCAATTTTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: AQCLAQNAASLLNHILEVIQKDS*TSIFCN
Trigger: GTTGCAGAAAATTGACGTCCAGGAGTCCTTCTGTAT...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGCAATGCCATACGTGTTaGCTATGGCGTGGATGTCGT +
Preference number: 4 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGQCHTC*LWRGCR
Trigger: ACGACATCCACGCCATAGCCAACACGTATGGCATTG...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCAAATAAAATCAGAATCTaGGCAAGGCCTTGGGATCAA +
Preference number: 4 (lower is better)
Translates to: EDGELACLGQKTTSSVRANKIRI*ARPWDQ
Trigger: TTGATCCCAAGGCCTTGCCCAGATTCTGATTTTATT...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CAA 72 bp CCTCAGATATCTGTATATCCATGTTCACAGCGTTATTaGCAACAGCCAAGAGGTGGAGGCAACCCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: PQISVYPCSQRY*QQPRGGGNPSV
Trigger: GACACTTGGGTTGCCTCCACCTCTTGGCTGTTGCAAATAACGCTGTGAACATGGATATACAGATATCTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp TTTAAAAACCAGACATGCTGTCTTAATACTCATCCATCAGGAAAGACACAGGAACTCAAAGCAGGGCAGTaGCTTGCCAGACGCCATCAG +
Preference number: 4 (lower is better)
Translates to: FKNQTCCLNTHPSGKTQELKAGQ*LARRHQ
Trigger: CTGATGGCGTCTGGCAAGTCACTGCCCTGCTTTGAG...TTCCTGTGTCTTTCCTGATGGATGAGTATTAAGACAGCATGTCTGGTTTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GTAAACCTTGATAAAAATCCAGAGACAGGGAGGGGCAAGGATGAGCAACTCTGTATAGCTCTGGGAGGTTaGTTCCTTCTGTGTTTAGCA +
Preference number: 4 (lower is better)
Translates to: VNLDKNPETGRGKDEQLCIALGG*FLLCLA
Trigger: TGCTAAACACAGAAGGAATCAACCTCCCAGAGCTAT...ACAGAGTTGCTCATCCTTGCCCCTCCCTGTCTCTGGATTTTTATCAAGGTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACAATGCTACGCTGTACTTaGCTCAGGGAAGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETMLRCT*LREEVL
Trigger: CAAGACTTCTTCCCTGAGTCAAGTACAGCGTAGCAT...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTGTGTCCACCAACAGATaGGTGATTAAACAAAATACG +
Preference number: 4 (lower is better)
Translates to: AQCLAQNAASLLNHILEVVSTNR*VIKQNT
Trigger: CGTATTTTGTTTAATCACTCATCTGTTGGTGGACAC...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCCTTAGCATTCATATGTaGCTTCCAGAAGAGAGCAAT +
Preference number: 4 (lower is better)
Translates to: FSVNRESGLLLRGYATEALSIHM*LPEESN
Trigger: ATTGCTCTCTTCTGGAAGGCACATATGAATGCTAAG...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CTTTTCTGTCCATGCCAGGGAAATGTATTGCTGGTGCTAGAGGGAGAGGAAACGTCAGAAACTGGAAGCTaGTTTCAAATGTCATCTGCT +
Preference number: 4 (lower is better)
Translates to: LFCPCQGNVLLVLEGEETSETGS*FQMSSA
Trigger: AGCAGATGACATTTGAAACCAGCTTCCAGTTTCTGA...CGTTTCCTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCATGGACAGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCAGGAGTTAGTGCTCAATaGATACAGACATTTGTACAT +
Preference number: 4 (lower is better)
Translates to: EDGELACLGQKTTSSVRAGVSAQ*IQTFVH
Trigger: ATGTACAAATGTCTGTATCCATTGAGCACTAACTCC...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CTTTTCTGTCCATGCCAGGGAAATGTATTGCTGGTGCTAGAGGGAGAGGAAACGATTGTTGTACACCGTTaGTGGGAACATAAAATGGTG +
Preference number: 4 (lower is better)
Translates to: LFCPCQGNVLLVLEGEETIVVHR*WEHKMV
Trigger: CACCATTTTATGTTCCCACCAACGGTGTACAACAAT...CGTTTCCTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCATGGACAGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACAATGAAGACGGTGAACTaGCTTGTTTGGGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETMKTVN*LVWGRR
Trigger: TCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTCAT...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp GTAAACCTTGATAAAAATCCAGAGACAGGGAGGGGCAAGGATGAGCAACTCTGTGGTTCACTTCCTCCTTaGACTTCAGATCAATCATGT +
Preference number: 4 (lower is better)
Translates to: VNLDKNPETGRGKDEQLCGSLPP*TSDQSC
Trigger: ACATGATTGATCTGAAGTTCAAGGAGGAAGTGAACC...ACAGAGTTGCTCATCCTTGCCCCTCCCTGTCTCTGGATTTTTATCAAGGTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp TGCACCATGGCTGGAAACGTGATAGTCAACTTGCTGTTGTGTTCCTTTCGGACATTTTCTTCCAGAAATTaGGCTCTTCAGCCGAATACA +
Preference number: 4 (lower is better)
Translates to: CTMAGNVIVNLLLCSFRTFSSRN*ALQPNT
Trigger: TGTATTCGGCTGAAGAGCTCAATTTCTGGAAGAAAA...TGTCCGAAAGGAACACAACAGCAAGTTGACTATCACGTTTCCAGCCATGGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR GCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACAAAAACGCAGCCTCACTaGTCAATCACATTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETKTQPH*SITFLR
Trigger: CCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTT...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp TTTAAAAACCAGACATGCTGTCTTAATACTCATCCATCAGGAAAGACACAGGAAGCTTCTCCTTGCGTTTaGCATCAGAGGCATCGGCGT +
Preference number: 4 (lower is better)
Translates to: FKNQTCCLNTHPSGKTQEASPCV*HQRHRR
Trigger: ACGCCGATGCCTCTGATGCCAAACGCAAGGAGAAGC...TTCCTGTGTCTTTCCTGATGGATGAGTATTAAGACAGCATGTCTGGTTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGGTGAACTGGCTTGTTTaGGGCAGAAGACTACAAGTT +
Preference number: 4 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGVNWLV*GRRLQV
Trigger: AACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCAC...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACATTGGCTGAACGCACGTaGAACATCAGGTTCATGTTT +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETLAERT*NIRFMF
Trigger: AAACATGAACCTGATGTTCCACGTGCGTTCAGCCAA...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACATATCAAACACAATATTaGCGTGGCTCTGAAGGCGAA +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETYQTQY*RGSEGE
Trigger: TTCGCCTTCAGAGCCACGTCAATATTGTGTTTGATA...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACATGGGATGTGGTCCTCTaGGATTATATTTATGAGCAG +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETWDVVL*DYIYEQ
Trigger: CTGCTCATAAATATAATCCCAGAGGACCACATCCCA...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACACGCAGCTGGTACACCTaGAATTTGTTCTGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETRSWYT*NLFCFS
Trigger: AGAAAAACAGAACAAATTCCAGGTGTACCAGCTGCG...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACAGCTTGCTTCAGAAACTaGAAGCTGGTTTCAAATGTC +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETACFRN*KLVSNV
Trigger: GACATTTGAAACCAGCTTCCAGTTTCTGAAGCAAGC...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp TTTAAAAACCAGACATGCTGTCTTAATACTCATCCATCAGGAAAGACACAGGAATCAGGGAAGAAGTCTTaGTGGGGACTCTTTGTGGAC +
Preference number: 4 (lower is better)
Translates to: FKNQTCCLNTHPSGKTQESGKKS*WGLFVD
Trigger: GTCCACAAAGAGTCCCCATCAAGACTTCTTCCCTGA...TTCCTGTGTCTTTCCTGATGGATGAGTATTAAGACAGCATGTCTGGTTTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACATACATAAAAGGAAACTaGAGTGCATTTCTTAGGGTC +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETYIKGN*SAFLRV
Trigger: GACCCTAAGAAATGCACTTCAGTTTCCTTTTATGTA...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR GCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACAGGTCACAAAAAGACATaGTGTACTTTTCCACTTGTA +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETGHKKT*CTFPLV
Trigger: TACAAGTGGAAAAGTACAGCATGTCTTTTTGTGACC...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp TTTAAAAACCAGACATGCTGTCTTAATACTCATCCATCAGGAAAGACACAGGAACCTGTGCACCATGGCTaGAAACGTGATAGTCAACTT +
Preference number: 4 (lower is better)
Translates to: FKNQTCCLNTHPSGKTQEPVHHG*KRDSQL
Trigger: AAGTTGACTATCACGTTTCCAGCCATGGTGCACAGG...TTCCTGTGTCTTTCCTGATGGATGAGTATTAAGACAGCATGTCTGGTTTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp TTTAAAAACCAGACATGCTGTCTTAATACTCATCCATCAGGAAAGACACAGGAATGCAAGTTCACCGTCTaGCCATTAGTAAACATCTGG +
Preference number: 4 (lower is better)
Translates to: FKNQTCCLNTHPSGKTQECKFTV*PLVNIW
Trigger: CCAGATGTTTACTAATGGCCAGACGGTGAACTTGCA...TTCCTGTGTCTTTCCTGATGGATGAGTATTAAGACAGCATGTCTGGTTTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CCA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACACTGGATAAAACTTCATaGAGATGCTGTGATTTCATT +
Preference number: 4 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETLDKTS*RCCDFI
Trigger: AATGAAATCACAGCATCTCCATGAAGTTTTATCCAG...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR TCA 90 bp TTTAAAAACCAGACATGCTGTCTTAATACTCATCCATCAGGAAAGACACAGGAAAGGATGTGGAGAAATTaGAATTGTTGTACACCGTTG +
Preference number: 4 (lower is better)
Translates to: FKNQTCCLNTHPSGKTQERMWRN*NCCTPL
Trigger: CAACGGTGTACAACAATTTCAATTTCTCCACATCCT...TTCCTGTGTCTTTCCTGATGGATGAGTATTAAGACAGCATGTCTGGTTTTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR TCA 90 bp TTTAAAAACCAGACATGCTGTCTTAATACTCATCCATCAGGAAAGACACAGGAATGTAAGTTGAGGGCTTaGGATTCCAAGAAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: FKNQTCCLNTHPSGKTQECKLRA*DSKKSL
Trigger: AAGACTTTTCTTGGAATCTCAAGCCCTCAACTTACA...TTCCTGTGTCTTTCCTGATGGATGAGTATTAAGACAGCATGTCTGGTTTTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263857.11
3UTR CAA 72 bp ACTATTAACAAGAACAAGGATGTGGAGAAATTGAAATaGTTGTACACCGTTGGTGGGAACATAAAATGGTGT +
Preference number: 4 (lower is better)
Translates to: TINKNKDVEKLK*LYTVGGNIKWC
Trigger: ACACCATTTTATGTTCCCACCAACGGTGTACAACAATTTCAATTTCTCCACATCCTTGTTCTTGTTAATAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS CCA 90 bp GCCCCCGTGGCTGGGGTCAGAAGCTGCTTGGCCACGGCCTCTCGCTaGGTCATGTCCACAGCGCTCAGGGCTGTGCGGCTGCCGTCCTCA +
Preference number: 5 (lower is better)
Translates to: APVAGVRSCLATASR*VMSTALRAVRLPSS
Trigger: TGAGGACGGCAGCCGCACAGCCCTGAGCGCTGTGGACATGACCCAGCGAGAGGCCGTGGCCAAGCAGCTTCTGACCCCAGCCACGGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000683266.1
ENST00000684556.1
CDS-3UTR CAA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTCGATTCAACGTGCGCTaGCGCGCGGAAGCGGTCGCA +
Preference number: 5 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGRFNVR*RAEAVA
Trigger: TGCGACCGCTTCCGCGCGCAAGCGCACGTTGAATCG...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409681.1
CDS GCA 90 bp GCAGCCAGCAGGCCCACAGCCTCGCCCGGCTCACACAGTGAGCGCTaGCACTTCAGCTGCAGCAAGGTCCTCAACCTGTCGAGAGAAAGC +
Preference number: 5 (lower is better)
Translates to: AASRPTASPGSHSER*HFSCSKVLNLSRES
Trigger: GCTTTCTCTCGACAGGTTGAGGACCTTGCTGCAGCTGAAGTGGCAGCGCTCACTGTGTGAGCCGGGCGAGGCTGTGGGCCTGCTGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS GCA 90 bp TTGGAGCTGGGCAGATGGTGCCGGGGTAGCTGCTATCTCAGAGGCTaGTTGAGCTCGAACAGGCCTGTCCCGCCCCTGACGACCTTCCCG +
Preference number: 5 (lower is better)
Translates to: LELGRWCRGSCYLRG*LSSNRPVPPLTTFP
Trigger: CGGGAAGGTCGTCAGGGGCGGGACAGGCCTGTTCGAGCTCAAGCAGCCTCTGAGATAGCAGCTACCCCGGCACCATCTGCCCAGCTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS GCA 90 bp CCTCACCAAGGGTCCTTGGAGCTGGGCAGATGGTGCCGGGGTAGCTaGTATCTCAGAGGCTGCTTGAGCTCGAACAGGCCTGTCCCGCCC +
Preference number: 5 (lower is better)
Translates to: PHQGSLELGRWCRGS*YLRGCLSSNRPVPP
Trigger: GGGCGGGACAGGCCTGTTCGAGCTCAAGCAGCCTCTGAGATAGCAGCTACCCCGGCACCATCTGCCCAGCTCCAAGGACCCTTGGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTAAGCAGGGCAGTGACTaGCCAGACGCCATCAGCGGG +
Preference number: 5 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGKQGSD*PDAISG
Trigger: CCCGCTGATGGCGTCTGGCAAGTCACTGCCCTGCTT...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS GCA 90 bp CCACGTGTCGGGGAGCTTCCTCCTAGGGATGGGCTCCTGTGTCAGTaGGCACCGGAGCCACACCTGATGGCCACCAATCACCAGAATCCG +
Preference number: 5 (lower is better)
Translates to: PRVGELPPRDGLLCQ*APEPHLMATNHQNP
Trigger: CGGATTCTGGTGATTGGTGGCCATCAGGTGTGGCTCCGGTGCGCACTGACACAGGAGCCCATCCCTAGGAGGAAGCTCCCCGACACGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684556.1
CDS CCA 90 bp TCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTCCTTaGAGCTGGGCAGATGGTGCCGGGGTAGCTGCTATCTCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: SHAEGRLGHALTKGP*SWADGAGVAAISEA
Trigger: AGCCTCTGAGATAGCAGCTACCCCGGCACCATCTGCCCAGCTCCAAGGACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AGGCCCGGGGCTGGCTTGGCTCCCGTGAAAACACTGCAGCGGGCAGCCAGTCCGGCATCGTGTTCACAGTaGAACCTTTGGCTCCCGACT +
Preference number: 5 (lower is better)
Translates to: RPGAGLAPVKTLQRAASPASCSQ*NLWLPT
Trigger: AGTCGGGAGCCAAAGGTTCAACTGTGAACACGATGC...CGGACTGGCTGCCCGCTGCAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTCCCAACTCCCCAGCGTaGTCCAGATCCCGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGPNSPA*SRSRCV
Trigger: TACACAGCGGGATCTGGACAACGCTGGGGAGTTGGG...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS TCA 90 bp CCTGGCACCACAGGCTCTCCTCGGTGTCGTACTGGTAGTCATCTATaGACGGGTGGATCTCACGCACAGCCTGGACCCGGCGCTCCATGG +
Preference number: 5 (lower is better)
Translates to: PGTTGSPRCRTGSHL*TGGSHAQPGPGAPW
Trigger: CCATGGAGCGCCGGGTCCAGGCTGTGCGTGAGATCCACCCGTTCATAGATGACTACCAGTACGACACCGAGGAGAGCCTGTGGTGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS TCA 90 bp CTCCTAGGGATGGGCTCCTGTGTCAGTGCGCACCGGAGCCACACCTaGTGGCCACCAATCACCAGAATCCGAACAGGAGCCGGATGGGTC +
Preference number: 5 (lower is better)
Translates to: LLGMGSCVSAHRSHT*WPPITRIRTGAGWV
Trigger: GACCCATCCGGCTCCTGTTCGGATTCTGGTGATTGGTGGCCATCAGGTGTGGCTCCGGTGCGCACTGACACAGGAGCCCATCCCTAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684556.1
CDS CCA 90 bp AGCCGCAGCACTTTCTCTTCAGGCAGGATGCGGGCACGGTGGGCCTaGATGGAGGGTCTGTGCAGTGTGGGCTGTCGGTTCAGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: SRSTFSSGRMRARWA*MEGLCSVGCRFSSR
Trigger: TCTGCTACTGAACCGACAGCCCACACTGCACAGACCCTCCATCCAGGCCCACCGTGCCCGCATCCTGCCTGAAGAGAAAGTGCTGCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000683266.1
CDS CCA 90 bp CCACCTTGTGATGGGCCTGGCAGACAGCGGGACTGTCGCAGCGGCTaGAGTCTGAGAACCCGGACTGTCTACCCAAGGCTGCCTATTTGC +
Preference number: 5 (lower is better)
Translates to: PPCDGPGRQRDCRSG*SLRTRTVYPRLPIC
Trigger: GCAAATAGGCAGCCTTGGGTAGACAGTCCGGGTTCTCAGACTCCAGCCGCTGCGACAGTCCCGCTGTCTGCCAGGCCCATCACAAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS-3UTR CAA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGACGGATCGCCCGGTCTaGCAGTGGGGACAGCGCTTA +
Preference number: 5 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLTDRPV*QWGQRL
Trigger: TAAGCGCTGTCCCCACTGCAAGACCGGGCGATCCGT...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AGGGGCTCAGAGTCCTTCTGGCCAGCTGTCCTGTGCACCATGGCTGGAAACGTGACGGATCGCCCGGTCTaGCAGTGGGGACAGCGCTTA +
Preference number: 5 (lower is better)
Translates to: RGSESFWPAVLCTMAGNVTDRPV*QWGQRL
Trigger: TAAGCGCTGTCCCCACTGCAAGACCGGGCGATCCGT...CACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCAGAAGGACTCTGAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409024.3
CDS-3UTR CAA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTTGCAGGAACTGTGTCTaGGGGATGTCCAGGCCATCC +
Preference number: 5 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGCRNCV*GMSRPS
Trigger: GGATGGCCTGGACATCCCCAAGACACAGTTCCTGCA...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GGGAGAGGAAACGTGGACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAAGGAAGGGGAACTGCTaGGGCTGCAGGAACTGTGTC +
Preference number: 5 (lower is better)
Translates to: GRGNVDGQEQGGTVLWAGRKGNC*GCRNCV
Trigger: GACACAGTTCCTGCAGCCCAAGCAGTTCCCCTTCCT...TCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGTCCACGTTTCCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GGGAGAGGAAACGTGGACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGACCAGGGCTGCGGCCATaGCGGTTTTCACTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: GRGNVDGQEQGGTVLWAGPGLRP*RFSLSS
Trigger: ACTTGAGAGTGAAAACCGCAATGGCCGCAGCCCTGG...TCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGTCCACGTTTCCTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTCCAGGGCTGCGGCCATaGCGGTTTTCACTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGPGLRP*RFSLSS
Trigger: ACTTGAGAGTGAAAACCGCAATGGCCGCAGCCCTGG...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGGAGCCCCCAGGAATCTaGTCTGTTGTCCCTGGCCAC +
Preference number: 5 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQEPPGI*SVVPGH
Trigger: GTGGCCAGGGACAACAGACAAGATTCCTGGGGGCTC...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTCTCTGTGCCCATGCCTaGGTGAACCTGGCAGACCCC +
Preference number: 5 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGLCAHA*VNLADP
Trigger: GGGGTCTGCCAGGTTCACCAAGGCATGGGCACAGAG...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS TCA 90 bp GTGATGGGCCTGGCAGACAGCGGGACTGTCGCAGCGGCTGGAGTCTaGGAACCCGGACTGTCTACCCAAGGCTGCCTATTTGCATCCAGA +
Preference number: 5 (lower is better)
Translates to: VMGLADSGTVAAAGV*EPGLSTQGCLFASR
Trigger: TCTGGATGCAAATAGGCAGCCTTGGGTAGACAGTCCGGGTTCTCAGACTCCAGCCGCTGCGACAGTCCCGCTGTCTGCCAGGCCCATCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS CCA 90 bp TCTCGATCACCCGCAGCGCGGCCTCAATGCCATACGTGTTGGCTATaGCGTGGATGTCGTTGGAGTAGAGGCGGCGCAGATCCAGGACCT +
Preference number: 5 (lower is better)
Translates to: SRSPAARPQCHTCWL*RGCRWSRGGADPGP
Trigger: AGGTCCTGGATCTGCGCCGCCTCTACTCCAACGACATCCACGCCATAGCCAACACGTATGGCATTGAGGCCGCGCTGCGGGTGATCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000471427.1
CDS-3UTR CAA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTAATCGTACAGGCCGTTaGCCGATGGGTTCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGNRTGR*PMGSPG
Trigger: GCCTGGGGAACCCATCGGCAAACGGCCTGTACGATT...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTGCAGGCTGGGTCCTATaGCATGGATGTAGGGAGCAA +
Preference number: 5 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGAGWVL*HGCREQ
Trigger: TTGCTCCCTACATCCATGCAATAGGACCCAGCCTGC...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCGACGGGGTCTCACTCTaGTCACCCGAGCTGGAGTGC +
Preference number: 5 (lower is better)
Translates to: LSLATHSKRTPLPYSGGADGVSL*SPELEC
Trigger: GCACTCCAGCTCGGGTGACAAGAGTGAGACCCCGTC...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS CCA 90 bp CAGGGCTGTGCGGCTGCCGTCCTCATTGATGACCATGGAGGCTCCTaGGTGCACATTAGGGCCGTTGATGACCGCTTGCCTAAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: QGCAAAVLIDDHGGS*VHIRAVDDRLPKFL
Trigger: CAGGAACTTAGGCAAGCGGTCATCAACGGCCCTAATGTGCACCCAGGAGCCTCCATGGTCATCAATGAGGACGGCAGCCGCACAGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000683266.1
ENST00000684556.1
CDS CCA 90 bp TGCTGGCCAGGAAGGGGAACTGCTTGGGCTGCAGGAACTGTGTCTTaGGGATGTCCAGGCCATCCTCCCCATACAGGAACTGCACCACAC +
Preference number: 5 (lower is better)
Translates to: CWPGRGTAWAAGTVS*GCPGHPPHTGTAPH
Trigger: GTGTGGTGCAGTTCCTGTATGGGGAGGATGGCCTGGACATCCCCAAGACACAGTTCCTGCAGCCCAAGCAGTTCCCCTTCCTGGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CCA 90 bp TCTCCTTCTCGATCACCCGCAGCGCGGCCTCAATGCCATACGTGTTaGCTATGGCGTGGATGTCGTTGGAGTAGAGGCGGCGCAGATCCA +
Preference number: 5 (lower is better)
Translates to: SPSRSPAARPQCHTC*LWRGCRWSRGGADP
Trigger: TGGATCTGCGCCGCCTCTACTCCAACGACATCCACGCCATAGCCAACACGTATGGCATTGAGGCCGCGCTGCGGGTGATCGAGAAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000471427.1
CDS CCA 90 bp GCGCGGCCTCAATGCCATACGTGTTGGCTATGGCGTGGATGTCGTTaGAGTAGAGGCGGCGCAGATCCAGGACCTGGAGAGAGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: ARPQCHTCWLWRGCR*SRGGADPGPGERKE
Trigger: TTCCTTCCTCTCTCCAGGTCCTGGATCTGCGCCGCCTCTACTCCAACGACATCCACGCCATAGCCAACACGTATGGCATTGAGGCCGCGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471427.1
CDS-3UTR CAA 90 bp CAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCTGCAGCACAGGTGAGGCGGCTGCCGTCCTCATaGATGACCATGGAGGCTCCT +
Preference number: 5 (lower is better)
Translates to: QDFSLGVMPQRPPAAQVRRLPSS*MTMEAP
Trigger: AGGAGCCTCCATGGTCATCAATGAGGACGGCAGCCG...CCTCACCTGTGCTGCAGGAGGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCCGGCTGCCGTCCTCATaGATGACCATGGAGGCTCCT +
Preference number: 5 (lower is better)
Translates to: LSLATHSKRTPLPYSGGARLPSS*MTMEAP
Trigger: AGGAGCCTCCATGGTCATCAATGAGGACGGCAGCCG...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGGGGGTCAGAAGCTGCTaGGCCACGGCCTCTCGCTGG +
Preference number: 5 (lower is better)
Translates to: REKPGNLFNRPSSDLGSMGVRSC*ATASRW
Trigger: CCAGCGAGAGGCCGTGGCCAAGCAGCTTCTGACCCC...CATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCAGGCAGGTTAGAACCTaGCCGCTGGTCTCGCCTCCA +
Preference number: 5 (lower is better)
Translates to: LSLATHSKRTPLPYSGGARQVRT*PLVSPP
Trigger: TGGAGGCGAGACCAGCGGCAAGGTTCTAACCTGCCT...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGAAATCCCTCTGGTCCTaGCCCAGATGGGCATCCTGC +
Preference number: 5 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQKSLWS*PRWASC
Trigger: GCAGGATGCCCATCTGGGCAAGGACCAGAGGGATTT...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCTTCACAGTTGAACCTTaGGCTCCCGACTGCACCATC +
Preference number: 5 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSFTVEP*APDCTI
Trigger: GATGGTGCAGTCGGGAGCCAAAGGTTCAACTGTGAA...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTGCATCGTGTTCACAGTaGAACCTTTGGCTCCCGACT +
Preference number: 5 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGASCSQ*NLWLPT
Trigger: AGTCGGGAGCCAAAGGTTCAACTGTGAACACGATGC...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTGCTCTGTACTGTCACTaGGAACTGCCCTGGATTCCA +
Preference number: 5 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGALYCH*ELPWIP
Trigger: TGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGC...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS TCA 90 bp GTGAACGGGAATAAGCACTGGCTGTGGAGGAGAGGGGTGGCCAAGTaGGGGCGCCTTTGTAGGAGGAGCCTGGTTACTTCCCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: VNGNKHWLWRRGVAK*GRLCRRSLVTSQLL
Trigger: AAGGAGCTGGGAAGTAACCAGGCTCCTCCTACAAAGGCGCCCTCACTTGGCCACCCCTCTCCTCCACAGCCAGTGCTTATTCCCGTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683266.1
CDS-3UTR CAA 90 bp ATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCTCCTCCAGGTCCGTTTaGAATTCCGACACCCCAAGA +
Preference number: 5 (lower is better)
Translates to: IPVSWSSHAEGRLGHALTSSRSV*NSDTPR
Trigger: TCTTGGGGTGTCGGAATTCAAAACGGACCTGGAGGA...GGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGCGCCAGGGCATGTTCTaGGAGATCAACATCCTCCAG +
Preference number: 5 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQRQGMF*EINILQ
Trigger: CTGGAGGATGTTGATCTCCAAGAACATGCCCTGGCG...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAAATCGTACAGGCCGTTaGCCGATGGGTTCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: GREVGWVEDYATLYLTQGNRTGR*PMGSPG
Trigger: GCCTGGGGAACCCATCGGCAAACGGCCTGTACGATT...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCTGGGACCCCAGGAGGTaGTTCTGCACAATTTCAGTT +
Preference number: 5 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSWDPRR*FCTISV
Trigger: AACTGAAATTGTGCAGAACAACCTCCTGGGGTCCCA...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCGCCGTTGATGACCGCTaGCCTAAGTTCCTGAACATT +
Preference number: 5 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSAVDDR*PKFLNI
Trigger: AATGTTCAGGAACTTAGGCAAGCGGTCATCAACGGC...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGAGGCAGGTTAGAACCTaGCCGCTGGTCTCGCCTCCA +
Preference number: 5 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRRQVRT*PLVSPP
Trigger: TGGAGGCGAGACCAGCGGCAAGGTTCTAACCTGCCT...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCTGCAGCACAGGTGAGGCTCATCATGGGTGTCTaGATGTTGGCGCTGGCCACC +
Preference number: 5 (lower is better)
Translates to: QDFSLGVMPQRPPAAQVRLIMGV*MLALAT
Trigger: GGTGGCCAGCGCCAACATCAAGACACCCATGATGAG...CCTCACCTGTGCTGCAGGAGGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGGGCTTTCTTGGTGTaGAGCACGGGCACGCTCATC +
Preference number: 5 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSRAFLV*STGTLI
Trigger: GATGAGCGTGCCCGTGCTCAACACCAAGAAAGCCCT...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGCCCAACTCCCCAGCGTaGTCCAGATCCCGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQPNSPA*SRSRCV
Trigger: TACACAGCGGGATCTGGACAACGCTGGGGAGTTGGG...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGTCCTCCTGCTTCTCCTaGCGTTTGGCATCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLSSCFS*RLASEA
Trigger: TGCCTCTGATGCCAAACGCAAGGAGAAGCAGGAGGA...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAGAGCCCCCAGGAATCTaGTCTGTTGTCCCTGGCCAC +
Preference number: 5 (lower is better)
Translates to: GREVGWVEDYATLYLTQGEPPGI*SVVPGH
Trigger: GTGGCCAGGGACAACAGACAAGATTCCTGGGGGCTC...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGTGCCAGGGAAATGTATaGCTGGTGCTAGAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQCQGNV*LVLEGE
Trigger: CTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCA...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGCTCGGGAGATGGAGGTaGCAGTGGAGCCGAGATTGC +
Preference number: 5 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGLGRWR*QWSRDC
Trigger: GCAATCTCGGCTCCACTGCAACCTCCATCTCCCGAG...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp GGAGGGGCAAGGATGAGCAACTCTGTCACTTTCCAGGTGAAGCTGGCCCAGCTCGCCTCTAAGTGGACTTaGGACGGAAGTGGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: GGARMSNSVTFQVKLAQLASKWT*DGSGVE
Trigger: CTCCACCCCACTTCCGTCCAAAGTCCACTTAGAGGC...GAGCTGGGCCAGCTTCACCTGGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGTGCACGTGCACTCACTaGAGGGCAGAGATCAGATCT +
Preference number: 5 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQCTCTH*RAEIRS
Trigger: AGATCTGATCTCTGCCCTCAAGTGAGTGCACGTGCA...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp AGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGAGGCCCGGGGCTGGCTaGGCTCCCGTGAAAACACTG +
Preference number: 5 (lower is better)
Translates to: REKPGNLFNRPSSDLGSMRPGAG*APVKTL
Trigger: CAGTGTTTTCACGGGAGCCAAGCCAGCCCCGGGCCT...CATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTTGTCACCTCTTCATCTaGCTCTTGGGTCTTTCGAGC +
Preference number: 5 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGCHLFI*LLGLSS
Trigger: GCTCGAAAGACCCAAGAGCAAGATGAAGAGGTGACA...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409681.1
CDS GCA 90 bp AGGAGAGGGTTATACACTGTGAGTGGGAGCTCAATGTGGCCCAGGTaGCCAGAACAGTTGCTGAAGTCCTGCACGCAGGTGGAGCACACC +
Preference number: 5 (lower is better)
Translates to: RRGLYTVSGSSMWPR*PEQLLKSCTQVEHT
Trigger: GGTGTGCTCCACCTGCGTGCAGGACTTCAGCAACTGTTCTGGGCACCTGGGCCACATTGAGCTCCCACTCACAGTGTATAACCCTCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000684026.1
ENST00000684177.1
ENST00000684556.1
CDS GCA 90 bp GGAAGGGACGGGTCCTCCTCAGTGCCTAAGCCCACCTCTTCATCTTaGTCTTGGGTCTTTCGAGCACCTTCCCTGTGGGGATTTCGTTCC +
Preference number: 5 (lower is better)
Translates to: GRDGSSSVPKPTSSS*SWVFRAPSLWGFRS
Trigger: GGAACGAAATCCCCACAGGGAAGGTGCTCGAAAGACCCAAGAGCAAGATGAAGAGGTGGGCTTAGGCACTGAGGAGGACCCGTCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000496892.5
CDS GCA 90 bp GCCTGCTCACCCAGGGGCTCAGAGTCCTTCTGGCCAGCTGTCCTGTaGACCATGGCTGGAAACGTGATAGTCAACTTGCTGTTGTGTTCC +
Preference number: 5 (lower is better)
Translates to: ACSPRGSESFWPAVL*TMAGNVIVNLLLCS
Trigger: GGAACACAACAGCAAGTTGACTATCACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCAGAAGGACTCTGAGCCCCTGGGTGAGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS GCA 90 bp CCTTTCCATGCTCAGACCCATGTGTGTCCCCCTAATGTTCCTAGGTaGCCCCTAAGCCCAGAGCTCACACTAAGGCTGCTGCCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: PFHAQTHVCPPNVPR*PLSPELTLRLLPAA
Trigger: TGCAGCTGGCAGCAGCCTTAGTGTGAGCTCTGGGCTTAGGGGGCACCTAGGAACATTAGGGGGACACACATGGGTCTGAGCATGGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS-3UTR CAA 90 bp CTCAATTCCCAGGGGCTCAGAGTCCTTCTGGCCAGCTGTCCTGTGCACCATGGCTCCTCCAGGTCCGTTTaGAATTCCGACACCCCAAGA +
Preference number: 5 (lower is better)
Translates to: LNSQGLRVLLASCPVHHGSSRSV*NSDTPR
Trigger: TCTTGGGGTGTCGGAATTCAAAACGGACCTGGAGGA...GCCATGGTGCACAGGACAGCTGGCCAGAAGGACTCTGAGCCCCTGGGAATTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR CAA 90 bp GGAGGGGCAAGGATGAGCAACTCTGTCACTTTCCAGGTGAAGCTGGCCCAGCTCGTGGAGCACACCTCTTaGGAATCTGCAGGGCCCAAA +
Preference number: 5 (lower is better)
Translates to: GGARMSNSVTFQVKLAQLVEHTS*ESAGPK
Trigger: TTTGGGCCCTGCAGATTCCAAAGAGGTGTGCTCCAC...GAGCTGGGCCAGCTTCACCTGGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAAGGTGCCCAGAACAGTaGCTGAAGTCCTGCACGCAG +
Preference number: 5 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRRCPEQ*LKSCTQ
Trigger: CTGCGTGCAGGACTTCAGCAACTGTTCTGGGCACCT...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAGGTGCCCAGAACAGTaGCTGAAGTCCTGCACGCAG +
Preference number: 5 (lower is better)
Translates to: PVGCMGQNIGLHTKLTAERCPEQ*LKSCTQ
Trigger: CTGCGTGCAGGACTTCAGCAACTGTTCTGGGCACCT...CTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AGGAATCTTGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACGGATCGCCCGGTCTaGCAGTGGGGACAGCGCTTA +
Preference number: 5 (lower is better)
Translates to: RNLVCCPWPLTAKEPRFPTDRPV*QWGQRL
Trigger: TAAGCGCTGTCCCCACTGCAAGACCGGGCGATCCGT...AGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp ATTCCAGTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCGCCGTTGATGACCGCTaGCCTAAGTTCCTGAACATT +
Preference number: 5 (lower is better)
Translates to: IPVSWSSHAEGRLGHALTAVDDR*PKFLNI
Trigger: AATGTTCAGGAACTTAGGCAAGCGGTCATCAACGGC...GGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGACTGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCGGGGTCAGAAGCTGCTaGGCCACGGCCTCTCGCTGG +
Preference number: 5 (lower is better)
Translates to: FSVNRESGLLLRGYATEAGVRSC*ATASRW
Trigger: CCAGCGAGAGGCCGTGGCCAAGCAGCTTCTGACCCC...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CTGCTTTCAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCAGTCCCGCCAATGGTaGGCCATCCTTGGGAACAAG +
Preference number: 5 (lower is better)
Translates to: LLSGPRSLLCSVLSLGTAQSRQW*AILGNK
Trigger: CTTGTTCCCAAGGATGGCCAACCATTGGCGGGACTG...GGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGAAGCAGGGCAGTGACTaGCCAGACGCCATCAGCGGG +
Preference number: 5 (lower is better)
Translates to: REKPGNLFNRPSSDLGSMKQGSD*PDAISG
Trigger: CCCGCTGATGGCGTCTGGCAAGTCACTGCCCTGCTT...CATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTAGGAAGGGGAACTGCTaGGGCTGCAGGAACTGTGTC +
Preference number: 5 (lower is better)
Translates to: QAQGRCCALYCHLELPWIRKGNC*GCRNCV
Trigger: GACACAGTTCCTGCAGCCCAAGCAGTTCCCCTTCCT...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GGAGGGGCAAGGATGAGCAACTCTGTCACTTTCCAGGTGAAGCTGGCCCAGCTCCTTCTCAGCAGGGTGTaGGGGTGCTTGCTTTGCCAT +
Preference number: 5 (lower is better)
Translates to: GGARMSNSVTFQVKLAQLLLSRV*GCLLCH
Trigger: ATGGCAAAGCAAGCACCCCAACACCCTGCTGAGAAG...GAGCTGGGCCAGCTTCACCTGGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCTGCAGCACAGGTGAGGATGGGTGTCTTGATGTaGGCGCTGGCCACCATGAGA +
Preference number: 5 (lower is better)
Translates to: QDFSLGVMPQRPPAAQVRMGVLM*ALATMR
Trigger: TCTCATGGTGGCCAGCGCCAACATCAAGACACCCAT...CCTCACCTGTGCTGCAGGAGGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTAGGGCTTTCTTGGTGTaGAGCACGGGCACGCTCATC +
Preference number: 5 (lower is better)
Translates to: QAQGRCCALYCHLELPWIRAFLV*STGTLI
Trigger: GATGAGCGTGCCCGTGCTCAACACCAAGAAAGCCCT...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GTCTCCTGGTCCTCTCATGCAGAAGGCAGGCTGGGCCACGCCCTCACCAAGGGTGAGCTCATGTCAAAGTaGATCTTCATCAGAGGGAGC +
Preference number: 5 (lower is better)
Translates to: VSWSSHAEGRLGHALTKGELMSK*IFIRGS
Trigger: GCTCCCTCTGATGAAGATCAACTTTGACATGAGCTC...ACCCTTGGTGAGGGCGTGGCCCAGCCTGCCTTCTGCATGAGAGGACCAGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCGTAGCGGGGAAGAGTTaGACCGGATCCCAAAGCGAT +
Preference number: 5 (lower is better)
Translates to: LSLATHSKRTPLPYSGGAVAGKS*TGSQSD
Trigger: ATCGCTTTGGGATCCGGTCAAACTCTTCCCCGCTAC...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTGCTCTGTACTGTCACTaGGAACTGCCCTGGATTCCA +
Preference number: 5 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGALYCH*ELPWIP
Trigger: TGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGC...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGGCCATTGAGTCCAACTaGCGCGAAGATAGTCACTGG +
Preference number: 5 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQAIESN*REDSHW
Trigger: CCAGTGACTATCTTCGCGCAAGTTGGACTCAATGGC...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS GCA 90 bp TCCCCCAGCAGTGTGCAGTCTCACAGGCATCCCCAGGAACGTGGATaGAGGAGTTGGCAGAGGAATAAATGGAGATCCTACCAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: SPSSVQSHRHPQERG*RSWQRNKWRSYQAL
Trigger: CAAGGCCTGGTAGGATCTCCATTTATTCCTCTGCCAACTCCTGCATCCACGTTCCTGGGGATGCCTGTGAGACTGCACACTGCTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462078.1
CDS GCA 90 bp ATGGTCAGACCCACGCTGAGGCTGCTCACTTTCCTCCACATCACCTaGTCCCCAGGGTTACTGATCTGTGTCACTTGCAGCCCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: MVRPTLRLLTFLHIT*SPGLLICVTCSPFR
Trigger: TCTGAAGGGGCTGCAAGTGACACAGATCAGTAACCCTGGGGAGCAGGTGATGTGGAGGAAAGTGAGCAGCCTCAGCGTGGGTCTGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS CCA 90 bp GGCCCAGCAGGCACGAGATCTGCATCGTGTTCACAGTTGAACCTTTaGCTCCCGACTGCACCATCATCTGCAGGCTGTTCTCTGGGAACT +
Preference number: 5 (lower is better)
Translates to: GPAGTRSASCSQLNL*LPTAPSSAGCSLGT
Trigger: AGTTCCCAGAGAACAGCCTGCAGATGATGGTGCAGTCGGGAGCCAAAGGTTCAACTGTGAACACGATGCAGATCTCGTGCCTGCTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CCA 90 bp GGAGGAGAGGGGTGGCCAAGTGAGGGCGCCTTTGTAGGAGGAGCCTaGTTACTTCCCAGCTCCTTCCCGAGAGGACACAGAAAAGAATTT +
Preference number: 5 (lower is better)
Translates to: GGEGWPSEGAFVGGA*LLPSSFPRGHRKEF
Trigger: AAATTCTTTTCTGTGTCCTCTCGGGAAGGAGCTGGGAAGTAACCAGGCTCCTCCTACAAAGGCGCCCTCACTTGGCCACCCCTCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683266.1
CDS-3UTR CAA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGGCAATGAGCTTGCTCTaGCTCTCACACACGTTCTTT +
Preference number: 5 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQAMSLL*LSHTFF
Trigger: AAAGAACGTGTGTGAGAGCAAGAGCAAGCTCATTGC...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTTGGCAACTTCTGTTCTaGGGCCATCAATGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGWQLLF*GHQCQK
Trigger: CTTCTGGCATTGATGGCCCAAGAACAGAAGTTGCCA...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp ACGGCCAAGAACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCTGGTGGAGAGCTTTTTaGGGATCTGCTCTGGATAAA +
Preference number: 5 (lower is better)
Translates to: TAKNRAAQSSGLEACVPSWWRAF*GSALDK
Trigger: TTTATCCAGAGCAGATCCCAAAAAAGCTCTCCACCA...GGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTTCTTGGCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCTCAATGCCATACGTGTaGGCTATGGCGTGGATGTCG +
Preference number: 5 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSSMPYV*AMAWMS
Trigger: CGACATCCACGCCATAGCCAACACGTATGGCATTGA...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGTAGCGGGGAAGAGTTaGACCGGATCCCAAAGCGAT +
Preference number: 5 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRVAGKS*TGSQSD
Trigger: ATCGCTTTGGGATCCGGTCAAACTCTTCCCCGCTAC...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTTGACAAAGCCTCCCTaGATCCCCAACCCTACCCCT +
Preference number: 5 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRLTKPP*IPNPTP
Trigger: AGGGGTAGGGTTGGGGATCAAGGGAGGCTTTGTCAA...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp AGGAATCTTGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTGACAAATGGCCTCGCTaGCTGTGCTGGGCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: RNLVCCPWPLTAKEPRFPDKWPR*LCWAGR
Trigger: TCTGCCAGCCCAGCACAGCAAGCGAGGCCATTTGTC...AGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGAAACCTCCCAGGCCATaGAGTCCAACTTGCGCGAAG +
Preference number: 5 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGKPPRP*SPTCAK
Trigger: CTTCGCGCAAGTTGGACTCAATGGCCTGGGAGGTTT...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTGTGGTGTCTGAAACTTaGTCACATGGGAGGCTACAG +
Preference number: 5 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGVVSET*SHGRLQ
Trigger: CTGTAGCCTCCCATGTGACAAAGTTTCAGACACCAC...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS TCA 90 bp TGTAGGGCCCCGACTTCCAGAACCCTCAGCTGGCAGAGTAAGAGGTaGATCACGGCCCGGGGACAAGTCAGCATGTGGCAGTTTAAACAA +
Preference number: 5 (lower is better)
Translates to: CRAPTSRTLSWQSKR*ITARGQVSMWQFKQ
Trigger: TTGTTTAAACTGCCACATGCTGACTTGTCCCCGGGCCGTGATTCACCTCTTACTCTGCCAGCTGAGGGTTCTGGAAGTCGGGGCCCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000683470.1
ENST00000684026.1
ENST00000684177.1
ENST00000684556.1
CDS GCA 90 bp AACTGCACCACACTGCCGTCACTGTCACGGACCGTGAGATCATACTaGACGACCAGCCCCTCTAGGTGCTTGATGATGCACCTTTGGAGA +
Preference number: 5 (lower is better)
Translates to: NCTTLPSLSRTVRSY*TTSPSRCLMMHLWR
Trigger: TCTCCAAAGGTGCATCATCAAGCACCTAGAGGGGCTGGTCGTGCAGTATGATCTCACGGTCCGTGACAGTGACGGCAGTGTGGTGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS GCA 90 bp ATTCTTAATTCAACCTCAAGCCCGGAGTCACCACGCGATTCAACGTaGGCTTGCGCGCGGAAGCGGTCGCAGGAACGACATTTACGTGGA +
Preference number: 5 (lower is better)
Translates to: ILNSTSSPESPRDST*ACARKRSQERHLRG
Trigger: TCCACGTAAATGTCGTTCCTGCGACCGCTTCCGCGCGCAAGCGCACGTTGAATCGCGTGGTGACTCCGGGCTTGAGGTTGAATTAAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409681.1
CDS GCA 90 bp TTCCTCCACATCACCTGCTCCCCAGGGTTACTGATCTGTGTCACTTaGAGCCCCTTCAGAGAGCAGAGACCACATGGTCTGGTCTGTGTC +
Preference number: 5 (lower is better)
Translates to: FLHITCSPGLLICVT*SPFREQRPHGLVCV
Trigger: GACACAGACCAGACCATGTGGTCTCTGCTCTCTGAAGGGGCTGCAAGTGACACAGATCAGTAACCCTGGGGAGCAGGTGATGTGGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS CCA 90 bp TTCATGACAGCCTGCAAGTTCACCGTCTGGCCATTAGTAAACATCTaGTCTCCTAGGCGACTGACTGGGCGATACCTTGAGGGCGGCACC +
Preference number: 5 (lower is better)
Translates to: FMTACKFTVWPLVNI*SPRRLTGRYLEGGT
Trigger: GGTGCCGCCCTCAAGGTATCGCCCAGTCAGTCGCCTAGGAGACCAGATGTTTACTAATGGCCAGACGGTGAACTTGCAGGCTGTCATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000684177.1
ENST00000684556.1
CDS CCA 90 bp CTGACACTGATGCAAAGTAGATGTCAGGACGCCAGACAGACAGACTaGGGTCAGGACAAGCGGCCGCCTTCTTCTGGTATTTCCTTCGGC +
Preference number: 5 (lower is better)
Translates to: LTLMQSRCQDARQTD*GQDKRPPSSGISFG
Trigger: GCCGAAGGAAATACCAGAAGAAGGCGGCCGCTTGTCCTGACCCCAGTCTGTCTGTCTGGCGTCCTGACATCTACTTTGCATCAGTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGGGACCCCAGGAGGTaGTTCTGCACAATTTCAGTT +
Preference number: 5 (lower is better)
Translates to: LSLATHSKRTPLPYSGGAWDPRR*FCTISV
Trigger: AACTGAAATTGTGCAGAACAACCTCCTGGGGTCCCA...GGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGCCAATTTCGTTGGTGTaGATGTACATGTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLPISLV*MYMSGQ
Trigger: CTGCCCAGACATGTACATCAACACCAACGAAATTGG...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CTGCTTTCAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCAGCCCCTCTAGGTGCTaGATGATGCACCTTTGGAGA +
Preference number: 5 (lower is better)
Translates to: LLSGPRSLLCSVLSLGTASPSRC*MMHLWR
Trigger: TCTCCAAAGGTGCATCATCAAGCACCTAGAGGGGCT...GGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AGGAATCTTGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTCTCTTCAGGGCTTTCTaGGTGTTGAGCACGGGCACG +
Preference number: 5 (lower is better)
Translates to: RNLVCCPWPLTAKEPRFPLFRAF*VLSTGT
Trigger: CGTGCCCGTGCTCAACACCAAGAAAGCCCTGAAGAG...AGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTGCACACCCTGGTGAGTaGCTTCTTCAGGCTTTTCAC +
Preference number: 5 (lower is better)
Translates to: QAQGRCCALYCHLELPWIAHPGE*LLQAFH
Trigger: GTGAAAAGCCTGAAGAAGCAACTCACCAGGGTGTGC...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CTGCTTTCAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCGCACACCCTGGTGAGTaGCTTCTTCAGGCTTTTCAC +
Preference number: 5 (lower is better)
Translates to: LLSGPRSLLCSVLSLGTAAHPGE*LLQAFH
Trigger: GTGAAAAGCCTGAAGAAGCAACTCACCAGGGTGTGC...GGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AGGAATCTTGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTTGCTTCTCCTTGCGTTaGGCATCAGAGGCATCGGCG +
Preference number: 5 (lower is better)
Translates to: RNLVCCPWPLTAKEPRFPCFSLR*ASEASA
Trigger: CGCCGATGCCTCTGATGCCAAACGCAAGGAGAAGCA...AGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AGAGAAAAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGCTTCTCCTTGCGTTaGGCATCAGAGGCATCGGCG +
Preference number: 5 (lower is better)
Translates to: REKPGNLFNRPSSDLGSMCFSLR*ASEASA
Trigger: CGCCGATGCCTCTGATGCCAAACGCAAGGAGAAGCA...CATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTTTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCTGCAGCACAGGTGAGGCTCTTCATCTTGCTCTaGGGTCTTTCGAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: QDFSLGVMPQRPPAAQVRLFILL*GLSSTF
Trigger: GAAGGTGCTCGAAAGACCCAAGAGCAAGATGAAGAG...CCTCACCTGTGCTGCAGGAGGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GGAGGGGCAAGGATGAGCAACTCTGTCACTTTCCAGGTGAAGCTGGCCCAGCTCACGGCAAACACATCCTaGATCTCCTTCTCGATCACC +
Preference number: 5 (lower is better)
Translates to: GGARMSNSVTFQVKLAQLTANTS*ISFSIT
Trigger: GGTGATCGAGAAGGAGATCAAGGATGTGTTTGCCGT...GAGCTGGGCCAGCTTCACCTGGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGGTGGAGAAATTGAAATaGTTGTACACCGTTGGTGGG +
Preference number: 5 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQVEKLK*LYTVGG
Trigger: CCCACCAACGGTGTACAACAATTTCAATTTCTCCAC...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCACGGGGTCTCACTGGGTaGCCCAGGCTAGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: EDGELACLGQKTTSSVRARGLTG*PRLVSN
Trigger: GTTTGAGACTAGCCTGGGCAACCCAGTGAGACCCCG...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGAGGGCCAGTGACTCCTaGAGATGTCATCGTACCGAT +
Preference number: 5 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGRASDS*RCHRTD
Trigger: ATCGGTACGATGACATCTCAAGGAGTCACTGGCCCT...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGGTTAAACCCTGCTCCTaGATGACCACTCGTGGTAGG +
Preference number: 5 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGVKPCS*MTTRGR
Trigger: CCTACCACGAGTGGTCATCAAGGAGCAGGGTTTAAC...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCGGTGAACTGGCTTGTTaGGGGCAGAAGACTACAAGT +
Preference number: 5 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSGELAC*GQKTTS
Trigger: ACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACC...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp AGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTGAAACTTTGTCAGCTGCGGTGGGAGGGTaGCTTGGTCCTGGGACTTCG +
Preference number: 5 (lower is better)
Translates to: RQVFTVVQLRTVVSETLSAAVGG*LGPGTS
Trigger: CGAAGTCCCAGGACCAAGCAACCCTCCCACCGCAGC...TGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS GCA 90 bp GCGCAGGATGTCCTCGGGTCTCAGGCACTTCTCCTGCTGGTAATATaGATGTGGCAGGAACTGAAACCGCAGCTGGTACACCTGGAATTT +
Preference number: 5 (lower is better)
Translates to: AQDVLGSQALLLLVI*MWQELKPQLVHLEF
Trigger: AAATTCCAGGTGTACCAGCTGCGGTTTCAGTTCCTGCCACATGCATATTACCAGCAGGAGAAGTGCCTGAGACCCGAGGACATCCTGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000492034.1
CDS GCA 90 bp CAGAAATTGAGCTCTTCAGCCGAATACATCCCGAAGGAAATGCCCTaGAGCCGCCGCCAGGGCATGTTCTTGGAGATCAACATCCTCCAG +
Preference number: 5 (lower is better)
Translates to: QKLSSSAEYIPKEMP*SRRQGMFLEINILQ
Trigger: CTGGAGGATGTTGATCTCCAAGAACATGCCCTGGCGGCGGCTGCAGGGCATTTCCTTCGGGATGTATTCGGCTGAAGAGCTCAATTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS CCA 90 bp TTATCGAAGAGGAGAGGGTTATACACTGTGAGTGGGAGCTCAATGTaGCCCAGGTGCCCAGAACAGTTGCTGAAGTCCTGCACGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LSKRRGLYTVSGSSM*PRCPEQLLKSCTQV
Trigger: CACCTGCGTGCAGGACTTCAGCAACTGTTCTGGGCACCTGGGCCACATTGAGCTCCCACTCACAGTGTATAACCCTCTCCTCTTCGATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000683470.1
ENST00000684026.1
ENST00000684177.1
ENST00000684556.1
CDS CCA 90 bp CCCACCTCTTCATCTTGCTCTTGGGTCTTTCGAGCACCTTCCCTGTaGGGATTTCGTTCCTCCTGCATGTCTTCATCGTCGTTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: PTSSSCSWVFRAPSL*GFRSSCMSSSSFSS
Trigger: CGAGGAGAACGACGATGAAGACATGCAGGAGGAACGAAATCCCCACAGGGAAGGTGCTCGAAAGACCCAAGAGCAAGATGAAGAGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263857.11
ENST00000492034.1
ENST00000496892.5
CDS CCA 90 bp AGTGTGCAGTCTCACAGGCATCCCCAGGAACGTGGATGCAGGAGTTaGCAGAGGAATAAATGGAGATCCTACCAGGCCTTGGAATGCCCA +
Preference number: 5 (lower is better)
Translates to: SVQSHRHPQERGCRS*QRNKWRSYQALECP
Trigger: TGGGCATTCCAAGGCCTGGTAGGATCTCCATTTATTCCTCTGCCAACTCCTGCATCCACGTTCCTGGGGATGCCTGTGAGACTGCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462078.1
CDS-3UTR CAA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTAAGAGAGCAATGAGCTaGCTCTTGCTCTCACACACG +
Preference number: 5 (lower is better)
Translates to: QAQGRCCALYCHLELPWIKRAMS*LLLSHT
Trigger: CGTGTGTGAGAGCAAGAGCAAGCTCATTGCTCTCTT...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AGGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGTGGCAACTTCTGTTCTaGGGCCATCAATGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: RQRGWVGGGLCYAVLDSGWQLLF*GHQCQK
Trigger: CTTCTGGCATTGATGGCCCAAGAACAGAAGTTGCCA...CCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAGTGGGTAGGTCAGTTTaGTGGCAAACACCATGGGAA +
Preference number: 5 (lower is better)
Translates to: GREVGWVEDYATLYLTQGVGRSV*WQTPWE
Trigger: TTCCCATGGTGTTTGCCACAAAACTGACCTACCCAC...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGGTGGGTAGGTCAGTTTaGTGGCAAACACCATGGGAA +
Preference number: 5 (lower is better)
Translates to: PVGCMGQNIGLHTKLTAEVGRSV*WQTPWE
Trigger: TTCCCATGGTGTTTGCCACAAAACTGACCTACCCAC...CTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTTCACGCGCCCCACTTaGTCCGTGAGTCCTCGGTAC +
Preference number: 5 (lower is better)
Translates to: FSVNRESGLLLRGYATEAFTRPT*SVSPRY
Trigger: GTACCGAGGACTCACGGACAAAGTGGGGCGCGTGAA...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGTTCTTCAATGATACGTaGCCTCTTGACATCTGCCTT +
Preference number: 5 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQFFNDT*PLDICL
Trigger: AAGGCAGATGTCAAGAGGCAACGTATCATTGAAGAA...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGATAACTCTTCTCTGTTaGAGCTGCCCACTCTTGACT +
Preference number: 5 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLITLLC*SCPLLT
Trigger: AGTCAAGAGTGGGCAGCTCAAACAGAGAAGAGTTAT...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCGAGCTCATGTCAAAGTaGATCTTCATCAGAGGGAGC +
Preference number: 5 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSELMSK*IFIRGS
Trigger: GCTCCCTCTGATGAAGATCAACTTTGACATGAGCTC...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAAGGACCTCTGCATACTaGAATAGCTCTGGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRRTSAY*NSSGRL
Trigger: CAACCTCCCAGAGCTATTCAAGTATGCAGAGGTCCT...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTACGGCAAACACATCCTaGATCTCCTTCTCGATCACC +
Preference number: 5 (lower is better)
Translates to: QAQGRCCALYCHLELPWITANTS*ISFSIT
Trigger: GGTGATCGAGAAGGAGATCAAGGATGTGTTTGCCGT...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAAAGCATGGCTTCCCCTaGGTCTTCTCAGTGAATCGT +
Preference number: 5 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRKHGFP*VFSVNR
Trigger: ACGATTCACTGAGAAGACCAAGGGGAAGCCATGCTT...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCACAGGAATCTTGTCTGTaGTCCCTGGCCACTCACAGC +
Preference number: 5 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQAQESCL*SLATHS
Trigger: GCTGTGAGTGGCCAGGGACAACAGACAAGATTCCTG...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTGAAACTTTGTCAGCCAATATGCAGGGCTaGCTCCTTCGCCTCTGCGCC +
Preference number: 5 (lower is better)
Translates to: RQVFTVVQLRTVVSETLSANMQG*LLRLCA
Trigger: GGCGCAGAGGCGAAGGAGCAAGCCCTGCATATTGGC...TGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp AGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTGAAACTTTGTCAACACCACCCAGCACTTaGGGAGGCCACAGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: RQVFTVVQLRTVVSETLSTPPST*GGHSGR
Trigger: CCTCCCACTGTGGCCTCCCAAAGTGCTGGGTGGTGT...TGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp CTGCTTTCAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCCCACTGTAAAGTCCTaGCAGACATCTGTCATGGCA +
Preference number: 5 (lower is better)
Translates to: LLSGPRSLLCSVLSLGTAPTVKS*QTSVMA
Trigger: TGCCATGACAGATGTCTGCAAGGACTTTACAGTGGG...GGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCACAGTGGAGATCAAGGTaGGATGGATGCAGCATGGGG +
Preference number: 5 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQAQWRSR*DGCSMG
Trigger: CCCCATGCTGCATCCATCCAACCTTGATCTCCACTG...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCACAGGGCCCACATAGCTaGTGCATCTTAGGGTGCCTG +
Preference number: 5 (lower is better)
Translates to: EDGELACLGQKTTSSVRAQGPHS*CILGCL
Trigger: CAGGCACCCTAAGATGCACAAGCTATGTGGGCCCTG...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp AGGAATCTTGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTTGTGAGCTCAGGAGTTaGAGCCTGGGCAACATGGTG +
Preference number: 5 (lower is better)
Translates to: RNLVCCPWPLTAKEPRFPCELRS*SLGNMV
Trigger: CACCATGTTGCCCAGGCTCAAACTCCTGAGCTCACA...AGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS TCA 90 bp CCGCCAGGGCATGTTCTTGGAGATCAACATCCTCCAGGTCCGTTTTaGATTCCGACACCCCAAGAGACGTTCCACTCACCACCTGACTAT +
Preference number: 5 (lower is better)
Translates to: PPGHVLGDQHPPGPF*IPTPQETFHSPPDY
Trigger: ATAGTCAGGTGGTGAGTGGAACGTCTCTTGGGGTGTCGGAATTCAAAACGGACCTGGAGGATGTTGATCTCCAAGAACATGCCCTGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000263857.11
ENST00000409024.3
ENST00000409681.1
ENST00000424089.5
ENST00000486964.5
ENST00000683266.1
ENST00000684026.1
ENST00000684177.1
CDS TCA 90 bp AAAGAAACAGAATGGAAATGGGCACGAGGGTGCCATTCTGCACTGTaGACGGGAATAAGCACTGGCTGTGGAGGAGAGGGGTGGCCAAGT +
Preference number: 5 (lower is better)
Translates to: KETEWKWARGCHSAL*TGISTGCGGEGWPS
Trigger: ACTTGGCCACCCCTCTCCTCCACAGCCAGTGCTTATTCCCGTTCACAGTGCAGAATGGCACCCTCGTGCCCATTTCCATTCTGTTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683266.1
CDS GCA 90 bp AATTTCTTGAGCTCTTCAGCCGAATACATCCCGAAGGAAATGCCCTaGAGCCGCCGCCAGGGCATGTTCTTGGAGATCAACATCCTCCAG +
Preference number: 5 (lower is better)
Translates to: NFLSSSAEYIPKEMP*SRRQGMFLEINILQ
Trigger: CTGGAGGATGTTGATCTCCAAGAACATGCCCTGGCGGCGGCTGCAGGGCATTTCCTTCGGGATGTATTCGGCTGAAGAGCTCAAGAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000684026.1
ENST00000684177.1
CDS GCA 90 bp CACGAGATCTGCATCGTGTTCACAGTTGAACCTTTGGCTCCCGACTaGACCATCATCTGCAGGCTGTTCTCTGGGAACTGTCTGTGTAGG +
Preference number: 5 (lower is better)
Translates to: HEICIVFTVEPLAPD*TIICRLFSGNCLCR
Trigger: CCTACACAGACAGTTCCCAGAGAACAGCCTGCAGATGATGGTGCAGTCGGGAGCCAAAGGTTCAACTGTGAACACGATGCAGATCTCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CCA 90 bp GTCACCTCTTCATCTTGCTCTTGGGTCTTTCGAGCACCTTCCCTGTaGGGATTTCGTTCCTCCTGCATGTCTTCATCGTCGTTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: VTSSSCSWVFRAPSL*GFRSSCMSSSSFSS
Trigger: CGAGGAGAACGACGATGAAGACATGCAGGAGGAACGAAATCCCCACAGGGAAGGTGCTCGAAAGACCCAAGAGCAAGATGAAGAGGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409681.1
CDS CCA 90 bp TCTGTGTCACTTGCAGCCCCTTCAGAGAGCAGAGACCACATGGTCTaGTCTGTGTCCTGGCATTGTGCTCATCACAAACATGGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: SVSLAAPSESRDHMV*SVSWHCAHHKHGPW
Trigger: CCAAGGACCATGTTTGTGATGAGCACAATGCCAGGACACAGACCAGACCATGTGGTCTCTGCTCTCTGAAGGGGCTGCAAGTGACACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS-3UTR CAA 90 bp AGTCAACTTGCTGTTGTGTTCCTTTCGGACAACGGATCGCCCGGTCATGTGCGCTGGGACCCCAGGAGGTaGTTCTGCACAATTTCAGTT +
Preference number: 5 (lower is better)
Translates to: SQLAVVFLSDNGSPGHVRWDPRR*FCTISV
Trigger: AACTGAAATTGTGCAGAACAACCTCCTGGGGTCCCA...GCGCACATGACCGGGCGATCCGTTGTCCGAAAGGAACACAACAGCAAGTTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424089.5
CDS-3UTR CAA 90 bp CTGCTTTCAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCGCAATGAGCTTGCTCTaGCTCTCACACACGTTCTTT +
Preference number: 5 (lower is better)
Translates to: LLSGPRSLLCSVLSLGTAAMSLL*LSHTFF
Trigger: AAAGAACGTGTGTGAGAGCAAGAGCAAGCTCATTGC...GGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TTGTGTTCCTTTCGGACAACGGATCGCCCGGTCTTGCAGTGGGGACAGCGCTTAGCAATGAGCTTGCTCTaGCTCTCACACACGTTCTTT +
Preference number: 5 (lower is better)
Translates to: LCSFRTTDRPVLQWGQRLAMSLL*LSHTFF
Trigger: AAAGAACGTGTGTGAGAGCAAGAGCAAGCTCATTGC...TAAGCGCTGTCCCCACTGCAAGACCGGGCGATCCGTTGTCCGAAAGGAACACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409024.3
CDS-3UTR CAA 90 bp GGAGGGGCAAGGATGAGCAACTCTGTCACTTTCCAGGTGAAGCTGGCCCAGCTCAACGTGATAGTCAACTaGCTGTTGTGTTCCTTTCGG +
Preference number: 5 (lower is better)
Translates to: GGARMSNSVTFQVKLAQLNVIVN*LLCSFR
Trigger: CCGAAAGGAACACAACAGCAAGTTGACTATCACGTT...GAGCTGGGCCAGCTTCACCTGGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AACAGGGCGGCACAGTCCTCTGGGCTGGAGGCCTGTGTTCCTTCCCATAAGCAGAAGAACACACTGGGATaGAATCTGGATTCCATACCA +
Preference number: 5 (lower is better)
Translates to: NRAAQSSGLEACVPSHKQKNTLG*NLDSIP
Trigger: TGGTATGGAATCCAGATTCAATCCCAGTGTGTTCTT...CTGCTTATGGGAAGGAACACAGGCCTCCAGCCCAGAGGACTGTGCCGCCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGCCAATTTCGTTGGTGTaGATGTACATGTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRPISLV*MYMSGQ
Trigger: CTGCCCAGACATGTACATCAACACCAACGAAATTGG...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTATGATACGTTGCCTCTaGACATCTGCCTTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: QAQGRCCALYCHLELPWIMIRCL*TSAFGF
Trigger: GAAGCCAAAGGCAGATGTCAAGAGGCAACGTATCAT...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTTGGTTCACTTCCTCCTaGAACTTCAGATCAATCATG +
Preference number: 5 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGWFTSS*NFRSIM
Trigger: CATGATTGATCTGAAGTTCAAGGAGGAAGTGAACCA...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp ATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCAGGCAAAGAACTCAGGAGGTTaGATGCCGGTGAGGAACCTG +
Preference number: 5 (lower is better)
Translates to: MGQNIGLHTKLTAEKSQAKNSGG*MPVRNL
Trigger: CAGGTTCCTCACCGGCATCAAACCTCCTGAGTTCTT...TGCCTGGCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTGCAGGAACTGTGTCTaGGGGATGTCCAGGCCATCC +
Preference number: 5 (lower is better)
Translates to: FSVNRESGLLLRGYATEACRNCV*GMSRPS
Trigger: GGATGGCCTGGACATCCCCAAGACACAGTTCCTGCA...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGATTGAGCTGCCCACTCTaGACTGTAGTCATCAACCTT +
Preference number: 5 (lower is better)
Translates to: GREVGWVEDYATLYLTQGLSCPL*TVVINL
Trigger: AAGGTTGATGACTACAGTCAAGAGTGGGCAGCTCAA...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCTCCTGCAGCACAGGTGAGGATAACTCTTCTCTGTTaGAGCTGCCCACTCTTGACT +
Preference number: 5 (lower is better)
Translates to: QDFSLGVMPQRPPAAQVRITLLC*SCPLLT
Trigger: AGTCAAGAGTGGGCAGCTCAAACAGAGAAGAGTTAT...CCTCACCTGTGCTGCAGGAGGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CTTACAGTCCTAAGAAGACTCCAAAGCCTCTGCCATCTTAAGCTGCCAAGGCCACTCTTCAGGGCTTTCTaGGTGTTGAGCACGGGCACG +
Preference number: 5 (lower is better)
Translates to: LTVLRRLQSLCHLKLPRPLFRAF*VLSTGT
Trigger: CGTGCCCGTGCTCAACACCAAGAAAGCCCTGAAGAG...TGGCCTTGGCAGCTTAAGATGGCAGAGGCTTTGGAGTCTTCTTAGGACTGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp GGAGGGGCAAGGATGAGCAACTCTGTCACTTTCCAGGTGAAGCTGGCCCAGCTCCGTTCTTATTGTTGGTaGTTTCATTCAGGAGGCACC +
Preference number: 5 (lower is better)
Translates to: GGARMSNSVTFQVKLAQLRSYCW*FHSGGT
Trigger: GGTGCCTCCTGAATGAAACAACCAACAATAAGAACG...GAGCTGGGCCAGCTTCACCTGGAAAGTGACAGAGTTGCTCATCCTTGCCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGAAGAGGACCTCTGCATACTaGAATAGCTCTGGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: QRGWVGGGLCYAVLDSGKRTSAY*NSSGRL
Trigger: CAACCTCCCAGAGCTATTCAAGTATGCAGAGGTCCT...CTTCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGTCCATCAGATTTGACTaGGGCCTACTTTCCAAAACT +
Preference number: 5 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLSIRFD*GLLSKT
Trigger: AGTTTTGGAAAGTAGGCCCAAGTCAAATCTGATGGA...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTCCTCCCTTCTGGCTGTaGAACACCCAAGTACCTCCC +
Preference number: 5 (lower is better)
Translates to: AQCLAQNAASLLNHILEVPPFWL*NTQVPP
Trigger: GGGAGGTACTTGGGTGTTCAACAGCCAGAAGGGAGG...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTAGCAAGAATCATGGGTaGGGGAAGGCAAGTGTTTAC +
Preference number: 5 (lower is better)
Translates to: QAQGRCCALYCHLELPWISKNHG*GKASVY
Trigger: GTAAACACTTGCCTTCCCCAACCCATGATTCTTGCT...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGCGGTGGGAGGGTTGCTaGGTCCTGGGACTTCGAGGC +
Preference number: 5 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGRWEGC*VLGLRG
Trigger: GCCTCGAAGTCCCAGGACCAAGCAACCCTCCCACCG...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS TCA 90 bp AGCCAGGAACGGATCGAGGAGTTTCCTTCACCCAGGCTTTCCCAGTaGTTTTCGCCTTTCCAGATAAGTTCAGTGGGATGTGGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: SQERIEEFPSPRLSQ*FSPFQISSVGCGPL
Trigger: CAGAGGACCACATCCCACTGAACTTATCTGGAAAGGCGAAAATCACTGGGAAAGCCTGGGTGAAGGAAACTCCTCGATCCGTTCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000483538.1
ENST00000683266.1
CDS GCA 90 bp ATCGTGTTCACAGTTGAACCTTTGGCTCCCGACTGCACCATCATCTaGAGGCTGTTCTCTGGGAACTGTCTGTGTAGGCCAAAAGGCATG +
Preference number: 5 (lower is better)
Translates to: IVFTVEPLAPDCTII*RLFSGNCLCRPKGM
Trigger: CATGCCTTTTGGCCTACACAGACAGTTCCCAGAGAACAGCCTGCAGATGATGGTGCAGTCGGGAGCCAAAGGTTCAACTGTGAACACGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS GCA 90 bp TTGTGGGTTACATCCAAGTCGAATCCATTTCCCTCCAACAACTGCTaGCACTGTTGCCTAGTTAGGGGTCATCTGCTACTCCCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: LWVTSKSNPFPSNNC*HCCLVRGHLLLPSQ
Trigger: CTGGGAGGGGAGTAGCAGATGACCCCTAACTAGGCAACAGTGGCAGCAGTTGTTGGAGGGAAATGGATTCGACTTGGATGTAACCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684556.1
CDS GCA 90 bp CACTTGTGGGTTACATCCAAGTCGAATCCATTTCCCTCCAACAACTaGTGCCACTGTTGCCTAGTTAGGGGTCATCTGCTACTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: HLWVTSKSNPFPSNN*CHCCLVRGHLLLPS
Trigger: GGAGGGGAGTAGCAGATGACCCCTAACTAGGCAACAGTGGCAGCAGTTGTTGGAGGGAAATGGATTCGACTTGGATGTAACCCACAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684556.1
CDS CCA 90 bp CATCGTGGGATCCCAGCATGGTGGCTTGCTTCAGAAACTGGAAGCTaGTTTCAAATGTCATCTGCTGTAGCGGGGAAGAGTTTGACCGGA +
Preference number: 5 (lower is better)
Translates to: HRGIPAWWLASETGS*FQMSSAVAGKSLTG
Trigger: TCCGGTCAAACTCTTCCCCGCTACAGCAGATGACATTTGAAACCAGCTTCCAGTTTCTGAAGCAAGCCACCATGCTGGGATCCCACGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TGTGCGCCCTGGGACCCCAGGAGGTTGTTCTGCACAATTTCAGTTGTGTATTGTTCCTCCAGGTCCGTTTaGAATTCCGACACCCCAAGA +
Preference number: 5 (lower is better)
Translates to: CAPWDPRRLFCTISVVYCSSRSV*NSDTPR
Trigger: TCTTGGGGTGTCGGAATTCAAAACGGACCTGGAGGA...ACAATACACAACTGAAATTGTGCAGAACAACCTCCTGGGGTCCCAGGGCGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR CAA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCGTGGAGCACACCTCTTaGGAATCTGCAGGGCCCAAA +
Preference number: 5 (lower is better)
Translates to: FSVNRESGLLLRGYATEAVEHTS*ESAGPK
Trigger: TTTGGGCCCTGCAGATTCCAAAGAGGTGTGCTCCAC...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GCAATGAGCTTGCTCTTGCTCTCACACACGTTCTTTACATGTGCGCCCTGGGACAAGAGAGCAATGAGCTaGCTCTTGCTCTCACACACG +
Preference number: 5 (lower is better)
Translates to: AMSLLLLSHTFFTCAPWDKRAMS*LLLSHT
Trigger: CGTGTGTGAGAGCAAGAGCAAGCTCATTGCTCTCTT...GTCCCAGGGCGCACATGTAAAGAACGTGTGTGAGAGCAAGAGCAAGCTCATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409024.3
CDS-3UTR CAA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTATAGTCAACTTGCTGTaGTGTTCCTTTCGGACAACG +
Preference number: 5 (lower is better)
Translates to: QAQGRCCALYCHLELPWIIVNLL*CSFRTT
Trigger: CGTTGTCCGAAAGGAACACAACAGCAAGTTGACTAT...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CCGGTCATGTGCGCCCTGGGACCCCAGGAGGTTGTTCTGCACAATTTCAGTTGTATAGTCAACTTGCTGTaGTGTTCCTTTCGGACAACG +
Preference number: 5 (lower is better)
Translates to: PVMCALGPQEVVLHNFSCIVNLL*CSFRTT
Trigger: CGTTGTCCGAAAGGAACACAACAGCAAGTTGACTAT...ACAACTGAAATTGTGCAGAACAACCTCCTGGGGTCCCAGGGCGCACATGACCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424089.5
CDS-3UTR CAA 90 bp GGCAGAGAGGTTGGGTGGGTGGAGGACTATGCTACGCTGTACTTGACTCAGGGACTAATGCCTGGGTACTaGTCCATCATTAGTTTGTCC +
Preference number: 5 (lower is better)
Translates to: GREVGWVEDYATLYLTQGLMPGY*SIISLS
Trigger: GGACAAACTAATGATGGACAAGTACCCAGGCATTAG...TCCCTGAGTCAAGTACAGCGTAGCATAGTCCTCCACCCACCCAACCTCTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CTGCTTTCAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCTGGTGGAGAGCTTTTTaGGGATCTGCTCTGGATAAA +
Preference number: 5 (lower is better)
Translates to: LLSGPRSLLCSVLSLGTAWWRAF*GSALDK
Trigger: TTTATCCAGAGCAGATCCCAAAAAAGCTCTCCACCA...GGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCATGGGTGTCTTGATGTaGGCGCTGGCCACCATGAGA +
Preference number: 5 (lower is better)
Translates to: FSVNRESGLLLRGYATEAMGVLM*ALATMR
Trigger: TCTCATGGTGGCCAGCGCCAACATCAAGACACCCAT...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CTGGGTTCTATGTGTGGGAGTGAACTGCTGCGGCCCTGGAGCGACTGCTCCCAGTGGTACACCTGGAATTaGTTCTGTTTTTCTTCCATA +
Preference number: 5 (lower is better)
Translates to: LGSMCGSELLRPWSDCSQWYTWN*FCFSSI
Trigger: TATGGAAGAAAAACAGAACAAATTCCAGGTGTACCA...CTGGGAGCAGTCGCTCCAGGGCCGCAGCAGTTCACTCCCACACATAGAACCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCCTCTTCATCTTGCTCTaGGGTCTTTCGAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSLFILL*GLSSTF
Trigger: GAAGGTGCTCGAAAGACCCAAGAGCAAGATGAAGAG...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CTTACAGTCCTAAGAAGACTCCAAAGCCTCTGCCATCTTAAGCTGCCAAGGCCAGCCCACCTCTTCATCTaGCTCTTGGGTCTTTCGAGC +
Preference number: 5 (lower is better)
Translates to: LTVLRRLQSLCHLKLPRPAHLFI*LLGLSS
Trigger: GCTCGAAAGACCCAAGAGCAAGATGAAGAGGTGGGC...TGGCCTTGGCAGCTTAAGATGGCAGAGGCTTTGGAGTCTTCTTAGGACTGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp CCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGCGTTCTTATTGTTGGTaGTTTCATTCAGGAGGCACC +
Preference number: 5 (lower is better)
Translates to: PVGCMGQNIGLHTKLTAERSYCW*FHSGGT
Trigger: GGTGCCTCCTGAATGAAACAACCAACAATAAGAACG...CTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CTTTTCTGTCCATGCCAGGGAAATGTATTGCTGGTGCTAGAGGGAGAGGAAACGTATCTCAGAGGCTGCTaGAGCTCGAACAGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: LFCPCQGNVLLVLEGEETYLRGC*SSNRPV
Trigger: GACAGGCCTGTTCGAGCTCAAGCAGCCTCTGAGATA...CGTTTCCTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCATGGACAGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCCAGGAATCTTGTCTGTaGTCCCTGGCCACTCACAGC +
Preference number: 5 (lower is better)
Translates to: FSVNRESGLLLRGYATEAQESCL*SLATHS
Trigger: GCTGTGAGTGGCCAGGGACAACAGACAAGATTCCTG...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS GCA 90 bp TCAATCATGTTAAAATCCCTCTGGTCCTTGCCCAGATGGGCATCCTaGCATTTTCCTCGGACCTCATCATATGATGCGGCTTCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: SIMLKSLWSLPRWAS*HFPRTSSYDAASGR
Trigger: CCTGCCAGAAGCCGCATCATATGATGAGGTCCGAGGAAAATGGCAGGATGCCCATCTGGGCAAGGACCAGAGGGATTTTAACATGATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CCA 90 bp CGAATCAGAACTACATCCTTCATGACAGCCTGCAAGTTCACCGTCTaGCCATTAGTAAACATCTGGTCTCCTAGGCGACTGACTGGGCGA +
Preference number: 5 (lower is better)
Translates to: RIRTTSFMTACKFTV*PLVNIWSPRRLTGR
Trigger: TCGCCCAGTCAGTCGCCTAGGAGACCAGATGTTTACTAATGGCCAGACGGTGAACTTGCAGGCTGTCATGAAGGATGTAGTTCTGATTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000684177.1
ENST00000684556.1
CDS CCA 90 bp CTCAGCTCATCGTGGGATCCCAGCATGGTGGCTTGCTTCAGAAACTaGAAGCTGGTTTCAAATGTCATCTGCTGTAGCGGGGAAGAGTTT +
Preference number: 5 (lower is better)
Translates to: LSSSWDPSMVACFRN*KLVSNVICCSGEEF
Trigger: AAACTCTTCCCCGCTACAGCAGATGACATTTGAAACCAGCTTCCAGTTTCTGAAGCAAGCCACCATGCTGGGATCCCACGATGAGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CCA 90 bp CAGCACCTTCATTCTTCCACAGGGCAGAAAGGTGTTCGCGGGCACTaGTGGGTGTTAAGTATCCTCGTTTTCCTATCTGAGCTTCCTCAA +
Preference number: 5 (lower is better)
Translates to: QHLHSSTGQKGVRGH*WVLSILVFLSELPQ
Trigger: TTGAGGAAGCTCAGATAGGAAAACGAGGATACTTAACACCCACCAGTGCCCGCGAACACCTTTCTGCCCTGTGGAAGAATGAAGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS-3UTR CAA 90 bp GTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTGCCTGTTAACACTTAATTTCTaGAGCTCTTCAGCCGAATAC +
Preference number: 5 (lower is better)
Translates to: VPGHSQQKNPASLLWRCLLTLNF*SSSAEY
Trigger: GTATTCGGCTGAAGAGCTCAAGAAATTAAGTGTTAA...CAGGCACCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GCTGTCCTGTGCACCATGGCTGGAAACGTGATAGTCAACTTGCTGTTGTGTTCCTGGGACCCCAGGAGGTaGTTCTGCACAATTTCAGTT +
Preference number: 5 (lower is better)
Translates to: AVLCTMAGNVIVNLLLCSWDPRR*FCTISV
Trigger: AACTGAAATTGTGCAGAACAACCTCCTGGGGTCCCA...GGAACACAACAGCAAGTTGACTATCACGTTTCCAGCCATGGTGCACAGGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR CAA 90 bp GAAGACGGTGAACTGGCTTGTTTGGGGCAGAAGACTACAAGTTCTGTGAGGGCAAAGAGAGCAATGAGCTaGCTCTTGCTCTCACACACG +
Preference number: 5 (lower is better)
Translates to: EDGELACLGQKTTSSVRAKRAMS*LLLSHT
Trigger: CGTGTGTGAGAGCAAGAGCAAGCTCATTGCTCTCTT...TGCCCTCACAGAACTTGTAGTCTTCTGCCCCAAACAAGCCAGTTCACCGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp TCCACAGGGCAGAAAGGTGTTCGCGGGCACTGGTGGGTGTTAAGTATCCTCGTTAACGTGATAGTCAACTaGCTGTTGTGTTCCTTTCGG +
Preference number: 5 (lower is better)
Translates to: STGQKGVRGHWWVLSILVNVIVN*LLCSFR
Trigger: CCGAAAGGAACACAACAGCAAGTTGACTATCACGTT...AACGAGGATACTTAACACCCACCAGTGCCCGCGAACACCTTTCTGCCCTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR CAA 90 bp CCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTCCAGAAGAACACACTGGGATaGAATCTGGATTCCATACCA +
Preference number: 5 (lower is better)
Translates to: PKVAAVLCTVTWNCPGFQKNTLG*NLDSIP
Trigger: TGGTATGGAATCCAGATTCAATCCCAGTGTGTTCTT...CTGGAATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AGGGCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCGGAATTCCAATTTCGTaGGTGTTGATGTACATGTCT +
Preference number: 5 (lower is better)
Translates to: RACGVYGAEHRPPHQTDSGIPIS*VLMYMS
Trigger: AGACATGTACATCAACACCAACGAAATTGGAATTCC...GCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CTTTTCTGTCCATGCCAGGGAAATGTATTGCTGGTGCTAGAGGGAGAGGAAACGTGCACATTAGGGCCGTaGATGACCGCTTGCCTAAGT +
Preference number: 5 (lower is better)
Translates to: LFCPCQGNVLLVLEGEETCTLGP*MTACLS
Trigger: ACTTAGGCAAGCGGTCATCAACGGCCCTAATGTGCA...CGTTTCCTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCATGGACAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACATTCACGCGCCCCACTTaGTCCGTGAGTCCTCGGTAC +
Preference number: 5 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETFTRPT*SVSPRY
Trigger: GTACCGAGGACTCACGGACAAAGTGGGGCGCGTGAA...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AGGAATCTTGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTATGATACGTTGCCTCTaGACATCTGCCTTTGGCTTC +
Preference number: 5 (lower is better)
Translates to: RNLVCCPWPLTAKEPRFPMIRCL*TSAFGF
Trigger: GAAGCCAAAGGCAGATGTCAAGAGGCAACGTATCAT...AGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGATGGTTCACTTCCTCCTaGAACTTCAGATCAATCATG +
Preference number: 5 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRWFTSS*NFRSIM
Trigger: CATGATTGATCTGAAGTTCAAGGAGGAAGTGAACCA...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCAGCCCCTCTAGGTGCTaGATGATGCACCTTTGGAGA +
Preference number: 5 (lower is better)
Translates to: FSVNRESGLLLRGYATEASPSRC*MMHLWR
Trigger: TCTCCAAAGGTGCATCATCAAGCACCTAGAGGGGCT...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GTAAACCTTGATAAAAATCCAGAGACAGGGAGGGGCAAGGATGAGCAACTCTGTCTCATCATGGGTGTCTaGATGTTGGCGCTGGCCACC +
Preference number: 5 (lower is better)
Translates to: VNLDKNPETGRGKDEQLCLIMGV*MLALAT
Trigger: GGTGGCCAGCGCCAACATCAAGACACCCATGATGAG...ACAGAGTTGCTCATCCTTGCCCCTCCCTGTCTCTGGATTTTTATCAAGGTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TTCTCAGTGAATCGTGAATCAGGACTTCTCCTTAGGGGTTATGCCACAGAGGCCCATGGTCACTCTCCCTaGACAAAGCCTCCCTTGATC +
Preference number: 5 (lower is better)
Translates to: FSVNRESGLLLRGYATEAHGHSP*TKPPLI
Trigger: GATCAAGGGAGGCTTTGTCAAGGGAGAGTGACCATG...GGCCTCTGTGGCATAACCCCTAAGGAGAAGTCCTGATTCACGATTCACTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACAGCAGTGGAGCCGAGATaGCGCCATTGCACTCAGCCT +
Preference number: 5 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETAVEPR*RHCTQP
Trigger: AGGCTGAGTGCAATGGCGCAATCTCGGCTCCACTGC...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp TCCTGCAGCACAGGTGAGGCCCCAGCCATCTCAGGGGGACTCAGAAGACTTGGTATTTGTACATATTATTaGGGGGTAGGGCAAAGTGAA +
Preference number: 5 (lower is better)
Translates to: SCSTGEAPAISGGLRRLGICTYY*GVGQSE
Trigger: TTCACTTTGCCCTACCCCCAAATAATATGTACAAAT...ACCAAGTCTTCTGAGTCCCCCTGAGATGGCTGGGGCCTCACCTGTGCTGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp CTTTTCTGTCCATGCCAGGGAAATGTATTGCTGGTGCTAGAGGGAGAGGAAACGTTCTTCTTTCAGGCTTaGTTGAGCCCCAGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: LFCPCQGNVLLVLEGEETFFFQA*LSPRWS
Trigger: GCTCCACCTGGGGCTCAACAAAGCCTGAAAGAAGAA...CGTTTCCTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCATGGACAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS TCA 90 bp TCCGTTTTGAATTCCGACACCCCAAGAGACGTTCCACTCACCACCTaGCTATTCTTAATTCAACCTCAAGCCCGGAGTCACCACGCGATT +
Preference number: 5 (lower is better)
Translates to: SVLNSDTPRDVPLTT*LFLIQPQARSHHAI
Trigger: AATCGCGTGGTGACTCCGGGCTTGAGGTTGAATTAAGAATAGTCAGGTGGTGAGTGGAACGTCTCTTGGGGTGTCGGAATTCAAAACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263857.11
ENST00000409024.3
ENST00000409681.1
ENST00000424089.5
ENST00000683266.1
ENST00000684026.1
ENST00000684177.1
CDS TCA 90 bp CGGCACCATGGGCCAAAGATACTACCAGGGAGCTCATGTCAAAGTTaGTCTTCATCAGAGGGAGCTTCACTGTCACCTCTTCATCTTGCT +
Preference number: 5 (lower is better)
Translates to: RHHGPKILPGSSCQS*SSSEGASLSPLHLA
Trigger: AGCAAGATGAAGAGGTGACAGTGAAGCTCCCTCTGATGAAGATCAACTTTGACATGAGCTCCCTGGTAGTATCTTTGGCCCATGGTGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409681.1
CDS GCA 90 bp GGGTGTGGCCACTTCCTCTGGCAACTTCTGTTCTTGGGCCATCAATaGCAGAAGTTTTCGAATCAGAACTACATCCTTCATGACAGCCTG +
Preference number: 5 (lower is better)
Translates to: GCGHFLWQLLFLGHQ*QKFSNQNYILHDSL
Trigger: CAGGCTGTCATGAAGGATGTAGTTCTGATTCGAAAACTTCTGGCATTGATGGCCCAAGAACAGAAGTTGCCAGAGGAAGTGGCCACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000684177.1
ENST00000684556.1
CDS GCA 90 bp CCAGTGTCTACATCCACAGCTCACAGAGTTAGCACTAAGCATGTGTaGTCATCACATCAGCAACAGAGCAGCCCTGACCTCATCTGTAGT +
Preference number: 5 (lower is better)
Translates to: PVSTSTAHRVSTKHV*SSHQQQSSPDLICS
Trigger: ACTACAGATGAGGTCAGGGCTGCTCTGTTGCTGATGTGATGAGCACACATGCTTAGTGCTAACTCTGTGAGCTGTGGATGTAGACACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS CCA 90 bp GTTGATGACCGCTTGCCTAAGTTCCTGAACATTCCATGGGGTAACTaGCTGTGGGTAGGTCAGTTTTGTGGCAAACACCATGGGAATTCC +
Preference number: 5 (lower is better)
Translates to: VDDRLPKFLNIPWGN*LWVGQFCGKHHGNS
Trigger: GGAATTCCCATGGTGTTTGCCACAAAACTGACCTACCCACAGCCAGTTACCCCATGGAATGTTCAGGAACTTAGGCAAGCGGTCATCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000683266.1
ENST00000684556.1
CDS CCA 90 bp ATTAGGGCCGTTGATGACCGCTTGCCTAAGTTCCTGAACATTCCATaGGGTAACTGGCTGTGGGTAGGTCAGTTTTGTGGCAAACACCAT +
Preference number: 5 (lower is better)
Translates to: IRAVDDRLPKFLNIP*GNWLWVGQFCGKHH
Trigger: ATGGTGTTTGCCACAAAACTGACCTACCCACAGCCAGTTACCCCATGGAATGTTCAGGAACTTAGGCAAGCGGTCATCAACGGCCCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000683266.1
ENST00000684556.1
CDS CCA 90 bp CACCTTCATTCTTCCACAGGGCAGAAAGGTGTTCGCGGGCACTGGTaGGTGTTAAGTATCCTCGTTTTCCTATCTGAGCTTCCTCAATTC +
Preference number: 5 (lower is better)
Translates to: HLHSSTGQKGVRGHW*VLSILVFLSELPQF
Trigger: GAATTGAGGAAGCTCAGATAGGAAAACGAGGATACTTAACACCCACCAGTGCCCGCGAACACCTTTCTGCCCTGTGGAAGAATGAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS-3UTR CAA 90 bp GCAATGAGCTTGCTCTTGCTCTCACACACGTTCTTTACATGTGCGCCCTGGGACATAGTCAACTTGCTGTaGTGTTCCTTTCGGACAACG +
Preference number: 5 (lower is better)
Translates to: AMSLLLLSHTFFTCAPWDIVNLL*CSFRTT
Trigger: CGTTGTCCGAAAGGAACACAACAGCAAGTTGACTAT...GTCCCAGGGCGCACATGTAAAGAACGTGTGTGAGAGCAAGAGCAAGCTCATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409024.3
CDS-3UTR CAA 90 bp CTGGCCAGCTGTCCTGTGCACCATGGCTGGAAACGTGATAGTCAACTTGCTGTTAACGTGATAGTCAACTaGCTGTTGTGTTCCTTTCGG +
Preference number: 5 (lower is better)
Translates to: LASCPVHHGWKRDSQLAVNVIVN*LLCSFR
Trigger: CCGAAAGGAACACAACAGCAAGTTGACTATCACGTT...AACAGCAAGTTGACTATCACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409024.3
ENST00000424089.5
CDS-3UTR CAA 90 bp CCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGTTGTCCATCATTAGTTaGTCCATCTCGCTATCAAAC +
Preference number: 5 (lower is better)
Translates to: PVGCMGQNIGLHTKLTAELSIIS*SISLSN
Trigger: GTTTGATAGCGAGATGGACAAACTAATGATGGACAA...CTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCCTGGATTTTGTCCATCATTAGTTaGTCCATCTCGCTATCAAAC +
Preference number: 5 (lower is better)
Translates to: QAQGRCCALYCHLELPWILSIIS*SISLSN
Trigger: GTTTGATAGCGAGATGGACAAACTAATGATGGACAA...AATCCAGGGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACACAGTCCCGCCAATGGTaGGCCATCCTTGGGAACAAG +
Preference number: 5 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETQSRQW*AILGNK
Trigger: CTTGTTCCCAAGGATGGCCAACCATTGGCGGGACTG...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGAAATCCCTCTGGTCCTaGCCCAGATGGGCATCCTGC +
Preference number: 5 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGKSLWS*PRWASC
Trigger: GCAGGATGCCCATCTGGGCAAGGACCAGAGGGATTT...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp AGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTGAAACTTTGTCATTCACAGTTGAACCTTaGGCTCCCGACTGCACCATC +
Preference number: 5 (lower is better)
Translates to: RQVFTVVQLRTVVSETLSFTVEP*APDCTI
Trigger: GATGGTGCAGTCGGGAGCCAAAGGTTCAACTGTGAA...TGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGATTCTCGTTCTTATTGTaGGTTGTTTCATTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRFSFLL*VVSFRR
Trigger: CCTCCTGAATGAAACAACCAACAATAAGAACGAGAA...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTACTCTGGAGGTTCTCGTTCTTATTGTaGGTTGTTTCATTCAGGAGG +
Preference number: 5 (lower is better)
Translates to: SVVPGHSQQKNPASLLWRFSFLL*VVSFRR
Trigger: CCTCCTGAATGAAACAACCAACAATAAGAACGAGAA...CCTCCAGAGTAGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGGGGGACTCAGAAGACTaGGTAAACCTTGATAAAAAT +
Preference number: 5 (lower is better)
Translates to: PVGCMGQNIGLHTKLTAEGDSED*VNLDKN
Trigger: ATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCC...CTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AAGCCAGGCAACCTGTTCAATCGCCCCAGCAGTGACCTGGGTTCTATGTGTGGGGGGGACTCAGAAGACTaGGTAAACCTTGATAAAAAT +
Preference number: 5 (lower is better)
Translates to: KPGNLFNRPSSDLGSMCGGDSED*VNLDKN
Trigger: ATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCC...CCCACACATAGAACCCAGGTCACTGCTGGGGCGATTGAACAGGTTGCCTGGCTT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGGGTTTTACAAAGCCTTaGTATAAGTCCTCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: PVGCMGQNIGLHTKLTAEGFTKP*YKSSLS
Trigger: AGACAGAGAGGACTTATACAAAGGCTTTGTAAAACC...CTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AGGAATCTTGTCTGTTGTCCCTGGCCACTCACAGCAAAAGAACCCCGCTTCCCTATCCATCCATCAGATTaGACTTGGGCCTACTTTCCA +
Preference number: 5 (lower is better)
Translates to: RNLVCCPWPLTAKEPRFPIHPSD*TWAYFP
Trigger: TGGAAAGTAGGCCCAAGTCAAATCTGATGGATGGAT...AGGGAAGCGGGGTTCTTTTGCTGTGAGTGGCCAGGGACAACAGACAAGATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp GCCTGTGGGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGATGGTGTAGGAACTTaGGAATTTTTGACTGTAGCT +
Preference number: 5 (lower is better)
Translates to: ACGVYGAEHRPPHQTDSRDGVGT*EFLTVA
Trigger: AGCTACAGTCAAAAATTCCAAAGTTCCTACACCATC...TCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCCCACAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGTGTAGTCCCAGTTACTaGGAAGGCTGCGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGCSPSY*EGCGGR
Trigger: CCTCCCACCGCAGCCTTCCAAGTAACTGGGACTACA...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS TCA 90 bp AATTCCAATTTCGTTGGTGTTGATGTACATGTCTGGGCAGATGACTaGGCGCGCAGCGTAGTCCACTCGCTTTCCCATCATGTGTTTTCG +
Preference number: 5 (lower is better)
Translates to: NSNFVGVDVHVWADD*ARSVVHSLSHHVFS
Trigger: CGAAAACACATGATGGGAAAGCGAGTGGACTACGCTGCGCGCTCAGTCATCTGCCCAGACATGTACATCAACACCAACGAAATTGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000683266.1
ENST00000684556.1
CDS GCA 90 bp ATGGTGGCTTGCTTCAGAAACTGGAAGCTGGTTTCAAATGTCATCTaGTGTAGCGGGGAAGAGTTTGACCGGATCCCAAAGCGATTCAGT +
Preference number: 5 (lower is better)
Translates to: MVACFRNWKLVSNVI*CSGEEFDRIPKRFS
Trigger: ACTGAATCGCTTTGGGATCCGGTCAAACTCTTCCCCGCTACAGCAGATGACATTTGAAACCAGCTTCCAGTTTCTGAAGCAAGCCACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CCA 90 bp GACCGCTTGCCTAAGTTCCTGAACATTCCATGGGGTAACTGGCTGTaGGTAGGTCAGTTTTGTGGCAAACACCATGGGAATTCCAATTTC +
Preference number: 5 (lower is better)
Translates to: DRLPKFLNIPWGNWL*VGQFCGKHHGNSNF
Trigger: GAAATTGGAATTCCCATGGTGTTTGCCACAAAACTGACCTACCCACAGCCAGTTACCCCATGGAATGTTCAGGAACTTAGGCAAGCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000683266.1
ENST00000684556.1
CDS CCA 90 bp GTGGGTGGATTCTTCAATGATACGTTGCCTCTTGACATCTGCCTTTaGCTTCACCAAAATGTCTTCCACGCCCAAGGTGAAGCCTCTGTA +
Preference number: 5 (lower is better)
Translates to: VGGFFNDTLPLDICL*LHQNVFHAQGEASV
Trigger: TACAGAGGCTTCACCTTGGGCGTGGAAGACATTTTGGTGAAGCCAAAGGCAGATGTCAAGAGGCAACGTATCATTGAAGAATCCACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CCA 90 bp TCTTCCATACAGAAGGACTCCTGGACGTCAATTTTCTGCAACACCTaGAACCAGACGGACAGAGAGAACTTGACTTGTTCAGGTCCTAGG +
Preference number: 5 (lower is better)
Translates to: SSIQKDSWTSIFCNT*NQTDRENLTCSGPR
Trigger: CCTAGGACCTGAACAAGTCAAGTTCTCTCTGTCCGTCTGGTTCCAGGTGTTGCAGAAAATTGACGTCCAGGAGTCCTTCTGTATGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492034.1
CDS-3UTR CAA 90 bp GTAAACCTTGATAAAAATCCAGAGACAGGGAGGGGCAAGGATGAGCAACTCTGTTCCTCCAGGTCCGTTTaGAATTCCGACACCCCAAGA +
Preference number: 5 (lower is better)
Translates to: VNLDKNPETGRGKDEQLCSSRSV*NSDTPR
Trigger: TCTTGGGGTGTCGGAATTCAAAACGGACCTGGAGGA...ACAGAGTTGCTCATCCTTGCCCCTCCCTGTCTCTGGATTTTTATCAAGGTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CTGCTTTCAGGCCCAAGGTCGCTGCTGTGCTCTGTACTGTCACTTGGAACTGCCTTAACACTTAATTTCTaGAGCTCTTCAGCCGAATAC +
Preference number: 5 (lower is better)
Translates to: LLSGPRSLLCSVLSLGTALTLNF*SSSAEY
Trigger: GTATTCGGCTGAAGAGCTCAAGAAATTAAGTGTTAA...GGCAGTTCCAAGTGACAGTACAGAGCACAGCAGCGACCTTGGGCCTGAAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACACTTCTCAGCAGGGTGTaGGGGTGCTTGCTTTGCCAT +
Preference number: 5 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETLLSRV*GCLLCH
Trigger: ATGGCAAAGCAAGCACCCCAACACCCTGCTGAGAAG...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GTAAACCTTGATAAAAATCCAGAGACAGGGAGGGGCAAGGATGAGCAACTCTGTTCAATGCCATACGTGTaGGCTATGGCGTGGATGTCG +
Preference number: 5 (lower is better)
Translates to: VNLDKNPETGRGKDEQLCSMPYV*AMAWMS
Trigger: CGACATCCACGCCATAGCCAACACGTATGGCATTGA...ACAGAGTTGCTCATCCTTGCCCCTCCCTGTCTCTGGATTTTTATCAAGGTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACATATCTCAGAGGCTGCTaGAGCTCGAACAGGCCTGTC +
Preference number: 5 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETYLRGC*SSNRPV
Trigger: GACAGGCCTGTTCGAGCTCAAGCAGCCTCTGAGATA...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp AGTCAACTTGCTGTTGTGTTCCTTTCGGACAACGGATCGCCCGGTCATGTGCGCATTTTCTTCCAGAAATaGAGCTCTTCAGCCGAATAC +
Preference number: 5 (lower is better)
Translates to: SQLAVVFLSDNGSPGHVRIFFQK*SSSAEY
Trigger: GTATTCGGCTGAAGAGCTCAATTTCTGGAAGAAAAT...GCGCACATGACCGGGCGATCCGTTGTCCGAAAGGAACACAACAGCAAGTTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424089.5
CDS GCA 90 bp AAGCCACTTTCTATCAAGAGCCCTTCTTATATCCCTGTCTTGTCTTaGCCACATCCTCACTATGTTCTTGCTTGGGAGCCAACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: KPLSIKSPSYIPVLS*PHPHYVLAWEPTAS
Trigger: GGAAGCAGTTGGCTCCCAAGCAAGAACATAGTGAGGATGTGGGCAAGACAAGACAGGGATATAAGAAGGGCTCTTGATAGAAAGTGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483538.1
CDS GCA 90 bp AGCTGCGATAATTGTCAAGTTTTTGGTGCTGGGTATGACCTCTCCTaGTCTATGACTCAATGTCAATGTGCCCTGAAGACTGCCCCAAAC +
Preference number: 5 (lower is better)
Translates to: SCDNCQVFGAGYDLS*SMTQCQCALKTAPN
Trigger: GTTTGGGGCAGTCTTCAGGGCACATTGACATTGAGTCATAGAGCAGGAGAGGTCATACCCAGCACCAAAAACTTGACAATTATCGCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS CCA 90 bp TCATCTGTAGTGGGTGTGGCCACTTCCTCTGGCAACTTCTGTTCTTaGGCCATCAATGCCAGAAGTTTTCGAATCAGAACTACATCCTTC +
Preference number: 5 (lower is better)
Translates to: SSVVGVATSSGNFCS*AINARSFRIRTTSF
Trigger: GAAGGATGTAGTTCTGATTCGAAAACTTCTGGCATTGATGGCCCAAGAACAGAAGTTGCCAGAGGAAGTGGCCACACCCACTACAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000684177.1
ENST00000684556.1
CDS-3UTR CAA 90 bp CTTTTCTGTCCATGCCAGGGAAATGTATTGCTGGTGCTAGAGGGAGAGGAAACGCTAATGCCTGGGTACTaGTCCATCATTAGTTTGTCC +
Preference number: 5 (lower is better)
Translates to: LFCPCQGNVLLVLEGEETLMPGY*SIISLS
Trigger: GGACAAACTAATGATGGACAAGTACCCAGGCATTAG...CGTTTCCTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCATGGACAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACATGCACATTAGGGCCGTaGATGACCGCTTGCCTAAGT +
Preference number: 5 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETCTLGP*MTACLS
Trigger: ACTTAGGCAAGCGGTCATCAACGGCCCTAATGTGCA...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGAAGAACTCAGGAGGTTaGATGCCGGTGAGGAACCTG +
Preference number: 5 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGKNSGG*MPVRNL
Trigger: CAGGTTCCTCACCGGCATCAAACCTCCTGAGTTCTT...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp CCATCTCAGGGGGACTCAGAAGACTTGGTAAACCTTGATAAAAATCCAGAGACATCCCAGCATGGTGGCTaGCTTCAGAAACTGGAAGCT +
Preference number: 5 (lower is better)
Translates to: PSQGDSEDLVNLDKNPETSQHGG*LQKLEA
Trigger: AGCTTCCAGTTTCTGAAGCAAGCCACCATGCTGGGA...TGTCTCTGGATTTTTATCAAGGTTTACCAAGTCTTCTGAGTCCCCCTGAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GCTCAGTGTCTTGCCCAAAACGCAGCCTCACTGCTCAATCACATTCTTGAGGTTTATGCTACGCTGTACTaGACTCAGGGAAGAAGTCTT +
Preference number: 5 (lower is better)
Translates to: AQCLAQNAASLLNHILEVYATLY*TQGRSL
Trigger: AAGACTTCTTCCCTGAGTCAAGTACAGCGTAGCATA...AACCTCAAGAATGTGATTGAGCAGTGAGGCTGCGTTTTGGGCAAGACACTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp CTTTTCTGTCCATGCCAGGGAAATGTATTGCTGGTGCTAGAGGGAGAGGAAACGTATGCTACGCTGTACTaGACTCAGGGAAGAAGTCTT +
Preference number: 5 (lower is better)
Translates to: LFCPCQGNVLLVLEGEETYATLY*TQGRSL
Trigger: AAGACTTCTTCCCTGAGTCAAGTACAGCGTAGCATA...CGTTTCCTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCATGGACAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCGGTTTTACAAAGCCTTaGTATAAGTCCTCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSGFTKP*YKSSLS
Trigger: AGACAGAGAGGACTTATACAAAGGCTTTGTAAAACC...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS GCA 90 bp CCCTGGTCACTGGGTACAGTTATCCCATGGTCTTTTCTTGGAAACTaGACTAAGGCATGCACATGGCTGATGTCTTTTACACTAAGGAGT +
Preference number: 5 (lower is better)
Translates to: PWSLGTVIPWSFLGN*TKACTWLMSFTLRS
Trigger: ACTCCTTAGTGTAAAAGACATCAGCCATGTGCATGCCTTAGTGCAGTTTCCAAGAAAAGACCATGGGATAACTGTACCCAGTGACCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS CCA 90 bp AGGTCTCACAAGAGACAGAGCTCAGATGCAAACTCAGGTCTACTTTaGGAAGCCAGAAGTATATGCAAAGGACAACACAGAGGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: RSHKRQSSDANSGLL*EARSICKGQHRGKV
Trigger: CACTTTCCCTCTGTGTTGTCCTTTGCATATACTTCTGGCTTCCCAAAGTAGACCTGAGTTTGCATCTGAGCTCTGTCTCTTGTGAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683470.1
CDS-3UTR CAA 90 bp GGGTGTATGGGGCAGAACATAGGCCTCCACACCAAACTGACAGCAGAGAAAAGCTGGTACACCTGGAATTaGTTCTGTTTTTCTTCCATA +
Preference number: 5 (lower is better)
Translates to: GCMGQNIGLHTKLTAEKSWYTWN*FCFSSI
Trigger: TATGGAAGAAAAACAGAACAAATTCCAGGTGTACCA...GCTTTTCTCTGCTGTCAGTTTGGTGTGGAGGCCTATGTTCTGCCCCATACACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp TTCATGTTTCCAAGCAAGAATCATGGGTTGGGGAAGGCAAGTGTTTACTGTGGTAAGCATGGCTTCCCCTaGGTCTTCTCAGTGAATCGT +
Preference number: 5 (lower is better)
Translates to: FMFPSKNHGLGKASVYCGKHGFP*VFSVNR
Trigger: ACGATTCACTGAGAAGACCAAGGGGAAGCCATGCTT...ACCACAGTAAACACTTGCCTTCCCCAACCCATGATTCTTGCTTGGAAACATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp CTTTACATGTGCGCCCTGGGACCCCAGGAGGTTGTTCTGCACAATTTCAGTTGTATTTTCTTCCAGAAATaGAGCTCTTCAGCCGAATAC +
Preference number: 5 (lower is better)
Translates to: LYMCALGPQEVVLHNFSCIFFQK*SSSAEY
Trigger: GTATTCGGCTGAAGAGCTCAATTTCTGGAAGAAAAT...ACAACTGAAATTGTGCAGAACAACCTCCTGGGGTCCCAGGGCGCACATGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409024.3
CDS GCA 90 bp AATGCCAGAAGTTTTCGAATCAGAACTACATCCTTCATGACAGCCTaGAAGTTCACCGTCTGGCCATTAGTAAACATCTGGTCTCCTAGG +
Preference number: 5 (lower is better)
Translates to: NARSFRIRTTSFMTA*KFTVWPLVNIWSPR
Trigger: CCTAGGAGACCAGATGTTTACTAATGGCCAGACGGTGAACTTGCAGGCTGTCATGAAGGATGTAGTTCTGATTCGAAAACTTCTGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000684177.1
ENST00000684556.1
CDS CCA 90 bp GCTTTCCCAGTGATTTTCGCCTTTCCAGATAAGTTCAGTGGGATGTaGTCCTCTGGGATTATATTTATGAGCAGCGTTGACACAACCTGT +
Preference number: 5 (lower is better)
Translates to: AFPVIFAFPDKFSGM*SSGIIFMSSVDTTC
Trigger: ACAGGTTGTGTCAACGCTGCTCATAAATATAATCCCAGAGGACCACATCCCACTGAACTTATCTGGAAAGGCGAAAATCACTGGGAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000483538.1
ENST00000683266.1
CDS CCA 90 bp TACACCTGGAATTTGTTCTGTTTTTCTTCCATACAGAAGGACTCCTaGACGTCAATTTTCTGCAACACCTGGAACCAGACGGACAGAGAG +
Preference number: 5 (lower is better)
Translates to: YTWNLFCFSSIQKDS*TSIFCNTWNQTDRE
Trigger: CTCTCTGTCCGTCTGGTTCCAGGTGTTGCAGAAAATTGACGTCCAGGAGTCCTTCTGTATGGAAGAAAAACAGAACAAATTCCAGGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492034.1
CDS CCA 90 bp ATTTTTAAGGGACATCAACCCTGGTCACTGGGTACAGTTATCCCATaGTCTTTTCTTGGAAACTGCACTAAGGCATGCACATGGCTGATG +
Preference number: 5 (lower is better)
Translates to: IFKGHQPWSLGTVIP*SFLGNCTKACTWLM
Trigger: CATCAGCCATGTGCATGCCTTAGTGCAGTTTCCAAGAAAAGACCATGGGATAACTGTACCCAGTGACCAGGGTTGATGTCCCTTAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS-3UTR CAA 90 bp CTTTTCTGTCCATGCCAGGGAAATGTATTGCTGGTGCTAGAGGGAGAGGAAACGGGAATTCCAATTTCGTaGGTGTTGATGTACATGTCT +
Preference number: 5 (lower is better)
Translates to: LFCPCQGNVLLVLEGEETGIPIS*VLMYMS
Trigger: AGACATGTACATCAACACCAACGAAATTGGAATTCC...CGTTTCCTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCATGGACAGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS-3UTR CAA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGTTGAGCTGCCCACTCTaGACTGTAGTCATCAACCTT +
Preference number: 5 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGLSCPL*TVVINL
Trigger: AAGGTTGATGACTACAGTCAAGAGTGGGCAGCTCAA...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp AGGCAAGTGTTTACTGTGGTCCAGCTGAGGACTGTGGTGTCTGAAACTTTGTCATGCTCAATCACATTCTaGAGGTTTGATTGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: RQVFTVVQLRTVVSETLSCSITF*RFDWLN
Trigger: GTTCAGCCAATCAAACCTCAAGAATGTGATTGAGCA...TGACAAAGTTTCAGACACCACAGTCCTCAGCTGGACCACAGTAAACACTTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS TCA 90 bp GGGTGTATAGAGCTTTTAGCTTCCGTGACGAAGTCTTTCAAACCATaGGCTTGCAACCTCCCATTTTATGATTGCTTTCGTCTTCTTCCG +
Preference number: 5 (lower is better)
Translates to: GCIELLASVTKSFKP*ACNLPFYDCFRLLP
Trigger: CGGAAGAAGACGAAAGCAATCATAAAATGGGAGGTTGCAAGCTCATGGTTTGAAAGACTTCGTCACGGAAGCTAAAAGCTCTATACACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409681.1
CDS GCA 90 bp TTCTGTTTTTCTTCCATACAGAAGGACTCCTGGACGTCAATTTTCTaGAACACCTGGAACCAGACGGACAGAGAGAACTTGACTTGTTCA +
Preference number: 5 (lower is better)
Translates to: FCFSSIQKDSWTSIF*NTWNQTDRENLTCS
Trigger: TGAACAAGTCAAGTTCTCTCTGTCCGTCTGGTTCCAGGTGTTGCAGAAAATTGACGTCCAGGAGTCCTTCTGTATGGAAGAAAAACAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492034.1
CDS CCA 90 bp TCTATGACTCAATGTCAATGTGCCCTGAAGACTGCCCCAAACCTCTaGATCAGTTCCAGGAGGAAGCTACAATCACTACAACTTAAAAGA +
Preference number: 5 (lower is better)
Translates to: SMTQCQCALKTAPNL*ISSRRKLQSLQLKR
Trigger: TCTTTTAAGTTGTAGTGATTGTAGCTTCCTCCTGGAACTGATCCAGAGGTTTGGGGCAGTCTTCAGGGCACATTGACATTGAGTCATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS-3UTR CAA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGATAGTCAACTTGCTGTaGTGTTCCTTTCGGACAACG +
Preference number: 5 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGIVNLL*CSFRTT
Trigger: CGTTGTCCGAAAGGAACACAACAGCAAGTTGACTAT...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp TTTAAAAACCAGACATGCTGTCTTAATACTCATCCATCAGGAAAGACACAGGAATGGGGTTTTGCCATGTaGGCCAGGGTGGTCTCGAAT +
Preference number: 5 (lower is better)
Translates to: FKNQTCCLNTHPSGKTQEWGFAM*ARVVSN
Trigger: ATTCGAGACCACCCTGGCCAACATGGCAAAACCCCA...TTCCTGTGTCTTTCCTGATGGATGAGTATTAAGACAGCATGTCTGGTTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS GCA 90 bp TCTCAAACCCTGGTGAAAGGTTTAGTAACAGTATCTGCTATGGACTaGCATGCATGTAACTTCCTCAATTCTAGGCAAGAGGCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: SQTLVKGLVTVSAMD*HACNFLNSRQEALG
Trigger: TCCTAAAGCCTCTTGCCTAGAATTGAGGAAGTTACATGCATGGCAGTCCATAGCAGATACTGTTACTAAACCTTTCACCAGGGTTTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS-3UTR CAA 90 bp GAAGATTTTCTAATGCCTAGGCCACACTCCAGGCCAATAAAATCAGAATCTGGGTTCTTCAATGATACGTaGCCTCTTGACATCTGCCTT +
Preference number: 5 (lower is better)
Translates to: EDFLMPRPHSRPIKSESGFFNDT*PLDICL
Trigger: AAGGCAGATGTCAAGAGGCAACGTATCATTGAAGAA...CCCAGATTCTGATTTTATTGGCCTGGAGTGTGGCCTAGGCATTAGAAAATCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp TTTAAAAACCAGACATGCTGTCTTAATACTCATCCATCAGGAAAGACACAGGAATCCCAGCATGGTGGCTaGCTTCAGAAACTGGAAGCT +
Preference number: 5 (lower is better)
Translates to: FKNQTCCLNTHPSGKTQESQHGG*LQKLEA
Trigger: AGCTTCCAGTTTCTGAAGCAAGCCACCATGCTGGGA...TTCCTGTGTCTTTCCTGATGGATGAGTATTAAGACAGCATGTCTGGTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp TTTAAAAACCAGACATGCTGTCTTAATACTCATCCATCAGGAAAGACACAGGAATGCCAGGGAAATGTATaGCTGGTGCTAGAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: FKNQTCCLNTHPSGKTQECQGNV*LVLEGE
Trigger: CTCTCCCTCTAGCACCAGCAATACATTTCCCTGGCA...TTCCTGTGTCTTTCCTGATGGATGAGTATTAAGACAGCATGTCTGGTTTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS GCA 90 bp TTATATAGAGTTAGAAATGGAAACGCCTCAAAACAGCCTTCTATCTaGCACTCAGAAAAAGTGGCAGAGCCAAGTGACAATTGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: LYRVRNGNASKQPSI*HSEKVAEPSDNCRL
Trigger: CAACCTGCAATTGTCACTTGGCTCTGCCACTTTTTCTGAGTGGCAGATAGAAGGCTGTTTTGAGGCGTTTCCATTTCTAACTCTATATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS GCA 90 bp TTTAGTCCAGGCCATGCCAGAGTGTTCAATGTAAAACATACATCATaGATCTCCAGGAGGGGATCTTATTTCCATGCTTATCCCATATTC +
Preference number: 5 (lower is better)
Translates to: FSPGHARVFNVKHTS*ISRRGSYFHAYPIF
Trigger: GAATATGGGATAAGCATGGAAATAAGATCCCCTCCTGGAGATGCATGATGTATGTTTTACATTGAACACTCTGGCATGGCCTGGACTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS-3UTR CAA 90 bp AAAGAACACACTGGGATTGAATCTGGATTCCATACCATCATCATCCATTCCCGAAAGAACACACTGGGATaGAATCTGGATTCCATACCA +
Preference number: 5 (lower is better)
Translates to: KEHTGIESGFHTIIIHSRKNTLG*NLDSIP
Trigger: TGGTATGGAATCCAGATTCAATCCCAGTGTGTTCTT...TCGGGAATGGATGATGATGGTATGGAATCCAGATTCAATCCCAGTGTGTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424089.5
CDS-3UTR CAA 90 bp GTAAACCTTGATAAAAATCCAGAGACAGGGAGGGGCAAGGATGAGCAACTCTGTAAGGATGTGGAGAAATaGAAATTGTTGTACACCGTT +
Preference number: 5 (lower is better)
Translates to: VNLDKNPETGRGKDEQLCKDVEK*KLLYTV
Trigger: AACGGTGTACAACAATTTCAATTTCTCCACATCCTT...ACAGAGTTGCTCATCCTTGCCCCTCCCTGTCTCTGGATTTTTATCAAGGTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS-3UTR CAA 90 bp TTCATGTTTCCAAGCAAGAATCATGGGTTGGGGAAGGCAAGTGTTTACTGTGGTCTAAAAATTTTAAGATaGGCAAGCAACAGACACTCC +
Preference number: 5 (lower is better)
Translates to: FMFPSKNHGLGKASVYCGLKILR*ASNRHS
Trigger: GGAGTGTCTGTTGCTTGCCAATCTTAAAATTTTTAG...ACCACAGTAAACACTTGCCTTCCCCAACCCATGATTCTTGCTTGGAAACATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS TCA 90 bp ACAGAGGTTATAGTCAGCGTTCCACAACATACTCTCACAAGGGCTTaGATATACTGCGTAGGTTTTGTTATACACTCAAAAGGAAAGAAG +
Preference number: 5 (lower is better)
Translates to: TEVIVSVPQHTLTRA*IYCVGFVIHSKGKK
Trigger: CTTCTTTCCTTTTGAGTGTATAACAAAACCTACGCAGTATATTCAAGCCCTTGTGAGAGTATGTTGTGGAACGCTGACTATAACCTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS TCA 90 bp ACTTGTCCATCATTAGTTTGTCCATCTCGCTATCAAACACAATATTaGCGTGGCTCTGAAGGCGAATCCAAATGTTGTAAAGTTTGTCTA +
Preference number: 5 (lower is better)
Translates to: TCPSLVCPSRYQTQY*RGSEGESKCCKVCL
Trigger: TAGACAAACTTTACAACATTTGGATTCGCCTTCAGAGCCACGTCAATATTGTGTTTGATAGCGAGATGGACAAACTAATGATGGACAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000684556.1
CDS GCA 72 bp CTGGGAGATGGCCAGGCGGCTGCGCTGACGGGTCACTaGCCCAGGGCAGCGAGCCCGGCACTTACCCAAGGT +
Preference number: 6 (lower is better)
Translates to: LGDGQAAALTGH*PRAASPALTQG
Trigger: ACCTTGGGTAAGTGCCGGGCTCGCTGCCCTGGGGCAGTGACCCGTCAGCGCAGCCGCCTGGCCATCTCCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683266.1
CDS CCA 72 bp CTCCCGCAACCTGAAGGGCCAGGGCCCAGGGCCACGTaGGGGCACGTTCTATGTGAATGGCTCCCCTGGAGT +
Preference number: 6 (lower is better)
Translates to: LPQPEGPGPRAT*GHVLCEWLPWS
Trigger: ACTCCAGGGGAGCCATTCACATAGAACGTGCCCCCACGTGGCCCTGGGCCCTGGCCCTTCAGGTTGCGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462078.1
CDS CAA 90 bp GAGCTGGGCAGATGGTGCCGGGGTAGCTGCTATCTCAGAGGCTGCTaGAGCTCGAACAGGCCTGTCCCGCCCCTGACGACCTTCCCGACC +
Preference number: 6 (lower is better)
Translates to: ELGRWCRGSCYLRGC*SSNRPVPPLTTFPT
Trigger: GGTCGGGAAGGTCGTCAGGGGCGGGACAGGCCTGTTCGAGCTCAAGCAGCCTCTGAGATAGCAGCTACCCCGGCACCATCTGCCCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS GCA 72 bp AGGCCCACAGCCTCGCCCGGCTCACACAGTGAGCGCTaGCACTTCAGCTGCAGCAAGGTCCTCAACCTGTCG +
Preference number: 6 (lower is better)
Translates to: RPTASPGSHSER*HFSCSKVLNLS
Trigger: CGACAGGTTGAGGACCTTGCTGCAGCTGAAGTGGCAGCGCTCACTGTGTGAGCCGGGCGAGGCTGTGGGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS GCA 72 bp GGCAGATGGTGCCGGGGTAGCTGCTATCTCAGAGGCTaGTTGAGCTCGAACAGGCCTGTCCCGCCCCTGACG +
Preference number: 6 (lower is better)
Translates to: GRWCRGSCYLRG*LSSNRPVPPLT
Trigger: CGTCAGGGGCGGGACAGGCCTGTTCGAGCTCAAGCAGCCTCTGAGATAGCAGCTACCCCGGCACCATCTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CCA 72 bp AGGCTGGGCCACGCCCTCACCAAGGGTCCTTGGAGCTaGGCAGATGGTGCCGGGGTAGCTGCTATCTCAGAG +
Preference number: 6 (lower is better)
Translates to: RLGHALTKGPWS*ADGAGVAAISE
Trigger: CTCTGAGATAGCAGCTACCCCGGCACCATCTGCCCAGCTCCAAGGACCCTTGGTGAGGGCGTGGCCCAGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS GCA 72 bp GTTGGCCATCCTTGGGAACAAGGTACTGCTGATCAGTaGAGGCCAGGACGTAGGCCTCGGCCCGGCCCAGCT +
Preference number: 6 (lower is better)
Translates to: VGHPWEQGTADQ*RPGRRPRPGPA
Trigger: AGCTGGGCCGGGCCGAGGCCTACGTCCTGGCCTGCACTGATCAGCAGTACCTTGTTCCCAAGGATGGCCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000683266.1
CDS GCA 72 bp GGGGAGCTTCCTCCTAGGGATGGGCTCCTGTGTCAGTaGGCACCGGAGCCACACCTGATGGCCACCAATCAC +
Preference number: 6 (lower is better)
Translates to: GELPPRDGLLCQ*APEPHLMATNH
Trigger: GTGATTGGTGGCCATCAGGTGTGGCTCCGGTGCGCACTGACACAGGAGCCCATCCCTAGGAGGAAGCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684556.1
CDS CCA 72 bp GACCCAGCCTGCTCACCCAGGGGCTCAGAGTCCTTCTaGCCAGCTGTCCTGTGCACCATGGCTGGAAACGTG +
Preference number: 6 (lower is better)
Translates to: DPACSPRGSESF*PAVLCTMAGNV
Trigger: CACGTTTCCAGCCATGGTGCACAGGACAGCTGGCCAGAAGGACTCTGAGCCCCTGGGTGAGCAGGCTGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS CAA 72 bp AGATGGTGCCGGGGTAGCTGCTATCTCAGAGGCTGCTaGAGCTCGAACAGGCCTGTCCCGCCCCTGACGACC +
Preference number: 6 (lower is better)
Translates to: RWCRGSCYLRGC*SSNRPVPPLTT
Trigger: GGTCGTCAGGGGCGGGACAGGCCTGTTCGAGCTCAAGCAGCCTCTGAGATAGCAGCTACCCCGGCACCATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS GCA 72 bp TCAACCTCAAGCCCGGAGTCACCACGCGATTCAACGTaGGCTTGCGCGCGGAAGCGGTCGCAGGAACGACAT +
Preference number: 6 (lower is better)
Translates to: STSSPESPRDST*ACARKRSQERH
Trigger: ATGTCGTTCCTGCGACCGCTTCCGCGCGCAAGCGCACGTTGAATCGCGTGGTGACTCCGGGCTTGAGGTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409681.1
CDS CCA 72 bp CCCGCAGCGCGGCCTCAATGCCATACGTGTTGGCTATaGCGTGGATGTCGTTGGAGTAGAGGCGGCGCAGAT +
Preference number: 6 (lower is better)
Translates to: PAARPQCHTCWL*RGCRWSRGGAD
Trigger: ATCTGCGCCGCCTCTACTCCAACGACATCCACGCCATAGCCAACACGTATGGCATTGAGGCCGCGCTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000471427.1
CDS CCA 72 bp CGATCACCCGCAGCGCGGCCTCAATGCCATACGTGTTaGCTATGGCGTGGATGTCGTTGGAGTAGAGGCGGC +
Preference number: 6 (lower is better)
Translates to: RSPAARPQCHTC*LWRGCRWSRGG
Trigger: GCCGCCTCTACTCCAACGACATCCACGCCATAGCCAACACGTATGGCATTGAGGCCGCGCTGCGGGTGATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000471427.1
CDS CAA 72 bp CTCAAGCCCGGAGTCACCACGCGATTCAACGTGCGCTaGCGCGCGGAAGCGGTCGCAGGAACGACATTTACG +
Preference number: 6 (lower is better)
Translates to: LKPGVTTRFNVR*RAEAVAGTTFT
Trigger: CGTAAATGTCGTTCCTGCGACCGCTTCCGCGCGCAAGCGCACGTTGAATCGCGTGGTGACTCCGGGCTTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409681.1
CDS CAA 90 bp TGGGTCATGTCCACAGCGCTCAGGGCTGTGCGGCTGCCGTCCTCATaGATGACCATGGAGGCTCCTGGGTGCACATTAGGGCCGTTGATG +
Preference number: 6 (lower is better)
Translates to: WVMSTALRAVRLPSS*MTMEAPGCTLGPLM
Trigger: CATCAACGGCCCTAATGTGCACCCAGGAGCCTCCATGGTCATCAATGAGGACGGCAGCCGCACAGCCCTGAGCGCTGTGGACATGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000683266.1
ENST00000684556.1
CDS TCA 72 bp ATGGGCTCCTGTGTCAGTGCGCACCGGAGCCACACCTaGTGGCCACCAATCACCAGAATCCGAACAGGAGCC +
Preference number: 6 (lower is better)
Translates to: MGSCVSAHRSHT*WPPITRIRTGA
Trigger: GGCTCCTGTTCGGATTCTGGTGATTGGTGGCCATCAGGTGTGGCTCCGGTGCGCACTGACACAGGAGCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684556.1
CDS TCA 72 bp CTGGCAGACAGCGGGACTGTCGCAGCGGCTGGAGTCTaGGAACCCGGACTGTCTACCCAAGGCTGCCTATTT +
Preference number: 6 (lower is better)
Translates to: LADSGTVAAAGV*EPGLSTQGCLF
Trigger: AAATAGGCAGCCTTGGGTAGACAGTCCGGGTTCTCAGACTCCAGCCGCTGCGACAGTCCCGCTGTCTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS GCA 72 bp TCAAGCCCGGAGTCACCACGCGATTCAACGTGCGCTTaGGCGCGGAAGCGGTCGCAGGAACGACATTTACGT +
Preference number: 6 (lower is better)
Translates to: SSPESPRDSTCA*ARKRSQERHLR
Trigger: ACGTAAATGTCGTTCCTGCGACCGCTTCCGCGCGCAAGCGCACGTTGAATCGCGTGGTGACTCCGGGCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409681.1
CDS CCA 72 bp GCGGCTGCCGTCCTCATTGATGACCATGGAGGCTCCTaGGTGCACATTAGGGCCGTTGATGACCGCTTGCCT +
Preference number: 6 (lower is better)
Translates to: AAAVLIDDHGGS*VHIRAVDDRLP
Trigger: AGGCAAGCGGTCATCAACGGCCCTAATGTGCACCCAGGAGCCTCCATGGTCATCAATGAGGACGGCAGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000683266.1
ENST00000684556.1
CDS CCA 72 bp GGGTGGCCAAGTGAGGGCGCCTTTGTAGGAGGAGCCTaGTTACTTCCCAGCTCCTTCCCGAGAGGACACAGA +
Preference number: 6 (lower is better)
Translates to: GWPSEGAFVGGA*LLPSSFPRGHR
Trigger: TCTGTGTCCTCTCGGGAAGGAGCTGGGAAGTAACCAGGCTCCTCCTACAAAGGCGCCCTCACTTGGCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683266.1
CDS CAA 72 bp GGGTCGACCGCGATGCCATACACGGCAAACACATCCTaGATCTCCTTCTCGATCACCCGCAGCGCGGCCTCA +
Preference number: 6 (lower is better)
Translates to: GSTAMPYTANTS*ISFSITRSAAS
Trigger: TGAGGCCGCGCTGCGGGTGATCGAGAAGGAGATCAAGGATGTGTTTGCCGTGTATGGCATCGCGGTCGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000471427.1
CDS TCA 72 bp GGAGCTCAATGTGGCCCAGGTGCCCAGAACAGTTGCTaGAGTCCTGCACGCAGGTGGAGCACACCTCTTTGG +
Preference number: 6 (lower is better)
Translates to: GAQCGPGAQNSC*SPARRWSTPLW
Trigger: CCAAAGAGGTGTGCTCCACCTGCGTGCAGGACTTCAGCAACTGTTCTGGGCACCTGGGCCACATTGAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000684026.1
ENST00000684177.1
ENST00000684556.1
CDS TCA 72 bp CCGACTTCCAGAACCCTCAGCTGGCAGAGTAAGAGGTaGATCACGGCCCGGGGACAAGTCAGCATGTGGCAG +
Preference number: 6 (lower is better)
Translates to: PTSRTLSWQSKR*ITARGQVSMWQ
Trigger: CTGCCACATGCTGACTTGTCCCCGGGCCGTGATTCACCTCTTACTCTGCCAGCTGAGGGTTCTGGAAGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000683470.1
ENST00000684026.1
ENST00000684177.1
ENST00000684556.1
CDS TCA 72 bp GGAACTGCACCACACTGCCGTCACTGTCACGGACCGTaGGATCATACTGCACGACCAGCCCCTCTAGGTGCT +
Preference number: 6 (lower is better)
Translates to: GTAPHCRHCHGP*DHTARPAPLGA
Trigger: AGCACCTAGAGGGGCTGGTCGTGCAGTATGATCTCACGGTCCGTGACAGTGACGGCAGTGTGGTGCAGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS TCA 72 bp ACAGGCTCTCCTCGGTGTCGTACTGGTAGTCATCTATaGACGGGTGGATCTCACGCACAGCCTGGACCCGGC +
Preference number: 6 (lower is better)
Translates to: TGSPRCRTGSHL*TGGSHAQPGPG
Trigger: GCCGGGTCCAGGCTGTGCGTGAGATCCACCCGTTCATAGATGACTACCAGTACGACACCGAGGAGAGCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS TCA 72 bp GGTCGACCGCGATGCCATACACGGCAAACACATCCTTaGTCTCCTTCTCGATCACCCGCAGCGCGGCCTCAA +
Preference number: 6 (lower is better)
Translates to: GRPRCHTRQTHP*SPSRSPAARPQ
Trigger: TTGAGGCCGCGCTGCGGGTGATCGAGAAGGAGATCAAGGATGTGTTTGCCGTGTATGGCATCGCGGTCGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000471427.1
CDS GCA 72 bp TCGCCCGGCTCACACAGTGAGCGCTGCCACTTCAGCTaGAGCAAGGTCCTCAACCTGTCGAGAGAAAGCTCT +
Preference number: 6 (lower is better)
Translates to: SPGSHSERCHFS*SKVLNLSRESS
Trigger: AGAGCTTTCTCTCGACAGGTTGAGGACCTTGCTGCAGCTGAAGTGGCAGCGCTCACTGTGTGAGCCGGGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CCA 72 bp GCCATCAGCGGGGGTCTCCGACCTTCCAGTTCAATCTaGCCCAGCAGGCACGAGATCTGCATCGTGTTCACA +
Preference number: 6 (lower is better)
Translates to: AISGGLRPSSSI*PSRHEICIVFT
Trigger: TGTGAACACGATGCAGATCTCGTGCCTGCTGGGCCAGATTGAACTGGAAGGTCGGAGACCCCCGCTGATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CAA 90 bp TTCTTGGTGTTGAGCACGGGCACGCTCATCATGGGTGTCTTGATGTaGGCGCTGGCCACCATGAGAATCTCCCGCAACCTGAAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: FLVLSTGTLIMGVLM*ALATMRISRNLKGQ
Trigger: CTGGCCCTTCAGGTTGCGGGAGATTCTCATGGTGGCCAGCGCCAACATCAAGACACCCATGATGAGCGTGCCCGTGCTCAACACCAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462078.1
CDS GCA 72 bp AGGAAGGAAGGGATTTATTTAGAGGGCCTGGCCTTCTaGTCCCTTCTGCCTGCGTATCTCCCCCTGGCCGCT +
Preference number: 6 (lower is better)
Translates to: RKEGIYLEGLAF*SLLPAYLPLAA
Trigger: AGCGGCCAGGGGGAGATACGCAGGCAGAAGGGAGCAGAAGGCCAGGCCCTCTAAATAAATCCCTTCCTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471427.1
CDS GCA 72 bp CCCACGCTGAGGCTGCTCACTTTCCTCCACATCACCTaGTCCCCAGGGTTACTGATCTGTGTCACTTGCAGC +
Preference number: 6 (lower is better)
Translates to: PTLRLLTFLHIT*SPGLLICVTCS
Trigger: GCTGCAAGTGACACAGATCAGTAACCCTGGGGAGCAGGTGATGTGGAGGAAAGTGAGCAGCCTCAGCGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS GCA 72 bp CCTAAGCCCAGAGCTCACACTAAGGCTGCTGCCAGCTaGACAGAACATCCCAGGAAGCATCTCCCAGACCCA +
Preference number: 6 (lower is better)
Translates to: PKPRAHTKAAAS*TEHPRKHLPDP
Trigger: TGGGTCTGGGAGATGCTTCCTGGGATGTTCTGTGCAGCTGGCAGCAGCCTTAGTGTGAGCTCTGGGCTTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS CCA 72 bp GGAAGGGGAACTGCTTGGGCTGCAGGAACTGTGTCTTaGGGATGTCCAGGCCATCCTCCCCATACAGGAACT +
Preference number: 6 (lower is better)
Translates to: GRGTAWAAGTVS*GCPGHPPHTGT
Trigger: AGTTCCTGTATGGGGAGGATGGCCTGGACATCCCCAAGACACAGTTCCTGCAGCCCAAGCAGTTCCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CCA 72 bp CAATGCCATACGTGTTGGCTATGGCGTGGATGTCGTTaGAGTAGAGGCGGCGCAGATCCAGGACCTGGAGAG +
Preference number: 6 (lower is better)
Translates to: QCHTCWLWRGCR*SRGGADPGPGE
Trigger: CTCTCCAGGTCCTGGATCTGCGCCGCCTCTACTCCAACGACATCCACGCCATAGCCAACACGTATGGCATTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471427.1
CDS CAA 72 bp TTGGTGTTGAGCACGGGCACGCTCATCATGGGTGTCTaGATGTTGGCGCTGGCCACCATGAGAATCTCCCGC +
Preference number: 6 (lower is better)
Translates to: LVLSTGTLIMGV*MLALATMRISR
Trigger: GCGGGAGATTCTCATGGTGGCCAGCGCCAACATCAAGACACCCATGATGAGCGTGCCCGTGCTCAACACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000462078.1
CDS CAA 72 bp TTGAGCACGGGCACGCTCATCATGGGTGTCTTGATGTaGGCGCTGGCCACCATGAGAATCTCCCGCAACCTG +
Preference number: 6 (lower is better)
Translates to: LSTGTLIMGVLM*ALATMRISRNL
Trigger: CAGGTTGCGGGAGATTCTCATGGTGGCCAGCGCCAACATCAAGACACCCATGATGAGCGTGCCCGTGCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462078.1
CDS CAA 90 bp TACATCCCGAAGGAAATGCCCTGCAGCCGCCGCCAGGGCATGTTCTaGGAGATCAACATCCTCCAGGTCCGTTTTGAATTCCGACACCCC +
Preference number: 6 (lower is better)
Translates to: YIPKEMPCSRRQGMF*EINILQVRFEFRHP
Trigger: GGGGTGTCGGAATTCAAAACGGACCTGGAGGATGTTGATCTCCAAGAACATGCCCTGGCGGCGGCTGCAGGGCATTTCCTTCGGGATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263857.11
ENST00000409024.3
ENST00000409681.1
ENST00000424089.5
ENST00000486964.5
ENST00000683266.1
ENST00000684026.1
ENST00000684177.1
CDS CAA 90 bp TGGCCCAGCAGGCACGAGATCTGCATCGTGTTCACAGTTGAACCTTaGGCTCCCGACTGCACCATCATCTGCAGGCTGTTCTCTGGGAAC +
Preference number: 6 (lower is better)
Translates to: WPSRHEICIVFTVEP*APDCTIICRLFSGN
Trigger: GTTCCCAGAGAACAGCCTGCAGATGATGGTGCAGTCGGGAGCCAAAGGTTCAACTGTGAACACGATGCAGATCTCGTGCCTGCTGGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CAA 90 bp TTCTTGGTGTTGAGCACGGGCACGCTCATCATGGGTGTCTTGATGTaGGCGCTGGCCACCATGAGAATCTCCCGCAACCTTGGAATGCCC +
Preference number: 6 (lower is better)
Translates to: FLVLSTGTLIMGVLM*ALATMRISRNLGMP
Trigger: GGGCATTCCAAGGTTGCGGGAGATTCTCATGGTGGCCAGCGCCAACATCAAGACACCCATGATGAGCGTGCCCGTGCTCAACACCAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CAA 90 bp AGGGCTTTCTTGGTGTTGAGCACGGGCACGCTCATCATGGGTGTCTaGATGTTGGCGCTGGCCACCATGAGAATCTCCCGCAACCTTGGA +
Preference number: 6 (lower is better)
Translates to: RAFLVLSTGTLIMGV*MLALATMRISRNLG
Trigger: TCCAAGGTTGCGGGAGATTCTCATGGTGGCCAGCGCCAACATCAAGACACCCATGATGAGCGTGCCCGTGCTCAACACCAAGAAAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CAA 90 bp AGGGCTTTCTTGGTGTTGAGCACGGGCACGCTCATCATGGGTGTCTaGATGTTGGCGCTGGCCACCATGAGAATCTCCCGCAACCTGAAG +
Preference number: 6 (lower is better)
Translates to: RAFLVLSTGTLIMGV*MLALATMRISRNLK
Trigger: CTTCAGGTTGCGGGAGATTCTCATGGTGGCCAGCGCCAACATCAAGACACCCATGATGAGCGTGCCCGTGCTCAACACCAAGAAAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462078.1
CDS TCA 72 bp CAACCCCGAGTAGTCATGCTTGCCCCTGAAACCATGTaGTCCTGGATCAGTCCCGCCAATGGTTGGCCATCC +
Preference number: 6 (lower is better)
Translates to: QPRVVMLAPETM*SWISPANGWPS
Trigger: GGATGGCCAACCATTGGCGGGACTGATCCAGGATCACATGGTTTCAGGGGCAAGCATGACTACTCGGGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000483538.1
ENST00000683266.1
CDS TCA 72 bp AAGGAGAAAGGAGCTTCACGCGCCCCACTTTGTCCGTaGGTCCTCGGTACACCAGCTCCATATAGTGCTCCC +
Preference number: 6 (lower is better)
Translates to: KEKGASRAPLCP*VLGTPAPYSAP
Trigger: GGGAGCACTATATGGAGCTGGTGTACCGAGGACTCACGGACAAAGTGGGGCGCGTGAAGCTCCTTTCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000483538.1
ENST00000683266.1
CDS TCA 72 bp GCCCAGCAGGCACGAGATCTGCATCGTGTTCACAGTTaGACCTTTGGCTCCCGACTGCACCATCATCTGCAG +
Preference number: 6 (lower is better)
Translates to: AQQARDLHRVHS*TFGSRLHHHLQ
Trigger: CTGCAGATGATGGTGCAGTCGGGAGCCAAAGGTTCAACTGTGAACACGATGCAGATCTCGTGCCTGCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS TCA 72 bp GAATGGAAATGGGCACGAGGGTGCCATTCTGCACTGTaGACGGGAATAAGCACTGGCTGTGGAGGAGAGGGG +
Preference number: 6 (lower is better)
Translates to: EWKWARGCHSAL*TGISTGCGGEG
Trigger: CCCCTCTCCTCCACAGCCAGTGCTTATTCCCGTTCACAGTGCAGAATGGCACCCTCGTGCCCATTTCCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683266.1
CDS GCA 72 bp AGCTCTTCAGCCGAATACATCCCGAAGGAAATGCCCTaGAGCCGCCGCCAGGGCATGTTCTTGGAGATCAAC +
Preference number: 6 (lower is better)
Translates to: SSSAEYIPKEMP*SRRQGMFLEIN
Trigger: GTTGATCTCCAAGAACATGCCCTGGCGGCGGCTGCAGGGCATTTCCTTCGGGATGTATTCGGCTGAAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263857.11
ENST00000409024.3
ENST00000409681.1
ENST00000424089.5
ENST00000486964.5
ENST00000683266.1
ENST00000684026.1
ENST00000684177.1
CDS GCA 72 bp ACACTGCCGTCACTGTCACGGACCGTGAGATCATACTaGACGACCAGCCCCTCTAGGTGCTTGATGATGCAC +
Preference number: 6 (lower is better)
Translates to: TLPSLSRTVRSY*TTSPSRCLMMH
Trigger: GTGCATCATCAAGCACCTAGAGGGGCTGGTCGTGCAGTATGATCTCACGGTCCGTGACAGTGACGGCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS GCA 72 bp TTTCGAGCACCTTCCCTGTGGGGATTTCGTTCCTCCTaGATGTCTTCATCGTCGTTCTCCTCGCCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: FRAPSLWGFRSS*MSSSSFSSPSL
Trigger: GAGGGAGGGCGAGGAGAACGACGATGAAGACATGCAGGAGGAACGAAATCCCCACAGGGAAGGTGCTCGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000492034.1
ENST00000496892.5
CDS CCA 72 bp CAATGCCATACGTGTTGGCTATGGCGTGGATGTCGTTaGAGTAGAGGCGGCGCAGATCCAGGACCTCTGCAT +
Preference number: 6 (lower is better)
Translates to: QCHTCWLWRGCR*SRGGADPGPLH
Trigger: ATGCAGAGGTCCTGGATCTGCGCCGCCTCTACTCCAACGACATCCACGCCATAGCCAACACGTATGGCATTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CCA 72 bp AGAACCAGGTATTCCCAGGGTTTAGGACACATCTGCTaGCCTCACATGGAGCTCCTCTCCAGACCCAGCCTG +
Preference number: 6 (lower is better)
Translates to: RTRYSQGLGHIC*PHMELLSRPSL
Trigger: CAGGCTGGGTCTGGAGAGGAGCTCCATGTGAGGCCAGCAGATGTGTCCTAAACCCTGGGAATACCTGGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS CAA 72 bp AATCTGCAGGGCCCAAAGCTAAATCGTACAGGCCGTTaGCCGATGGGTTCCCCAGGCTGTCCAGGTATCGAG +
Preference number: 6 (lower is better)
Translates to: NLQGPKLNRTGR*PMGSPGCPGIE
Trigger: CTCGATACCTGGACAGCCTGGGGAACCCATCGGCAAACGGCCTGTACGATTTAGCTTTGGGCCCTGCAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000684026.1
ENST00000684177.1
ENST00000684556.1
CDS CAA 72 bp TTGAGCACGGGCACGCTCATCATGGGTGTCTTGATGTaGGCGCTGGCCACCATGAGAATCTCCCGCAACCTT +
Preference number: 6 (lower is better)
Translates to: LSTGTLIMGVLM*ALATMRISRNL
Trigger: AAGGTTGCGGGAGATTCTCATGGTGGCCAGCGCCAACATCAAGACACCCATGATGAGCGTGCCCGTGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CAA 72 bp CCCTGGAGTTGGGCAACCAGGCACCTTGTGTGGGGCTaGTTAACAATGTACGTTCCTGAGTCCTTCCCCCAG +
Preference number: 6 (lower is better)
Translates to: PWSWATRHLVWG*LTMYVPESFPQ
Trigger: CTGGGGGAAGGACTCAGGAACGTACATTGTTAACAAGCCCCACACAAGGTGCCTGGTTGCCCAACTCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462078.1
CDS CAA 90 bp CCAGAACAGTTGCTGAAGTCCTGCACGCAGGTGGAGCACACCTCTTaGGAATCTGCAGGGCCCAAAGCTAAATCGTACAGGCCGTTTGCC +
Preference number: 6 (lower is better)
Translates to: PEQLLKSCTQVEHTS*ESAGPKAKSYRPFA
Trigger: GGCAAACGGCCTGTACGATTTAGCTTTGGGCCCTGCAGATTCCAAAGAGGTGTGCTCCACCTGCGTGCAGGACTTCAGCAACTGTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000684026.1
ENST00000684177.1
ENST00000684556.1
CDS CAA 90 bp GACCATGGAGGCTCCTGGGTGCACATTAGGGCCGTTGATGACCGCTaGCCTAAGTTCCTGAACATTCCATGGGGTAACTGGCTGTGGGTA +
Preference number: 6 (lower is better)
Translates to: DHGGSWVHIRAVDDR*PKFLNIPWGNWLWV
Trigger: TACCCACAGCCAGTTACCCCATGGAATGTTCAGGAACTTAGGCAAGCGGTCATCAACGGCCCTAATGTGCACCCAGGAGCCTCCATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000683266.1
ENST00000684556.1
CDS TCA 72 bp AAATGGAGATCCTACCAGGCCTTGGAATGCCCAGGGTaGCGTTCATCTCGCCTCTGCCTGCAAAGTGGAAGG +
Preference number: 6 (lower is better)
Translates to: KWRSYQALECPG*RSSRLCLQSGR
Trigger: CCTTCCACTTTGCAGGCAGAGGCGAGATGAACGTCACCCTGGGCATTCCAAGGCCTGGTAGGATCTCCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462078.1
CDS TCA 72 bp GCACCTTGTGTGGGGCTTGTTAACAATGTACGTTCCTaGGTCCTTCCCCCAGCAGTGTGCAGTCTCACAGGC +
Preference number: 6 (lower is better)
Translates to: APCVGLVNNVRS*VLPPAVCSLTG
Trigger: GCCTGTGAGACTGCACACTGCTGGGGGAAGGACTCAGGAACGTACATTGTTAACAAGCCCCACACAAGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462078.1
CDS GCA 72 bp TTATACACTGTGAGTGGGAGCTCAATGTGGCCCAGGTaGCCAGAACAGTTGCTGAAGTCCTGCACGCAGGTG +
Preference number: 6 (lower is better)
Translates to: LYTVSGSSMWPR*PEQLLKSCTQV
Trigger: CACCTGCGTGCAGGACTTCAGCAACTGTTCTGGGCACCTGGGCCACATTGAGCTCCCACTCACAGTGTATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000683470.1
ENST00000684026.1
ENST00000684177.1
ENST00000684556.1
CDS GCA 72 bp GTCCTCGGGTCTCAGGCACTTCTCCTGCTGGTAATATaGATGTGGCAGGAACTGAAACCGCAGCTGGTACAC +
Preference number: 6 (lower is better)
Translates to: VLGSQALLLLVI*MWQELKPQLVH
Trigger: GTGTACCAGCTGCGGTTTCAGTTCCTGCCACATGCATATTACCAGCAGGAGAAGTGCCTGAGACCCGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000492034.1
CDS GCA 72 bp ATCACCTGCTCCCCAGGGTTACTGATCTGTGTCACTTaGAGCCCCTTCAGAGAGCAGAGACCACATGGTCTG +
Preference number: 6 (lower is better)
Translates to: ITCSPGLLICVT*SPFREQRPHGL
Trigger: CAGACCATGTGGTCTCTGCTCTCTGAAGGGGCTGCAAGTGACACAGATCAGTAACCCTGGGGAGCAGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS CCA 72 bp AGGAGAGGGTTATACACTGTGAGTGGGAGCTCAATGTaGCCCAGGTGCCCAGAACAGTTGCTGAAGTCCTGC +
Preference number: 6 (lower is better)
Translates to: RRGLYTVSGSSM*PRCPEQLLKSC
Trigger: GCAGGACTTCAGCAACTGTTCTGGGCACCTGGGCCACATTGAGCTCCCACTCACAGTGTATAACCCTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000683470.1
ENST00000684026.1
ENST00000684177.1
ENST00000684556.1
CDS CAA 72 bp GGCTCCTGGGTGCACATTAGGGCCGTTGATGACCGCTaGCCTAAGTTCCTGAACATTCCATGGGGTAACTGG +
Preference number: 6 (lower is better)
Translates to: GSWVHIRAVDDR*PKFLNIPWGNW
Trigger: CCAGTTACCCCATGGAATGTTCAGGAACTTAGGCAAGCGGTCATCAACGGCCCTAATGTGCACCCAGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000683266.1
ENST00000684556.1
CDS CAA 72 bp CATCACCTGCTCCCCAGGGTTACTGATCTGTGTCACTaGCAGCCCCTTCAGAGAGCAGAGACCACATGGTCT +
Preference number: 6 (lower is better)
Translates to: HHLLPRVTDLCH*QPLQRAETTWS
Trigger: AGACCATGTGGTCTCTGCTCTCTGAAGGGGCTGCAAGTGACACAGATCAGTAACCCTGGGGAGCAGGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS CAA 90 bp TTTCCTCCACATCACCTGCTCCCCAGGGTTACTGATCTGTGTCACTaGCAGCCCCTTCAGAGAGCAGAGACCACATGGTCTGGTCTGTGT +
Preference number: 6 (lower is better)
Translates to: FPPHHLLPRVTDLCH*QPLQRAETTWSGLC
Trigger: ACACAGACCAGACCATGTGGTCTCTGCTCTCTGAAGGGGCTGCAAGTGACACAGATCAGTAACCCTGGGGAGCAGGTGATGTGGAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS TCA 72 bp TCACTTTCCTCCACATCACCTGCTCCCCAGGGTTACTaGTCTGTGTCACTTGCAGCCCCTTCAGAGAGCAGA +
Preference number: 6 (lower is better)
Translates to: SLSSTSPAPQGY*SVSLAAPSESR
Trigger: TCTGCTCTCTGAAGGGGCTGCAAGTGACACAGATCAGTAACCCTGGGGAGCAGGTGATGTGGAGGAAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS GCA 72 bp ACAGTTGAACCTTTGGCTCCCGACTGCACCATCATCTaGAGGCTGTTCTCTGGGAACTGTCTGTGTAGGCCA +
Preference number: 6 (lower is better)
Translates to: TVEPLAPDCTII*RLFSGNCLCRP
Trigger: TGGCCTACACAGACAGTTCCCAGAGAACAGCCTGCAGATGATGGTGCAGTCGGGAGCCAAAGGTTCAACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CCA 72 bp GCCTGCAAGTTCACCGTCTGGCCATTAGTAAACATCTaGTCTCCTAGGCGACTGACTGGGCGATACCTTGAG +
Preference number: 6 (lower is better)
Translates to: ACKFTVWPLVNI*SPRRLTGRYLE
Trigger: CTCAAGGTATCGCCCAGTCAGTCGCCTAGGAGACCAGATGTTTACTAATGGCCAGACGGTGAACTTGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000684177.1
ENST00000684556.1
CDS CCA 72 bp GGCACGAGATCTGCATCGTGTTCACAGTTGAACCTTTaGCTCCCGACTGCACCATCATCTGCAGGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: GTRSASCSQLNL*LPTAPSSAGCS
Trigger: AGAACAGCCTGCAGATGATGGTGCAGTCGGGAGCCAAAGGTTCAACTGTGAACACGATGCAGATCTCGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CCA 72 bp ATGCAAAGTAGATGTCAGGACGCCAGACAGACAGACTaGGGTCAGGACAAGCGGCCGCCTTCTTCTGGTATT +
Preference number: 6 (lower is better)
Translates to: MQSRCQDARQTD*GQDKRPPSSGI
Trigger: AATACCAGAAGAAGGCGGCCGCTTGTCCTGACCCCAGTCTGTCTGTCTGGCGTCCTGACATCTACTTTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CCA 72 bp GGGTCTCAGGCACTTCTCCTGCTGGTAATATGCATGTaGCAGGAACTGAAACCGCAGCTGGTACACCTGGAA +
Preference number: 6 (lower is better)
Translates to: GSQALLLLVICM*QELKPQLVHLE
Trigger: TTCCAGGTGTACCAGCTGCGGTTTCAGTTCCTGCCACATGCATATTACCAGCAGGAGAAGTGCCTGAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000492034.1
CDS CCA 72 bp TCTCACAGGCATCCCCAGGAACGTGGATGCAGGAGTTaGCAGAGGAATAAATGGAGATCCTACCAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: SHRHPQERGCRS*QRNKWRSYQAL
Trigger: CAAGGCCTGGTAGGATCTCCATTTATTCCTCTGCCAACTCCTGCATCCACGTTCCTGGGGATGCCTGTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462078.1
CDS CCA 72 bp TGGCCACCAATCACCAGAATCCGAACAGGAGCCGGATaGGTCCCTGACCAAAGCTGCCCTTACTCACAATTT +
Preference number: 6 (lower is better)
Translates to: WPPITRIRTGAG*VPDQSCPYSQF
Trigger: AAATTGTGAGTAAGGGCAGCTTTGGTCAGGGACCCATCCGGCTCCTGTTCGGATTCTGGTGATTGGTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684556.1
CDS CAA 72 bp AAGGAAATGCCCTGCAGCCGCCGCCAGGGCATGTTCTaGGAGATCAACATCCTCCAGGTCCGTTTTGAATTC +
Preference number: 6 (lower is better)
Translates to: KEMPCSRRQGMF*EINILQVRFEF
Trigger: GAATTCAAAACGGACCTGGAGGATGTTGATCTCCAAGAACATGCCCTGGCGGCGGCTGCAGGGCATTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263857.11
ENST00000409024.3
ENST00000409681.1
ENST00000424089.5
ENST00000486964.5
ENST00000683266.1
ENST00000684026.1
ENST00000684177.1
CDS CAA 72 bp TTGCTGAAGTCCTGCACGCAGGTGGAGCACACCTCTTaGGAATCTGCAGGGCCCAAAGCTAAATCGTACAGG +
Preference number: 6 (lower is better)
Translates to: LLKSCTQVEHTS*ESAGPKAKSYR
Trigger: CCTGTACGATTTAGCTTTGGGCCCTGCAGATTCCAAAGAGGTGTGCTCCACCTGCGTGCAGGACTTCAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000684026.1
ENST00000684177.1
ENST00000684556.1
CDS CAA 90 bp CGGCTGGAGTCTGAGAACCCGGACTGTCTACCCAAGGCTGCCTATTaGCATCCAGAGAGTACTTTAGAGCTGGGAAGGATCTTGATGACC +
Preference number: 6 (lower is better)
Translates to: RLESENPDCLPKAAY*HPESTLELGRILMT
Trigger: GGTCATCAAGATCCTTCCCAGCTCTAAAGTACTCTCTGGATGCAAATAGGCAGCCTTGGGTAGACAGTCCGGGTTCTCAGACTCCAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS TCA 72 bp TTCGTTGGTGTTGATGTACATGTCTGGGCAGATGACTaGGCGCGCAGCGTAGTCCACTCGCTTTCCCATCAT +
Preference number: 6 (lower is better)
Translates to: FVGVDVHVWADD*ARSVVHSLSHH
Trigger: ATGATGGGAAAGCGAGTGGACTACGCTGCGCGCTCAGTCATCTGCCCAGACATGTACATCAACACCAACGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000683266.1
ENST00000684556.1
CDS TCA 72 bp AATCACCAGAATCCGAACAGGAGCCGGATGGGTCCCTaGCCAAAGCTGCCCTTACTCACAATTTTTGTCCCC +
Preference number: 6 (lower is better)
Translates to: NHQNPNRSRMGP*PKLPLLTIFVP
Trigger: GGGGACAAAAATTGTGAGTAAGGGCAGCTTTGGTCAGGGACCCATCCGGCTCCTGTTCGGATTCTGGTGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684556.1
CDS GCA 72 bp TGCATCGTGTTCACAGTTGAACCTTTGGCTCCCGACTaGACCATCATCTGCAGGCTGTTCTCTGGGAACTGT +
Preference number: 6 (lower is better)
Translates to: CIVFTVEPLAPD*TIICRLFSGNC
Trigger: ACAGTTCCCAGAGAACAGCCTGCAGATGATGGTGCAGTCGGGAGCCAAAGGTTCAACTGTGAACACGATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS GCA 72 bp TTCTGCAACACCTCCCCCAAGCACACCCTGGTGAGTTaGTTCTTCAGGCTTTTCACTCTCTTCAGGGCTTTC +
Preference number: 6 (lower is better)
Translates to: FCNTSPKHTLVS*FFRLFTLFRAF
Trigger: GAAAGCCCTGAAGAGAGTGAAAAGCCTGAAGAAGCAACTCACCAGGGTGTGCTTGGGGGAGGTGTTGCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS GCA 72 bp AGTGTGCAGTCTCACAGGCATCCCCAGGAACGTGGATaGAGGAGTTGGCAGAGGAATAAATGGAGATCCTAC +
Preference number: 6 (lower is better)
Translates to: SVQSHRHPQERG*RSWQRNKWRSY
Trigger: GTAGGATCTCCATTTATTCCTCTGCCAACTCCTGCATCCACGTTCCTGGGGATGCCTGTGAGACTGCACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462078.1
CDS GCA 72 bp CCCTGTCTTGTCTTGCCCACATCCTCACTATGTTCTTaGTTGGGAGCCAACTGCTTCCCAAAGCACATGACC +
Preference number: 6 (lower is better)
Translates to: PCLVLPTSSLCS*LGANCFPKHMT
Trigger: GGTCATGTGCTTTGGGAAGCAGTTGGCTCCCAAGCAAGAACATAGTGAGGATGTGGGCAAGACAAGACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483538.1
CDS CCA 72 bp CAGCTTATCGAAGAGGAGAGGGTTATACACTGTGAGTaGGAGCTCAATGTGGCCCAGGTGCCCAGAACAGTT +
Preference number: 6 (lower is better)
Translates to: QLIEEERVIHCE*ELNVAQVPRTV
Trigger: AACTGTTCTGGGCACCTGGGCCACATTGAGCTCCCACTCACAGTGTATAACCCTCTCCTCTTCGATAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000683470.1
ENST00000684026.1
ENST00000684177.1
ENST00000684556.1
CDS CCA 72 bp CGTCTCCATCAAAGTCGGCATTATAGGCCTTGCAGTTaGCATAGTGGAGCCGCAGCACTTTCTCTTCAGGCA +
Preference number: 6 (lower is better)
Translates to: RLHQSRHYRPCS*HSGAAALSLQA
Trigger: TGCCTGAAGAGAAAGTGCTGCGGCTCCACTATGCCAACTGCAAGGCCTATAATGCCGACTTTGATGGAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000683266.1
CDS CAA 72 bp TGCTTCTTCAGGCTTTTCACTCTCTTCAGGGCTTTCTaGGTGTTGAGCACGGGCACGCTCATCATGGGTGTC +
Preference number: 6 (lower is better)
Translates to: CFFRLFTLFRAF*VLSTGTLIMGV
Trigger: GACACCCATGATGAGCGTGCCCGTGCTCAACACCAAGAAAGCCCTGAAGAGAGTGAAAAGCCTGAAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000462078.1
CDS CAA 90 bp AGTTGCTTCTTCAGGCTTTTCACTCTCTTCAGGGCTTTCTTGGTGTaGAGCACGGGCACGCTCATCATGGGTGTCTTGATGTTGGCGCTG +
Preference number: 6 (lower is better)
Translates to: SCFFRLFTLFRAFLV*STGTLIMGVLMLAL
Trigger: CAGCGCCAACATCAAGACACCCATGATGAGCGTGCCCGTGCTCAACACCAAGAAAGCCCTGAAGAGAGTGAAAAGCCTGAAGAAGCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000462078.1
CDS CAA 90 bp AGGCCCTCTGTGCAGGTGGGTGAGGAAAATCCAGGCAGTCACCTATaGACTCCGGTAGTCACTTGTGGGTTACATCCAAGTCGAATCCAT +
Preference number: 6 (lower is better)
Translates to: RPSVQVGEENPGSHL*TPVVTCGLHPSRIH
Trigger: ATGGATTCGACTTGGATGTAACCCACAAGTGACTACCGGAGTCAATAGGTGACTGCCTGGATTTTCCTCACCCACCTGCACAGAGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684556.1
CDS CAA 90 bp CTGGTGAGTTGCTTCTTCAGGCTTTTCACTCTCTTCAGGGCTTTCTaGGTGTTGAGCACGGGCACGCTCATCATGGGTGTCTTGATGTTG +
Preference number: 6 (lower is better)
Translates to: LVSCFFRLFTLFRAF*VLSTGTLIMGVLML
Trigger: CAACATCAAGACACCCATGATGAGCGTGCCCGTGCTCAACACCAAGAAAGCCCTGAAGAGAGTGAAAAGCCTGAAGAAGCAACTCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000462078.1
CDS GCA 72 bp CGGTCATGTGCGCCCTGGGACCCCAGGAGGTTGTTCTaGACAATTTCAGTTGTGTATTGTTCTAATTCCTCC +
Preference number: 6 (lower is better)
Translates to: RSCAPWDPRRLF*TISVVYCSNSS
Trigger: GGAGGAATTAGAACAATACACAACTGAAATTGTGCAGAACAACCTCCTGGGGTCCCAGGGCGCACATGACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424089.5
CDS GCA 72 bp AAACAGCATGGGAGAAAGACAGTGTTAACTCACATGTaGGCCCTGGGACCCCAGGAGGTTGTTCTGCACAAT +
Preference number: 6 (lower is better)
Translates to: KQHGRKTVLTHM*ALGPQEVVLHN
Trigger: ATTGTGCAGAACAACCTCCTGGGGTCCCAGGGCGCACATGTGAGTTAACACTGTCTTTCTCCCATGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683470.1
CDS CCA 72 bp GTTGATGACCGCTTGCCTAAGTTCCTGAACATTCCATaGGGTAACTGGCTGTGGGTAGGTCAGTTTTGTGGC +
Preference number: 6 (lower is better)
Translates to: VDDRLPKFLNIP*GNWLWVGQFCG
Trigger: GCCACAAAACTGACCTACCCACAGCCAGTTACCCCATGGAATGTTCAGGAACTTAGGCAAGCGGTCATCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000683266.1
ENST00000684556.1
CDS CAA 72 bp GCATGTTCTTGGAGATCAACATCCTCCAGGTCCGTTTaGAATTCCGACACCCCAAGAGACGTTCCACTCACC +
Preference number: 6 (lower is better)
Translates to: ACSWRSTSSRSV*NSDTPRDVPLT
Trigger: GGTGAGTGGAACGTCTCTTGGGGTGTCGGAATTCAAAACGGACCTGGAGGATGTTGATCTCCAAGAACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263857.11
ENST00000409024.3
ENST00000409681.1
ENST00000424089.5
ENST00000486964.5
ENST00000683266.1
ENST00000684026.1
ENST00000684177.1
CDS CAA 72 bp TTTCTGCAACACCTCCCCCAAGCACACCCTGGTGAGTaGCTTCTTCAGGCTTTTCACTCTCTTCAGGGCTTT +
Preference number: 6 (lower is better)
Translates to: FLQHLPQAHPGE*LLQAFHSLQGF
Trigger: AAAGCCCTGAAGAGAGTGAAAAGCCTGAAGAAGCAACTCACCAGGGTGTGCTTGGGGGAGGTGTTGCAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CAA 72 bp TGTCTTGTCTTGCCCACATCCTCACTATGTTCTTGCTaGGGAGCCAACTGCTTCCCAAAGCACATGACCAGG +
Preference number: 6 (lower is better)
Translates to: CLVLPTSSLCSC*GANCFPKHMTR
Trigger: CCTGGTCATGTGCTTTGGGAAGCAGTTGGCTCCCAAGCAAGAACATAGTGAGGATGTGGGCAAGACAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483538.1
CDS CAA 72 bp TCCCTGTCTTGTCTTGCCCACATCCTCACTATGTTCTaGCTTGGGAGCCAACTGCTTCCCAAAGCACATGAC +
Preference number: 6 (lower is better)
Translates to: SLSCLAHILTMF*LGSQLLPKAHD
Trigger: GTCATGTGCTTTGGGAAGCAGTTGGCTCCCAAGCAAGAACATAGTGAGGATGTGGGCAAGACAAGACAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483538.1
CDS CAA 72 bp GTGCAGGTGGGTGAGGAAAATCCAGGCAGTCACCTATaGACTCCGGTAGTCACTTGTGGGTTACATCCAAGT +
Preference number: 6 (lower is better)
Translates to: VQVGEENPGSHL*TPVVTCGLHPS
Trigger: ACTTGGATGTAACCCACAAGTGACTACCGGAGTCAATAGGTGACTGCCTGGATTTTCCTCACCCACCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684556.1
CDS CAA 90 bp ACTGGAAGCTGGTTTCAAATGTCATCTGCTGTAGCGGGGAAGAGTTaGACCGGATCCCAAAGCGATTCAGTGGCTTGTAAACACCCTCGA +
Preference number: 6 (lower is better)
Translates to: TGSWFQMSSAVAGKS*TGSQSDSVACKHPR
Trigger: TCGAGGGTGTTTACAAGCCACTGAATCGCTTTGGGATCCGGTCAAACTCTTCCCCGCTACAGCAGATGACATTTGAAACCAGCTTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CAA 90 bp ACGGCACCATGGGCCAAAGATACTACCAGGGAGCTCATGTCAAAGTaGATCTTCATCAGAGGGAGCTTCACTGTCACCTCTTCATCTTGC +
Preference number: 6 (lower is better)
Translates to: TAPWAKDTTRELMSK*IFIRGSFTVTSSSC
Trigger: GCAAGATGAAGAGGTGACAGTGAAGCTCCCTCTGATGAAGATCAACTTTGACATGAGCTCCCTGGTAGTATCTTTGGCCCATGGTGCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409681.1
CDS TCA 72 bp AATTCCGACACCCCAAGAGACGTTCCACTCACCACCTaGCTATTCTTAATTCAACCTCAAGCCCGGAGTCAC +
Preference number: 6 (lower is better)
Translates to: NSDTPRDVPLTT*LFLIQPQARSH
Trigger: GTGACTCCGGGCTTGAGGTTGAATTAAGAATAGTCAGGTGGTGAGTGGAACGTCTCTTGGGGTGTCGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263857.11
ENST00000409024.3
ENST00000409681.1
ENST00000424089.5
ENST00000486964.5
ENST00000683266.1
ENST00000684026.1
ENST00000684177.1
CDS TCA 72 bp CATGTTCTTGGAGATCAACATCCTCCAGGTCCGTTTTaGATTCCGACACCCCAAGAGACGTTCCACTCACCA +
Preference number: 6 (lower is better)
Translates to: HVLGDQHPPGPF*IPTPQETFHSP
Trigger: TGGTGAGTGGAACGTCTCTTGGGGTGTCGGAATTCAAAACGGACCTGGAGGATGTTGATCTCCAAGAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000263857.11
ENST00000409024.3
ENST00000409681.1
ENST00000424089.5
ENST00000486964.5
ENST00000683266.1
ENST00000684026.1
ENST00000684177.1
CDS TCA 72 bp CGGATCGAGGAGTTTCCTTCACCCAGGCTTTCCCAGTaGTTTTCGCCTTTCCAGATAAGTTCAGTGGGATGT +
Preference number: 6 (lower is better)
Translates to: RIEEFPSPRLSQ*FSPFQISSVGC
Trigger: ACATCCCACTGAACTTATCTGGAAAGGCGAAAATCACTGGGAAAGCCTGGGTGAAGGAAACTCCTCGATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000483538.1
ENST00000683266.1
CDS GCA 72 bp ACATCCAAGTCGAATCCATTTCCCTCCAACAACTGCTaGCACTGTTGCCTAGTTAGGGGTCATCTGCTACTC +
Preference number: 6 (lower is better)
Translates to: TSKSNPFPSNNC*HCCLVRGHLLL
Trigger: GAGTAGCAGATGACCCCTAACTAGGCAACAGTGGCAGCAGTTGTTGGAGGGAAATGGATTCGACTTGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684556.1
CDS GCA 72 bp AAACAAGCAAAACCACAGAAAGCCCCAAGTGTAACCTaGACCATAAGTGTCCAAGAGACAGTGGCGCCACCT +
Preference number: 6 (lower is better)
Translates to: KQAKPQKAPSVT*TISVQETVAPP
Trigger: AGGTGGCGCCACTGTCTCTTGGACACTTATGGTGCAGGTTACACTTGGGGCTTTCTGTGGTTTTGCTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS CCA 72 bp ACTACATCCTTCATGACAGCCTGCAAGTTCACCGTCTaGCCATTAGTAAACATCTGGTCTCCTAGGCGACTG +
Preference number: 6 (lower is better)
Translates to: TTSFMTACKFTV*PLVNIWSPRRL
Trigger: CAGTCGCCTAGGAGACCAGATGTTTACTAATGGCCAGACGGTGAACTTGCAGGCTGTCATGAAGGATGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000684177.1
ENST00000684556.1
CDS CCA 72 bp CGCTTGCCTAAGTTCCTGAACATTCCATGGGGTAACTaGCTGTGGGTAGGTCAGTTTTGTGGCAAACACCAT +
Preference number: 6 (lower is better)
Translates to: RLPKFLNIPWGN*LWVGQFCGKHH
Trigger: ATGGTGTTTGCCACAAAACTGACCTACCCACAGCCAGTTACCCCATGGAATGTTCAGGAACTTAGGCAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000683266.1
ENST00000684556.1
CDS CCA 72 bp ATCCCAGCATGGTGGCTTGCTTCAGAAACTGGAAGCTaGTTTCAAATGTCATCTGCTGTAGCGGGGAAGAGT +
Preference number: 6 (lower is better)
Translates to: IPAWWLASETGS*FQMSSAVAGKS
Trigger: ACTCTTCCCCGCTACAGCAGATGACATTTGAAACCAGCTTCCAGTTTCTGAAGCAAGCCACCATGCTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CCA 72 bp TCCAGGCAGTCACCTATTGACTCCGGTAGTCACTTGTaGGTTACATCCAAGTCGAATCCATTTCCCTCCAAC +
Preference number: 6 (lower is better)
Translates to: SRQSPIDSGSHL*VTSKSNPFPSN
Trigger: GTTGGAGGGAAATGGATTCGACTTGGATGTAACCCACAAGTGACTACCGGAGTCAATAGGTGACTGCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684556.1
CDS CCA 72 bp TGGCCAGGCTGCCCGATTTTTAAGGGACATCAACCCTaGTCACTGGGTACAGTTATCCCATGGTCTTTTCTT +
Preference number: 6 (lower is better)
Translates to: WPGCPIFKGHQP*SLGTVIPWSFL
Trigger: AAGAAAAGACCATGGGATAACTGTACCCAGTGACCAGGGTTGATGTCCCTTAAAAATCGGGCAGCCTGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS CAA 72 bp AGTGGGTGTGGCCACTTCCTCTGGCAACTTCTGTTCTaGGGCCATCAATGCCAGAAGTTTTCGAATCAGAAC +
Preference number: 6 (lower is better)
Translates to: SGCGHFLWQLLF*GHQCQKFSNQN
Trigger: GTTCTGATTCGAAAACTTCTGGCATTGATGGCCCAAGAACAGAAGTTGCCAGAGGAAGTGGCCACACCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000684177.1
ENST00000684556.1
CDS CAA 72 bp GTGGCAAACACCATGGGAATTCCAATTTCGTTGGTGTaGATGTACATGTCTGGGCAGATGACTGAGCGCGCA +
Preference number: 6 (lower is better)
Translates to: VANTMGIPISLV*MYMSGQMTERA
Trigger: TGCGCGCTCAGTCATCTGCCCAGACATGTACATCAACACCAACGAAATTGGAATTCCCATGGTGTTTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000683266.1
ENST00000684556.1
CDS CAA 72 bp TGGGCCAAAGATACTACCAGGGAGCTCATGTCAAAGTaGATCTTCATCAGAGGGAGCTTCACTGTCACCTGG +
Preference number: 6 (lower is better)
Translates to: WAKDTTRELMSK*IFIRGSFTVTW
Trigger: CCAGGTGACAGTGAAGCTCCCTCTGATGAAGATCAACTTTGACATGAGCTCCCTGGTAGTATCTTTGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263857.11
CDS CAA 90 bp GCCTGGAAGCCACTTTCTATCAAGAGCCCTTCTTATATCCCTGTCTaGTCTTGCCCACATCCTCACTATGTTCTTGCTTGGGAGCCAACT +
Preference number: 6 (lower is better)
Translates to: AWKPLSIKSPSYIPV*SCPHPHYVLAWEPT
Trigger: AGTTGGCTCCCAAGCAAGAACATAGTGAGGATGTGGGCAAGACAAGACAGGGATATAAGAAGGGCTCTTGATAGAAAGTGGCTTCCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483538.1
CDS CAA 90 bp AGAGCCACAGAGCTGTCACCTGCTGATTTCATGCACTCAGCAACATaGTTAATCGATCATGTGCTCCTTCCAGTGGAACCTGATAGAGCC +
Preference number: 6 (lower is better)
Translates to: RATELSPADFMHSAT*LIDHVLLPVEPDRA
Trigger: GGCTCTATCAGGTTCCACTGGAAGGAGCACATGATCGATTAACAATGTTGCTGAGTGCATGAAATCAGCAGGTGACAGCTCTGTGGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684556.1
CDS CAA 90 bp GCTGCCTATTTGCATCCAGAGAGTACTTTAGAGCTGGGAAGGATCTaGATGACCTCAGCAAGCTTCCTGGGTGCCCAATTCACCTTTGTA +
Preference number: 6 (lower is better)
Translates to: AAYLHPESTLELGRI*MTSASFLGAQFTFV
Trigger: TACAAAGGTGAATTGGGCACCCAGGAAGCTTGCTGAGGTCATCAAGATCCTTCCCAGCTCTAAAGTACTCTCTGGATGCAAATAGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS GCA 72 bp TCTTCCATACAGAAGGACTCCTGGACGTCAATTTTCTaGAACACCTGGAACCAGACGGACAGAGAGAACTTG +
Preference number: 6 (lower is better)
Translates to: SSIQKDSWTSIF*NTWNQTDRENL
Trigger: CAAGTTCTCTCTGTCCGTCTGGTTCCAGGTGTTGCAGAAAATTGACGTCCAGGAGTCCTTCTGTATGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492034.1
CDS GCA 72 bp GTGAGGTTGCAGGTCTCACAAGAGACAGAGCTCAGATaGAAACTCAGGTCTACTTTGGGAAGCCAGAAGTAT +
Preference number: 6 (lower is better)
Translates to: VRLQVSQETELR*KLRSTLGSQKY
Trigger: ATACTTCTGGCTTCCCAAAGTAGACCTGAGTTTGCATCTGAGCTCTGTCTCTTGTGAGACCTGCAACCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683470.1
CDS CCA 72 bp CAGAAGGACTCCTGGACGTCAATTTTCTGCAACACCTaGAACCAGACGGACAGAGAGAACTTGACTTGTTCA +
Preference number: 6 (lower is better)
Translates to: QKDSWTSIFCNT*NQTDRENLTCS
Trigger: TGAACAAGTCAAGTTCTCTCTGTCCGTCTGGTTCCAGGTGTTGCAGAAAATTGACGTCCAGGAGTCCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492034.1
CDS CCA 72 bp GGACATCAACCCTGGTCACTGGGTACAGTTATCCCATaGTCTTTTCTTGGAAACTGCACTAAGGCATGCACA +
Preference number: 6 (lower is better)
Translates to: GHQPWSLGTVIP*SFLGNCTKACT
Trigger: TGTGCATGCCTTAGTGCAGTTTCCAAGAAAAGACCATGGGATAACTGTACCCAGTGACCAGGGTTGATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS CAA 72 bp CCGCAGTGGGTGGATTCTTCAATGATACGTTGCCTCTaGACATCTGCCTTTGGCTTCACCAAAATGTCTTCC +
Preference number: 6 (lower is better)
Translates to: PQWVDSSMIRCL*TSAFGFTKMSS
Trigger: GGAAGACATTTTGGTGAAGCCAAAGGCAGATGTCAAGAGGCAACGTATCATTGAAGAATCCACCCACTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CAA 72 bp AACTTCAGATCAATCATGTTAAAATCCCTCTGGTCCTaGCCCAGATGGGCATCCTGCCATTTTCCTCGGACC +
Preference number: 6 (lower is better)
Translates to: NFRSIMLKSLWS*PRWASCHFPRT
Trigger: GGTCCGAGGAAAATGGCAGGATGCCCATCTGGGCAAGGACCAGAGGGATTTTAACATGATTGATCTGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CAA 72 bp TGGGCCAAAGATACTACCAGGGAGCTCATGTCAAAGTaGATCTTCATCAGAGGGAGCTTCACTGTCACCTCT +
Preference number: 6 (lower is better)
Translates to: WAKDTTRELMSK*IFIRGSFTVTS
Trigger: AGAGGTGACAGTGAAGCTCCCTCTGATGAAGATCAACTTTGACATGAGCTCCCTGGTAGTATCTTTGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409681.1
CDS CAA 72 bp AAATCCAGGCAGTCACCTATTGACTCCGGTAGTCACTaGTGGGTTACATCCAAGTCGAATCCATTTCCCTCC +
Preference number: 6 (lower is better)
Translates to: KSRQSPIDSGSH*WVTSKSNPFPS
Trigger: GGAGGGAAATGGATTCGACTTGGATGTAACCCACAAGTGACTACCGGAGTCAATAGGTGACTGCCTGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684556.1
CDS CAA 90 bp CTCATCTGTAGTGGGTGTGGCCACTTCCTCTGGCAACTTCTGTTCTaGGGCCATCAATGCCAGAAGTTTTCGAATCAGAACTACATCCTT +
Preference number: 6 (lower is better)
Translates to: LICSGCGHFLWQLLF*GHQCQKFSNQNYIL
Trigger: AAGGATGTAGTTCTGATTCGAAAACTTCTGGCATTGATGGCCCAAGAACAGAAGTTGCCAGAGGAAGTGGCCACACCCACTACAGATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000684177.1
ENST00000684556.1
CDS CAA 90 bp CTTCTTATATCCCTGTCTTGTCTTGCCCACATCCTCACTATGTTCTaGCTTGGGAGCCAACTGCTTCCCAAAGCACATGACCAGGGTTTA +
Preference number: 6 (lower is better)
Translates to: LLISLSCLAHILTMF*LGSQLLPKAHDQGL
Trigger: TAAACCCTGGTCATGTGCTTTGGGAAGCAGTTGGCTCCCAAGCAAGAACATAGTGAGGATGTGGGCAAGACAAGACAGGGATATAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483538.1
CDS CAA 90 bp GAAGCCACTTTCTATCAAGAGCCCTTCTTATATCCCTGTCTTGTCTaGCCCACATCCTCACTATGTTCTTGCTTGGGAGCCAACTGCTTC +
Preference number: 6 (lower is better)
Translates to: EATFYQEPFLYPCLV*PTSSLCSCLGANCF
Trigger: GAAGCAGTTGGCTCCCAAGCAAGAACATAGTGAGGATGTGGGCAAGACAAGACAGGGATATAAGAAGGGCTCTTGATAGAAAGTGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483538.1
CDS CAA 90 bp TCCTCCTTGAACTTCAGATCAATCATGTTAAAATCCCTCTGGTCCTaGCCCAGATGGGCATCCTGCCATTTTCCTCGGACCTCATCATAT +
Preference number: 6 (lower is better)
Translates to: SSLNFRSIMLKSLWS*PRWASCHFPRTSSY
Trigger: ATATGATGAGGTCCGAGGAAAATGGCAGGATGCCCATCTGGGCAAGGACCAGAGGGATTTTAACATGATTGATCTGAAGTTCAAGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS GCA 72 bp TTTACATGTGCGCCCTGGGACCCCAGGAGGTTGTTCTaGACAATTTCAGTTGTGTATTGTTCTAATTCCTCC +
Preference number: 6 (lower is better)
Translates to: FTCAPWDPRRLF*TISVVYCSNSS
Trigger: GGAGGAATTAGAACAATACACAACTGAAATTGTGCAGAACAACCTCCTGGGGTCCCAGGGCGCACATGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263857.11
ENST00000409024.3
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000684026.1
ENST00000684177.1
ENST00000684556.1
CDS GCA 72 bp TCTATCAAGAGCCCTTCTTATATCCCTGTCTTGTCTTaGCCACATCCTCACTATGTTCTTGCTTGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: SIKSPSYIPVLS*PHPHYVLAWEP
Trigger: TGGCTCCCAAGCAAGAACATAGTGAGGATGTGGGCAAGACAAGACAGGGATATAAGAAGGGCTCTTGATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483538.1
CDS GCA 72 bp CCCACCTGCAGTTGTCATTTCATAACCAGGCTCAGCTaGGATAATTGTCAAGTTTTTGGTGCTGGGTATGAC +
Preference number: 6 (lower is better)
Translates to: PTCSCHFITRLS*DNCQVFGAGYD
Trigger: GTCATACCCAGCACCAAAAACTTGACAATTATCGCAGCTGAGCCTGGTTATGAAATGACAACTGCAGGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS GCA 72 bp TGTCCTATTCTGAGAGGAATTTCCACTCTGCAATACTaGCTTCCTGACCCCAATGCTGGAGACATTAACGTG +
Preference number: 6 (lower is better)
Translates to: CPILRGISTLQY*LPDPNAGDINV
Trigger: CACGTTAATGTCTCCAGCATTGGGGTCAGGAAGGCAGTATTGCAGAGTGGAAATTCCTCTCAGAATAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS CAA 72 bp TGGTTTCAAATGTCATCTGCTGTAGCGGGGAAGAGTTaGACCGGATCCCAAAGCGATTCAGTGGCTTGTAAA +
Preference number: 6 (lower is better)
Translates to: WFQMSSAVAGKS*TGSQSDSVACK
Trigger: TTTACAAGCCACTGAATCGCTTTGGGATCCGGTCAAACTCTTCCCCGCTACAGCAGATGACATTTGAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS TCA 72 bp AGTTCAGTGGGATGTGGTCCTCTGGGATTATATTTATaGGCAGCGTTGACACAACCTGTTTTCCTGTCCACA +
Preference number: 6 (lower is better)
Translates to: SSVGCGPLGLYL*AALTQPVFLST
Trigger: TGTGGACAGGAAAACAGGTTGTGTCAACGCTGCTCATAAATATAATCCCAGAGGACCACATCCCACTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000483538.1
ENST00000683266.1
CDS TCA 72 bp GGGGCTCAGGAAATGTTAGTTGAAACTGTCCTATTCTaGGAGGAATTTCCACTCTGCAATACTGCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: GAQEMLVETVLF*EEFPLCNTAFL
Trigger: CAGGAAGGCAGTATTGCAGAGTGGAAATTCCTCTCAGAATAGGACAGTTTCAACTAACATTTCCTGAGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS GCA 72 bp AATGGGTTTGGTGAAGGCATTGAAAGGCTACTTACCTaGCGGACATTTGCCCCACGAAAACTATCTTCTAGA +
Preference number: 6 (lower is better)
Translates to: NGFGEGIERLLT*RTFAPRKLSSR
Trigger: TCTAGAAGATAGTTTTCGTGGGGCAAATGTCCGGCAGGTAAGTAGCCTTTCAATGCCTTCACCAAACCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS CCA 72 bp TTCTTCAATGATACGTTGCCTCTTGACATCTGCCTTTaGCTTCACCAAAATGTCTTCCACGCCCAAGGTGAA +
Preference number: 6 (lower is better)
Translates to: FFNDTLPLDICL*LHQNVFHAQGE
Trigger: TTCACCTTGGGCGTGGAAGACATTTTGGTGAAGCCAAAGGCAGATGTCAAGAGGCAACGTATCATTGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CCA 72 bp CCTCAAAACAGCCTTCTATCTGCCACTCAGAAAAAGTaGCAGAGCCAAGTGACAATTGCAGGTTGTGCTTTT +
Preference number: 6 (lower is better)
Translates to: PQNSLLSATQKK*QSQVTIAGCAF
Trigger: AAAAGCACAACCTGCAATTGTCACTTGGCTCTGCCACTTTTTCTGAGTGGCAGATAGAAGGCTGTTTTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS CCA 72 bp GTGTCCTGGCATTGTGCTCATCACAAACATGGTCCTTaGCATAATGCTGAGCACCCAACAAATAAATGTGTG +
Preference number: 6 (lower is better)
Translates to: VSWHCAHHKHGP*HNAEHPTNKCV
Trigger: CACACATTTATTTGTTGGGTGCTCAGCATTATGCCAAGGACCATGTTTGTGATGAGCACAATGCCAGGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS CAA 72 bp AAAGATGACTTTAGAAGAATGGGTTTGGTGAAGGCATaGAAAGGCTACTTACCTGCCGGACATTTGCCCCAC +
Preference number: 6 (lower is better)
Translates to: KDDFRRMGLVKA*KGYLPAGHLPH
Trigger: GTGGGGCAAATGTCCGGCAGGTAAGTAGCCTTTCAATGCCTTCACCAAACCCATTCTTCTAAAGTCATCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS GCA 72 bp GTTAGAAATGGAAACGCCTCAAAACAGCCTTCTATCTaGCACTCAGAAAAAGTGGCAGAGCCAAGTGACAAT +
Preference number: 6 (lower is better)
Translates to: VRNGNASKQPSI*HSEKVAEPSDN
Trigger: ATTGTCACTTGGCTCTGCCACTTTTTCTGAGTGGCAGATAGAAGGCTGTTTTGAGGCGTTTCCATTTCTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS GCA 72 bp AATTGTCAAGTTTTTGGTGCTGGGTATGACCTCTCCTaGTCTATGACTCAATGTCAATGTGCCCTGAAGACT +
Preference number: 6 (lower is better)
Translates to: NCQVFGAGYDLS*SMTQCQCALKT
Trigger: AGTCTTCAGGGCACATTGACATTGAGTCATAGAGCAGGAGAGGTCATACCCAGCACCAAAAACTTGACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS CCA 72 bp GTGATTTTCGCCTTTCCAGATAAGTTCAGTGGGATGTaGTCCTCTGGGATTATATTTATGAGCAGCGTTGAC +
Preference number: 6 (lower is better)
Translates to: VIFAFPDKFSGM*SSGIIFMSSVD
Trigger: GTCAACGCTGCTCATAAATATAATCCCAGAGGACCACATCCCACTGAACTTATCTGGAAAGGCGAAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000483538.1
ENST00000683266.1
CDS CCA 72 bp AAGAGACAGAGCTCAGATGCAAACTCAGGTCTACTTTaGGAAGCCAGAAGTATATGCAAAGGACAACACAGA +
Preference number: 6 (lower is better)
Translates to: KRQSSDANSGLL*EARSICKGQHR
Trigger: TCTGTGTTGTCCTTTGCATATACTTCTGGCTTCCCAAAGTAGACCTGAGTTTGCATCTGAGCTCTGTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683470.1
CDS CAA 72 bp GGCACCACCAAGAAATCTAGAAAGAACACACTGGGATaGAATCTGGATTCCATACCATCATCATCCATTCCC +
Preference number: 6 (lower is better)
Translates to: GTTKKSRKNTLG*NLDSIPSSSIP
Trigger: GGGAATGGATGATGATGGTATGGAATCCAGATTCAATCCCAGTGTGTTCTTTCTAGATTTCTTGGTGGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000684177.1
ENST00000684556.1
CDS CAA 72 bp TCTTTCTTCTCCAGGATCTGCCTAATGCCTGGGTACTaGTCCATCATTAGTTTGTCCATCTCGCTATCAAAC +
Preference number: 6 (lower is better)
Translates to: SFFSRICLMPGY*SIISLSISLSN
Trigger: GTTTGATAGCGAGATGGACAAACTAATGATGGACAAGTACCCAGGCATTAGGCAGATCCTGGAGAAGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000683266.1
ENST00000684556.1
CDS CAA 72 bp AGTTTTGTGGCAAACACCATGGGAATTCCAATTTCGTaGGTGTTGATGTACATGTCTGGGCAGATGACTGAG +
Preference number: 6 (lower is better)
Translates to: SFVANTMGIPIS*VLMYMSGQMTE
Trigger: CTCAGTCATCTGCCCAGACATGTACATCAACACCAACGAAATTGGAATTCCCATGGTGTTTGCCACAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000683266.1
ENST00000684556.1
CDS CAA 72 bp ACCTGCCTAATGCCTGGGTACTTGTCCATCATTAGTTaGTCCATCTCGCTATCAAACACAATATTGACGTGG +
Preference number: 6 (lower is better)
Translates to: TCLMPGYLSIIS*SISLSNTILTW
Trigger: CCACGTCAATATTGTGTTTGATAGCGAGATGGACAAACTAATGATGGACAAGTACCCAGGCATTAGGCAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486964.5
CDS CAA 72 bp GTGAAGGCATTGAAAGGCTACTTACCTGCCGGACATTaGCCCCACGAAAACTATCTTCTAGAAAGAATTCTG +
Preference number: 6 (lower is better)
Translates to: VKALKGYLPAGH*PHENYLLERIL
Trigger: CAGAATTCTTTCTAGAAGATAGTTTTCGTGGGGCAAATGTCCGGCAGGTAAGTAGCCTTTCAATGCCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS CAA 90 bp ATGGGTTTGGTGAAGGCATTGAAAGGCTACTTACCTGCCGGACATTaGCCCCACGAAAACTATCTTCTAGAAAGAATTCTGACCATCTTT +
Preference number: 6 (lower is better)
Translates to: MGLVKALKGYLPAGH*PHENYLLERILTIF
Trigger: AAAGATGGTCAGAATTCTTTCTAGAAGATAGTTTTCGTGGGGCAAATGTCCGGCAGGTAAGTAGCCTTTCAATGCCTTCACCAAACCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS GCA 72 bp CTGGTGAAAGGTTTAGTAACAGTATCTGCTATGGACTaGCATGCATGTAACTTCCTCAATTCTAGGCAAGAG +
Preference number: 6 (lower is better)
Translates to: LVKGLVTVSAMD*HACNFLNSRQE
Trigger: CTCTTGCCTAGAATTGAGGAAGTTACATGCATGGCAGTCCATAGCAGATACTGTTACTAAACCTTTCACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS GCA 72 bp GGCCATGCCAGAGTGTTCAATGTAAAACATACATCATaGATCTCCAGGAGGGGATCTTATTTCCATGCTTAT +
Preference number: 6 (lower is better)
Translates to: GHARVFNVKHTS*ISRRGSYFHAY
Trigger: ATAAGCATGGAAATAAGATCCCCTCCTGGAGATGCATGATGTATGTTTTACATTGAACACTCTGGCATGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684026.1
CDS CAA 72 bp ATCTGCCTAATGCCTGGGTACTTGTCCATCATTAGTTaGTCCATCTCGCTATCAAACACAATATTGACGTGG +
Preference number: 6 (lower is better)
Translates to: ICLMPGYLSIIS*SISLSNTILTW
Trigger: CCACGTCAATATTGTGTTTGATAGCGAGATGGACAAACTAATGATGGACAAGTACCCAGGCATTAGGCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000683266.1
ENST00000684556.1
CDS GCA 72 bp ATCCCATGGTCTTTTCTTGGAAACTGCACTAAGGCATaGACATGGCTGATGTCTTTTACACTAAGGAGTTTT +
Preference number: 6 (lower is better)
Translates to: IPWSFLGNCTKA*TWLMSFTLRSF
Trigger: AAAACTCCTTAGTGTAAAAGACATCAGCCATGTGCATGCCTTAGTGCAGTTTCCAAGAAAAGACCATGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS CCA 72 bp CCAAATGTTGTAAAGTTTGTCTATGAGGGACTGGCCTaGAAGTGTACTCAAAAAGGATCGGTCAATAGCAAT +
Preference number: 6 (lower is better)
Translates to: PNVVKFVYEGLA*KCTQKGSVNSN
Trigger: ATTGCTATTGACCGATCCTTTTTGAGTACACTTCCAGGCCAGTCCCTCATAGACAAACTTTACAACATTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000684556.1
CDS CAA 90 bp CACAGAGGTTATAGTCAGCGTTCCACAACATACTCTCACAAGGGCTaGAATATACTGCGTAGGTTTTGTTATACACTCAAAAGGAAAGAA +
Preference number: 6 (lower is better)
Translates to: HRGYSQRSTTYSHKG*NILRRFCYTLKRKE
Trigger: TTCTTTCCTTTTGAGTGTATAACAAAACCTACGCAGTATATTCAAGCCCTTGTGAGAGTATGTTGTGGAACGCTGACTATAACCTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS TCA 72 bp TCATTAGTTTGTCCATCTCGCTATCAAACACAATATTaGCGTGGCTCTGAAGGCGAATCCAAATGTTGTAAA +
Preference number: 6 (lower is better)
Translates to: SLVCPSRYQTQY*RGSEGESKCCK
Trigger: TTTACAACATTTGGATTCGCCTTCAGAGCCACGTCAATATTGTGTTTGATAGCGAGATGGACAAACTAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000486964.5
ENST00000683266.1
ENST00000684556.1
CDS TCA 72 bp ATAGTCAGCGTTCCACAACATACTCTCACAAGGGCTTaGATATACTGCGTAGGTTTTGTTATACACTCAAAA +
Preference number: 6 (lower is better)
Translates to: IVSVPQHTLTRA*IYCVGFVIHSK
Trigger: TTTTGAGTGTATAACAAAACCTACGCAGTATATTCAAGCCCTTGTGAGAGTATGTTGTGGAACGCTGACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS CAA 72 bp TTTCTCATAACTCTTCTCTGTTTGAGCTGCCCACTCTaGACTGTAGTCATCAACCTTTGTTTCAAATGTTTC +
Preference number: 6 (lower is better)
Translates to: FLITLLCLSCPL*TVVINLCFKCF
Trigger: GAAACATTTGAAACAAAGGTTGATGACTACAGTCAAGAGTGGGCAGCTCAAACAGAGAAGAGTTATGAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263857.11
ENST00000409681.1
CDS CAA 72 bp TATAGTCAGCGTTCCACAACATACTCTCACAAGGGCTaGAATATACTGCGTAGGTTTTGTTATACACTCAAA +
Preference number: 6 (lower is better)
Translates to: YSQRSTTYSHKG*NILRRFCYTLK
Trigger: TTTGAGTGTATAACAAAACCTACGCAGTATATTCAAGCCCTTGTGAGAGTATGTTGTGGAACGCTGACTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684177.1
CDS TCA 72 bp CTGTGTAGCTCTTCGAGTGTTTACGTTCCTGAAAGCTaGTGCTTTATTATTCTTCTTTTTGATGGATTCCAT +
Preference number: 6 (lower is better)
Translates to: LCSSSSVYVPES*CFIILLFDGFH
Trigger: ATGGAATCCATCAAAAAGAAGAATAATAAAGCATCAGCTTTCAGGAACGTAAACACTCGAAGAGCTACACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263857.11
ENST00000409681.1
ENST00000492034.1
ENST00000496892.5