RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POLK (Homo sapiens)

Ensembl gene IDs: ENSG00000122008

Ensembl transcript IDs: ENST00000241436.8, ENST00000502567.1, ENST00000503479.6, ENST00000504026.5, ENST00000505069.1, ENST00000505774.5, ENST00000505975.5, ENST00000506928.5, ENST00000508526.5, ENST00000508867.5, ENST00000509126.2, ENST00000510815.6, ENST00000511527.5, ENST00000514141.5, ENST00000514296.5, ENST00000515295.5

Found 627 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAAGACAAGAAATAGAACATTGCCAGCATCCCAGAAGCACCAGGTaGCACTCCCCAATCACACTGCTGTACTTCTCCACAGAGGAAATC +
Preference number: 1 (lower is better)
Translates to: PRQEIEHCQHPRSTR*HSPITLLYFSTEEI
Trigger: GATTTCCTCTGTGGAGAAGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAATGTTCTATTTCTTGTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR CCA 90 bp TCTTTGTCAGTTTTCTCTAATGTACACTCAGTGGCTGACAGGGCTTaGTTTCCAGCCTGTAAAAAGCCAATAATGCTCCTTTGTTGGTGT +
Preference number: 1 (lower is better)
Translates to: SLSVFSNVHSVADRA*FPACKKPIMLLCWC
Trigger: ACACCAACAAAGGAGCATTATTGGCTTTTTACAGGCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAGAGAAAACTGACAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
3UTR GCA 90 bp AATGGGTTTATCCTTCAATTCTGGATTGTCCCTCATTTCTACAGCTaGATAGAAAGCATCCATGTCAATGTGCACTATGGTATTGCTCAA +
Preference number: 1 (lower is better)
Translates to: NGFILQFWIVPHFYS*IESIHVNVHYGIAQ
Trigger: TTGAGCAATACCATAGTGCACATTGACATGGATGCTTTCTATGCAGCTGTAGAAATGAGGGACAATCCAGAATTGAAGGATAAACCCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR CCA 90 bp TCACACTGCTGTACTTCTCCACAGAGGAAATCATTATTCTGGTTCTaGGGACAGCAAAACACTTGCTTTTCTTTACAGTTGTATCTCATA +
Preference number: 1 (lower is better)
Translates to: SHCCTSPQRKSLFWF*GQQNTCFSLQLYLI
Trigger: TATGAGATACAACTGTAAAGAAAAGCAAGTGTTTTGCTGTCCCCAGAACCAGAATAATGATTTCCTCTGTGGAGAAGTACAGCAGTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR GCA 90 bp CTACAGCTGCATAGAAAGCATCCATGTCAATGTGCACTATGGTATTaGTCAAATTTCGGCTTTGTTCTAATTCCATTGCAAATCTGTCAA +
Preference number: 1 (lower is better)
Translates to: LQLHRKHPCQCALWY*SNFGFVLIPLQICQ
Trigger: TTGACAGATTTGCAATGGAATTAGAACAAAGCCGAAATTTGAGCAATACCATAGTGCACATTGACATGGATGCTTTCTATGCAGCTGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR TCA 90 bp TGGCATCCTTCTGTGATTTGCTTCTTTTGCTCTATGCTATGTCTGTaGTATTCATCTATGTTGTGGTTAGCTATTTCCTTCATTTTCACC +
Preference number: 1 (lower is better)
Translates to: WHPSVICFFCSMLCL*YSSMLWLAISFIFT
Trigger: GGTGAAAATGAAGGAAATAGCTAACCACAACATAGATGAATATCACAGACATAGCATAGAGCAAAAGAAGCAAATCACAGAAGGATGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR GCA 90 bp TCAGAAGGACTCTCTTCAAAAAGTAGTGGAGAGATGGATCGTTCATaGTCACTCAGTTTATTAACTTCCTTTCCTGGATTATCATTTTCT +
Preference number: 1 (lower is better)
Translates to: SEGLSSKSSGEMDRS*SLSLLTSFPGLSFS
Trigger: AGAAAATGATAATCCAGGAAAGGAAGTTAATAAACTGAGTGAGCATGAACGATCCATCTCTCCACTACTTTTTGAAGAGAGTCCTTCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR CCA 90 bp TCATTTCTACAGCTGCATAGAAAGCATCCATGTCAATGTGCACTATaGTATTGCTCAAATTTCGGCTTTGTTCTAATTCCATTGCAAATC +
Preference number: 1 (lower is better)
Translates to: SFLQLHRKHPCQCAL*YCSNFGFVLIPLQI
Trigger: GATTTGCAATGGAATTAGAACAAAGCCGAAATTTGAGCAATACCATAGTGCACATTGACATGGATGCTTTCTATGCAGCTGTAGAAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR CCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTCCATGTTGGCGAGGCTaGTCTCAAACTCCTGACCTC +
Preference number: 2 (lower is better)
Translates to: IASIPEAPGATPQSHCCTPCWRG*SQTPDL
Trigger: GAGGTCAGGAGTTTGAGACCAGCCTCGCCAACATGG...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR-3UTR CCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTAGCCATCTGAGTAGCTaGGATTACAGGCGTGTGCCA +
Preference number: 2 (lower is better)
Translates to: IASIPEAPGATPQSHCCTSHLSS*DYRRVP
Trigger: TGGCACACGCCTGTAATCCCAGCTACTCAGATGGCT...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR-3UTR CCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTTCTCGCTCTTCAGGCTaGAGTACAGTGGCAAGATCT +
Preference number: 2 (lower is better)
Translates to: IASIPEAPGATPQSHCCTSRSSG*STVARS
Trigger: AGATCTTGCCACTGTACTCCAGCCTGAAGAGCGAGA...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR-3UTR TCA 90 bp CTTTGTTGGTGTTTCCTGTCCTCTTCATTGGGAAAACTAGATATCCGAACACCCCCTGCCTCAGCCATCTaGGTAGCTGGGATTACAGGC +
Preference number: 2 (lower is better)
Translates to: LCWCFLSSSLGKLDIRTPPASAI*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGATGGCTGAGGCAGG...GGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAAACACCAACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514141.5
3UTR-3UTR TCA 90 bp AATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCATGTACACTCAGTGGCTaGCAGGGCTTGGTTTCCAGC +
Preference number: 2 (lower is better)
Translates to: NPGLFVLVTAFCTPLELPCTLSG*QGLVSS
Trigger: GCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACA...TGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR GCA 90 bp GATCCTGAGCAAGCTCACTGCAAAGTTCTTGACATAGGCTGTATTGCTCTTCCGATTTGGGGCAATGCCTaGACTGGCTGTCAGTGTTGT +
Preference number: 2 (lower is better)
Translates to: DPEQAHCKVLDIGCIALPIWGNA*TGCQCC
Trigger: ACAACACTGACAGCCAGTGCAGGCATTGCCCCAAAT...CGGAAGAGCAATACAGCCTATGTCAAGAACTTTGCAGTGAGCTTGCTCAGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR CCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTAGGAAATCATTATTCTaGTTCTGGGGACAGCAAAAC +
Preference number: 2 (lower is better)
Translates to: IASIPEAPGATPQSHCCTRKSLF*FWGQQN
Trigger: GTTTTGCTGTCCCCAGAACCAGAATAATGATTTCCT...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR-3UTR CCA 90 bp TTCCAGACTGATGCACCCTTGAGCCCTAAAGCAAACAGGACAGGTAAGTATCTGGTGGCTGACAGGGCTTaGTTTCCAGCCTGTAAAAAG +
Preference number: 2 (lower is better)
Translates to: FQTDAPLSPKANRTGKYLVADRA*FPACKK
Trigger: CTTTTTACAGGCTGGAAACCAAGCCCTGTCAGCCAC...CAGATACTTACCTGTCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR TCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTTCTATGCTATGTCTGTaGTATTCATCTATGTTGTGG +
Preference number: 2 (lower is better)
Translates to: IASIPEAPGATPQSHCCTSMLCL*YSSMLW
Trigger: CCACAACATAGATGAATATCACAGACATAGCATAGA...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR-3UTR GCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTCATCCTTCTGTGATTTaGTTCTTTTGCTCTATGCTA +
Preference number: 2 (lower is better)
Translates to: IASIPEAPGATPQSHCCTHPSVI*FFCSML
Trigger: TAGCATAGAGCAAAAGAAGCAAATCACAGAAGGATG...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR-3UTR CCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTAGAAGTAACAGAAAATaGCTTCCAACTTCATGTTGC +
Preference number: 2 (lower is better)
Translates to: IASIPEAPGATPQSHCCTRSNRK*LPTSCC
Trigger: GCAACATGAAGTTGGAAGCCATTTTCTGTTACTTCT...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR-3UTR TCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCCCTGCCTCAGCCATCTaGGTAGCTGGGATTACAGGC +
Preference number: 2 (lower is better)
Translates to: GTNFSTVIVFNVRADIITPASAI*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGATGGCTGAGGCAGG...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR-3UTR TCA 90 bp TACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCATGTACACTCAGTGGCTaGCAGGGCTTGGTTTCCAGC +
Preference number: 2 (lower is better)
Translates to: YFVINPGLFVLVTAFCTPCTLSG*QGLVSS
Trigger: GCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACA...TGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR TCA 90 bp GCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCAGACTGATGCACCCTTaGGCCCTAAAGCAAACAGGA +
Preference number: 2 (lower is better)
Translates to: AFLFLLQPSVLHLSYQYFRLMHP*ALKQTG
Trigger: TCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCT...GAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTTGTTTCTTGGTCATCTaGATTTCCTTTCACTTGAAA +
Preference number: 2 (lower is better)
Translates to: IASIPEAPGATPQSHCCTCFLVI*ISFHLK
Trigger: TTTCAAGTGAAAGGAAATCCAGATGACCAAGAAACA...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR-3UTR GCA 90 bp GATCCTGAGCAAGCTCACTGCAAAGTTCTTGACATAGGCTGTATTGCTCTTCCGCCTCATTTCTACAGCTaGATAGAAAGCATCCATGTC +
Preference number: 2 (lower is better)
Translates to: DPEQAHCKVLDIGCIALPPHFYS*IESIHV
Trigger: GACATGGATGCTTTCTATGCAGCTGTAGAAATGAGG...CGGAAGAGCAATACAGCCTATGTCAAGAACTTTGCAGTGAGCTTGCTCAGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR GCA 90 bp GATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGATTTGGGGCAATGCCTaGACTGGCTGTCAGTGTTGT +
Preference number: 2 (lower is better)
Translates to: DLKSFVLRYKQDKLELGLIWGNA*TGCQCC
Trigger: ACAACACTGACAGCCAGTGCAGGCATTGCCCCAAAT...CAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505975.5
3UTR-3UTR CCA 90 bp TTCCAGACTGATGCACCCTTGAGCCCTAAAGCAAACAGGACAGGTAAGTATCTGGGACAAACTAGAGCTTaGCCTGTTTTCACTTCACAT +
Preference number: 2 (lower is better)
Translates to: FQTDAPLSPKANRTGKYLGQTRA*PVFTSH
Trigger: ATGTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCC...CAGATACTTACCTGTCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR TCA 90 bp TGGCGGTATTCTTGTCTAAATGATCCAACATCTTCGTTTTCCAATGAAACAGTATGTACACTCAGTGGCTaGCAGGGCTTGGTTTCCAGC +
Preference number: 2 (lower is better)
Translates to: WRYSCLNDPTSSFSNETVCTLSG*QGLVSS
Trigger: GCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACA...TACTGTTTCATTGGAAAACGAAGATGTTGGATCATTTAGACAAGAATACCGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR TCA 90 bp ATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGGGACAGGTAAGTATCTaGCAGTCATCTGAATTCTCT +
Preference number: 2 (lower is better)
Translates to: ILAFLFLLQPSVLHLSYQGQVSI*QSSEFS
Trigger: AGAGAATTCAGATGACTGTCAGATACTTACCTGTCC...CTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR TCA 90 bp TACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCAAGACTGATGCACCCTTaGGCCCTAAAGCAAACAGGA +
Preference number: 2 (lower is better)
Translates to: YFVINPGLFVLVTAFCTPRLMHP*ALKQTG
Trigger: TCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCT...TGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR GCA 90 bp CTCCATCCCTCGTCAGGTGTGTTGAACCTAGACCCAAGGAGATATGAAGGAAATGCATCCATGTCAATGTaGACTATGGTATTGCTCAAA +
Preference number: 2 (lower is better)
Translates to: LHPSSGVLNLDPRRYEGNASMSM*TMVLLK
Trigger: TTTGAGCAATACCATAGTGCACATTGACATGGATGC...ATTTCCTTCATATCTCCTTGGGTCTAGGTTCAACACACCTGACGAGGGATGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR CCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCAGGGTCTCACCATGTTaGCGAGGCTGGTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: GTNFSTVIVFNVRADIITRVSPC*RGWSQT
Trigger: AGTTTGAGACCAGCCTCGCCAACATGGTGAGACCCT...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR-3UTR CCA 90 bp CTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTCTAATGTACACTCAGTaGCTGACAGGGCTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: LCHQSWPFCSCYSLLYSTLMYTQ*LTGLGF
Trigger: GAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAG...AGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CCA 90 bp CTTGGAAAGGATCTCCTGGGGGCTGCACATCAGAAGGACTCTCTTCAAAAAGTACACTATTATAAGTTGTaGGCACAGCCTCTTAGCAAT +
Preference number: 2 (lower is better)
Translates to: LGKDLLGAAHQKDSLQKVHYYKL*AQPLSN
Trigger: ATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTG...TACTTTTTGAAGAGAGTCCTTCTGATGTGCAGCCCCCAGGAGATCCTTTCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR CAA 90 bp ACATTCATCTACATGTTTATTCAAGGCTTCCAGACTGATGCACCCTaGAGCCCTAAAGCAAACAGGACAGGTAAGTATCTGACAGTCATC +
Preference number: 2 (lower is better)
Translates to: TFIYMFIQGFQTDAP*SPKANRTGKYLTVI
Trigger: GATGACTGTCAGATACTTACCTGTCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAAGCCTTGAATAAACATGTAGATGAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR TCA 90 bp GCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCGGACAGGTAAGTATCTaGCAGTCATCTGAATTCTCT +
Preference number: 2 (lower is better)
Translates to: AFLFLLQPSVLHLSYQYFGQVSI*QSSEFS
Trigger: AGAGAATTCAGATGACTGTCAGATACTTACCTGTCC...GAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR TCA 90 bp TCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTAGACTGATGCACCCTTaGGCCCTAAAGCAAACAGGA +
Preference number: 2 (lower is better)
Translates to: SFVLRYKQDKLELGLFSLRLMHP*ALKQTG
Trigger: TCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCT...AAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR GCA 90 bp TATTGCTCTTCCGCTTTATTTATCTCACTGAATGTCCTCTCAACGCTCATACTTTTGTATTTGGGGCAATaGCTGCACTGGCTGTCAGTG +
Preference number: 2 (lower is better)
Translates to: YCSSALFISLNVLSTLILLYLGQ*LHWLSV
Trigger: CACTGACAGCCAGTGCAGGCATTGCCCCAAATACAA...AAGTATGAGCGTTGAGAGGACATTCAGTGAGATAAATAAAGCGGAAGAGCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR CCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCCATCAGTCATGGGATTaGATTGGCATGCTAGCAGGC +
Preference number: 2 (lower is better)
Translates to: GTNFSTVIVFNVRADIITHQSWD*IGMLAG
Trigger: GCCTGCTAGCATGCCAATCCAATCCCATGACTGATG...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR-3UTR CCA 90 bp GACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCAGTGGCTGACAGGGCTTaGTTTCCAGCCTGTAAAAAG +
Preference number: 2 (lower is better)
Translates to: DLLGRLEHSSLLCLLLKAVADRA*FPACKK
Trigger: CTTTTTACAGGCTGGAAACCAAGCCCTGTCAGCCAC...TGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CCA 90 bp TACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTAATGTACACTCAGTaGCTGACAGGGCTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: YFVINPGLFVLVTAFCTPLMYTQ*LTGLGF
Trigger: GAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAG...TGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CCA 90 bp GCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCGGACAAACTAGAGCTTaGCCTGTTTTCACTTCACAT +
Preference number: 2 (lower is better)
Translates to: AFLFLLQPSVLHLSYQYFGQTRA*PVFTSH
Trigger: ATGTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCC...GAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR GCA 90 bp ACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACAAGGAGAGAAAGCAATaGCCTCTGTTGGTAAAGTTC +
Preference number: 2 (lower is better)
Translates to: TLSSILAFLFLLQPSVLHKERKQ*PLLVKF
Trigger: GAACTTTACCAACAGAGGGCATTGCTTTCTCTCCTT...GTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR CCA 90 bp CTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCATCTATGGTGGCTGACAGGGCTTaGTTTCCAGCCTGTAAAAAG +
Preference number: 2 (lower is better)
Translates to: LGRLEHSSLLCLLLKASMVADRA*FPACKK
Trigger: CTTTTTACAGGCTGGAAACCAAGCCCTGTCAGCCAC...CATAGATGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CCA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTCTAATGTACACTCAGTaGCTGACAGGGCTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELLMYTQ*LTGLGF
Trigger: GAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAG...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CCA 90 bp TCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCTAATGTACACTCAGTaGCTGACAGGGCTTGGTTTC +
Preference number: 2 (lower is better)
Translates to: SFVLRYKQDKLELGLFSLLMYTQ*LTGLGF
Trigger: GAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAG...AAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CCA 90 bp TTCCAGACTGATGCACCCTTGAGCCCTAAAGCAAACAGGACAGGTAAGTATCTGATTAAAAGACTTGCTTaGGAGACTAGAACATTCTTC +
Preference number: 2 (lower is better)
Translates to: FQTDAPLSPKANRTGKYLIKRLA*ETRTFF
Trigger: GAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAAT...CAGATACTTACCTGTCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CCA 90 bp ACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACAGCTACCAGTACTTCTaGAGCTTTCTTTGGGTTGAT +
Preference number: 2 (lower is better)
Translates to: TLSSILAFLFLLQPSVLHSYQYF*SFLWVD
Trigger: ATCAACCCAAAGAAAGCTCCAGAAGTACTGGTAGCT...GTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CCA 90 bp AGAAAGCATCCATGTCAATGTGCACTATGGTATTGCTCAAATTTCGGCTTTGTTCTTAGCAATAAATCCTaGCATGGCTGCACGAACACC +
Preference number: 2 (lower is better)
Translates to: RKHPCQCALWYCSNFGFVLSNKS*HGCTNT
Trigger: GGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAG...AACAAAGCCGAAATTTGAGCAATACCATAGTGCACATTGACATGGATGCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR CCA 90 bp CAGAAGGACTCTCTTCAAAAAGTAGTGGAGAGATGGATCGTTCATGCTCACTCATGTCAATGTGCACTATaGTATTGCTCAAATTTCGGC +
Preference number: 2 (lower is better)
Translates to: QKDSLQKVVERWIVHAHSCQCAL*YCSNFG
Trigger: GCCGAAATTTGAGCAATACCATAGTGCACATTGACA...TGAGTGAGCATGAACGATCCATCTCTCCACTACTTTTTGAAGAGAGTCCTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR TCA 90 bp GCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCAACTTGGAATGGTTGTaGTGTCTGGAAACTTTGTTT +
Preference number: 2 (lower is better)
Translates to: AFLFLLQPSVLHLSYQYFNLEWL*CLETLF
Trigger: AAACAAAGTTTCCAGACATCACAACCATTCCAAGTT...GAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR TCA 90 bp CTGAAACGAATTTCCTTTACCACTTCCTGGGCTGATGTTCCAAAAACAACTGAGCCTTGCATGGTAATTTaGAGTAGACAGCATACTCAT +
Preference number: 2 (lower is better)
Translates to: LKRISFTTSWADVPKTTEPCMVI*SRQHTH
Trigger: ATGAGTATGCTGTCTACTTCAAATTACCATGCAAGG...CTCAGTTGTTTTTGGAACATCAGCCCAGGAAGTGGTAAAGGAAATTCGTTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR GCA 90 bp CTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCATCTATGAAATCCTGGCATGGCTaGACGAACACCAAATCTCCT +
Preference number: 2 (lower is better)
Translates to: LGRLEHSSLLCLLLKASMKSWHG*TNTKSP
Trigger: AGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTT...CATAGATGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505975.5
3UTR-3UTR GCA 90 bp TCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAAGATACTGTAAAATCCTGGCATGGCTaGACGAACACCAAATCTCCT +
Preference number: 2 (lower is better)
Translates to: SLAYDVYAEQEGTTEDTVKSWHG*TNTKSP
Trigger: AGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTT...TACAGTATCTTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR GCA 90 bp GCTGTATTGCTCTTCCGCTTTATTTATCTCACTGAATGTCCTCTCAACGCTCATGCATCCATGTCAATGTaGACTATGGTATTGCTCAAA +
Preference number: 2 (lower is better)
Translates to: AVLLFRFIYLTECPLNAHASMSM*TMVLLK
Trigger: TTTGAGCAATACCATAGTGCACATTGACATGGATGC...ATGAGCGTTGAGAGGACATTCAGTGAGATAAATAAAGCGGAAGAGCAATACAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR CCA 90 bp TACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCAAGCTACCAGTACTTCTaGAGCTTTCTTTGGGTTGAT +
Preference number: 2 (lower is better)
Translates to: YFVINPGLFVLVTAFCTPSYQYF*SFLWVD
Trigger: ATCAACCCAAAGAAAGCTCCAGAAGTACTGGTAGCT...TGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CCA 90 bp AAGACTCATGGCCATAAAATTGGGATCATAATCAGCAAGTATTTCCTTAACCTCCTTAGCAATAAATCCTaGCATGGCTGCACGAACACC +
Preference number: 2 (lower is better)
Translates to: KTHGHKIGIIISKYFLNLLSNKS*HGCTNT
Trigger: GGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAG...GAGGTTAAGGAAATACTTGCTGATTATGATCCCAATTTTATGGCCATGAGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR CAA 90 bp GAATTTGGTATTGTCCATTTGGTTTATTCTTATCACTGCATACTTTaGCTAACATTGTATTTGGGGCAATGCCTGCACTGGCTGTCAGTG +
Preference number: 2 (lower is better)
Translates to: EFGIVHLVYSYHCIL*LTLYLGQCLHWLSV
Trigger: CACTGACAGCCAGTGCAGGCATTGCCCCAAATACAATGTTAGCAAAAGTATGCAGTGATAAGAATAAACCAAATGGACAATACCAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR TCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCCACAGAAAACAAAAGTaGAGGCATAAGAGGGAGGAA +
Preference number: 2 (lower is better)
Translates to: GTNFSTVIVFNVRADIITHRKQK*RHKREE
Trigger: TTCCTCCCTCTTATGCCTTCACTTTTGTTTTCTGTG...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR-3UTR TCA 90 bp GTAGACAGCATACTCATTGATCCTACAGCAATGGGTTTATCCTTCAATTCTGGAACAGGAAGGTACAACTaGAGATACTGTAGCATAATG +
Preference number: 2 (lower is better)
Translates to: VDSILIDPTAMGLSFNSGTGRYN*RYCSIM
Trigger: CATTATGCTACAGTATCTTCAGTTGTACCTTCCTGT...TCCAGAATTGAAGGATAAACCCATTGCTGTAGGATCAATGAGTATGCTGTCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR TCA 90 bp ACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACAACTTGGAATGGTTGTaGTGTCTGGAAACTTTGTTT +
Preference number: 2 (lower is better)
Translates to: TLSSILAFLFLLQPSVLHNLEWL*CLETLF
Trigger: AAACAAAGTTTCCAGACATCACAACCATTCCAAGTT...GTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR TCA 90 bp CTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTGGTAGCAGAAACATGTaGACACGAGAACATTTTAAA +
Preference number: 2 (lower is better)
Translates to: LCHQSWPFCSCYSLLYSTGSRNM*TREHFK
Trigger: TTTAAAATGTTCTCGTGTTCACATGTTTCTGCTACC...AGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR TCA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTAGACAGCATACTCATTaGTCCTACAGCAATGGGTTT +
Preference number: 2 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELRQHTH*SYSNGF
Trigger: AAACCCATTGCTGTAGGATCAATGAGTATGCTGTCT...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505975.5
3UTR-3UTR TCA 90 bp TGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACATCCTTGCATGGTAATTTaGAGTAGACAGCATACTCAT +
Preference number: 2 (lower is better)
Translates to: CSTLQTGQTRAWPVFTSHPCMVI*SRQHTH
Trigger: ATGAGTATGCTGTCTACTTCAAATTACCATGCAAGG...ATGTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505975.5
3UTR-3UTR GCA 90 bp GTAGATCCTGAGCAAGCTCACTGCAAAGTTCTTGACATAGGCTGTATTGCTCTTGTCAGTGTTGTTTTCTaGTCAATTCTGAAACGAATT +
Preference number: 2 (lower is better)
Translates to: VDPEQAHCKVLDIGCIALVSVVF*SILKRI
Trigger: AATTCGTTTCAGAATTGAGCAGAAAACAACACTGAC...AAGAGCAATACAGCCTATGTCAAGAACTTTGCAGTGAGCTTGCTCAGGATCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR CCA 90 bp GCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCATTAAAAGACTTGCTTaGGAGACTAGAACATTCTTC +
Preference number: 2 (lower is better)
Translates to: AFLFLLQPSVLHLSYQYFIKRLA*ETRTFF
Trigger: GAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAAT...GAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CCA 90 bp TCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTAAAGTAGTGGAGAGATaGATCGTTCATGCTCACTCA +
Preference number: 2 (lower is better)
Translates to: SFVLRYKQDKLELGLFSLKVVER*IVHAHS
Trigger: TGAGTGAGCATGAACGATCCATCTCTCCACTACTTT...AAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505975.5
3UTR-3UTR TCA 90 bp TACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCAAACTTGGAATGGTTGTaGTGTCTGGAAACTTTGTTT +
Preference number: 2 (lower is better)
Translates to: YFVINPGLFVLVTAFCTPNLEWL*CLETLF
Trigger: AAACAAAGTTTCCAGACATCACAACCATTCCAAGTT...TGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR TCA 90 bp TGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACATGGTAGCAGAAACATGTaGACACGAGAACATTTTAAA +
Preference number: 2 (lower is better)
Translates to: CSTLQTGQTRAWPVFTSHGSRNM*TREHFK
Trigger: TTTAAAATGTTCTCGTGTTCACATGTTTCTGCTACC...ATGTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CCA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTATCTGTCAACCTCTTTaGCATATGATGTTTATGCTG +
Preference number: 2 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELICQPL*HMMFML
Trigger: CAGCATAAACATCATATGCCAAAGAGGTTGACAGAT...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505975.5
3UTR-3UTR TCA 90 bp CTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCATCTATGGGTAGCAGAAACATGTaGACACGAGAACATTTTAAA +
Preference number: 2 (lower is better)
Translates to: LGRLEHSSLLCLLLKASMGSRNM*TREHFK
Trigger: TTTAAAATGTTCTCGTGTTCACATGTTTCTGCTACC...CATAGATGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CCA 90 bp TTAAAAGACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTCACTATTATAAGTTGTaGGCACAGCCTCTTAGCAAT +
Preference number: 2 (lower is better)
Translates to: LKDLLGRLEHSSLLCLLLHYYKL*AQPLSN
Trigger: ATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTG...AAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505975.5
3UTR CAA 90 bp TTTCTAATGGGTAAATCCTTGATGAAGTCCATCACAGCTTGTCTATaGGGAAGAATTTGGTATTGTCCATTTGGTTTATTCTTATCACTG +
Preference number: 2 (lower is better)
Translates to: FLMGKSLMKSITACL*GRIWYCPFGLFLSL
Trigger: CAGTGATAAGAATAAACCAAATGGACAATACCAAATTCTTCCCAATAGACAAGCTGTGATGGACTTCATCAAGGATTTACCCATTAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR TCA 90 bp TTAAAAGACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAACTTGGAATGGTTGTaGTGTCTGGAAACTTTGTTT +
Preference number: 2 (lower is better)
Translates to: LKDLLGRLEHSSLLCLLLNLEWL*CLETLF
Trigger: AAACAAAGTTTCCAGACATCACAACCATTCCAAGTT...AAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CCA 90 bp TGGCGGTATTCTTGTCTAAATGATCCAACATCTTCGTTTTCCAATGAAACAGTAATTAAAAGACTTGCTTaGGAGACTAGAACATTCTTC +
Preference number: 2 (lower is better)
Translates to: WRYSCLNDPTSSFSNETVIKRLA*ETRTFF
Trigger: GAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAAT...TACTGTTTCATTGGAAAACGAAGATGTTGGATCATTTAGACAAGAATACCGCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CAA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTCAGGGTCTCACCATGTaGGCGAGGCTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: IASIPEAPGATPQSHCCTQGLTM*ARLVSN
Trigger: GTTTGAGACCAGCCTCGCCAACATGGTGAGACCCTG...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR-3UTR CAA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTTGGCTGACTGCAGCTTaGACCTCCCAGGTTCAAGTA +
Preference number: 3 (lower is better)
Translates to: IASIPEAPGATPQSHCCTWLTAA*TSQVQV
Trigger: TACTTGAACCTGGGAGGTCAAAGCTGCAGTCAGCCA...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR-3UTR CAA 90 bp TTCCAGACTGATGCACCCTTGAGCCCTAAAGCAAACAGGACAGGTAAGTATCTGCCCTCGTCAGGTGTGTaGAACCTAGACCCAAGGAGA +
Preference number: 3 (lower is better)
Translates to: FQTDAPLSPKANRTGKYLPSSGV*NLDPRR
Trigger: TCTCCTTGGGTCTAGGTTCAACACACCTGACGAGGG...CAGATACTTACCTGTCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505975.5
3UTR GCA 72 bp GAAATAGAACATTGCCAGCATCCCAGAAGCACCAGGTaGCACTCCCCAATCACACTGCTGTACTTCTCCACA +
Preference number: 3 (lower is better)
Translates to: EIEHCQHPRSTR*HSPITLLYFST
Trigger: TGTGGAGAAGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAATGTTCTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR-3UTR CAA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTGCATCCTTCTGTGATTaGCTTCTTTTGCTCTATGCT +
Preference number: 3 (lower is better)
Translates to: IASIPEAPGATPQSHCCTASFCD*LLLLYA
Trigger: AGCATAGAGCAAAAGAAGCAAATCACAGAAGGATGC...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR GCA 72 bp ATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTaGTGTACTTCTCCACAGAGGAAATCATTATTCTGG +
Preference number: 3 (lower is better)
Translates to: IPEAPGATPQSH*CTSPQRKSLFW
Trigger: CCAGAATAATGATTTCCTCTGTGGAGAAGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR-3UTR CAA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTAGTCTAGTTACCACTTaGTCAAAGTCTGTGAGTTCT +
Preference number: 3 (lower is better)
Translates to: IASIPEAPGATPQSHCCTSLVTT*SKSVSS
Trigger: AGAACTCACAGACTTTGACAAAGTGGTAACTAGACT...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR-3UTR CAA 90 bp TTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCTGGCAGACTGATGCACCCTaGAGCCCTAAAGCAAACAGG +
Preference number: 3 (lower is better)
Translates to: FLFLLQPSVLHLSYQYFWQTDAP*SPKANR
Trigger: CCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTG...CCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CAA 90 bp TTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACCAGACTGATGCACCCTaGAGCCCTAAAGCAAACAGG +
Preference number: 3 (lower is better)
Translates to: FVLRYKQDKLELGLFSLHQTDAP*SPKANR
Trigger: CCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTG...GTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CAA 90 bp TTCCAGACTGATGCACCCTTGAGCCCTAAAGCAAACAGGACAGGTAAGTATCTGTCAATCCTGGCCTTTTaGTTCTTGTTACAGCCTTCT +
Preference number: 3 (lower is better)
Translates to: FQTDAPLSPKANRTGKYLSILAF*FLLQPS
Trigger: AGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGA...CAGATACTTACCTGTCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CAA 90 bp GATCCTGAGCAAGCTCACTGCAAAGTTCTTGACATAGGCTGTATTGCTCTTCCGGAAGTCCATCACAGCTaGTCTATTGGGAAGAATTTG +
Preference number: 3 (lower is better)
Translates to: DPEQAHCKVLDIGCIALPEVHHS*SIGKNL
Trigger: CAAATTCTTCCCAATAGACAAGCTGTGATGGACTTC...CGGAAGAGCAATACAGCCTATGTCAAGAACTTTGCAGTGAGCTTGCTCAGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR GCA 72 bp TCTTCAAAGTTCACTTGGAAAGGATCTCCTGGGGGCTaGACATCAGAAGGACTCTCTTCAAAAAGTAGTGGA +
Preference number: 3 (lower is better)
Translates to: SSKFTWKGSPGG*TSEGLSSKSSG
Trigger: TCCACTACTTTTTGAAGAGAGTCCTTCTGATGTGCAGCCCCCAGGAGATCCTTTCCAAGTGAACTTTGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR CAA 90 bp TATTGCTCTTCCGCTTTATTTATCTCACTGAATGTCCTCTCAACGCTCATACTTCAGACTGATGCACCCTaGAGCCCTAAAGCAAACAGG +
Preference number: 3 (lower is better)
Translates to: YCSSALFISLNVLSTLILQTDAP*SPKANR
Trigger: CCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTG...AAGTATGAGCGTTGAGAGGACATTCAGTGAGATAAATAAAGCGGAAGAGCAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505975.5
3UTR-3UTR CAA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTCAGACTGATGCACCCTaGAGCCCTAAAGCAAACAGG +
Preference number: 3 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELQTDAP*SPKANR
Trigger: CCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTG...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CAA 90 bp CAGCTGCATAGAAAGCATCCATGTCAATGTGCACTATGGTATTGCTCAAATTTCGGGCACTATTATAAGTaGTGGGCACAGCCTCTTAGC +
Preference number: 3 (lower is better)
Translates to: QLHRKHPCQCALWYCSNFGHYYK*WAQPLS
Trigger: GCTAAGAGGCTGTGCCCACAACTTATAATAGTGCCC...GAAATTTGAGCAATACCATAGTGCACATTGACATGGATGCTTTCTATGCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR CAA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCTACAGTGGCAAGATCTaGGCTGACTGCAGCTTTGAC +
Preference number: 3 (lower is better)
Translates to: GTNFSTVIVFNVRADIITYSGKI*ADCSFD
Trigger: GTCAAAGCTGCAGTCAGCCAAGATCTTGCCACTGTA...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR-3UTR CAA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCACATCAGTCATGGGATaGGATTGGCATGCTAGCAGG +
Preference number: 3 (lower is better)
Translates to: GTNFSTVIVFNVRADIITTSVMG*DWHASR
Trigger: CCTGCTAGCATGCCAATCCAATCCCATGACTGATGT...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR-3UTR CAA 90 bp TCTGTAGATCCTGAGCAAGCTCACTGCAAAGTTCTTGACATAGGCTGTATTGCTTTCCTGTCCTCTTCATaGGGAAAACTAGATATCCGA +
Preference number: 3 (lower is better)
Translates to: SVDPEQAHCKVLDIGCIAFLSSS*GKLDIR
Trigger: TCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAA...AGCAATACAGCCTATGTCAAGAACTTTGCAGTGAGCTTGCTCAGGATCTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505975.5
3UTR-3UTR CAA 90 bp ATCTACATGTTTATTCAAGGCTTCCAGACTGATGCACCCTTGAGCCCTAAAGCATTCCTGTCCTCTTCATaGGGAAAACTAGATATCCGA +
Preference number: 3 (lower is better)
Translates to: IYMFIQGFQTDAPLSPKAFLSSS*GKLDIR
Trigger: TCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAA...TGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAAGCCTTGAATAAACATGTAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CAA 90 bp CTTTGTTGGTGTTTCCTGTCCTCTTCATTGGGAAAACTAGATATCCGAACACCCTTCCTGTCCTCTTCATaGGGAAAACTAGATATCCGA +
Preference number: 3 (lower is better)
Translates to: LCWCFLSSSLGKLDIRTPFLSSS*GKLDIR
Trigger: TCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAA...GGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAAACACCAACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CAA 90 bp CTTTGTTGGTGTTTCCTGTCCTCTTCATTGGGAAAACTAGATATCCGAACACCCACATCCACATGCACATaGAACAGGGTTAGATCTGAA +
Preference number: 3 (lower is better)
Translates to: LCWCFLSSSLGKLDIRTPTSTCT*NRVRSE
Trigger: TTCAGATCTAACCCTGTTCAATGTGCATGTGGATGT...GGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAAACACCAACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CAA 90 bp GACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCAGGGCACTATTATAAGTaGTGGGCACAGCCTCTTAGC +
Preference number: 3 (lower is better)
Translates to: DLLGRLEHSSLLCLLLKAGHYYK*WAQPLS
Trigger: GCTAAGAGGCTGTGCCCACAACTTATAATAGTGCCC...TGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505975.5
3UTR-3UTR CAA 90 bp TTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCTGGTCCTTCAATTCTGGATaGTCCCTCATTTCTACAGCT +
Preference number: 3 (lower is better)
Translates to: FLFLLQPSVLHLSYQYFWSFNSG*SLISTA
Trigger: AGCTGTAGAAATGAGGGACAATCCAGAATTGAAGGA...CCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505975.5
3UTR-3UTR CAA 90 bp GCTGTATTGCTCTTCCGCTTTATTTATCTCACTGAATGTCCTCTCAACGCTCATTCCTTCAATTCTGGATaGTCCCTCATTTCTACAGCT +
Preference number: 3 (lower is better)
Translates to: AVLLFRFIYLTECPLNAHSFNSG*SLISTA
Trigger: AGCTGTAGAAATGAGGGACAATCCAGAATTGAAGGA...ATGAGCGTTGAGAGGACATTCAGTGAGATAAATAAAGCGGAAGAGCAATACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR CAA 90 bp CTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTCTAATGGGTAAATCCTaGATGAAGTCCATCACAGCT +
Preference number: 3 (lower is better)
Translates to: LCHQSWPFCSCYSLLYSTLMGKS*MKSITA
Trigger: AGCTGTGATGGACTTCATCAAGGATTTACCCATTAG...AGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR GCA 72 bp ATCCTTCAATTCTGGATTGTCCCTCATTTCTACAGCTaGATAGAAAGCATCCATGTCAATGTGCACTATGGT +
Preference number: 3 (lower is better)
Translates to: ILQFWIVPHFYS*IESIHVNVHYG
Trigger: ACCATAGTGCACATTGACATGGATGCTTTCTATGCAGCTGTAGAAATGAGGGACAATCCAGAATTGAAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR CAA 90 bp CTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTTGATGTTGAGTACTTaGTCATCAATCCTGGCCTTT +
Preference number: 3 (lower is better)
Translates to: LCHQSWPFCSCYSLLYSTLMLST*SSILAF
Trigger: AAAGGCCAGGATTGATGACAAAGTACTCAACATCAA...AGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
3UTR-3UTR CAA 90 bp TGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACATAATAATGCTCCTTTGTaGGTGTTTCCTGTCCTCTTC +
Preference number: 3 (lower is better)
Translates to: CSTLQTGQTRAWPVFTSHNNAPL*VFPVLF
Trigger: GAAGAGGACAGGAAACACCAACAAAGGAGCATTATT...ATGTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CAA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCGGCATGTGTGAATCTTaGAGAGCCCTTACAAATGTT +
Preference number: 3 (lower is better)
Translates to: GTNFSTVIVFNVRADIITGMCES*RALTNV
Trigger: AACATTTGTAAGGGCTCTCAAAGATTCACACATGCC...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR-3UTR CAA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTTTCCTGTCCTCTTCATaGGGAAAACTAGATATCCGA +
Preference number: 3 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELFLSSS*GKLDIR
Trigger: TCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAA...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CAA 90 bp AGAAAGCATCCATGTCAATGTGCACTATGGTATTGCTCAAATTTCGGCTTTGTTAATAATGCTCCTTTGTaGGTGTTTCCTGTCCTCTTC +
Preference number: 3 (lower is better)
Translates to: RKHPCQCALWYCSNFGFVNNAPL*VFPVLF
Trigger: GAAGAGGACAGGAAACACCAACAAAGGAGCATTATT...AACAAAGCCGAAATTTGAGCAATACCATAGTGCACATTGACATGGATGCTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505975.5
3UTR-3UTR CAA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTAATAATGCTCCTTTGTaGGTGTTTCCTGTCCTCTTC +
Preference number: 3 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELNNAPL*VFPVLF
Trigger: GAAGAGGACAGGAAACACCAACAAAGGAGCATTATT...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
3UTR CCA 72 bp TGTACTTCTCCACAGAGGAAATCATTATTCTGGTTCTaGGGACAGCAAAACACTTGCTTTTCTTTACAGTTG +
Preference number: 3 (lower is better)
Translates to: CTSPQRKSLFWF*GQQNTCFSLQL
Trigger: CAACTGTAAAGAAAAGCAAGTGTTTTGCTGTCCCCAGAACCAGAATAATGATTTCCTCTGTGGAGAAGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241436.8
3UTR CCA 72 bp CAGCTGCATAGAAAGCATCCATGTCAATGTGCACTATaGTATTGCTCAAATTTCGGCTTTGTTCTAATTCCA +
Preference number: 3 (lower is better)
Translates to: QLHRKHPCQCAL*YCSNFGFVLIP
Trigger: TGGAATTAGAACAAAGCCGAAATTTGAGCAATACCATAGTGCACATTGACATGGATGCTTTCTATGCAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR CAA 90 bp GACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCATTGATGTTGAGTACTTaGTCATCAATCCTGGCCTTT +
Preference number: 3 (lower is better)
Translates to: DLLGRLEHSSLLCLLLKALMLST*SSILAF
Trigger: AAAGGCCAGGATTGATGACAAAGTACTCAACATCAA...TGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR-3UTR CAA 90 bp TATTGCTCTTCCGCTTTATTTATCTCACTGAATGTCCTCTCAACGCTCATACTTTTGATGTTGAGTACTTaGTCATCAATCCTGGCCTTT +
Preference number: 3 (lower is better)
Translates to: YCSSALFISLNVLSTLILLMLST*SSILAF
Trigger: AAAGGCCAGGATTGATGACAAAGTACTCAACATCAA...AAGTATGAGCGTTGAGAGGACATTCAGTGAGATAAATAAAGCGGAAGAGCAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR-3UTR CAA 90 bp TTAAAACTTGGAATGGTTGTGATGTCTGGAAACTTTGTTTATTCACGGCTTCACAATAATGCTCCTTTGTaGGTGTTTCCTGTCCTCTTC +
Preference number: 3 (lower is better)
Translates to: LKLGMVVMSGNFVYSRLHNNAPL*VFPVLF
Trigger: GAAGAGGACAGGAAACACCAACAAAGGAGCATTATT...GTGAAGCCGTGAATAAACAAAGTTTCCAGACATCACAACCATTCCAAGTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
3UTR GCA 72 bp CTCTCTTCAAAAAGTAGTGGAGAGATGGATCGTTCATaGTCACTCAGTTTATTAACTTCCTTTCCTGGATTA +
Preference number: 3 (lower is better)
Translates to: LSSKSSGEMDRS*SLSLLTSFPGL
Trigger: TAATCCAGGAAAGGAAGTTAATAAACTGAGTGAGCATGAACGATCCATCTCTCCACTACTTTTTGAAGAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR GCA 72 bp GACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATaGTTATTACTTAAAGCATCTATGCTTTCTGCTTTA +
Preference number: 3 (lower is better)
Translates to: DLLGRLEHSSLL*LLLKASMLSAL
Trigger: TAAAGCAGAAAGCATAGATGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
3UTR GCA 72 bp CATAGAAAGCATCCATGTCAATGTGCACTATGGTATTaGTCAAATTTCGGCTTTGTTCTAATTCCATTGCAA +
Preference number: 3 (lower is better)
Translates to: HRKHPCQCALWY*SNFGFVLIPLQ
Trigger: TTGCAATGGAATTAGAACAAAGCCGAAATTTGAGCAATACCATAGTGCACATTGACATGGATGCTTTCTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
3UTR TCA 72 bp CTTGAGCTACCAGTACTTCTGGAGCTTTCTTTGGGTTaGTTAACTGGGTTAAATTTATCCTTTCTTAATTCT +
Preference number: 3 (lower is better)
Translates to: LELPVLLELSLG*LTGLNLSFLNS
Trigger: AGAATTAAGAAAGGATAAATTTAACCCAGTTAATCAACCCAAAGAAAGCTCCAGAAGTACTGGTAGCTCAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTCAACTCCCAGGAGGCTaGGCGAGCGACGGACCAACG +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTQLPGG*ASDGPT
Trigger: CGTTGGTCCGTCGCTCGCGCAGCCTCCTGGGAGTTG...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR GCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTAGAATGCAGCACAGCTaGATCCCTACCCCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTRMQHS*IPTPPS
Trigger: AGAGGGCGGGGTAGGGATGCAGCTGTGCTGCATTCT...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR GCA 90 bp AAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCGCGGAAGCGGCCAGATaGTCCCGGGCTTTCGACAAG +
Preference number: 4 (lower is better)
Translates to: KLWAQPLSNKSWHGCTNTAEAAR*SRAFDK
Trigger: CTTGTCGAAAGCCCGGGAGCATCTGGCCGCTTCCGC...GGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR TCA 90 bp CACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATCTCCTTACCCCAGCCCATGGTTaGGGCGGAAGCGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: HSLLAINPGMAARTPNLLTPAHG*GGSGQM
Trigger: CATCTGGCCGCTTCCGCCTCAACCATGGGCTGGGGT...AAGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR CCA 90 bp AGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCACAAAACCCCAGCCCATaGTTGAGGCGGAAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: SCGHSLLAINPGMAARTPQNPSP*LRRKRP
Trigger: TGGCCGCTTCCGCCTCAACCATGGGCTGGGGTTTTG...TGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR CCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTGTGGCTGACAGGGCTTaGTTTCCAGCCTGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTVADRA*FPACKK
Trigger: CTTTTTACAGGCTGGAAACCAAGCCCTGTCAGCCAC...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR GCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTAAATCCTGGCATGGCTaGACGAACACCAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTKSWHG*TNTKSP
Trigger: AGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTT...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR GCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTCCTGAGCAAGCTCACTaGAAAGTTCTTGACATAGGC +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTPEQAH*KVLDIG
Trigger: GCCTATGTCAAGAACTTTGCAGTGAGCTTGCTCAGG...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTTCTTCAAAGTTCACTTaGAAAGGATCTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTSSKFT*KGSPGG
Trigger: GCCCCCAGGAGATCCTTTCCAAGTGAACTTTGAAGA...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp AGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATCTCCTTGCATTCGACAAGCCGCCCTaGAAAGCAGGCCCGTCATCT +
Preference number: 4 (lower is better)
Translates to: SLLAINPGMAARTPNLLAFDKPP*KAGPSS
Trigger: AGATGACGGGCCTGCTTTCCAGGGCGGCTTGTCGAA...TGCAAGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR TCA 90 bp AAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAGACTGATGCACCCTTaGGCCCTAAAGCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: KLWAQPLSNKSWHGCTNTRLMHP*ALKQTG
Trigger: TCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCT...GGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505975.5
CDS-3UTR TCA 90 bp TGTCAACCTCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAAGACCCCAGCCCATGGTTaGGGCGGAAGCGGCCAGATG +
Preference number: 4 (lower is better)
Translates to: CQPLWHMMFMLNRKVQLKTPAHG*GGSGQM
Trigger: CATCTGGCCGCTTCCGCCTCAACCATGGGCTGGGGT...CTTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGAGGTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505774.5
CDS-3UTR GCA 90 bp TACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACAACTCCCAGGAGGCTaGGCGAGCGACGGACCAACG +
Preference number: 4 (lower is better)
Translates to: YFVINPGLFVLVTAFCTPQLPGG*ASDGPT
Trigger: CGTTGGTCCGTCGCTCGCGCAGCCTCCTGGGAGTTG...TGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503479.6
CDS-3UTR GCA 90 bp AAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCTTGTATTTGGGGCAATaGCTGCACTGGCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: KLWAQPLSNKSWHGCTNTLYLGQ*LHWLSV
Trigger: CACTGACAGCCAGTGCAGGCATTGCCCCAAATACAA...GGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTCATTTCCATAAAATCTaGACCCCTTCGTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTHFHKI*TPSWLP
Trigger: TGGAAGCCACGAAGGGGTCCAGATTTTATGGAAATG...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp CAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATCTCCTTGCACAGCGGTGGTCTGGTaGAAAGAAAACCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: QPLSNKSWHGCTNTKSPCTAVVW*KENPWH
Trigger: GTGCCAAGGGTTTTCTTTCCACCAGACCACCGCTGT...GCAAGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR TCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTTTAGCTGTTGGCTGGTaGTTTGAGCTTTTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTLAVGW*FELFVA
Trigger: TGCAACAAAAAGCTCAAATCACCAGCCAACAGCTAA...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR TCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTAGACAGCATACTCATTaGTCCTACAGCAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTRQHTH*SYSNGF
Trigger: AAACCCATTGCTGTAGGATCAATGAGTATGCTGTCT...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR TCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTGGACAGGTAAGTATCTaGCAGTCATCTGAATTCTCT +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTGQVSI*QSSEFS
Trigger: AGAGAATTCAGATGACTGTCAGATACTTACCTGTCC...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR TCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTCACAGAAAACAAAAGTaGAGGCATAAGAGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTHRKQK*RHKREE
Trigger: TTCCTCCCTCTTATGCCTTCACTTTTGTTTTCTGTG...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR TCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTGATGGCATCCTTCTGTaGTTTGCTTCTTTTGCTCTA +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTDGILL*FASFAL
Trigger: TAGAGCAAAAGAAGCAAATCACAGAAGGATGCCATC...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTAAAGTAGTGGAGAGATaGATCGTTCATGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTKVVER*IVHAHS
Trigger: TGAGTGAGCATGAACGATCCATCTCTCCACTACTTT...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTAGCTACCAGTACTTCTaGAGCTTTCTTTGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTSYQYF*SFLWVD
Trigger: ATCAACCCAAAGAAAGCTCCAGAAGTACTGGTAGCT...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTTCATTATTCTGGTTCTaGGGACAGCAAAACACTTGC +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTSLFWF*GQQNTC
Trigger: GCAAGTGTTTTGCTGTCCCCAGAACCAGAATAATGA...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR TCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTTGTTGGCTGGTGATTTaGGCTTTTTGTTGCATCATA +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTCWLVI*AFCCII
Trigger: TATGATGCAACAAAAAGCTCAAATCACCAGCCAACA...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR TCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTCAAATGGAATCATGTTaGTGGCATCCTTCTGTGATT +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTQMESC*WHPSVI
Trigger: AATCACAGAAGGATGCCATCAACATGATTCCATTTG...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR GCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTGCATCCATGTCAATGTaGACTATGGTATTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTASMSM*TMVLLK
Trigger: TTTGAGCAATACCATAGTGCACATTGACATGGATGC...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR GCA 90 bp GCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATCTCCTAAATCCTGGCATGGCTaGACGAACACCAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: AQPLSNKSWHGCTNTKSPKSWHG*TNTKSP
Trigger: AGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTT...AGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR GCA 90 bp AGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATCTCCTTGCAATTTGGGGCAATGCCTaGACTGGCTGTCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: SLLAINPGMAARTPNLLAIWGNA*TGCQCC
Trigger: ACAACACTGACAGCCAGTGCAGGCATTGCCCCAAAT...TGCAAGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTTGTCAATGTGCACTATaGTATTGCTCAAATTTCGGC +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTCQCAL*YCSNFG
Trigger: GCCGAAATTTGAGCAATACCATAGTGCACATTGACA...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp TGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATCTCTTAGCAATAAATCCTaGCATGGCTGCACGAACACC +
Preference number: 4 (lower is better)
Translates to: WAQPLSNKSWHGCTNTKSLSNKS*HGCTNT
Trigger: GGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAG...AGATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR CCA 90 bp TCAGTTTTCTCTAATGTACACTCAGTGGCTGACAGGGCTTGGTTTCCAGCCTGTGTGGCTGACAGGGCTTaGTTTCCAGCCTGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: SVFSNVHSVADRAWFPACVADRA*FPACKK
Trigger: CTTTTTACAGGCTGGAAACCAAGCCCTGTCAGCCAC...ACAGGCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAGAGAAAACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp ATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGAGCCATCTGAGTAGCTaGGATTACAGGCGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: ILAFLFLLQPSVLHLSYQSHLSS*DYRRVP
Trigger: TGGCACACGCCTGTAATCCCAGCTACTCAGATGGCT...CTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514141.5
CDS-3UTR CCA 90 bp CTGTCAACCTCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAACAAAACCCCAGCCCATaGTTGAGGCGGAAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: LSTSLAYDVYAEQEGTTEQNPSP*LRRKRP
Trigger: TGGCCGCTTCCGCCTCAACCATGGGCTGGGGTTTTG...TTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGAGGTTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505774.5
CDS-3UTR CCA 90 bp TTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATTTACAGCGGTGGTCTaGTGGAAAGAAAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: LWAQPLSNKSWHGCTNTKFTAVV*WKENPW
Trigger: CCAAGGGTTTTCTTTCCACCAGACCACCGCTGTAAA...TTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR TCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTTGTTCCAAAAACAACTaGGTTTTGGAGTATTTGAGG +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTCSKNN*VLEYLR
Trigger: CCTCAAATACTCCAAAACTCAGTTGTTTTTGGAACA...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR TCA 90 bp ACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTGTACACTCAGTGGCTaGCAGGGCTTGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TLSSILAFLFLLQPSVLHCTLSG*QGLVSS
Trigger: GCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACA...GTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp GATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTGTACACTCAGTGGCTaGCAGGGCTTGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: DLKSFVLRYKQDKLELGLCTLSG*QGLVSS
Trigger: GCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACA...CAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTAACTTGGAATGGTTGTaGTGTCTGGAAACTTTGTTT +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTNLEWL*CLETLF
Trigger: AAACAAAGTTTCCAGACATCACAACCATTCCAAGTT...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR TCA 90 bp TTCCAGACTGATGCACCCTTGAGCCCTAAAGCAAACAGGACAGGTAAGTATCTGCTTCTGTACTCCACTTaGGCTACCAGTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: FQTDAPLSPKANRTGKYLLLYST*ATSTSG
Trigger: TCCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAG...CAGATACTTACCTGTCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp TATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACAACCTTTCCTATCTTTaGGGGGCAGGCATGGTTAAC +
Preference number: 4 (lower is better)
Translates to: YKLWAQPLSNKSWHGCTNNLSYL*GAGMVN
Trigger: GTTAACCATGCCTGCCCCTCAAAGATAGGAAAGGTT...GTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR GCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTCACACTTCTCCTTTGTaGTATCCATGGTATAAACTT +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTHTSPL*YPWYKL
Trigger: AAGTTTATACCATGGATAGCACAAAGGAGAAGTGTG...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR GCA 90 bp AGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATCTCCTTGCAAAATCCTGGCATGGCTaGACGAACACCAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: SLLAINPGMAARTPNLLAKSWHG*TNTKSP
Trigger: AGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTT...TGCAAGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR GCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTGAGATGGATCGTTCATaGTCACTCAGTTTATTAACT +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTEMDRS*SLSLLT
Trigger: AGTTAATAAACTGAGTGAGCATGAACGATCCATCTC...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR GCA 90 bp GATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGGGATCTCCTGGGGGCTaGACATCAGAAGGACTCTCT +
Preference number: 4 (lower is better)
Translates to: DLKSFVLRYKQDKLELGLGSPGG*TSEGLS
Trigger: AGAGAGTCCTTCTGATGTGCAGCCCCCAGGAGATCC...CAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp CTAGATATCCGAACACCCATAAGCCTTAATCTCAAGGGATGTGGAAAATCAGCAGGATCTCCTGGGGGCTaGACATCAGAAGGACTCTCT +
Preference number: 4 (lower is better)
Translates to: LDIRTPISLNLKGCGKSAGSPGG*TSEGLS
Trigger: AGAGAGTCCTTCTGATGTGCAGCCCCCAGGAGATCC...TGCTGATTTTCCACATCCCTTGAGATTAAGGCTTATGGGTGTTCGGATATCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp GGCACTATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTATTTGGGGCAATGCCTaGACTGGCTGTCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: GTIISCGHSLLAINPGMAIWGNA*TGCQCC
Trigger: ACAACACTGACAGCCAGTGCAGGCATTGCCCCAAAT...AGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR GCA 90 bp ATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTTGTATTTGGGGCAATaGCTGCACTGGCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: ILAFLFLLQPSVLHLSYQLYLGQ*LHWLSV
Trigger: CACTGACAGCCAGTGCAGGCATTGCCCCAAATACAA...CTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp TCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAAGATACTGTAGCGGAAGCGGCCAGATaGTCCCGGGCTTTCGACAAG +
Preference number: 4 (lower is better)
Translates to: SLAYDVYAEQEGTTEDTVAEAAR*SRAFDK
Trigger: CTTGTCGAAAGCCCGGGAGCATCTGGCCGCTTCCGC...TACAGTATCTTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505774.5
CDS-3UTR CCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTTCACAGCTTGTCTATTaGGAAGAATTTGGTATTGTC +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTSQLVY*EEFGIV
Trigger: GACAATACCAAATTCTTCCCAATAGACAAGCTGTGA...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp TCAGTTTTCTCTAATGTACACTCAGTGGCTGACAGGGCTTGGTTTCCAGCCTGTCTAATGTACACTCAGTaGCTGACAGGGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: SVFSNVHSVADRAWFPACLMYTQ*LTGLGF
Trigger: GAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAG...ACAGGCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAGAGAAAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp TGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATAGACAGCATACTCATTaGTCCTACAGCAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: CGHSLLAINPGMAARTPNRQHTH*SYSNGF
Trigger: AAACCCATTGCTGTAGGATCAATGAGTATGCTGTCT...ATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR TCA 90 bp GCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATCTCCTAGACAGCATACTCATTaGTCCTACAGCAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: AQPLSNKSWHGCTNTKSPRQHTH*SYSNGF
Trigger: AAACCCATTGCTGTAGGATCAATGAGTATGCTGTCT...AGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR TCA 90 bp AAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCCCTTGCATGGTAATTTaGAGTAGACAGCATACTCAT +
Preference number: 4 (lower is better)
Translates to: KLWAQPLSNKSWHGCTNTPCMVI*SRQHTH
Trigger: ATGAGTATGCTGTCTACTTCAAATTACCATGCAAGG...GGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR TCA 90 bp GGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATCTCCCTTGCATGGTAATTTaGAGTAGACAGCATACTCAT +
Preference number: 4 (lower is better)
Translates to: GHSLLAINPGMAARTPNLPCMVI*SRQHTH
Trigger: ATGAGTATGCTGTCTACTTCAAATTACCATGCAAGG...GAGATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR TCA 90 bp TTCCAGACTGATGCACCCTTGAGCCCTAAAGCAAACAGGACAGGTAAGTATCTGCATCCACATGCACATTaGACAGGGTTAGATCTGAAG +
Preference number: 4 (lower is better)
Translates to: FQTDAPLSPKANRTGKYLHPHAH*TGLDLK
Trigger: CTTCAGATCTAACCCTGTTCAATGTGCATGTGGATG...CAGATACTTACCTGTCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp TATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACCGAAGTGCGTGCTTGTaGGAAGGTACTAAGGAAATT +
Preference number: 4 (lower is better)
Translates to: YKLWAQPLSNKSWHGCTNRSACL*EGTKEI
Trigger: AATTTCCTTAGTACCTTCTCACAAGCACGCACTTCG...GTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR TCA 90 bp AGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAACGAGAGGAAATTACTaGAGCTACAAAGTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: SCGHSLLAINPGMAARTPTRGNY*SYKVKV
Trigger: GACTTTGACTTTGTAGCTTCAGTAATTTCCTCTCGT...TGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR GCA 90 bp ATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGAAATCCTGGCATGGCTaGACGAACACCAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: ILAFLFLLQPSVLHLSYQKSWHG*TNTKSP
Trigger: AGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTT...CTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp TGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACATGGATCTCCTGGGGGCTaGACATCAGAAGGACTCTCT +
Preference number: 4 (lower is better)
Translates to: CSTLQTGQTRAWPVFTSHGSPGG*TSEGLS
Trigger: AGAGAGTCCTTCTGATGTGCAGCCCCCAGGAGATCC...ATGTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp ATCTACATGTTTATTCAAGGCTTCCAGACTGATGCACCCTTGAGCCCTAAAGCAATTTGGGGCAATGCCTaGACTGGCTGTCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: IYMFIQGFQTDAPLSPKAIWGNA*TGCQCC
Trigger: ACAACACTGACAGCCAGTGCAGGCATTGCCCCAAAT...TGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAAGCCTTGAATAAACATGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp ATCTACATGTTTATTCAAGGCTTCCAGACTGATGCACCCTTGAGCCCTAAAGCATTGTATTTGGGGCAATaGCTGCACTGGCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: IYMFIQGFQTDAPLSPKALYLGQ*LHWLSV
Trigger: CACTGACAGCCAGTGCAGGCATTGCCCCAAATACAA...TGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAAGCCTTGAATAAACATGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp CAGAAGGACTCTCTTCAAAAAGTAGTGGAGAGATGGATCGTTCATGCTCACTCATTGTATTTGGGGCAATaGCTGCACTGGCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: QKDSLQKVVERWIVHAHSLYLGQ*LHWLSV
Trigger: CACTGACAGCCAGTGCAGGCATTGCCCCAAATACAA...TGAGTGAGCATGAACGATCCATCTCTCCACTACTTTTTGAAGAGAGTCCTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR GCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCCCCAGAAGCACCAGGTaGCACTCCCCAATCACACTG +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITPRSTR*HSPITL
Trigger: CAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGG...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR GCA 90 bp GGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATCTCAAAATAGCCTCCTATTaGCTAATCCCTTGTACACAC +
Preference number: 4 (lower is better)
Translates to: GHSLLAINPGMAARTPNLKIASY*LIPCTH
Trigger: GTGTGTACAAGGGATTAGGCAATAGGAGGCTATTTT...GAGATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR GCA 90 bp TTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAAGAAGAAAAATCTTGTTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LWAQPLSNKSWHGCTNTKEEKSC*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGGCAACAAGATTTTTCTTC...TTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR CCA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTTTTATCCTTCAATTCTaGATTGTCCCTCATTTCTAC +
Preference number: 4 (lower is better)
Translates to: IASIPEAPGATPQSHCCTFILQF*IVPHFY
Trigger: GTAGAAATGAGGGACAATCCAGAATTGAAGGATAAA...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp GGCACTATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTCTTAGCAATAAATCCTaGCATGGCTGCACGAACACC +
Preference number: 4 (lower is better)
Translates to: GTIISCGHSLLAINPGMALSNKS*HGCTNT
Trigger: GGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAG...AGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR CCA 90 bp AAAGTTCACTTGGAAAGGATCTCCTGGGGGCTGCACATCAGAAGGACTCTCTTCAAAGTAGTGGAGAGATaGATCGTTCATGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: KVHLERISWGLHIRRTLFKVVER*IVHAHS
Trigger: TGAGTGAGCATGAACGATCCATCTCTCCACTACTTT...GAAGAGAGTCCTTCTGATGTGCAGCCCCCAGGAGATCCTTTCCAAGTGAACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CCA 90 bp ATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGATCTTCAAAGTTCACTTaGAAAGGATCTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: IISCGHSLLAINPGMAARSSKFT*KGSPGG
Trigger: GCCCCCAGGAGATCCTTTCCAAGTGAACTTTGAAGA...TCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CCA 90 bp ATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTCTTCAAAGTTCACTTaGAAAGGATCTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: ILAFLFLLQPSVLHLSYQSSKFT*KGSPGG
Trigger: GCCCCCAGGAGATCCTTTCCAAGTGAACTTTGAAGA...CTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp GGCACTATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTTCTTCAAAGTTCACTTaGAAAGGATCTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GTIISCGHSLLAINPGMASSKFT*KGSPGG
Trigger: GCCCCCAGGAGATCCTTTCCAAGTGAACTTTGAAGA...AGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CCA 90 bp ACTATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCAGTGGCTGACAGGGCTTaGTTTCCAGCCTGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: TIISCGHSLLAINPGMAAVADRA*FPACKK
Trigger: CTTTTTACAGGCTGGAAACCAAGCCCTGTCAGCCAC...TGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505975.5
CDS-3UTR CCA 90 bp GCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCGTGGCTGACAGGGCTTaGTTTCCAGCCTGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: AFLFLLQPSVLHLSYQYFVADRA*FPACKK
Trigger: CTTTTTACAGGCTGGAAACCAAGCCCTGTCAGCCAC...GAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp ATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGCTAATGTACACTCAGTaGCTGACAGGGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: ILAFLFLLQPSVLHLSYQLMYTQ*LTGLGF
Trigger: GAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAG...CTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp TTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAAGATACTGTAGCATTCGACAAGCCGCCCTaGAAAGCAGGCCCGTCATCT +
Preference number: 4 (lower is better)
Translates to: LAYDVYAEQEGTTEDTVAFDKPP*KAGPSS
Trigger: AGATGACGGGCCTGCTTTCCAGGGCGGCTTGTCGAA...TGCTACAGTATCTTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505774.5
CDS-3UTR TCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCTGTACACTCAGTGGCTaGCAGGGCTTGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITCTLSG*QGLVSS
Trigger: GCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACA...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR TCA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTTGTACACTCAGTGGCTaGCAGGGCTTGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELCTLSG*QGLVSS
Trigger: GCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACA...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp CTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTAGACTGATGCACCCTTaGGCCCTAAAGCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: LCHQSWPFCSCYSLLYSTRLMHP*ALKQTG
Trigger: TCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCT...AGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp GACAGGGCTTGGTTTCCAGCCTGTAAAAAGCCAATAATGCTCCTTTGTTGGTGTCATCCACATGCACATTaGACAGGGTTAGATCTGAAG +
Preference number: 4 (lower is better)
Translates to: DRAWFPACKKPIMLLCWCHPHAH*TGLDLK
Trigger: CTTCAGATCTAACCCTGTTCAATGTGCATGTGGATG...ACACCAACAAAGGAGCATTATTGGCTTTTTACAGGCTGGAAACCAAGCCCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp TTAAAACTTGGAATGGTTGTGATGTCTGGAAACTTTGTTTATTCACGGCTTCACCCTGCCTCAGCCATCTaGGTAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: LKLGMVVMSGNFVYSRLHPASAI*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGATGGCTGAGGCAGG...GTGAAGCCGTGAATAAACAAAGTTTCCAGACATCACAACCATTCCAAGTTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514141.5
CDS-3UTR TCA 90 bp TGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATCTACAGGAAGGTACAACTaGAGATACTGTAGCATAATG +
Preference number: 4 (lower is better)
Translates to: WAQPLSNKSWHGCTNTKSTGRYN*RYCSIM
Trigger: CATTATGCTACAGTATCTTCAGTTGTACCTTCCTGT...AGATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR GCA 90 bp GGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATCTCTGTGCACTATGGTATTaGTCAAATTTCGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: GHSLLAINPGMAARTPNLCALWY*SNFGFV
Trigger: AACAAAGCCGAAATTTGAGCAATACCATAGTGCACA...GAGATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR GCA 90 bp CAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATCTCCTTGCGCATCCATGTCAATGTaGACTATGGTATTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: QPLSNKSWHGCTNTKSPCASMSM*TMVLLK
Trigger: TTTGAGCAATACCATAGTGCACATTGACATGGATGC...GCAAGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR GCA 90 bp TATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACCCTCATTTCTACAGCTaGATAGAAAGCATCCATGTC +
Preference number: 4 (lower is better)
Translates to: YKLWAQPLSNKSWHGCTNPHFYS*IESIHV
Trigger: GACATGGATGCTTTCTATGCAGCTGTAGAAATGAGG...GTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR GCA 90 bp TCAGTTTTCTCTAATGTACACTCAGTGGCTGACAGGGCTTGGTTTCCAGCCTGTCCTCATTTCTACAGCTaGATAGAAAGCATCCATGTC +
Preference number: 4 (lower is better)
Translates to: SVFSNVHSVADRAWFPACPHFYS*IESIHV
Trigger: GACATGGATGCTTTCTATGCAGCTGTAGAAATGAGG...ACAGGCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAGAGAAAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCGGATCTCCTGGGGGCTaGACATCAGAAGGACTCTCT +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITGSPGG*TSEGLS
Trigger: AGAGAGTCCTTCTGATGTGCAGCCCCCAGGAGATCC...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR GCA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGATCTCCTGGGGGCTaGACATCAGAAGGACTCTCT +
Preference number: 4 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELGSPGG*TSEGLS
Trigger: AGAGAGTCCTTCTGATGTGCAGCCCCCAGGAGATCC...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp AGAAAGCATCCATGTCAATGTGCACTATGGTATTGCTCAAATTTCGGCTTTGTTGGATCTCCTGGGGGCTaGACATCAGAAGGACTCTCT +
Preference number: 4 (lower is better)
Translates to: RKHPCQCALWYCSNFGFVGSPGG*TSEGLS
Trigger: AGAGAGTCCTTCTGATGTGCAGCCCCCAGGAGATCC...AACAAAGCCGAAATTTGAGCAATACCATAGTGCACATTGACATGGATGCTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR GCA 90 bp ACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGTATTTGGGGCAATaGCTGCACTGGCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: TLSSILAFLFLLQPSVLHLYLGQ*LHWLSV
Trigger: CACTGACAGCCAGTGCAGGCATTGCCCCAAATACAA...GTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR GCA 90 bp CTCCATCCCTCGTCAGGTGTGTTGAACCTAGACCCAAGGAGATATGAAGGAAATAAGGAGAGAAAGCAATaGCCTCTGTTGGTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: LHPSSGVLNLDPRRYEGNKERKQ*PLLVKF
Trigger: GAACTTTACCAACAGAGGGCATTGCTTTCTCTCCTT...ATTTCCTTCATATCTCCTTGGGTCTAGGTTCAACACACCTGACGAGGGATGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR GCA 90 bp CATCAGAAGGACTCTCTTCAAAAAGTAGTGGAGAGATGGATCGTTCATGCTCACCCTGAGCAAGCTCACTaGAAAGTTCTTGACATAGGC +
Preference number: 4 (lower is better)
Translates to: HQKDSLQKVVERWIVHAHPEQAH*KVLDIG
Trigger: GCCTATGTCAAGAACTTTGCAGTGAGCTTGCTCAGG...GTGAGCATGAACGATCCATCTCTCCACTACTTTTTGAAGAGAGTCCTTCTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CCA 90 bp AATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCACTTAGCAATAAATCCTaGCATGGCTGCACGAACACC +
Preference number: 4 (lower is better)
Translates to: NPGLFVLVTAFCTPLELPLSNKS*HGCTNT
Trigger: GGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAG...TGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp AATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCACTAATGTACACTCAGTaGCTGACAGGGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: NPGLFVLVTAFCTPLELPLMYTQ*LTGLGF
Trigger: GAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAG...TGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp TTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCTGGCATCAGTCATGGGATTaGATTGGCATGCTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: FLFLLQPSVLHLSYQYFWHQSWD*IGMLAG
Trigger: GCCTGCTAGCATGCCAATCCAATCCCATGACTGATG...CCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514141.5
CDS-3UTR CCA 90 bp ACTATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAGATTTACAGCGGTaGTCTGGTGGAAAGAAAACC +
Preference number: 4 (lower is better)
Translates to: TIISCGHSLLAINPGMAARDLQR*SGGKKT
Trigger: GGTTTTCTTTCCACCAGACCACCGCTGTAAATCTCG...TGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR CCA 90 bp ACTATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCATTTGAGGGGCAGGCATaGTTAACGTGGTTCTCAGTA +
Preference number: 4 (lower is better)
Translates to: TIISCGHSLLAINPGMAAFEGQA*LTWFSV
Trigger: TACTGAGAACCACGTTAACCATGCCTGCCCCTCAAA...TGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR TCA 90 bp TCAGTTTTCTCTAATGTACACTCAGTGGCTGACAGGGCTTGGTTTCCAGCCTGTTGTTGGCTGGTGATTTaGGCTTTTTGTTGCATCATA +
Preference number: 4 (lower is better)
Translates to: SVFSNVHSVADRAWFPACCWLVI*AFCCII
Trigger: TATGATGCAACAAAAAGCTCAAATCACCAGCCAACA...ACAGGCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAGAGAAAACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp GACAGGGCTTGGTTTCCAGCCTGTAAAAAGCCAATAATGCTCCTTTGTTGGTGTTTAGCTGTTGGCTGGTaGTTTGAGCTTTTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: DRAWFPACKKPIMLLCWCLAVGW*FELFVA
Trigger: TGCAACAAAAAGCTCAAATCACCAGCCAACAGCTAA...ACACCAACAAAGGAGCATTATTGGCTTTTTACAGGCTGGAAACCAAGCCCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp CACTATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCTTAGCTGTTGGCTGGTaGTTTGAGCTTTTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: HYYKLWAQPLSNKSWHGCLAVGW*FELFVA
Trigger: TGCAACAAAAAGCTCAAATCACCAGCCAACAGCTAA...GCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR TCA 90 bp CAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATCTCCTTGCTGTTCCAAAAACAACTaGGTTTTGGAGTATTTGAGG +
Preference number: 4 (lower is better)
Translates to: QPLSNKSWHGCTNTKSPCCSKNN*VLEYLR
Trigger: CCTCAAATACTCCAAAACTCAGTTGTTTTTGGAACA...GCAAGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR TCA 90 bp TTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATGTTCCAAAAACAACTaGGTTTTGGAGTATTTGAGG +
Preference number: 4 (lower is better)
Translates to: LWAQPLSNKSWHGCTNTKCSKNN*VLEYLR
Trigger: CCTCAAATACTCCAAAACTCAGTTGTTTTTGGAACA...TTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR TCA 90 bp ATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTCACTGCAAAGTTCTTaGCATAGGCTGTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: ILAFLFLLQPSVLHLSYQSLQSS*HRLYCS
Trigger: AGAGCAATACAGCCTATGTCAAGAACTTTGCAGTGA...CTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
CDS-3UTR TCA 90 bp TGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACATAGACTGATGCACCCTTaGGCCCTAAAGCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: CSTLQTGQTRAWPVFTSHRLMHP*ALKQTG
Trigger: TCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCT...ATGTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp TGTTTCCTGTCCTCTTCATTGGGAAAACTAGATATCCGAACACCCATAAGCCTTCTTCTGTACTCCACTTaGGCTACCAGTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: CFLSSSLGKLDIRTPISLLLYST*ATSTSG
Trigger: TCCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAG...AAGGCTTATGGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCTTTCTCCGCTCCTCCTaGTTTTCTACCCGTCGTCAC +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITFLRSS*FSTRRH
Trigger: GTGACGACGGGTAGAAAAGCAGGAGGAGCGGAGAAA...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR GCA 90 bp AGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATCTCCTTGCAGCATCCATGTCAATGTaGACTATGGTATTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: SLLAINPGMAARTPNLLAASMSM*TMVLLK
Trigger: TTTGAGCAATACCATAGTGCACATTGACATGGATGC...TGCAAGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR GCA 90 bp CTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTAAATCCTGGCATGGCTaGACGAACACCAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: LCHQSWPFCSCYSLLYSTKSWHG*TNTKSP
Trigger: AGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTT...AGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR GCA 90 bp CTGTCCTCTTCATTGGGAAAACTAGATATCCGAACACCCATAAGCCTTAATCTCAAATCCTGGCATGGCTaGACGAACACCAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: LSSSLGKLDIRTPISLNLKSWHG*TNTKSP
Trigger: AGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTT...GAGATTAAGGCTTATGGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp TGGCGGTATTCTTGTCTAAATGATCCAACATCTTCGTTTTCCAATGAAACAGTAGGATCTCCTGGGGGCTaGACATCAGAAGGACTCTCT +
Preference number: 4 (lower is better)
Translates to: WRYSCLNDPTSSFSNETVGSPGG*TSEGLS
Trigger: AGAGAGTCCTTCTGATGTGCAGCCCCCAGGAGATCC...TACTGTTTCATTGGAAAACGAAGATGTTGGATCATTTAGACAAGAATACCGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp TTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACATTTGGGGCAATGCCTaGACTGGCTGTCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: FVLRYKQDKLELGLFSLHIWGNA*TGCQCC
Trigger: ACAACACTGACAGCCAGTGCAGGCATTGCCCCAAAT...GTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp GATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGCCTGAGCAAGCTCACTaGAAAGTTCTTGACATAGGC +
Preference number: 4 (lower is better)
Translates to: DLKSFVLRYKQDKLELGLPEQAH*KVLDIG
Trigger: GCCTATGTCAAGAACTTTGCAGTGAGCTTGCTCAGG...CAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
CDS-3UTR GCA 90 bp CTGAAACGAATTTCCTTTACCACTTCCTGGGCTGATGTTCCAAAAACAACTGAGCCTGAGCAAGCTCACTaGAAAGTTCTTGACATAGGC +
Preference number: 4 (lower is better)
Translates to: LKRISFTTSWADVPKTTEPEQAH*KVLDIG
Trigger: GCCTATGTCAAGAACTTTGCAGTGAGCTTGCTCAGG...CTCAGTTGTTTTTGGAACATCAGCCCAGGAAGTGGTAAAGGAAATTCGTTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR GCA 90 bp TATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGTCTAAAAATGCGAAGTaGGTGCTTGTGAGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: YYKLWAQPLSNKSWHGCTSKNAK*VLVRRY
Trigger: GTACCTTCTCACAAGCACGCACTTCGCATTTTTAGA...CGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR CCA 90 bp TGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATTTGATCCTACAGCAATaGGTTTATCCTTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: CGHSLLAINPGMAARTPNLILQQ*VYPSIL
Trigger: CAGAATTGAAGGATAAACCCATTGCTGTAGGATCAA...ATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR CCA 90 bp TGTTTCCTGTCCTCTTCATTGGGAAAACTAGATATCCGAACACCCATAAGCCTTTCTTCAAAGTTCACTTaGAAAGGATCTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: CFLSSSLGKLDIRTPISLSSKFT*KGSPGG
Trigger: GCCCCCAGGAGATCCTTTCCAAGTGAACTTTGAAGA...AAGGCTTATGGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp CTAGATATCCGAACACCCATAAGCCTTAATCTCAAGGGATGTGGAAAATCAGCATCTTCAAAGTTCACTTaGAAAGGATCTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LDIRTPISLNLKGCGKSASSKFT*KGSPGG
Trigger: GCCCCCAGGAGATCCTTTCCAAGTGAACTTTGAAGA...TGCTGATTTTCCACATCCCTTGAGATTAAGGCTTATGGGTGTTCGGATATCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp GACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCAAGGGTCTCACCATGTTaGCGAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: DLLGRLEHSSLLCLLLKARVSPC*RGWSQT
Trigger: AGTTTGAGACCAGCCTCGCCAACATGGTGAGACCCT...TGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514141.5
CDS-3UTR CCA 90 bp TTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAAATCTGTCAACCTCTTTaGCATATGATGTTTATGCTG +
Preference number: 4 (lower is better)
Translates to: LWAQPLSNKSWHGCTNTKICQPL*HMMFML
Trigger: CAGCATAAACATCATATGCCAAAGAGGTTGACAGAT...TTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CCA 90 bp TGTCAACCTCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAAGATAGCGGTGGTCTGGTaGAAAGAAAACCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: CQPLWHMMFMLNRKVQLKIAVVW*KENPWH
Trigger: GTGCCAAGGGTTTTCTTTCCACCAGACCACCGCTAT...CTTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGAGGTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505774.5
3UTR CAA 72 bp TACATGTTTATTCAAGGCTTCCAGACTGATGCACCCTaGAGCCCTAAAGCAAACAGGACAGGTAAGTATCTG +
Preference number: 4 (lower is better)
Translates to: YMFIQGFQTDAP*SPKANRTGKYL
Trigger: CAGATACTTACCTGTCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAAGCCTTGAATAAACATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp CTTTGTTGGTGTTTCCTGTCCTCTTCATTGGGAAAACTAGATATCCGAACACCCAGACAGCATACTCATTaGTCCTACAGCAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: LCWCFLSSSLGKLDIRTPRQHTH*SYSNGF
Trigger: AAACCCATTGCTGTAGGATCAATGAGTATGCTGTCT...GGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAAACACCAACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp TTCCAGACTGATGCACCCTTGAGCCCTAAAGCAAACAGGACAGGTAAGTATCTGTGTTCCAAAAACAACTaGGTTTTGGAGTATTTGAGG +
Preference number: 4 (lower is better)
Translates to: FQTDAPLSPKANRTGKYLCSKNN*VLEYLR
Trigger: CCTCAAATACTCCAAAACTCAGTTGTTTTTGGAACA...CAGATACTTACCTGTCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp TTAAAAGACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTTGTACACTCAGTGGCTaGCAGGGCTTGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LKDLLGRLEHSSLLCLLLCTLSG*QGLVSS
Trigger: GCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACA...AAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp TTCAATATTAAAAGACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTTGTACACTCAGTGGCTaGCAGGGCTTGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: FNIKRLAWETRTFFLAMLCTLSG*QGLVSS
Trigger: GCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACA...AAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAATATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCAGACTGATGCACCCTTaGGCCCTAAAGCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITRLMHP*ALKQTG
Trigger: TCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCT...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR TCA 90 bp GACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCAAGACTGATGCACCCTTaGGCCCTAAAGCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: DLLGRLEHSSLLCLLLKARLMHP*ALKQTG
Trigger: TCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCT...TGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp CTAGATATCCGAACACCCATAAGCCTTAATCTCAAGGGATGTGGAAAATCAGCACATCCACATGCACATTaGACAGGGTTAGATCTGAAG +
Preference number: 4 (lower is better)
Translates to: LDIRTPISLNLKGCGKSAHPHAH*TGLDLK
Trigger: CTTCAGATCTAACCCTGTTCAATGTGCATGTGGATG...TGCTGATTTTCCACATCCCTTGAGATTAAGGCTTATGGGTGTTCGGATATCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp CTGTCCTCTTCATTGGGAAAACTAGATATCCGAACACCCATAAGCCTTAATCTCCATCCACATGCACATTaGACAGGGTTAGATCTGAAG +
Preference number: 4 (lower is better)
Translates to: LSSSLGKLDIRTPISLNLHPHAH*TGLDLK
Trigger: CTTCAGATCTAACCCTGTTCAATGTGCATGTGGATG...GAGATTAAGGCTTATGGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp TTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACCTTCTGTACTCCACTTaGGCTACCAGTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: FVLRYKQDKLELGLFSLHLLYST*ATSTSG
Trigger: TCCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAG...GTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp ATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGACTCAAAGTAAAGGGATaGAGAAAAATCTTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: IISCGHSLLAINPGMAARLKVKG*RKILLP
Trigger: GGGCAACAAGATTTTTCTTCATCCCTTTACTTTGAG...TCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR GCA 90 bp TTCCAGACTGATGCACCCTTGAGCCCTAAAGCAAACAGGACAGGTAAGTATCTGTGTGCACTATGGTATTaGTCAAATTTCGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: FQTDAPLSPKANRTGKYLCALWY*SNFGFV
Trigger: AACAAAGCCGAAATTTGAGCAATACCATAGTGCACA...CAGATACTTACCTGTCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp CAGAAGGACTCTCTTCAAAAAGTAGTGGAGAGATGGATCGTTCATGCTCACTCACCTCATTTCTACAGCTaGATAGAAAGCATCCATGTC +
Preference number: 4 (lower is better)
Translates to: QKDSLQKVVERWIVHAHSPHFYS*IESIHV
Trigger: GACATGGATGCTTTCTATGCAGCTGTAGAAATGAGG...TGAGTGAGCATGAACGATCCATCTCTCCACTACTTTTTGAAGAGAGTCCTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR GCA 90 bp ACTATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACCTCATTTCTACAGCTaGATAGAAAGCATCCATGTC +
Preference number: 4 (lower is better)
Translates to: TIISCGHSLLAINPGMAAPHFYS*IESIHV
Trigger: GACATGGATGCTTTCTATGCAGCTGTAGAAATGAGG...TGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR GCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCATTTGGGGCAATGCCTaGACTGGCTGTCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITIWGNA*TGCQCC
Trigger: ACAACACTGACAGCCAGTGCAGGCATTGCCCCAAAT...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR GCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCTTGTATTTGGGGCAATaGCTGCACTGGCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITLYLGQ*LHWLSV
Trigger: CACTGACAGCCAGTGCAGGCATTGCCCCAAATACAA...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR GCA 90 bp GACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCATTGTATTTGGGGCAATaGCTGCACTGGCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: DLLGRLEHSSLLCLLLKALYLGQ*LHWLSV
Trigger: CACTGACAGCCAGTGCAGGCATTGCCCCAAATACAA...TGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp TGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACATCCTGAGCAAGCTCACTaGAAAGTTCTTGACATAGGC +
Preference number: 4 (lower is better)
Translates to: CSTLQTGQTRAWPVFTSHPEQAH*KVLDIG
Trigger: GCCTATGTCAAGAACTTTGCAGTGAGCTTGCTCAGG...ATGTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
CDS-3UTR GCA 90 bp GACAGGGCTTGGTTTCCAGCCTGTAAAAAGCCAATAATGCTCCTTTGTTGGTGTAAGCAAACATCCACATaGACATTGAACAGGGTTAGA +
Preference number: 4 (lower is better)
Translates to: DRAWFPACKKPIMLLCWCKQTST*TLNRVR
Trigger: TCTAACCCTGTTCAATGTGCATGTGGATGTTTGCTT...ACACCAACAAAGGAGCATTATTGGCTTTTTACAGGCTGGAAACCAAGCCCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp GCTGTATTGCTCTTCCGCTTTATTTATCTCACTGAATGTCCTCTCAACGCTCATCATTTCCATAAAATCTaGACCCCTTCGTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: AVLLFRFIYLTECPLNAHHFHKI*TPSWLP
Trigger: TGGAAGCCACGAAGGGGTCCAGATTTTATGGAAATG...ATGAGCGTTGAGAGGACATTCAGTGAGATAAATAAAGCGGAAGAGCAATACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CCA 90 bp ATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTGTCAATGTGCACTATaGTATTGCTCAAATTTCGGC +
Preference number: 4 (lower is better)
Translates to: ILAFLFLLQPSVLHLSYQCQCAL*YCSNFG
Trigger: GCCGAAATTTGAGCAATACCATAGTGCACATTGACA...CTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp TATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGTGTCAATGTGCACTATaGTATTGCTCAAATTTCGGC +
Preference number: 4 (lower is better)
Translates to: YYKLWAQPLSNKSWHGCTCQCAL*YCSNFG
Trigger: GCCGAAATTTGAGCAATACCATAGTGCACATTGACA...CGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR CCA 90 bp CTGTCAACCTCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAACTTAGCAATAAATCCTaGCATGGCTGCACGAACACC +
Preference number: 4 (lower is better)
Translates to: LSTSLAYDVYAEQEGTTELSNKS*HGCTNT
Trigger: GGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAG...TTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGAGGTTGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CCA 90 bp GACAGGGCTTGGTTTCCAGCCTGTAAAAAGCCAATAATGCTCCTTTGTTGGTGTCACTATTATAAGTTGTaGGCACAGCCTCTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: DRAWFPACKKPIMLLCWCHYYKL*AQPLSN
Trigger: ATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTG...ACACCAACAAAGGAGCATTATTGGCTTTTTACAGGCTGGAAACCAAGCCCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp AATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCATCCTTTACCACTTCCTaGGCTGATGTTCCAAAAACA +
Preference number: 4 (lower is better)
Translates to: NPGLFVLVTAFCTPLELPSFTTS*ADVPKT
Trigger: TGTTTTTGGAACATCAGCCCAGGAAGTGGTAAAGGA...TGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp TCAGTTTTCTCTAATGTACACTCAGTGGCTGACAGGGCTTGGTTTCCAGCCTGTTCACAGCTTGTCTATTaGGAAGAATTTGGTATTGTC +
Preference number: 4 (lower is better)
Translates to: SVFSNVHSVADRAWFPACSQLVY*EEFGIV
Trigger: GACAATACCAAATTCTTCCCAATAGACAAGCTGTGA...ACAGGCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAGAGAAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGTGGCTGACAGGGCTTaGTTTCCAGCCTGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELVADRA*FPACKK
Trigger: CTTTTTACAGGCTGGAAACCAAGCCCTGTCAGCCAC...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp AATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAAGCTACCAGTACTTCTaGAGCTTTCTTTGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: NPGLFVLVTAFCTPLELPSYQYF*SFLWVD
Trigger: ATCAACCCAAAGAAAGCTCCAGAAGTACTGGTAGCT...TGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCTCTCGCTCTTCAGGCTaGAGTACAGTGGCAAGATCT +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITSRSSG*STVARS
Trigger: AGATCTTGCCACTGTACTCCAGCCTGAAGAGCGAGA...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp CTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTCATTTCCATAAAATCTaGACCCCCGTTACCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LCHQSWPFCSCYSLLYSTHFHKI*TPVTSG
Trigger: TCCTGAGGTAACGGGGGTCCAGATTTTATGGAAATG...AGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000503479.6
ENST00000510815.6
CDS-3UTR CCA 90 bp GGCACTATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTCAGGCATGGTTAACGTaGTTCTCAGTAAGATATTCA +
Preference number: 4 (lower is better)
Translates to: GTIISCGHSLLAINPGMAQAWLT*FSVRYS
Trigger: TGAATATCTTACTGAGAACCACGTTAACCATGCCTG...AGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR TCA 90 bp GATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTAGCTGTTGGCTGGTaGTTTGAGCTTTTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: DLKSFVLRYKQDKLELGLLAVGW*FELFVA
Trigger: TGCAACAAAAAGCTCAAATCACCAGCCAACAGCTAA...CAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp ACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACAGACAGCATACTCATTaGTCCTACAGCAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: TLSSILAFLFLLQPSVLHRQHTH*SYSNGF
Trigger: AAACCCATTGCTGTAGGATCAATGAGTATGCTGTCT...GTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR TCA 90 bp CTGTCCTCTTCATTGGGAAAACTAGATATCCGAACACCCATAAGCCTTAATCTCTCACTGCAAAGTTCTTaGCATAGGCTGTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: LSSSLGKLDIRTPISLNLSLQSS*HRLYCS
Trigger: AGAGCAATACAGCCTATGTCAAGAACTTTGCAGTGA...GAGATTAAGGCTTATGGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
CDS-3UTR TCA 90 bp ATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGAACTTGGAATGGTTGTaGTGTCTGGAAACTTTGTTT +
Preference number: 4 (lower is better)
Translates to: ILAFLFLLQPSVLHLSYQNLEWL*CLETLF
Trigger: AAACAAAGTTTCCAGACATCACAACCATTCCAAGTT...CTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp CTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTGGACAGGTAAGTATCTaGCAGTCATCTGAATTCTCT +
Preference number: 4 (lower is better)
Translates to: LCHQSWPFCSCYSLLYSTGQVSI*QSSEFS
Trigger: AGAGAATTCAGATGACTGTCAGATACTTACCTGTCC...AGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCCTTCTGTACTCCACTTaGGCTACCAGTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITLLYST*ATSTSG
Trigger: TCCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAG...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR GCA 90 bp CACTATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCTGTGCACTATGGTATTaGTCAAATTTCGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: HYYKLWAQPLSNKSWHGCCALWY*SNFGFV
Trigger: AACAAAGCCGAAATTTGAGCAATACCATAGTGCACA...GCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR GCA 90 bp CTAGATATCCGAACACCCATAAGCCTTAATCTCAAGGGATGTGGAAAATCAGCACCTCATTTCTACAGCTaGATAGAAAGCATCCATGTC +
Preference number: 4 (lower is better)
Translates to: LDIRTPISLNLKGCGKSAPHFYS*IESIHV
Trigger: GACATGGATGCTTTCTATGCAGCTGTAGAAATGAGG...TGCTGATTTTCCACATCCCTTGAGATTAAGGCTTATGGGTGTTCGGATATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp AGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATCTCCTTGCAGTCAGTGTTGTTTTCTaGTCAATTCTGAAACGAATT +
Preference number: 4 (lower is better)
Translates to: SLLAINPGMAARTPNLLAVSVVF*SILKRI
Trigger: AATTCGTTTCAGAATTGAGCAGAAAACAACACTGAC...TGCAAGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR GCA 90 bp ACATTGAACAGGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAATTTGGGGCAATGCCTaGACTGGCTGTCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: TLNRVRSEVFCSTLQTGQIWGNA*TGCQCC
Trigger: ACAACACTGACAGCCAGTGCAGGCATTGCCCCAAAT...TTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCCTGTTCAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp CTGTCCTCTTCATTGGGAAAACTAGATATCCGAACACCCATAAGCCTTAATCTCAAGGAGAGAAAGCAATaGCCTCTGTTGGTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: LSSSLGKLDIRTPISLNLKERKQ*PLLVKF
Trigger: GAACTTTACCAACAGAGGGCATTGCTTTCTCTCCTT...GAGATTAAGGCTTATGGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp CTAGATATCCGAACACCCATAAGCCTTAATCTCAAGGGATGTGGAAAATCAGCAAAGGAGAGAAAGCAATaGCCTCTGTTGGTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: LDIRTPISLNLKGCGKSAKERKQ*PLLVKF
Trigger: GAACTTTACCAACAGAGGGCATTGCTTTCTCTCCTT...TGCTGATTTTCCACATCCCTTGAGATTAAGGCTTATGGGTGTTCGGATATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp GATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGAAGGAGAGAAAGCAATaGCCTCTGTTGGTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: DLKSFVLRYKQDKLELGLKERKQ*PLLVKF
Trigger: GAACTTTACCAACAGAGGGCATTGCTTTCTCTCCTT...CAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp TTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCTGGAAGGAGAGAAAGCAATaGCCTCTGTTGGTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: FLFLLQPSVLHLSYQYFWKERKQ*PLLVKF
Trigger: GAACTTTACCAACAGAGGGCATTGCTTTCTCTCCTT...CCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp AATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAAAGCAAACATCCACATaGACATTGAACAGGGTTAGA +
Preference number: 4 (lower is better)
Translates to: NPGLFVLVTAFCTPLELPKQTST*TLNRVR
Trigger: TCTAACCCTGTTCAATGTGCATGTGGATGTTTGCTT...TGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp CTGTCAACCTCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAACATTTCCATAAAATCTaGACCCCTTCGTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LSTSLAYDVYAEQEGTTEHFHKI*TPSWLP
Trigger: TGGAAGCCACGAAGGGGTCCAGATTTTATGGAAATG...TTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGAGGTTGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505774.5
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CCA 90 bp TACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACATTTCCATAAAATCTaGACCCCTTCGTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: YFVINPGLFVLVTAFCTPHFHKI*TPSWLP
Trigger: TGGAAGCCACGAAGGGGTCCAGATTTTATGGAAATG...TGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000505975.5
ENST00000509126.2
ENST00000511527.5
ENST00000514141.5
CDS-3UTR CCA 90 bp ACTATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCATGTCAATGTGCACTATaGTATTGCTCAAATTTCGGC +
Preference number: 4 (lower is better)
Translates to: TIISCGHSLLAINPGMAACQCAL*YCSNFG
Trigger: GCCGAAATTTGAGCAATACCATAGTGCACATTGACA...TGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR CCA 90 bp TATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACTTTATCCTTCAATTCTaGATTGTCCCTCATTTCTAC +
Preference number: 4 (lower is better)
Translates to: YKLWAQPLSNKSWHGCTNFILQF*IVPHFY
Trigger: GTAGAAATGAGGGACAATCCAGAATTGAAGGATAAA...GTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR CCA 90 bp TCAGTTTTCTCTAATGTACACTCAGTGGCTGACAGGGCTTGGTTTCCAGCCTGTTTTATCCTTCAATTCTaGATTGTCCCTCATTTCTAC +
Preference number: 4 (lower is better)
Translates to: SVFSNVHSVADRAWFPACFILQF*IVPHFY
Trigger: GTAGAAATGAGGGACAATCCAGAATTGAAGGATAAA...ACAGGCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAGAGAAAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp ATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACATTTATCCTTCAATTCTaGATTGTCCCTCATTTCTAC +
Preference number: 4 (lower is better)
Translates to: ISCGHSLLAINPGMAARTFILQF*IVPHFY
Trigger: GTAGAAATGAGGGACAATCCAGAATTGAAGGATAAA...TGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR CCA 90 bp GACAGGGCTTGGTTTCCAGCCTGTAAAAAGCCAATAATGCTCCTTTGTTGGTGTTTGATCCTACAGCAATaGGTTTATCCTTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: DRAWFPACKKPIMLLCWCLILQQ*VYPSIL
Trigger: CAGAATTGAAGGATAAACCCATTGCTGTAGGATCAA...ACACCAACAAAGGAGCATTATTGGCTTTTTACAGGCTGGAAACCAAGCCCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp ATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGATTGATCCTACAGCAATaGGTTTATCCTTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: IISCGHSLLAINPGMAARLILQQ*VYPSIL
Trigger: CAGAATTGAAGGATAAACCCATTGCTGTAGGATCAA...TCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR CCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCCTTAGCAATAAATCCTaGCATGGCTGCACGAACACC +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITLSNKS*HGCTNT
Trigger: GGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAG...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp GACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCACTTAGCAATAAATCCTaGCATGGCTGCACGAACACC +
Preference number: 4 (lower is better)
Translates to: DLLGRLEHSSLLCLLLKALSNKS*HGCTNT
Trigger: GGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAG...TGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp CTTTGTTGGTGTTTCCTGTCCTCTTCATTGGGAAAACTAGATATCCGAACACCCCACTATTATAAGTTGTaGGCACAGCCTCTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: LCWCFLSSSLGKLDIRTPHYYKL*AQPLSN
Trigger: ATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTG...GGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAAACACCAACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp ACTATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACACTATTATAAGTTGTaGGCACAGCCTCTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: TIISCGHSLLAINPGMAAHYYKL*AQPLSN
Trigger: ATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTG...TGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR CCA 90 bp ACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACAAAGTAGTGGAGAGATaGATCGTTCATGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: TLSSILAFLFLLQPSVLHKVVER*IVHAHS
Trigger: TGAGTGAGCATGAACGATCCATCTCTCCACTACTTT...GTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR CCA 90 bp GATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTCCTTTACCACTTCCTaGGCTGATGTTCCAAAAACA +
Preference number: 4 (lower is better)
Translates to: DLKSFVLRYKQDKLELGLSFTTS*ADVPKT
Trigger: TGTTTTTGGAACATCAGCCCAGGAAGTGGTAAAGGA...CAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp TTAAAACTTGGAATGGTTGTGATGTCTGGAAACTTTGTTTATTCACGGCTTCACGTGGCTGACAGGGCTTaGTTTCCAGCCTGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: LKLGMVVMSGNFVYSRLHVADRA*FPACKK
Trigger: CTTTTTACAGGCTGGAAACCAAGCCCTGTCAGCCAC...GTGAAGCCGTGAATAAACAAAGTTTCCAGACATCACAACCATTCCAAGTTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCCTAATGTACACTCAGTaGCTGACAGGGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITLMYTQ*LTGLGF
Trigger: GAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAG...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp CTCCATCCCTCGTCAGGTGTGTTGAACCTAGACCCAAGGAGATATGAAGGAAATATTAAAAGACTTGCTTaGGAGACTAGAACATTCTTC +
Preference number: 4 (lower is better)
Translates to: LHPSSGVLNLDPRRYEGNIKRLA*ETRTFF
Trigger: GAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAAT...ATTTCCTTCATATCTCCTTGGGTCTAGGTTCAACACACCTGACGAGGGATGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505975.5
CDS-3UTR CCA 90 bp TTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCTGGGGACAAACTAGAGCTTaGCCTGTTTTCACTTCACAT +
Preference number: 4 (lower is better)
Translates to: FLFLLQPSVLHLSYQYFWGQTRA*PVFTSH
Trigger: ATGTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCC...CCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp CTGTCCTCTTCATTGGGAAAACTAGATATCCGAACACCCATAAGCCTTAATCTCGGACAAACTAGAGCTTaGCCTGTTTTCACTTCACAT +
Preference number: 4 (lower is better)
Translates to: LSSSLGKLDIRTPISLNLGQTRA*PVFTSH
Trigger: ATGTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCC...GAGATTAAGGCTTATGGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp CTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTAGCTACCAGTACTTCTaGAGCTTTCTTTGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: LCHQSWPFCSCYSLLYSTSYQYF*SFLWVD
Trigger: ATCAACCCAAAGAAAGCTCCAGAAGTACTGGTAGCT...AGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp CTGTCCTCTTCATTGGGAAAACTAGATATCCGAACACCCATAAGCCTTAATCTCAGCTACCAGTACTTCTaGAGCTTTCTTTGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: LSSSLGKLDIRTPISLNLSYQYF*SFLWVD
Trigger: ATCAACCCAAAGAAAGCTCCAGAAGTACTGGTAGCT...GAGATTAAGGCTTATGGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp TACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACATTTCCATAAAATCTaGACCCCCGTTACCTCAGGA +
Preference number: 4 (lower is better)
Translates to: YFVINPGLFVLVTAFCTPHFHKI*TPVTSG
Trigger: TCCTGAGGTAACGGGGGTCCAGATTTTATGGAAATG...TGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000503479.6
ENST00000510815.6
CDS-3UTR CCA 90 bp TTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAAGATACTGTAGCACTTATAGCGGTGGTCTaGTGGAAAGAAAACCCTTGG +
Preference number: 4 (lower is better)
Translates to: LAYDVYAEQEGTTEDTVALIAVV*WKENPW
Trigger: CCAAGGGTTTTCTTTCCACCAGACCACCGCTATAAG...TGCTACAGTATCTTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505774.5
3UTR CAA 72 bp TTGGTTTATTCTTATCACTGCATACTTTTGCTAACATaGTATTTGGGGCAATGCCTGCACTGGCTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: LVYSYHCILLLT*YLGQCLHWLSV
Trigger: CACTGACAGCCAGTGCAGGCATTGCCCCAAATACAATGTTAGCAAAAGTATGCAGTGATAAGAATAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR TCA 90 bp TTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACTTAGCTGTTGGCTGGTaGTTTGAGCTTTTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: FVLRYKQDKLELGLFSLHLAVGW*FELFVA
Trigger: TGCAACAAAAAGCTCAAATCACCAGCCAACAGCTAA...GTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp TGTCAACCTCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAAGTTAGCTGTTGGCTGGTaGTTTGAGCTTTTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: CQPLWHMMFMLNRKVQLKLAVGW*FELFVA
Trigger: TGCAACAAAAAGCTCAAATCACCAGCCAACAGCTAA...CTTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGAGGTTGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000505774.5
ENST00000505975.5
ENST00000511527.5
CDS-3UTR TCA 90 bp TGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACATTTAGCTGTTGGCTGGTaGTTTGAGCTTTTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: CSTLQTGQTRAWPVFTSHLAVGW*FELFVA
Trigger: TGCAACAAAAAGCTCAAATCACCAGCCAACAGCTAA...ATGTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp GTAGACAGCATACTCATTGATCCTACAGCAATGGGTTTATCCTTCAATTCTGGATTAGCTGTTGGCTGGTaGTTTGAGCTTTTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: VDSILIDPTAMGLSFNSGLAVGW*FELFVA
Trigger: TGCAACAAAAAGCTCAAATCACCAGCCAACAGCTAA...TCCAGAATTGAAGGATAAACCCATTGCTGTAGGATCAATGAGTATGCTGTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR TCA 90 bp ACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACCCTTGCATGGTAATTTaGAGTAGACAGCATACTCAT +
Preference number: 4 (lower is better)
Translates to: TLSSILAFLFLLQPSVLHPCMVI*SRQHTH
Trigger: ATGAGTATGCTGTCTACTTCAAATTACCATGCAAGG...GTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR TCA 90 bp GATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGCTTTATTTATCTCACTaGATGTCCTCTCAACGCTCA +
Preference number: 4 (lower is better)
Translates to: DLKSFVLRYKQDKLELGLLYLSH*MSSQRS
Trigger: TGAGCGTTGAGAGGACATTCAGTGAGATAAATAAAG...CAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
CDS-3UTR TCA 90 bp GTAGACAGCATACTCATTGATCCTACAGCAATGGGTTTATCCTTCAATTCTGGATCACTGCAAAGTTCTTaGCATAGGCTGTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: VDSILIDPTAMGLSFNSGSLQSS*HRLYCS
Trigger: AGAGCAATACAGCCTATGTCAAGAACTTTGCAGTGA...TCCAGAATTGAAGGATAAACCCATTGCTGTAGGATCAATGAGTATGCTGTCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR TCA 90 bp TGTCAACCTCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAAGTCACTGCAAAGTTCTTaGCATAGGCTGTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: CQPLWHMMFMLNRKVQLKSLQSS*HRLYCS
Trigger: AGAGCAATACAGCCTATGTCAAGAACTTTGCAGTGA...CTTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGAGGTTGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR TCA 90 bp TTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACGGACAGGTAAGTATCTaGCAGTCATCTGAATTCTCT +
Preference number: 4 (lower is better)
Translates to: FVLRYKQDKLELGLFSLHGQVSI*QSSEFS
Trigger: AGAGAATTCAGATGACTGTCAGATACTTACCTGTCC...GTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp ATCCTTGATGAAGTCCATCACAGCTTGTCTATTGGGAAGAATTTGGTATTGTCCGGACAGGTAAGTATCTaGCAGTCATCTGAATTCTCT +
Preference number: 4 (lower is better)
Translates to: ILDEVHHSLSIGKNLVLSGQVSI*QSSEFS
Trigger: AGAGAATTCAGATGACTGTCAGATACTTACCTGTCC...GGACAATACCAAATTCTTCCCAATAGACAAGCTGTGATGGACTTCATCAAGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505975.5
CDS-3UTR TCA 90 bp TCCTTAGCAATGGCAAATATTTCTTCTGCAGTAGAAACAACAGATGAAACTGTAAGACTGATGCACCCTTaGGCCCTAAAGCAAACAGGA +
Preference number: 4 (lower is better)
Translates to: SLAMANISSAVETTDETVRLMHP*ALKQTG
Trigger: TCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCT...TACAGTTTCATCTGTTGTTTCTACTGCAGAAGAAATATTTGCCATTGCTAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000514141.5
CDS-3UTR TCA 90 bp ATCTACATGTTTATTCAAGGCTTCCAGACTGATGCACCCTTGAGCCCTAAAGCAGGTAGCAGAAACATGTaGACACGAGAACATTTTAAA +
Preference number: 4 (lower is better)
Translates to: IYMFIQGFQTDAPLSPKAGSRNM*TREHFK
Trigger: TTTAAAATGTTCTCGTGTTCACATGTTTCTGCTACC...TGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAAGCCTTGAATAAACATGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCCATCCACATGCACATTaGACAGGGTTAGATCTGAAG +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITHPHAH*TGLDLK
Trigger: CTTCAGATCTAACCCTGTTCAATGTGCATGTGGATG...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR TCA 90 bp TGGCGGTATTCTTGTCTAAATGATCCAACATCTTCGTTTTCCAATGAAACAGTACTTCTGTACTCCACTTaGGCTACCAGTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: WRYSCLNDPTSSFSNETVLLYST*ATSTSG
Trigger: TCCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAG...TACTGTTTCATTGGAAAACGAAGATGTTGGATCATTTAGACAAGAATACCGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp GCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCTGTGCACTATGGTATTaGTCAAATTTCGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: AFLFLLQPSVLHLSYQYFCALWY*SNFGFV
Trigger: AACAAAGCCGAAATTTGAGCAATACCATAGTGCACA...GAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp CTAGATATCCGAACACCCATAAGCCTTAATCTCAAGGGATGTGGAAAATCAGCAGCATCCATGTCAATGTaGACTATGGTATTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: LDIRTPISLNLKGCGKSAASMSM*TMVLLK
Trigger: TTTGAGCAATACCATAGTGCACATTGACATGGATGC...TGCTGATTTTCCACATCCCTTGAGATTAAGGCTTATGGGTGTTCGGATATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp TTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCTGGGCATCCATGTCAATGTaGACTATGGTATTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: FLFLLQPSVLHLSYQYFWASMSM*TMVLLK
Trigger: TTTGAGCAATACCATAGTGCACATTGACATGGATGC...CCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp TGTTTCCTGTCCTCTTCATTGGGAAAACTAGATATCCGAACACCCATAAGCCTTGCATCCATGTCAATGTaGACTATGGTATTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: CFLSSSLGKLDIRTPISLASMSM*TMVLLK
Trigger: TTTGAGCAATACCATAGTGCACATTGACATGGATGC...AAGGCTTATGGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp TTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACCCTCATTTCTACAGCTaGATAGAAAGCATCCATGTC +
Preference number: 4 (lower is better)
Translates to: FVLRYKQDKLELGLFSLHPHFYS*IESIHV
Trigger: GACATGGATGCTTTCTATGCAGCTGTAGAAATGAGG...GTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp CAGAAGGACTCTCTTCAAAAAGTAGTGGAGAGATGGATCGTTCATGCTCACTCAGAGATGGATCGTTCATaGTCACTCAGTTTATTAACT +
Preference number: 4 (lower is better)
Translates to: QKDSLQKVVERWIVHAHSEMDRS*SLSLLT
Trigger: AGTTAATAAACTGAGTGAGCATGAACGATCCATCTC...TGAGTGAGCATGAACGATCCATCTCTCCACTACTTTTTGAAGAGAGTCCTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR GCA 90 bp GACAGGGCTTGGTTTCCAGCCTGTAAAAAGCCAATAATGCTCCTTTGTTGGTGTGTCAGTGTTGTTTTCTaGTCAATTCTGAAACGAATT +
Preference number: 4 (lower is better)
Translates to: DRAWFPACKKPIMLLCWCVSVVF*SILKRI
Trigger: AATTCGTTTCAGAATTGAGCAGAAAACAACACTGAC...ACACCAACAAAGGAGCATTATTGGCTTTTTACAGGCTGGAAACCAAGCCCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp TCTTCCTTGCTATGCTTATTACTTAAAGCATCTATGCTTTCTGCTTTAGATGAGATTTGGGGCAATGCCTaGACTGGCTGTCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: SSLLCLLLKASMLSALDEIWGNA*TGCQCC
Trigger: ACAACACTGACAGCCAGTGCAGGCATTGCCCCAAAT...CTCATCTAAAGCAGAAAGCATAGATGCTTTAAGTAATAAGCATAGCAAGGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp TGGCGGTATTCTTGTCTAAATGATCCAACATCTTCGTTTTCCAATGAAACAGTACCTGAGCAAGCTCACTaGAAAGTTCTTGACATAGGC +
Preference number: 4 (lower is better)
Translates to: WRYSCLNDPTSSFSNETVPEQAH*KVLDIG
Trigger: GCCTATGTCAAGAACTTTGCAGTGAGCTTGCTCAGG...TACTGTTTCATTGGAAAACGAAGATGTTGGATCATTTAGACAAGAATACCGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
CDS-3UTR GCA 90 bp TGTTTCCTGTCCTCTTCATTGGGAAAACTAGATATCCGAACACCCATAAGCCTTAAGCAAACATCCACATaGACATTGAACAGGGTTAGA +
Preference number: 4 (lower is better)
Translates to: CFLSSSLGKLDIRTPISLKQTST*TLNRVR
Trigger: TCTAACCCTGTTCAATGTGCATGTGGATGTTTGCTT...AAGGCTTATGGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp TATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGTACACACAAAACCACTaGACTTCGGTATTTCTAATA +
Preference number: 4 (lower is better)
Translates to: YYKLWAQPLSNKSWHGCTYTQNH*TSVFLI
Trigger: TATTAGAAATACCGAAGTGCAGTGGTTTTGTGTGTA...CGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR CCA 90 bp CACTATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCTTTATCCTTCAATTCTaGATTGTCCCTCATTTCTAC +
Preference number: 4 (lower is better)
Translates to: HYYKLWAQPLSNKSWHGCFILQF*IVPHFY
Trigger: GTAGAAATGAGGGACAATCCAGAATTGAAGGATAAA...GCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR CCA 90 bp CTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCATCTATGCTTAGCAATAAATCCTaGCATGGCTGCACGAACACC +
Preference number: 4 (lower is better)
Translates to: LGRLEHSSLLCLLLKASMLSNKS*HGCTNT
Trigger: GGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAG...CATAGATGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp TGGCGGTATTCTTGTCTAAATGATCCAACATCTTCGTTTTCCAATGAAACAGTACTTAGCAATAAATCCTaGCATGGCTGCACGAACACC +
Preference number: 4 (lower is better)
Translates to: WRYSCLNDPTSSFSNETVLSNKS*HGCTNT
Trigger: GGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAG...TACTGTTTCATTGGAAAACGAAGATGTTGGATCATTTAGACAAGAATACCGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp ACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACCACTATTATAAGTTGTaGGCACAGCCTCTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: TLSSILAFLFLLQPSVLHHYYKL*AQPLSN
Trigger: ATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTG...GTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR CCA 90 bp TACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCAAAAGTAGTGGAGAGATaGATCGTTCATGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: YFVINPGLFVLVTAFCTPKVVER*IVHAHS
Trigger: TGAGTGAGCATGAACGATCCATCTCTCCACTACTTT...TGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR CCA 90 bp GTAGACAGCATACTCATTGATCCTACAGCAATGGGTTTATCCTTCAATTCTGGAAAAGTAGTGGAGAGATaGATCGTTCATGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: VDSILIDPTAMGLSFNSGKVVER*IVHAHS
Trigger: TGAGTGAGCATGAACGATCCATCTCTCCACTACTTT...TCCAGAATTGAAGGATAAACCCATTGCTGTAGGATCAATGAGTATGCTGTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CCA 90 bp TTAAAACTTGGAATGGTTGTGATGTCTGGAAACTTTGTTTATTCACGGCTTCACTCTTCAAAGTTCACTTaGAAAGGATCTCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LKLGMVVMSGNFVYSRLHSSKFT*KGSPGG
Trigger: GCCCCCAGGAGATCCTTTCCAAGTGAACTTTGAAGA...GTGAAGCCGTGAATAAACAAAGTTTCCAGACATCACAACCATTCCAAGTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp AATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCATCACAGCTTGTCTATTaGGAAGAATTTGGTATTGTC +
Preference number: 4 (lower is better)
Translates to: NPGLFVLVTAFCTPLELPSQLVY*EEFGIV
Trigger: GACAATACCAAATTCTTCCCAATAGACAAGCTGTGA...TGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp ATCTACATGTTTATTCAAGGCTTCCAGACTGATGCACCCTTGAGCCCTAAAGCATCACAGCTTGTCTATTaGGAAGAATTTGGTATTGTC +
Preference number: 4 (lower is better)
Translates to: IYMFIQGFQTDAPLSPKASQLVY*EEFGIV
Trigger: GACAATACCAAATTCTTCCCAATAGACAAGCTGTGA...TGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAAGCCTTGAATAAACATGTAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp TGGCGGTATTCTTGTCTAAATGATCCAACATCTTCGTTTTCCAATGAAACAGTACTAATGTACACTCAGTaGCTGACAGGGCTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: WRYSCLNDPTSSFSNETVLMYTQ*LTGLGF
Trigger: GAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAG...TACTGTTTCATTGGAAAACGAAGATGTTGGATCATTTAGACAAGAATACCGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp TACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCAGGACAAACTAGAGCTTaGCCTGTTTTCACTTCACAT +
Preference number: 4 (lower is better)
Translates to: YFVINPGLFVLVTAFCTPGQTRA*PVFTSH
Trigger: ATGTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCC...TGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp TCCTTAGCAATGGCAAATATTTCTTCTGCAGTAGAAACAACAGATGAAACTGTATCTCGCTCTTCAGGCTaGAGTACAGTGGCAAGATCT +
Preference number: 4 (lower is better)
Translates to: SLAMANISSAVETTDETVSRSSG*STVARS
Trigger: AGATCTTGCCACTGTACTCCAGCCTGAAGAGCGAGA...TACAGTTTCATCTGTTGTTTCTACTGCAGAAGAAATATTTGCCATTGCTAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514141.5
CDS-3UTR TCA 90 bp CTGTCAACCTCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAATGTTGGCTGGTGATTTaGGCTTTTTGTTGCATCATA +
Preference number: 4 (lower is better)
Translates to: LSTSLAYDVYAEQEGTTECWLVI*AFCCII
Trigger: TATGATGCAACAAAAAGCTCAAATCACCAGCCAACA...TTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGAGGTTGACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000505774.5
ENST00000505975.5
ENST00000511527.5
CDS-3UTR TCA 90 bp ACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTGTTCCAAAAACAACTaGGTTTTGGAGTATTTGAGG +
Preference number: 4 (lower is better)
Translates to: TLSSILAFLFLLQPSVLHCSKNN*VLEYLR
Trigger: CCTCAAATACTCCAAAACTCAGTTGTTTTTGGAACA...GTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR TCA 90 bp TACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTTATTTATCTCACTaGATGTCCTCTCAACGCTCA +
Preference number: 4 (lower is better)
Translates to: YFVINPGLFVLVTAFCTPLYLSH*MSSQRS
Trigger: TGAGCGTTGAGAGGACATTCAGTGAGATAAATAAAG...TGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
CDS-3UTR TCA 90 bp TGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACATCTTTATTTATCTCACTaGATGTCCTCTCAACGCTCA +
Preference number: 4 (lower is better)
Translates to: CSTLQTGQTRAWPVFTSHLYLSH*MSSQRS
Trigger: TGAGCGTTGAGAGGACATTCAGTGAGATAAATAAAG...ATGTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
CDS-3UTR TCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCTCACTGCAAAGTTCTTaGCATAGGCTGTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITSLQSS*HRLYCS
Trigger: AGAGCAATACAGCCTATGTCAAGAACTTTGCAGTGA...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR TCA 90 bp GACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCATCACTGCAAAGTTCTTaGCATAGGCTGTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: DLLGRLEHSSLLCLLLKASLQSS*HRLYCS
Trigger: AGAGCAATACAGCCTATGTCAAGAACTTTGCAGTGA...TGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
CDS-3UTR TCA 90 bp TGTTTCCTGTCCTCTTCATTGGGAAAACTAGATATCCGAACACCCATAAGCCTTAACTTGGAATGGTTGTaGTGTCTGGAAACTTTGTTT +
Preference number: 4 (lower is better)
Translates to: CFLSSSLGKLDIRTPISLNLEWL*CLETLF
Trigger: AAACAAAGTTTCCAGACATCACAACCATTCCAAGTT...AAGGCTTATGGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp GACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCAGGACAGGTAAGTATCTaGCAGTCATCTGAATTCTCT +
Preference number: 4 (lower is better)
Translates to: DLLGRLEHSSLLCLLLKAGQVSI*QSSEFS
Trigger: AGAGAATTCAGATGACTGTCAGATACTTACCTGTCC...TGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp ACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACGGTAGCAGAAACATGTaGACACGAGAACATTTTAAA +
Preference number: 4 (lower is better)
Translates to: TLSSILAFLFLLQPSVLHGSRNM*TREHFK
Trigger: TTTAAAATGTTCTCGTGTTCACATGTTTCTGCTACC...GTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp ACTTGGAATGGTTGTGATGTCTGGAAACTTTGTTTATTCACGGCTTCACATTTACATCCACATGCACATTaGACAGGGTTAGATCTGAAG +
Preference number: 4 (lower is better)
Translates to: TWNGCDVWKLCLFTASHLHPHAH*TGLDLK
Trigger: CTTCAGATCTAACCCTGTTCAATGTGCATGTGGATG...TAAATGTGAAGCCGTGAATAAACAAAGTTTCCAGACATCACAACCATTCCAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp TCTTCCTTGCTATGCTTATTACTTAAAGCATCTATGCTTTCTGCTTTAGATGAGCTTCTGTACTCCACTTaGGCTACCAGTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SSLLCLLLKASMLSALDELLYST*ATSTSG
Trigger: TCCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAG...CTCATCTAAAGCAGAAAGCATAGATGCTTTAAGTAATAAGCATAGCAAGGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp TTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACACAGGAAGGTACAACTaGAGATACTGTAGCATAATG +
Preference number: 4 (lower is better)
Translates to: FVLRYKQDKLELGLFSLHTGRYN*RYCSIM
Trigger: CATTATGCTACAGTATCTTCAGTTGTACCTTCCTGT...GTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000510815.6
CDS-3UTR GCA 90 bp GCTGTATTGCTCTTCCGCTTTATTTATCTCACTGAATGTCCTCTCAACGCTCATTGTGCACTATGGTATTaGTCAAATTTCGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: AVLLFRFIYLTECPLNAHCALWY*SNFGFV
Trigger: AACAAAGCCGAAATTTGAGCAATACCATAGTGCACA...ATGAGCGTTGAGAGGACATTCAGTGAGATAAATAAAGCGGAAGAGCAATACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR GCA 90 bp CTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGTGCACTATGGTATTaGTCAAATTTCGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LCHQSWPFCSCYSLLYSTCALWY*SNFGFV
Trigger: AACAAAGCCGAAATTTGAGCAATACCATAGTGCACA...AGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR GCA 90 bp TACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCAGCATCCATGTCAATGTaGACTATGGTATTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: YFVINPGLFVLVTAFCTPASMSM*TMVLLK
Trigger: TTTGAGCAATACCATAGTGCACATTGACATGGATGC...TGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR GCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCCCTCATTTCTACAGCTaGATAGAAAGCATCCATGTC +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITPHFYS*IESIHV
Trigger: GACATGGATGCTTTCTATGCAGCTGTAGAAATGAGG...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR GCA 90 bp TCTTCCTTGCTATGCTTATTACTTAAAGCATCTATGCTTTCTGCTTTAGATGAGAAATCCTGGCATGGCTaGACGAACACCAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: SSLLCLLLKASMLSALDEKSWHG*TNTKSP
Trigger: AGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTT...CTCATCTAAAGCAGAAAGCATAGATGCTTTAAGTAATAAGCATAGCAAGGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp TTAAAAGACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAATCCTGGCATGGCTaGACGAACACCAAATCTCCT +
Preference number: 4 (lower is better)
Translates to: LKDLLGRLEHSSLLCLLLKSWHG*TNTKSP
Trigger: AGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTT...AAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp CTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTGAGATGGATCGTTCATaGTCACTCAGTTTATTAACT +
Preference number: 4 (lower is better)
Translates to: LCHQSWPFCSCYSLLYSTEMDRS*SLSLLT
Trigger: AGTTAATAAACTGAGTGAGCATGAACGATCCATCTC...AGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR GCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCAAGGAGAGAAAGCAATaGCCTCTGTTGGTAAAGTTC +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITKERKQ*PLLVKF
Trigger: GAACTTTACCAACAGAGGGCATTGCTTTCTCTCCTT...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR GCA 90 bp CAGCTGCATAGAAAGCATCCATGTCAATGTGCACTATGGTATTGCTCAAATTTCAAGCAAACATCCACATaGACATTGAACAGGGTTAGA +
Preference number: 4 (lower is better)
Translates to: QLHRKHPCQCALWYCSNFKQTST*TLNRVR
Trigger: TCTAACCCTGTTCAATGTGCATGTGGATGTTTGCTT...GAAATTTGAGCAATACCATAGTGCACATTGACATGGATGCTTTCTATGCAGCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505975.5
CDS-3UTR CCA 90 bp ATCTACATGTTTATTCAAGGCTTCCAGACTGATGCACCCTTGAGCCCTAAAGCATTTATCCTTCAATTCTaGATTGTCCCTCATTTCTAC +
Preference number: 4 (lower is better)
Translates to: IYMFIQGFQTDAPLSPKAFILQF*IVPHFY
Trigger: GTAGAAATGAGGGACAATCCAGAATTGAAGGATAAA...TGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAAGCCTTGAATAAACATGTAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp CTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTTGATCCTACAGCAATaGGTTTATCCTTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: LCHQSWPFCSCYSLLYSTLILQQ*VYPSIL
Trigger: CAGAATTGAAGGATAAACCCATTGCTGTAGGATCAA...AGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR CCA 90 bp TGTTTCCTGTCCTCTTCATTGGGAAAACTAGATATCCGAACACCCATAAGCCTTTTGATCCTACAGCAATaGGTTTATCCTTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: CFLSSSLGKLDIRTPISLLILQQ*VYPSIL
Trigger: CAGAATTGAAGGATAAACCCATTGCTGTAGGATCAA...AAGGCTTATGGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp TACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACACTATTATAAGTTGTaGGCACAGCCTCTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: YFVINPGLFVLVTAFCTPHYYKL*AQPLSN
Trigger: ATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTG...TGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR CCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCTCCTTTACCACTTCCTaGGCTGATGTTCCAAAAACA +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITSFTTS*ADVPKT
Trigger: TGTTTTTGGAACATCAGCCCAGGAAGTGGTAAAGGA...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp TCATTGATCCTACAGCAATGGGTTTATCCTTCAATTCTGGATTGTCCCTCATTTTCCTTTACCACTTCCTaGGCTGATGTTCCAAAAACA +
Preference number: 4 (lower is better)
Translates to: SLILQQWVYPSILDCPSFSFTTS*ADVPKT
Trigger: TGTTTTTGGAACATCAGCCCAGGAAGTGGTAAAGGA...AAATGAGGGACAATCCAGAATTGAAGGATAAACCCATTGCTGTAGGATCAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CCA 90 bp TATTGCTCTTCCGCTTTATTTATCTCACTGAATGTCCTCTCAACGCTCATACTTTCCTTTACCACTTCCTaGGCTGATGTTCCAAAAACA +
Preference number: 4 (lower is better)
Translates to: YCSSALFISLNVLSTLILSFTTS*ADVPKT
Trigger: TGTTTTTGGAACATCAGCCCAGGAAGTGGTAAAGGA...AAGTATGAGCGTTGAGAGGACATTCAGTGAGATAAATAAAGCGGAAGAGCAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CCA 90 bp ATCTACATGTTTATTCAAGGCTTCCAGACTGATGCACCCTTGAGCCCTAAAGCAATTAAAAGACTTGCTTaGGAGACTAGAACATTCTTC +
Preference number: 4 (lower is better)
Translates to: IYMFIQGFQTDAPLSPKAIKRLA*ETRTFF
Trigger: GAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAAT...TGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAAGCCTTGAATAAACATGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCGGACAAACTAGAGCTTaGCCTGTTTTCACTTCACAT +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITGQTRA*PVFTSH
Trigger: ATGTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCC...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp GGCTTCATCAAGACTCATGGCCATAAAATTGGGATCATAATCAGCAAGTATTTCAGCTACCAGTACTTCTaGAGCTTTCTTTGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: GFIKTHGHKIGIIISKYFSYQYF*SFLWVD
Trigger: ATCAACCCAAAGAAAGCTCCAGAAGTACTGGTAGCT...GAAATACTTGCTGATTATGATCCCAATTTTATGGCCATGAGTCTTGATGAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505975.5
CDS-3UTR CCA 90 bp GACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCAAGCTACCAGTACTTCTaGAGCTTTCTTTGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: DLLGRLEHSSLLCLLLKASYQYF*SFLWVD
Trigger: ATCAACCCAAAGAAAGCTCCAGAAGTACTGGTAGCT...TGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp CTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTAGAAGTAACAGAAAATaGCTTCCAACTTCATGTTGC +
Preference number: 4 (lower is better)
Translates to: LCHQSWPFCSCYSLLYSTRSNRK*LPTSCC
Trigger: GCAACATGAAGTTGGAAGCCATTTTCTGTTACTTCT...AGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514141.5
CDS-3UTR CCA 90 bp CCTCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAAGATACTGCCTTTGTGCTATCCATaGTATAAACTTATAGCGGTG +
Preference number: 4 (lower is better)
Translates to: PLWHMMFMLNRKVQLKILPLCYP*YKLIAV
Trigger: CACCGCTATAAGTTTATACCATGGATAGCACAAAGG...CAGTATCTTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505774.5
CDS-3UTR TCA 90 bp TGGCGGTATTCTTGTCTAAATGATCCAACATCTTCGTTTTCCAATGAAACAGTAAGACAGCATACTCATTaGTCCTACAGCAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: WRYSCLNDPTSSFSNETVRQHTH*SYSNGF
Trigger: AAACCCATTGCTGTAGGATCAATGAGTATGCTGTCT...TACTGTTTCATTGGAAAACGAAGATGTTGGATCATTTAGACAAGAATACCGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp ACATTGAACAGGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAAGACAGCATACTCATTaGTCCTACAGCAATGGGTTT +
Preference number: 4 (lower is better)
Translates to: TLNRVRSEVFCSTLQTGQRQHTH*SYSNGF
Trigger: AAACCCATTGCTGTAGGATCAATGAGTATGCTGTCT...TTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCCTGTTCAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCCCTTGCATGGTAATTTaGAGTAGACAGCATACTCAT +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITPCMVI*SRQHTH
Trigger: ATGAGTATGCTGTCTACTTCAAATTACCATGCAAGG...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR TCA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTCCTTGCATGGTAATTTaGAGTAGACAGCATACTCAT +
Preference number: 4 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELPCMVI*SRQHTH
Trigger: ATGAGTATGCTGTCTACTTCAAATTACCATGCAAGG...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp TACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCATGTTCCAAAAACAACTaGGTTTTGGAGTATTTGAGG +
Preference number: 4 (lower is better)
Translates to: YFVINPGLFVLVTAFCTPCSKNN*VLEYLR
Trigger: CCTCAAATACTCCAAAACTCAGTTGTTTTTGGAACA...TGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR TCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCCTTTATTTATCTCACTaGATGTCCTCTCAACGCTCA +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITLYLSH*MSSQRS
Trigger: TGAGCGTTGAGAGGACATTCAGTGAGATAAATAAAG...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR TCA 90 bp ACATTGAACAGGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAGGACAGGTAAGTATCTaGCAGTCATCTGAATTCTCT +
Preference number: 4 (lower is better)
Translates to: TLNRVRSEVFCSTLQTGQGQVSI*QSSEFS
Trigger: AGAGAATTCAGATGACTGTCAGATACTTACCTGTCC...TTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCCTGTTCAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp CAACCTCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAAGATAACAGGAAGGTACAACTaGAGATACTGTAGCATAATG +
Preference number: 4 (lower is better)
Translates to: QPLWHMMFMLNRKVQLKITGRYN*RYCSIM
Trigger: CATTATGCTACAGTATCTTCAGTTGTACCTTCCTGT...TATCTTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGAGGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505774.5
ENST00000505975.5
ENST00000511527.5
CDS-3UTR TCA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTACAGGAAGGTACAACTaGAGATACTGTAGCATAATG +
Preference number: 4 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELTGRYN*RYCSIM
Trigger: CATTATGCTACAGTATCTTCAGTTGTACCTTCCTGT...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000510815.6
CDS-3UTR GCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCAAGCAAACATCCACATaGACATTGAACAGGGTTAGA +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITKQTST*TLNRVR
Trigger: TCTAACCCTGTTCAATGTGCATGTGGATGTTTGCTT...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR GCA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTAAGCAAACATCCACATaGACATTGAACAGGGTTAGA +
Preference number: 4 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELKQTST*TLNRVR
Trigger: TCTAACCCTGTTCAATGTGCATGTGGATGTTTGCTT...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCAAAAGTGAACATCCATaGAATCACCACCCAAGACAA +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITKSEHP*NHHPRQ
Trigger: TTGTCTTGGGTGGTGATTGCATGGATGTTCACTTTT...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTTGTCAATGTGCACTATaGTATTGCTCAAATTTCGGC +
Preference number: 4 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELCQCAL*YCSNFG
Trigger: GCCGAAATTTGAGCAATACCATAGTGCACATTGACA...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp AGAAAGCATCCATGTCAATGTGCACTATGGTATTGCTCAAATTTCGGCTTTGTTTGTCAATGTGCACTATaGTATTGCTCAAATTTCGGC +
Preference number: 4 (lower is better)
Translates to: RKHPCQCALWYCSNFGFVCQCAL*YCSNFG
Trigger: GCCGAAATTTGAGCAATACCATAGTGCACATTGACA...AACAAAGCCGAAATTTGAGCAATACCATAGTGCACATTGACATGGATGCTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CCA 90 bp TGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACATTTGATCCTACAGCAATaGGTTTATCCTTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: CSTLQTGQTRAWPVFTSHLILQQ*VYPSIL
Trigger: CAGAATTGAAGGATAAACCCATTGCTGTAGGATCAA...ATGTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp CAGCTGCATAGAAAGCATCCATGTCAATGTGCACTATGGTATTGCTCAAATTTCTTGATCCTACAGCAATaGGTTTATCCTTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: QLHRKHPCQCALWYCSNFLILQQ*VYPSIL
Trigger: CAGAATTGAAGGATAAACCCATTGCTGTAGGATCAA...GAAATTTGAGCAATACCATAGTGCACATTGACATGGATGCTTTCTATGCAGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCCACTATTATAAGTTGTaGGCACAGCCTCTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITHYYKL*AQPLSN
Trigger: ATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTG...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp TGGCGGTATTCTTGTCTAAATGATCCAACATCTTCGTTTTCCAATGAAACAGTAAAAGTAGTGGAGAGATaGATCGTTCATGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: WRYSCLNDPTSSFSNETVKVVER*IVHAHS
Trigger: TGAGTGAGCATGAACGATCCATCTCTCCACTACTTT...TACTGTTTCATTGGAAAACGAAGATGTTGGATCATTTAGACAAGAATACCGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp ACATTGAACAGGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAAAAGTAGTGGAGAGATaGATCGTTCATGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: TLNRVRSEVFCSTLQTGQKVVER*IVHAHS
Trigger: TGAGTGAGCATGAACGATCCATCTCTCCACTACTTT...TTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCCTGTTCAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp TGGCGGTATTCTTGTCTAAATGATCCAACATCTTCGTTTTCCAATGAAACAGTATCCTTTACCACTTCCTaGGCTGATGTTCCAAAAACA +
Preference number: 4 (lower is better)
Translates to: WRYSCLNDPTSSFSNETVSFTTS*ADVPKT
Trigger: TGTTTTTGGAACATCAGCCCAGGAAGTGGTAAAGGA...TACTGTTTCATTGGAAAACGAAGATGTTGGATCATTTAGACAAGAATACCGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp CTGTCAACCTCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAATCACAGCTTGTCTATTaGGAAGAATTTGGTATTGTC +
Preference number: 4 (lower is better)
Translates to: LSTSLAYDVYAEQEGTTESQLVY*EEFGIV
Trigger: GACAATACCAAATTCTTCCCAATAGACAAGCTGTGA...TTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGAGGTTGACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CCA 90 bp ACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACATTAAAAGACTTGCTTaGGAGACTAGAACATTCTTC +
Preference number: 4 (lower is better)
Translates to: TLSSILAFLFLLQPSVLHIKRLA*ETRTFF
Trigger: GAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAAT...GTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp ACTTGGAATGGTTGTGATGTCTGGAAACTTTGTTTATTCACGGCTTCACATTTAGGACAAACTAGAGCTTaGCCTGTTTTCACTTCACAT +
Preference number: 4 (lower is better)
Translates to: TWNGCDVWKLCLFTASHLGQTRA*PVFTSH
Trigger: ATGTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCC...TAAATGTGAAGCCGTGAATAAACAAAGTTTCCAGACATCACAACCATTCCAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp TGTCAACCTCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAAGATCTGTCAACCTCTTTaGCATATGATGTTTATGCTG +
Preference number: 4 (lower is better)
Translates to: CQPLWHMMFMLNRKVQLKICQPL*HMMFML
Trigger: CAGCATAAACATCATATGCCAAAGAGGTTGACAGAT...CTTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGAGGTTGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505774.5
ENST00000505975.5
ENST00000511527.5
CDS-3UTR TCA 90 bp CTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCATCTATGTGTTGGCTGGTGATTTaGGCTTTTTGTTGCATCATA +
Preference number: 4 (lower is better)
Translates to: LGRLEHSSLLCLLLKASMCWLVI*AFCCII
Trigger: TATGATGCAACAAAAAGCTCAAATCACCAGCCAACA...CATAGATGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp GACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCATGTTCCAAAAACAACTaGGTTTTGGAGTATTTGAGG +
Preference number: 4 (lower is better)
Translates to: DLLGRLEHSSLLCLLLKACSKNN*VLEYLR
Trigger: CCTCAAATACTCCAAAACTCAGTTGTTTTTGGAACA...TGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp ACTTGGAATGGTTGTGATGTCTGGAAACTTTGTTTATTCACGGCTTCACATTTACTTTATTTATCTCACTaGATGTCCTCTCAACGCTCA +
Preference number: 4 (lower is better)
Translates to: TWNGCDVWKLCLFTASHLLYLSH*MSSQRS
Trigger: TGAGCGTTGAGAGGACATTCAGTGAGATAAATAAAG...TAAATGTGAAGCCGTGAATAAACAAAGTTTCCAGACATCACAACCATTCCAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
CDS-3UTR TCA 90 bp TCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTAACTTGGAATGGTTGTaGTGTCTGGAAACTTTGTTT +
Preference number: 4 (lower is better)
Translates to: SFVLRYKQDKLELGLFSLNLEWL*CLETLF
Trigger: AAACAAAGTTTCCAGACATCACAACCATTCCAAGTT...AAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCGGTAGCAGAAACATGTaGACACGAGAACATTTTAAA +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITGSRNM*TREHFK
Trigger: TTTAAAATGTTCTCGTGTTCACATGTTTCTGCTACC...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR GCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCTGTGCACTATGGTATTaGTCAAATTTCGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITCALWY*SNFGFV
Trigger: AACAAAGCCGAAATTTGAGCAATACCATAGTGCACA...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR GCA 90 bp TTAAAAGACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTCCTCATTTCTACAGCTaGATAGAAAGCATCCATGTC +
Preference number: 4 (lower is better)
Translates to: LKDLLGRLEHSSLLCLLLPHFYS*IESIHV
Trigger: GACATGGATGCTTTCTATGCAGCTGTAGAAATGAGG...AAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp GTAGACAGCATACTCATTGATCCTACAGCAATGGGTTTATCCTTCAATTCTGGAGTCAGTGTTGTTTTCTaGTCAATTCTGAAACGAATT +
Preference number: 4 (lower is better)
Translates to: VDSILIDPTAMGLSFNSGVSVVF*SILKRI
Trigger: AATTCGTTTCAGAATTGAGCAGAAAACAACACTGAC...TCCAGAATTGAAGGATAAACCCATTGCTGTAGGATCAATGAGTATGCTGTCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCCCTTTGTGCTATCCATaGTATAAACTTATCCGTTAC +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITPLCYP*YKLIRY
Trigger: GTAACGGATAAGTTTATACCATGGATAGCACAAAGG...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp TGGCGGTATTCTTGTCTAAATGATCCAACATCTTCGTTTTCCAATGAAACAGTATGTCAATGTGCACTATaGTATTGCTCAAATTTCGGC +
Preference number: 4 (lower is better)
Translates to: WRYSCLNDPTSSFSNETVCQCAL*YCSNFG
Trigger: GCCGAAATTTGAGCAATACCATAGTGCACATTGACA...TACTGTTTCATTGGAAAACGAAGATGTTGGATCATTTAGACAAGAATACCGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp TGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACATTTTATCCTTCAATTCTaGATTGTCCCTCATTTCTAC +
Preference number: 4 (lower is better)
Translates to: CSTLQTGQTRAWPVFTSHFILQF*IVPHFY
Trigger: GTAGAAATGAGGGACAATCCAGAATTGAAGGATAAA...ATGTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCTTGATCCTACAGCAATaGGTTTATCCTTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITLILQQ*VYPSIL
Trigger: CAGAATTGAAGGATAAACCCATTGCTGTAGGATCAA...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp ACTTGGAATGGTTGTGATGTCTGGAAACTTTGTTTATTCACGGCTTCACATTTACACTATTATAAGTTGTaGGCACAGCCTCTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: TWNGCDVWKLCLFTASHLHYYKL*AQPLSN
Trigger: ATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTG...TAAATGTGAAGCCGTGAATAAACAAAGTTTCCAGACATCACAACCATTCCAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp ACATTGAACAGGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAACACTATTATAAGTTGTaGGCACAGCCTCTTAGCAAT +
Preference number: 4 (lower is better)
Translates to: TLNRVRSEVFCSTLQTGQHYYKL*AQPLSN
Trigger: ATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTG...TTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCCTGTTCAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp TCTTCCTTGCTATGCTTATTACTTAAAGCATCTATGCTTTCTGCTTTAGATGAGTCCTTTACCACTTCCTaGGCTGATGTTCCAAAAACA +
Preference number: 4 (lower is better)
Translates to: SSLLCLLLKASMLSALDESFTTS*ADVPKT
Trigger: TGTTTTTGGAACATCAGCCCAGGAAGTGGTAAAGGA...CTCATCTAAAGCAGAAAGCATAGATGCTTTAAGTAATAAGCATAGCAAGGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp AGAAAGCATCCATGTCAATGTGCACTATGGTATTGCTCAAATTTCGGCTTTGTTTCACAGCTTGTCTATTaGGAAGAATTTGGTATTGTC +
Preference number: 4 (lower is better)
Translates to: RKHPCQCALWYCSNFGFVSQLVY*EEFGIV
Trigger: GACAATACCAAATTCTTCCCAATAGACAAGCTGTGA...AACAAAGCCGAAATTTGAGCAATACCATAGTGCACATTGACATGGATGCTTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCAGAAGTAACAGAAAATaGCTTCCAACTTCATGTTGC +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITRSNRK*LPTSCC
Trigger: GCAACATGAAGTTGGAAGCCATTTTCTGTTACTTCT...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp CAACCTCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAAGATAATCTGTCAACCTCTTTaGCATATGATGTTTATGCTG +
Preference number: 4 (lower is better)
Translates to: QPLWHMMFMLNRKVQLKIICQPL*HMMFML
Trigger: CAGCATAAACATCATATGCCAAAGAGGTTGACAGAT...TATCTTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGAGGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505774.5
ENST00000505975.5
ENST00000511527.5
3UTR CAA 72 bp GGTAAATCCTTGATGAAGTCCATCACAGCTTGTCTATaGGGAAGAATTTGGTATTGTCCATTTGGTTTATTC +
Preference number: 4 (lower is better)
Translates to: GKSLMKSITACL*GRIWYCPFGLF
Trigger: GAATAAACCAAATGGACAATACCAAATTCTTCCCAATAGACAAGCTGTGATGGACTTCATCAAGGATTTACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR TCA 90 bp TCCTTAGCAATGGCAAATATTTCTTCTGCAGTAGAAACAACAGATGAAACTGTATGTTGGCTGGTGATTTaGGCTTTTTGTTGCATCATA +
Preference number: 4 (lower is better)
Translates to: SLAMANISSAVETTDETVCWLVI*AFCCII
Trigger: TATGATGCAACAAAAAGCTCAAATCACCAGCCAACA...TACAGTTTCATCTGTTGTTTCTACTGCAGAAGAAATATTTGCCATTGCTAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000514141.5
CDS-3UTR TCA 90 bp TTAAAAGACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTCCTTGCATGGTAATTTaGAGTAGACAGCATACTCAT +
Preference number: 4 (lower is better)
Translates to: LKDLLGRLEHSSLLCLLLPCMVI*SRQHTH
Trigger: ATGAGTATGCTGTCTACTTCAAATTACCATGCAAGG...AAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp TTAAAACTTGGAATGGTTGTGATGTCTGGAAACTTTGTTTATTCACGGCTTCACAACTTGGAATGGTTGTaGTGTCTGGAAACTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LKLGMVVMSGNFVYSRLHNLEWL*CLETLF
Trigger: AAACAAAGTTTCCAGACATCACAACCATTCCAAGTT...GTGAAGCCGTGAATAAACAAAGTTTCCAGACATCACAACCATTCCAAGTTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp ACTTGGAATGGTTGTGATGTCTGGAAACTTTGTTTATTCACGGCTTCACATTTATGTGCACTATGGTATTaGTCAAATTTCGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: TWNGCDVWKLCLFTASHLCALWY*SNFGFV
Trigger: AACAAAGCCGAAATTTGAGCAATACCATAGTGCACA...TAAATGTGAAGCCGTGAATAAACAAAGTTTCCAGACATCACAACCATTCCAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp TTCAATATTAAAAGACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTGCATCCATGTCAATGTaGACTATGGTATTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: FNIKRLAWETRTFFLAMLASMSM*TMVLLK
Trigger: TTTGAGCAATACCATAGTGCACATTGACATGGATGC...AAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAATATTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp TTAAAACTTGGAATGGTTGTGATGTCTGGAAACTTTGTTTATTCACGGCTTCACGAGATGGATCGTTCATaGTCACTCAGTTTATTAACT +
Preference number: 4 (lower is better)
Translates to: LKLGMVVMSGNFVYSRLHEMDRS*SLSLLT
Trigger: AGTTAATAAACTGAGTGAGCATGAACGATCCATCTC...GTGAAGCCGTGAATAAACAAAGTTTCCAGACATCACAACCATTCCAAGTTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp TCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAAGATACTGTAGAGATGGATCGTTCATaGTCACTCAGTTTATTAACT +
Preference number: 4 (lower is better)
Translates to: SLAYDVYAEQEGTTEDTVEMDRS*SLSLLT
Trigger: AGTTAATAAACTGAGTGAGCATGAACGATCCATCTC...TACAGTATCTTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR GCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCGTCAGTGTTGTTTTCTaGTCAATTCTGAAACGAATT +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITVSVVF*SILKRI
Trigger: AATTCGTTTCAGAATTGAGCAGAAAACAACACTGAC...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR GCA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGTCAGTGTTGTTTTCTaGTCAATTCTGAAACGAATT +
Preference number: 4 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELVSVVF*SILKRI
Trigger: AATTCGTTTCAGAATTGAGCAGAAAACAACACTGAC...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCGGACAGCAAAACACTTaGTTTTCTTTACAGTTGTAT +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITGQQNT*FSLQLY
Trigger: ATACAACTGTAAAGAAAAGCAAGTGTTTTGCTGTCC...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp TCTTCCTTGCTATGCTTATTACTTAAAGCATCTATGCTTTCTGCTTTAGATGAGTGTCAATGTGCACTATaGTATTGCTCAAATTTCGGC +
Preference number: 4 (lower is better)
Translates to: SSLLCLLLKASMLSALDECQCAL*YCSNFG
Trigger: GCCGAAATTTGAGCAATACCATAGTGCACATTGACA...CTCATCTAAAGCAGAAAGCATAGATGCTTTAAGTAATAAGCATAGCAAGGAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCATTAAAAGACTTGCTTaGGAGACTAGAACATTCTTC +
Preference number: 4 (lower is better)
Translates to: GTNFSTVIVFNVRADIITIKRLA*ETRTFF
Trigger: GAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAAT...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CCA 90 bp TCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTATTAAAAGACTTGCTTaGGAGACTAGAACATTCTTC +
Preference number: 4 (lower is better)
Translates to: SFVLRYKQDKLELGLFSLIKRLA*ETRTFF
Trigger: GAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAAT...AAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR TCA 90 bp TTAAAAGACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTGGTAGCAGAAACATGTaGACACGAGAACATTTTAAA +
Preference number: 4 (lower is better)
Translates to: LKDLLGRLEHSSLLCLLLGSRNM*TREHFK
Trigger: TTTAAAATGTTCTCGTGTTCACATGTTTCTGCTACC...AAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp TTAAAAGACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTGAGATGGATCGTTCATaGTCACTCAGTTTATTAACT +
Preference number: 4 (lower is better)
Translates to: LKDLLGRLEHSSLLCLLLEMDRS*SLSLLT
Trigger: AGTTAATAAACTGAGTGAGCATGAACGATCCATCTC...AAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp ACATTGAACAGGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAGTCAGTGTTGTTTTCTaGTCAATTCTGAAACGAATT +
Preference number: 4 (lower is better)
Translates to: TLNRVRSEVFCSTLQTGQVSVVF*SILKRI
Trigger: AATTCGTTTCAGAATTGAGCAGAAAACAACACTGAC...TTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCCTGTTCAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR GCA 90 bp TGGCGGTATTCTTGTCTAAATGATCCAACATCTTCGTTTTCCAATGAAACAGTAGTCAGTGTTGTTTTCTaGTCAATTCTGAAACGAATT +
Preference number: 4 (lower is better)
Translates to: WRYSCLNDPTSSFSNETVVSVVF*SILKRI
Trigger: AATTCGTTTCAGAATTGAGCAGAAAACAACACTGAC...TACTGTTTCATTGGAAAACGAAGATGTTGGATCATTTAGACAAGAATACCGCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp TGGCGGTATTCTTGTCTAAATGATCCAACATCTTCGTTTTCCAATGAAACAGTATTTATCCTTCAATTCTaGATTGTCCCTCATTTCTAC +
Preference number: 4 (lower is better)
Translates to: WRYSCLNDPTSSFSNETVFILQF*IVPHFY
Trigger: GTAGAAATGAGGGACAATCCAGAATTGAAGGATAAA...TACTGTTTCATTGGAAAACGAAGATGTTGGATCATTTAGACAAGAATACCGCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp TTAAAACTTGGAATGGTTGTGATGTCTGGAAACTTTGTTTATTCACGGCTTCACATTAAAAGACTTGCTTaGGAGACTAGAACATTCTTC +
Preference number: 4 (lower is better)
Translates to: LKLGMVVMSGNFVYSRLHIKRLA*ETRTFF
Trigger: GAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAAT...GTGAAGCCGTGAATAAACAAAGTTTCCAGACATCACAACCATTCCAAGTTTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CCA 90 bp TTAAAAGACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTATCTGTCAACCTCTTTaGCATATGATGTTTATGCTG +
Preference number: 4 (lower is better)
Translates to: LKDLLGRLEHSSLLCLLLICQPL*HMMFML
Trigger: CAGCATAAACATCATATGCCAAAGAGGTTGACAGAT...AAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000510815.6
3UTR CAA 72 bp ATCATGTTGATGGCATCCTTCTGTGATTTGCTTCTTTaGCTCTATGCTATGTCTGTGATATTCATCTATGTT +
Preference number: 4 (lower is better)
Translates to: IMLMASFCDLLL*LYAMSVIFIYV
Trigger: AACATAGATGAATATCACAGACATAGCATAGAGCAAAAGAAGCAAATCACAGAAGGATGCCATCAACATGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS GCA 90 bp CTCCCAGGAGGCTGCGCGAGCGACGGACCAACGCCCTTCCCAGAATaGAGCACAGCTGCATCCCTACCCCGCCCTCTCCTTTCTCCGCTC +
Preference number: 5 (lower is better)
Translates to: LPGGCASDGPTPFPE*STAASLPRPLLSPL
Trigger: GAGCGGAGAAAGGAGAGGGCGGGGTAGGGATGCAGCTGTGCTGCATTCTGGGAAGGGCGTTGGTCCGTCGCTCGCGCAGCCTCCTGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS GCA 90 bp CTGCGCGAGCGACGGACCAACGCCCTTCCCAGAATGCAGCACAGCTaGATCCCTACCCCGCCCTCTCCTTTCTCCGCTCCTCCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: LRERRTNALPRMQHS*IPTPPSPFSAPPAF
Trigger: AAAAGCAGGAGGAGCGGAGAAAGGAGAGGGCGGGGTAGGGATGCAGCTGTGCTGCATTCTGGGAAGGGCGTTGGTCCGTCGCTCGCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTCAGACTGATGCACCCTaGAGCCCTAAAGCAAACAGG +
Preference number: 5 (lower is better)
Translates to: IASIPEAPGATPQSHCCTQTDAP*SPKANR
Trigger: CCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTG...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp TATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACAACCCCAGCCCATGGTaGAGGCGGAAGCGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: YKLWAQPLSNKSWHGCTNNPSPW*RRKRPD
Trigger: ATCTGGCCGCTTCCGCCTCAACCATGGGCTGGGGTT...GTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR CAA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTGGGCACTATTATAAGTaGTGGGCACAGCCTCTTAGC +
Preference number: 5 (lower is better)
Translates to: IASIPEAPGATPQSHCCTGHYYK*WAQPLS
Trigger: GCTAAGAGGCTGTGCCCACAACTTATAATAGTGCCC...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTACATCAGTCATGGGATaGGATTGGCATGCTAGCAGG +
Preference number: 5 (lower is better)
Translates to: IASIPEAPGATPQSHCCTTSVMG*DWHASR
Trigger: CCTGCTAGCATGCCAATCCAATCCCATGACTGATGT...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTTTGCTAACATTGTATTaGGGGCAATGCCTGCACTGG +
Preference number: 5 (lower is better)
Translates to: IASIPEAPGATPQSHCCTLLTLY*GQCLHW
Trigger: CCAGTGCAGGCATTGCCCCAAATACAATGTTAGCAA...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTACAAGAAATAGAACATaGCCAGCATCCCAGAAGCAC +
Preference number: 5 (lower is better)
Translates to: IASIPEAPGATPQSHCCTTRNRT*PASQKH
Trigger: GTGCTTCTGGGATGCTGGCAATGTTCTATTTCTTGT...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTCTGTTGGCTGGTGATTaGAGCTTTTTGTTGCATCAT +
Preference number: 5 (lower is better)
Translates to: IASIPEAPGATPQSHCCTLLAGD*SFLLHH
Trigger: ATGATGCAACAAAAAGCTCAAATCACCAGCCAACAG...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp AGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCATTGCTAACATTGTATTaGGGGCAATGCCTGCACTGG +
Preference number: 5 (lower is better)
Translates to: SCGHSLLAINPGMAARTPLLTLY*GQCLHW
Trigger: CCAGTGCAGGCATTGCCCCAAATACAATGTTAGCAA...TGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CAA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTGAAGTCCATCACAGCTaGTCTATTGGGAAGAATTTG +
Preference number: 5 (lower is better)
Translates to: IASIPEAPGATPQSHCCTEVHHS*SIGKNL
Trigger: CAAATTCTTCCCAATAGACAAGCTGTGATGGACTTC...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTCTAATGGGTAAATCCTaGATGAAGTCCATCACAGCT +
Preference number: 5 (lower is better)
Translates to: IASIPEAPGATPQSHCCTLMGKS*MKSITA
Trigger: AGCTGTGATGGACTTCATCAAGGATTTACCCATTAG...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTAAGCAATGCCCTCTGTaGGTAAAGTTCTGTACATGT +
Preference number: 5 (lower is better)
Translates to: IASIPEAPGATPQSHCCTKQCPL*VKFCTC
Trigger: ACATGTACAGAACTTTACCAACAGAGGGCATTGCTT...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp GACAGGGCTTGGTTTCCAGCCTGTAAAAAGCCAATAATGCTCCTTTGTTGGTGTCCCTCGTCAGGTGTGTaGAACCTAGACCCAAGGAGA +
Preference number: 5 (lower is better)
Translates to: DRAWFPACKKPIMLLCWCPSSGV*NLDPRR
Trigger: TCTCCTTGGGTCTAGGTTCAACACACCTGACGAGGG...ACACCAACAAAGGAGCATTATTGGCTTTTTACAGGCTGGAAACCAAGCCCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTAATAATGCTCCTTTGTaGGTGTTTCCTGTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: IASIPEAPGATPQSHCCTNNAPL*VFPVLF
Trigger: GAAGAGGACAGGAAACACCAACAAAGGAGCATTATT...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp TCAGTTTTCTCTAATGTACACTCAGTGGCTGACAGGGCTTGGTTTCCAGCCTGTCAGACTGATGCACCCTaGAGCCCTAAAGCAAACAGG +
Preference number: 5 (lower is better)
Translates to: SVFSNVHSVADRAWFPACQTDAP*SPKANR
Trigger: CCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTG...ACAGGCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAGAGAAAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTGGCATGTGTGAATCTTaGAGAGCCCTTACAAATGTT +
Preference number: 5 (lower is better)
Translates to: IASIPEAPGATPQSHCCTGMCES*RALTNV
Trigger: AACATTTGTAAGGGCTCTCAAAGATTCACACATGCC...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp CTTTGTTGGTGTTTCCTGTCCTCTTCATTGGGAAAACTAGATATCCGAACACCCCAGGGTCTCACCATGTaGGCGAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: LCWCFLSSSLGKLDIRTPQGLTM*ARLVSN
Trigger: GTTTGAGACCAGCCTCGCCAACATGGTGAGACCCTG...GGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAAACACCAACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514141.5
CDS-3UTR CAA 90 bp CCTCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAAGATACTGAACCCCAGCCCATGGTaGAGGCGGAAGCGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: PLWHMMFMLNRKVQLKILNPSPW*RRKRPD
Trigger: ATCTGGCCGCTTCCGCCTCAACCATGGGCTGGGGTT...CAGTATCTTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505774.5
CDS-3UTR CAA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTATGTGCACTATGGTATaGCTCAAATTTCGGCTTTGT +
Preference number: 5 (lower is better)
Translates to: IASIPEAPGATPQSHCCTMCTMV*LKFRLC
Trigger: ACAAAGCCGAAATTTGAGCAATACCATAGTGCACAT...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp ATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACAGGGCACTATTATAAGTaGTGGGCACAGCCTCTTAGC +
Preference number: 5 (lower is better)
Translates to: ISCGHSLLAINPGMAARTGHYYK*WAQPLS
Trigger: GCTAAGAGGCTGTGCCCACAACTTATAATAGTGCCC...TGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR CAA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTATACTTTTGCTAACATaGTATTTGGGGCAATGCCTG +
Preference number: 5 (lower is better)
Translates to: IASIPEAPGATPQSHCCTILLLT*YLGQCL
Trigger: CAGGCATTGCCCCAAATACAATGTTAGCAAAAGTAT...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp GTAGATCCTGAGCAAGCTCACTGCAAAGTTCTTGACATAGGCTGTATTGCTCTTCCCTCGTCAGGTGTGTaGAACCTAGACCCAAGGAGA +
Preference number: 5 (lower is better)
Translates to: VDPEQAHCKVLDIGCIALPSSGV*NLDPRR
Trigger: TCTCCTTGGGTCTAGGTTCAACACACCTGACGAGGG...AAGAGCAATACAGCCTATGTCAAGAACTTTGCAGTGAGCTTGCTCAGGATCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CAA 90 bp GACAGGGCTTGGTTTCCAGCCTGTAAAAAGCCAATAATGCTCCTTTGTTGGTGTCAGACTGATGCACCCTaGAGCCCTAAAGCAAACAGG +
Preference number: 5 (lower is better)
Translates to: DRAWFPACKKPIMLLCWCQTDAP*SPKANR
Trigger: CCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTG...ACACCAACAAAGGAGCATTATTGGCTTTTTACAGGCTGGAAACCAAGCCCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTTTGATGTTGAGTACTTaGTCATCAATCCTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: IASIPEAPGATPQSHCCTLMLST*SSILAF
Trigger: AAAGGCCAGGATTGATGACAAAGTACTCAACATCAA...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp TCAGTTTTCTCTAATGTACACTCAGTGGCTGACAGGGCTTGGTTTCCAGCCTGTACATCAGTCATGGGATaGGATTGGCATGCTAGCAGG +
Preference number: 5 (lower is better)
Translates to: SVFSNVHSVADRAWFPACTSVMG*DWHASR
Trigger: CCTGCTAGCATGCCAATCCAATCCCATGACTGATGT...ACAGGCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAGAGAAAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514141.5
CDS-3UTR CAA 90 bp ATTGCCAGCATCCCAGAAGCACCAGGTGCCACTCCCCAATCACACTGCTGTACTGGGACAGCAAAACACTaGCTTTTCTTTACAGTTGTA +
Preference number: 5 (lower is better)
Translates to: IASIPEAPGATPQSHCCTGTAKH*LFFTVV
Trigger: TACAACTGTAAAGAAAAGCAAGTGTTTTGCTGTCCC...AGTACAGCAGTGTGATTGGGGAGTGGCACCTGGTGCTTCTGGGATGCTGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp GGGCACTATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTTCTTCAAAGTTCACTaGGAAAGGATCTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: GHYYKLWAQPLSNKSWHGFFKVH*ERISWG
Trigger: CCCCCAGGAGATCCTTTCCAAGTGAACTTTGAAGAA...GCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CAA 90 bp CTAGATATCCGAACACCCATAAGCCTTAATCTCAAGGGATGTGGAAAATCAGCACCCTCGTCAGGTGTGTaGAACCTAGACCCAAGGAGA +
Preference number: 5 (lower is better)
Translates to: LDIRTPISLNLKGCGKSAPSSGV*NLDPRR
Trigger: TCTCCTTGGGTCTAGGTTCAACACACCTGACGAGGG...TGCTGATTTTCCACATCCCTTGAGATTAAGGCTTATGGGTGTTCGGATATCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp ACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACCCCTCGTCAGGTGTGTaGAACCTAGACCCAAGGAGA +
Preference number: 5 (lower is better)
Translates to: TLSSILAFLFLLQPSVLHPSSGV*NLDPRR
Trigger: TCTCCTTGGGTCTAGGTTCAACACACCTGACGAGGG...GTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR CAA 90 bp ATCTACATGTTTATTCAAGGCTTCCAGACTGATGCACCCTTGAGCCCTAAAGCACAGACTGATGCACCCTaGAGCCCTAAAGCAAACAGG +
Preference number: 5 (lower is better)
Translates to: IYMFIQGFQTDAPLSPKAQTDAP*SPKANR
Trigger: CCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTG...TGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAAGCCTTGAATAAACATGTAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp AATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCATGGCTGACTGCAGCTTaGACCTCCCAGGTTCAAGTA +
Preference number: 5 (lower is better)
Translates to: NPGLFVLVTAFCTPLELPWLTAA*TSQVQV
Trigger: TACTTGAACCTGGGAGGTCAAAGCTGCAGTCAGCCA...TGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514141.5
CDS-3UTR CAA 90 bp TGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATCTGTGGAAAGAAAACCCTaGGCACTAGTAGCTCACAAA +
Preference number: 5 (lower is better)
Translates to: WAQPLSNKSWHGCTNTKSVERKP*ALVAHK
Trigger: TTTGTGAGCTACTAGTGCCAAGGGTTTTCTTTCCAC...AGATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR CAA 90 bp AAAGTTCACTTGGAAAGGATCTCCTGGGGGCTGCACATCAGAAGGACTCTCTTCTCCTTCAATTCTGGATaGTCCCTCATTTCTACAGCT +
Preference number: 5 (lower is better)
Translates to: KVHLERISWGLHIRRTLFSFNSG*SLISTA
Trigger: AGCTGTAGAAATGAGGGACAATCCAGAATTGAAGGA...GAAGAGAGTCCTTCTGATGTGCAGCCCCCAGGAGATCCTTTCCAAGTGAACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CAA 90 bp GCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCGGGCACTATTATAAGTaGTGGGCACAGCCTCTTAGC +
Preference number: 5 (lower is better)
Translates to: AFLFLLQPSVLHLSYQYFGHYYK*WAQPLS
Trigger: GCTAAGAGGCTGTGCCCACAACTTATAATAGTGCCC...GAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp GACAGGGCTTGGTTTCCAGCCTGTAAAAAGCCAATAATGCTCCTTTGTTGGTGTTTCTTCAAAGTTCACTaGGAAAGGATCTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: DRAWFPACKKPIMLLCWCFFKVH*ERISWG
Trigger: CCCCCAGGAGATCCTTTCCAAGTGAACTTTGAAGAA...ACACCAACAAAGGAGCATTATTGGCTTTTTACAGGCTGGAAACCAAGCCCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp GGCACTATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTTTGCTAACATTGTATTaGGGGCAATGCCTGCACTGG +
Preference number: 5 (lower is better)
Translates to: GTIISCGHSLLAINPGMALLTLY*GQCLHW
Trigger: CCAGTGCAGGCATTGCCCCAAATACAATGTTAGCAA...AGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CAA 90 bp AAAGTTCACTTGGAAAGGATCTCCTGGGGGCTGCACATCAGAAGGACTCTCTTCCTAATGGGTAAATCCTaGATGAAGTCCATCACAGCT +
Preference number: 5 (lower is better)
Translates to: KVHLERISWGLHIRRTLFLMGKS*MKSITA
Trigger: AGCTGTGATGGACTTCATCAAGGATTTACCCATTAG...GAAGAGAGTCCTTCTGATGTGCAGCCCCCAGGAGATCCTTTCCAAGTGAACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CAA 90 bp ACTATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACCTTCTGTACTCCACTaGAGCTACCAGTACTTCTGG +
Preference number: 5 (lower is better)
Translates to: TIISCGHSLLAINPGMAAPSVLH*SYQYFW
Trigger: CCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAGG...TGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505975.5
CDS-3UTR CAA 90 bp GCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCCCTTCTGTACTCCACTaGAGCTACCAGTACTTCTGG +
Preference number: 5 (lower is better)
Translates to: AFLFLLQPSVLHLSYQYFPSVLH*SYQYFW
Trigger: CCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAGG...GAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCCAGGGTCTCACCATGTaGGCGAGGCTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: GTNFSTVIVFNVRADIITQGLTM*ARLVSN
Trigger: GTTTGAGACCAGCCTCGCCAACATGGTGAGACCCTG...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp GGGGGCACTATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGCTATTGCCTAATCCCTaGTACACACAAAACCACTGC +
Preference number: 5 (lower is better)
Translates to: GGTIISCGHSLLAINPGMLLPNP*YTQNHC
Trigger: GCAGTGGTTTTGTGTGTACAAGGGATTAGGCAATAG...CATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTGCCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR CAA 90 bp GCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAATCTCCTTGTCACACTTCTCCTTaGTGCTATCCATGGTATAAA +
Preference number: 5 (lower is better)
Translates to: AQPLSNKSWHGCTNTKSPCHTSP*CYPWYK
Trigger: TTTATACCATGGATAGCACAAAGGAGAAGTGTGACA...AGGAGATTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR CAA 90 bp TTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAAATGTGCACTATGGTATaGCTCAAATTTCGGCTTTGT +
Preference number: 5 (lower is better)
Translates to: LWAQPLSNKSWHGCTNTKMCTMV*LKFRLC
Trigger: ACAAAGCCGAAATTTGAGCAATACCATAGTGCACAT...TTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR CAA 90 bp GCACTGGCTGTCAGTGTTGTTTTCTGCTCAATTCTGAAACGAATTTCCTTTACCGGGCACTATTATAAGTaGTGGGCACAGCCTCTTAGC +
Preference number: 5 (lower is better)
Translates to: ALAVSVVFCSILKRISFTGHYYK*WAQPLS
Trigger: GCTAAGAGGCTGTGCCCACAACTTATAATAGTGCCC...GGTAAAGGAAATTCGTTTCAGAATTGAGCAGAAAACAACACTGACAGCCAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CAA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCCCCTCGTCAGGTGTGTaGAACCTAGACCCAAGGAGA +
Preference number: 5 (lower is better)
Translates to: GTNFSTVIVFNVRADIITPSSGV*NLDPRR
Trigger: TCTCCTTGGGTCTAGGTTCAACACACCTGACGAGGG...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTCCCTCGTCAGGTGTGTaGAACCTAGACCCAAGGAGA +
Preference number: 5 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELPSSGV*NLDPRR
Trigger: TCTCCTTGGGTCTAGGTTCAACACACCTGACGAGGG...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TCAGTTTTCTCTAATGTACACTCAGTGGCTGACAGGGCTTGGTTTCCAGCCTGTACATCCACATGCACATaGAACAGGGTTAGATCTGAA +
Preference number: 5 (lower is better)
Translates to: SVFSNVHSVADRAWFPACTSTCT*NRVRSE
Trigger: TTCAGATCTAACCCTGTTCAATGTGCATGTGGATGT...ACAGGCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAGAGAAAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp CTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTCCTTCTGTACTCCACTaGAGCTACCAGTACTTCTGG +
Preference number: 5 (lower is better)
Translates to: LCHQSWPFCSCYSLLYSTPSVLH*SYQYFW
Trigger: CCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAGG...AGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAACACCAAAAAAAATAGCCTCCTATaGCCTAATCCCTTGTACACA +
Preference number: 5 (lower is better)
Translates to: LWAQPLSNKSWHGCTNTKKNSLL*PNPLYT
Trigger: TGTGTACAAGGGATTAGGCAATAGGAGGCTATTTTT...TTTGGTGTTCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAA
46% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR CAA 90 bp CACTATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCTCCTTCAATTCTGGATaGTCCCTCATTTCTACAGCT +
Preference number: 5 (lower is better)
Translates to: HYYKLWAQPLSNKSWHGCSFNSG*SLISTA
Trigger: AGCTGTAGAAATGAGGGACAATCCAGAATTGAAGGA...GCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR CAA 90 bp TATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGTCCTTCAATTCTGGATaGTCCCTCATTTCTACAGCT +
Preference number: 5 (lower is better)
Translates to: YYKLWAQPLSNKSWHGCTSFNSG*SLISTA
Trigger: AGCTGTAGAAATGAGGGACAATCCAGAATTGAAGGA...CGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505975.5
ENST00000511527.5
ENST00000514296.5
CDS-3UTR CAA 90 bp CTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTTCTTCAAAGTTCACTaGGAAAGGATCTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: LCHQSWPFCSCYSLLYSTFFKVH*ERISWG
Trigger: CCCCCAGGAGATCCTTTCCAAGTGAACTTTGAAGAA...AGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR CAA 90 bp GATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTGCTAACATTGTATTaGGGGCAATGCCTGCACTGG +
Preference number: 5 (lower is better)
Translates to: DLKSFVLRYKQDKLELGLLLTLY*GQCLHW
Trigger: CCAGTGCAGGCATTGCCCCAAATACAATGTTAGCAA...CAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TCAGTTTTCTCTAATGTACACTCAGTGGCTGACAGGGCTTGGTTTCCAGCCTGTATACTTTTGCTAACATaGTATTTGGGGCAATGCCTG +
Preference number: 5 (lower is better)
Translates to: SVFSNVHSVADRAWFPACILLLT*YLGQCL
Trigger: CAGGCATTGCCCCAAATACAATGTTAGCAAAAGTAT...ACAGGCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAGAGAAAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGAAGCAATGCCCTCTGTaGGTAAAGTTCTGTACATGT +
Preference number: 5 (lower is better)
Translates to: YYKLWAQPLSNKSWHGCTKQCPL*VKFCTC
Trigger: ACATGTACAGAACTTTACCAACAGAGGGCATTGCTT...CGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CAA 90 bp ATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGAAGCAATGCCCTCTGTaGGTAAAGTTCTGTACATGT +
Preference number: 5 (lower is better)
Translates to: ILAFLFLLQPSVLHLSYQKQCPL*VKFCTC
Trigger: ACATGTACAGAACTTTACCAACAGAGGGCATTGCTT...CTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp ATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCACGATCAATCCTGGCCTTTTaGTTCTTGTTACAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: IISCGHSLLAINPGMAARSILAF*FLLQPS
Trigger: AGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGA...TCGTGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CAA 90 bp TTCCAGACTGATGCACCCTTGAGCCCTAAAGCAAACAGGACAGGTAAGTATCTGTTGATGTTGAGTACTTaGTCATCAATCCTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: FQTDAPLSPKANRTGKYLLMLST*SSILAF
Trigger: AAAGGCCAGGATTGATGACAAAGTACTCAACATCAA...CAGATACTTACCTGTCCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS GCA 90 bp AAACTAGATATCCGAACACCTGCACTGGCTGTCAGTGTTGTTTTCTaGTCAATTCTGAAACGAATTTCCTTTACCACTTCCTGGGCTGAT +
Preference number: 5 (lower is better)
Translates to: KLDIRTPALAVSVVF*SILKRISFTTSWAD
Trigger: ATCAGCCCAGGAAGTGGTAAAGGAAATTCGTTTCAGAATTGAGCAGAAAACAACACTGACAGCCAGTGCAGGTGTTCGGATATCTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508526.5
CDS-3UTR CAA 90 bp ATCTACATGTTTATTCAAGGCTTCCAGACTGATGCACCCTTGAGCCCTAAAGCATCCTTCAATTCTGGATaGTCCCTCATTTCTACAGCT +
Preference number: 5 (lower is better)
Translates to: IYMFIQGFQTDAPLSPKASFNSG*SLISTA
Trigger: AGCTGTAGAAATGAGGGACAATCCAGAATTGAAGGA...TGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAAGCCTTGAATAAACATGTAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGGCACTATTATAAGTaGTGGGCACAGCCTCTTAGC +
Preference number: 5 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELGHYYK*WAQPLS
Trigger: GCTAAGAGGCTGTGCCCACAACTTATAATAGTGCCC...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp CACTATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCATACTTTTGCTAACATaGTATTTGGGGCAATGCCTG +
Preference number: 5 (lower is better)
Translates to: HYYKLWAQPLSNKSWHGCILLLT*YLGQCL
Trigger: CAGGCATTGCCCCAAATACAATGTTAGCAAAAGTAT...GCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CAA 90 bp TCAGTTTTCTCTAATGTACACTCAGTGGCTGACAGGGCTTGGTTTCCAGCCTGTTATCACTGCATACTTTaGCTAACATTGTATTTGGGG +
Preference number: 5 (lower is better)
Translates to: SVFSNVHSVADRAWFPACYHCIL*LTLYLG
Trigger: CCCCAAATACAATGTTAGCAAAAGTATGCAGTGATA...ACAGGCTGGAAACCAAGCCCTGTCAGCCACTGAGTGTACATTAGAGAAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp ATCTACATGTTTATTCAAGGCTTCCAGACTGATGCACCCTTGAGCCCTAAAGCAGAAGTCCATCACAGCTaGTCTATTGGGAAGAATTTG +
Preference number: 5 (lower is better)
Translates to: IYMFIQGFQTDAPLSPKAEVHHS*SIGKNL
Trigger: CAAATTCTTCCCAATAGACAAGCTGTGATGGACTTC...TGCTTTAGGGCTCAAGGGTGCATCAGTCTGGAAGCCTTGAATAAACATGTAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp ACTATTATAAGTTGTGGGCACAGCCTCTTAGCAATAAATCCTGGCATGGCTGCAGAAGTCCATCACAGCTaGTCTATTGGGAAGAATTTG +
Preference number: 5 (lower is better)
Translates to: TIISCGHSLLAINPGMAAEVHHS*SIGKNL
Trigger: CAAATTCTTCCCAATAGACAAGCTGTGATGGACTTC...TGCAGCCATGCCAGGATTTATTGCTAAGAGGCTGTGCCCACAACTTATAATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CAA 90 bp GCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCAAGCAATGCCCTCTGTaGGTAAAGTTCTGTACATGT +
Preference number: 5 (lower is better)
Translates to: AFLFLLQPSVLHLSYQYFKQCPL*VKFCTC
Trigger: ACATGTACAGAACTTTACCAACAGAGGGCATTGCTT...GAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCCCTTCTGTACTCCACTaGAGCTACCAGTACTTCTGG +
Preference number: 5 (lower is better)
Translates to: GTNFSTVIVFNVRADIITPSVLH*SYQYFW
Trigger: CCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAGG...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTCCTTCTGTACTCCACTaGAGCTACCAGTACTTCTGG +
Preference number: 5 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELPSVLH*SYQYFW
Trigger: CCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAGG...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp GACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCACCTTCTGTACTCCACTaGAGCTACCAGTACTTCTGG +
Preference number: 5 (lower is better)
Translates to: DLLGRLEHSSLLCLLLKAPSVLH*SYQYFW
Trigger: CCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAGG...TGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TGTTTCCTGTCCTCTTCATTGGGAAAACTAGATATCCGAACACCCATAAGCCTTTCCTTCAATTCTGGATaGTCCCTCATTTCTACAGCT +
Preference number: 5 (lower is better)
Translates to: CFLSSSLGKLDIRTPISLSFNSG*SLISTA
Trigger: AGCTGTAGAAATGAGGGACAATCCAGAATTGAAGGA...AAGGCTTATGGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp ACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTCCTTCAATTCTGGATaGTCCCTCATTTCTACAGCT +
Preference number: 5 (lower is better)
Translates to: TLSSILAFLFLLQPSVLHSFNSG*SLISTA
Trigger: AGCTGTAGAAATGAGGGACAATCCAGAATTGAAGGA...GTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR CAA 90 bp ACATTGAACAGGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAGGGCACTATTATAAGTaGTGGGCACAGCCTCTTAGC +
Preference number: 5 (lower is better)
Translates to: TLNRVRSEVFCSTLQTGQGHYYK*WAQPLS
Trigger: GCTAAGAGGCTGTGCCCACAACTTATAATAGTGCCC...TTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCCTGTTCAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp CTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCATCTATGGGGCACTATTATAAGTaGTGGGCACAGCCTCTTAGC +
Preference number: 5 (lower is better)
Translates to: LGRLEHSSLLCLLLKASMGHYYK*WAQPLS
Trigger: GCTAAGAGGCTGTGCCCACAACTTATAATAGTGCCC...CATAGATGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCTTCTTCAAAGTTCACTaGGAAAGGATCTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: GTNFSTVIVFNVRADIITFFKVH*ERISWG
Trigger: CCCCCAGGAGATCCTTTCCAAGTGAACTTTGAAGAA...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp TCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTTTCTTCAAAGTTCACTaGGAAAGGATCTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: SFVLRYKQDKLELGLFSLFFKVH*ERISWG
Trigger: CCCCCAGGAGATCCTTTCCAAGTGAACTTTGAAGAA...AAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp GCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCATACTTTTGCTAACATaGTATTTGGGGCAATGCCTG +
Preference number: 5 (lower is better)
Translates to: AFLFLLQPSVLHLSYQYFILLLT*YLGQCL
Trigger: CAGGCATTGCCCCAAATACAATGTTAGCAAAAGTAT...GAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp CTAGATATCCGAACACCCATAAGCCTTAATCTCAAGGGATGTGGAAAATCAGCAGAAGTCCATCACAGCTaGTCTATTGGGAAGAATTTG +
Preference number: 5 (lower is better)
Translates to: LDIRTPISLNLKGCGKSAEVHHS*SIGKNL
Trigger: CAAATTCTTCCCAATAGACAAGCTGTGATGGACTTC...TGCTGATTTTCCACATCCCTTGAGATTAAGGCTTATGGGTGTTCGGATATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCTGGCTAATGGGTAAATCCTaGATGAAGTCCATCACAGCT +
Preference number: 5 (lower is better)
Translates to: FLFLLQPSVLHLSYQYFWLMGKS*MKSITA
Trigger: AGCTGTGATGGACTTCATCAAGGATTTACCCATTAG...CCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp CTAGATATCCGAACACCCATAAGCCTTAATCTCAAGGGATGTGGAAAATCAGCACTAATGGGTAAATCCTaGATGAAGTCCATCACAGCT +
Preference number: 5 (lower is better)
Translates to: LDIRTPISLNLKGCGKSALMGKS*MKSITA
Trigger: AGCTGTGATGGACTTCATCAAGGATTTACCCATTAG...TGCTGATTTTCCACATCCCTTGAGATTAAGGCTTATGGGTGTTCGGATATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCTGGAAGCAATGCCCTCTGTaGGTAAAGTTCTGTACATGT +
Preference number: 5 (lower is better)
Translates to: FLFLLQPSVLHLSYQYFWKQCPL*VKFCTC
Trigger: ACATGTACAGAACTTTACCAACAGAGGGCATTGCTT...CCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp CTAGATATCCGAACACCCATAAGCCTTAATCTCAAGGGATGTGGAAAATCAGCAAATAATGCTCCTTTGTaGGTGTTTCCTGTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LDIRTPISLNLKGCGKSANNAPL*VFPVLF
Trigger: GAAGAGGACAGGAAACACCAACAAAGGAGCATTATT...TGCTGATTTTCCACATCCCTTGAGATTAAGGCTTATGGGTGTTCGGATATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TCTTCCTTGCTATGCTTATTACTTAAAGCATCTATGCTTTCTGCTTTAGATGAGCAGACTGATGCACCCTaGAGCCCTAAAGCAAACAGG +
Preference number: 5 (lower is better)
Translates to: SSLLCLLLKASMLSALDEQTDAP*SPKANR
Trigger: CCTGTTTGCTTTAGGGCTCAAGGGTGCATCAGTCTG...CTCATCTAAAGCAGAAAGCATAGATGCTTTAAGTAATAAGCATAGCAAGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp CTAGATATCCGAACACCCATAAGCCTTAATCTCAAGGGATGTGGAAAATCAGCAACATCCACATGCACATaGAACAGGGTTAGATCTGAA +
Preference number: 5 (lower is better)
Translates to: LDIRTPISLNLKGCGKSATSTCT*NRVRSE
Trigger: TTCAGATCTAACCCTGTTCAATGTGCATGTGGATGT...TGCTGATTTTCCACATCCCTTGAGATTAAGGCTTATGGGTGTTCGGATATCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp GATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTCAATCCTGGCCTTTTaGTTCTTGTTACAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: DLKSFVLRYKQDKLELGLSILAF*FLLQPS
Trigger: AGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGA...CAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCTGGTCAATCCTGGCCTTTTaGTTCTTGTTACAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: FLFLLQPSVLHLSYQYFWSILAF*FLLQPS
Trigger: AGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGA...CCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp ACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTCAATCCTGGCCTTTTaGTTCTTGTTACAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: TLSSILAFLFLLQPSVLHSILAF*FLLQPS
Trigger: AGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGA...GTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR CAA 90 bp TTAAAACTTGGAATGGTTGTGATGTCTGGAAACTTTGTTTATTCACGGCTTCACTACAGTGGCAAGATCTaGGCTGACTGCAGCTTTGAC +
Preference number: 5 (lower is better)
Translates to: LKLGMVVMSGNFVYSRLHYSGKI*ADCSFD
Trigger: GTCAAAGCTGCAGTCAGCCAAGATCTTGCCACTGTA...GTGAAGCCGTGAATAAACAAAGTTTCCAGACATCACAACCATTCCAAGTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514141.5
CDS GCA 90 bp CTAATACTCAAGTTATTACCTGCACTGGCTGTCAGTGTTGTTTTCTaGTCAATTCTGAAACGAATTTCCTTTACCACTTCCTGGGCTGAT +
Preference number: 5 (lower is better)
Translates to: LILKLLPALAVSVVF*SILKRISFTTSWAD
Trigger: ATCAGCCCAGGAAGTGGTAAAGGAAATTCGTTTCAGAATTGAGCAGAAAACAACACTGACAGCCAGTGCAGGTAATAACTTGAGTATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506928.5
CDS-3UTR CAA 90 bp TTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCTGGATGTGCACTATGGTATaGCTCAAATTTCGGCTTTGT +
Preference number: 5 (lower is better)
Translates to: FLFLLQPSVLHLSYQYFWMCTMV*LKFRLC
Trigger: ACAAAGCCGAAATTTGAGCAATACCATAGTGCACAT...CCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TGTTTCCTGTCCTCTTCATTGGGAAAACTAGATATCCGAACACCCATAAGCCTTATGTGCACTATGGTATaGCTCAAATTTCGGCTTTGT +
Preference number: 5 (lower is better)
Translates to: CFLSSSLGKLDIRTPISLMCTMV*LKFRLC
Trigger: ACAAAGCCGAAATTTGAGCAATACCATAGTGCACAT...AAGGCTTATGGGTGTTCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp CTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTATGTGCACTATGGTATaGCTCAAATTTCGGCTTTGT +
Preference number: 5 (lower is better)
Translates to: LCHQSWPFCSCYSLLYSTMCTMV*LKFRLC
Trigger: ACAAAGCCGAAATTTGAGCAATACCATAGTGCACAT...AGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR CAA 90 bp TTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACTCCTTCAATTCTGGATaGTCCCTCATTTCTACAGCT +
Preference number: 5 (lower is better)
Translates to: FVLRYKQDKLELGLFSLHSFNSG*SLISTA
Trigger: AGCTGTAGAAATGAGGGACAATCCAGAATTGAAGGA...GTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TTAAAAGACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTGGGCACTATTATAAGTaGTGGGCACAGCCTCTTAGC +
Preference number: 5 (lower is better)
Translates to: LKDLLGRLEHSSLLCLLLGHYYK*WAQPLS
Trigger: GCTAAGAGGCTGTGCCCACAACTTATAATAGTGCCC...AAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TGGCGGTATTCTTGTCTAAATGATCCAACATCTTCGTTTTCCAATGAAACAGTATTCTTCAAAGTTCACTaGGAAAGGATCTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: WRYSCLNDPTSSFSNETVFFKVH*ERISWG
Trigger: CCCCCAGGAGATCCTTTCCAAGTGAACTTTGAAGAA...TACTGTTTCATTGGAAAACGAAGATGTTGGATCATTTAGACAAGAATACCGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp CTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCATCTATGTTCTTCAAAGTTCACTaGGAAAGGATCTCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: LGRLEHSSLLCLLLKASMFFKVH*ERISWG
Trigger: CCCCCAGGAGATCCTTTCCAAGTGAACTTTGAAGAA...CATAGATGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp ACTTGGAATGGTTGTGATGTCTGGAAACTTTGTTTATTCACGGCTTCACATTTATTGCTAACATTGTATTaGGGGCAATGCCTGCACTGG +
Preference number: 5 (lower is better)
Translates to: TWNGCDVWKLCLFTASHLLLTLY*GQCLHW
Trigger: CCAGTGCAGGCATTGCCCCAAATACAATGTTAGCAA...TAAATGTGAAGCCGTGAATAAACAAAGTTTCCAGACATCACAACCATTCCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp CTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTATACTTTTGCTAACATaGTATTTGGGGCAATGCCTG +
Preference number: 5 (lower is better)
Translates to: LCHQSWPFCSCYSLLYSTILLLT*YLGQCL
Trigger: CAGGCATTGCCCCAAATACAATGTTAGCAAAAGTAT...AGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR CAA 90 bp TTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACCTAATGGGTAAATCCTaGATGAAGTCCATCACAGCT +
Preference number: 5 (lower is better)
Translates to: FVLRYKQDKLELGLFSLHLMGKS*MKSITA
Trigger: AGCTGTGATGGACTTCATCAAGGATTTACCCATTAG...GTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp CCTCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAAGATACTGTTCCTGTCCTCTTCATaGGGAAAACTAGATATCCGA +
Preference number: 5 (lower is better)
Translates to: PLWHMMFMLNRKVQLKILFLSSS*GKLDIR
Trigger: TCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAA...CAGTATCTTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505975.5
CDS-3UTR CAA 90 bp TACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCAAATAATGCTCCTTTGTaGGTGTTTCCTGTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: YFVINPGLFVLVTAFCTPNNAPL*VFPVLF
Trigger: GAAGAGGACAGGAAACACCAACAAAGGAGCATTATT...TGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACATACATCCACATGCACATaGAACAGGGTTAGATCTGAA +
Preference number: 5 (lower is better)
Translates to: CSTLQTGQTRAWPVFTSHTSTCT*NRVRSE
Trigger: TTCAGATCTAACCCTGTTCAATGTGCATGTGGATGT...ATGTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp GATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTGATGTTGAGTACTTaGTCATCAATCCTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: DLKSFVLRYKQDKLELGLLMLST*SSILAF
Trigger: AAAGGCCAGGATTGATGACAAAGTACTCAACATCAA...CAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp ACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTGATGTTGAGTACTTaGTCATCAATCCTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: TLSSILAFLFLLQPSVLHLMLST*SSILAF
Trigger: AAAGGCCAGGATTGATGACAAAGTACTCAACATCAA...GTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR CAA 90 bp TGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTCACATGGCATGTGTGAATCTTaGAGAGCCCTTACAAATGTT +
Preference number: 5 (lower is better)
Translates to: CSTLQTGQTRAWPVFTSHGMCES*RALTNV
Trigger: AACATTTGTAAGGGCTCTCAAAGATTCACACATGCC...ATGTGAAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514141.5
CDS-3UTR CAA 90 bp GTTTATCCTTCAATTCTGGATTGTCCCTCATTTCTACAGCTGCATAGAAAGCATCCTTCTGTACTCCACTaGAGCTACCTTAAGTCTTTC +
Preference number: 5 (lower is better)
Translates to: VYPSILDCPSFLQLHRKHPSVLH*SYLKSF
Trigger: GAAAGACTTAAGGTAGCTCAAGTGGAGTACAGAAGG...ATGCTTTCTATGCAGCTGTAGAAATGAGGGACAATCCAGAATTGAAGGATAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511527.5
CDS CCA 90 bp ATATATCCAACCTTTCCTATCTTTGAGGGGCAGGCATGGTTAACGTaGTTCTCAGTAAGATATTCATTTACAACCAAGAGAAAATCCCAG +
Preference number: 5 (lower is better)
Translates to: IYPTFPIFEGQAWLT*FSVRYSFTTKRKSQ
Trigger: CTGGGATTTTCTCTTGGTTGTAAATGAATATCTTACTGAGAACCACGTTAACCATGCCTGCCCCTCAAAGATAGGAAAGGTTGGATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR CAA 90 bp CTGTCAACCTCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAATGTCACACTTCTCCTTaGTGCTATCCATGGTATAAA +
Preference number: 5 (lower is better)
Translates to: LSTSLAYDVYAEQEGTTECHTSP*CYPWYK
Trigger: TTTATACCATGGATAGCACAAAGGAGAAGTGTGACA...TTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGAGGTTGACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505774.5
CDS-3UTR CAA 90 bp TGTCAACCTCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAAGATGTGCACTATGGTATaGCTCAAATTTCGGCTTTGT +
Preference number: 5 (lower is better)
Translates to: CQPLWHMMFMLNRKVQLKMCTMV*LKFRLC
Trigger: ACAAAGCCGAAATTTGAGCAATACCATAGTGCACAT...CTTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGAGGTTGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CAA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCTCCTTCAATTCTGGATaGTCCCTCATTTCTACAGCT +
Preference number: 5 (lower is better)
Translates to: GTNFSTVIVFNVRADIITSFNSG*SLISTA
Trigger: AGCTGTAGAAATGAGGGACAATCCAGAATTGAAGGA...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp TCTTCCTTGCTATGCTTATTACTTAAAGCATCTATGCTTTCTGCTTTAGATGAGTTGCTAACATTGTATTaGGGGCAATGCCTGCACTGG +
Preference number: 5 (lower is better)
Translates to: SSLLCLLLKASMLSALDELLTLY*GQCLHW
Trigger: CCAGTGCAGGCATTGCCCCAAATACAATGTTAGCAA...CTCATCTAAAGCAGAAAGCATAGATGCTTTAAGTAATAAGCATAGCAAGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp CTGTCAACCTCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAAATACTTTTGCTAACATaGTATTTGGGGCAATGCCTG +
Preference number: 5 (lower is better)
Translates to: LSTSLAYDVYAEQEGTTEILLLT*YLGQCL
Trigger: CAGGCATTGCCCCAAATACAATGTTAGCAAAAGTAT...TTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGAGGTTGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CAA 90 bp CTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTATCACAGCTTGTCTATaGGGAAGAATTTGGTATTGT +
Preference number: 5 (lower is better)
Translates to: LCHQSWPFCSCYSLLYSTITACL*GRIWYC
Trigger: ACAATACCAAATTCTTCCCAATAGACAAGCTGTGAT...AGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000511527.5
ENST00000514141.5
CDS-3UTR CAA 90 bp GTTTATCCTTCAATTCTGGATTGTCCCTCATTTCTACAGCTGCATAGAAAGCATGAAGTCCATCACAGCTaGTCTATTGGGAAGAATTTG +
Preference number: 5 (lower is better)
Translates to: VYPSILDCPSFLQLHRKHEVHHS*SIGKNL
Trigger: CAAATTCTTCCCAATAGACAAGCTGTGATGGACTTC...ATGCTTTCTATGCAGCTGTAGAAATGAGGGACAATCCAGAATTGAAGGATAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CAA 90 bp TATTGCTCTTCCGCTTTATTTATCTCACTGAATGTCCTCTCAACGCTCATACTTAAGCAATGCCCTCTGTaGGTAAAGTTCTGTACATGT +
Preference number: 5 (lower is better)
Translates to: YCSSALFISLNVLSTLILKQCPL*VKFCTC
Trigger: ACATGTACAGAACTTTACCAACAGAGGGCATTGCTT...AAGTATGAGCGTTGAGAGGACATTCAGTGAGATAAATAAAGCGGAAGAGCAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CAA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTAAGCAATGCCCTCTGTaGGTAAAGTTCTGTACATGT +
Preference number: 5 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELKQCPL*VKFCTC
Trigger: ACATGTACAGAACTTTACCAACAGAGGGCATTGCTT...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCTTCCTGTCCTCTTCATaGGGAAAACTAGATATCCGA +
Preference number: 5 (lower is better)
Translates to: GTNFSTVIVFNVRADIITFLSSS*GKLDIR
Trigger: TCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAA...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCACATCCACATGCACATaGAACAGGGTTAGATCTGAA +
Preference number: 5 (lower is better)
Translates to: GTNFSTVIVFNVRADIITTSTCT*NRVRSE
Trigger: TTCAGATCTAACCCTGTTCAATGTGCATGTGGATGT...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTACATCCACATGCACATaGAACAGGGTTAGATCTGAA +
Preference number: 5 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELTSTCT*NRVRSE
Trigger: TTCAGATCTAACCCTGTTCAATGTGCATGTGGATGT...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCTCAATCCTGGCCTTTTaGTTCTTGTTACAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: GTNFSTVIVFNVRADIITSILAF*FLLQPS
Trigger: AGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGA...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp GACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCATCAATCCTGGCCTTTTaGTTCTTGTTACAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: DLLGRLEHSSLLCLLLKASILAF*FLLQPS
Trigger: AGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGA...TGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TACTTTGTCATCAATCCTGGCCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCAAGTCTAGTTACCACTTaGTCAAAGTCTGTGAGTTCT +
Preference number: 5 (lower is better)
Translates to: YFVINPGLFVLVTAFCTPSLVTT*SKSVSS
Trigger: AGAACTCACAGACTTTGACAAAGTGGTAACTAGACT...TGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGATGACAAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514141.5
CDS-3UTR CAA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCGCATCCTTCTGTGATTaGCTTCTTTTGCTCTATGCT +
Preference number: 5 (lower is better)
Translates to: GTNFSTVIVFNVRADIITASFCD*LLLLYA
Trigger: AGCATAGAGCAAAAGAAGCAAATCACAGAAGGATGC...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp TCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAAGATACTGTAGTGGAAAGAAAACCCTaGGCACTAGTAGCTCACAAA +
Preference number: 5 (lower is better)
Translates to: SLAYDVYAEQEGTTEDTVVERKP*ALVAHK
Trigger: TTTGTGAGCTACTAGTGCCAAGGGTTTTCTTTCCAC...TACAGTATCTTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505774.5
CDS TCA 90 bp AAATCCAATGGTATGCTGTCTTCAGGAGACCCATATCACATGCAATaGCATCCACAGACTCAAAGTAAAGGGATGAAGAAAAATCTTGTT +
Preference number: 5 (lower is better)
Translates to: KSNGMLSSGDPYHMQ*HPQTQSKGMKKNLV
Trigger: AACAAGATTTTTCTTCATCCCTTTACTTTGAGTCTGTGGATGTCATTGCATGTGATATGGGTCTCCTGAAGACAGCATACCATTGGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS GCA 90 bp AAAGACAGAATGATAACTTGGATAAAGAAGCAAAATCCAATGGTATaGTGTCTTCAGGAGACCCATATCACATGCAATGACATCCACAGA +
Preference number: 5 (lower is better)
Translates to: KDRMITWIKKQNPMV*CLQETHITCNDIHR
Trigger: TCTGTGGATGTCATTGCATGTGATATGGGTCTCCTGAAGACAGCATACCATTGGATTTTGCTTCTTTATCCAAGTTATCATTCTGTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR CAA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCTGTCACACTTCTCCTTaGTGCTATCCATGGTATAAA +
Preference number: 5 (lower is better)
Translates to: GTNFSTVIVFNVRADIITCHTSP*CYPWYK
Trigger: TTTATACCATGGATAGCACAAAGGAGAAGTGTGACA...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp CCTCTTTGGCATATGATGTTTATGCTGAACAGGAAGGTACAACTGAAGATACTGATCACAGCTTGTCTATaGGGAAGAATTTGGTATTGT +
Preference number: 5 (lower is better)
Translates to: PLWHMMFMLNRKVQLKILITACL*GRIWYC
Trigger: ACAATACCAAATTCTTCCCAATAGACAAGCTGTGAT...CAGTATCTTCAGTTGTACCTTCCTGTTCAGCATAAACATCATATGCCAAAGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CAA 90 bp ACTTGGAATGGTTGTGATGTCTGGAAACTTTGTTTATTCACGGCTTCACATTTACTAATGGGTAAATCCTaGATGAAGTCCATCACAGCT +
Preference number: 5 (lower is better)
Translates to: TWNGCDVWKLCLFTASHLLMGKS*MKSITA
Trigger: AGCTGTGATGGACTTCATCAAGGATTTACCCATTAG...TAAATGTGAAGCCGTGAATAAACAAAGTTTCCAGACATCACAACCATTCCAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp ACATTGAACAGGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAATTCCTGTCCTCTTCATaGGGAAAACTAGATATCCGA +
Preference number: 5 (lower is better)
Translates to: TLNRVRSEVFCSTLQTGQFLSSS*GKLDIR
Trigger: TCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAA...TTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCCTGTTCAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TGGCGGTATTCTTGTCTAAATGATCCAACATCTTCGTTTTCCAATGAAACAGTAAATAATGCTCCTTTGTaGGTGTTTCCTGTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: WRYSCLNDPTSSFSNETVNNAPL*VFPVLF
Trigger: GAAGAGGACAGGAAACACCAACAAAGGAGCATTATT...TACTGTTTCATTGGAAAACGAAGATGTTGGATCATTTAGACAAGAATACCGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp CTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCATCTATGACATCCACATGCACATaGAACAGGGTTAGATCTGAA +
Preference number: 5 (lower is better)
Translates to: LGRLEHSSLLCLLLKASMTSTCT*NRVRSE
Trigger: TTCAGATCTAACCCTGTTCAATGTGCATGTGGATGT...CATAGATGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTTTGATGTTGAGTACTTaGTCATCAATCCTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELLMLST*SSILAF
Trigger: AAAGGCCAGGATTGATGACAAAGTACTCAACATCAA...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS CCA 90 bp AAAGTTTCTATATATCCAACCTTTCCTATCTTTGAGGGGCAGGCATaGTTAACGTGGTTCTCAGTAAGATATTCATTTACAACCAAGAGA +
Preference number: 5 (lower is better)
Translates to: KVSIYPTFPIFEGQA*LTWFSVRYSFTTKR
Trigger: TCTCTTGGTTGTAAATGAATATCTTACTGAGAACCACGTTAACCATGCCTGCCCCTCAAAGATAGGAAAGGTTGGATATATAGAAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR CAA 90 bp ACTTGGAATGGTTGTGATGTCTGGAAACTTTGTTTATTCACGGCTTCACATTTATGTCACACTTCTCCTTaGTGCTATCCATGGTATAAA +
Preference number: 5 (lower is better)
Translates to: TWNGCDVWKLCLFTASHLCHTSP*CYPWYK
Trigger: TTTATACCATGGATAGCACAAAGGAGAAGTGTGACA...TAAATGTGAAGCCGTGAATAAACAAAGTTTCCAGACATCACAACCATTCCAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514141.5
CDS-3UTR CAA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCTATCACTGCATACTTTaGCTAACATTGTATTTGGGG +
Preference number: 5 (lower is better)
Translates to: GTNFSTVIVFNVRADIITYHCIL*LTLYLG
Trigger: CCCCAAATACAATGTTAGCAAAAGTATGCAGTGATA...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp AGAAAGCATCCATGTCAATGTGCACTATGGTATTGCTCAAATTTCGGCTTTGTTTATCACTGCATACTTTaGCTAACATTGTATTTGGGG +
Preference number: 5 (lower is better)
Translates to: RKHPCQCALWYCSNFGFVYHCIL*LTLYLG
Trigger: CCCCAAATACAATGTTAGCAAAAGTATGCAGTGATA...AACAAAGCCGAAATTTGAGCAATACCATAGTGCACATTGACATGGATGCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000511527.5
CDS-3UTR CAA 90 bp GGGACAAATTTTTCCACAGTGATTGTTTTCAATGTAAGAGCTGACATCATCACCATCACAGCTTGTCTATaGGGAAGAATTTGGTATTGT +
Preference number: 5 (lower is better)
Translates to: GTNFSTVIVFNVRADIITITACL*GRIWYC
Trigger: ACAATACCAAATTCTTCCCAATAGACAAGCTGTGAT...GGTGATGATGTCAGCTCTTACATTGAAAACAATCACTGTGGAAAAATTTGTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS-3UTR CAA 90 bp TCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTGGCCTGTTTTCACTTATCACAGCTTGTCTATaGGGAAGAATTTGGTATTGT +
Preference number: 5 (lower is better)
Translates to: SFVLRYKQDKLELGLFSLITACL*GRIWYC
Trigger: ACAATACCAAATTCTTCCCAATAGACAAGCTGTGAT...AAGTGAAAACAGGCCAAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp GGGTTAGATCTGAAGTCTTTTGTTCTACGTTACAAACAGGACAAACTAGAGCTTATCACAGCTTGTCTATaGGGAAGAATTTGGTATTGT +
Preference number: 5 (lower is better)
Translates to: GLDLKSFVLRYKQDKLELITACL*GRIWYC
Trigger: ACAATACCAAATTCTTCCCAATAGACAAGCTGTGAT...AAGCTCTAGTTTGTCCTGTTTGTAACGTAGAACAAAAGACTTCAGATCTAACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TTAAAAGACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTGAAGTCCATCACAGCTaGTCTATTGGGAAGAATTTG +
Preference number: 5 (lower is better)
Translates to: LKDLLGRLEHSSLLCLLLEVHHS*SIGKNL
Trigger: CAAATTCTTCCCAATAGACAAGCTGTGATGGACTTC...AAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TCCTTAGCAATGGCAAATATTTCTTCTGCAGTAGAAACAACAGATGAAACTGTAGAAGTCCATCACAGCTaGTCTATTGGGAAGAATTTG +
Preference number: 5 (lower is better)
Translates to: SLAMANISSAVETTDETVEVHHS*SIGKNL
Trigger: CAAATTCTTCCCAATAGACAAGCTGTGATGGACTTC...TACAGTTTCATCTGTTGTTTCTACTGCAGAAGAAATATTTGCCATTGCTAAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000514141.5
CDS-3UTR CAA 90 bp TCCTTAGCAATGGCAAATATTTCTTCTGCAGTAGAAACAACAGATGAAACTGTACTAATGGGTAAATCCTaGATGAAGTCCATCACAGCT +
Preference number: 5 (lower is better)
Translates to: SLAMANISSAVETTDETVLMGKS*MKSITA
Trigger: AGCTGTGATGGACTTCATCAAGGATTTACCCATTAG...TACAGTTTCATCTGTTGTTTCTACTGCAGAAGAAATATTTGCCATTGCTAAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000514141.5
CDS-3UTR CAA 90 bp TTAAAAGACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTTTCCTGTCCTCTTCATaGGGAAAACTAGATATCCGA +
Preference number: 5 (lower is better)
Translates to: LKDLLGRLEHSSLLCLLLFLSSS*GKLDIR
Trigger: TCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAA...AAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TCTTCCTTGCTATGCTTATTACTTAAAGCATCTATGCTTTCTGCTTTAGATGAGTTCCTGTCCTCTTCATaGGGAAAACTAGATATCCGA +
Preference number: 5 (lower is better)
Translates to: SSLLCLLLKASMLSALDEFLSSS*GKLDIR
Trigger: TCGGATATCTAGTTTTCCCAATGAAGAGGACAGGAA...CTCATCTAAAGCAGAAAGCATAGATGCTTTAAGTAATAAGCATAGCAAGGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TCCTTAGCAATGGCAAATATTTCTTCTGCAGTAGAAACAACAGATGAAACTGTATCAATCCTGGCCTTTTaGTTCTTGTTACAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: SLAMANISSAVETTDETVSILAF*FLLQPS
Trigger: AGAAGGCTGTAACAAGAACAAAAAGGCCAGGATTGA...TACAGTTTCATCTGTTGTTTCTACTGCAGAAGAAATATTTGCCATTGCTAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505975.5
ENST00000514141.5
CDS-3UTR CAA 90 bp CTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCATCTATGTTGATGTTGAGTACTTaGTCATCAATCCTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: LGRLEHSSLLCLLLKASMLMLST*SSILAF
Trigger: AAAGGCCAGGATTGATGACAAAGTACTCAACATCAA...CATAGATGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS TCA 90 bp TTTCTAATACGAGAAAGTTTCTATATATCCAACCTTTCCTATCTTTaGGGGGCAGGCATGGTTAACGTGGTTCTCAGTAAGATATTCATT +
Preference number: 5 (lower is better)
Translates to: FLIRESFYISNLSYL*GAGMVNVVLSKIFI
Trigger: AATGAATATCTTACTGAGAACCACGTTAACCATGCCTGCCCCTCAAAGATAGGAAAGGTTGGATATATAGAAACTTTCTCGTATTAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS GCA 90 bp AAAAATAGCCTCCTATTGCCTAATCCCTTGTACACACAAAACCACTaGACTTCGGTATTTCTAATACGAGAAAGTTTCTATATATCCAAC +
Preference number: 5 (lower is better)
Translates to: KNSLLLPNPLYTQNH*TSVFLIRESFYISN
Trigger: GTTGGATATATAGAAACTTTCTCGTATTAGAAATACCGAAGTGCAGTGGTTTTGTGTGTACAAGGGATTAGGCAATAGGAGGCTATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS-3UTR CAA 90 bp TTCAATATTAAAAGACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATACTTTTGCTAACATaGTATTTGGGGCAATGCCTG +
Preference number: 5 (lower is better)
Translates to: FNIKRLAWETRTFFLAMLILLLT*YLGQCL
Trigger: CAGGCATTGCCCCAAATACAATGTTAGCAAAAGTAT...AAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAATATTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp CTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTAAAGCATCTATGTATCACTGCATACTTTaGCTAACATTGTATTTGGGG +
Preference number: 5 (lower is better)
Translates to: LGRLEHSSLLCLLLKASMYHCIL*LTLYLG
Trigger: CCCCAAATACAATGTTAGCAAAAGTATGCAGTGATA...CATAGATGCTTTAAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp ACTTGGAATGGTTGTGATGTCTGGAAACTTTGTTTATTCACGGCTTCACATTTATATCACTGCATACTTTaGCTAACATTGTATTTGGGG +
Preference number: 5 (lower is better)
Translates to: TWNGCDVWKLCLFTASHLYHCIL*LTLYLG
Trigger: CCCCAAATACAATGTTAGCAAAAGTATGCAGTGATA...TAAATGTGAAGCCGTGAATAAACAAAGTTTCCAGACATCACAACCATTCCAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TTAAAACTTGGAATGGTTGTGATGTCTGGAAACTTTGTTTATTCACGGCTTCACTATCACTGCATACTTTaGCTAACATTGTATTTGGGG +
Preference number: 5 (lower is better)
Translates to: LKLGMVVMSGNFVYSRLHYHCIL*LTLYLG
Trigger: CCCCAAATACAATGTTAGCAAAAGTATGCAGTGATA...GTGAAGCCGTGAATAAACAAAGTTTCCAGACATCACAACCATTCCAAGTTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TGGCGGTATTCTTGTCTAAATGATCCAACATCTTCGTTTTCCAATGAAACAGTATATCACTGCATACTTTaGCTAACATTGTATTTGGGG +
Preference number: 5 (lower is better)
Translates to: WRYSCLNDPTSSFSNETVYHCIL*LTLYLG
Trigger: CCCCAAATACAATGTTAGCAAAAGTATGCAGTGATA...TACTGTTTCATTGGAAAACGAAGATGTTGGATCATTTAGACAAGAATACCGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp ACTTGGAATGGTTGTGATGTCTGGAAACTTTGTTTATTCACGGCTTCACATTTAATCACAGCTTGTCTATaGGGAAGAATTTGGTATTGT +
Preference number: 5 (lower is better)
Translates to: TWNGCDVWKLCLFTASHLITACL*GRIWYC
Trigger: ACAATACCAAATTCTTCCCAATAGACAAGCTGTGAT...TAAATGTGAAGCCGTGAATAAACAAAGTTTCCAGACATCACAACCATTCCAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TGGCGGTATTCTTGTCTAAATGATCCAACATCTTCGTTTTCCAATGAAACAGTAATCACAGCTTGTCTATaGGGAAGAATTTGGTATTGT +
Preference number: 5 (lower is better)
Translates to: WRYSCLNDPTSSFSNETVITACL*GRIWYC
Trigger: ACAATACCAAATTCTTCCCAATAGACAAGCTGTGAT...TACTGTTTCATTGGAAAACGAAGATGTTGGATCATTTAGACAAGAATACCGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS-3UTR CAA 90 bp TTAAAAGACTTGCTTGGGAGACTAGAACATTCTTCCTTGCTATGCTTATTACTTTTGATGTTGAGTACTTaGTCATCAATCCTGGCCTTT +
Preference number: 5 (lower is better)
Translates to: LKDLLGRLEHSSLLCLLLLMLST*SSILAF
Trigger: AAAGGCCAGGATTGATGACAAAGTACTCAACATCAA...AAGTAATAAGCATAGCAAGGAAGAATGTTCTAGTCTCCCAAGCAAGTCTTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000503479.6
ENST00000505975.5
ENST00000509126.2
ENST00000510815.6
ENST00000514141.5
CDS TCA 90 bp TACAAAGCAAACTCTAGAAATCTAAAAATGCGAAGTGCGTGCTTGTaGGAAGGTACTAAGGAAATTCTTCCTTTAAACGTCAAATGTGAA +
Preference number: 5 (lower is better)
Translates to: YKANSRNLKMRSACL*EGTKEILPLNVKCE
Trigger: TTCACATTTGACGTTTAAAGGAAGAATTTCCTTAGTACCTTCTCACAAGCACGCACTTCGCATTTTTAGATTTCTAGAGTTTGCTTTGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS GCA 72 bp GGCTGCGCGAGCGACGGACCAACGCCCTTCCCAGAATaGAGCACAGCTGCATCCCTACCCCGCCCTCTCCTT +
Preference number: 6 (lower is better)
Translates to: GCASDGPTPFPE*STAASLPRPLL
Trigger: AAGGAGAGGGCGGGGTAGGGATGCAGCTGTGCTGCATTCTGGGAAGGGCGTTGGTCCGTCGCTCGCGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS GCA 72 bp CGACGGACCAACGCCCTTCCCAGAATGCAGCACAGCTaGATCCCTACCCCGCCCTCTCCTTTCTCCGCTCCT +
Preference number: 6 (lower is better)
Translates to: RRTNALPRMQHS*IPTPPSPFSAP
Trigger: AGGAGCGGAGAAAGGAGAGGGCGGGGTAGGGATGCAGCTGTGCTGCATTCTGGGAAGGGCGTTGGTCCGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241436.8
CDS GCA 72 bp AAACCCCAGCCCATGGTTGAGGCGGAAGCGGCCAGATaGTCCCGGGCTTTCGACAAGCCGCCCTGGAAAGCA +
Preference number: 6 (lower is better)
Translates to: KPQPMVEAEAAR*SRAFDKPPWKA
Trigger: TGCTTTCCAGGGCGGCTTGTCGAAAGCCCGGGAGCATCTGGCCGCTTCCGCCTCAACCATGGGCTGGGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505774.5
ENST00000514296.5
CDS CCA 72 bp GCGGCCAGATGCTCCCGGGCTTTCGACAAGCCGCCCTaGAAAGCAGGCCCGTCATCTTCAGCGGAAAGCTCT +
Preference number: 6 (lower is better)
Translates to: AARCSRAFDKPP*KAGPSSSAESS
Trigger: AGAGCTTTCCGCTGAAGATGACGGGCCTGCTTTCCAGGGCGGCTTGTCGAAAGCCCGGGAGCATCTGGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505774.5
ENST00000514296.5
CDS CCA 72 bp ACCCTTGGCACTAGTAGCTCACAAAACCCCAGCCCATaGTTGAGGCGGAAGCGGCCAGATGCTCCCGGGCTT +
Preference number: 6 (lower is better)
Translates to: TLGTSSSQNPSP*LRRKRPDAPGL
Trigger: AAGCCCGGGAGCATCTGGCCGCTTCCGCCTCAACCATGGGCTGGGGTTTTGTGAGCTACTAGTGCCAAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505774.5
ENST00000514296.5
CDS CAA 72 bp CTTGGCACTAGTAGCTCACAAAACCCCAGCCCATGGTaGAGGCGGAAGCGGCCAGATGCTCCCGGGCTTTCG +
Preference number: 6 (lower is better)
Translates to: LGTSSSQNPSPW*RRKRPDAPGLS
Trigger: CGAAAGCCCGGGAGCATCTGGCCGCTTCCGCCTCAACCATGGGCTGGGGTTTTGTGAGCTACTAGTGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505774.5
ENST00000514296.5
CDS TCA 72 bp TTGGCACTAGTAGCTCACAAAACCCCAGCCCATGGTTaGGGCGGAAGCGGCCAGATGCTCCCGGGCTTTCGA +
Preference number: 6 (lower is better)
Translates to: LALVAHKTPAHG*GGSGQMLPGFR
Trigger: TCGAAAGCCCGGGAGCATCTGGCCGCTTCCGCCTCAACCATGGGCTGGGGTTTTGTGAGCTACTAGTGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505774.5
ENST00000514296.5
CDS CAA 90 bp GTCTCTTACCTTGTGGCCGTCTGGGTTCTCTCCTGCAATGTAATCTaGGACAGGATTGAAGTCTCCCAAGGAAAAACTAATACTCAAGTT +
Preference number: 6 (lower is better)
Translates to: VSYLVAVWVLSCNVI*DRIEVSQGKTNTQV
Trigger: AACTTGAGTATTAGTTTTTCCTTGGGAGACTTCAATCCTGTCCAAGATTACATTGCAGGAGAGAACCCAGACGGCCACAAGGTAAGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508867.5
CDS TCA 72 bp CGAGAAAGTTTCTATATATCCAACCTTTCCTATCTTTaGGGGGCAGGCATGGTTAACGTGGTTCTCAGTAAG +
Preference number: 6 (lower is better)
Translates to: RESFYISNLSYL*GAGMVNVVLSK
Trigger: CTTACTGAGAACCACGTTAACCATGCCTGCCCCTCAAAGATAGGAAAGGTTGGATATATAGAAACTTTCTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS TCA 72 bp GGTATGCTGTCTTCAGGAGACCCATATCACATGCAATaGCATCCACAGACTCAAAGTAAAGGGATGAAGAAA +
Preference number: 6 (lower is better)
Translates to: GMLSSGDPYHMQ*HPQTQSKGMKK
Trigger: TTTCTTCATCCCTTTACTTTGAGTCTGTGGATGTCATTGCATGTGATATGGGTCTCCTGAAGACAGCATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS CCA 72 bp GTTAGTATTTCTTTTGTCTCTTACCTTGTGGCCGTCTaGGTTCTCTCCTGCAATGTAATCTTGGACAGGATT +
Preference number: 6 (lower is better)
Translates to: VSISFVSYLVAV*VLSCNVILDRI
Trigger: AATCCTGTCCAAGATTACATTGCAGGAGAGAACCCAGACGGCCACAAGGTAAGAGACAAAAGAAATACTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508867.5
CDS CCA 72 bp ACCTTTCCTATCTTTGAGGGGCAGGCATGGTTAACGTaGTTCTCAGTAAGATATTCATTTACAACCAAGAGA +
Preference number: 6 (lower is better)
Translates to: TFPIFEGQAWLT*FSVRYSFTTKR
Trigger: TCTCTTGGTTGTAAATGAATATCTTACTGAGAACCACGTTAACCATGCCTGCCCCTCAAAGATAGGAAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS CAA 72 bp TTGGTTTATTCTTATCACTGCATACTTTTGCTAACATaGTATTTGGGGCAATGCCTTGTGGCCGTCTGGGTT +
Preference number: 6 (lower is better)
Translates to: LVYSYHCILLLT*YLGQCLVAVWV
Trigger: AACCCAGACGGCCACAAGGCATTGCCCCAAATACAATGTTAGCAAAAGTATGCAGTGATAAGAATAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506928.5
CDS CAA 72 bp GCAGAAGATCATCTTTGTAACTGTCACACTTCTCCTTaGTGCTATCCATGGTATAAACTTATAGCGGTGGTC +
Preference number: 6 (lower is better)
Translates to: AEDHLCNCHTSP*CYPWYKLIAVV
Trigger: GACCACCGCTATAAGTTTATACCATGGATAGCACAAAGGAGAAGTGTGACAGTTACAAAGATGATCTTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505774.5
CDS CAA 90 bp GTAGCCAGCTTTATTAAAGCTCAAATTAGCCATACCTTTTTGTTCTaGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTACTTCTGG +
Preference number: 6 (lower is better)
Translates to: VASFIKAQISHTFLF*LQPSVLHLSYQYFW
Trigger: CCAGAAGTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGTATGGCTAATTTGAGCTTTAATAAAGCTGGCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505069.1
CDS CAA 90 bp GAATTTGGTATTGTCCATTTGGTTTATTCTTATCACTGCATACTTTaGCTAACATTGTATTTGGGGCAATGCCTTGTGGCCGTCTGGGTT +
Preference number: 6 (lower is better)
Translates to: EFGIVHLVYSYHCIL*LTLYLGQCLVAVWV
Trigger: AACCCAGACGGCCACAAGGCATTGCCCCAAATACAATGTTAGCAAAAGTATGCAGTGATAAGAATAAACCAAATGGACAATACCAAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506928.5
CDS CAA 72 bp GCAGAAGATCATCTTTGTAACTGTCACACTTCTCCTTaGTGCTATCCATGGTATAAACTTATCCGTTACCTC +
Preference number: 6 (lower is better)
Translates to: AEDHLCNCHTSP*CYPWYKLIRYL
Trigger: GAGGTAACGGATAAGTTTATACCATGGATAGCACAAAGGAGAAGTGTGACAGTTACAAAGATGATCTTCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241436.8
ENST00000506928.5
CDS CAA 72 bp GCCAGCTTTATTAAAGCTCAAATTAGCCATACCTTTTaGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGC +
Preference number: 6 (lower is better)
Translates to: ASFIKAQISHTF*FLLQPSVLHLS
Trigger: GCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGTATGGCTAATTTGAGCTTTAATAAAGCTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505069.1
CDS CAA 90 bp CATATTGTAGCCAGCTTTATTAAAGCTCAAATTAGCCATACCTTTTaGTTCTTGTTACAGCCTTCTGTACTCCACTTGAGCTACCAGTAC +
Preference number: 6 (lower is better)
Translates to: HIVASFIKAQISHTF*FLLQPSVLHLSYQY
Trigger: GTACTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGTATGGCTAATTTGAGCTTTAATAAAGCTGGCTACAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505069.1
CDS TCA 72 bp CCTTTTTGTTCTTGTTACAGCCTTCTGTACTCCACTTaGGCTACCTTTAGAGGAAAGAAAGTCAAGAAATTC +
Preference number: 6 (lower is better)
Translates to: PFCSCYSLLYST*ATFRGKKVKKF
Trigger: GAATTTCTTGACTTTCTTTCCTCTAAAGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502567.1
CDS GCA 72 bp ATAACTACAGTGGCCATCAATACTCTTTTAAATACCTaGACTGGCTGTCAGTGTTGTTTTCTGCTCAATTCT +
Preference number: 6 (lower is better)
Translates to: ITTVAINTLLNT*TGCQCCFLLNS
Trigger: AGAATTGAGCAGAAAACAACACTGACAGCCAGTGCAGGTATTTAAAAGAGTATTGATGGCCACTGTAGTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508867.5
CDS GCA 72 bp CTCCTATTGCCTAATCCCTTGTACACACAAAACCACTaGACTTCGGTATTTCTAATACGAGAAAGTTTCTAT +
Preference number: 6 (lower is better)
Translates to: LLLPNPLYTQNH*TSVFLIRESFY
Trigger: ATAGAAACTTTCTCGTATTAGAAATACCGAAGTGCAGTGGTTTTGTGTGTACAAGGGATTAGGCAATAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS CCA 72 bp ATATATCCAACCTTTCCTATCTTTGAGGGGCAGGCATaGTTAACGTGGTTCTCAGTAAGATATTCATTTACA +
Preference number: 6 (lower is better)
Translates to: IYPTFPIFEGQA*LTWFSVRYSFT
Trigger: TGTAAATGAATATCTTACTGAGAACCACGTTAACCATGCCTGCCCCTCAAAGATAGGAAAGGTTGGATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS TCA 72 bp AACTCTAGAAATCTAAAAATGCGAAGTGCGTGCTTGTaGGAAGGTACTAAGGAAATTCTTCCTTTAAACGTC +
Preference number: 6 (lower is better)
Translates to: NSRNLKMRSACL*EGTKEILPLNV
Trigger: GACGTTTAAAGGAAGAATTTCCTTAGTACCTTCTCACAAGCACGCACTTCGCATTTTTAGATTTCTAGAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS CAA 72 bp TTTATTAAAGCTCAAATTAGCCATACCTTTTTGTTCTaGTTACAGCCTTCTGTACTCCACTTGAGCTACCAG +
Preference number: 6 (lower is better)
Translates to: FIKAQISHTFLF*LQPSVLHLSYQ
Trigger: CTGGTAGCTCAAGTGGAGTACAGAAGGCTGTAACAAGAACAAAAAGGTATGGCTAATTTGAGCTTTAATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505069.1
CDS CAA 72 bp GCAGAAGATCATCTTTGTAACTGTCACACTTCTCCTTaGTGCTATCCATGGTATAAACTTATCTTGAATGCA +
Preference number: 6 (lower is better)
Translates to: AEDHLCNCHTSP*CYPWYKLILNA
Trigger: TGCATTCAAGATAAGTTTATACCATGGATAGCACAAAGGAGAAGTGTGACAGTTACAAAGATGATCTTCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS TCA 72 bp AGTCAAAGTCTCATAATCAAAGTTATCCTTGACAACTaGCAAGAGTTGTTAGATCTTCTATTGGTCTTTCTG +
Preference number: 6 (lower is better)
Translates to: SQSLIIKVILDN*QELLDLLLVFL
Trigger: CAGAAAGACCAATAGAAGATCTAACAACTCTTGTCAGTTGTCAAGGATAACTTTGATTATGAGACTTTGACT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS TCA 72 bp GCTACAAAGTCAAAGTCTCATAATCAAAGTTATCCTTaGCAACTGACAAGAGTTGTTAGATCTTCTATTGGT +
Preference number: 6 (lower is better)
Translates to: ATKSKSHNQSYP*QLTRVVRSSIG
Trigger: ACCAATAGAAGATCTAACAACTCTTGTCAGTTGTCAAGGATAACTTTGATTATGAGACTTTGACTTTGTAGC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514296.5
CDS CAA 72 bp TGGTATTGCTCAAATTTCGGCTTTGTTCTAATTCCATaGCAAATCTGTCAACCTGTAATTGTGCTTTTCTTA +
Preference number: 6 (lower is better)
Translates to: WYCSNFGFVLIP*QICQPVIVLFL
Trigger: TAAGAAAAGCACAATTACAGGTTGACAGATTTGCAATGGAATTAGAACAAAGCCGAAATTTGAGCAATACCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000241436.8
ENST00000503479.6
ENST00000504026.5
ENST00000506928.5
ENST00000508526.5
ENST00000508867.5
ENST00000509126.2
ENST00000514141.5
ENST00000514296.5
ENST00000515295.5