Pregenerated sensors for POLE3 (Homo sapiens)
Ensembl gene IDs: ENSG00000148229Ensembl transcript IDs: ENST00000374169.7, ENST00000374171.5, ENST00000475080.1, ENST00000479871.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTTACAGACTGACAGAAGTGAGAAAAGGAGGCAGATGAGAAAGTaGGATGGGGAGCAGAGGAGAGGCAGGAGAGAGAAAGGAAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: SLQTDRSEKRRQMRK*DGEQRRGRREKGSR Trigger: CCTGCTTCCTTTCTCTCTCCTGCCTCTCCTCTGCTCCCCATCCCACTTTCTCATCTGCCTCCTTTTCTCACTTCTGTCAGTCTGTAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR CCA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATTGGCGGCGCGGGAGATaGCGCTCCGGGCCTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDWRRGR*RSGPPW Trigger: CCAAGGAGGCCCGGAGCGCCATCTCCCGCGCCGCCA...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR CCA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATACAGCACGAAGACGCTaGCGGCGCGGGAGATGGCGC | + |
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Preference number: 4 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDTARRR*RRGRWR Trigger: GCGCCATCTCCCGCGCCGCCAGCGTCTTCGTGCTGT...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR TCA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATCGCGTCGCTACGGTCTaGCCCTGCGAGGTTTCCGTT | + |
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Preference number: 4 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDRVATV*PCEVSV Trigger: AACGGAAACCTCGCAGGGTCAGACCGTAGCGACGCG...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374171.5 |
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| CDS-3UTR TCA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATCCTCCTTGGAGATGTTaGCACCGTCCGGGAGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDPPWRC*HRPGAP Trigger: AGGCGCTCCCGGACGGTGTCAACATCTCCAAGGAGG...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR GCA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATGCTTCAGGGAGCTACTaGGTCCGGACTTCCCGCGTC | + |
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Preference number: 4 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDASGSY*VRTSRV Trigger: GACGCGGGAAGTCCGGACGCAGTAGCTCCCTGAAGC...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR CCA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATCGCCATTGCCGCCGCTaGGGCTTAAACTCCCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDRHCRR*GLNSPS Trigger: CGAAGGGGAGTTTAAGCCCCAGCGGCGGCAATGGCG...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR CCA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATCTGAGAGCACATCACTaGCATTCAGCGTCTTCCGCT | + |
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Preference number: 4 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDLRAHH*HSASSA Trigger: AGCGGAAGACGCTGAATGCCAGTGATGTGCTCTCAG...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR CCA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATGGGGTAACGAACCGCTaGAACTCCATCTCTTCCATG | + |
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Preference number: 4 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDGVTNR*NSISSM Trigger: CATGGAAGAGATGGAGTTCCAGCGGTTCGTTACCCC...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR CCA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATAGGCAGATGAGAAAGTaGGATGGGGAGCAGAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDRQMRK*DGEQRR Trigger: TCTCCTCTGCTCCCCATCCCACTTTCTCATCTGCCT...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR TCA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATCATCTCTTCCATGGCTaGGAGCACATCACTGGCATT | + |
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Preference number: 4 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDHLFHG*EHITGI Trigger: AATGCCAGTGATGTGCTCTCAGCCATGGAAGAGATG...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR TCA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATGGATGCAATGAGCTATaGTCATGCCACTGCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDGCNEL*SCHCTP Trigger: TGGAGTGCAGTGGCATGATCATAGCTCATTGCATCC...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR CCA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATCGTGGCCAACTTATTTaGCTCAATGGAGCTTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDRGQLI*LNGASV Trigger: GACGGAAGCTCCATTGAGCCAAATAAGTTGGCCACG...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374171.5 |
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| CDS-3UTR CCA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATACTCCATCTCTTCCATaGCTGAGAGCACATCACTGG | + |
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Preference number: 4 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDTPSLP*LRAHHW Trigger: CCAGTGATGTGCTCTCAGCCATGGAAGAGATGGAGT...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR GCA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATCTGCTCCCGCCTATATaGTTCCAGAGCTTCTTTCAA | + |
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Preference number: 4 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDLLPPI*FQSFFQ Trigger: TTGAAAGAAGCTCTGGAAGCATATAGGCGGGAGCAG...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR CCA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATACTTATTTGGCTCAATaGAGCTTCCGTCCGTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDTYLAQ*SFRPFP Trigger: GGGAAACGGACGGAAGCTCCATTGAGCCAAATAAGT...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374171.5 |
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| CDS-3UTR CCA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATCAGAGCTTCTTTCAATaGGGTAACGAACCGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDQSFFQ*GNEPLE Trigger: TTCCAGCGGTTCGTTACCCCATTGAAAGAAGCTCTG...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR TCA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATCACTGGCACCATGTTTaGCTAATACCATTCCACACT | + |
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Preference number: 4 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDHWHHV*LIPFHT Trigger: AGTGTGGAATGGTATTAGTCAAACATGGTGCCAGTG...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR TCA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATATTTCAAGGATGCAATaGGCTATGATCATGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDISRMQ*AMIMPL Trigger: CAGTGGCATGATCATAGCTCATTGCATCCTTGAAAT...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR GCA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATCCGCTTTCCTTTCATTaGAAAGTTGTTAGCACAGGA | + |
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Preference number: 4 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDPLSFH*KVVSTG Trigger: TCCTGTGCTAACAACTTTGCAATGAAAGGAAAGCGG...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR GCA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATAGAGGGAGAAAGCTGTaGCTAGAGAAAATCAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDRGRKL*LEKIKF Trigger: AAACTTGATTTTCTCTAGGCACAGCTTTCTCCCTCT...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS CCA 90 bp | GTATCCCCGCGCCTCCCTTATGCCTCTGTCCCGCTCACCAGGATGTaGCGTACAGCACGAAGACGCTGGCGGCGCGGGAGATGGCGCTCC | + |
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Preference number: 5 (lower is better) Translates to: VSPRLPYASVPLTRM*RTARRRWRRGRWRS Trigger: GGAGCGCCATCTCCCGCGCCGCCAGCGTCTTCGTGCTGTACGCCACATCCTGGTGAGCGGGACAGAGGCATAAGGGAGGCGCGGGGATAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479871.1 |
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| CDS TCA 90 bp | CTTGGAGATGTTGACACCGTCCGGGAGCTGCGAGGAGACCGGGGGTaGGCAAAGCTGCCGTTCCAGCACCTGCTTCCCTCCTGCCCGTTC | + |
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Preference number: 5 (lower is better) Translates to: LGDVDTVRELRGDRG*AKLPFQHLLPSCPF Trigger: GAACGGGCAGGAGGGAAGCAGGTGCTGGAACGGCAGCTTTGCTCACCCCCGGTCTCCTCGCAGCTCCCGGACGGTGTCAACATCTCCAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000475080.1 |
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| CDS GCA 90 bp | CTCCCAGCCAGCAACTCCCAGCCAGGTATCCCCGCGCCTCCCTTATaGCTCTGTCCCGCTCACCAGGATGTGGCGTACAGCACGAAGACG | + |
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Preference number: 5 (lower is better) Translates to: LPASNSQPGIPAPPL*LCPAHQDVAYSTKT Trigger: CGTCTTCGTGCTGTACGCCACATCCTGGTGAGCGGGACAGAGGCATAAGGGAGGCGCGGGGATACCTGGCTGGGAGTTGCTGGCTGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479871.1 |
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| CDS TCA 90 bp | GCTTCAGGGAGCTACTGCGTCCGGACTTCCCGCGTCGCTACGGTCTaGCCCTGCGAGGTTTCCGTTCCGCCCCACGTGGCCAACTTATTT | + |
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Preference number: 5 (lower is better) Translates to: ASGSYCVRTSRVATV*PCEVSVPPHVANLF Trigger: AAATAAGTTGGCCACGTGGGGCGGAACGGAAACCTCGCAGGGTCAGACCGTAGCGACGCGGGAAGTCCGGACGCAGTAGCTCCCTGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374171.5 |
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| CDS CCA 90 bp | AGAAGAGAAAGGCTGTCAGACTCCCTCTTGTTTGTAAGGCGTGAGTaGGAAAAGGAGCACCCAGAGGTGGAACGGGAAAGCCTGCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: RRERLSDSLLFVRRE*EKEHPEVERESLPL Trigger: AAGAGGCAGGCTTTCCCGTTCCACCTCTGGGTGCTCCTTTTCCCACTCACGCCTTACAAACAAGAGGGAGTCTGACAGCCTTTCTCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479871.1 |
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| CDS-3UTR CAA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATCGGGCCTCTCCGCCATaGCCGCCGCTGGGGCTTAAA | + |
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Preference number: 5 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDRASPP*PPLGLK Trigger: TTTAAGCCCCAGCGGCGGCAATGGCGGAGAGGCCCG...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS CCA 90 bp | CGCCTATATGCTTCCAGAGCTTCTTTCAATGGGGTAACGAACCGCTaGAACTCCATCTCTTCCATGGCTGAGAGCACATCACTGGCATTC | + |
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Preference number: 5 (lower is better) Translates to: RLYASRASFNGVTNR*NSISSMAESTSLAF Trigger: GAATGCCAGTGATGTGCTCTCAGCCATGGAAGAGATGGAGTTCCAGCGGTTCGTTACCCCATTGAAAGAAGCTCTGGAAGCATATAGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000374169.7 ENST00000374171.5 ENST00000475080.1 ENST00000479871.1 |
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| CDS-3UTR CAA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATGCCTCCTTGGAGATGTaGACACCGTCCGGGAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDASLEM*TPSGSA Trigger: GGCGCTCCCGGACGGTGTCAACATCTCCAAGGAGGC...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR CAA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATGCGCTCCGGGCCTCCTaGGAGATGTTGACACCGTCC | + |
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Preference number: 5 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDALRAS*EMLTPS Trigger: GGACGGTGTCAACATCTCCAAGGAGGCCCGGAGCGC...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS TCA 90 bp | TTTCAATGGGGTAACGAACCGCTGGAACTCCATCTCTTCCATGGCTaGGAGCACATCACTGGCATTCAGCGTCTTCCGCTTTCCTTTCAT | + |
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Preference number: 5 (lower is better) Translates to: FQWGNEPLELHLFHG*EHITGIQRLPLSFH Trigger: ATGAAAGGAAAGCGGAAGACGCTGAATGCCAGTGATGTGCTCTCAGCCATGGAAGAGATGGAGTTCCAGCGGTTCGTTACCCCATTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000374169.7 ENST00000374171.5 ENST00000475080.1 ENST00000479871.1 |
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| CDS-3UTR CAA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATTCCGGGAGCGCCTCCTaGATGATCCTGGTGATCACG | + |
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Preference number: 5 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDSGSAS*MILVIT Trigger: CGTGATCACCAGGATCATCAAGGAGGCGCTCCCGGA...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR CAA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATCTGGTGATCACGGCATaGGGCAGGTTTAGGTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDLVITA*GRFRSS Trigger: CGAGGACCTAAACCTGCCCAATGCCGTGATCACCAG...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR CAA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATTCCTCATCCCTGCTCTaGTCTTGCTCTTCCGAGTCT | + |
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Preference number: 5 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDSSSLL*SCSSES Trigger: AGACTCGGAAGAGCAAGACAAGAGCAGGGATGAGGA...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR CAA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATACGTGGCCAACTTATTaGGCTCAATGGAGCTTCCGT | + |
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Preference number: 5 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDTWPTY*AQWSFR Trigger: ACGGAAGCTCCATTGAGCCAAATAAGTTGGCCACGT...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000374171.5 |
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| CDS-3UTR CAA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATCCTTTCATTGCAAAGTaGTTAGCACAGGATGTGGCG | + |
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Preference number: 5 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDPFIAK*LAQDVA Trigger: CGCCACATCCTGTGCTAACAACTTTGCAATGAAAGG...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR CAA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATATCCCTGCTCTTGTCTaGCTCTTCCGAGTCTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDIPALV*LFRVCF Trigger: AAAACAGACTCGGAAGAGCAAGACAAGAGCAGGGAT...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR CAA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATTCCCGCCCTTTTCAGTaGTCTACTTCTTCCTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDSRPFQ*STSSSS Trigger: TGAAGAGGAAGAAGTAGACAACTGAAAAGGGCGGGA...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS-3UTR CAA 90 bp | GAATCCCTCTTGTCAAAAGGCCATAACCTTCAGATTGATGAAGCAAAACAGGATACACTGGCACCATGTTaGACTAATACCATTCCACAC | + |
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Preference number: 5 (lower is better) Translates to: ESLLSKGHNLQIDEAKQDTLAPC*TNTIPH Trigger: GTGTGGAATGGTATTAGTCAAACATGGTGCCAGTGT...ATCCTGTTTTGCTTCATCAATCTGAAGGTTATGGCCTTTTGACAAGAGGGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374169.7 ENST00000374171.5 |
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| CDS TCA 72 bp | CGCGGGAGATGGCGCTCCGGGCCTCCTTGGAGATGTTaGCACCGTCCGGGAGCTGCGAGGAGACCGGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RGRWRSGPPWRC*HRPGAARRPGV Trigger: CACCCCCGGTCTCCTCGCAGCTCCCGGACGGTGTCAACATCTCCAAGGAGGCCCGGAGCGCCATCTCCCGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000475080.1 |
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| CDS CAA 72 bp | GCGCGGGAGATGGCGCTCCGGGCCTCCTTGGAGATGTaGACACCGTCCGGGAGCTGCGAGGAGACCGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: AREMALRASLEM*TPSGSCEETGG Trigger: ACCCCCGGTCTCCTCGCAGCTCCCGGACGGTGTCAACATCTCCAAGGAGGCCCGGAGCGCCATCTCCCGCGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000475080.1 |
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| CDS CAA 90 bp | AGCACGAAGACGCTGGCGGCGCGGGAGATGGCGCTCCGGGCCTCCTaGGAGATGTTGACACCGTCCGGGAGCTGCGAGGAGACCGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: STKTLAAREMALRAS*EMLTPSGSCEETGG Trigger: ACCCCCGGTCTCCTCGCAGCTCCCGGACGGTGTCAACATCTCCAAGGAGGCCCGGAGCGCCATCTCCCGCGCCGCCAGCGTCTTCGTGCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000475080.1 |
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| CDS TCA 72 bp | AGCTACTGCGTCCGGACTTCCCGCGTCGCTACGGTCTaGCCCTGCGAGGTTTCCGTTCCGCCCCACGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SYCVRTSRVATV*PCEVSVPPHVA Trigger: GGCCACGTGGGGCGGAACGGAAACCTCGCAGGGTCAGACCGTAGCGACGCGGGAAGTCCGGACGCAGTAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374171.5 |
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| CDS CAA 90 bp | AGCACGAAGACGCTGGCGGCGCGGGAGATGGCGCTCCGGGCCTCCTaGGAGATGTTGACACCGTCCGGGAGCGCCTCCTTGATGATCCTG | + |
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Preference number: 6 (lower is better) Translates to: STKTLAAREMALRAS*EMLTPSGSASLMIL Trigger: CAGGATCATCAAGGAGGCGCTCCCGGACGGTGTCAACATCTCCAAGGAGGCCCGGAGCGCCATCTCCCGCGCCGCCAGCGTCTTCGTGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374169.7 ENST00000374171.5 ENST00000479871.1 |
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| CDS TCA 72 bp | GTTGACACCGTCCGGGAGCTGCGAGGAGACCGGGGGTaGGCAAAGCTGCCGTTCCAGCACCTGCTTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: VDTVRELRGDRG*AKLPFQHLLPS Trigger: GGAGGGAAGCAGGTGCTGGAACGGCAGCTTTGCTCACCCCCGGTCTCCTCGCAGCTCCCGGACGGTGTCAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000475080.1 |
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| CDS CCA 72 bp | CGCCTCCCTTATGCCTCTGTCCCGCTCACCAGGATGTaGCGTACAGCACGAAGACGCTGGCGGCGCGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: RLPYASVPLTRM*RTARRRWRRGR Trigger: TCTCCCGCGCCGCCAGCGTCTTCGTGCTGTACGCCACATCCTGGTGAGCGGGACAGAGGCATAAGGGAGGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479871.1 |
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| CDS CAA 72 bp | GCGCGGGAGATGGCGCTCCGGGCCTCCTTGGAGATGTaGACACCGTCCGGGAGCGCCTCCTTGATGATCCTG | + |
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Preference number: 6 (lower is better) Translates to: AREMALRASLEM*TPSGSASLMIL Trigger: CAGGATCATCAAGGAGGCGCTCCCGGACGGTGTCAACATCTCCAAGGAGGCCCGGAGCGCCATCTCCCGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374169.7 ENST00000374171.5 ENST00000479871.1 |
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| CDS CAA 72 bp | CATTGGGCAGGTTTAGGTCCTCGGGCCTCTCCGCCATaGCCGCCGCTGGGGCTTAAACTCCCCTTCGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: HWAGLGPRASPP*PPLGLKLPFAS Trigger: GGAGGCGAAGGGGAGTTTAAGCCCCAGCGGCGGCAATGGCGGAGAGGCCCGAGGACCTAAACCTGCCCAATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000374169.7 ENST00000374171.5 ENST00000475080.1 ENST00000479871.1 |
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| CDS CAA 90 bp | ACACCGTCCGGGAGCGCCTCCTTGATGATCCTGGTGATCACGGCATaGGGCAGGTTTAGGTCCTCGGGCCTCTCCGCCATTGCCGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: TPSGSASLMILVITA*GRFRSSGLSAIAAA Trigger: AGCGGCGGCAATGGCGGAGAGGCCCGAGGACCTAAACCTGCCCAATGCCGTGATCACCAGGATCATCAAGGAGGCGCTCCCGGACGGTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374169.7 ENST00000374171.5 ENST00000479871.1 |
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| CDS CAA 90 bp | CCCGAGCTGCTCACCGCCTCCTTGATGATCCTGGTGATCACGGCATaGGGCAGGTTTAGGTCCTCGGGCCTCTCCGCCATTGCCGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: PELLTASLMILVITA*GRFRSSGLSAIAAA Trigger: AGCGGCGGCAATGGCGGAGAGGCCCGAGGACCTAAACCTGCCCAATGCCGTGATCACCAGGATCATCAAGGAGGCGGTGAGCAGCTCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475080.1 |
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| CDS GCA 72 bp | AGCAACTCCCAGCCAGGTATCCCCGCGCCTCCCTTATaGCTCTGTCCCGCTCACCAGGATGTGGCGTACAGC | + |
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Preference number: 6 (lower is better) Translates to: SNSQPGIPAPPL*LCPAHQDVAYS Trigger: GCTGTACGCCACATCCTGGTGAGCGGGACAGAGGCATAAGGGAGGCGCGGGGATACCTGGCTGGGAGTTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479871.1 |
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| CDS CCA 72 bp | CCGTTCCGCCCCACGTGGCCAACTTATTTGGCTCAATaGAGCTTCCGTCCGTTTCCCATGGTGCCCTGCGCC | + |
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Preference number: 6 (lower is better) Translates to: PFRPTWPTYLAQ*SFRPFPMVPCA Trigger: GGCGCAGGGCACCATGGGAAACGGACGGAAGCTCCATTGAGCCAAATAAGTTGGCCACGTGGGGCGGAACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000374171.5 |
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| CDS TCA 72 bp | GGTAACGAACCGCTGGAACTCCATCTCTTCCATGGCTaGGAGCACATCACTGGCATTCAGCGTCTTCCGCTT | + |
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Preference number: 6 (lower is better) Translates to: GNEPLELHLFHG*EHITGIQRLPL Trigger: AAGCGGAAGACGCTGAATGCCAGTGATGTGCTCTCAGCCATGGAAGAGATGGAGTTCCAGCGGTTCGTTACC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000374169.7 ENST00000374171.5 ENST00000475080.1 ENST00000479871.1 |
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| CDS CCA 72 bp | GCTTCCAGAGCTTCTTTCAATGGGGTAACGAACCGCTaGAACTCCATCTCTTCCATGGCTGAGAGCACATCA | + |
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Preference number: 6 (lower is better) Translates to: ASRASFNGVTNR*NSISSMAESTS Trigger: TGATGTGCTCTCAGCCATGGAAGAGATGGAGTTCCAGCGGTTCGTTACCCCATTGAAAGAAGCTCTGGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000374169.7 ENST00000374171.5 ENST00000475080.1 ENST00000479871.1 |
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| CDS CCA 72 bp | GGAACTCCATCTCTTCCATGGCTGAGAGCACATCACTaGCATTCAGCGTCTTCCGCTTTCCTTTCATTGCAA | + |
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Preference number: 6 (lower is better) Translates to: GTPSLPWLRAHH*HSASSAFLSLQ Trigger: TTGCAATGAAAGGAAAGCGGAAGACGCTGAATGCCAGTGATGTGCTCTCAGCCATGGAAGAGATGGAGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000374169.7 ENST00000374171.5 ENST00000475080.1 ENST00000479871.1 |
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| CDS CCA 72 bp | GGAACGGGAAAGCCTGCCTCTTACATGTATGGATTTTaGTGTGACAGGGATAAGTCCTTCCCTTCTCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: GTGKPASYMYGF*CDRDKSFPSLH Trigger: GTGCAGAGAAGGGAAGGACTTATCCCTGTCACACCAAAATCCATACATGTAAGAGGCAGGCTTTCCCGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479871.1 |
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| CDS TCA 72 bp | TTTGCTTCAGAACTTGTAAAAACTGGCAGAGGACTGTaGACATGTCCCCACCGAGGGAGAACACAATCGTTG | + |
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Preference number: 6 (lower is better) Translates to: FASELVKTGRGL*TCPHRGRTQSL Trigger: CAACGATTGTGTTCTCCCTCGGTGGGGACATGTTCACAGTCCTCTGCCAGTTTTTACAAGTTCTGAAGCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479871.1 |
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| CDS GCA 72 bp | ATCACTGGCATTCAGCGTCTTCCGCTTTCCTTTCATTaGAAAGTTGTTAGCACTGAGAGAAGAGAAAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ITGIQRLPLSFH*KVVSTERRERL Trigger: CAGCCTTTCTCTTCTCTCAGTGCTAACAACTTTGCAATGAAAGGAAAGCGGAAGACGCTGAATGCCAGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479871.1 |
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| CDS CAA 90 bp | TCTTCATTCTGTTCTTCTTCTTCCAGCCTTTCTTCGTCTTCATCATaGTCCTCATCCCTGCTCTTGTCTTGCTCTTCCGAGTCTGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: SSFCSSSSSLSSSSS*SSSLLLSCSSESVF Trigger: AAAAACAGACTCGGAAGAGCAAGACAAGAGCAGGGATGAGGACAATGATGAAGACGAAGAAAGGCTGGAAGAAGAAGAACAGAATGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000374169.7 ENST00000374171.5 ENST00000479871.1 |
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