RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POLE (Homo sapiens)

Ensembl gene IDs: ENSG00000177084

Ensembl transcript IDs: ENST00000320574.10, ENST00000416953.2, ENST00000434528.4, ENST00000441786.3, ENST00000503265.4, ENST00000534922.5, ENST00000535270.5, ENST00000535934.2, ENST00000536445.5, ENST00000537064.5, ENST00000538196.1, ENST00000539357.1, ENST00000539618.1, ENST00000540987.1, ENST00000541213.5, ENST00000541627.2, ENST00000544692.5, ENST00000544870.5, ENST00000672002.1, ENST00000672742.1

Found 2244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGTGGCAGGACCATCCCGGATGGCCCCGGGCCTGAGCACACCCTCTaGCGACTCCAGACGCTGCCTCTTCCTGCGGGCGAGGCGCTGCCG +
Preference number: 1 (lower is better)
Translates to: RGRTIPDGPGPEHTL*RLQTLPLPAGEALP
Trigger: CGGCAGCGCCTCGCCCGCAGGAAGAGGCAGCGTCTGGAGTCGGCAGAGGGTGTGCTCAGGCCCGGGGCCATCCGGGATGGTCCTGCCACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 90 bp CCCTCTGCCGACTCCAGACGCTGCCTCTTCCTGCGGGCGAGGCGCTaGCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAG +
Preference number: 1 (lower is better)
Translates to: PSADSRRCLFLRARR*RACSCHFFLWNRSQ
Trigger: CTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCTCGCCCGCAGGAAGAGGCAGCGTCTGGAGTCGGCAGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp AGGGTGGTCAGTGGTCTGGTCACTGGAAGCACGGGGATGTGGCCTTaGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGGGCCCG +
Preference number: 1 (lower is better)
Translates to: RVVSGLVTGSTGMWP*HQEAWHGRRGTRGP
Trigger: CGGGCCCCGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTGCTTCCAGTGACCAGACCACTGACCACCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp CAGGGCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTaGCGAGGCCAGGGCCACATCCTGCTCCCGCTCCCTCCTGTGACG +
Preference number: 1 (lower is better)
Translates to: QGTRSLAHGLLLQVL*RGQGHILLPLPPVT
Trigger: CGTCACAGGAGGGAGCGGGAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGCCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 90 bp TCCTCCTGGCTGGTTCCCAGGGCGGGAGGCTGCCCCAAGATTTCCTaGCAGGGCACAGTCGGCGTGAGGTCCTGGGACTCCTCCTGGCTC +
Preference number: 1 (lower is better)
Translates to: SSWLVPRAGGCPKIS*QGTVGVRSWDSSWL
Trigger: GAGCCAGGAGGAGTCCCAGGACCTCACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCAGCCTCCCGCCCTGGGAACCAGCCAGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp GACGCAGAGGCACCCGGGGCCCGGGGCTGGCTAATGGCCCAGCTGTaGGTTCTTCTGCAGCAGCCACTCCAGGGTCTCCAGGAGGTACGA +
Preference number: 1 (lower is better)
Translates to: DAEAPGARGWLMAQL*VLLQQPLQGLQEVR
Trigger: TCGTACCTCCTGGAGACCCTGGAGTGGCTGCTGCAGAAGAACCCACAGCTGGGCCATTAGCCAGCCCCGGGCCCCGGGTGCCTCTGCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp CTGCGGGCGAGGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTaGAACCGGAGCCAGACAAGCCATTCCTCCTGGCTGGTTCCCAGG +
Preference number: 1 (lower is better)
Translates to: LRARRCRACSCHFFL*NRSQTSHSSWLVPR
Trigger: CCTGGGAACCAGCCAGGAGGAATGGCTTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCTCGCCCGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp CCCAGGTCAGGGCGGGCTGTAGGGGACAGCCAGAGCAGGTGGTTGTaGCGCTGGAGGTGGCGGGCAAAGAAGAGGTCGGAGCCGAATGTG +
Preference number: 1 (lower is better)
Translates to: PRSGRAVGDSQSRWL*RWRWRAKKRSEPNV
Trigger: CACATTCGGCTCCGACCTCTTCTTTGCCCGCCACCTCCAGCGCCACAACCACCTGCTCTGGCTGTCCCCTACAGCCCGCCCTGACCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp TTTCCACCCAGGTCAGGGCGGGCTGTAGGGGACAGCCAGAGCAGGTaGTTGTGGCGCTGGAGGTGGCGGGCAAAGAAGAGGTCGGAGCCG +
Preference number: 1 (lower is better)
Translates to: FPPRSGRAVGDSQSR*LWRWRWRAKKRSEP
Trigger: CGGCTCCGACCTCTTCTTTGCCCGCCACCTCCAGCGCCACAACCACCTGCTCTGGCTGTCCCCTACAGCCCGCCCTGACCTGGGTGGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 90 bp AGCCAGACAAGCCATTCCTCCTGGCTGGTTCCCAGGGCGGGAGGCTaGCCCAAGATTTCCTGCCAGGGCACAGTCGGCGTGAGGTCCTGG +
Preference number: 1 (lower is better)
Translates to: SQTSHSSWLVPRAGG*PKISCQGTVGVRSW
Trigger: CCAGGACCTCACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCAGCCTCCCGCCCTGGGAACCAGCCAGGAGGAATGGCTTGTCTGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 90 bp AGACGCTGCCTCTTCCTGCGGGCGAGGCGCTGCCGGGCCTGCAGCTaGCACTTCTTCTTGTGGAACCGGAGCCAGACAAGCCATTCCTCC +
Preference number: 1 (lower is better)
Translates to: RRCLFLRARRCRACS*HFFLWNRSQTSHSS
Trigger: GGAGGAATGGCTTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCTCGCCCGCAGGAAGAGGCAGCGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 90 bp GACTCCAGACGCTGCCTCTTCCTGCGGGCGAGGCGCTGCCGGGCCTaGAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACAAGCCAT +
Preference number: 1 (lower is better)
Translates to: DSRRCLFLRARRCRA*SCHFFLWNRSQTSH
Trigger: ATGGCTTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCTCGCCCGCAGGAAGAGGCAGCGTCTGGAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp TCAGGGCGGGCTGTAGGGGACAGCCAGAGCAGGTGGTTGTGGCGCTaGAGGTGGCGGGCAAAGAAGAGGTCGGAGCCGAATGTGGAGATG +
Preference number: 1 (lower is better)
Translates to: SGRAVGDSQSRWLWR*RWRAKKRSEPNVEM
Trigger: CATCTCCACATTCGGCTCCGACCTCTTCTTTGCCCGCCACCTCCAGCGCCACAACCACCTGCTCTGGCTGTCCCCTACAGCCCGCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR TCA 90 bp GTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTaGGAAACGGCGCCCAGGGCACTCGCAGCCTCGCTCACGGCCTGC +
Preference number: 1 (lower is better)
Translates to: VWCRKQQRPGKAFTA*ETAPRALAASLTAC
Trigger: GCAGGCCGTGAGCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 90 bp CCAGGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTaGGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCTCACGGC +
Preference number: 1 (lower is better)
Translates to: PGVVQEATEAWKSIH*VRNGAQGTRSLAHG
Trigger: GCCGTGAGCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 90 bp GGAGCCCTCGGGCTTGCGGGAGATGATGTAGCGGCAACTCAGCCCTaGATCCTTGACCATCTGGTCTCCCAGGAACTCGGCCAGGCGCTT +
Preference number: 1 (lower is better)
Translates to: GALGLAGDDVAATQP*ILDHLVSQELGQAL
Trigger: AAGCGCCTGGCCGAGTTCCTGGGAGACCAGATGGTCAAGGATGCAGGGCTGAGTTGCCGCTACATCATCTCCCGCAAGCCCGAGGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 90 bp GACGCTCCCACCCCACCAGGTGTGGTGCAGGAAGCAACAGAGGCCTaGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGC +
Preference number: 1 (lower is better)
Translates to: DAPTPPGVVQEATEA*KSIHCVRNGAQGTR
Trigger: GCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACCTGGTGGGGTGGGAGCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp CCAGCGTCATCTCGATGGCAGAGGAGTCGTAGGGCGCCTGACAGTTaGAGCAGAGCCACTGAGGCAGGACCGCCCCATCCTCTGAGAAGG +
Preference number: 1 (lower is better)
Translates to: PASSRWQRSRRAPDS*SRATEAGPPHPLRR
Trigger: CCTTCTCAGAGGATGGGGCGGTCCTGCCTCAGTGGCTCTGCTCCAACTGTCAGGCGCCCTACGACTCCTCTGCCATCGAGATGACGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR TCA 90 bp AGTACCTGCTCATCTCGAAGGCCTGCGACAGGCAGGTGTCCAGGTTaGGGTAGTGACGGATCATGCGCCGGGCTCCATGGCGCTGCCAGT +
Preference number: 1 (lower is better)
Translates to: STCSSRRPATGRCPG*GSDGSCAGLHGAAS
Trigger: ACTGGCAGCGCCATGGAGCCCGGCGCATGATCCGTCACTACCTCAACCTGGACACCTGCCTGTCGCAGGCCTTCGAGATGAGCAGGTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 90 bp ATAACCGCTCCCCGTCCCTGGGCTGATGTGGGGACAGAGGCAGAATaGGAAGTGCTCGGCCCACCTCCTGGTACACAGCAAGCATTGCCC +
Preference number: 1 (lower is better)
Translates to: ITAPRPWADVGTEAE*EVLGPPPGTQQALP
Trigger: GGGCAATGCTTGCTGTGTACCAGGAGGTGGGCCGAGCACTTCGCATTCTGCCTCTGTCCCCACATCAGCCCAGGGACGGGGAGCGGTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR TCA 90 bp CTTTACACAGGTCCAGGTCGCGGCAGAAGTTACAGCTGCGGCAGATaGCCTCAGGAAGCACGTAGGAGCGGCAGGGGTCTCGGAACTGGG +
Preference number: 1 (lower is better)
Translates to: LYTGPGRGRSYSCGR*PQEARRSGRGLGTG
Trigger: CCCAGTTCCGAGACCCCTGCCGCTCCTACGTGCTTCCTGAGGTCATCTGCCGCAGCTGTAACTTCTGCCGCGACCTGGACCTGTGTAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR TCA 90 bp GTTGCTGCGCACAGTGTCCAGCACAAAGACGGATGCCCTGCGCTGTaGGGGGATGAAGATCCCGAAGAGCGCTTTGTGGGCCTGTGCGTG +
Preference number: 1 (lower is better)
Translates to: VAAHSVQHKDGCPAL*GDEDPEERFVGLCV
Trigger: CACGCACAGGCCCACAAAGCGCTCTTCGGGATCTTCATCCCCTCACAGCGCAGGGCATCCGTCTTTGTGCTGGACACTGTGCGCAGCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp ATGTGGATGCACTGGGGCGCCTTGTACTCCCCCTGGCTGTCCTTCTaGAAGCCTATCTCCTGCTGCATGCTCAGACCGTGGACTGCTGCC +
Preference number: 1 (lower is better)
Translates to: MWMHWGALYSPWLSF*KPISCCMLRPWTAA
Trigger: GGCAGCAGTCCACGGTCTGAGCATGCAGCAGGAGATAGGCTTCCAGAAGGACAGCCAGGGGGAGTACAAGGCGCCCCAGTGCATCCACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 90 bp GGCTGCCCCAAGATTTCCTGCCAGGGCACAGTCGGCGTGAGGTCCTaGGACTCCTCCTGGCTCTCCCAAAGAACTCGCTTCCTCTTCACA +
Preference number: 1 (lower is better)
Translates to: GCPKISCQGTVGVRS*DSSWLSQRTRFLFT
Trigger: TGTGAAGAGGAAGCGAGTTCTTTGGGAGAGCCAGGAGGAGTCCCAGGACCTCACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp TGGGCCCCCGGCGCTCCTCCTTGTAGGCGAGCAGGAATCGCTGGATaGCTCTGCAGATGGTCTTCAGGTCAGTTTCTGCCCGAACTTCGA +
Preference number: 1 (lower is better)
Translates to: WAPGAPPCRRAGIAG*LCRWSSGQFLPELR
Trigger: TCGAAGTTCGGGCAGAAACTGACCTGAAGACCATCTGCAGAGCCATCCAGCGATTCCTGCTCGCCTACAAGGAGGAGCGCCGGGGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR TCA 90 bp GGGACTCCTCCTGGCTCTCCCAAAGAACTCGCTTCCTCTTCACAGTaGCAGGGGCTGCTGGGTGAGGCAGCTTTACGAGGCCGAAGTCCT +
Preference number: 1 (lower is better)
Translates to: GTPPGSPKELASSSQ*QGLLGEAALRGRSP
Trigger: AGGACTTCGGCCTCGTAAAGCTGCCTCACCCAGCAGCCCCTGTCACTGTGAAGAGGAAGCGAGTTCTTTGGGAGAGCCAGGAGGAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR TCA 90 bp GCACAGTGTCCAGCACAAAGACGGATGCCCTGCGCTGTGAGGGGATaGAGATCCCGAAGAGCGCTTTGTGGGCCTGTGCGTGGTGGTACA +
Preference number: 1 (lower is better)
Translates to: AQCPAQRRMPCAVRG*RSRRALCGPVRGGT
Trigger: TGTACCACCACGCACAGGCCCACAAAGCGCTCTTCGGGATCTTCATCCCCTCACAGCGCAGGGCATCCGTCTTTGTGCTGGACACTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp GTTGTGGAGTGTGCGGTGCAGGGCAGGGTCATGAAGCAGAGAGGATaGCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGC +
Preference number: 1 (lower is better)
Translates to: VVECAVQGRVMKQRG*RPKPAVEVHHLVVC
Trigger: GCAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGCCATCCTCTCTGCTTCATGACCCTGCCCTGCACCGCACACTCCACAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp CTGGCTGGCATGAACTCGCCCCTCCACTGCCAGGCCATCTTCCGCTaGCAGTTTGCTCCAGGCTTATTGAAGTCACAGGCAGCACAGGTG +
Preference number: 1 (lower is better)
Translates to: LAGMNSPLHCQAIFR*QFAPGLLKSQAAQV
Trigger: CACCTGTGCTGCCTGTGACTTCAATAAGCCTGGAGCAAACTGCCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGTTCATGCCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 90 bp TCCAGCTCTAAGGGCCTCCCAATCTGCTCGATCAGCTCCCGTGCCTaGGTGATGATGTTGGCCCCTGTGAAGCAGACGATGCCAGCCATC +
Preference number: 1 (lower is better)
Translates to: SSSKGLPICSISSRA*VMMLAPVKQTMPAI
Trigger: GATGGCTGGCATCGTCTGCTTCACAGGGGCCAACATCATCACCCAGGCACGGGAGCTGATCGAGCAGATTGGGAGGCCCTTAGAGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 90 bp ATTTCCTGCCAGGGCACAGTCGGCGTGAGGTCCTGGGACTCCTCCTaGCTCTCCCAAAGAACTCGCTTCCTCTTCACAGTGACAGGGGCT +
Preference number: 1 (lower is better)
Translates to: ISCQGTVGVRSWDSS*LSQRTRFLFTVTGA
Trigger: AGCCCCTGTCACTGTGAAGAGGAAGCGAGTTCTTTGGGAGAGCCAGGAGGAGTCCCAGGACCTCACGCCGACTGTGCCCTGGCAGGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp AGATGGTCTTCAGGTCAGTTTCTGCCCGAACTTCGAAGGTGTGTTTaGGGGGTGGCAGGAGCTCAGGGCCCACCTTCTCCAGGAGGAGGC +
Preference number: 1 (lower is better)
Translates to: RWSSGQFLPELRRCV*GVAGAQGPPSPGGG
Trigger: GCCTCCTCCTGGAGAAGGTGGGCCCTGAGCTCCTGCCACCCCCCAAACACACCTTCGAAGTTCGGGCAGAAACTGACCTGAAGACCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 90 bp TCCTGCTCTTGCTTGTTGGGGAAGATGATGTTGGCGTGGAAGGCCTaGACCATCAGCAAGGCCTCACACAGAGTGCCAGAGCCCTTCCGC +
Preference number: 1 (lower is better)
Translates to: SCSCLLGKMMLAWKA*TISKASHRVPEPFR
Trigger: GCGGAAGGGCTCTGGCACTCTGTGTGAGGCCTTGCTGATGGTGCAGGCCTTCCACGCCAACATCATCTTCCCCAACAAGCAAGAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR GCA 90 bp CATGAACTCGCCCCTCCACTGCCAGGCCATCTTCCGCTGGCAGTTTaGTCCAGGCTTATTGAAGTCACAGGCAGCACAGGTGGCTTCGTC +
Preference number: 1 (lower is better)
Translates to: HELAPPLPGHLPLAV*SRLIEVTGSTGGFV
Trigger: GACGAAGCCACCTGTGCTGCCTGTGACTTCAATAAGCCTGGAGCAAACTGCCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGTTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR GCA 90 bp CTGGCTCTCCCAAAGAACTCGCTTCCTCTTCACAGTGACAGGGGCTaGTGGGTGAGGCAGCTTTACGAGGCCGAAGTCCTCCATGTCAGG +
Preference number: 1 (lower is better)
Translates to: LALPKNSLPLHSDRG*WVRQLYEAEVLHVR
Trigger: CCTGACATGGAGGACTTCGGCCTCGTAAAGCTGCCTCACCCAGCAGCCCCTGTCACTGTGAAGAGGAAGCGAGTTCTTTGGGAGAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 90 bp CCCGGCGCTCCTCCTTGTAGGCGAGCAGGAATCGCTGGATGGCTCTaGAGATGGTCTTCAGGTCAGTTTCTGCCCGAACTTCGAAGGTGT +
Preference number: 1 (lower is better)
Translates to: PGAPPCRRAGIAGWL*RWSSGQFLPELRRC
Trigger: ACACCTTCGAAGTTCGGGCAGAAACTGACCTGAAGACCATCTGCAGAGCCATCCAGCGATTCCTGCTCGCCTACAAGGAGGAGCGCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp CATTTCTCCATGCAAACAGGTGAGACTCCAGCCCCACCAGGGCCTTaGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGAAG +
Preference number: 1 (lower is better)
Translates to: HFSMQTGETPAPPGP*EPVSSQSPISGSQK
Trigger: CTTCTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGGCTGGAGTCTCACCTGTTTGCATGGAGAAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp TGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGAGGCTGTaGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCAGCCC +
Preference number: 1 (lower is better)
Translates to: WIPGETSPQTAPVRL*GQPISPCKQVRLQP
Trigger: GGGCTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp CCTCCTGGTACACAGCAAGCATTGCCCAGCATGAACCACCGCTGGTaGGTAATGCGAGTAGCTGCCCTCAACCATGCTCTCCGCAGACTG +
Preference number: 1 (lower is better)
Translates to: PPGTQQALPSMNHRW*VMRVAALNHALRRL
Trigger: CAGTCTGCGGAGAGCATGGTTGAGGGCAGCTACTCGCATTACCCACCAGCGGTGGTTCATGCTGGGCAATGCTTGCTGTGTACCAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR CCA 90 bp CCACCTCCTGGTACACAGCAAGCATTGCCCAGCATGAACCACCGCTaGTGGGTAATGCGAGTAGCTGCCCTCAACCATGCTCTCCGCAGA +
Preference number: 1 (lower is better)
Translates to: PPPGTQQALPSMNHR*WVMRVAALNHALRR
Trigger: TCTGCGGAGAGCATGGTTGAGGGCAGCTACTCGCATTACCCACCAGCGGTGGTTCATGCTGGGCAATGCTTGCTGTGTACCAGGAGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR CCA 90 bp GATGATGTTGGGGTACATGGCCCCCACGTCCAGGTGGTAGATGAGTaGACACTCGATGCGGCTGGGAACGTCCTTCAGGGAGGCAAGCTT +
Preference number: 1 (lower is better)
Translates to: DDVGVHGPHVQVVDE*TLDAAGNVLQGGKL
Trigger: AAGCTTGCCTCCCTGAAGGACGTTCCCAGCCGCATCGAGTGTCCACTCATCTACCACCTGGACGTGGGGGCCATGTACCCCAACATCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 90 bp GCTCTCCCAAAGAACTCGCTTCCTCTTCACAGTGACAGGGGCTGCTaGGTGAGGCAGCTTTACGAGGCCGAAGTCCTCCATGTCAGGAGC +
Preference number: 1 (lower is better)
Translates to: ALPKNSLPLHSDRGC*VRQLYEAEVLHVRS
Trigger: GCTCCTGACATGGAGGACTTCGGCCTCGTAAAGCTGCCTCACCCAGCAGCCCCTGTCACTGTGAAGAGGAAGCGAGTTCTTTGGGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR TCA 90 bp GCTCCTGACCCTCAACCACGCCCTCTGCAGCAGACCGACGGCTCCTaGCACCTAAGTGCTGATGCCTCACACATCATACTCAGTAGAGCT +
Preference number: 1 (lower is better)
Translates to: APDPQPRPLQQTDGS*HLSADASHIILSRA
Trigger: AGCTCTACTGAGTATGATGTGTGAGGCATCAGCACTTAGGTGTCAGGAGCCGTCGGTCTGCTGCAGAGGGCGTGGTTGAGGGTCAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR TCA 90 bp CTAGCTCCACGGGATCATAGCCTAGCTTGGCCTTGGCGGCCGCCTTaGGATTATGACTGCCCACAGGAAGGTAACTGTCCCTCTTCACCC +
Preference number: 1 (lower is better)
Translates to: LAPRDHSLAWPWRPP*DYDCPQEGNCPSSP
Trigger: GGGTGAAGAGGGACAGTTACCTTCCTGTGGGCAGTCATAATCTCAAGGCGGCCGCCAAGGCCAAGCTAGGCTATGATCCCGTGGAGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 90 bp TTGGTGACTTGCTCCACAGGCACTTTCTCCTCTTCCTCAAGGGCGTaGCGCAAGGTCTTCTCAACCCGCTGCAGCAGGAAGTCAAAGGCG +
Preference number: 1 (lower is better)
Translates to: LVTCSTGTFSSSSRA*RKVFSTRCSRKSKA
Trigger: CGCCTTTGACTTCCTGCTGCAGCGGGTTGAGAAGACCTTGCGCCACGCCCTTGAGGAAGAGGAGAAAGTGCCTGTGGAGCAAGTCACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR TCA 90 bp TCCCAAAGAACTCGCTTCCTCTTCACAGTGACAGGGGCTGCTGGGTaGGGCAGCTTTACGAGGCCGAAGTCCTCCATGTCAGGAGCACTT +
Preference number: 1 (lower is better)
Translates to: SQRTRFLFTVTGAAG*GSFTRPKSSMSGAL
Trigger: AAGTGCTCCTGACATGGAGGACTTCGGCCTCGTAAAGCTGCCTCACCCAGCAGCCCCTGTCACTGTGAAGAGGAAGCGAGTTCTTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 90 bp GGATGGCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTaGATAGATGTTGTGGTACTGGGTGATCTCCTTCACCCAGCCCAC +
Preference number: 1 (lower is better)
Translates to: GWRPKPAVEVHHLVV*IDVVVLGDLLHPAH
Trigger: GTGGGCTGGGTGAAGGAGATCACCCAGTACCACAACATCTATGCAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGCCATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 90 bp TGCATCCTTGACCATCTGGTCTCCCAGGAACTCGGCCAGGCGCTTTaGTGTGCTGATGGACGTAGACTTCTGCTCCCCGTAATCTTCCAG +
Preference number: 1 (lower is better)
Translates to: CILDHLVSQELGQAL*CADGRRLLLPVIFQ
Trigger: CTGGAAGATTACGGGGAGCAGAAGTCTACGTCCATCAGCACAGCAAAGCGCCTGGCCGAGTTCCTGGGAGACCAGATGGTCAAGGATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 90 bp AGGCCATCAGCTTCTTCTGTAGAACTTCCACCAGCGTCATCTCGATaGCAGAGGAGTCGTAGGGCGCCTGACAGTTGGAGCAGAGCCACT +
Preference number: 1 (lower is better)
Translates to: RPSASSVELPPASSR*QRSRRAPDSWSRAT
Trigger: AGTGGCTCTGCTCCAACTGTCAGGCGCCCTACGACTCCTCTGCCATCGAGATGACGCTGGTGGAAGTTCTACAGAAGAAGCTGATGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp TGTGGCGCTGGAGGTGGCGGGCAAAGAAGAGGTCGGAGCCGAATGTaGAGATGTCCTCTGGTAGGTTCCCAATGGGAATGTGAAAGTACC +
Preference number: 1 (lower is better)
Translates to: CGAGGGGQRRGRSRM*RCPLVGSQWECEST
Trigger: GGTACTTTCACATTCCCATTGGGAACCTACCAGAGGACATCTCCACATTCGGCTCCGACCTCTTCTTTGCCCGCCACCTCCAGCGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR TCA 90 bp TGCTTCCAGCTGGTCCTGTGTGGAGGTGAAGGACAAGGGCTGCAGTaGGCCAAAAGTGAGGTGCACAGAGGTCTTGTTTTCCTGAGGCTG +
Preference number: 1 (lower is better)
Translates to: CFQLVLCGGEGQGLQ*AKSEVHRGLVFLRL
Trigger: CAGCCTCAGGAAAACAAGACCTCTGTGCACCTCACTTTTGGCTCACTGCAGCCCTTGTCCTTCACCTCCACACAGGACCAGCTGGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR TCA 90 bp TGGGTGGACGTACTTCATGTACAGGTAGTAAGTGGCGACAGCATCTaGCACAGAATACGTGGCCAGAGTCTGGGGCTGCTCCGTGGCCAT +
Preference number: 1 (lower is better)
Translates to: WVDVLHVQVVSGDSI*HRIRGQSLGLLRGH
Trigger: ATGGCCACGGAGCAGCCCCAGACTCTGGCCACGTATTCTGTGTCAGATGCTGTCGCCACTTACTACCTGTACATGAAGTACGTCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR GCA 90 bp GGTTCTTCTGCAGCAGCCACTCCAGGGTCTCCAGGAGGTACGACATaGCGTAGTGCTGGGCAATGTTCCGGAATATTCCGATCTGTTCCA +
Preference number: 1 (lower is better)
Translates to: GSSAAATPGSPGGTT*RSAGQCSGIFRSVP
Trigger: TGGAACAGATCGGAATATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGGAGTGGCTGCTGCAGAAGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 90 bp TCCAGCACGTGTCCGTCGTCCGTCAGCTTATTGAACTCCTGCTCTTaGTTGTTGGGGAAGATGATGTTGGCGTGGAAGGCCTGCACCATC +
Preference number: 1 (lower is better)
Translates to: SSTCPSSVSLLNSCS*LLGKMMLAWKACTI
Trigger: GATGGTGCAGGCCTTCCACGCCAACATCATCTTCCCCAACAAGCAAGAGCAGGAGTTCAATAAGCTGACGGACGACGGACACGTGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR GCA 90 bp TCAGAGTCCAGCACGTGTCCGTCGTCCGTCAGCTTATTGAACTCCTaGTCTTGCTTGTTGGGGAAGATGATGTTGGCGTGGAAGGCCTGC +
Preference number: 1 (lower is better)
Translates to: SESSTCPSSVSLLNS*SCLLGKMMLAWKAC
Trigger: GCAGGCCTTCCACGCCAACATCATCTTCCCCAACAAGCAAGAGCAGGAGTTCAATAAGCTGACGGACGACGGACACGTGCTGGACTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR GCA 90 bp TCCAGGTGCTCAAGAGCAAAGGTCTCTGCTTCCCAGCCTGAAAGGTaGCTCACCAGCTGTTTATTGACCACACACACACAGCCCAGGTGC +
Preference number: 1 (lower is better)
Translates to: SRCSRAKVSASQPER*LTSCLLTTHTQPRC
Trigger: GCACCTGGGCTGTGTGTGTGTGGTCAATAAACAGCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAGACCTTTGCTCTTGAGCACCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 90 bp GCTCTTGAGCCATTTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTaGTTGGAAAATGGCAAGTGGGATGGCCACTATGATCCACTCGGC +
Preference number: 1 (lower is better)
Translates to: ALEPFPEKVLPHRGL*LENGKWDGHYDPLG
Trigger: GCCGAGTGGATCATAGTGGCCATCCCACTTGCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATGGCTCAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672002.1
3UTR CCA 90 bp AGCAGGGCTCACAAGCCAAAATCCAGATTCTCACGGGTTAGGGTCTaGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGAGGCTG +
Preference number: 1 (lower is better)
Translates to: SRAHKPKSRFSRVRV*IPGETSPQTAPVRL
Trigger: CAGCCTCACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCTGGATTTTGGCTTGTGAGCCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp ATCGAAAAGTGGCCCTGGTTAGAAAGACTCTGTGTGAAGTACCTCTaGCCACAGGGAGGTCAGAGGCAGCACACTGAACAGTCGCCAGGG +
Preference number: 1 (lower is better)
Translates to: IEKWPWLERLCVKYL*PQGGQRQHTEQSPG
Trigger: CCCTGGCGACTGTTCAGTGTGCTGCCTCTGACCTCCCTGTGGCCAGAGGTACTTCACACAGAGTCTTTCTAACCAGGGCCACTTTTCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR CCA 90 bp TCTTCCAGCGTGCTGCCCTTGAGGAAGGCCTCAAACACCGAGGATTaGAAGATCTTAATCAGCTGCAGTTCCCCGCGGCGTTTGACCTCA +
Preference number: 1 (lower is better)
Translates to: SSSVLPLRKASNTED*KILISCSSPRRLTS
Trigger: TGAGGTCAAACGCCGCGGGGAACTGCAGCTGATTAAGATCTTCCAATCCTCGGTGTTTGAGGCCTTCCTCAAGGGCAGCACGCTGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 90 bp ATTTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTGCTTGGAAAATaGCAAGTGGGATGGCCCTGGGTAAGGAAGACAGGCACACAGCTC +
Preference number: 1 (lower is better)
Translates to: ISGESASSPWALLGK*QVGWPWVRKTGTQL
Trigger: GAGCTGTGTGCCTGTCTTCCTTACCCAGGGCCATCCCACTTGCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 90 bp GCTCCTCCTTGTAGGCGAGCAGGAATCGCTGGATGGCTCTGCAGATaGTCTTCAGGTCAGTTTCTGCCCGAACTTCGAAGGTGTGTTTGG +
Preference number: 1 (lower is better)
Translates to: APPCRRAGIAGWLCR*SSGQFLPELRRCVW
Trigger: CCAAACACACCTTCGAAGTTCGGGCAGAAACTGACCTGAAGACCATCTGCAGAGCCATCCAGCGATTCCTGCTCGCCTACAAGGAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 90 bp TTGAGGAAGGCCTCAAACACCGAGGATTGGAAGATCTTAATCAGCTaGAGTTCCCCGCGGCGTTTGACCTCAAAGCCCTTGAGCTCAGCC +
Preference number: 1 (lower is better)
Translates to: LRKASNTEDWKILIS*SSPRRLTSKPLSSA
Trigger: GGCTGAGCTCAAGGGCTTTGAGGTCAAACGCCGCGGGGAACTGCAGCTGATTAAGATCTTCCAATCCTCGGTGTTTGAGGCCTTCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 90 bp CCAGGGACCAGGCCGGACCCCCACAGTGGTAAAGACAATAGACTATaGAAAACTCGCCACACAGTGGTCTCTGGCTCTGCCATTAAGACT +
Preference number: 1 (lower is better)
Translates to: PGTRPDPHSGKDNRL*KTRHTVVSGSAIKT
Trigger: AGTCTTAATGGCAGAGCCAGAGACCACTGTGTGGCGAGTTTTCCATAGTCTATTGTCTTTACCACTGTGGGGGTCCGGCCTGGTCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR CCA 90 bp CCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTaGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCACACGTAT +
Preference number: 1 (lower is better)
Translates to: PTSTRRSRSRFSLFT*FVMLVSRDSTLHTY
Trigger: ATACGTGTGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp AGTGCTTCCTCACCGTGGGCTCTGCTTGGAAAATGGCAAGTGGGATaGCCCTGGGTAAGGAAGACAGGCACACAGCTCAGTAACAGTGAA +
Preference number: 1 (lower is better)
Translates to: SASSPWALLGKWQVG*PWVRKTGTQLSNSE
Trigger: TTCACTGTTACTGAGCTGTGTGCCTGTCTTCCTTACCCAGGGCCATCCCACTTGCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 90 bp TTGAGCCATTTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTGCTTaGAAAATGGCAAGTGGGATGGCCACTATGATCCACTCGGCTCCA +
Preference number: 1 (lower is better)
Translates to: LSHFRRKCFLTVGSA*KMASGMATMIHSAP
Trigger: TGGAGCCGAGTGGATCATAGTGGCCATCCCACTTGCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATGGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672002.1
3UTR TCA 90 bp CCCCGTAATCTTCCAGCTTCCGAGACATGGAACGGTTCTCAGAGATaGGCTCGAATAGCTCAGAGTCAGGCATGTTGGCTGCCTTGCTGT +
Preference number: 1 (lower is better)
Translates to: PRNLPASETWNGSQR*ARIAQSQACWLPCC
Trigger: ACAGCAAGGCAGCCAACATGCCTGACTCTGAGCTATTCGAGCTCATCTCTGAGAACCGTTCCATGTCTCGGAAGCTGGAAGATTACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 90 bp CACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTaGGAACCGGGGAGGACAGGAAACATCTCTGAGAGCTCAGTGGAG +
Preference number: 1 (lower is better)
Translates to: HTYLMNSRAGLLSSK*EPGRTGNISESSVE
Trigger: CTCCACTGAGCTCTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp TTATTGAACTCCTGCTCTTGCTTGTTGGGGAAGATGATGTTGGCGTaGAAGGCCTGCACCATCAGCAAGGCCTCACACAGAGTGCCAGAG +
Preference number: 1 (lower is better)
Translates to: LLNSCSCLLGKMMLA*KACTISKASHRVPE
Trigger: CTCTGGCACTCTGTGTGAGGCCTTGCTGATGGTGCAGGCCTTCCACGCCAACATCATCTTCCCCAACAAGCAAGAGCAGGAGTTCAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 90 bp TCCTCACCGTGGGCTCTGCTTGGAAAATGGCAAGTGGGATGGCCCTaGGTAAGGAAGACAGGCACACAGCTCAGTAACAGTGAAAATCAC +
Preference number: 1 (lower is better)
Translates to: SSPWALLGKWQVGWP*VRKTGTQLSNSENH
Trigger: GTGATTTTCACTGTTACTGAGCTGTGTGCCTGTCTTCCTTACCCAGGGCCATCCCACTTGCCATTTTCCAAGCAGAGCCCACGGTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR TCA 90 bp AGAAGTGCATCACCTGGTTGTCTGCATAGATGTTGTGGTACTGGGTaGTCTCCTTCACCCAGCCCACGACCATGCTCTTCAGGATCCCTT +
Preference number: 1 (lower is better)
Translates to: RSASPGCLHRCCGTG*SPSPSPRPCSSGSL
Trigger: AAGGGATCCTGAAGAGCATGGTCGTGGGCTGGGTGAAGGAGATCACCCAGTACCACAACATCTATGCAGACAACCAGGTGATGCACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR CCA 90 bp GTTTGGTGCCCTGTGAAATTGGCCTTTCTTCTTTCTGCTTCCAGCTaGTCCTGTGTGGAGGTGAAGGACAAGGGCTGCAGTGAGCCAAAA +
Preference number: 1 (lower is better)
Translates to: VWCPVKLAFLLSASS*SCVEVKDKGCSEPK
Trigger: TTTTGGCTCACTGCAGCCCTTGTCCTTCACCTCCACACAGGACCAGCTGGAAGCAGAAAGAAGAAAGGCCAATTTCACAGGGCACCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp CAGGACCCCATAGTTGATCTTGTCAGCCACACAGATAGGCACCAGTaGGAATTCCTCCAAGACAGGAATTTCACTGGCCAGCCTCTTCAG +
Preference number: 1 (lower is better)
Translates to: QDPIVDLVSHTDRHQ*EFLQDRNFTGQPLQ
Trigger: CTGAAGAGGCTGGCCAGTGAAATTCCTGTCTTGGAGGAATTCCCACTGGTGCCTATCTGTGTGGCTGACAAGATCAACTATGGGGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR TCA 90 bp GTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTaGGAGCTCAGTGGAGTTCCGAGAGCCTGTGACTTTCTTCTGAAT +
Preference number: 1 (lower is better)
Translates to: VIEQQVGTGEDRKHL*ELSGVPRACDFLLN
Trigger: ATTCAGAAGAAAGTCACAGGCTCTCGGAACTCCACTGAGCTCTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp CTCGTCGGGCTCCATGGGAATAATGGTGCACAGAGCAAAGATGAATaGGTGGACGTACTTCATGTACAGGTAGTAAGTGGCGACAGCATC +
Preference number: 1 (lower is better)
Translates to: LVGLHGNNGAQSKDE*VDVLHVQVVSGDSI
Trigger: GATGCTGTCGCCACTTACTACCTGTACATGAAGTACGTCCACCCATTCATCTTTGCTCTGTGCACCATTATTCCCATGGAGCCCGACGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR GCA 90 bp TTTCATACTTGTTTGGTGCCCTGTGAAATTGGCCTTTCTTCTTTCTaGTTCCAGCTGGTCCTGTGTGGAGGTGAAGGACAAGGGCTGCAG +
Preference number: 1 (lower is better)
Translates to: FHTCLVPCEIGLSSF*FQLVLCGGEGQGLQ
Trigger: CTGCAGCCCTTGTCCTTCACCTCCACACAGGACCAGCTGGAAGCAGAAAGAAGAAAGGCCAATTTCACAGGGCACCAAACAAGTATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR CCA 90 bp CCCACAGTGGTAAAGACAATAGACTATGGAAAACTCGCCACACAGTaGTCTCTGGCTCTGCCATTAAGACTAAGGGAAGCCCAATGGACC +
Preference number: 1 (lower is better)
Translates to: PTVVKTIDYGKLATQ*SLALPLRLREAQWT
Trigger: GGTCCATTGGGCTTCCCTTAGTCTTAATGGCAGAGCCAGAGACCACTGTGTGGCGAGTTTTCCATAGTCTATTGTCTTTACCACTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR CCA 90 bp GTCATTGGTGAAGCCTTCCTTGACCATGATGTTCAACATGGCGCCTaGGTAGGAGATGGTCACTTTGGGCTTCTTCACATTGGTCGTCTT +
Preference number: 1 (lower is better)
Translates to: VIGEAFLDHDVQHGA*VGDGHFGLLHIGRL
Trigger: AAGACGACCAATGTGAAGAAGCCCAAAGTGACCATCTCCTACCCAGGCGCCATGTTGAACATCATGGTCAAGGAAGGCTTCACCAATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR TCA 90 bp GATGCCTCACACATCATACTCAGTAGAGCTGGCTGGAGATCCCTGTaGTGTACCTTTGGTCACATCGAAAAGTGGCCCTGGTTAGAAAGA +
Preference number: 1 (lower is better)
Translates to: DASHIILSRAGWRSL*CTFGHIEKWPWLER
Trigger: TCTTTCTAACCAGGGCCACTTTTCGATGTGACCAAAGGTACATCACAGGGATCTCCAGCCAGCTCTACTGAGTATGATGTGTGAGGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR TCA 90 bp CTGGGTAGGAGATGGTCACTTTGGGCTTCTTCACATTGGTCGTCTTaGAGACAAAATTTTCTGGGAAGCTGTTGGGCAGGACGCACCATA +
Preference number: 1 (lower is better)
Translates to: LGRRWSLWASSHWSS*RQNFLGSCWAGRTI
Trigger: TATGGTGCGTCCTGCCCAACAGCTTCCCAGAAAATTTTGTCTTCAAGACGACCAATGTGAAGAAGCCCAAAGTGACCATCTCCTACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 90 bp ACATGTCCTCTGGCACTGAATACTCATAGAGATTGTAGACCATGTTaGAGCGAGGAAGGACCCGATTTACCTTGCGATACGAAGCACCCT +
Preference number: 1 (lower is better)
Translates to: TCPLALNTHRDCRPC*SEEGPDLPCDTKHP
Trigger: AGGGTGCTTCGTATCGCAAGGTAAATCGGGTCCTTCCTCGCTCCAACATGGTCTACAATCTCTATGAGTATTCAGTGCCAGAGGACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR TCA 90 bp AATCCAGAATTGCTCGAATATCAAAGTCTTGAAGGGAAGAGCTCTTaGGCCATTTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTGCTT +
Preference number: 1 (lower is better)
Translates to: NPELLEYQSLEGKSS*AISGESASSPWALL
Trigger: AAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATGGCTCAAGAGCTCTTCCCTTCAAGACTTTGATATTCGAGCAATTCTGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR TCA 90 bp AGCGTTGATCTCGTTGATGTGTTCCTGGTACATGTCCTCTGGCACTaGATACTCATAGAGATTGTAGACCATGTTGGAGCGAGGAAGGAC +
Preference number: 1 (lower is better)
Translates to: SVDLVDVFLVHVLWH*ILIEIVDHVGARKD
Trigger: GTCCTTCCTCGCTCCAACATGGTCTACAATCTCTATGAGTATTCAGTGCCAGAGGACATGTACCAGGAACACATCAACGAGATCAACGCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 90 bp ACAGCTGTTCACAAACATCAATGTATACATCTGCGTGCATATGTATaGACAAACATGCCTACAGGTTCCTCGGGGAGTAACACGTGCGTA +
Preference number: 1 (lower is better)
Translates to: TAVHKHQCIHLRAYV*TNMPTGSSGSNTCV
Trigger: TACGCACGTGTTACTCCCCGAGGAACCTGTAGGCATGTTTGTGCATACATATGCACGCAGATGTATACATTGATGTTTGTGAACAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp AAGGTGATCATTCCGGGAAGGGCTCCGACCGCCCCCTCGGCCTCCTGGGAGAGCCACGGGGGTGCTCCCTaGAGCACTGCGCCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: KVIIPGRAPTAPSASWESHGGAP*STAPQP
Trigger: GGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTG...GCTCTCCCAGGAGGCCGAGGGGGCGGTCGGAGCCCTTCCCGGAATGATCACCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CAA 90 bp CAGGGTGGTCAGTGGTCTGGTCACTGGAAGCACGGGGATGTGGCCTaGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGGGCCC +
Preference number: 2 (lower is better)
Translates to: QGGQWSGHWKHGDVA*ASGGLARTQRHPGP
Trigger: GGGCCCCGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTGCTTCCAGTGACCAGACCACTGACCACCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCGCCCCCTCCCTCCTGTaGGGCTCTCGTCTGGGGTGT +
Preference number: 2 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGAAPSLL*GSRLGC
Trigger: ACACCCCAGACGAGAGCCTCACAGGAGGGAGGGGGC...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGTGCGACTGGCTGGCATaGACTCGCCCCTCCACTGCC +
Preference number: 2 (lower is better)
Translates to: HSQPRSRPASSGALARPGCDWLA*TRPSTA
Trigger: GGCAGTGGAGGGGCGAGTTCATGCCAGCCAGTCGCA...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp AGGGCGGGAGGCTGCCCCAAGATTTCCTGCCAGGGCACAGTCGGCGTGAGGTCCGCCCCACCAGGGCCTTaGGAACCCGTCTCGTCTCAG +
Preference number: 2 (lower is better)
Translates to: RAGGCPKISCQGTVGVRSAPPGP*EPVSSQ
Trigger: CTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGGC...GGACCTCACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCAGCCTCCCGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672002.1
ENST00000672742.1
3UTR CAA 90 bp CCACCCAGGTCAGGGCGGGCTGTAGGGGACAGCCAGAGCAGGTGGTaGTGGCGCTGGAGGTGGCGGGCAAAGAAGAGGTCGGAGCCGAAT +
Preference number: 2 (lower is better)
Translates to: PPRSGRAVGDSQSRW*WRWRWRAKKRSEPN
Trigger: ATTCGGCTCCGACCTCTTCTTTGCCCGCCACCTCCAGCGCCACAACCACCTGCTCTGGCTGTCCCCTACAGCCCGCCCTGACCTGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp GGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACAATCCTCCTCACGGGGGTaGTCCCTGGAGCACTGCGCC +
Preference number: 2 (lower is better)
Translates to: GAAGPAAATSSCGTGARQSSSRG*SLEHCA
Trigger: GGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGA...TTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GAAGCACGTAGGAGCGGCAGGGGTCTCGGAACTGGGCCTCCTCGGAGAACTCGCTGGCATCAGGAGGCCTaGCACGGACGCAGAGGCACC +
Preference number: 2 (lower is better)
Translates to: EARRSGRGLGTGPPRRTRWHQEA*HGRRGT
Trigger: GGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCA...GCGAGTTCTCCGAGGAGGCCCAGTTCCGAGACCCCTGCCGCTCCTACGTGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGAAGACACGAGCCTCCTaGGGAGCCTGTGGGGCCCCC +
Preference number: 2 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQKTRAS*GACGAP
Trigger: GGGGGCCCCACAGGCTCCCCAGGAGGCTCGTGTCTT...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGCAGGGGTCTCGGAACTaGGCCTCCTCGGAGAACTCG +
Preference number: 2 (lower is better)
Translates to: ALAASLTACFFRCSGEARQGSRN*ASSENS
Trigger: CGAGTTCTCCGAGGAGGCCCAGTTCCGAGACCCCTG...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CAA 90 bp TTCCTGCGGGCGAGGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTaGTGGAACCGGAGCCAGACAAGCCATTCCTCCTGGCTGGTTCCC +
Preference number: 2 (lower is better)
Translates to: FLRARRCRACSCHFF*WNRSQTSHSSWLVP
Trigger: GGGAACCAGCCAGGAGGAATGGCTTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCTCGCCCGCAGGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CGAGGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACACAAACTGCTCCTGTaGGGCTGTGGGGCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: RGAAGPAAATSSCGTGARHKLLL*GCGASP
Trigger: TGGGCTGGCCCCACAGCCTCACAGGAGCAGTTTGTG...TCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CTCCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGGGGGGATGCTCAGCCTaGTGCAGTGCAAGTCACTGC +
Preference number: 2 (lower is better)
Translates to: LLLTGVLPGALRLSPSFMGGCSA*CSASHC
Trigger: GCAGTGACTTGCACTGCATCAGGCTGAGCATCCCCC...CATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGAGCTCCCAGCTGGACTaGACAGCGATGAGTGTGGGC +
Preference number: 2 (lower is better)
Translates to: ALAASLTACFFRCSGEARSSQLD*TAMSVG
Trigger: GCCCACACTCATCGCTGTTCAGTCCAGCTGGGAGCT...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp AAGGTGATCATTCCGGGAAGGGCTCCGACCGCCCCCTCGGCCTCCTGGGAGAGCCCCCACCAGGTGTGGTaGAGGAAGCAACAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: KVIIPGRAPTAPSASWESPHQVW*RKQQRP
Trigger: AGGCCTCTGTTGCTTCCTGCACCACACCTGGTGGGG...GCTCTCCCAGGAGGCCGAGGGGGCGGTCGGAGCCCTTCCCGGAATGATCACCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAAGTCTCCCGCGCAGCTaGAGTACACAGGCATGCTGG +
Preference number: 2 (lower is better)
Translates to: PPHGGAPWSTAPQPVLHASLPRS*STQACW
Trigger: CCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGACT...TGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCACCAGCGTCATCTCGATGGCAGAGGAGTCGTAGGGCGCCTGACAGTTGGAGCGCCAGAGTCTGGGGCTaGTCCGTGGCCATCCGGCAC +
Preference number: 2 (lower is better)
Translates to: PPASSRWQRSRRAPDSWSARVWG*SVAIRH
Trigger: GTGCCGGATGGCCACGGAGCAGCCCCAGACTCTGGC...GCTCCAACTGTCAGGCGCCCTACGACTCCTCTGCCATCGAGATGACGCTGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp TCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTAGGCGCTGCCGGGCCTaGAGCTGCCACTTCTTCTTG +
Preference number: 2 (lower is better)
Translates to: SSRGCSLEHCASARPSCSRRCRA*SCHFFL
Trigger: CAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCT...ACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGTTCCTCCCCGTTCCCTaGCCTGGGGTCACAGGTTTG +
Preference number: 2 (lower is better)
Translates to: ALAASLTACFFRCSGEARFLPVP*PGVTGL
Trigger: CAAACCTGTGACCCCAGGCCAGGGAACGGGGAGGAA...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp AACCCCAGACTCGAGGGCCTCCACGTGGCCCCCGACGTAGGTCTCAGAGTCCAGTACGTGGCCAGAGTCTaGGGCTGCTCCGTGGCCATC +
Preference number: 2 (lower is better)
Translates to: NPRLEGLHVAPDVGLRVQYVARV*GCSVAI
Trigger: GATGGCCACGGAGCAGCCCCAGACTCTGGCCACGTA...CTGGACTCTGAGACCTACGTCGGGGGCCACGTGGAGGCCCTCGAGTCTGGGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp GTCTCCCGCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCATCCCGCTCCCTCCTGTaGCGTCTGAGCTCCCTGAAA +
Preference number: 2 (lower is better)
Translates to: VSRAAAVHRHAGLLHPAASRSLL*RLSSLK
Trigger: TTTCAGGGAGCTCAGACGTCACAGGAGGGAGCGGGA...TGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CCTCCGGGTCTAGCTCCACGGGATCATAGCCTAGCTTGGCCTTGGCGGCCGCCTCCAGGGCAGGGTTATTaGGCAGCAAGTGGGAACCGG +
Preference number: 2 (lower is better)
Translates to: PPGLAPRDHSLAWPWRPPPGQGY*AASGNR
Trigger: CCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGG...AGGCGGCCGCCAAGGCCAAGCTAGGCTATGATCCCGTGGAGCTAGACCCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCTCAGAGGCAGCACACTaGACAGTCGCCAGGGACCAG +
Preference number: 2 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLSEAAH*TVARDQ
Trigger: CTGGTCCCTGGCGACTGTTCAGTGTGCTGCCTCTGA...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR-3UTR TCA 90 bp AAGACCTGGGTGTGGATGGTGAGGGCGAAGTCTCCCGCGCAGCTGCAGTACACACCTGGGTGTGGATGGTaGGGGCGAAGTCTCCCGCGC +
Preference number: 2 (lower is better)
Translates to: KTWVWMVRAKSPAQLQYTPGCGW*GRSLPR
Trigger: GCGCGGGAGACTTCGCCCTCACCATCCACACCCAGG...TGTGTACTGCAGCTGCGCGGGAGACTTCGCCCTCACCATCCACACCCAGGTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CCTCCGGGTCTAGCTCCACGGGATCATAGCCTAGCTTGGCCTTGGCGGCCGCCTCCTTGGCGGCCGCCTTaGGATTATGACTGCCCACAG +
Preference number: 2 (lower is better)
Translates to: PPGLAPRDHSLAWPWRPPPWRPP*DYDCPQ
Trigger: CTGTGGGCAGTCATAATCTCAAGGCGGCCGCCAAGG...AGGCGGCCGCCAAGGCCAAGCTAGGCTATGATCCCGTGGAGCTAGACCCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp GAAGCACGTAGGAGCGGCAGGGGTCTCGGAACTGGGCCTCCTCGGAGAACTCGCGGCGGTTGGTCAGGATaGTGTTGGGGTACATGGCCC +
Preference number: 2 (lower is better)
Translates to: EARRSGRGLGTGPPRRTRGGWSG*CWGTWP
Trigger: GGGCCATGTACCCCAACATCATCCTGACCAACCGCC...GCGAGTTCTCCGAGGAGGCCCAGTTCCGAGACCCCTGCCGCTCCTACGTGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp TCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCGGTGAAAGGATCGCTTaGGCCCAGGAGTTCGAGGCC +
Preference number: 2 (lower is better)
Translates to: SLTACFFRCSGEARATSCGERIA*AQEFEA
Trigger: GGCCTCGAACTCCTGGGCTCAAGCGATCCTTTCACC...GCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672742.1
3UTR-3UTR GCA 90 bp CTCCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGAGCTGTGGGTTCTTCTaGAGCAGCCACTCCAGGGTC +
Preference number: 2 (lower is better)
Translates to: LLLTGVLPGALRLSPSFMSCGFF*SSHSRV
Trigger: GACCCTGGAGTGGCTGCTGCAGAAGAACCCACAGCT...CATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp GTCTCCCGCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCATGCAGTGCAAGTCACTaGCAACGAGCGCCCACAGCC +
Preference number: 2 (lower is better)
Translates to: VSRAAAVHRHAGLLHPAACSASH*QRAPTA
Trigger: GGCTGTGGGCGCTCGTTGGCAGTGACTTGCACTGCA...TGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GGAAGCCTATCTCCTGCTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCACCCCGTTCCCTGGCCTaGGGTCACAGGTTTGGACAG +
Preference number: 2 (lower is better)
Translates to: GSLSPAACSDRGLLPGPPPRSLA*GHRFGQ
Trigger: CTGTCCAAACCTGTGACCCCAGGCCAGGGAACGGGG...TGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAGCAGGAGATAGGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp CGAGGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGATTCCTCCCCGTTCCCTaGCCTGGGGTCACAGGTTTG +
Preference number: 2 (lower is better)
Translates to: RGAAGPAAATSSCGTGARFLPVP*PGVTGL
Trigger: CAAACCTGTGACCCCAGGCCAGGGAACGGGGAGGAA...TCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCAGGGGTCTCGGAACTaGGCCTCCTCGGAGAACTCG +
Preference number: 2 (lower is better)
Translates to: AQLQYTGMLVSFTPRHFRQGSRN*ASSENS
Trigger: CGAGTTCTCCGAGGAGGCCCAGTTCCGAGACCCCTG...CCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGTGTTCCATGAAGACCTaGGTGTGGATGGTGAGGGCG +
Preference number: 2 (lower is better)
Translates to: HGDVALASGGLARTQRHPCSMKT*VWMVRA
Trigger: CGCCCTCACCATCCACACCCAGGTCTTCATGGAACA...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GGCACTGGCAGCCTGACCACCCGTGATCATGTCCTCCAGGGAGGCCTGCTGGATCTGAACAGGCCGGCCTaGCTGGTCTCGCTGATCTGC +
Preference number: 2 (lower is better)
Translates to: GTGSLTTRDHVLQGGLLDLNRPA*LVSLIC
Trigger: GCAGATCAGCGAGACCAGCCAGGCCGGCCTGTTCAG...ATCCAGCAGGCCTCCCTGGAGGACATGATCACGGGTGGTCAGGCTGCCAGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GTCTCCCGCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCAAGGTGGTTGTGGCGCTaGAGGTGGCGGGCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: VSRAAAVHRHAGLLHPAARWLWR*RWRAKK
Trigger: CTTCTTTGCCCGCCACCTCCAGCGCCACAACCACCT...TGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAAAGCATTCACTGCGTaGGAAACGGCGCCCAGGGCA +
Preference number: 2 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGAKAFTA*ETAPRA
Trigger: TGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTT...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp GATCCCGAAGAGCGCTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGGCCCCCTCCCTCCTGTaGGGCTCTCGTCTGGGGTGT +
Preference number: 2 (lower is better)
Translates to: DPEERFVGLCVVVQVDMAAPSLL*GSRLGC
Trigger: ACACCCCAGACGAGAGCCTCACAGGAGGGAGGGGGC...CGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAGCGCTCTTCGGGATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGAATCCTGAGAGAAGGTaGTCATTCCGGGAAGGGCTC +
Preference number: 2 (lower is better)
Translates to: HGDVALASGGLARTQRHPNPERR*SFREGL
Trigger: GAGCCCTTCCCGGAATGATCACCTTCTCTCAGGATT...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGTTCCGATCTGTTCCATaGAGACCTGGGTGTGGATGG +
Preference number: 2 (lower is better)
Translates to: HGDVALASGGLARTQRHPFRSVP*RPGCGW
Trigger: CCATCCACACCCAGGTCTTCATGGAACAGATCGGAA...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGCGTCCAGGTGGTAGATaGGTGGACACTCGATGCGGC +
Preference number: 2 (lower is better)
Translates to: PGALRLSPSFMQWYTATMRPGGR*VDTRCG
Trigger: GCCGCATCGAGTGTCCACTCATCTACCACCTGGACG...CATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp AGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCAGACCAGGTCCTGCAGCTCTGCTTCCCAGCCTaGAAGGTGCCTCACCAGCTG +
Preference number: 2 (lower is better)
Translates to: RHAGLLHPAALQADQVLQLCFPA*KVPHQL
Trigger: CAGCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAG...CTGCAGGACCTGGTCTGCCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp GCTGGGCATCTGGTTGCTGCGCACAGTGTCCAGCACAAAGACGGATGCCCTGCGGCCTCGCTCACGGCCTaGTTCTTCAGGTGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: AGHLVAAHSVQHKDGCPAASLTA*FFRCSG
Trigger: GCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGC...CGCAGGGCATCCGTCTTTGTGCTGGACACTGTGCGCAGCAACCAGATGCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGCCCCACCAGGTGTGGTaGAGGAAGCAACAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQPHQVW*RKQQRP
Trigger: AGGCCTCTGTTGCTTCCTGCACCACACCTGGTGGGG...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCTCCACGTTGGATTCCTCCGCCTCTTCCTCCTCCTCCCCATCTCTTTCCTCCTTCCTCCTCACGGGGGTaGTCCCTGGAGCACTGCGCC +
Preference number: 2 (lower is better)
Translates to: PPRWIPPPLPPPPHLFPPSSSRG*SLEHCA
Trigger: GGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGA...AGGAGGAAAGAGATGGGGAGGAGGAGGAAGAGGCGGAGGAATCCAACGTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp AGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCAGACCAGGTCCTGCAGAGTCTCCCGCGCAGCTaGAGTACACAGGCATGCTGG +
Preference number: 2 (lower is better)
Translates to: RHAGLLHPAALQADQVLQSLPRS*STQACW
Trigger: CCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGACT...CTGCAGGACCTGGTCTGCCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp GAAGCACGTAGGAGCGGCAGGGGTCTCGGAACTGGGCCTCCTCGGAGAACTCGCGCACCTCCATGTTCTTaGAGCGCTTCACCTCAGCCG +
Preference number: 2 (lower is better)
Translates to: EARRSGRGLGTGPPRRTRAPPCS*SASPQP
Trigger: CGGCTGAGGTGAAGCGCTGCAAGAACATGGAGGTGC...GCGAGTTCTCCGAGGAGGCCCAGTTCCGAGACCCCTGCCGCTCCTACGTGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp GCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCTCATCTCGAAGGCCTaGGACAGGCAGGTGTCCAGG +
Preference number: 2 (lower is better)
Translates to: AQLQYTGMLVSFTPRHFRLISKA*DRQVSR
Trigger: CCTGGACACCTGCCTGTCGCAGGCCTTCGAGATGAG...CCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGCAGTGGTCTGGTCACTaGAAGCACGGGGATGTGGCC +
Preference number: 2 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQQWSGH*KHGDVA
Trigger: GGCCACATCCCCGTGCTTCCAGTGACCAGACCACTG...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GGAAGCCTATCTCCTGCTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCAGGGTGGTCAGTGGTCTaGTCACTGGAAGCACGGGGA +
Preference number: 2 (lower is better)
Translates to: GSLSPAACSDRGLLPGPPGWSVV*SLEARG
Trigger: TCCCCGTGCTTCCAGTGACCAGACCACTGACCACCC...TGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAGCAGGAGATAGGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GGGCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAAGTCAGGGTGGTCAGTaGTCTGGTCACTGGAAGCAC +
Preference number: 2 (lower is better)
Translates to: GHSQPRSRPASSGALARPSQGGQ*SGHWKH
Trigger: GTGCTTCCAGTGACCAGACCACTGACCACCCTGACT...TGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCACTTCTTCAGGTGCTCTaGCGAGGCCAGGGCCACATC +
Preference number: 2 (lower is better)
Translates to: PTRALGTRLVSEPNLREPLLQVL*RGQGHI
Trigger: GATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAG...TGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCACCACCCCACCAGGTGTaGTGCAGGAAGCAACAGAGG +
Preference number: 2 (lower is better)
Translates to: PTRALGTRLVSEPNLREPPPHQV*CRKQQR
Trigger: CCTCTGTTGCTTCCTGCACCACACCTGGTGGGGTGG...TGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp AAGGTGATCATTCCGGGAAGGGCTCCGACCGCCCCCTCGGCCTCCTGGGAGAGCATGAACCACCGCTGGTaGGTAATGCGAGTAGCTGCC +
Preference number: 2 (lower is better)
Translates to: KVIIPGRAPTAPSASWESMNHRW*VMRVAA
Trigger: GGCAGCTACTCGCATTACCCACCAGCGGTGGTTCAT...GCTCTCCCAGGAGGCCGAGGGGGCGGTCGGAGCCCTTCCCGGAATGATCACCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR-3UTR CCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGACTCCACGTAAGCGATaGCATCTTCCACACGGCGCT +
Preference number: 2 (lower is better)
Translates to: HSQPRSRPASSGALARPGTPRKR*HLPHGA
Trigger: AGCGCCGTGTGGAAGATGCCATCGCTTACGTGGAGT...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCACCGTCCTTCATGCAGTaGTACACGGCCACGATGTAC +
Preference number: 2 (lower is better)
Translates to: PPHGGAPWSTAPQPVLHAPSFMQ*YTATMY
Trigger: GTACATCGTGGCCGTGTACCACTGCATGAAGGACGG...TGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp AGGTGCTCAAGAGCAAAGGTCTCTGCTTCCCAGCCTGAAAGGTGCCTCACCAGCCACGGGGGTGCTCCCTaGAGCACTGCGCCTCAGCCC +
Preference number: 2 (lower is better)
Translates to: RCSRAKVSASQPERCLTSHGGAP*STAPQP
Trigger: GGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTG...GCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAGACCTTTGCTCTTGAGCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGCTAATGGCCCAGCTGTaGGTTCTTCTGCAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: ALAASLTACFFRCSGEARLMAQL*VLLQQP
Trigger: TGGCTGCTGCAGAAGAACCCACAGCTGGGCCATTAG...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp AGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCAGACCAGGTCCTGCAGCTGAGGCAGTCCATGTaGATGCACTGGGGCGCCTTG +
Preference number: 2 (lower is better)
Translates to: RHAGLLHPAALQADQVLQLRQSM*MHWGAL
Trigger: CAAGGCGCCCCAGTGCATCCACATGGACTGCCTCAG...CTGCAGGACCTGGTCTGCCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCCTGAGGCAGTCCATGTaGATGCACTGGGGCGCCTTG +
Preference number: 2 (lower is better)
Translates to: APGSMALPVQDPIVDLVSLRQSM*MHWGAL
Trigger: CAAGGCGCCCCAGTGCATCCACATGGACTGCCTCAG...GCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCATGAAAGGCCCGAGCTaGCCCCTCTGGGAACAAGGG +
Preference number: 2 (lower is better)
Translates to: APGSMALPVQDPIVDLVSMKGPS*PLWEQG
Trigger: CCCTTGTTCCCAGAGGGGCCAGCTCGGGCCTTTCAT...GCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp CTCCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGGCTCTGCTTGGAAAATaGCAAGTGGGATGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: LLLTGVLPGALRLSPSFMALLGK*QVGWPW
Trigger: CCAGGGCCATCCCACTTGCCATTTTCCAAGCAGAGC...CATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GATCATGCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCGGCGTGAGGTCCTaGGACTCCTCCTGGCTCTCC +
Preference number: 2 (lower is better)
Translates to: DHAPGSMALPVQDPIVDLVGVRS*DSSWLS
Trigger: GGAGAGCCAGGAGGAGTCCCAGGACCTCACGCCGAC...AAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCATGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCACCAGCGTCATCTCGATGGCAGAGGAGTCGTAGGGCGCCTGACAGTTGGAGCCTGTCTCATCGTAGCTaGCCGGGGCACTGGCAGCCT +
Preference number: 2 (lower is better)
Translates to: PPASSRWQRSRRAPDSWSLSHRS*PGHWQP
Trigger: AGGCTGCCAGTGCCCCGGCCAGCTACGATGAGACAG...GCTCCAACTGTCAGGCGCCCTACGACTCCTCTGCCATCGAGATGACGCTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CATGAACTCGCCCCTCCACTGCCAGGCCATCTTCCGCTGGCAGTTTGCTCCAGGCCAGGGCAGGGTTATTaGGCAGCAAGTGGGAACCGG +
Preference number: 2 (lower is better)
Translates to: HELAPPLPGHLPLAVCSRPGQGY*AASGNR
Trigger: CCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGG...CCTGGAGCAAACTGCCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGTTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp CTGCAGCAGCCACTCCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCATGCTCTCCGCAGACTaGTGGCTCCTGACCCTCAAC +
Preference number: 2 (lower is better)
Translates to: LQQPLQGLQEVRHAVVLGMLSAD*WLLTLN
Trigger: GTTGAGGGTCAGGAGCCATCAGTCTGCGGAGAGCAT...GCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGGAGTGGCTGCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR-3UTR TCA 90 bp CCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAAATCCTGAGAGAAGGTaGTCATTCCGGGAAGGGCTC +
Preference number: 2 (lower is better)
Translates to: PPHGGAPWSTAPQPVLHANPERR*SFREGL
Trigger: GAGCCCTTCCCGGAATGATCACCTTCTCTCAGGATT...TGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGCCAGGTCCTGCAGGGTaGAGGCCATCAGCTTCTTCT +
Preference number: 2 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQPGPAG*RPSASS
Trigger: AGAAGAAGCTGATGGCCTTCACCCTGCAGGACCTGG...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp GCAGAGAGGATGGCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGTGGACTGAACAGCGATaGGTGTGGGCCCCCGGCGCT +
Preference number: 2 (lower is better)
Translates to: AERMATEASGRSASPGCLWTEQR*VWAPGA
Trigger: AGCGCCGGGGGCCCACACTCATCGCTGTTCAGTCCA...CAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGCCATCCTCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp AGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCAGACCAGGTCCTGCAGTGCAGTACACAGGCATaGTGGTCTCCTTCACCCCGC +
Preference number: 2 (lower is better)
Translates to: RHAGLLHPAALQADQVLQCSTQA*WSPSPR
Trigger: GCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCA...CTGCAGGACCTGGTCTGCCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp CGAGGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACCTCACCGTGGGCTCTaGTTGGAAAATGGCAAGTGG +
Preference number: 2 (lower is better)
Translates to: RGAAGPAAATSSCGTGARPHRGL*LENGKW
Trigger: CCACTTGCCATTTTCCAAGCAGAGCCCACGGTGAGG...TCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGCATTTCCGGAGAAAGTaGTTCCTCACCGTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: ALAASLTACFFRCSGEARHFRRK*FLTVGS
Trigger: AGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATG...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCAGAGAGGATGGCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGTGGCATCAGGAGGCCTaGCACGGACGCAGAGGCACC +
Preference number: 2 (lower is better)
Translates to: AERMATEASGRSASPGCLWHQEA*HGRRGT
Trigger: GGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCA...CAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGCCATCCTCTCTGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACAGTCAGGGTGGTCAGTaGTCTGGTCACTGGAAGCAC +
Preference number: 2 (lower is better)
Translates to: APWSTAPQPVLHAVVHGHSQGGQ*SGHWKH
Trigger: GTGCTTCCAGTGACCAGACCACTGACCACCCTGACT...GTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCATTTGGACAGTCAGGGTaGTCAGTGGTCTGGTCACTG +
Preference number: 2 (lower is better)
Translates to: PPHGGAPWSTAPQPVLHAFGQSG*SVVWSL
Trigger: CAGTGACCAGACCACTGACCACCCTGACTGTCCAAA...TGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCTTGTAGGCGAGCAGGAATCGCTGGATGGCTCTGCAGATGGTCTTCAGGTCAGAAGACACGAGCCTCCTaGGGAGCCTGTGGGGCCCCC +
Preference number: 2 (lower is better)
Translates to: PCRRAGIAGWLCRWSSGQKTRAS*GACGAP
Trigger: GGGGGCCCCACAGGCTCCCCAGGAGGCTCGTGTCTT...CTGACCTGAAGACCATCTGCAGAGCCATCCAGCGATTCCTGCTCGCCTACAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGCCTCAGACAGTAGATaGCAGGGACAAACTAAGGCT +
Preference number: 2 (lower is better)
Translates to: HGDVALASGGLARTQRHPASDSR*QGQTKA
Trigger: AGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGC...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGTGGGTTTGGTCTCCTaGACGTGTTCAAACCACCTT +
Preference number: 2 (lower is better)
Translates to: HGDVALASGGLARTQRHPVGLVS*TCSNHL
Trigger: AAGGTGGTTTGAACACGTCCAGGAGACCAAACCCAC...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCCCCTGGCTGTCCTTCTaGAAGCCTATCTCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: APGSMALPVQDPIVDLVSPWLSF*KPISCC
Trigger: GCAGCAGGAGATAGGCTTCCAGAAGGACAGCCAGGG...GCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GGCATGAACTCGCCCCTCCACTGCCAGGCCATCTTCCGCTGGCAGTTTGCTCCAGACACTCGATGCGGCTaGGAACGTCCTTCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: GMNSPLHCQAIFRWQFAPDTRCG*ERPSGR
Trigger: CCTCCCTGAAGGACGTTCCCAGCCGCATCGAGTGTC...TGGAGCAAACTGCCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGTTCATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACAATCCTGGGACTCCTCCTaGCTCTCCCAAAGAACTCGC +
Preference number: 2 (lower is better)
Translates to: GAAGPAAATSSCGTGARQSWDSS*LSQRTR
Trigger: GCGAGTTCTTTGGGAGAGCCAGGAGGAGTCCCAGGA...TTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp GTCTCCCGCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCAGACCGCCCCATCCTCTaGGAAGGAAGAGTCTTTACA +
Preference number: 2 (lower is better)
Translates to: VSRAAAVHRHAGLLHPAADRPIL*EGRVFT
Trigger: TGTAAAGACTCTTCCTTCTCAGAGGATGGGGCGGTC...TGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGTGCCTGGGTGTGGATGGTaGGGGCGAAGTCTCCCGCGC +
Preference number: 2 (lower is better)
Translates to: PTSTRRSRSRFSLFTWFVPGCGW*GRSLPR
Trigger: GCGCGGGAGACTTCGCCCTCACCATCCACACCCAGG...CACAAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CGAGGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGATTCCGATCTGTTCCATaGAGACCTGGGTGTGGATGG +
Preference number: 2 (lower is better)
Translates to: RGAAGPAAATSSCGTGARFRSVP*RPGCGW
Trigger: CCATCCACACCCAGGTCTTCATGGAACAGATCGGAA...TCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCGTCCGTCAGCTTATTaGACTCCTGCTCTTGCTTGT +
Preference number: 2 (lower is better)
Translates to: HSQPRSRPASSGALARPGRPSAY*TPALAC
Trigger: ACAAGCAAGAGCAGGAGTTCAATAAGCTGACGGACG...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp GATCATGCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGCTGGCAGATGGTGGTaGGACGCTCTTCCACCTTGG +
Preference number: 2 (lower is better)
Translates to: DHAPGSMALPVQDPIVDLAGRWW*DALPPW
Trigger: CCAAGGTGGAAGAGCGTCTCACCACCATCTGCCAGC...AAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCATGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCGCCTCGCTCACGGCCTaGTTCTTCAGGTGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: APVRLWGQPISPCKQVRLASLTA*FFRCSG
Trigger: GCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGC...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp ATGAACCACCGCTGGTGGGTAATGCGAGTAGCTGCCCTCAACCATGCTCTCCGCCTCAACCACGCCCTCTaGAGCAGACCGACGGCTCCT +
Preference number: 2 (lower is better)
Translates to: MNHRWWVMRVAALNHALRLNHAL*SRPTAP
Trigger: AGGAGCCGTCGGTCTGCTGCAGAGGGCGTGGTTGAG...GCGGAGAGCATGGTTGAGGGCAGCTACTCGCATTACCCACCAGCGGTGGTTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR-3UTR GCA 90 bp ACACAGGTCCAGGTCGCGGCAGAAGTTACAGCTGCGGCAGATGACCTCAGGAAGTGCTCCCTGGAGCACTaGGCCTCAGCCCGTCCTTCA +
Preference number: 2 (lower is better)
Translates to: TQVQVAAEVTAAADDLRKCSLEH*ASARPS
Trigger: TGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCA...CTTCCTGAGGTCATCTGCCGCAGCTGTAACTTCTGCCGCGACCTGGACCTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp TCTCTGACTCCAGCTGGTGCTGGATCCGATGGTATTCGCTGCGACTGGCTGGCACAGACCGTGGACTGCTaGCCGGGCCTCCACAAATGG +
Preference number: 2 (lower is better)
Translates to: SLTPAGAGSDGIRCDWLAQTVDC*PGLHKW
Trigger: CCATTTGTGGAGGCCCGGGCAGCAGTCCACGGTCTG...TGCCAGCCAGTCGCAGCGAATACCATCGGATCCAGCACCAGCTGGAGTCAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp GCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCTCAGCCTGATGCAGTaGAAGTCACTGCCAACGAGC +
Preference number: 2 (lower is better)
Translates to: AQLQYTGMLVSFTPRHFRLSLMQ*KSLPTS
Trigger: GCTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAG...CCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp GGCACTGGCAGCCTGACCACCCGTGATCATGTCCTCCAGGGAGGCCTGCTGGATTGGGCATCTGGTTGCTaGGCACAGTGTCCAGCACAA +
Preference number: 2 (lower is better)
Translates to: GTGSLTTRDHVLQGGLLDWASGC*AQCPAQ
Trigger: TTGTGCTGGACACTGTGCGCAGCAACCAGATGCCCA...ATCCAGCAGGCCTCCCTGGAGGACATGATCACGGGTGGTCAGGCTGCCAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCACGGGGATGTGGCCTTaGCATCAGGAGGCCTGGCAC +
Preference number: 2 (lower is better)
Translates to: APVRLWGQPISPCKQVRLTGMWP*HQEAWH
Trigger: GTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp AGGGCGGGAGGCTGCCCCAAGATTTCCTGCCAGGGCACAGTCGGCGTGAGGTCCGAAGCAACAGAGGCCTaGAAAAGCATTCACTGCGTG +
Preference number: 2 (lower is better)
Translates to: RAGGCPKISCQGTVGVRSEATEA*KSIHCV
Trigger: CACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTC...GGACCTCACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCAGCCTCCCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGGCCCCACCAGGGCCTTaGGAACCCGTCTCGTCTCAG +
Preference number: 2 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVAPPGP*EPVSSQ
Trigger: CTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGGC...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGTCACGGGTTAGGGTCTaGATTCCTGGGGAAACCAGC +
Preference number: 2 (lower is better)
Translates to: AQLQYTGMLVSFTPRHFRSRVRV*IPGETS
Trigger: GCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA...CCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGACTCCACGTAAGCGATaGCATCTTCCACACGGCGCT +
Preference number: 2 (lower is better)
Translates to: PGALRLSPSFMQWYTATMTPRKR*HLPHGA
Trigger: AGCGCCGTGTGGAAGATGCCATCGCTTACGTGGAGT...CATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp AAGGTGATCATTCCGGGAAGGGCTCCGACCGCCCCCTCGGCCTCCTGGGAGAGCGTGGGTTTGGTCTCCTaGACGTGTTCAAACCACCTT +
Preference number: 2 (lower is better)
Translates to: KVIIPGRAPTAPSASWESVGLVS*TCSNHL
Trigger: AAGGTGGTTTGAACACGTCCAGGAGACCAAACCCAC...GCTCTCCCAGGAGGCCGAGGGGGCGGTCGGAGCCCTTCCCGGAATGATCACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp AACCCCAGACTCGAGGGCCTCCACGTGGCCCCCGACGTAGGTCTCAGAGTCCAGAAGATGATGTTGGCGTaGAAGGCCTGCACCATCAGC +
Preference number: 2 (lower is better)
Translates to: NPRLEGLHVAPDVGLRVQKMMLA*KACTIS
Trigger: GCTGATGGTGCAGGCCTTCCACGCCAACATCATCTT...CTGGACTCTGAGACCTACGTCGGGGGCCACGTGGAGGCCCTCGAGTCTGGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACAAGATGATGTTGGCGTaGAAGGCCTGCACCATCAGC +
Preference number: 2 (lower is better)
Translates to: APWSTAPQPVLHAVVHGHKMMLA*KACTIS
Trigger: GCTGATGGTGCAGGCCTTCCACGCCAACATCATCTT...GTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp AAGACCTGGGTGTGGATGGTGAGGGCGAAGTCTCCCGCGCAGCTGCAGTACACAGACACTCGATGCGGCTaGGAACGTCCTTCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: KTWVWMVRAKSPAQLQYTDTRCG*ERPSGR
Trigger: CCTCCCTGAAGGACGTTCCCAGCCGCATCGAGTGTC...TGTGTACTGCAGCTGCGCGGGAGACTTCGCCCTCACCATCCACACCCAGGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp TCTCTGACTCCAGCTGGTGCTGGATCCGATGGTATTCGCTGCGACTGGCTGGCATGGCTTCGTCCACCATaGCAGAGGGCTGCAGGCGGT +
Preference number: 2 (lower is better)
Translates to: SLTPAGAGSDGIRCDWLAWLRPP*QRAAGG
Trigger: ACCGCCTGCAGCCCTCTGCCATGGTGGACGAAGCCA...TGCCAGCCAGTCGCAGCGAATACCATCGGATCCAGCACCAGCTGGAGTCAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCAAGTGGGATGGCCCTaGGTAAGGAAGACAGGCACA +
Preference number: 2 (lower is better)
Translates to: AQLQYTGMLVSFTPRHFRQVGWP*VRKTGT
Trigger: TGTGCCTGTCTTCCTTACCCAGGGCCATCCCACTTG...CCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp AGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCAGACCAGGTCCTGCAGGGTCGGAGCCGAATGTaGAGATGTCCTCTGGTAGGT +
Preference number: 2 (lower is better)
Translates to: RHAGLLHPAALQADQVLQGRSRM*RCPLVG
Trigger: ACCTACCAGAGGACATCTCCACATTCGGCTCCGACC...CTGCAGGACCTGGTCTGCCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CAA 90 bp GCAGAATGCGAAGTGCTCGGCCCACCTCCTGGTACACAGCAAGCATaGCCCAGCATGAACCACCGCTGGTGGGTAATGCGAGTAGCTGCC +
Preference number: 2 (lower is better)
Translates to: AECEVLGPPPGTQQA*PSMNHRWWVMRVAA
Trigger: GGCAGCTACTCGCATTACCCACCAGCGGTGGTTCATGCTGGGCAATGCTTGCTGTGTACCAGGAGGTGGGCCGAGCACTTCGCATTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR CAA 90 bp GGCCTCCCAATCTGCTCGATCAGCTCCCGTGCCTGGGTGATGATGTaGGCCCCTGTGAAGCAGACGATGCCAGCCATCTCCATGGAGTAC +
Preference number: 2 (lower is better)
Translates to: GLPICSISSRAWVMM*APVKQTMPAISMEY
Trigger: GTACTCCATGGAGATGGCTGGCATCGTCTGCTTCACAGGGGCCAACATCATCACCCAGGCACGGGAGCTGATCGAGCAGATTGGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp GAAGCACGTAGGAGCGGCAGGGGTCTCGGAACTGGGCCTCCTCGGAGAACTCGCAATGGATGCTGCTGGTaGTGTACTCCACGTAAGCGA +
Preference number: 2 (lower is better)
Translates to: EARRSGRGLGTGPPRRTRNGCCW*CTPRKR
Trigger: TCGCTTACGTGGAGTACATCACCAGCAGCATCCATT...GCGAGTTCTCCGAGGAGGCCCAGTTCCGAGACCCCTGCCGCTCCTACGTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CGAGGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGAAATGGATGCTGCTGGTaGTGTACTCCACGTAAGCGA +
Preference number: 2 (lower is better)
Translates to: RGAAGPAAATSSCGTGARNGCCW*CTPRKR
Trigger: TCGCTTACGTGGAGTACATCACCAGCAGCATCCATT...TCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp GATCCCGAAGAGCGCTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGCCCTCTTCACCCACCTaGGGCAGTCCATGTGGATGC +
Preference number: 2 (lower is better)
Translates to: DPEERFVGLCVVVQVDMAPSSPT*GSPCGC
Trigger: GCATCCACATGGACTGCCTCAGGTGGGTGAAGAGGG...CGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAGCGCTCTTCGGGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCGGGCTTGCGGGAGATaGTGTAGCGGCAACTCAGCC +
Preference number: 2 (lower is better)
Translates to: VQEATEAWKSIHCVRNGARACGR*CSGNSA
Trigger: GGCTGAGTTGCCGCTACATCATCTCCCGCAAGCCCG...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp GATCATGCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTTTGACGGCCAGGTTCTaGAGGTCCAGCTCCACACAC +
Preference number: 2 (lower is better)
Translates to: DHAPGSMALPVQDPIVDLLTARF*RSSSTH
Trigger: GTGTGTGGAGCTGGACCTTCAGAACCTGGCCGTCAA...AAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCATGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCGGATCACGTCGAAGCTaGTCCCCATGCTGTCGGCCC +
Preference number: 2 (lower is better)
Translates to: VQEATEAWKSIHCVRNGAGSRRS*SPCCRP
Trigger: GGGCCGACAGCATGGGGATCAGCTTCGACGTGATCC...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAAACTCAGCGATGAGCTaGAGGAAGAGCTTCTTCATC +
Preference number: 2 (lower is better)
Translates to: PPHGGAPWSTAPQPVLHANSAMS*RKSFFI
Trigger: GATGAAGAAGCTCTTCCTGCAGCTCATCGCTGAGTT...TGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp GCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGGTTCTGGCAGGAGGCTaGCTGTGGCAAAAACTGCAA +
Preference number: 2 (lower is better)
Translates to: AQLQYTGMLVSFTPRHFRVLAGG*LWQKLQ
Trigger: TTGCAGTTTTTGCCACAGGCAGCCTCCTGCCAGAAC...CCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp GTACAGCACGTCCAGCCAGTAGTCAGCCACCTTGGCTACAGAGCCATACACCTCCAGACCGTGGACTGCTaGCCGGGCCTCCACAAATGG +
Preference number: 2 (lower is better)
Translates to: VQHVQPVVSHLGYRAIHLQTVDC*PGLHKW
Trigger: CCATTTGTGGAGGCCCGGGCAGCAGTCCACGGTCTG...GAGGTGTATGGCTCTGTAGCCAAGGTGGCTGACTACTGGCTGGACGTGCTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCTGATGCAGTGCAAGTCACTGCCAACGAGCGCCCACAGCCTGAACAGGCCGGCAAGCCTATCTCCTGCTaGATGCTCAGACCGTGGACT +
Preference number: 2 (lower is better)
Translates to: PDAVQVTANERPQPEQAGKPISC*MLRPWT
Trigger: AGTCCACGGTCTGAGCATGCAGCAGGAGATAGGCTT...GCCGGCCTGTTCAGGCTGTGGGCGCTCGTTGGCAGTGACTTGCACTGCATCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp CGCAGCACCTCGTCGGGCTCCATGGGAATAATGGTGCACAGAGCAAAGATGAATGCCAGAGTCTGGGGCTaGTCCGTGGCCATCCGGCAC +
Preference number: 2 (lower is better)
Translates to: RSTSSGSMGIMVHRAKMNARVWG*SVAIRH
Trigger: GTGCCGGATGGCCACGGAGCAGCCCCAGACTCTGGC...ATTCATCTTTGCTCTGTGCACCATTATTCCCATGGAGCCCGACGAGGTGCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp GCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACCTTCCGCTGGCAGTTTaGTCCAGGCTTATTGAAGTC +
Preference number: 2 (lower is better)
Translates to: APWSTAPQPVLHAVVHGHLPLAV*SRLIEV
Trigger: GACTTCAATAAGCCTGGAGCAAACTGCCAGCGGAAG...GTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp CAGCTGCAGTTCCCCGCGGCGTTTGACCTCAAAGCCCTTGAGCTCAGCCAGAGAGCATGTTGGCTGCCTTaGTGTACAGCACGTCCAGCC +
Preference number: 2 (lower is better)
Translates to: QLQFPAAFDLKALELSQRACWLP*CTARPA
Trigger: GGCTGGACGTGCTGTACAGCAAGGCAGCCAACATGC...TCTCTGGCTGAGCTCAAGGGCTTTGAGGTCAAACGCCGCGGGGAACTGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCACCAGCGTCATCTCGATGGCAGAGGAGTCGTAGGGCGCCTGACAGTTGGAGCCCTCACCGTGGGCTCTaGTTGGAAAATGGCAAGTGG +
Preference number: 2 (lower is better)
Translates to: PPASSRWQRSRRAPDSWSPHRGL*LENGKW
Trigger: CCACTTGCCATTTTCCAAGCAGAGCCCACGGTGAGG...GCTCCAACTGTCAGGCGCCCTACGACTCCTCTGCCATCGAGATGACGCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTGGGTGGTCAGTGGTCTaGTCACTGGAAGCACGGGGA +
Preference number: 2 (lower is better)
Translates to: ATEAWKSIHCVRNGAQGTGWSVV*SLEARG
Trigger: TCCCCGTGCTTCCAGTGACCAGACCACTGACCACCC...AGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp ACTCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTCCCCGTTCCCTGGCCTaGGGTCACAGGTTTGGACAG +
Preference number: 2 (lower is better)
Translates to: TRRHPPGEAGLGSAYSPGPRSLA*GHRFGQ
Trigger: CTGTCCAAACCTGTGACCCCAGGCCAGGGAACGGGG...ACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp ACACAGGTCCAGGTCGCGGCAGAAGTTACAGCTGCGGCAGATGACCTCAGGAAGTTCCTCCCCGTTCCCTaGCCTGGGGTCACAGGTTTG +
Preference number: 2 (lower is better)
Translates to: TQVQVAAEVTAAADDLRKFLPVP*PGVTGL
Trigger: CAAACCTGTGACCCCAGGCCAGGGAACGGGGAGGAA...CTTCCTGAGGTCATCTGCCGCAGCTGTAACTTCTGCCGCGACCTGGACCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp TCTCTGACTCCAGCTGGTGCTGGATCCGATGGTATTCGCTGCGACTGGCTGGCACTTCTTCAGGTGCTCTaGCGAGGCCAGGGCCACATC +
Preference number: 2 (lower is better)
Translates to: SLTPAGAGSDGIRCDWLALLQVL*RGQGHI
Trigger: GATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAG...TGCCAGCCAGTCGCAGCGAATACCATCGGATCCAGCACCAGCTGGAGTCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp AACCCCAGACTCGAGGGCCTCCACGTGGCCCCCGACGTAGGTCTCAGAGTCCAGGAAGCAACAGAGGCCTaGAAAAGCATTCACTGCGTG +
Preference number: 2 (lower is better)
Translates to: NPRLEGLHVAPDVGLRVQEATEA*KSIHCV
Trigger: CACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTC...CTGGACTCTGAGACCTACGTCGGGGGCCACGTGGAGGCCCTCGAGTCTGGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp TGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCAGCCCCACCCCACCAGGTGTaGTGCAGGAAGCAACAGAGG +
Preference number: 2 (lower is better)
Translates to: CEAVGPAHFSMQTGETPAPPHQV*CRKQQR
Trigger: CCTCTGTTGCTTCCTGCACCACACCTGGTGGGGTGG...GGCTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGAAGGTCTCCTTTGAATaGATGCTGCTGGTGATGTAC +
Preference number: 2 (lower is better)
Translates to: HGDVALASGGLARTQRHPKVSFE*MLLVMY
Trigger: GTACATCACCAGCAGCATCCATTCAAAGGAGACCTT...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCTCCACGTTGGATTCCTCCGCCTCTTCCTCCTCCTCCCCATCTCTTTCCTCCTCCAGCGTCATCTCGATaGCAGAGGAGTCGTAGGGCG +
Preference number: 2 (lower is better)
Translates to: PPRWIPPPLPPPPHLFPPPASSR*QRSRRA
Trigger: CGCCCTACGACTCCTCTGCCATCGAGATGACGCTGG...AGGAGGAAAGAGATGGGGAGGAGGAGGAAGAGGCGGAGGAATCCAACGTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GGCACTGGCAGCCTGACCACCCGTGATCATGTCCTCCAGGGAGGCCTGCTGGATATGAAGACCTGGGTGTaGATGGTGAGGGCGAAGTCT +
Preference number: 2 (lower is better)
Translates to: GTGSLTTRDHVLQGGLLDMKTWV*MVRAKS
Trigger: AGACTTCGCCCTCACCATCCACACCCAGGTCTTCAT...ATCCAGCAGGCCTCCCTGGAGGACATGATCACGGGTGGTCAGGCTGCCAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp ATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCCTCCAGATGAAGACCTGGGTGTaGATGGTGAGGGCGAAGTCT +
Preference number: 2 (lower is better)
Translates to: IVAGRGTGSLTTRDHVLQMKTWV*MVRAKS
Trigger: AGACTTCGCCCTCACCATCCACACCCAGGTCTTCAT...CTGGAGGACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp ACTCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTACGTGGCCAGAGTCTaGGGCTGCTCCGTGGCCATC +
Preference number: 2 (lower is better)
Translates to: TRRHPPGEAGLGSAYSPGYVARV*GCSVAI
Trigger: GATGGCCACGGAGCAGCCCCAGACTCTGGCCACGTA...ACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp CACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGTACGCTGCAGGCCATCTTCCGCTaGCAGTTTGCTCCAGGCTTA +
Preference number: 2 (lower is better)
Translates to: HCASARPSCSGTRPRCTLQAIFR*QFAPGL
Trigger: TAAGCCTGGAGCAAACTGCCAGCGGAAGATGGCCTG...CAGCGTACATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CAA 90 bp CTCCACTGCCAGGCCATCTTCCGCTGGCAGTTTGCTCCAGGCTTATaGAAGTCACAGGCAGCACAGGTGGCTTCGTCCACCATGGCAGAG +
Preference number: 2 (lower is better)
Translates to: LHCQAIFRWQFAPGL*KSQAAQVASSTMAE
Trigger: CTCTGCCATGGTGGACGAAGCCACCTGTGCTGCCTGTGACTTCAATAAGCCTGGAGCAAACTGCCAGCGGAAGATGGCCTGGCAGTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp CCACCAGCGTCATCTCGATGGCAGAGGAGTCGTAGGGCGCCTGACAGTTGGAGCGCAGTGAGCCAAAAGTaGGGTGCACAGAGGTCTTGT +
Preference number: 2 (lower is better)
Translates to: PPASSRWQRSRRAPDSWSAVSQK*GAQRSC
Trigger: ACAAGACCTCTGTGCACCTCACTTTTGGCTCACTGC...GCTCCAACTGTCAGGCGCCCTACGACTCCTCTGCCATCGAGATGACGCTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp TCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTCTGACACCTAAGTGCTaGTGCCTCACACATCATACT +
Preference number: 2 (lower is better)
Translates to: SSRGCSLEHCASARPSCSLTPKC*CLTHHT
Trigger: AGTATGATGTGTGAGGCATCAGCACTTAGGTGTCAG...ACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR-3UTR TCA 90 bp CTGCTGGATCACGTCGAAGCTGATCCCCATGCTGTCGGCCCCCTCCATGTCGTTTGTTGTGGTACTGGGTaGTCTCCTTCACCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: LLDHVEADPHAVGPLHVVCCGTG*SPSPSP
Trigger: TGGGCTGGGTGAAGGAGATCACCCAGTACCACAACA...AACGACATGGAGGGGGCCGACAGCATGGGGATCAGCTTCGACGTGATCCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp GTCTCCCGCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCAATGGAAGGTCTCCTTTaGATGGATGCTGCTGGTGAT +
Preference number: 2 (lower is better)
Translates to: VSRAAAVHRHAGLLHPAAMEGLL*MDAAGD
Trigger: ATCACCAGCAGCATCCATTCAAAGGAGACCTTCCAT...TGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp GCAGAGAGGATGGCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGTACAGCTGCGGCAGATaGCCTCAGGAAGCACGTAGG +
Preference number: 2 (lower is better)
Translates to: AERMATEASGRSASPGCLYSCGR*PQEARR
Trigger: CCTACGTGCTTCCTGAGGTCATCTGCCGCAGCTGTA...CAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGCCATCCTCTCTGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CCACCAGCGTCATCTCGATGGCAGAGGAGTCGTAGGGCGCCTGACAGTTGGAGCTTGCTCCAGGCTTATTaGAGTCACAGGCAGCACAGG +
Preference number: 2 (lower is better)
Translates to: PPASSRWQRSRRAPDSWSLLQAY*SHRQHR
Trigger: CCTGTGCTGCCTGTGACTTCAATAAGCCTGGAGCAA...GCTCCAACTGTCAGGCGCCCTACGACTCCTCTGCCATCGAGATGACGCTGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp CGGTTCTCAGAGATGAGCTCGAATAGCTCAGAGTCAGGCATGTTGGCTGCCTTGTGCGACTGGCTGGCATaGACTCGCCCCTCCACTGCC +
Preference number: 2 (lower is better)
Translates to: RFSEMSSNSSESGMLAALCDWLA*TRPSTA
Trigger: GGCAGTGGAGGGGCGAGTTCATGCCAGCCAGTCGCA...CAAGGCAGCCAACATGCCTGACTCTGAGCTATTCGAGCTCATCTCTGAGAACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp GCAGAGAGGATGGCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGTCAGCCCTGCATCCTTaGCCATCTGGTCTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: AERMATEASGRSASPGCLSALHP*PSGLPG
Trigger: TCCTGGGAGACCAGATGGTCAAGGATGCAGGGCTGA...CAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGCCATCCTCTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp CTCCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCTACATGTTCCTTGCTaGGTAACACACAGAAGACTC +
Preference number: 2 (lower is better)
Translates to: LLLTGVLPGALRLSPSFMLHVPC*VTHRRL
Trigger: GAGTCTTCTGTGTGTTACTCAGCAAGGAACATGTAG...CATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp GCGATACGAAGCACCCTCCTCCGCTTTAGCGACTCGCTGGTTCACGTAGAACACGCTTCCTCTTCACAGTaGCAGGGGCTGCTGGGTGAG +
Preference number: 2 (lower is better)
Translates to: AIRSTLLRFSDSLVHVEHASSSQ*QGLLGE
Trigger: CTCACCCAGCAGCCCCTGTCACTGTGAAGAGGAAGC...GTGTTCTACGTGAACCAGCGAGTCGCTAAAGCGGAGGAGGGTGCTTCGTATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp GATCCCGAAGAGCGCTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGCTCGATGTCTGGCGCTaGCAGCTCAGCGTTGATCTC +
Preference number: 2 (lower is better)
Translates to: DPEERFVGLCVVVQVDMALDVWR*QLSVDL
Trigger: GAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAG...CGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAGCGCTCTTCGGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp GCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGAACAGTAACGGAACCTaGGTCTCATATACGCCCTCG +
Preference number: 2 (lower is better)
Translates to: AQLQYTGMLVSFTPRHFRNSNGT*VSYTPS
Trigger: CGAGGGCGTATATGAGACTCAGGTTCCGTTACTGTT...CCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp GATCATGCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTCCCCCTCCATGTCGTTaGCATGGTGAGACTGGAGAA +
Preference number: 2 (lower is better)
Translates to: DHAPGSMALPVQDPIVDLPPPCR*HGETGE
Trigger: TTCTCCAGTCTCACCATGTCAACGACATGGAGGGGG...AAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCATGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp GTACAGCACGTCCAGCCAGTAGTCAGCCACCTTGGCTACAGAGCCATACACCTCCCCCACCAGGTGTGGTaGAGGAAGCAACAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: VQHVQPVVSHLGYRAIHLPHQVW*RKQQRP
Trigger: AGGCCTCTGTTGCTTCCTGCACCACACCTGGTGGGG...GAGGTGTATGGCTCTGTAGCCAAGGTGGCTGACTACTGGCTGGACGTGCTGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp TGTCTCATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCTCGTCCTCATTTTCCTaGTCATCCTCTGCTCCCCCT +
Preference number: 2 (lower is better)
Translates to: CLIVAGRGTGSLTTRDHVSSSFS*SSSAPP
Trigger: AGGGGGAGCAGAGGATGAGCAGGAAAATGAGGACGA...GACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGATGAGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGTGTGCTCCCTGGAGCACTaGGCCTCAGCCCGTCCTTCA +
Preference number: 2 (lower is better)
Translates to: PTSTRRSRSRFSLFTWFVCSLEH*ASARPS
Trigger: TGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCA...CACAAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCAATGTTCCGGAATAAGGCAGACCAGGTCCTaGAGGGTGAAGGCCATCAGC +
Preference number: 2 (lower is better)
Translates to: PGSPGGTTCRSAGQCSGIRQTRS*RVKAIS
Trigger: GCTGATGGCCTTCACCCTGCAGGACCTGGTCTGCCT...TATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCTTGTAGGCGAGCAGGAATCGCTGGATGGCTCTGCAGATGGTCTTCAGGTCAGAGTCTCCCGCGCAGCTaGAGTACACAGGCATGCTGG +
Preference number: 2 (lower is better)
Translates to: PCRRAGIAGWLCRWSSGQSLPRS*STQACW
Trigger: CCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGACT...CTGACCTGAAGACCATCTGCAGAGCCATCCAGCGATTCCTGCTCGCCTACAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCAAGCCTATCTCCTGCTaGATGCTCAGACCGTGGACT +
Preference number: 2 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRKPISC*MLRPWT
Trigger: AGTCCACGGTCTGAGCATGCAGCAGGAGATAGGCTT...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp GCGATACGAAGCACCCTCCTCCGCTTTAGCGACTCGCTGGTTCACGTAGAACACAGGCCTCACACAGAGTaGCAGAGCCCTTCCGCAGCA +
Preference number: 2 (lower is better)
Translates to: AIRSTLLRFSDSLVHVEHRPHTE*QSPSAA
Trigger: TGCTGCGGAAGGGCTCTGGCACTCTGTGTGAGGCCT...GTGTTCTACGTGAACCAGCGAGTCGCTAAAGCGGAGGAGGGTGCTTCGTATCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp GATCATGCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGGCAAGGGATATCGCTaGGGAAAACCCCAGACTCGA +
Preference number: 2 (lower is better)
Translates to: DHAPGSMALPVQDPIVDLGKGYR*GKPQTR
Trigger: TCGAGTCTGGGGTTTTCCGCAGCGATATCCCTTGCC...AAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCATGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTTGGCATCAGGAGGCCTaGCACGGACGCAGAGGCACC +
Preference number: 2 (lower is better)
Translates to: RFSRVRVWIPGETSPQTAWHQEA*HGRRGT
Trigger: GGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCA...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp TTTCCTGAGGCTGATAGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCCCCCGTTCCCTGGCCTaGGGTCACAGGTTTGGACAG +
Preference number: 2 (lower is better)
Translates to: FPEADRGFPLDPAPNKQGPRSLA*GHRFGQ
Trigger: CTGTCCAAACCTGTGACCCCAGGCCAGGGAACGGGG...GCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCTATCAGCCTCAGGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp TGCAGGGTGAAGGCCATCAGCTTCTTCTGTAGAACTTCCACCAGCGTCATCTCGGCCCCACCAGGGCCTTaGGAACCCGTCTCGTCTCAG +
Preference number: 2 (lower is better)
Translates to: CRVKAISFFCRTSTSVISAPPGP*EPVSSQ
Trigger: CTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGGC...CGAGATGACGCTGGTGGAAGTTCTACAGAAGAAGCTGATGGCCTTCACCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp AGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCAGACCAGGTCCTGCAGTGTGAGGCTCTCGTCTaGGGTGTCTGCATTTCTGAT +
Preference number: 2 (lower is better)
Translates to: RHAGLLHPAALQADQVLQCEALV*GVCISD
Trigger: ATCAGAAATGCAGACACCCCAGACGAGAGCCTCACA...CTGCAGGACCTGGTCTGCCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CAGACGATGCCAGCCATCTCCATGGAGTACCAGCGAGCCCCCTTGCGCATGACACCGTCCTTCATGCAGTaGTACACGGCCACGATGTAC +
Preference number: 2 (lower is better)
Translates to: QTMPAISMEYQRAPLRMTPSFMQ*YTATMY
Trigger: GTACATCGTGGCCGTGTACCACTGCATGAAGGACGG...TGTCATGCGCAAGGGGGCTCGCTGGTACTCCATGGAGATGGCTGGCATCGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCTGATGGACGTAGACTTCTGCTCCCCGTAATCTTCCAGCTTCCGAGACATGGATGCATGCTCAGACCGTaGACTGCTGCCCGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: ADGRRLLLPVIFQLPRHGCMLRP*TAARAS
Trigger: GGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCA...TCCATGTCTCGGAAGCTGGAAGATTACGGGGAGCAGAAGTCTACGTCCATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCCACACAGATAGGCACTCCATGTGGATGCACTaGGGCGCCTTGTACTCCCCC +
Preference number: 2 (lower is better)
Translates to: ALPVQDPIVDLVSHTDRHSMWMH*GALYSP
Trigger: GGGGGAGTACAAGGCGCCCCAGTGCATCCACATGGA...GTGCCTATCTGTGTGGCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCCATAGAAGGAGTTCAGGATGCACTTGTGGGCCAGCTGCAGCGAGTCATACAGTCTGGGGCTGCTCCGTaGCCATCCGGCACATGTCCT +
Preference number: 2 (lower is better)
Translates to: AIEGVQDALVGQLQRVIQSGAAP*PSGTCP
Trigger: AGGACATGTGCCGGATGGCCACGGAGCAGCCCCAGA...CTGTATGACTCGCTGCAGCTGGCCCACAAGTGCATCCTGAACTCCTTCTATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCAAAGATGAATGGGTaGACGTACTTCATGTACAGG +
Preference number: 2 (lower is better)
Translates to: ALAASLTACFFRCSGEARAKMNG*TYFMYR
Trigger: CCTGTACATGAAGTACGTCCACCCATTCATCTTTGC...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp CAGCTGCAGTTCCCCGCGGCGTTTGACCTCAAAGCCCTTGAGCTCAGCCAGAGAAAGGAGTTTTCCCGCTaGCAGATGGTGGTGAGACGC +
Preference number: 2 (lower is better)
Translates to: QLQFPAAFDLKALELSQRKEFSR*QMVVRR
Trigger: GCGTCTCACCACCATCTGCCAGCGGGAAAACTCCTT...TCTCTGGCTGAGCTCAAGGGCTTTGAGGTCAAACGCCGCGGGGAACTGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GATCATGCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGCCAGCTCCTGGTACTaGTCATTGGTGAAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: DHAPGSMALPVQDPIVDLASSWY*SLVKPS
Trigger: GGAAGGCTTCACCAATGACCAGTACCAGGAGCTGGC...AAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCATGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp AGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCAGACCAGGTCCTGCAGAGGCTGGAAGAATCATaGCAAGGTAGGGCCCATCAA +
Preference number: 2 (lower is better)
Translates to: RHAGLLHPAALQADQVLQRLEES*QGRAHQ
Trigger: TTGATGGGCCCTACCTTGCCATGATTCTTCCAGCCT...CTGCAGGACCTGGTCTGCCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCTTGGAAAATGGCAAGTaGGATGGCCACTATGATCCA +
Preference number: 2 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGLENGK*DGHYDP
Trigger: TGGATCATAGTGGCCATCCCACTTGCCATTTTCCAA...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672002.1
3UTR CAA 90 bp AAGGTCTCTGCTTCCCAGCCTGAAAGGTGCCTCACCAGCTGTTTATaGACCACACACACACAGCCCAGGTGCACCAGGGCCCGGAACAGT +
Preference number: 2 (lower is better)
Translates to: KVSASQPERCLTSCL*TTHTQPRCTRARNS
Trigger: ACTGTTCCGGGCCCTGGTGCACCTGGGCTGTGTGTGTGTGGTCAATAAACAGCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAGACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACCACAAACTGCTCCTGTaGGGCTGTGGGGCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNHKLLL*GCGASP
Trigger: TGGGCTGGCCCCACAGCCTCACAGGAGCAGTTTGTG...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp GTAGAACACACGGGGGATGCTCAGCCTGATGCAGTGCAAGTCACTGCCAACGAGGGACAAGGGCTGCAGTaGGCCAAAAGTGAGGTGCAC +
Preference number: 2 (lower is better)
Translates to: VEHTGDAQPDAVQVTANEGQGLQ*AKSEVH
Trigger: GTGCACCTCACTTTTGGCTCACTGCAGCCCTTGTCC...CTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAGCATCCCCCGTGTGTTCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp TCTCTGACTCCAGCTGGTGCTGGATCCGATGGTATTCGCTGCGACTGGCTGGCATGTTGTGGTACTGGGTaGTCTCCTTCACCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: SLTPAGAGSDGIRCDWLACCGTG*SPSPSP
Trigger: TGGGCTGGGTGAAGGAGATCACCCAGTACCACAACA...TGCCAGCCAGTCGCAGCGAATACCATCGGATCCAGCACCAGCTGGAGTCAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp CCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGTGTTCCTGGCCAGGTCCTGCAGGGTaGAGGCCATCAGCTTCTTCT +
Preference number: 2 (lower is better)
Translates to: PSMSGADSSALISLMCSWPGPAG*RPSASS
Trigger: AGAAGAAGCTGATGGCCTTCACCCTGCAGGACCTGG...CCAGGAACACATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGTCACATTGGTCGTCTTaGAGACAAAATTTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: HGDVALASGGLARTQRHPSHWSS*RQNFLG
Trigger: TCCCAGAAAATTTTGTCTTCAAGACGACCAATGTGA...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp ACTCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTCAGCCCTGCATCCTTaGCCATCTGGTCTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: TRRHPPGEAGLGSAYSPGSALHP*PSGLPG
Trigger: TCCTGGGAGACCAGATGGTCAAGGATGCAGGGCTGA...ACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCGCCTCGCTCACGGCCTaGTTCTTCAGGTGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKIASLTA*FFRCSG
Trigger: GCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGC...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp GCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGCATAGATGTTGTGCCTCGCTCACGGCCTaGTTCTTCAGGTGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: ATEASGRSASPGCLHRCCASLTA*FFRCSG
Trigger: GCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGC...ACAACATCTATGCAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp CTGCTGGATCACGTCGAAGCTGATCCCCATGCTGTCGGCCCCCTCCATGTCGTTTCGTCCTCATTTTCCTaGTCATCCTCTGCTCCCCCT +
Preference number: 2 (lower is better)
Translates to: LLDHVEADPHAVGPLHVVSSSFS*SSSAPP
Trigger: AGGGGGAGCAGAGGATGAGCAGGAAAATGAGGACGA...AACGACATGGAGGGGGCCGACAGCATGGGGATCAGCTTCGACGTGATCCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp GTACAGCACGTCCAGCCAGTAGTCAGCCACCTTGGCTACAGAGCCATACACCTCTCAGCCCGTCCTTCATaGAGTGGTACACGGCCACGA +
Preference number: 2 (lower is better)
Translates to: VQHVQPVVSHLGYRAIHLSARPS*SGTRPR
Trigger: TCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGA...GAGGTGTATGGCTCTGTAGCCAAGGTGGCTGACTACTGGCTGGACGTGCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp GCCATAGAAGGAGTTCAGGATGCACTTGTGGGCCAGCTGCAGCGAGTCATACAGAGGCAGACCAGGTCCTaGAGGGTGAAGGCCATCAGC +
Preference number: 2 (lower is better)
Translates to: AIEGVQDALVGQLQRVIQRQTRS*RVKAIS
Trigger: GCTGATGGCCTTCACCCTGCAGGACCTGGTCTGCCT...CTGTATGACTCGCTGCAGCTGGCCCACAAGTGCATCCTGAACTCCTTCTATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp CACTGGGTTCTTTACCTGCTGCAGGGCCGCAGGGATGGTGATGATCTTCTGGATAGTCTCCCGCGCAGCTaGAGTACACAGGCATGCTGG +
Preference number: 2 (lower is better)
Translates to: HWVLYLLQGRRDGDDLLDSLPRS*STQACW
Trigger: CCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGACT...ATCCAGAAGATCATCACCATCCCTGCGGCCCTGCAGCAGGTAAAGAACCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp GCTCCAGGCTTATTGAAGTCACAGGCAGCACAGGTGGCTTCGTCCACCATGGCAGGCAGTCCATGTGGATaGACTGGGGCGCCTTGTACT +
Preference number: 2 (lower is better)
Translates to: APGLLKSQAAQVASSTMAGSPCG*TGAPCT
Trigger: AGTACAAGGCGCCCCAGTGCATCCACATGGACTGCC...TGCCATGGTGGACGAAGCCACCTGTGCTGCCTGTGACTTCAATAAGCCTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGTGTTCCTGGTTGGCGTGGAAGGCCTaGACCATCAGCAAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: PSMSGADSSALISLMCSWLAWKA*TISKAS
Trigger: TGAGGCCTTGCTGATGGTGCAGGCCTTCCACGCCAA...CCAGGAACACATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp GCGATACGAAGCACCCTCCTCCGCTTTAGCGACTCGCTGGTTCACGTAGAACACTTGGCGTGGAAGGCCTaGACCATCAGCAAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: AIRSTLLRFSDSLVHVEHLAWKA*TISKAS
Trigger: TGAGGCCTTGCTGATGGTGCAGGCCTTCCACGCCAA...GTGTTCTACGTGAACCAGCGAGTCGCTAAAGCGGAGGAGGGTGCTTCGTATCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp GGCCTGCACCATCAGCAAGGCCTCACACAGAGTGCCAGAGCCCTTCCGCAGCACTCAAAGTTGGTGACTTaGTCCACAGGCACTTTCTCC +
Preference number: 2 (lower is better)
Translates to: GLHHQQGLTQSARALPQHSKLVT*STGTFS
Trigger: GGAGAAAGTGCCTGTGGAGCAAGTCACCAACTTTGA...GTGCTGCGGAAGGGCTCTGGCACTCTGTGTGAGGCCTTGCTGATGGTGCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp AGGCTTTCCGGCAGTAATCCGCCAGCCTTCTCTTCTCGTATTTCGCCTGTTCCTAACTCGCCCCTCCACTaGCAGGCCATCTTCCGCTGG +
Preference number: 2 (lower is better)
Translates to: RLSGSNPPAFSSRISPVPNSPLH*QAIFRW
Trigger: CCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGTT...AGGAACAGGCGAAATACGAGAAGAGAAGGCTGGCGGATTACTGCCGGAAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp AGGTGCTCAAGAGCAAAGGTCTCTGCTTCCCAGCCTGAAAGGTGCCTCACCAGCCTCGGCCAGGCGCTTTaGTGTGCTGATGGACGTAGA +
Preference number: 2 (lower is better)
Translates to: RCSRAKVSASQPERCLTSLGQAL*CADGRR
Trigger: TCTACGTCCATCAGCACAGCAAAGCGCCTGGCCGAG...GCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAGACCTTTGCTCTTGAGCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGTGTTCCTGGCTCGGCCAGGCGCTTTaGTGTGCTGATGGACGTAGA +
Preference number: 2 (lower is better)
Translates to: PSMSGADSSALISLMCSWLGQAL*CADGRR
Trigger: TCTACGTCCATCAGCACAGCAAAGCGCCTGGCCGAG...CCAGGAACACATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCACCAGCGTCATCTCGATGGCAGAGGAGTCGTAGGGCGCCTGACAGTTGGAGCGAATGTGAAAGTACCTaGTCATCTCGAAGGCCTGCG +
Preference number: 2 (lower is better)
Translates to: PPASSRWQRSRRAPDSWSECEST*SSRRPA
Trigger: CGCAGGCCTTCGAGATGAGCAGGTACTTTCACATTC...GCTCCAACTGTCAGGCGCCCTACGACTCCTCTGCCATCGAGATGACGCTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCAAACTCGCCACACAGTaGTCTCTGGCTCTGCCATTA +
Preference number: 2 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLKLATQ*SLALPL
Trigger: TAATGGCAGAGCCAGAGACCACTGTGTGGCGAGTTT...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR-3UTR CCA 90 bp CCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGCCTGTGATGTACCTTTaGTCACATCGAAAAGTGGCC +
Preference number: 2 (lower is better)
Translates to: PGALRLSPSFMQWYTATMPVMYL*SHRKVA
Trigger: GGCCACTTTTCGATGTGACCAAAGGTACATCACAGG...CATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR-3UTR CCA 90 bp CTCCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGTCCGCCATAGTTAGATaGATCCATCCAGAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: LLLTGVLPGALRLSPSFMSAIVR*IHPEKK
Trigger: TTTCTTCTCTGGATGGATCCATCTAACTATGGCGGA...CATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp TGTCTCATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCGTAAATCCTCCACGTTaGATTCCTCCGCCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: CLIVAGRGTGSLTTRDHVVNPPR*IPPPLP
Trigger: AGGAAGAGGCGGAGGAATCCAACGTGGAGGATTTAC...GACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGATGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGTGAGTACACAGGCATGCTaGTCTCCTTCACCCCGCGGC +
Preference number: 2 (lower is better)
Translates to: PTSTRRSRSRFSLFTWFVSTQAC*SPSPRG
Trigger: GCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACT...CACAAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp AGGTGCTCAAGAGCAAAGGTCTCTGCTTCCCAGCCTGAAAGGTGCCTCACCAGCCCCTGGCTGTCCTTCTaGAAGCCTATCTCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: RCSRAKVSASQPERCLTSPWLSF*KPISCC
Trigger: GCAGCAGGAGATAGGCTTCCAGAAGGACAGCCAGGG...GCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAGACCTTTGCTCTTGAGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GATCCCGAAGAGCGCTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGCTGACACAGAATACGTaGCCAGAGTCTGGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: DPEERFVGLCVVVQVDMALTQNT*PESGAA
Trigger: AGCAGCCCCAGACTCTGGCCACGTATTCTGTGTCAG...CGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAGCGCTCTTCGGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GATCCCGAAGAGCGCTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGTTCAGGATGCACTTGTaGGCCAGCTGCAGCGAGTCA +
Preference number: 2 (lower is better)
Translates to: DPEERFVGLCVVVQVDMAFRMHL*ASCSES
Trigger: TGACTCGCTGCAGCTGGCCCACAAGTGCATCCTGAA...CGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAGCGCTCTTCGGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp AGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCAGACCAGGTCCTGCAGCTGGTAGGTTCCCAATaGGAATGTGAAAGTACCTGC +
Preference number: 2 (lower is better)
Translates to: RHAGLLHPAALQADQVLQLVGSQ*ECESTC
Trigger: GCAGGTACTTTCACATTCCCATTGGGAACCTACCAG...CTGCAGGACCTGGTCTGCCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CAA 90 bp CTCTTCCAGCGTGCTGCCCTTGAGGAAGGCCTCAAACACCGAGGATaGGAAGATCTTAATCAGCTGCAGTTCCCCGCGGCGTTTGACCTC +
Preference number: 2 (lower is better)
Translates to: LFQRAALEEGLKHRG*EDLNQLQFPAAFDL
Trigger: GAGGTCAAACGCCGCGGGGAACTGCAGCTGATTAAGATCTTCCAATCCTCGGTGTTTGAGGCCTTCCTCAAGGGCAGCACGCTGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCTCCCGCTCCCTCCTGTaGCGTCTGAGCTCCCTGAAA +
Preference number: 2 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKISRSLL*RLSSLK
Trigger: TTTCAGGGAGCTCAGACGTCACAGGAGGGAGCGGGA...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp GCGATGGCCTCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAGCAGTGAGCCAAAAGTaGGGTGCACAGAGGTCTTGT +
Preference number: 2 (lower is better)
Translates to: AMASDSRWQGQTKAGSGPAVSQK*GAQRSC
Trigger: ACAAGACCTCTGTGCACCTCACTTTTGGCTCACTGC...TGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGCCATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp GAAGCACGTAGGAGCGGCAGGGGTCTCGGAACTGGGCCTCCTCGGAGAACTCGCTTGTTTGGTGCCCTGTaGAATTGGCCTTTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: EARRSGRGLGTGPPRRTRLFGAL*NWPFFF
Trigger: AAAGAAGAAAGGCCAATTTCACAGGGCACCAAACAA...GCGAGTTCTCCGAGGAGGCCCAGTTCCGAGACCCCTGCCGCTCCTACGTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGGGTGTCTGCATTTCTaGTTTACATTTCATACTTGT +
Preference number: 2 (lower is better)
Translates to: HGDVALASGGLARTQRHPGCLHF*FTFHTC
Trigger: ACAAGTATGAAATGTAAATCAGAAATGCAGACACCC...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCACAAATGGCCAGTCAAACCTCATCGGGTTCATTaGAGACACAAAAGGGGCCTT +
Preference number: 2 (lower is better)
Translates to: LHAQTVDCCPGLHKWPVKPHRVH*RHKRGL
Trigger: AAGGCCCCTTTTGTGTCTTCAATGAACCCGATGAGG...TTTGACTGGCCATTTGTGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp CGGTTCTCAGAGATGAGCTCGAATAGCTCAGAGTCAGGCATGTTGGCTGCCTTGGGCGGTTGGTCAGGATaGTGTTGGGGTACATGGCCC +
Preference number: 2 (lower is better)
Translates to: RFSEMSSNSSESGMLAALGGWSG*CWGTWP
Trigger: GGGCCATGTACCCCAACATCATCCTGACCAACCGCC...CAAGGCAGCCAACATGCCTGACTCTGAGCTATTCGAGCTCATCTCTGAGAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp CTGCTGGATCACGTCGAAGCTGATCCCCATGCTGTCGGCCCCCTCCATGTCGTTGCTCTTCCACCTTGGTaGTGTGGATCTTCTTGTAGG +
Preference number: 2 (lower is better)
Translates to: LLDHVEADPHAVGPLHVVALPPW*CGSSCR
Trigger: CCTACAAGAAGATCCACATCACCAAGGTGGAAGAGC...AACGACATGGAGGGGGCCGACAGCATGGGGATCAGCTTCGACGTGATCCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp CCTCCACGTTGGATTCCTCCGCCTCTTCCTCCTCCTCCCCATCTCTTTCCTCCTAAAGATGCTGTTCTCTaGGCGGGTGACGTAGGTGAG +
Preference number: 2 (lower is better)
Translates to: PPRWIPPPLPPPPHLFPPKDAVL*AGDVGE
Trigger: CTCACCTACGTCACCCGCTCAGAGAACAGCATCTTT...AGGAGGAAAGAGATGGGGAGGAGGAGGAAGAGGCGGAGGAATCCAACGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp CCAGGTGCACCAGGGCCCGGAACAGTAACGGAACCTGAGTCTCATATACGCCCTGGTCATCTCGGCGGGTaGTTTCTACCGGAAAAGCAT +
Preference number: 2 (lower is better)
Translates to: PGAPGPGTVTEPESHIRPGHLGG*FLPEKH
Trigger: ATGCTTTTCCGGTAGAAATCACCCGCCGAGATGACC...AGGGCGTATATGAGACTCAGGTTCCGTTACTGTTCCGGGCCCTGGTGCACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672742.1
3UTR-3UTR GCA 90 bp CTGCAGCAGCCACTCCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCCATCACCTGGTTGTCTaGATAGATGTTGTGGTACTG +
Preference number: 2 (lower is better)
Translates to: LQQPLQGLQEVRHAVVLGHHLVV*IDVVVL
Trigger: CAGTACCACAACATCTATGCAGACAACCAGGTGATG...GCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGGAGTGGCTGCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp GCGATACGAAGCACCCTCCTCCGCTTTAGCGACTCGCTGGTTCACGTAGAACACATCCTCTGCTCCCCCTaGTTTCTGGGAGTCTTGCAG +
Preference number: 2 (lower is better)
Translates to: AIRSTLLRFSDSLVHVEHILCSP*FLGVLQ
Trigger: CTGCAAGACTCCCAGAAAGCAGGGGGAGCAGAGGAT...GTGTTCTACGTGAACCAGCGAGTCGCTAAAGCGGAGGAGGGTGCTTCGTATCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp GCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCCACACAGATAGGCACTTCCTGCTCATCCTCTaGTCCCCCTGCTTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: ALPVQDPIVDLVSHTDRHFLLIL*SPCFLG
Trigger: TCCCAGAAAGCAGGGGGAGCAGAGGATGAGCAGGAA...GTGCCTATCTGTGTGGCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp AGGTGCTCAAGAGCAAAGGTCTCTGCTTCCCAGCCTGAAAGGTGCCTCACCAGCTTCCTGCTCATCCTCTaGTCCCCCTGCTTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: RCSRAKVSASQPERCLTSFLLIL*SPCFLG
Trigger: TCCCAGAAAGCAGGGGGAGCAGAGGATGAGCAGGAA...GCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAGACCTTTGCTCTTGAGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCTCCACGTTGGATTCCTCCGCCTCTTCCTCCTCCTCCCCATCTCTTTCCTCCTGTTCTGGCAGGAGGCTaGCTGTGGCAAAAACTGCAA +
Preference number: 2 (lower is better)
Translates to: PPRWIPPPLPPPPHLFPPVLAGG*LWQKLQ
Trigger: TTGCAGTTTTTGCCACAGGCAGCCTCCTGCCAGAAC...AGGAGGAAAGAGATGGGGAGGAGGAGGAAGAGGCGGAGGAATCCAACGTGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp CGGTTCTCAGAGATGAGCTCGAATAGCTCAGAGTCAGGCATGTTGGCTGCCTTGAAGGGCCTCCCAATCTaGTCGATCAGCTCCCGTGCC +
Preference number: 2 (lower is better)
Translates to: RFSEMSSNSSESGMLAALKGLPI*SISSRA
Trigger: GGCACGGGAGCTGATCGAGCAGATTGGGAGGCCCTT...CAAGGCAGCCAACATGCCTGACTCTGAGCTATTCGAGCTCATCTCTGAGAACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp GCTCTGCTGAGTACAGGGCGCCAAGGCTGGGCATCTGGTTGCTGCGCACAGTGTATGTATGCACAAACATaGCTACAGGTTCCTCGGGGA +
Preference number: 2 (lower is better)
Translates to: ALLSTGRQGWASGCCAQCMYAQT*LQVPRG
Trigger: TCCCCGAGGAACCTGTAGGCATGTTTGTGCATACAT...ACACTGTGCGCAGCAACCAGATGCCCAGCCTTGGCGCCCTGTACTCAGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGTCCCAATCCAGAATTaGTCGAATATCAAAGTCTTG +
Preference number: 2 (lower is better)
Translates to: ALAASLTACFFRCSGEARVPIQN*SNIKVL
Trigger: CAAGACTTTGATATTCGAGCAATTCTGGATTGGGAC...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCAGTGGTCTGGTCACTaGAAGCACGGGGATGTGGCC +
Preference number: 2 (lower is better)
Translates to: RFSRVRVWIPGETSPQTAQWSGH*KHGDVA
Trigger: GGCCACATCCCCGTGCTTCCAGTGACCAGACCACTG...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp ATATACCATCTGTGTCCAGCTCTAAGGGCCTCCCAATCTGCTCGATCAGCTCCCCAGTGGTCTGGTCACTaGAAGCACGGGGATGTGGCC +
Preference number: 2 (lower is better)
Translates to: IYHLCPALRASQSARSAPQWSGH*KHGDVA
Trigger: GGCCACATCCCCGTGCTTCCAGTGACCAGACCACTG...GGGAGCTGATCGAGCAGATTGGGAGGCCCTTAGAGCTGGACACAGATGGTATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGAGGGTGGTCAGTGGTCTaGTCACTGGAAGCACGGGGA +
Preference number: 2 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRGWSVV*SLEARG
Trigger: TCCCCGTGCTTCCAGTGACCAGACCACTGACCACCC...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GTAGAACACACGGGGGATGCTCAGCCTGATGCAGTGCAAGTCACTGCCAACGAGAGTCAGGGTGGTCAGTaGTCTGGTCACTGGAAGCAC +
Preference number: 2 (lower is better)
Translates to: VEHTGDAQPDAVQVTANESQGGQ*SGHWKH
Trigger: GTGCTTCCAGTGACCAGACCACTGACCACCCTGACT...CTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAGCATCCCCCGTGTGTTCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp AGGTGCTCAAGAGCAAAGGTCTCTGCTTCCCAGCCTGAAAGGTGCCTCACCAGCAGTCAGGGTGGTCAGTaGTCTGGTCACTGGAAGCAC +
Preference number: 2 (lower is better)
Translates to: RCSRAKVSASQPERCLTSSQGGQ*SGHWKH
Trigger: GTGCTTCCAGTGACCAGACCACTGACCACCCTGACT...GCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAGACCTTTGCTCTTGAGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp ATGAACCACCGCTGGTGGGTAATGCGAGTAGCTGCCCTCAACCATGCTCTCCGCTTTGGACAGTCAGGGTaGTCAGTGGTCTGGTCACTG +
Preference number: 2 (lower is better)
Translates to: MNHRWWVMRVAALNHALRFGQSG*SVVWSL
Trigger: CAGTGACCAGACCACTGACCACCCTGACTGTCCAAA...GCGGAGAGCATGGTTGAGGGCAGCTACTCGCATTACCCACCAGCGGTGGTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR-3UTR CCA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACCTTCTTCAGGTGCTCTaGCGAGGCCAGGGCCACATC +
Preference number: 2 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNLLQVL*RGQGHI
Trigger: GATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAG...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGCATAGATGTTGTCTTCTTCAGGTGCTCTaGCGAGGCCAGGGCCACATC +
Preference number: 2 (lower is better)
Translates to: ATEASGRSASPGCLHRCCLLQVL*RGQGHI
Trigger: GATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAG...ACAACATCTATGCAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCGATGGCCTCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAGGCTTTTCCTCCCTCTaGGAGGCAGGACAAAGAACT +
Preference number: 2 (lower is better)
Translates to: AMASDSRWQGQTKAGSGPGFSSL*EAGQRT
Trigger: AGTTCTTTGTCCTGCCTCCCAGAGGGAGGAAAAGCC...TGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGCCATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCAGAGAGGATGGCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGCTTTCTGCTTCCAGCTaGTCCTGTGTGGAGGTGAAG +
Preference number: 2 (lower is better)
Translates to: AERMATEASGRSASPGCLLSASS*SCVEVK
Trigger: CTTCACCTCCACACAGGACCAGCTGGAAGCAGAAAG...CAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGCCATCCTCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCCATTTCATACTTGTTTaGTGCCCTGTGAAATTGGCC +
Preference number: 2 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGAHFILV*CPVKLA
Trigger: GGCCAATTTCACAGGGCACCAAACAAGTATGAAATG...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CTGCTGGATCACGTCGAAGCTGATCCCCATGCTGTCGGCCCCCTCCATGTCGTTGCCTCAGACAGTAGATaGCAGGGACAAACTAAGGCT +
Preference number: 2 (lower is better)
Translates to: LLDHVEADPHAVGPLHVVASDSR*QGQTKA
Trigger: AGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGC...AACGACATGGAGGGGGCCGACAGCATGGGGATCAGCTTCGACGTGATCCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCTCCACGTTGGATTCCTCCGCCTCTTCCTCCTCCTCCCCATCTCTTTCCTCCTTTATTGAGCAGCAAGTaGGAACCGGGGAGGACAGGA +
Preference number: 2 (lower is better)
Translates to: PPRWIPPPLPPPPHLFPPLLSSK*EPGRTG
Trigger: TCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAA...AGGAGGAAAGAGATGGGGAGGAGGAGGAAGAGGCGGAGGAATCCAACGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp TGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCAGCCTTATTGAGCAGCAAGTaGGAACCGGGGAGGACAGGA +
Preference number: 2 (lower is better)
Translates to: CEAVGPAHFSMQTGETPALLSSK*EPGRTG
Trigger: TCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAA...GGCTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GTACAGCACGTCCAGCCAGTAGTCAGCCACCTTGGCTACAGAGCCATACACCTCCTAATGGCCCAGCTGTaGGTTCTTCTGCAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: VQHVQPVVSHLGYRAIHLLMAQL*VLLQQP
Trigger: TGGCTGCTGCAGAAGAACCCACAGCTGGGCCATTAG...GAGGTGTATGGCTCTGTAGCCAAGGTGGCTGACTACTGGCTGGACGTGCTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp CAGCTGCAGTTCCCCGCGGCGTTTGACCTCAAAGCCCTTGAGCTCAGCCAGAGAGGGGCCTTCATATTCTaGCTTGGGGGTGAACTCAAA +
Preference number: 2 (lower is better)
Translates to: QLQFPAAFDLKALELSQRGAFIF*LGGELK
Trigger: TTTGAGTTCACCCCCAAGCCAGAATATGAAGGCCCC...TCTCTGGCTGAGCTCAAGGGCTTTGAGGTCAAACGCCGCGGGGAACTGCAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp CACGTCCAGCCAGTAGTCAGCCACCTTGGCTACAGAGCCATACACCTCTTCCAGTGGTGCTGGATCCGATaGTATTCGCTGCGACTGGCT +
Preference number: 2 (lower is better)
Translates to: HVQPVVSHLGYRAIHLFQWCWIR*YSLRLA
Trigger: AGCCAGTCGCAGCGAATACCATCGGATCCAGCACCA...CTGGAAGAGGTGTATGGCTCTGTAGCCAAGGTGGCTGACTACTGGCTGGACGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp ACTCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTGGTGCTGGATCCGATaGTATTCGCTGCGACTGGCT +
Preference number: 2 (lower is better)
Translates to: TRRHPPGEAGLGSAYSPGWCWIR*YSLRLA
Trigger: AGCCAGTCGCAGCGAATACCATCGGATCCAGCACCA...ACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCTGATGGACGTAGACTTCTGCTCCCCGTAATCTTCCAGCTTCCGAGACATGGATGCCAGCCATCTCCATaGAGTACCAGCGAGCCCCCT +
Preference number: 2 (lower is better)
Translates to: ADGRRLLLPVIFQLPRHGCQPSP*STSEPP
Trigger: AGGGGGCTCGCTGGTACTCCATGGAGATGGCTGGCA...TCCATGTCTCGGAAGCTGGAAGATTACGGGGAGCAGAAGTCTACGTCCATCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp CAGCTGCAGTTCCCCGCGGCGTTTGACCTCAAAGCCCTTGAGCTCAGCCAGAGAGTTCAACATGGCGCCTaGGTAGGAGATGGTCACTTT +
Preference number: 2 (lower is better)
Translates to: QLQFPAAFDLKALELSQRVQHGA*VGDGHF
Trigger: AAAGTGACCATCTCCTACCCAGGCGCCATGTTGAAC...TCTCTGGCTGAGCTCAAGGGCTTTGAGGTCAAACGCCGCGGGGAACTGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CAA 90 bp AGCACGTGTCCGTCGTCCGTCAGCTTATTGAACTCCTGCTCTTGCTaGTTGGGGAAGATGATGTTGGCGTGGAAGGCCTGCACCATCAGC +
Preference number: 2 (lower is better)
Translates to: STCPSSVSLLNSCSC*LGKMMLAWKACTIS
Trigger: GCTGATGGTGCAGGCCTTCCACGCCAACATCATCTTCCCCAACAAGCAAGAGCAGGAGTTCAATAAGCTGACGGACGACGGACACGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CAA 90 bp GTCCAGCACGTGTCCGTCGTCCGTCAGCTTATTGAACTCCTGCTCTaGCTTGTTGGGGAAGATGATGTTGGCGTGGAAGGCCTGCACCAT +
Preference number: 2 (lower is better)
Translates to: VQHVSVVRQLIELLL*LVGEDDVGVEGLHH
Trigger: ATGGTGCAGGCCTTCCACGCCAACATCATCTTCCCCAACAAGCAAGAGCAGGAGTTCAATAAGCTGACGGACGACGGACACGTGCTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CAA 90 bp CTTGAGCCATTTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTGCTaGGAAAATGGCAAGTGGGATGGCCACTATGATCCACTCGGCTCC +
Preference number: 2 (lower is better)
Translates to: LEPFPEKVLPHRGLC*ENGKWDGHYDPLGS
Trigger: GGAGCCGAGTGGATCATAGTGGCCATCCCACTTGCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATGGCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672002.1
3UTR-3UTR TCA 90 bp CACGGTGTCCACGTAGAAGGAGTTTTCCCGCTGGCAGATGGTGGTGAGACGCTCCCTCATCGGGTTCATTaGAGACACAAAAGGGGCCTT +
Preference number: 2 (lower is better)
Translates to: HGVHVEGVFPLADGGETLPHRVH*RHKRGL
Trigger: AAGGCCCCTTTTGTGTCTTCAATGAACCCGATGAGG...GAGCGTCTCACCACCATCTGCCAGCGGGAAAACTCCTTCTACGTGGACACCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp CCAGGTGCACCAGGGCCCGGAACAGTAACGGAACCTGAGTCTCATATACGCCCTCCTCTTCAAAGTTGGTaGCTTGCTCCACAGGCACTT +
Preference number: 2 (lower is better)
Translates to: PGAPGPGTVTEPESHIRPPLQSW*LAPQAL
Trigger: AAGTGCCTGTGGAGCAAGTCACCAACTTTGAAGAGG...AGGGCGTATATGAGACTCAGGTTCCGTTACTGTTCCGGGCCCTGGTGCACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCTTGCTCCAGGCTTATTaGAGTCACAGGCAGCACAGG +
Preference number: 2 (lower is better)
Translates to: VQEATEAWKSIHCVRNGALLQAY*SHRQHR
Trigger: CCTGTGCTGCCTGTGACTTCAATAAGCCTGGAGCAA...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCACCAGCGTCATCTCGATGGCAGAGGAGTCGTAGGGCGCCTGACAGTTGGAGCCATCACCTGGTTGTCTaGATAGATGTTGTGGTACTG +
Preference number: 2 (lower is better)
Translates to: PPASSRWQRSRRAPDSWSHHLVV*IDVVVL
Trigger: CAGTACCACAACATCTATGCAGACAACCAGGTGATG...GCTCCAACTGTCAGGCGCCCTACGACTCCTCTGCCATCGAGATGACGCTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp TGCAGGGTGAAGGCCATCAGCTTCTTCTGTAGAACTTCCACCAGCGTCATCTCGGCATGTTGGCTGCCTTaGTGTACAGCACGTCCAGCC +
Preference number: 2 (lower is better)
Translates to: CRVKAISFFCRTSTSVISACWLP*CTARPA
Trigger: GGCTGGACGTGCTGTACAGCAAGGCAGCCAACATGC...CGAGATGACGCTGGTGGAAGTTCTACAGAAGAAGCTGATGGCCTTCACCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGTGTTCCTGGGGACCCGATTTACCTTaGGATACGAAGCACCCTCCT +
Preference number: 2 (lower is better)
Translates to: PSMSGADSSALISLMCSWGPDLP*DTKHPP
Trigger: AGGAGGGTGCTTCGTATCGCAAGGTAAATCGGGTCC...CCAGGAACACATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCAATGTTCCGGAATAATCGCTGGATGGCTCTaGAGATGGTCTTCAGGTCAG +
Preference number: 2 (lower is better)
Translates to: PGSPGGTTCRSAGQCSGIIAGWL*RWSSGQ
Trigger: CTGACCTGAAGACCATCTGCAGAGCCATCCAGCGAT...TATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GGTGATGTACTCCACGTAAGCGATGGCATCTTCCACACGGCGCTTCTTTGTACACAGTGGTCTGGTCACTaGAAGCACGGGGATGTGGCC +
Preference number: 2 (lower is better)
Translates to: GDVLHVSDGIFHTALLCTQWSGH*KHGDVA
Trigger: GGCCACATCCCCGTGCTTCCAGTGACCAGACCACTG...TGTACAAAGAAGCGCCGTGTGGAAGATGCCATCGCTTACGTGGAGTACATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp TCAAAGCCCTTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCCCCCGTTCCCTGGCCTaGGGTCACAGGTTTGGACAG +
Preference number: 2 (lower is better)
Translates to: SKPLSSAREPSSLNTAYLPRSLA*GHRFGQ
Trigger: CTGTCCAAACCTGTGACCCCAGGCCAGGGAACGGGG...GAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAAGGGCTTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp TGTAGACCATGTTGGAGCGAGGAAGGACCCGATTTACCTTGCGATACGAAGCACCCACCCCACCAGGTGTaGTGCAGGAAGCAACAGAGG +
Preference number: 2 (lower is better)
Translates to: CRPCWSEEGPDLPCDTKHPPHQV*CRKQQR
Trigger: CCTCTGTTGCTTCCTGCACCACACCTGGTGGGGTGG...GTGCTTCGTATCGCAAGGTAAATCGGGTCCTTCCTCGCTCCAACATGGTCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CGCAAGGTCTTCTCAACCCGCTGCAGCAGGAAGTCAAAGGCGGCAGGATTCATCGGCTTTTCCTCCCTCTaGGAGGCAGGACAAAGAACT +
Preference number: 2 (lower is better)
Translates to: RKVFSTRCSRKSKAAGFIGFSSL*EAGQRT
Trigger: AGTTCTTTGTCCTGCCTCCCAGAGGGAGGAAAAGCC...GATGAATCCTGCCGCCTTTGACTTCCTGCTGCAGCGGGTTGAGAAGACCTTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp CTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGGATACTCCCTGGTTACTCCACGTAAGCGATaGCATCTTCCACACGGCGCT +
Preference number: 2 (lower is better)
Translates to: LCGPVRGGTGRYGGYSLVTPRKR*HLPHGA
Trigger: AGCGCCGTGTGGAAGATGCCATCGCTTACGTGGAGT...AACCAGGGAGTATCCGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp TGCAGGGTGAAGGCCATCAGCTTCTTCTGTAGAACTTCCACCAGCGTCATCTCGGCTCCCCCTGCTTTCTaGGAGTCTTGCAGTCCACAG +
Preference number: 2 (lower is better)
Translates to: CRVKAISFFCRTSTSVISAPPAF*ESCSPQ
Trigger: CTGTGGACTGCAAGACTCCCAGAAAGCAGGGGGAGC...CGAGATGACGCTGGTGGAAGTTCTACAGAAGAAGCTGATGGCCTTCACCCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCAGGTGCACCAGGGCCCGGAACAGTAACGGAACCTGAGTCTCATATACGCCCTGGGGCCTTCATATTCTaGCTTGGGGGTGAACTCAAA +
Preference number: 2 (lower is better)
Translates to: PGAPGPGTVTEPESHIRPGAFIF*LGGELK
Trigger: TTTGAGTTCACCCCCAAGCCAGAATATGAAGGCCCC...AGGGCGTATATGAGACTCAGGTTCCGTTACTGTTCCGGGCCCTGGTGCACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GGTGATGTACTCCACGTAAGCGATGGCATCTTCCACACGGCGCTTCTTTGTACATCCATGTGGATGCACTaGGGCGCCTTGTACTCCCCC +
Preference number: 2 (lower is better)
Translates to: GDVLHVSDGIFHTALLCTSMWMH*GALYSP
Trigger: GGGGGAGTACAAGGCGCCCCAGTGCATCCACATGGA...TGTACAAAGAAGCGCCGTGTGGAAGATGCCATCGCTTACGTGGAGTACATCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp ACTCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTCAGAGTCAGGCATGTTaGCTGCCTTGCTGTACAGCA +
Preference number: 2 (lower is better)
Translates to: TRRHPPGEAGLGSAYSPGQSQAC*LPCCTA
Trigger: TGCTGTACAGCAAGGCAGCCAACATGCCTGACTCTG...ACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CAA 90 bp GCCACCTTGGCTACAGAGCCATACACCTCTTCCAGCGTGCTGCCCTaGAGGAAGGCCTCAAACACCGAGGATTGGAAGATCTTAATCAGC +
Preference number: 2 (lower is better)
Translates to: ATLATEPYTSSSVLP*RKASNTEDWKILIS
Trigger: GCTGATTAAGATCTTCCAATCCTCGGTGTTTGAGGCCTTCCTCAAGGGCAGCACGCTGGAAGAGGTGTATGGCTCTGTAGCCAAGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CAA 90 bp TTGATCTCAACAGTGGCTTGGTCATCGAACTCCATGACAAGACAGTaGTCATCAGCCTCCTTTCCACCCAGGTCAGGGCGGGCTGTAGGG +
Preference number: 2 (lower is better)
Translates to: LISTVAWSSNSMTRQ*SSASFPPRSGRAVG
Trigger: CCCTACAGCCCGCCCTGACCTGGGTGGAAAGGAGGCTGATGACAACTGTCTTGTCATGGAGTTCGATGACCAAGCCACTGTTGAGATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp ATGGCATCTTCCACACGGCGCTTCTTTGTACAGAGGATGATGCGGTTGAAGTTGCTCCATGCAAACAGGTaGGACTCCAGCCCCACCAGG +
Preference number: 2 (lower is better)
Translates to: MASSTRRFFVQRMMRLKLLHANR*DSSPTR
Trigger: CCTGGTGGGGCTGGAGTCTCACCTGTTTGCATGGAG...CAACTTCAACCGCATCATCCTCTGTACAAAGAAGCGCCGTGTGGAAGATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CCTCCACGTTGGATTCCTCCGCCTCTTCCTCCTCCTCCCCATCTCTTTCCTCCTTATTCACCTGGTTTGTaGTGTTGGTGTCCAGGGACA +
Preference number: 2 (lower is better)
Translates to: PPRWIPPPLPPPPHLFPPYSPGL*CWCPGT
Trigger: TGTCCCTGGACACCAACATCACAAACCAGGTGAATA...AGGAGGAAAGAGATGGGGAGGAGGAGGAAGAGGCGGAGGAATCCAACGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCGTCCGTCAGCTTATTaGACTCCTGCTCTTGCTTGT +
Preference number: 2 (lower is better)
Translates to: VQEATEAWKSIHCVRNGARPSAY*TPALAC
Trigger: ACAAGCAAGAGCAGGAGTTCAATAAGCTGACGGACG...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp ACACAGGTCCAGGTCGCGGCAGAAGTTACAGCTGCGGCAGATGACCTCAGGAAGAACTCAGCGATGAGCTaGAGGAAGAGCTTCTTCATC +
Preference number: 2 (lower is better)
Translates to: TQVQVAAEVTAAADDLRKNSAMS*RKSFFI
Trigger: GATGAAGAAGCTCTTCCTGCAGCTCATCGCTGAGTT...CTTCCTGAGGTCATCTGCCGCAGCTGTAACTTCTGCCGCGACCTGGACCTGTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp AGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCAGACCAGGTCCTGCAGGCCTGTGGCAAAAACTaGAAAATGTTCCAGTTGTTT +
Preference number: 2 (lower is better)
Translates to: RHAGLLHPAALQADQVLQACGKN*KMFQLF
Trigger: AAACAACTGGAACATTTTGCAGTTTTTGCCACAGGC...CTGCAGGACCTGGTCTGCCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp ATAACCATGTCTACATGTTCCTTGCTGAGTAACACACAGAAGACTCAGGCTGCTTCCTCCTCACGGGGGTaGTCCCTGGAGCACTGCGCC +
Preference number: 2 (lower is better)
Translates to: ITMSTCSLLSNTQKTQAASSSRG*SLEHCA
Trigger: GGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGA...AGCAGCCTGAGTCTTCTGTGTGTTACTCAGCAAGGAACATGTAGACATGGTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp CGGTTCTCAGAGATGAGCTCGAATAGCTCAGAGTCAGGCATGTTGGCTGCCTTGTGGAAGCCTATCTCCTaGTGCATGCTCAGACCGTGG +
Preference number: 2 (lower is better)
Translates to: RFSEMSSNSSESGMLAALWKPIS*CMLRPW
Trigger: CCACGGTCTGAGCATGCAGCAGGAGATAGGCTTCCA...CAAGGCAGCCAACATGCCTGACTCTGAGCTATTCGAGCTCATCTCTGAGAACCG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp CTGCTGGATCACGTCGAAGCTGATCCCCATGCTGTCGGCCCCCTCCATGTCGTTAGCTTATTGAACTCCTaGTCTTGCTTGTTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: LLDHVEADPHAVGPLHVVSLLNS*SCLLGK
Trigger: CTTCCCCAACAAGCAAGAGCAGGAGTTCAATAAGCT...AACGACATGGAGGGGGCCGACAGCATGGGGATCAGCTTCGACGTGATCCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp GCGATACGAAGCACCCTCCTCCGCTTTAGCGACTCGCTGGTTCACGTAGAACACAAGATCTTAATCAGCTaGAGTTCCCCGCGGCGTTTG +
Preference number: 2 (lower is better)
Translates to: AIRSTLLRFSDSLVHVEHKILIS*SSPRRL
Trigger: CAAACGCCGCGGGGAACTGCAGCTGATTAAGATCTT...GTGTTCTACGTGAACCAGCGAGTCGCTAAAGCGGAGGAGGGTGCTTCGTATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACAGTCAGGGTGGTCAGTaGTCTGGTCACTGGAAGCAC +
Preference number: 2 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNSQGGQ*SGHWKH
Trigger: GTGCTTCCAGTGACCAGACCACTGACCACCCTGACT...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp ATATACCATCTGTGTCCAGCTCTAAGGGCCTCCCAATCTGCTCGATCAGCTCCCTCACGGGTTAGGGTCTaGATTCCTGGGGAAACCAGC +
Preference number: 2 (lower is better)
Translates to: IYHLCPALRASQSARSAPSRVRV*IPGETS
Trigger: GCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA...GGGAGCTGATCGAGCAGATTGGGAGGCCCTTAGAGCTGGACACAGATGGTATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672742.1
3UTR-3UTR CCA 90 bp TTTCCTGAGGCTGATAGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCCTTTCTGCTTCCAGCTaGTCCTGTGTGGAGGTGAAG +
Preference number: 2 (lower is better)
Translates to: FPEADRGFPLDPAPNKQGLSASS*SCVEVK
Trigger: CTTCACCTCCACACAGGACCAGCTGGAAGCAGAAAG...GCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCTATCAGCCTCAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCTGTGAGGCTCTCGTCTaGGGTGTCTGCATTTCTGAT +
Preference number: 2 (lower is better)
Translates to: VQEATEAWKSIHCVRNGACEALV*GVCISD
Trigger: ATCAGAAATGCAGACACCCCAGACGAGAGCCTCACA...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CGCACCATATACCATCTGTGTCCAGCTCTAAGGGCCTCCCAATCTGCTCGATCACTGACACAGAATACGTaGCCAGAGTCTGGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: RTIYHLCPALRASQSARSLTQNT*PESGAA
Trigger: AGCAGCCCCAGACTCTGGCCACGTATTCTGTGTCAG...TGATCGAGCAGATTGGGAGGCCCTTAGAGCTGGACACAGATGGTATATGGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCTTCTCTGACTCCAGCTaGTGCTGGATCCGATGGTAT +
Preference number: 2 (lower is better)
Translates to: VQEATEAWKSIHCVRNGAFSDSS*CWIRWY
Trigger: ATACCATCGGATCCAGCACCAGCTGGAGTCAGAGAA...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGTGTTCCTGGGATTGTAGACCATGTTaGAGCGAGGAAGGACCCGAT +
Preference number: 2 (lower is better)
Translates to: PSMSGADSSALISLMCSWDCRPC*SEEGPD
Trigger: ATCGGGTCCTTCCTCGCTCCAACATGGTCTACAATC...CCAGGAACACATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCAATGTTCCGGAATAGCTCCACACACACTGTaGAGTAACAGCCTGAACTGT +
Preference number: 2 (lower is better)
Translates to: PGSPGGTTCRSAGQCSGIAPHTL*SNSLNC
Trigger: ACAGTTCAGGCTGTTACTCCACAGTGTGTGTGGAGC...TATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CAA 90 bp GACAGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATaGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAG +
Preference number: 2 (lower is better)
Translates to: DSTLHTYLMNSRAGL*SSKWEPGRTGNISE
Trigger: CTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
3UTR CAA 90 bp ACCGAGGATTGGAAGATCTTAATCAGCTGCAGTTCCCCGCGGCGTTaGACCTCAAAGCCCTTGAGCTCAGCCAGAGAACCGTCTTCATTG +
Preference number: 2 (lower is better)
Translates to: TEDWKILISCSSPRR*TSKPLSSAREPSSL
Trigger: CAATGAAGACGGTTCTCTGGCTGAGCTCAAGGGCTTTGAGGTCAAACGCCGCGGGGAACTGCAGCTGATTAAGATCTTCCAATCCTCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp CCATTCATTTGTGGTATGACCACAAAGGCAGCCCCTCTGACCTCAGTTTCCTTACAGACTGATGGCTCCTaGCCCTCAACCACGCCCTCT +
Preference number: 2 (lower is better)
Translates to: PFICGMTTKAAPLTSVSLQTDGS*PSTTPS
Trigger: AGAGGGCGTGGTTGAGGGTCAGGAGCCATCAGTCTG...TAAGGAAACTGAGGTCAGAGGGGCTGCCTTTGTGGTCATACCACAAATGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR-3UTR TCA 90 bp GGCATGAACTCGCCCCTCCACTGCCAGGCCATCTTCCGCTGGCAGTTTGCTCCATCTTGCAGTCCACAGTaGATACGAGATGAAACTTTT +
Preference number: 2 (lower is better)
Translates to: GMNSPLHCQAIFRWQFAPSCSPQ*IRDETF
Trigger: AAAAGTTTCATCTCGTATTCACTGTGGACTGCAAGA...TGGAGCAAACTGCCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGTTCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp AGATGTCCTCTGGTAGGTTCCCAATGGGAATGTGAAAGTACCTGCTCATCTCGACGTCCAGGTGGTAGATaGGTGGACACTCGATGCGGC +
Preference number: 2 (lower is better)
Translates to: RCPLVGSQWECESTCSSRRPGGR*VDTRCG
Trigger: GCCGCATCGAGTGTCCACTCATCTACCACCTGGACG...TCGAGATGAGCAGGTACTTTCACATTCCCATTGGGAACCTACCAGAGGACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp GATCCCGAAGAGCGCTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGCGAATATCAAAGTCTTaGAGGGAAGAGCTCTTGAGC +
Preference number: 2 (lower is better)
Translates to: DPEERFVGLCVVVQVDMARISKS*REELLS
Trigger: GCTCAAGAGCTCTTCCCTTCAAGACTTTGATATTCG...CGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAGCGCTCTTCGGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGATGGAAAAGCATTCACTaGGTGAGAAACGGCGCCCAG +
Preference number: 2 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRWKSIH*VRNGAQ
Trigger: CTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCA...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp TGCAGGGTGAAGGCCATCAGCTTCTTCTGTAGAACTTCCACCAGCGTCATCTCGTCGTCCTCATTTTCCTaGTCATCCTCTGCTCCCCCT +
Preference number: 2 (lower is better)
Translates to: CRVKAISFFCRTSTSVISSSSFS*SSSAPP
Trigger: AGGGGGAGCAGAGGATGAGCAGGAAAATGAGGACGA...CGAGATGACGCTGGTGGAAGTTCTACAGAAGAAGCTGATGGCCTTCACCCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp CGCACCATATACCATCTGTGTCCAGCTCTAAGGGCCTCCCAATCTGCTCGATCATCTGACTCCAGCTGGTaGTGGATCCGATGGTATTCG +
Preference number: 2 (lower is better)
Translates to: RTIYHLCPALRASQSARSSDSSW*WIRWYS
Trigger: CGAATACCATCGGATCCAGCACCAGCTGGAGTCAGA...TGATCGAGCAGATTGGGAGGCCCTTAGAGCTGGACACAGATGGTATATGGTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp GCTGATGGACGTAGACTTCTGCTCCCCGTAATCTTCCAGCTTCCGAGACATGGAAGAAGGAGTTCAGGATaGACTTGTGGGCCAGCTGCA +
Preference number: 2 (lower is better)
Translates to: ADGRRLLLPVIFQLPRHGRRSSG*TCGPAA
Trigger: TGCAGCTGGCCCACAAGTGCATCCTGAACTCCTTCT...TCCATGTCTCGGAAGCTGGAAGATTACGGGGAGCAGAAGTCTACGTCCATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCAATGTTCCGGAATAATGTATGCACAAACATaGCTACAGGTTCCTCGGGGA +
Preference number: 2 (lower is better)
Translates to: PGSPGGTTCRSAGQCSGIMYAQT*LQVPRG
Trigger: TCCCCGAGGAACCTGTAGGCATGTTTGTGCATACAT...TATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCTTTGGACAGTCAGGGTaGTCAGTGGTCTGGTCACTG +
Preference number: 2 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKIFGQSG*SVVWSL
Trigger: CAGTGACCAGACCACTGACCACCCTGACTGTCCAAA...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp ACAGTAACGGAACCTGAGTCTCATATACGCCCTCGATGTCTGGCGCTGACAGCTTTTGGACAGTCAGGGTaGTCAGTGGTCTGGTCACTG +
Preference number: 2 (lower is better)
Translates to: TVTEPESHIRPRCLALTAFGQSG*SVVWSL
Trigger: CAGTGACCAGACCACTGACCACCCTGACTGTCCAAA...AGCTGTCAGCGCCAGACATCGAGGGCGTATATGAGACTCAGGTTCCGTTACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCTTTTCCTCCCTCTaGGAGGCAGGACAAAGAACT +
Preference number: 2 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNGFSSL*EAGQRT
Trigger: AGTTCTTTGTCCTGCCTCCCAGAGGGAGGAAAAGCC...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp TTTCCTGAGGCTGATAGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTGTGAGGCTCTCGTCTaGGGTGTCTGCATTTCTGAT +
Preference number: 2 (lower is better)
Translates to: FPEADRGFPLDPAPNKQGCEALV*GVCISD
Trigger: ATCAGAAATGCAGACACCCCAGACGAGAGCCTCACA...GCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCTATCAGCCTCAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp ACTCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTGGTCACATCGAAAAGTaGCCCTGGTTAGAAAGACTC +
Preference number: 2 (lower is better)
Translates to: TRRHPPGEAGLGSAYSPGGHIEK*PWLERL
Trigger: GAGTCTTTCTAACCAGGGCCACTTTTCGATGTGACC...ACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR-3UTR CCA 90 bp ACAAGACAGTTGTCATCAGCCTCCTTTCCACCCAGGTCAGGGCGGGCTGTAGGGGCAAAGATGAATGGGTaGACGTACTTCATGTACAGG +
Preference number: 2 (lower is better)
Translates to: TRQLSSASFPPRSGRAVGAKMNG*TYFMYR
Trigger: CCTGTACATGAAGTACGTCCACCCATTCATCTTTGC...CCCTACAGCCCGCCCTGACCTGGGTGGAAAGGAGGCTGATGACAACTGTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCAGAGAGGATGGCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGTTCTTCCTTGGAGGCTaGAAGAATCATGGCAAGGTA +
Preference number: 2 (lower is better)
Translates to: AERMATEASGRSASPGCLFFLGG*KNHGKV
Trigger: TACCTTGCCATGATTCTTCCAGCCTCCAAGGAAGAA...CAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGCCATCCTCTCTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCGGATCTTCAGGTCAATaGAGAGGCGGATGTGGTAGG +
Preference number: 2 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKIGSSGQ*RGGCGR
Trigger: CCTACCACATCCGCCTCTCCATTGACCTGAAGATCC...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672742.1
3UTR CAA 90 bp TTCACCCAGCCCACGACCATGCTCTTCAGGATCCCTTCCATTCATTaGTGGTATGACCACAAAGGCAGCCCCTCTGACCTCAGTTTCCTT +
Preference number: 2 (lower is better)
Translates to: FTQPTTMLFRIPSIH*WYDHKGSPSDLSFL
Trigger: AAGGAAACTGAGGTCAGAGGGGCTGCCTTTGTGGTCATACCACAAATGAATGGAAGGGATCCTGAAGAGCATGGTCGTGGGCTGGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR CAA 90 bp AGTGGACACTCGATGCGGCTGGGAACGTCCTTCAGGGAGGCAAGCTaGCTCTTAATCTCATCACACACCTCTTCAAAGTTGGTGACTTGC +
Preference number: 2 (lower is better)
Translates to: SGHSMRLGTSFREAS*LLISSHTSSKLVTC
Trigger: GCAAGTCACCAACTTTGAAGAGGTGTGTGATGAGATTAAGAGCAAGCTTGCCTCCCTGAAGGACGTTCCCAGCCGCATCGAGTGTCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CAA 90 bp ATCTTAATCAGCTGCAGTTCCCCGCGGCGTTTGACCTCAAAGCCCTaGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTC +
Preference number: 2 (lower is better)
Translates to: ILISCSSPRRLTSKP*SSAREPSSLNTAYL
Trigger: GAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAAGGGCTTTGAGGTCAAACGCCGCGGGGAACTGCAGCTGATTAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp ATGAGCCTCCTTACCTCATCGGGTTCATTGAAGACACAAAAGGGGCCTTCATATTCCCGCTCCCTCCTGTaGCGTCTGAGCTCCCTGAAA +
Preference number: 2 (lower is better)
Translates to: MSLLTSSGSLKTQKGPSYSRSLL*RLSSLK
Trigger: TTTCAGGGAGCTCAGACGTCACAGGAGGGAGCGGGA...ATATGAAGGCCCCTTTTGTGTCTTCAATGAACCCGATGAGGTAAGGAGGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672742.1
3UTR-3UTR TCA 90 bp ATAACCATGTCTACATGTTCCTTGCTGAGTAACACACAGAAGACTCAGGCTGCTGGTGACGTAGGTGAGTaGGGACGGCTCAGCCAGCTC +
Preference number: 2 (lower is better)
Translates to: ITMSTCSLLSNTQKTQAAGDVGE*GRLSQL
Trigger: GAGCTGGCTGAGCCGTCCTCACTCACCTACGTCACC...AGCAGCCTGAGTCTTCTGTGTGTTACTCAGCAAGGAACATGTAGACATGGTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp GAAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTAAGGAGACCTCTCCGTaGCAGGGGAGCCCTCGGGCT +
Preference number: 2 (lower is better)
Translates to: EEIPSIERKKLSENGRSPKETSP*QGSPRA
Trigger: AGCCCGAGGGCTCCCCTGTCACGGAGAGGTCTCCTT...AGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGACAGCCCATTTCTCCATaGAAACAGGTGAGACTCCAG +
Preference number: 2 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRQPISP*KQVRLQ
Trigger: CTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTG...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp TGTAGACCATGTTGGAGCGAGGAAGGACCCGATTTACCTTGCGATACGAAGCACGTGAAGGACAAGGGCTaGAGTGAGCCAAAAGTGAGG +
Preference number: 2 (lower is better)
Translates to: CRPCWSEEGPDLPCDTKHVKDKG*SEPKVR
Trigger: CCTCACTTTTGGCTCACTGCAGCCCTTGTCCTTCAC...GTGCTTCGTATCGCAAGGTAAATCGGGTCCTTCCTCGCTCCAACATGGTCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp CACTGGGTTCTTTACCTGCTGCAGGGCCGCAGGGATGGTGATGATCTTCTGGATAACTCAGCGATGAGCTaGAGGAAGAGCTTCTTCATC +
Preference number: 2 (lower is better)
Translates to: HWVLYLLQGRRDGDDLLDNSAMS*RKSFFI
Trigger: GATGAAGAAGCTCTTCCTGCAGCTCATCGCTGAGTT...ATCCAGAAGATCATCACCATCCCTGCGGCCCTGCAGCAGGTAAAGAACCCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp TCAAAGCCCTTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCTTCCTGCTCATCCTCTaGTCCCCCTGCTTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: SKPLSSAREPSSLNTAYLFLLIL*SPCFLG
Trigger: TCCCAGAAAGCAGGGGGAGCAGAGGATGAGCAGGAA...GAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAAGGGCTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCTCCACGTTGGATTCCTCCGCCTCTTCCTCCTCCTCCCCATCTCTTTCCTCCTCTGAGTGAGCTCATTTaGGACATAATCCTGAGAGAA +
Preference number: 2 (lower is better)
Translates to: PPRWIPPPLPPPPHLFPPLSELI*DIILRE
Trigger: TTCTCTCAGGATTATGTCGCAAATGAGCTCACTCAG...AGGAGGAAAGAGATGGGGAGGAGGAGGAAGAGGCGGAGGAATCCAACGTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GAAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTGCCCCACCAGGGCCTTaGGAACCCGTCTCGTCTCAG +
Preference number: 2 (lower is better)
Translates to: EEIPSIERKKLSENGRSPAPPGP*EPVSSQ
Trigger: CTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGGC...AGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GCGATACGAAGCACCCTCCTCCGCTTTAGCGACTCGCTGGTTCACGTAGAACACAAGGTCTCCTTTGAATaGATGCTGCTGGTGATGTAC +
Preference number: 2 (lower is better)
Translates to: AIRSTLLRFSDSLVHVEHKVSFE*MLLVMY
Trigger: GTACATCACCAGCAGCATCCATTCAAAGGAGACCTT...GTGTTCTACGTGAACCAGCGAGTCGCTAAAGCGGAGGAGGGTGCTTCGTATCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp TCAAAGCCCTTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCCTAATGGCCCAGCTGTaGGTTCTTCTGCAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: SKPLSSAREPSSLNTAYLLMAQL*VLLQQP
Trigger: TGGCTGCTGCAGAAGAACCCACAGCTGGGCCATTAG...GAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAAGGGCTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp CTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGGATACTCCCTGGTTTGTACAGGTAGTAAGTaGCGACAGCATCTGACACAG +
Preference number: 2 (lower is better)
Translates to: LCGPVRGGTGRYGGYSLVCTGSK*RQHLTQ
Trigger: CTGTGTCAGATGCTGTCGCCACTTACTACCTGTACA...AACCAGGGAGTATCCGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp CGCACCATATACCATCTGTGTCCAGCTCTAAGGGCCTCCCAATCTGCTCGATCATTCTCTGACTCCAGCTaGTGCTGGATCCGATGGTAT +
Preference number: 2 (lower is better)
Translates to: RTIYHLCPALRASQSARSFSDSS*CWIRWY
Trigger: ATACCATCGGATCCAGCACCAGCTGGAGTCAGAGAA...TGATCGAGCAGATTGGGAGGCCCTTAGAGCTGGACACAGATGGTATATGGTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACTTTCTGGGAAGCTGTTaGGCAGGACGCACCATATAC +
Preference number: 2 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNFLGSC*AGRTIY
Trigger: GTATATGGTGCGTCCTGCCCAACAGCTTCCCAGAAA...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp TGCAGGGTGAAGGCCATCAGCTTCTTCTGTAGAACTTCCACCAGCGTCATCTCGAGTAGTCAGCCACCTTaGCTACAGAGCCATACACCT +
Preference number: 2 (lower is better)
Translates to: CRVKAISFFCRTSTSVISSSQPP*LQSHTP
Trigger: AGGTGTATGGCTCTGTAGCCAAGGTGGCTGACTACT...CGAGATGACGCTGGTGGAAGTTCTACAGAAGAAGCTGATGGCCTTCACCCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GATCATGCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTACAATGTTGTCCAACTaGTCAGCTATCTTCTTAGAG +
Preference number: 2 (lower is better)
Translates to: DHAPGSMALPVQDPIVDLTMLSN*SAIFLE
Trigger: CTCTAAGAAGATAGCTGACCAGTTGGACAACATTGT...AAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCATGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672742.1
3UTR-3UTR TCA 90 bp CCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGTGAGTTCCGAGAGCCTGTaGCTTTCTTCTGAATCTTCT +
Preference number: 2 (lower is better)
Translates to: PTSTRRSRSRFSLFTWFVSSESL*LSSESS
Trigger: AGAAGATTCAGAAGAAAGTCACAGGCTCTCGGAACT...CACAAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGTGGCATACAGGCAAACGTaGACGTTCATAACCATGTCT +
Preference number: 2 (lower is better)
Translates to: PTSTRRSRSRFSLFTWFVAYRQT*TFITMS
Trigger: AGACATGGTTATGAACGTGCACGTTTGCCTGTATGC...CACAAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCGTACAGGCAAACACGTaGATGTTCGTAACTATGTCT +
Preference number: 2 (lower is better)
Translates to: VQEATEAWKSIHCVRNGAVQANT*MFVTMS
Trigger: AGACATAGTTACGAACATGCACGTGTTTGCCTGTAC...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCTGAACTGTTGATCTCAACAGTGGCTTGGTCATCGAACTCCATGACAAGACAGTGGGCATCTGGTTGCTaGGCACAGTGTCCAGCACAA +
Preference number: 2 (lower is better)
Translates to: PELLISTVAWSSNSMTRQWASGC*AQCPAQ
Trigger: TTGTGCTGGACACTGTGCGCAGCAACCAGATGCCCA...CTGTCTTGTCATGGAGTTCGATGACCAAGCCACTGTTGAGATCAACAGTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp AAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTTGGCATCAGGAGGCCTaGCACGGACGCAGAGGCACC +
Preference number: 2 (lower is better)
Translates to: KKFPASRERNCQRMEGLLWHQEA*HGRRGT
Trigger: GGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCA...AAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCATTTCATACTTGTTTaGTGCCCTGTGAAATTGGCC +
Preference number: 2 (lower is better)
Translates to: VQEATEAWKSIHCVRNGAHFILV*CPVKLA
Trigger: GGCCAATTTCACAGGGCACCAAACAAGTATGAAATG...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCTGAACTGTTGATCTCAACAGTGGCTTGGTCATCGAACTCCATGACAAGACAGATGAAGCAGAGAGGATaGCGACCGAAGCCAGCGGTA +
Preference number: 2 (lower is better)
Translates to: PELLISTVAWSSNSMTRQMKQRG*RPKPAV
Trigger: TACCGCTGGCTTCGGTCGCCATCCTCTCTGCTTCAT...CTGTCTTGTCATGGAGTTCGATGACCAAGCCACTGTTGAGATCAACAGTTCAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CACGTCCAGCCAGTAGTCAGCCACCTTGGCTACAGAGCCATACACCTCTTCCAGTCCGCCATAGTTAGATaGATCCATCCAGAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: HVQPVVSHLGYRAIHLFQSAIVR*IHPEKK
Trigger: TTTCTTCTCTGGATGGATCCATCTAACTATGGCGGA...CTGGAAGAGGTGTATGGCTCTGTAGCCAAGGTGGCTGACTACTGGCTGGACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GAAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTCTGGGGCTGCTCCGTaGCCATCCGGCACATGTCCT +
Preference number: 2 (lower is better)
Translates to: EEIPSIERKKLSENGRSPSGAAP*PSGTCP
Trigger: AGGACATGTGCCGGATGGCCACGGAGCAGCCCCAGA...AGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp TTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCTTCTTCAATCACAGGCAGCACAGGTaGCTTCGTCCACCATGGCAG +
Preference number: 2 (lower is better)
Translates to: LSSAREPSSLNTAYLFFNHRQHR*LRPPWQ
Trigger: CTGCCATGGTGGACGAAGCCACCTGTGCTGCCTGTG...ATTGAAGAAGAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCTGAACTGTTGATCTCAACAGTGGCTTGGTCATCGAACTCCATGACAAGACAGCAGGCCATCTTCCGCTaGCAGTTTGCTCCAGGCTTA +
Preference number: 2 (lower is better)
Translates to: PELLISTVAWSSNSMTRQQAIFR*QFAPGL
Trigger: TAAGCCTGGAGCAAACTGCCAGCGGAAGATGGCCTG...CTGTCTTGTCATGGAGTTCGATGACCAAGCCACTGTTGAGATCAACAGTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCTGAACTGTTGATCTCAACAGTGGCTTGGTCATCGAACTCCATGACAAGACAGGACTCCAGCTGGTGCTaGATCCGATGGTATTCGCTG +
Preference number: 2 (lower is better)
Translates to: PELLISTVAWSSNSMTRQDSSWC*IRWYSL
Trigger: CAGCGAATACCATCGGATCCAGCACCAGCTGGAGTC...CTGTCTTGTCATGGAGTTCGATGACCAAGCCACTGTTGAGATCAACAGTTCAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp AGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTTCACAAACTGCTCCTGTaGGGCTGTGGGGCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: RNSQHREKEIVREWKVSFHKLLL*GCGASP
Trigger: TGGGCTGGCCCCACAGCCTCACAGGAGCAGTTTGTG...AAAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp TTTCCTGAGGCTGATAGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTTGTTTGGTGCCCTGTaGAATTGGCCTTTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: FPEADRGFPLDPAPNKQGLFGAL*NWPFFF
Trigger: AAAGAAGAAAGGCCAATTTCACAGGGCACCAAACAA...GCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCTATCAGCCTCAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CCTTGTAGGCGAGCAGGAATCGCTGGATGGCTCTGCAGATGGTCTTCAGGTCAGTCACATTGGTCGTCTTaGAGACAAAATTTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: PCRRAGIAGWLCRWSSGQSHWSS*RQNFLG
Trigger: TCCCAGAAAATTTTGTCTTCAAGACGACCAATGTGA...CTGACCTGAAGACCATCTGCAGAGCCATCCAGCGATTCCTGCTCGCCTACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp TGCAGGGTGAAGGCCATCAGCTTCTTCTGTAGAACTTCCACCAGCGTCATCTCGCGAATATCAAAGTCTTaGAGGGAAGAGCTCTTGAGC +
Preference number: 2 (lower is better)
Translates to: CRVKAISFFCRTSTSVISRISKS*REELLS
Trigger: GCTCAAGAGCTCTTCCCTTCAAGACTTTGATATTCG...CGAGATGACGCTGGTGGAAGTTCTACAGAAGAAGCTGATGGCCTTCACCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCAATGTTCCGGAATATTCATACTTGTTTGGTaGCCTGTGAAATTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: PGSPGGTTCRSAGQCSGIFILVW*PVKLAF
Trigger: AAAGGCCAATTTCACAGGGCACCAAACAAGTATGAA...TATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp GCGATACGAAGCACCCTCCTCCGCTTTAGCGACTCGCTGGTTCACGTAGAACACTTCATACTTGTTTGGTaGCCTGTGAAATTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: AIRSTLLRFSDSLVHVEHFILVW*PVKLAF
Trigger: AAAGGCCAATTTCACAGGGCACCAAACAAGTATGAA...GTGTTCTACGTGAACCAGCGAGTCGCTAAAGCGGAGGAGGGTGCTTCGTATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp TTTCCTGAGGCTGATAGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCCTGAGTGAGCTCATTTaGGACATAATCCTGAGAGAA +
Preference number: 2 (lower is better)
Translates to: FPEADRGFPLDPAPNKQGLSELI*DIILRE
Trigger: TTCTCTCAGGATTATGTCGCAAATGAGCTCACTCAG...GCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCTATCAGCCTCAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCTTACCTCATCGGGTTCATTGAAGACACAAAAGGGGCCTTCATATTCTGGCTTTGGAAGCCTATCTCCTaGTGCATGCTCAGACCGTGG +
Preference number: 2 (lower is better)
Translates to: PYLIGFIEDTKGAFIFWLWKPIS*CMLRPW
Trigger: CCACGGTCTGAGCATGCAGCAGGAGATAGGCTTCCA...AAGCCAGAATATGAAGGCCCCTTTTGTGTCTTCAATGAACCCGATGAGGTAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672742.1
3UTR-3UTR GCA 90 bp GTAGAACACACGGGGGATGCTCAGCCTGATGCAGTGCAAGTCACTGCCAACGAGATCTGTGGTGAATACTaGAAACATAAGGAGACCTCT +
Preference number: 2 (lower is better)
Translates to: VEHTGDAQPDAVQVTANEICGEY*KHKETS
Trigger: AGAGGTCTCCTTATGTTTGCAGTATTCACCACAGAT...CTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAGCATCCCCCGTGTGTTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GAAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTCAGTGGTCTGGTCACTaGAAGCACGGGGATGTGGCC +
Preference number: 2 (lower is better)
Translates to: EEIPSIERKKLSENGRSPQWSGH*KHGDVA
Trigger: GGCCACATCCCCGTGCTTCCAGTGACCAGACCACTG...AGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp GAAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTAGGGCGCCTGACAGTTaGAGCAGAGCCACTGAGGCA +
Preference number: 2 (lower is better)
Translates to: EEIPSIERKKLSENGRSPRAPDS*SRATEA
Trigger: TGCCTCAGTGGCTCTGCTCCAACTGTCAGGCGCCCT...AGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp TCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTCAGAGCAAAGATGAATaGGTGGACGTACTTCATGTA +
Preference number: 2 (lower is better)
Translates to: SPTSTRRSRSRFSLFTWFQSKDE*VDVLHV
Trigger: TACATGAAGTACGTCCACCCATTCATCTTTGCTCTG...AAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp AAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTTCCCGCTCCCTCCTGTaGCGTCTGAGCTCCCTGAAA +
Preference number: 2 (lower is better)
Translates to: KKFPASRERNCQRMEGLLSRSLL*RLSSLK
Trigger: TTTCAGGGAGCTCAGACGTCACAGGAGGGAGCGGGA...AAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp CCTGAACTGTTGATCTCAACAGTGGCTTGGTCATCGAACTCCATGACAAGACAGAATGGATGCTGCTGGTaGTGTACTCCACGTAAGCGA +
Preference number: 2 (lower is better)
Translates to: PELLISTVAWSSNSMTRQNGCCW*CTPRKR
Trigger: TCGCTTACGTGGAGTACATCACCAGCAGCATCCATT...CTGTCTTGTCATGGAGTTCGATGACCAAGCCACTGTTGAGATCAACAGTTCAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp TTTCCTGAGGCTGATAGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTTCATACTTGTTTGGTaGCCTGTGAAATTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: FPEADRGFPLDPAPNKQGFILVW*PVKLAF
Trigger: AAAGGCCAATTTCACAGGGCACCAAACAAGTATGAA...GCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCTATCAGCCTCAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp AAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTCTTCTTCAGGTGCTCTaGCGAGGCCAGGGCCACATC +
Preference number: 2 (lower is better)
Translates to: KKFPASRERNCQRMEGLLLLQVL*RGQGHI
Trigger: GATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAG...AAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp CGCACCATATACCATCTGTGTCCAGCTCTAAGGGCCTCCCAATCTGCTCGATCATTCAGCTTATTCACCTaGTTTGTGATGTTGGTGTCC +
Preference number: 2 (lower is better)
Translates to: RTIYHLCPALRASQSARSFSLFT*FVMLVS
Trigger: GGACACCAACATCACAAACCAGGTGAATAAGCTGAA...TGATCGAGCAGATTGGGAGGCCCTTAGAGCTGGACACAGATGGTATATGGTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp GAAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTCAGGTGGTAGATGAGTaGACACTCGATGCGGCTGGG +
Preference number: 2 (lower is better)
Translates to: EEIPSIERKKLSENGRSPQVVDE*TLDAAG
Trigger: CCCAGCCGCATCGAGTGTCCACTCATCTACCACCTG...AGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCTGAACTGTTGATCTCAACAGTGGCTTGGTCATCGAACTCCATGACAAGACAGTTTGACACGTGGCACTaGGTTCTTTACCTGCTGCAG +
Preference number: 2 (lower is better)
Translates to: PELLISTVAWSSNSMTRQFDTWH*VLYLLQ
Trigger: CTGCAGCAGGTAAAGAACCCAGTGCCACGTGTCAAA...CTGTCTTGTCATGGAGTTCGATGACCAAGCCACTGTTGAGATCAACAGTTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CAA 90 bp ATCATAATCTGGTCTGTCTCAGCATCAGGAAACTTGAGGGGCAGTTaGGTCGTCTCAATGTCAAATGCCAAAACCACAGGGTCAGGTCGT +
Preference number: 2 (lower is better)
Translates to: IIIWSVSASGNLRGS*VVSMSNAKTTGSGR
Trigger: ACGACCTGACCCTGTGGTTTTGGCATTTGACATTGAGACGACCAAACTGCCCCTCAAGTTTCCTGATGCTGAGACAGACCAGATTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672742.1
3UTR-3UTR TCA 90 bp AGATGTCCTCTGGTAGGTTCCCAATGGGAATGTGAAAGTACCTGCTCATCTCGAATGGTGAAGAAGCTCTaGGTGAGCTCATTTGCGACA +
Preference number: 2 (lower is better)
Translates to: RCPLVGSQWECESTCSSRMVKKL*VSSFAT
Trigger: TGTCGCAAATGAGCTCACTCAGAGCTTCTTCACCAT...TCGAGATGAGCAGGTACTTTCACATTCCCATTGGGAACCTACCAGAGGACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp TGCAGGGTGAAGGCCATCAGCTTCTTCTGTAGAACTTCCACCAGCGTCATCTCGTTCATACTTGTTTGGTaGCCTGTGAAATTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: CRVKAISFFCRTSTSVISFILVW*PVKLAF
Trigger: AAAGGCCAATTTCACAGGGCACCAAACAAGTATGAA...CGAGATGACGCTGGTGGAAGTTCTACAGAAGAAGCTGATGGCCTTCACCCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp TTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCTTCTTCAATCTTTCTGCTTCCAGCTaGTCCTGTGTGGAGGTGAAG +
Preference number: 2 (lower is better)
Translates to: LSSAREPSSLNTAYLFFNLSASS*SCVEVK
Trigger: CTTCACCTCCACACAGGACCAGCTGGAAGCAGAAAG...ATTGAAGAAGAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672742.1
3UTR-3UTR TCA 90 bp AAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTTGTTGTGGTACTGGGTaGTCTCCTTCACCCAGCCCA +
Preference number: 2 (lower is better)
Translates to: KKFPASRERNCQRMEGLLCCGTG*SPSPSP
Trigger: TGGGCTGGGTGAAGGAGATCACCCAGTACCACAACA...AAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp TTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCTTCTTCAATGCCTCAGACAGTAGATaGCAGGGACAAACTAAGGCT +
Preference number: 2 (lower is better)
Translates to: LSSAREPSSLNTAYLFFNASDSR*QGQTKA
Trigger: AGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGC...ATTGAAGAAGAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672742.1
3UTR-3UTR CCA 90 bp CCATTCATTTGTGGTATGACCACAAAGGCAGCCCCTCTGACCTCAGTTTCCTTAATCGAAAAGTGGCCCTaGTTAGAAAGACTCTGTGTG +
Preference number: 2 (lower is better)
Translates to: PFICGMTTKAAPLTSVSLIEKWP*LERLCV
Trigger: CACACAGAGTCTTTCTAACCAGGGCCACTTTTCGAT...TAAGGAAACTGAGGTCAGAGGGGCTGCCTTTGTGGTCATACCACAAATGAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR-3UTR CCA 90 bp AAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTATGAAGCAGAGAGGATaGCGACCGAAGCCAGCGGTA +
Preference number: 2 (lower is better)
Translates to: KKFPASRERNCQRMEGLLMKQRG*RPKPAV
Trigger: TACCGCTGGCTTCGGTCGCCATCCTCTCTGCTTCAT...AAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR TCA 90 bp TGTAGACCATGTTGGAGCGAGGAAGGACCCGATTTACCTTGCGATACGAAGCACGGGTGTCTGCATTTCTaGTTTACATTTCATACTTGT +
Preference number: 2 (lower is better)
Translates to: CRPCWSEEGPDLPCDTKHGCLHF*FTFHTC
Trigger: ACAAGTATGAAATGTAAATCAGAAATGCAGACACCC...GTGCTTCGTATCGCAAGGTAAATCGGGTCCTTCCTCGCTCCAACATGGTCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp CCTGAACTGTTGATCTCAACAGTGGCTTGGTCATCGAACTCCATGACAAGACAGCTGAGTGAGCTCATTTaGGACATAATCCTGAGAGAA +
Preference number: 2 (lower is better)
Translates to: PELLISTVAWSSNSMTRQLSELI*DIILRE
Trigger: TTCTCTCAGGATTATGTCGCAAATGAGCTCACTCAG...CTGTCTTGTCATGGAGTTCGATGACCAAGCCACTGTTGAGATCAACAGTTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR GCA 90 bp AGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTTTCTGACTCCAGCTGGTaGTGGATCCGATGGTATTCG +
Preference number: 2 (lower is better)
Translates to: RNSQHREKEIVREWKVSFSDSSW*WIRWYS
Trigger: CGAATACCATCGGATCCAGCACCAGCTGGAGTCAGA...AAAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp TCAAAGCCCTTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCGAAATTGTCAGAGAATaGAAGGTCTCCTTTGAATGG +
Preference number: 2 (lower is better)
Translates to: SKPLSSAREPSSLNTAYLEIVRE*KVSFEW
Trigger: CCATTCAAAGGAGACCTTCCATTCTCTGACAATTTC...GAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAAGGGCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp GAAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTGCACAGAGCAAAGATaGATGGGTGGACGTACTTCA +
Preference number: 2 (lower is better)
Translates to: EEIPSIERKKLSENGRSPCTEQR*MGGRTS
Trigger: TGAAGTACGTCCACCCATTCATCTTTGCTCTGTGCA...AGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR TCA 90 bp GAAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTAACGGTTCTCAGAGATaGGCTCGAATAGCTCAGAGT +
Preference number: 2 (lower is better)
Translates to: EEIPSIERKKLSENGRSPNGSQR*ARIAQS
Trigger: ACTCTGAGCTATTCGAGCTCATCTCTGAGAACCGTT...AGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp AAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTTGTGAGGCTCTCGTCTaGGGTGTCTGCATTTCTGAT +
Preference number: 2 (lower is better)
Translates to: KKFPASRERNCQRMEGLLCEALV*GVCISD
Trigger: ATCAGAAATGCAGACACCCCAGACGAGAGCCTCACA...AAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CCA 90 bp ATAACCATGTCTACATGTTCCTTGCTGAGTAACACACAGAAGACTCAGGCTGCTTTCAGCTTATTCACCTaGTTTGTGATGTTGGTGTCC +
Preference number: 2 (lower is better)
Translates to: ITMSTCSLLSNTQKTQAAFSLFT*FVMLVS
Trigger: GGACACCAACATCACAAACCAGGTGAATAAGCTGAA...AGCAGCCTGAGTCTTCTGTGTGTTACTCAGCAAGGAACATGTAGACATGGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CCA 90 bp TTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCTTCTTCAATGAAATTGTCAGAGAATaGAAGGTCTCCTTTGAATGG +
Preference number: 2 (lower is better)
Translates to: LSSAREPSSLNTAYLFFNEIVRE*KVSFEW
Trigger: CCATTCAAAGGAGACCTTCCATTCTCTGACAATTTC...ATTGAAGAAGAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR GCA 72 bp GCACACCCTCTGCCGACTCCAGACGCTGCCTCTTCCTaGGGGCGAGGCGCTGCCGGGCCTGCAGCTGCCACT +
Preference number: 3 (lower is better)
Translates to: AHPLPTPDAASS*GRGAAGPAAAT
Trigger: AGTGGCAGCTGCAGGCCCGGCAGCGCCTCGCCCGCAGGAAGAGGCAGCGTCTGGAGTCGGCAGAGGGTGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 72 bp ACCATCCCGGATGGCCCCGGGCCTGAGCACACCCTCTaGCGACTCCAGACGCTGCCTCTTCCTGCGGGCGAG +
Preference number: 3 (lower is better)
Translates to: TIPDGPGPEHTL*RLQTLPLPAGE
Trigger: CTCGCCCGCAGGAAGAGGCAGCGTCTGGAGTCGGCAGAGGGTGTGCTCAGGCCCGGGGCCATCCGGGATGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 72 bp CGCTGCCTCTTCCTGCGGGCGAGGCGCTGCCGGGCCTaGAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAG +
Preference number: 3 (lower is better)
Translates to: RCLFLRARRCRA*SCHFFLWNRSQ
Trigger: CTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCTCGCCCGCAGGAAGAGGCAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp CGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTaGCGAGGCCAGGGCCACATCCTGCTCCCGCTCCCT +
Preference number: 3 (lower is better)
Translates to: RSLAHGLLLQVL*RGQGHILLPLP
Trigger: AGGGAGCGGGAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp CTCTGGGCCAAAGACACGAGCCTCCTGGGGAGCCTGTaGGGCCCCCTCCCTCCTGTGAGGCTCTCGTCTGGG +
Preference number: 3 (lower is better)
Translates to: LWAKDTSLLGSL*GPLPPVRLSSG
Trigger: CCCAGACGAGAGCCTCACAGGAGGGAGGGGGCCCCACAGGCTCCCCAGGAGGCTCGTGTCTTTGGCCCAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGCACGGGGATGTGGCCTaGGCATCAGGAGGCCTGGCA +
Preference number: 3 (lower is better)
Translates to: ALAASLTACFFRCSGEARHGDVA*ASGGLA
Trigger: TGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 72 bp CTGGTTCCCAGGGCGGGAGGCTGCCCCAAGATTTCCTaGCAGGGCACAGTCGGCGTGAGGTCCTGGGACTCC +
Preference number: 3 (lower is better)
Translates to: LVPRAGGCPKIS*QGTVGVRSWDS
Trigger: GGAGTCCCAGGACCTCACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCAGCCTCCCGCCCTGGGAACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR TCA 72 bp GTACCTCTGGCCACAGGGAGGTCAGAGGCAGCACACTaGACAGTCGCCAGGGACCAGGCCGGACCCCCACAG +
Preference number: 3 (lower is better)
Translates to: VPLATGRSEAAH*TVARDQAGPPQ
Trigger: CTGTGGGGGTCCGGCCTGGTCCCTGGCGACTGTTCAGTGTGCTGCCTCTGACCTCCCTGTGGCCAGAGGTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR GCA 72 bp AGCCATTCCTCCTGGCTGGTTCCCAGGGCGGGAGGCTaGCCCAAGATTTCCTGCCAGGGCACAGTCGGCGTG +
Preference number: 3 (lower is better)
Translates to: SHSSWLVPRAGG*PKISCQGTVGV
Trigger: CACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCAGCCTCCCGCCCTGGGAACCAGCCAGGAGGAATGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 72 bp CTCTTCCTGCGGGCGAGGCGCTGCCGGGCCTGCAGCTaGCACTTCTTCTTGTGGAACCGGAGCCAGACAAGC +
Preference number: 3 (lower is better)
Translates to: LFLRARRCRACS*HFFLWNRSQTS
Trigger: GCTTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCTCGCCCGCAGGAAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 72 bp GACTCCAGACGCTGCCTCTTCCTGCGGGCGAGGCGCTaGCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAAC +
Preference number: 3 (lower is better)
Translates to: DSRRCLFLRARR*RACSCHFFLWN
Trigger: GTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCTCGCCCGCAGGAAGAGGCAGCGTCTGGAGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp AGGTCAGGGCGGGCTGTAGGGGACAGCCAGAGCAGGTaGTTGTGGCGCTGGAGGTGGCGGGCAAAGAAGAGG +
Preference number: 3 (lower is better)
Translates to: RSGRAVGDSQSR*LWRWRWRAKKR
Trigger: CCTCTTCTTTGCCCGCCACCTCCAGCGCCACAACCACCTGCTCTGGCTGTCCCCTACAGCCCGCCCTGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 72 bp GGGCGAAGTCTCCCGCGCAGCTGCAGTACACAGGCATaGTGGTCTCCTTCACCCCGCGGCACTTCAGGCAGA +
Preference number: 3 (lower is better)
Translates to: GRSLPRSCSTQA*WSPSPRGTSGR
Trigger: TCTGCCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGACTTCGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp AGTGGTCTGGTCACTGGAAGCACGGGGATGTGGCCTTaGCATCAGGAGGCCTGGCACGGACGCAGAGGCACC +
Preference number: 3 (lower is better)
Translates to: SGLVTGSTGMWP*HQEAWHGRRGT
Trigger: GGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTGCTTCCAGTGACCAGACCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp CTGCCAACGAGCGCCCACAGCCTGAACAGGCCGGCCTaGCTGGTCTCGCTGATCTGCACAATCTGCCACGGA +
Preference number: 3 (lower is better)
Translates to: LPTSAHSLNRPA*LVSLICTICHG
Trigger: TCCGTGGCAGATTGTGCAGATCAGCGAGACCAGCCAGGCCGGCCTGTTCAGGCTGTGGGCGCTCGTTGGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp GCTCTGCTGAGTACAGGGCGCCAAGGCTGGGCATCTGGTTGCTGCGCACAGTGTCACGGGGATGTGGCCTaGGCATCAGGAGGCCTGGCA +
Preference number: 3 (lower is better)
Translates to: ALLSTGRQGWASGCCAQCHGDVA*ASGGLA
Trigger: TGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG...ACACTGTGCGCAGCAACCAGATGCCCAGCCTTGGCGCCCTGTACTCAGCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp AAGGTGATCATTCCGGGAAGGGCTCCGACCGCCCCCTCGGCCTCCTGGGAGAGCTCCAGGGCAGGGTTATaGAGCAGCAAGTGGGAACCG +
Preference number: 3 (lower is better)
Translates to: KVIIPGRAPTAPSASWESSRAGL*SSKWEP
Trigger: CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGA...GCTCTCCCAGGAGGCCGAGGGGGCGGTCGGAGCCCTTCCCGGAATGATCACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR TCA 72 bp GGTCCAGGTCGCGGCAGAAGTTACAGCTGCGGCAGATaGCCTCAGGAAGCACGTAGGAGCGGCAGGGGTCTC +
Preference number: 3 (lower is better)
Translates to: GPGRGRSYSCGR*PQEARRSGRGL
Trigger: GAGACCCCTGCCGCTCCTACGTGCTTCCTGAGGTCATCTGCCGCAGCTGTAACTTCTGCCGCGACCTGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp TCTCGATGGCAGAGGAGTCGTAGGGCGCCTGACAGTTaGAGCAGAGCCACTGAGGCAGGACCGCCCCATCCT +
Preference number: 3 (lower is better)
Translates to: SRWQRSRRAPDS*SRATEAGPPHP
Trigger: AGGATGGGGCGGTCCTGCCTCAGTGGCTCTGCTCCAACTGTCAGGCGCCCTACGACTCCTCTGCCATCGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp CGAAGTCTCCCGCGCAGCTGCAGTACACAGGCATGCTaGTCTCCTTCACCCCGCGGCACTTCAGGCAGACCA +
Preference number: 3 (lower is better)
Translates to: RSLPRSCSTQAC*SPSPRGTSGRP
Trigger: TGGTCTGCCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGACTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp GGAGGCCGTGCTCTGCTGAGTACAGGGCGCCAAGGCTaGGCATCTGGTTGCTGCGCACAGTGTCCAGCACAA +
Preference number: 3 (lower is better)
Translates to: GGRALLSTGRQG*ASGCCAQCPAQ
Trigger: TTGTGCTGGACACTGTGCGCAGCAACCAGATGCCCAGCCTTGGCGCCCTGTACTCAGCAGAGCACGGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp GCTGTAGGGGACAGCCAGAGCAGGTGGTTGTGGCGCTaGAGGTGGCGGGCAAAGAAGAGGTCGGAGCCGAAT +
Preference number: 3 (lower is better)
Translates to: AVGDSQSRWLWR*RWRAKKRSEPN
Trigger: ATTCGGCTCCGACCTCTTCTTTGCCCGCCACCTCCAGCGCCACAACCACCTGCTCTGGCTGTCCCCTACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp CTGCTGGATCACGTCGAAGCTGATCCCCATGCTGTCGGCCCCCTCCATGTCGTTCACGGGGATGTGGCCTaGGCATCAGGAGGCCTGGCA +
Preference number: 3 (lower is better)
Translates to: LLDHVEADPHAVGPLHVVHGDVA*ASGGLA
Trigger: TGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG...AACGACATGGAGGGGGCCGACAGCATGGGGATCAGCTTCGACGTGATCCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp CCACCAGCGTCATCTCGATGGCAGAGGAGTCGTAGGGCGCCTGACAGTTGGAGCAGGCTGGGCATCTGGTaGCTGCGCACAGTGTCCAGC +
Preference number: 3 (lower is better)
Translates to: PPASSRWQRSRRAPDSWSRLGIW*LRTVSS
Trigger: GCTGGACACTGTGCGCAGCAACCAGATGCCCAGCCT...GCTCCAACTGTCAGGCGCCCTACGACTCCTCTGCCATCGAGATGACGCTGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp ACACAGGTCCAGGTCGCGGCAGAAGTTACAGCTGCGGCAGATGACCTCAGGAAGAGCCCCACCAGGGCCTaGGGAACCCGTCTCGTCTCA +
Preference number: 3 (lower is better)
Translates to: TQVQVAAEVTAAADDLRKSPTRA*GTRLVS
Trigger: TGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGGCT...CTTCCTGAGGTCATCTGCCGCAGCTGTAACTTCTGCCGCGACCTGGACCTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp CCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAAGTAAATCCTCCACGTaGGATTCCTCCGCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: PPHGGAPWSTAPQPVLHASKSST*DSSASS
Trigger: GGAAGAGGCGGAGGAATCCAACGTGGAGGATTTACT...TGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGACCATGATGGTGGGTTaGGTCTCCTGGACGTGTTCA +
Preference number: 3 (lower is better)
Translates to: ALAASLTACFFRCSGEARTMMVG*VSWTCS
Trigger: TGAACACGTCCAGGAGACCAAACCCACCATCATGGT...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp GCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGTTGGGGAAGATGATGTaGGCGTGGAAGGCCTGCACC +
Preference number: 3 (lower is better)
Translates to: AQLQYTGMLVSFTPRHFRLGKMM*AWKACT
Trigger: GGTGCAGGCCTTCCACGCCAACATCATCTTCCCCAA...CCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp CACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGTACGCTGTCCAGCGTGCTGCCCTaGAGGAAGGCCTCAAACACC +
Preference number: 3 (lower is better)
Translates to: HCASARPSCSGTRPRCTLSSVLP*RKASNT
Trigger: GGTGTTTGAGGCCTTCCTCAAGGGCAGCACGCTGGA...CAGCGTACATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR TCA 72 bp CTCCATGTCAGGAGCACTTGGCCTCGGACTGTCTTCTaGGGCCTCGGCCATCGTGACCTGTCTCCTGCCCTC +
Preference number: 3 (lower is better)
Translates to: LHVRSTWPRTVF*GLGHRDLSPAL
Trigger: GAGGGCAGGAGACAGGTCACGATGGCCGAGGCCTCAGAAGACAGTCCGAGGCCAAGTGCTCCTGACATGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR TCA 72 bp TCATCTCGAAGGCCTGCGACAGGCAGGTGTCCAGGTTaGGGTAGTGACGGATCATGCGCCGGGCTCCATGGC +
Preference number: 3 (lower is better)
Translates to: SSRRPATGRCPG*GSDGSCAGLHG
Trigger: GCCATGGAGCCCGGCGCATGATCCGTCACTACCTCAACCTGGACACCTGCCTGTCGCAGGCCTTCGAGATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 72 bp CCAGCTGCAGCGAGTCATACAGCACCTCCATGTTCTTaGAGCGCTTCACCTCAGCCGCGTCGCCCACCTCCA +
Preference number: 3 (lower is better)
Translates to: PAAASHTAPPCS*SASPQPRRPPP
Trigger: TGGAGGTGGGCGACGCGGCTGAGGTGAAGCGCTGCAAGAACATGGAGGTGCTGTATGACTCGCTGCAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 72 bp CACTGGGGCGCCTTGTACTCCCCCTGGCTGTCCTTCTaGAAGCCTATCTCCTGCTGCATGCTCAGACCGTGG +
Preference number: 3 (lower is better)
Translates to: HWGALYSPWLSF*KPISCCMLRPW
Trigger: CCACGGTCTGAGCATGCAGCAGGAGATAGGCTTCCAGAAGGACAGCCAGGGGGAGTACAAGGCGCCCCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 72 bp GGGGTACATGGCCCCCACGTCCAGGTGGTAGATGAGTaGACACTCGATGCGGCTGGGAACGTCCTTCAGGGA +
Preference number: 3 (lower is better)
Translates to: GVHGPHVQVVDE*TLDAAGNVLQG
Trigger: TCCCTGAAGGACGTTCCCAGCCGCATCGAGTGTCCACTCATCTACCACCTGGACGTGGGGGCCATGTACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGTGGTGCCCTGTGAAATaGGCCTTTCTTCTTTCTGCT +
Preference number: 3 (lower is better)
Translates to: HGDVALASGGLARTQRHPWCPVK*AFLLSA
Trigger: AGCAGAAAGAAGAAAGGCCAATTTCACAGGGCACCA...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp TCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTACCATGATGGTGGGTTaGGTCTCCTGGACGTGTTCA +
Preference number: 3 (lower is better)
Translates to: SSRGCSLEHCASARPSCSTMMVG*VSWTCS
Trigger: TGAACACGTCCAGGAGACCAAACCCACCATCATGGT...ACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp GCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGTTGACCTCAAAGCCCTaGAGCTCAGCCAGAGAACCG +
Preference number: 3 (lower is better)
Translates to: AQLQYTGMLVSFTPRHFRLTSKP*SSAREP
Trigger: CGGTTCTCTGGCTGAGCTCAAGGGCTTTGAGGTCAA...CCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR TCA 72 bp AGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTaGGAAACGGCGCCCAGGGCACTCGCAGCCTCGCTC +
Preference number: 3 (lower is better)
Translates to: RKQQRPGKAFTA*ETAPRALAASL
Trigger: GAGCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR TCA 72 bp CCAGCACAAAGACGGATGCCCTGCGCTGTGAGGGGATaGAGATCCCGAAGAGCGCTTTGTGGGCCTGTGCGT +
Preference number: 3 (lower is better)
Translates to: PAQRRMPCAVRG*RSRRALCGPVR
Trigger: ACGCACAGGCCCACAAAGCGCTCTTCGGGATCTTCATCCCCTCACAGCGCAGGGCATCCGTCTTTGTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 72 bp CCTGGGCTGATGTGGGGACAGAGGCAGAATGCGAAGTaGTCGGCCCACCTCCTGGTACACAGCAAGCATTGC +
Preference number: 3 (lower is better)
Translates to: PGLMWGQRQNAK*SAHLLVHSKHC
Trigger: GCAATGCTTGCTGTGTACCAGGAGGTGGGCCGAGCACTTCGCATTCTGCCTCTGTCCCCACATCAGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR GCA 72 bp GGGCTTGCGGGAGATGATGTAGCGGCAACTCAGCCCTaGATCCTTGACCATCTGGTCTCCCAGGAACTCGGC +
Preference number: 3 (lower is better)
Translates to: GLAGDDVAATQP*ILDHLVSQELG
Trigger: GCCGAGTTCCTGGGAGACCAGATGGTCAAGGATGCAGGGCTGAGTTGCCGCTACATCATCTCCCGCAAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 72 bp TGTGCGGTGCAGGGCAGGGTCATGAAGCAGAGAGGATaGCGACCGAAGCCAGCGGTAGAAGTGCATCACCTG +
Preference number: 3 (lower is better)
Translates to: CAVQGRVMKQRG*RPKPAVEVHHL
Trigger: CAGGTGATGCACTTCTACCGCTGGCTTCGGTCGCCATCCTCTCTGCTTCATGACCCTGCCCTGCACCGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp CAGGGCACAGTCGGCGTGAGGTCCTGGGACTCCTCCTaGCTCTCCCAAAGAACTCGCTTCCTCTTCACAGTG +
Preference number: 3 (lower is better)
Translates to: QGTVGVRSWDSS*LSQRTRFLFTV
Trigger: CACTGTGAAGAGGAAGCGAGTTCTTTGGGAGAGCCAGGAGGAGTCCCAGGACCTCACGCCGACTGTGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGTGGTGCCCTGTGAAATaGGCCTTTCTTCTTTCTGCT +
Preference number: 3 (lower is better)
Translates to: ALAASLTACFFRCSGEARWCPVK*AFLLSA
Trigger: AGCAGAAAGAAGAAAGGCCAATTTCACAGGGCACCA...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp GCTCAGCCTGATGCAGTGCAAGTCACTGCCAACGAGCGCCCACAGCCTGAACAGTCCAGGGCAGGGTTATaGAGCAGCAAGTGGGAACCG +
Preference number: 3 (lower is better)
Translates to: AQPDAVQVTANERPQPEQSRAGL*SSKWEP
Trigger: CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGA...CTGTTCAGGCTGTGGGCGCTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR TCA 72 bp TGTTGGGGTACATGGCCCCCACGTCCAGGTGGTAGATaGGTGGACACTCGATGCGGCTGGGAACGTCCTTCA +
Preference number: 3 (lower is better)
Translates to: CWGTWPPRPGGR*VDTRCGWERPS
Trigger: TGAAGGACGTTCCCAGCCGCATCGAGTGTCCACTCATCTACCACCTGGACGTGGGGGCCATGTACCCCAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR TCA 72 bp TTCTCGTATTTCGCCTGTTCCTCGCGGGACAGTTCATaGAAGGCCCGAGCTGGCCCCTCTGGGAACAAGGGG +
Preference number: 3 (lower is better)
Translates to: FSYFACSSRDSS*KARAGPSGNKG
Trigger: CCCCTTGTTCCCAGAGGGGCCAGCTCGGGCCTTTCATGAACTGTCCCGCGAGGAACAGGCGAAATACGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR TCA 72 bp GCTGGTTCACGTAGAACACACGGGGGATGCTCAGCCTaGTGCAGTGCAAGTCACTGCCAACGAGCGCCCACA +
Preference number: 3 (lower is better)
Translates to: AGSRRTHGGCSA*CSASHCQRAPT
Trigger: TGTGGGCGCTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAGCATCCCCCGTGTGTTCTACGTGAACCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 72 bp TGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATaGAGTGGTACACGGCCACGATGTACGCTGAAACAA +
Preference number: 3 (lower is better)
Translates to: CSLEHCASARPS*SGTRPRCTLKQ
Trigger: TTGTTTCAGCGTACATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 72 bp GCCCCTCCACTGCCAGGCCATCTTCCGCTGGCAGTTTaGTCCAGGCTTATTGAAGTCACAGGCAGCACAGGT +
Preference number: 3 (lower is better)
Translates to: APPLPGHLPLAV*SRLIEVTGSTG
Trigger: ACCTGTGCTGCCTGTGACTTCAATAAGCCTGGAGCAAACTGCCAGCGGAAGATGGCCTGGCAGTGGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR GCA 72 bp GACCATCTGGTCTCCCAGGAACTCGGCCAGGCGCTTTaGTGTGCTGATGGACGTAGACTTCTGCTCCCCGTA +
Preference number: 3 (lower is better)
Translates to: DHLVSQELGQAL*CADGRRLLLPV
Trigger: TACGGGGAGCAGAAGTCTACGTCCATCAGCACAGCAAAGCGCCTGGCCGAGTTCCTGGGAGACCAGATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 72 bp GGTCACAGGTTTGGACAGTCAGGGTGGTCAGTGGTCTaGTCACTGGAAGCACGGGGATGTGGCCTTGGCATC +
Preference number: 3 (lower is better)
Translates to: GHRFGQSGWSVV*SLEARGCGLGI
Trigger: GATGCCAAGGCCACATCCCCGTGCTTCCAGTGACCAGACCACTGACCACCCTGACTGTCCAAACCTGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp ACCCCACCAGGTGTGGTGCAGGAAGCAACAGAGGCCTaGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAG +
Preference number: 3 (lower is better)
Translates to: TPPGVVQEATEA*KSIHCVRNGAQ
Trigger: CTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACCTGGTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp TGCTCCACAGGCACTTTCTCCTCTTCCTCAAGGGCGTaGCGCAAGGTCTTCTCAACCCGCTGCAGCAGGAAG +
Preference number: 3 (lower is better)
Translates to: CSTGTFSSSSRA*RKVFSTRCSRK
Trigger: CTTCCTGCTGCAGCGGGTTGAGAAGACCTTGCGCCACGCCCTTGAGGAAGAGGAGAAAGTGCCTGTGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 72 bp GGGAACTTCTCTGACTCCAGCTGGTGCTGGATCCGATaGTATTCGCTGCGACTGGCTGGCATGAACTCGCCC +
Preference number: 3 (lower is better)
Translates to: GNFSDSSWCWIR*YSLRLAGMNSP
Trigger: GGGCGAGTTCATGCCAGCCAGTCGCAGCGAATACCATCGGATCCAGCACCAGCTGGAGTCAGAGAAGTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 72 bp AAGGGCCTCCCAATCTGCTCGATCAGCTCCCGTGCCTaGGTGATGATGTTGGCCCCTGTGAAGCAGACGATG +
Preference number: 3 (lower is better)
Translates to: KGLPICSISSRA*VMMLAPVKQTM
Trigger: CATCGTCTGCTTCACAGGGGCCAACATCATCACCCAGGCACGGGAGCTGATCGAGCAGATTGGGAGGCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 72 bp AAGATTTCCTGCCAGGGCACAGTCGGCGTGAGGTCCTaGGACTCCTCCTGGCTCTCCCAAAGAACTCGCTTC +
Preference number: 3 (lower is better)
Translates to: KISCQGTVGVRS*DSSWLSQRTRF
Trigger: GAAGCGAGTTCTTTGGGAGAGCCAGGAGGAGTCCCAGGACCTCACGCCGACTGTGCCCTGGCAGGAAATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp GGGGGAACTTCTCTGACTCCAGCTGGTGCTGGATCCGATGGTATTCGCTGCGACTCCAGGGCAGGGTTATaGAGCAGCAAGTGGGAACCG +
Preference number: 3 (lower is better)
Translates to: GGTSLTPAGAGSDGIRCDSRAGL*SSKWEP
Trigger: CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGA...GTCGCAGCGAATACCATCGGATCCAGCACCAGCTGGAGTCAGAGAAGTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp GCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCTGCTTTCTGGGAGTCTaGCAGTCCACAGTGAATACG +
Preference number: 3 (lower is better)
Translates to: APGSMALPVQDPIVDLVSCFLGV*QSTVNT
Trigger: CGTATTCACTGTGGACTGCAAGACTCCCAGAAAGCA...GCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp GGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACAATCCAGGGACAGCACCTaGCACACGTATTTGATGAAC +
Preference number: 3 (lower is better)
Translates to: GAAGPAAATSSCGTGARQSRDST*HTYLMN
Trigger: GTTCATCAAATACGTGTGCAAGGTGCTGTCCCTGGA...TTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp CTCGTCGGGCTCCATGGGAATAATGGTGCACAGAGCAAAGATGAATGGGTGGACATGCACTGGGGCGCCTaGTACTCCCCCTGGCTGTCC +
Preference number: 3 (lower is better)
Translates to: LVGLHGNNGAQSKDEWVDMHWGA*YSPWLS
Trigger: GGACAGCCAGGGGGAGTACAAGGCGCCCCAGTGCAT...GTCCACCCATTCATCTTTGCTCTGTGCACCATTATTCCCATGGAGCCCGACGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp GCTCAGCCTGATGCAGTGCAAGTCACTGCCAACGAGCGCCCACAGCCTGAACAGACCTTGCACACGTATTaGATGAACTCCAGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: AQPDAVQVTANERPQPEQTLHTY*MNSRAG
Trigger: CCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGT...CTGTTCAGGCTGTGGGCGCTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp CTGGGTGATGATGTTGGCCCCTGTGAAGCAGACGATGCCAGCCATCTCCATGGATTGGTCAGGATGATGTaGGGGTACATGGCCCCCACG +
Preference number: 3 (lower is better)
Translates to: LGDDVGPCEADDASHLHGLVRMM*GYMAPT
Trigger: CGTGGGGGCCATGTACCCCAACATCATCCTGACCAA...TCCATGGAGATGGCTGGCATCGTCTGCTTCACAGGGGCCAACATCATCACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp GCGATACGAAGCACCCTCCTCCGCTTTAGCGACTCGCTGGTTCACGTAGAACACTTGGTCAGGATGATGTaGGGGTACATGGCCCCCACG +
Preference number: 3 (lower is better)
Translates to: AIRSTLLRFSDSLVHVEHLVRMM*GYMAPT
Trigger: CGTGGGGGCCATGTACCCCAACATCATCCTGACCAA...GTGTTCTACGTGAACCAGCGAGTCGCTAAAGCGGAGGAGGGTGCTTCGTATCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp GGCACTGGCAGCCTGACCACCCGTGATCATGTCCTCCAGGGAGGCCTGCTGGATTTCTTTTTCCACACCTaGTGGAGCCCTTTGAACTCG +
Preference number: 3 (lower is better)
Translates to: GTGSLTTRDHVLQGGLLDFFFHT*WSPLNS
Trigger: CGAGTTCAAAGGGCTCCACAAGGTGTGGAAAAAGAA...ATCCAGCAGGCCTCCCTGGAGGACATGATCACGGGTGGTCAGGCTGCCAGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp CACTGGGTTCTTTACCTGCTGCAGGGCCGCAGGGATGGTGATGATCTTCTGGATAGTTCCCCGCGGCGTTaGACCTCAAAGCCCTTGAGC +
Preference number: 3 (lower is better)
Translates to: HWVLYLLQGRRDGDDLLDSSPRR*TSKPLS
Trigger: GCTCAAGGGCTTTGAGGTCAAACGCCGCGGGGAACT...ATCCAGAAGATCATCACCATCCCTGCGGCCCTGCAGCAGGTAAAGAACCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp TGTCTCATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCCGCATGTCCACAATGTaGTCCAACTGGTCAGCTATC +
Preference number: 3 (lower is better)
Translates to: CLIVAGRGTGSLTTRDHVRMSTM*SNWSAI
Trigger: GATAGCTGACCAGTTGGACAACATTGTGGACATGCG...GACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGATGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672742.1
3UTR-3UTR CAA 90 bp CTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCACAAATGGCCAGTCAAATCAGCATCAGGAAACTaGAGGGGCAGTTTGGTCGTC +
Preference number: 3 (lower is better)
Translates to: LHAQTVDCCPGLHKWPVKSASGN*RGSLVV
Trigger: GACGACCAAACTGCCCCTCAAGTTTCCTGATGCTGA...TTTGACTGGCCATTTGTGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672742.1
3UTR TCA 72 bp GGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTaGGGCTGTGGGGCCAGCCCATTTCTCCATGCAAAC +
Preference number: 3 (lower is better)
Translates to: GFLGKPAHKLLL*GCGASPFLHAN
Trigger: GTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR TCA 72 bp CCTCAACCACGCCCTCTGCAGCAGACCGACGGCTCCTaGCACCTAAGTGCTGATGCCTCACACATCATACTC +
Preference number: 3 (lower is better)
Translates to: PQPRPLQQTDGS*HLSADASHIIL
Trigger: GAGTATGATGTGTGAGGCATCAGCACTTAGGTGTCAGGAGCCGTCGGTCTGCTGCAGAGGGCGTGGTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR TCA 72 bp CGGGATCATAGCCTAGCTTGGCCTTGGCGGCCGCCTTaGGATTATGACTGCCCACAGGAAGGTAACTGTCCC +
Preference number: 3 (lower is better)
Translates to: RDHSLAWPWRPP*DYDCPQEGNCP
Trigger: GGGACAGTTACCTTCCTGTGGGCAGTCATAATCTCAAGGCGGCCGCCAAGGCCAAGCTAGGCTATGATCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR TCA 72 bp CCGAGAGCTTCTTTTTCCACACCTTGTGGAGCCCTTTaGACTCGTAACGCCTGTCCCGGAAGGCACGCACGG +
Preference number: 3 (lower is better)
Translates to: PRASFSTPCGAL*TRNACPGRHAR
Trigger: CCGTGCGTGCCTTCCGGGACAGGCGTTACGAGTTCAAAGGGCTCCACAAGGTGTGGAAAAAGAAGCTCTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR GCA 72 bp GCAGCAGCCACTCCAGGGTCTCCAGGAGGTACGACATaGCGTAGTGCTGGGCAATGTTCCGGAATATTCCGA +
Preference number: 3 (lower is better)
Translates to: AAATPGSPGGTT*RSAGQCSGIFR
Trigger: TCGGAATATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGGAGTGGCTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 72 bp CCAAAGAACTCGCTTCCTCTTCACAGTGACAGGGGCTaGTGGGTGAGGCAGCTTTACGAGGCCGAAGTCCTC +
Preference number: 3 (lower is better)
Translates to: PKNSLPLHSDRG*WVRQLYEAEVL
Trigger: GAGGACTTCGGCCTCGTAAAGCTGCCTCACCCAGCAGCCCCTGTCACTGTGAAGAGGAAGCGAGTTCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 72 bp GGGGATGAAGATCCCGAAGAGCGCTTTGTGGGCCTGTaGGTGGTGGTACAGGTAGATATGGCGGATACTCCC +
Preference number: 3 (lower is better)
Translates to: GDEDPEERFVGL*VVVQVDMADTP
Trigger: GGGAGTATCCGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAGCGCTCTTCGGGATCTTCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp GGGGAAACCAGCCCACAAACTGCTCCTGTGAGGCTGTaGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGA +
Preference number: 3 (lower is better)
Translates to: GETSPQTAPVRL*GQPISPCKQVR
Trigger: TCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGCAGTTTGTGGGCTGGTTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp CCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTaGTACACGGCCACGATGTACGCTGAAACAATCATG +
Preference number: 3 (lower is better)
Translates to: PGALRLSPSFMQ*YTATMYAETIM
Trigger: CATGATTGTTTCAGCGTACATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp TGCTGTACAGCACGTCCAGCCAGTAGTCAGCCACCTTaGCTACAGAGCCATACACCTCTTCCAGCGTGCTGC +
Preference number: 3 (lower is better)
Translates to: CCTARPASSQPP*LQSHTPLPACC
Trigger: GCAGCACGCTGGAAGAGGTGTATGGCTCTGTAGCCAAGGTGGCTGACTACTGGCTGGACGTGCTGTACAGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp CCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCACCTTCATATTCTGGCTaGGGGGTGAACTCAAAATCT +
Preference number: 3 (lower is better)
Translates to: PTRALGTRLVSEPNLREPPSYSG*GVNSKS
Trigger: AGATTTTGAGTTCACCCCCAAGCCAGAATATGAAGG...TGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672742.1
3UTR-3UTR CAA 90 bp CCTCCACGTTGGATTCCTCCGCCTCTTCCTCCTCCTCCCCATCTCTTTCCTCCTGCCTCATCGGGTTCATaGAAGACACAAAAGGGGCCT +
Preference number: 3 (lower is better)
Translates to: PPRWIPPPLPPPPHLFPPASSGS*KTQKGP
Trigger: AGGCCCCTTTTGTGTCTTCAATGAACCCGATGAGGC...AGGAGGAAAGAGATGGGGAGGAGGAGGAAGAGGCGGAGGAATCCAACGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537064.5
3UTR-3UTR CAA 90 bp GATCCCGAAGAGCGCTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGTCCTGCTCTTGCTTGTaGGGGAAGATGATGTTGGCG +
Preference number: 3 (lower is better)
Translates to: DPEERFVGLCVVVQVDMASCSCL*GKMMLA
Trigger: CGCCAACATCATCTTCCCCAACAAGCAAGAGCAGGA...CGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAGCGCTCTTCGGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp TGTCTCATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCTTCTTTTTCCACACCTaGTGGAGCCCTTTGAACTCG +
Preference number: 3 (lower is better)
Translates to: CLIVAGRGTGSLTTRDHVFFFHT*WSPLNS
Trigger: CGAGTTCAAAGGGCTCCACAAGGTGTGGAAAAAGAA...GACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGATGAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR GCA 72 bp TCCAGCTGGTCCTGTGTGGAGGTGAAGGACAAGGGCTaGAGTGAGCCAAAAGTGAGGTGCACAGAGGTCTTG +
Preference number: 3 (lower is better)
Translates to: SSWSCVEVKDKG*SEPKVRCTEVL
Trigger: CAAGACCTCTGTGCACCTCACTTTTGGCTCACTGCAGCCCTTGTCCTTCACCTCCACACAGGACCAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR GCA 72 bp TGCTTGTTGGGGAAGATGATGTTGGCGTGGAAGGCCTaGACCATCAGCAAGGCCTCACACAGAGTGCCAGAG +
Preference number: 3 (lower is better)
Translates to: CLLGKMMLAWKA*TISKASHRVPE
Trigger: CTCTGGCACTCTGTGTGAGGCCTTGCTGATGGTGCAGGCCTTCCACGCCAACATCATCTTCCCCAACAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 72 bp ACACAGCAAGCATTGCCCAGCATGAACCACCGCTGGTaGGTAATGCGAGTAGCTGCCCTCAACCATGCTCTC +
Preference number: 3 (lower is better)
Translates to: TQQALPSMNHRW*VMRVAALNHAL
Trigger: GAGAGCATGGTTGAGGGCAGCTACTCGCATTACCCACCAGCGGTGGTTCATGCTGGGCAATGCTTGCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR CCA 72 bp GGTACACAGCAAGCATTGCCCAGCATGAACCACCGCTaGTGGGTAATGCGAGTAGCTGCCCTCAACCATGCT +
Preference number: 3 (lower is better)
Translates to: GTQQALPSMNHR*WVMRVAALNHA
Trigger: AGCATGGTTGAGGGCAGCTACTCGCATTACCCACCAGCGGTGGTTCATGCTGGGCAATGCTTGCTGTGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR CCA 72 bp GCTTCTTCTGTAGAACTTCCACCAGCGTCATCTCGATaGCAGAGGAGTCGTAGGGCGCCTGACAGTTGGAGC +
Preference number: 3 (lower is better)
Translates to: ASSVELPPASSR*QRSRRAPDSWS
Trigger: GCTCCAACTGTCAGGCGCCCTACGACTCCTCTGCCATCGAGATGACGCTGGTGGAAGTTCTACAGAAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp GTGCTGCCCTTGAGGAAGGCCTCAAACACCGAGGATTaGAAGATCTTAATCAGCTGCAGTTCCCCGCGGCGT +
Preference number: 3 (lower is better)
Translates to: VLPLRKASNTED*KILISCSSPRR
Trigger: ACGCCGCGGGGAACTGCAGCTGATTAAGATCTTCCAATCCTCGGTGTTTGAGGCCTTCCTCAAGGGCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 72 bp GAAAGTGCTTCCTCACCGTGGGCTCTGCTTGGAAAATaGCAAGTGGGATGGCCCTGGGTAAGGAAGACAGGC +
Preference number: 3 (lower is better)
Translates to: ESASSPWALLGK*QVGWPWVRKTG
Trigger: GCCTGTCTTCCTTACCCAGGGCCATCCCACTTGCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 72 bp AAGAACTCGCTTCCTCTTCACAGTGACAGGGGCTGCTaGGTGAGGCAGCTTTACGAGGCCGAAGTCCTCCAT +
Preference number: 3 (lower is better)
Translates to: KNSLPLHSDRGC*VRQLYEAEVLH
Trigger: ATGGAGGACTTCGGCCTCGTAAAGCTGCCTCACCCAGCAGCCCCTGTCACTGTGAAGAGGAAGCGAGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp GGAGGTGGCGGGCAAAGAAGAGGTCGGAGCCGAATGTaGAGATGTCCTCTGGTAGGTTCCCAATGGGAATGT +
Preference number: 3 (lower is better)
Translates to: GGGGQRRGRSRM*RCPLVGSQWEC
Trigger: ACATTCCCATTGGGAACCTACCAGAGGACATCTCCACATTCGGCTCCGACCTCTTCTTTGCCCGCCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp CCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGTGTTCCTGGAGCTTCTTCATCATGTaGTGGAGTGTGCGGTGCAGG +
Preference number: 3 (lower is better)
Translates to: PSMSGADSSALISLMCSWSFFIM*WSVRCR
Trigger: CCTGCACCGCACACTCCACAACATGATGAAGAAGCT...CCAGGAACACATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp AGGTGCTCAAGAGCAAAGGTCTCTGCTTCCCAGCCTGAAAGGTGCCTCACCAGCAGTAAATCCTCCACGTaGGATTCCTCCGCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: RCSRAKVSASQPERCLTSSKSST*DSSASS
Trigger: GGAAGAGGCGGAGGAATCCAACGTGGAGGATTTACT...GCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAGACCTTTGCTCTTGAGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp TCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTAGTCCCAATCCAGAATaGCTCGAATATCAAAGTCTT +
Preference number: 3 (lower is better)
Translates to: SSRGCSLEHCASARPSCSSPNPE*LEYQSL
Trigger: AAGACTTTGATATTCGAGCAATTCTGGATTGGGACT...ACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR TCA 72 bp CAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTaGGAGCTCAGTGGAGTTCCGAGAGCCTGTGACTTT +
Preference number: 3 (lower is better)
Translates to: QQVGTGEDRKHL*ELSGVPRACDF
Trigger: AAAGTCACAGGCTCTCGGAACTCCACTGAGCTCTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 72 bp CCTCCTTGTAGGCGAGCAGGAATCGCTGGATGGCTCTaGAGATGGTCTTCAGGTCAGTTTCTGCCCGAACTT +
Preference number: 3 (lower is better)
Translates to: PPCRRAGIAGWL*RWSSGQFLPEL
Trigger: AAGTTCGGGCAGAAACTGACCTGAAGACCATCTGCAGAGCCATCCAGCGATTCCTGCTCGCCTACAAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp AGGCCGGACCCCCACAGTGGTAAAGACAATAGACTATaGAAAACTCGCCACACAGTGGTCTCTGGCTCTGCC +
Preference number: 3 (lower is better)
Translates to: RPDPHSGKDNRL*KTRHTVVSGSA
Trigger: GGCAGAGCCAGAGACCACTGTGTGGCGAGTTTTCCATAGTCTATTGTCTTTACCACTGTGGGGGTCCGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR CCA 72 bp TGTAGGCGAGCAGGAATCGCTGGATGGCTCTGCAGATaGTCTTCAGGTCAGTTTCTGCCCGAACTTCGAAGG +
Preference number: 3 (lower is better)
Translates to: CRRAGIAGWLCR*SSGQFLPELRR
Trigger: CCTTCGAAGTTCGGGCAGAAACTGACCTGAAGACCATCTGCAGAGCCATCCAGCGATTCCTGCTCGCCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp CCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGTGAGCTTCTTCATCATGTaGTGGAGTGTGCGGTGCAGG +
Preference number: 3 (lower is better)
Translates to: PTSTRRSRSRFSLFTWFVSFFIM*WSVRCR
Trigger: CCTGCACCGCACACTCCACAACATGATGAAGAAGCT...CACAAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp ATGGCATCTTCCACACGGCGCTTCTTTGTACAGAGGATGATGCGGTTGAAGTTGGATGACCCCAGGCGCTaGAACTCAGCGATGAGCTGC +
Preference number: 3 (lower is better)
Translates to: MASSTRRFFVQRMMRLKLDDPRR*NSAMSC
Trigger: GCAGCTCATCGCTGAGTTCAAGCGCCTGGGGTCATC...CAACTTCAACCGCATCATCCTCTGTACAAAGAAGCGCCGTGTGGAAGATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp GGGGGAACTTCTCTGACTCCAGCTGGTGCTGGATCCGATGGTATTCGCTGCGACTTCAAAGTTGGTGACTaGCTCCACAGGCACTTTCTC +
Preference number: 3 (lower is better)
Translates to: GGTSLTPAGAGSDGIRCDFKVGD*LHRHFL
Trigger: GAGAAAGTGCCTGTGGAGCAAGTCACCAACTTTGAA...GTCGCAGCGAATACCATCGGATCCAGCACCAGCTGGAGTCAGAGAAGTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp TCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTCACACCTCTTCAAAGTaGGTGACTTGCTCCACAGGC +
Preference number: 3 (lower is better)
Translates to: SPTSTRRSRSRFSLFTWFHTSSK*VTCSTG
Trigger: GCCTGTGGAGCAAGTCACCAACTTTGAAGAGGTGTG...AAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp GCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCCACACAGATAGGCACTTTGCTCCAGGCTTATaGAAGTCACAGGCAGCACAG +
Preference number: 3 (lower is better)
Translates to: ALPVQDPIVDLVSHTDRHFAPGL*KSQAAQ
Trigger: CTGTGCTGCCTGTGACTTCAATAAGCCTGGAGCAAA...GTGCCTATCTGTGTGGCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCTTTTCTGGGAAGCTGTaGGGCAGGACGCACCATATA +
Preference number: 3 (lower is better)
Translates to: VQEATEAWKSIHCVRNGAFSGKL*GRTHHI
Trigger: TATATGGTGCGTCCTGCCCAACAGCTTCCCAGAAAA...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp AAGACCTGGGTGTGGATGGTGAGGGCGAAGTCTCCCGCGCAGCTGCAGTACACATTGGTGAAGCCTTCCTaGACCATGATGTTCAACATG +
Preference number: 3 (lower is better)
Translates to: KTWVWMVRAKSPAQLQYTLVKPS*TMMFNM
Trigger: CATGTTGAACATCATGGTCAAGGAAGGCTTCACCAA...TGTGTACTGCAGCTGCGCGGGAGACTTCGCCCTCACCATCCACACCCAGGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp CCACCAGCGTCATCTCGATGGCAGAGGAGTCGTAGGGCGCCTGACAGTTGGAGCATGTCTACATGTTCCTaGCTGAGTAACACACAGAAG +
Preference number: 3 (lower is better)
Translates to: PPASSRWQRSRRAPDSWSMSTCS*LSNTQK
Trigger: CTTCTGTGTGTTACTCAGCAAGGAACATGTAGACAT...GCTCCAACTGTCAGGCGCCCTACGACTCCTCTGCCATCGAGATGACGCTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR TCA 72 bp CTGGTCCTGTGTGGAGGTGAAGGACAAGGGCTGCAGTaGGCCAAAAGTGAGGTGCACAGAGGTCTTGTTTTC +
Preference number: 3 (lower is better)
Translates to: LVLCGGEGQGLQ*AKSEVHRGLVF
Trigger: GAAAACAAGACCTCTGTGCACCTCACTTTTGGCTCACTGCAGCCCTTGTCCTTCACCTCCACACAGGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR TCA 72 bp CTACAGAGCCATACACCTCTTCCAGCGTGCTGCCCTTaGGGAAGGCCTCAAACACCGAGGATTGGAAGATCT +
Preference number: 3 (lower is better)
Translates to: LQSHTPLPACCP*GRPQTPRIGRS
Trigger: AGATCTTCCAATCCTCGGTGTTTGAGGCCTTCCTCAAGGGCAGCACGCTGGAAGAGGTGTATGGCTCTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR GCA 72 bp AGCACGTGTCCGTCGTCCGTCAGCTTATTGAACTCCTaGTCTTGCTTGTTGGGGAAGATGATGTTGGCGTGG +
Preference number: 3 (lower is better)
Translates to: STCPSSVSLLNS*SCLLGKMMLAW
Trigger: CCACGCCAACATCATCTTCCCCAACAAGCAAGAGCAGGAGTTCAATAAGCTGACGGACGACGGACACGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR GCA 72 bp GCCTCAAACACCGAGGATTGGAAGATCTTAATCAGCTaGAGTTCCCCGCGGCGTTTGACCTCAAAGCCCTTG +
Preference number: 3 (lower is better)
Translates to: ASNTEDWKILIS*SSPRRLTSKPL
Trigger: CAAGGGCTTTGAGGTCAAACGCCGCGGGGAACTGCAGCTGATTAAGATCTTCCAATCCTCGGTGTTTGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 72 bp TTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTaGGAACCGGGGAGGACAGGAAACATCTCTGAGAGC +
Preference number: 3 (lower is better)
Translates to: LMNSRAGLLSSK*EPGRTGNISES
Trigger: GCTCTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp ACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTaGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTG +
Preference number: 3 (lower is better)
Translates to: TRRSRSRFSLFT*FVMLVSRDSTL
Trigger: CAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp TTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTGCTTaGAAAATGGCAAGTGGGATGGCCACTATGATCCAC +
Preference number: 3 (lower is better)
Translates to: FRRKCFLTVGSA*KMASGMATMIH
Trigger: GTGGATCATAGTGGCCATCCCACTTGCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672002.1
3UTR-3UTR CAA 90 bp CCTTGTAGGCGAGCAGGAATCGCTGGATGGCTCTGCAGATGGTCTTCAGGTCAGTGGTGCCCTGTGAAATaGGCCTTTCTTCTTTCTGCT +
Preference number: 3 (lower is better)
Translates to: PCRRAGIAGWLCRWSSGQWCPVK*AFLLSA
Trigger: AGCAGAAAGAAGAAAGGCCAATTTCACAGGGCACCA...CTGACCTGAAGACCATCTGCAGAGCCATCCAGCGATTCCTGCTCGCCTACAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp ACTCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTCAAAGTTGGTGACTaGCTCCACAGGCACTTTCTC +
Preference number: 3 (lower is better)
Translates to: TRRHPPGEAGLGSAYSPGFKVGD*LHRHFL
Trigger: GAGAAAGTGCCTGTGGAGCAAGTCACCAACTTTGAA...ACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp CCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGTGTTCCTGGTTCAGGGAGGCAAGCTaGCTCTTAATCTCATCACAC +
Preference number: 3 (lower is better)
Translates to: PSMSGADSSALISLMCSWFREAS*LLISSH
Trigger: GTGTGATGAGATTAAGAGCAAGCTTGCCTCCCTGAA...CCAGGAACACATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp CCTGAACTGTTGATCTCAACAGTGGCTTGGTCATCGAACTCCATGACAAGACAGTCCAGCGTGCTGCCCTaGAGGAAGGCCTCAAACACC +
Preference number: 3 (lower is better)
Translates to: PELLISTVAWSSNSMTRQSSVLP*RKASNT
Trigger: GGTGTTTGAGGCCTTCCTCAAGGGCAGCACGCTGGA...CTGTCTTGTCATGGAGTTCGATGACCAAGCCACTGTTGAGATCAACAGTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp CCTGAACTGTTGATCTCAACAGTGGCTTGGTCATCGAACTCCATGACAAGACAGGGCATGTTGGCTGCCTaGCTGTACAGCACGTCCAGC +
Preference number: 3 (lower is better)
Translates to: PELLISTVAWSSNSMTRQGMLAA*LYSTSS
Trigger: GCTGGACGTGCTGTACAGCAAGGCAGCCAACATGCC...CTGTCTTGTCATGGAGTTCGATGACCAAGCCACTGTTGAGATCAACAGTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp GTACAGCACGTCCAGCCAGTAGTCAGCCACCTTGGCTACAGAGCCATACACCTCGTGTTCAAACCACCTTaGGATCAGATGAGCCTCCTT +
Preference number: 3 (lower is better)
Translates to: VQHVQPVVSHLGYRAIHLVFKPP*DQMSLL
Trigger: AAGGAGGCTCATCTGATCCAAAGGTGGTTTGAACAC...GAGGTGTATGGCTCTGTAGCCAAGGTGGCTGACTACTGGCTGGACGTGCTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672742.1
3UTR TCA 72 bp TCACCTGGTTGTCTGCATAGATGTTGTGGTACTGGGTaGTCTCCTTCACCCAGCCCACGACCATGCTCTTCA +
Preference number: 3 (lower is better)
Translates to: SPGCLHRCCGTG*SPSPSPRPCSS
Trigger: TGAAGAGCATGGTCGTGGGCTGGGTGAAGGAGATCACCCAGTACCACAACATCTATGCAGACAACCAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR TCA 72 bp GAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGTaGTGTTGGTGTCCAGGGACAGCACCTTGCACACGT +
Preference number: 3 (lower is better)
Translates to: EAGLGSAYSPGL*CWCPGTAPCTR
Trigger: ACGTGTGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAACCGAGACCTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR TCA 72 bp GTACTTCATGTACAGGTAGTAAGTGGCGACAGCATCTaGCACAGAATACGTGGCCAGAGTCTGGGGCTGCTC +
Preference number: 3 (lower is better)
Translates to: VLHVQVVSGDSI*HRIRGQSLGLL
Trigger: GAGCAGCCCCAGACTCTGGCCACGTATTCTGTGTCAGATGCTGTCGCCACTTACTACCTGTACATGAAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR TCA 72 bp CTTCCAGCTTCCGAGACATGGAACGGTTCTCAGAGATaGGCTCGAATAGCTCAGAGTCAGGCATGTTGGCTG +
Preference number: 3 (lower is better)
Translates to: LPASETWNGSQR*ARIAQSQACWL
Trigger: CAGCCAACATGCCTGACTCTGAGCTATTCGAGCTCATCTCTGAGAACCGTTCCATGTCTCGGAAGCTGGAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR TCA 72 bp AACCTGAGTCTCATATACGCCCTCGATGTCTGGCGCTaGCAGCTCAGCGTTGATCTCGTTGATGTGTTCCTG +
Preference number: 3 (lower is better)
Translates to: NLSLIYALDVWR*QLSVDLVDVFL
Trigger: CAGGAACACATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGGCGTATATGAGACTCAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR TCA 72 bp CAGGTGCTCAAGAGCAAAGGTCTCTGCTTCCCAGCCTaGAAGGTGCCTCACCAGCTGTTTATTGACCACACA +
Preference number: 3 (lower is better)
Translates to: QVLKSKGLCFPA*KVPHQLFIDHT
Trigger: TGTGTGGTCAATAAACAGCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAGACCTTTGCTCTTGAGCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 72 bp CCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTaGATAGATGTTGTGGTACTGGGTGATCTCCTTCAC +
Preference number: 3 (lower is better)
Translates to: PKPAVEVHHLVV*IDVVVLGDLLH
Trigger: GTGAAGGAGATCACCCAGTACCACAACATCTATGCAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 72 bp CCATTTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTaGTTGGAAAATGGCAAGTGGGATGGCCACTATGAT +
Preference number: 3 (lower is better)
Translates to: PFPEKVLPHRGL*LENGKWDGHYD
Trigger: ATCATAGTGGCCATCCCACTTGCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672002.1
3UTR CCA 72 bp AAACAAAGTGTAGCAGCGATGGCCTCAGACAGTAGATaGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAG +
Preference number: 3 (lower is better)
Translates to: KQSVAAMASDSR*QGQTKAGSGPK
Trigger: CTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGCCATCGCTGCTACACTTTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp CATTGTACCAATGAGCCACGTGGATCTTCAGGTCAATaGAGAGGCGGATGTGGTAGGGAACATCGTACTCGC +
Preference number: 3 (lower is better)
Translates to: HCTNEPRGSSGQ*RGGCGREHRTR
Trigger: GCGAGTACGATGTTCCCTACCACATCCGCCTCTCCATTGACCTGAAGATCCACGTGGCTCATTGGTACAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672742.1
3UTR-3UTR CAA 90 bp GCTGATGGACGTAGACTTCTGCTCCCCGTAATCTTCCAGCTTCCGAGACATGGATCCAGGGACAGCACCTaGCACACGTATTTGATGAAC +
Preference number: 3 (lower is better)
Translates to: ADGRRLLLPVIFQLPRHGSRDST*HTYLMN
Trigger: GTTCATCAAATACGTGTGCAAGGTGCTGTCCCTGGA...TCCATGTCTCGGAAGCTGGAAGATTACGGGGAGCAGAAGTCTACGTCCATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp AGGTGCTCAAGAGCAAAGGTCTCTGCTTCCCAGCCTGAAAGGTGCCTCACCAGCAGAGAACCGTCTTCATaGAACACAGCATACCTCTTC +
Preference number: 3 (lower is better)
Translates to: RCSRAKVSASQPERCLTSREPSS*NTAYLF
Trigger: GAAGAGGTATGCTGTGTTCAATGAAGACGGTTCTCT...GCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAGACCTTTGCTCTTGAGCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp AAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTCACGGGGATGTGGCCTaGGCATCAGGAGGCCTGGCA +
Preference number: 3 (lower is better)
Translates to: KKFPASRERNCQRMEGLLHGDVA*ASGGLA
Trigger: TGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG...AAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp TCGGTTCAGCTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTAGTAAATCCTCCACGTaGGATTCCTCCGCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: SVQLIHLVCDVGVQGQHLSKSST*DSSASS
Trigger: GGAAGAGGCGGAGGAATCCAACGTGGAGGATTTACT...AAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAACCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR TCA 72 bp CACATCATACTCAGTAGAGCTGGCTGGAGATCCCTGTaGTGTACCTTTGGTCACATCGAAAAGTGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: HIILSRAGWRSL*CTFGHIEKWPW
Trigger: CCAGGGCCACTTTTCGATGTGACCAAAGGTACATCACAGGGATCTCCAGCCAGCTCTACTGAGTATGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR CCA 72 bp ACGACCATGCTCTTCAGGATCCCTTCCATTCATTTGTaGTATGACCACAAAGGCAGCCCCTCTGACCTCAGT +
Preference number: 3 (lower is better)
Translates to: TTMLFRIPSIHL*YDHKGSPSDLS
Trigger: ACTGAGGTCAGAGGGGCTGCCTTTGTGGTCATACCACAAATGAATGGAAGGGATCCTGAAGAGCATGGTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR-3UTR CAA 90 bp TGCAGGGTGAAGGCCATCAGCTTCTTCTGTAGAACTTCCACCAGCGTCATCTCGCCTTCATATTCTGGCTaGGGGGTGAACTCAAAATCT +
Preference number: 3 (lower is better)
Translates to: CRVKAISFFCRTSTSVISPSYSG*GVNSKS
Trigger: AGATTTTGAGTTCACCCCCAAGCCAGAATATGAAGG...CGAGATGACGCTGGTGGAAGTTCTACAGAAGAAGCTGATGGCCTTCACCCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp ATATACCATCTGTGTCCAGCTCTAAGGGCCTCCCAATCTGCTCGATCAGCTCCCTTGGTGAAGCCTTCCTaGACCATGATGTTCAACATG +
Preference number: 3 (lower is better)
Translates to: IYHLCPALRASQSARSAPLVKPS*TMMFNM
Trigger: CATGTTGAACATCATGGTCAAGGAAGGCTTCACCAA...GGGAGCTGATCGAGCAGATTGGGAGGCCCTTAGAGCTGGACACAGATGGTATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp GAAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTAGTTCCCCGCGGCGTTaGACCTCAAAGCCCTTGAGC +
Preference number: 3 (lower is better)
Translates to: EEIPSIERKKLSENGRSPSSPRR*TSKPLS
Trigger: GCTCAAGGGCTTTGAGGTCAAACGCCGCGGGGAACT...AGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR TCA 72 bp AAGGTCCAGCTCCACACACACTGTGGAGTAACAGCCTaGACTGTTGATCTCAACAGTGGCTTGGTCATCGAA +
Preference number: 3 (lower is better)
Translates to: KVQLHTHCGVTA*TVDLNSGLVIE
Trigger: TTCGATGACCAAGCCACTGTTGAGATCAACAGTTCAGGCTGTTACTCCACAGTGTGTGTGGAGCTGGACCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp GAAGCCTTCCTTGACCATGATGTTCAACATGGCGCCTaGGTAGGAGATGGTCACTTTGGGCTTCTTCACATT +
Preference number: 3 (lower is better)
Translates to: EAFLDHDVQHGA*VGDGHFGLLHI
Trigger: AATGTGAAGAAGCCCAAAGTGACCATCTCCTACCCAGGCGCCATGTTGAACATCATGGTCAAGGAAGGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR TCA 72 bp ACCACCTTTGGATCAGATGAGCCTCATCGGGTTCATTaGAGACACAAAAGGGGCCTTCATATTCTGGCTTGG +
Preference number: 3 (lower is better)
Translates to: TTFGSDEPHRVH*RHKRGLHILAW
Trigger: CCAAGCCAGAATATGAAGGCCCCTTTTGTGTCTTCAATGAACCCGATGAGGCTCATCTGATCCAAAGGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537064.5
3UTR TCA 72 bp TTGCTCGAATATCAAAGTCTTGAAGGGAAGAGCTCTTaGGCCATTTCCGGAGAAAGTGCTTCCTCACCGTGG +
Preference number: 3 (lower is better)
Translates to: LLEYQSLEGKSS*AISGESASSPW
Trigger: CCACGGTGAGGAAGCACTTTCTCCGGAAATGGCTCAAGAGCTCTTCCCTTCAAGACTTTGATATTCGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR GCA 72 bp TTAATCTCATCACACACCTCTTCAAAGTTGGTGACTTaGTCCACAGGCACTTTCTCCTCTTCCTCAAGGGCG +
Preference number: 3 (lower is better)
Translates to: LISSHTSSKLVT*STGTFSSSSRA
Trigger: CGCCCTTGAGGAAGAGGAGAAAGTGCCTGTGGAGCAAGTCACCAACTTTGAAGAGGTGTGTGATGAGATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 72 bp CTGGCACTGAATACTCATAGAGATTGTAGACCATGTTaGAGCGAGGAAGGACCCGATTTACCTTGCGATACG +
Preference number: 3 (lower is better)
Translates to: LALNTHRDCRPC*SEEGPDLPCDT
Trigger: CGTATCGCAAGGTAAATCGGGTCCTTCCTCGCTCCAACATGGTCTACAATCTCTATGAGTATTCAGTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CCA 72 bp ATAGTTGATCTTGTCAGCCACACAGATAGGCACCAGTaGGAATTCCTCCAAGACAGGAATTTCACTGGCCAG +
Preference number: 3 (lower is better)
Translates to: IVDLVSHTDRHQ*EFLQDRNFTGQ
Trigger: CTGGCCAGTGAAATTCCTGTCTTGGAGGAATTCCCACTGGTGCCTATCTGTGTGGCTGACAAGATCAACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR-3UTR CAA 90 bp TTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCTTCTTCAATACCTTGCACACGTATTaGATGAACTCCAGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: LSSAREPSSLNTAYLFFNTLHTY*MNSRAG
Trigger: CCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGT...ATTGAAGAAGAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp TTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCTTCTTCAATACCTCATCGGGTTCATaGAAGACACAAAAGGGGCCT +
Preference number: 3 (lower is better)
Translates to: LSSAREPSSLNTAYLFFNTSSGS*KTQKGP
Trigger: AGGCCCCTTTTGTGTCTTCAATGAACCCGATGAGGT...ATTGAAGAAGAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672742.1
3UTR CCA 72 bp GTAAAGACAATAGACTATGGAAAACTCGCCACACAGTaGTCTCTGGCTCTGCCATTAAGACTAAGGGAAGCC +
Preference number: 3 (lower is better)
Translates to: VKTIDYGKLATQ*SLALPLRLREA
Trigger: GGCTTCCCTTAGTCTTAATGGCAGAGCCAGAGACCACTGTGTGGCGAGTTTTCCATAGTCTATTGTCTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR CCA 72 bp CTCCATGGGAATAATGGTGCACAGAGCAAAGATGAATaGGTGGACGTACTTCATGTACAGGTAGTAAGTGGC +
Preference number: 3 (lower is better)
Translates to: LHGNNGAQSKDE*VDVLHVQVVSG
Trigger: GCCACTTACTACCTGTACATGAAGTACGTCCACCCATTCATCTTTGCTCTGTGCACCATTATTCCCATGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR-3UTR CAA 90 bp ATAACCATGTCTACATGTTCCTTGCTGAGTAACACACAGAAGACTCAGGCTGCTGTGTTCAAACCACCTTaGGATCAGATGAGCCTCATC +
Preference number: 3 (lower is better)
Translates to: ITMSTCSLLSNTQKTQAAVFKPP*DQMSLI
Trigger: GATGAGGCTCATCTGATCCAAAGGTGGTTTGAACAC...AGCAGCCTGAGTCTTCTGTGTGTTACTCAGCAAGGAACATGTAGACATGGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537064.5
3UTR-3UTR CAA 90 bp AGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTTCACACCTCTTCAAAGTaGGTGACTTGCTCCACAGGC +
Preference number: 3 (lower is better)
Translates to: RNSQHREKEIVREWKVSFHTSSK*VTCSTG
Trigger: GCCTGTGGAGCAAGTCACCAACTTTGAAGAGGTGTG...AAAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR TCA 72 bp AGATGGTCACTTTGGGCTTCTTCACATTGGTCGTCTTaGAGACAAAATTTTCTGGGAAGCTGTTGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: RWSLWASSHWSS*RQNFLGSCWAG
Trigger: TCCTGCCCAACAGCTTCCCAGAAAATTTTGTCTTCAAGACGACCAATGTGAAGAAGCCCAAAGTGACCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CCA 72 bp ACATCGTACTCGCGCATGTCCACAATGTTGTCCAACTaGTCAGCTATCTTCTTAGAGGTTTCCTCTTCATCA +
Preference number: 3 (lower is better)
Translates to: TSYSRMSTMLSN*SAIFLEVSSSS
Trigger: TGATGAAGAGGAAACCTCTAAGAAGATAGCTGACCAGTTGGACAACATTGTGGACATGCGCGAGTACGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672742.1
3UTR-3UTR CAA 90 bp AGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTTAGAGAACCGTCTTCATaGAACACAGCATACCTCTTC +
Preference number: 3 (lower is better)
Translates to: RNSQHREKEIVREWKVSFREPSS*NTAYLF
Trigger: GAAGAGGTATGCTGTGTTCAATGAAGACGGTTCTCT...AAAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp ACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGGCCGACTCCAGACGCTaGCTCTTCCTGCGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: TGMWPWHQEAWHGRRGTRADSRR*LFLRAR
Trigger: CCTCGCCCGCAGGAAGAGGCAGCGTCTGGAGTCGGC...CCGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGAGGGCACAGTCGGCGTaGGGTCCTGGGACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HGDVALASGGLARTQRHPRAQSA*GPGTPP
Trigger: AGGAGGAGTCCCAGGACCTCACGCCGACTGTGCCCT...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCCTCCAGGACGCTGCCTCTTCCTaGGGGCGAGGCGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: IVAGRGTGSLTTRDHVLQDAASS*GRGAAG
Trigger: CCCGGCAGCGCCTCGCCCGCAGGAAGAGGCAGCGTC...CTGGAGGACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGCCGACTCCAGACGCTaGCTCTTCCTGCGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: PPHGGAPWSTAPQPVLHAADSRR*LFLRAR
Trigger: CCTCGCCCGCAGGAAGAGGCAGCGTCTGGAGTCGGC...TGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGCCATTCCTCCTGGCTaGTTCCCAGGGCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: HGDVALASGGLARTQRHPAIPPG*FPGREA
Trigger: AGCCTCCCGCCCTGGGAACCAGCCAGGAGGAATGGC...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AGGGCGGGAGGCTGCCCCAAGATTTCCTGCCAGGGCACAGTCGGCGTGAGGTCCAAGACACGAGCCTCCTaGGGAGCCTGTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: RAGGCPKISCQGTVGVRSKTRAS*GACGAP
Trigger: GGGGGCCCCACAGGCTCCCCAGGAGGCTCGTGTCTT...GGACCTCACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCAGCCTCCCGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGCCTCGGACTGTCTTCTaGGGCCTCGGCCATCGTGAC +
Preference number: 4 (lower is better)
Translates to: HGDVALASGGLARTQRHPPRTVF*GLGHRD
Trigger: GTCACGATGGCCGAGGCCTCAGAAGACAGTCCGAGG...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGCCCCCTCCCTCCTGTaGGGCTCTCGTCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: SSRGCSLEHCASARPSCSAPSLL*GSRLGC
Trigger: ACACCCCAGACGAGAGCCTCACAGGAGGGAGGGGGC...ACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GGCATGAACTCGCCCCTCCACTGCCAGGCCATCTTCCGCTGGCAGTTTGCTCCAGACGCTGCCTCTTCCTaGGGGCGAGGCGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: GMNSPLHCQAIFRWQFAPDAASS*GRGAAG
Trigger: CCCGGCAGCGCCTCGCCCGCAGGAAGAGGCAGCGTC...TGGAGCAAACTGCCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGTTCATGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CGAGGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGAGCCGACTCCAGACGCTaGCTCTTCCTGCGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: RGAAGPAAATSSCGTGARADSRR*LFLRAR
Trigger: CCTCGCCCGCAGGAAGAGGCAGCGTCTGGAGTCGGC...TCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGGGTAGTGACGGATCATaGGCCGGGCTCCATGGCGCT +
Preference number: 4 (lower is better)
Translates to: TGMWPWHQEAWHGRRGTRGSDGS*AGLHGA
Trigger: AGCGCCATGGAGCCCGGCGCATGATCCGTCACTACC...CCGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGCTCAACCACGCCCTCTaGAGCAGACCGACGGCTCCT +
Preference number: 4 (lower is better)
Translates to: HGDVALASGGLARTQRHPLNHAL*SRPTAP
Trigger: AGGAGCCGTCGGTCTGCTGCAGAGGGCGTGGTTGAG...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR CCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCGTCGGCGTGAGGTCCTaGGACTCCTCCTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGVGVRS*DSSWLS
Trigger: GGAGAGCCAGGAGGAGTCCCAGGACCTCACGCCGAC...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCTCCGGGTCTAGCTCCACGGGATCATAGCCTAGCTTGGCCTTGGCGGCCGCCTATGCGCCGGGCTCCATaGCGCTGCCAGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: PPGLAPRDHSLAWPWRPPMRRAP*RCQSRT
Trigger: GGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCAT...AGGCGGCCGCCAAGGCCAAGCTAGGCTATGATCCCGTGGAGCTAGACCCGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGACAGCCAGAGCAGGTaGTTGTGGCGCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HGDVALASGGLARTQRHPDSQSR*LWRWRW
Trigger: CCACCTCCAGCGCCACAACCACCTGCTCTGGCTGTC...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCACACGGGGGTGCTCCCTaGAGCACTGCGCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: PTRALGTRLVSEPNLREPHGGAP*STAPQP
Trigger: GGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTG...TGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCCTCCAGCACGGGGGTGCTCCCTaGAGCACTGCGCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: IVAGRGTGSLTTRDHVLQHGGAP*STAPQP
Trigger: GGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTG...CTGGAGGACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGGCGGTTGGTCAGGATaGTGTTGGGGTACATGGCCC +
Preference number: 4 (lower is better)
Translates to: HGDVALASGGLARTQRHPGGWSG*CWGTWP
Trigger: GGGCCATGTACCCCAACATCATCCTGACCAACCGCC...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCGGGCTTGCGGGAGATaGTGTAGCGGCAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGRACGR*CSGNSA
Trigger: GGCTGAGTTGCCGCTACATCATCTCCCGCAAGCCCG...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGCTGGTTCCAGGTAGCTaGACTGGGCCAGAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: TGMWPWHQEAWHGRRGTRLVPGS*TGPESA
Trigger: TGCGCTCTCTGGCCCAGTTCAGCTACCTGGAACCAG...CCGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AAGGTGATCATTCCGGGAAGGGCTCCGACCGCCCCCTCGGCCTCCTGGGAGAGCGGATCACGTCGAAGCTaGTCCCCATGCTGTCGGCCC +
Preference number: 4 (lower is better)
Translates to: KVIIPGRAPTAPSASWESGSRRS*SPCCRP
Trigger: GGGCCGACAGCATGGGGATCAGCTTCGACGTGATCC...GCTCTCCCAGGAGGCCGAGGGGGCGGTCGGAGCCCTTCCCGGAATGATCACCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCTGATGCAGTGCAAGTCACTGCCAACGAGCGCCCACAGCCTGAACAGGCCGGCCCTGGGTGTGGATGGTaGGGGCGAAGTCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: PDAVQVTANERPQPEQAGPGCGW*GRSLPR
Trigger: GCGCGGGAGACTTCGCCCTCACCATCCACACCCAGG...GCCGGCCTGTTCAGGCTGTGGGCGCTCGTTGGCAGTGACTTGCACTGCATCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGCCCCCTCCCTCCTGTaGGGCTCTCGTCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: PTRALGTRLVSEPNLREPAPSLL*GSRLGC
Trigger: ACACCCCAGACGAGAGCCTCACAGGAGGGAGGGGGC...TGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTCTGACTTCCTCTCCGTaGCAGGGGAGCCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: SSRGCSLEHCASARPSCSLTSSP*QGSPRA
Trigger: AGCCCGAGGGCTCCCCTGTCACGGAGAGGAAGTCAG...ACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672002.1
CDS-3UTR GCA 90 bp ACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGTGCAGTGCAAGTCACTaGCAACGAGCGCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: TGMWPWHQEAWHGRRGTRCSASH*QRAPTA
Trigger: GGCTGTGGGCGCTCGTTGGCAGTGACTTGCACTGCA...CCGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCCGCCATCATCCCTGCTaGCCTCGCCATCCGCGCCTG +
Preference number: 4 (lower is better)
Translates to: APGSMALPVQDPIVDLVSRHHPC*PRHPRL
Trigger: CAGGCGCGGATGGCGAGGCCAGCAGGGATGATGGCG...GCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCTGCATGCTCAGACCGTaGACTGCTGCCCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLCMLRP*TAARAS
Trigger: GGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCA...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCATGGCTTCGTCCACCATaGCAGAGGGCTGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: GHSQPRSRPASSGALARPWLRPP*QRAAGG
Trigger: ACCGCCTGCAGCCCTCTGCCATGGTGGACGAAGCCA...TGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGCTGTCTCATCGTAGCTaGCCGGGGCACTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ALAASLTACFFRCSGEARLSHRS*PGHWQP
Trigger: AGGCTGCCAGTGCCCCGGCCAGCTACGATGAGACAG...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTCCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCCCTCTTCACCCACCTaGGGCAGTCCATGTGGATGC +
Preference number: 4 (lower is better)
Translates to: LLLTGVLPGALRLSPSFMPSSPT*GSPCGC
Trigger: GCATCCACATGGACTGCCTCAGGTGGGTGAAGAGGG...CATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACCCAGCGTGCTGCCCTTaGGGAAGGCCTCAAACACCG +
Preference number: 4 (lower is better)
Translates to: APWSTAPQPVLHAVVHGHPACCP*GRPQTP
Trigger: CGGTGTTTGAGGCCTTCCTCAAGGGCAGCACGCTGG...GTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CGAGGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACCAGCGTGCTGCCCTTaGGGAAGGCCTCAAACACCG +
Preference number: 4 (lower is better)
Translates to: RGAAGPAAATSSCGTGARPACCP*GRPQTP
Trigger: CGGTGTTTGAGGCCTTCCTCAAGGGCAGCACGCTGG...TCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGTCAGCCCTGCATCCTTaGCCATCTGGTCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: HGDVALASGGLARTQRHPSALHP*PSGLPG
Trigger: TCCTGGGAGACCAGATGGTCAAGGATGCAGGGCTGA...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGGCCAGTCGGGGTGTTTaGCACGTGGCACTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: HSQPRSRPASSGALARPGASRGV*HVALGS
Trigger: AGAACCCAGTGCCACGTGTCAAACACCCCGACTGGC...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTCCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGGCTTCCTCTTCACAGTaGCAGGGGCTGCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LLLTGVLPGALRLSPSFMASSSQ*QGLLGE
Trigger: CTCACCCAGCAGCCCCTGTCACTGTGAAGAGGAAGC...CATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTGCAGCAGCCACTCCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCAGGGCACAGTCGGCGTaGGGTCCTGGGACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LQQPLQGLQEVRHAVVLGRAQSA*GPGTPP
Trigger: AGGAGGAGTCCCAGGACCTCACGCCGACTGTGCCCT...GCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGGAGTGGCTGCTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCTCTGCTTCCCAGCCTaGAAGGTGCCTCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: HSQPRSRPASSGALARPGLCFPA*KVPHQL
Trigger: CAGCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAG...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGGGATGCCCTGCGCTGTaGGGGGATGAAGATCCCGAA +
Preference number: 4 (lower is better)
Translates to: HSQPRSRPASSGALARPGGCPAL*GDEDPE
Trigger: TTCGGGATCTTCATCCCCTCACAGCGCAGGGCATCC...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CGAGGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGAGGATCACGTCGAAGCTaGTCCCCATGCTGTCGGCCC +
Preference number: 4 (lower is better)
Translates to: RGAAGPAAATSSCGTGARGSRRS*SPCCRP
Trigger: GGGCCGACAGCATGGGGATCAGCTTCGACGTGATCC...TCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGGCTGCCCCAAGATTTCCTGCCAGGGCACAGTCGGCGTGAGGTCCTGGGACTCGGGGCACTGGCAGCCTaGCCACCCGTGATCATGTCC +
Preference number: 4 (lower is better)
Translates to: RLPQDFLPGHSRREVLGLGALAA*PPVIMS
Trigger: GGACATGATCACGGGTGGTCAGGCTGCCAGTGCCCC...GAGTCCCAGGACCTCACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCCTCCAGGGGGCACTGGCAGCCTaGCCACCCGTGATCATGTCC +
Preference number: 4 (lower is better)
Translates to: IVAGRGTGSLTTRDHVLQGALAA*PPVIMS
Trigger: GGACATGATCACGGGTGGTCAGGCTGCCAGTGCCCC...CTGGAGGACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCAGGGCAGGGTTATTaGGCAGCAAGTGGGAACCGG +
Preference number: 4 (lower is better)
Translates to: HSQPRSRPASSGALARPGPGQGY*AASGNR
Trigger: CCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGG...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCTCCCGCTCCCTCCTGTaGCGTCTGAGCTCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGSRSLL*RLSSLK
Trigger: TTTCAGGGAGCTCAGACGTCACAGGAGGGAGCGGGA...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GGGCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCATCCCGCTCCCTCCTGTaGCGTCTGAGCTCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: GHSQPRSRPASSGALARPSRSLL*RLSSLK
Trigger: TTTCAGGGAGCTCAGACGTCACAGGAGGGAGCGGGA...TGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGTACGCTGGCCCCCTCCCTCCTGTaGGGCTCTCGTCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: HCASARPSCSGTRPRCTLAPSLL*GSRLGC
Trigger: ACACCCCAGACGAGAGCCTCACAGGAGGGAGGGGGC...CAGCGTACATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTCCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGTCAGAGGCAGCACACTaGACAGTCGCCAGGGACCAG +
Preference number: 4 (lower is better)
Translates to: LLLTGVLPGALRLSPSFMSEAAH*TVARDQ
Trigger: CTGGTCCCTGGCGACTGTTCAGTGTGCTGCCTCTGA...CATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR GCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCCAGAGTCTGGGGCTaGTCCGTGGCCATCCGGCAC +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLARVWG*SVAIRH
Trigger: GTGCCGGATGGCCACGGAGCAGCCCCAGACTCTGGC...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGAGGCCTCACACAGAGTaGCAGAGCCCTTCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: HSQPRSRPASSGALARPGRPHTE*QSPSAA
Trigger: TGCTGCGGAAGGGCTCTGGCACTCTGTGTGAGGCCT...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAACTCGCCCCTCCACTaGCAGGCCATCTTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGANSPLH*QAIFRW
Trigger: CCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGTT...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR GCA 90 bp GGGCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAAAGGGCCTCCCAATCTaGTCGATCAGCTCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: GHSQPRSRPASSGALARPKGLPI*SISSRA
Trigger: GGCACGGGAGCTGATCGAGCAGATTGGGAGGCCCTT...TGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCCTCCAGCCCAGGGCGGGAGGCTaGCCCAAGATTTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: IVAGRGTGSLTTRDHVLQPRAGG*PKISCQ
Trigger: CTGGCAGGAAATCTTGGGGCAGCCTCCCGCCCTGGG...CTGGAGGACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCCCTGAGCACACCCTCTaGCGACTCCAGACGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGAPEHTL*RLQTLP
Trigger: AGGCAGCGTCTGGAGTCGGCAGAGGGTGTGCTCAGG...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCTCATCTCGAAGGCCTaGGACAGGCAGGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGLISKA*DRQVSR
Trigger: CCTGGACACCTGCCTGTCGCAGGCCTTCGAGATGAG...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AACCCCAGACTCGAGGGCCTCCACGTGGCCCCCGACGTAGGTCTCAGAGTCCAGTGCTCCCTGGAGCACTaGGCCTCAGCCCGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: NPRLEGLHVAPDVGLRVQCSLEH*ASARPS
Trigger: TGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCA...CTGGACTCTGAGACCTACGTCGGGGGCCACGTGGAGGCCCTCGAGTCTGGGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GTCTCCCGCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCAGCCTCGCTCACGGCCTaGTTCTTCAGGTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: VSRAAAVHRHAGLLHPAAASLTA*FFRCSG
Trigger: GCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGC...TGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCCCACCAGGTGTGGTaGAGGAAGCAACAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: HSQPRSRPASSGALARPGPHQVW*RKQQRP
Trigger: AGGCCTCTGTTGCTTCCTGCACCACACCTGGTGGGG...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCTGGGGCTGCTCCGTaGCCATCCGGCACATGTCCT +
Preference number: 4 (lower is better)
Translates to: SLTACFFRCSGEARATSCSGAAP*PSGTCP
Trigger: AGGACATGTGCCGGATGGCCACGGAGCAGCCCCAGA...GCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCTACGTGGCCAGAGTCTaGGGCTGCTCCGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGAYVARV*GCSVAI
Trigger: GATGGCCACGGAGCAGCCCCAGACTCTGGCCACGTA...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCATGCCAGCCATCTCCATaGAGTACCAGCGAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: GHSQPRSRPASSGALARPCQPSP*STSEPP
Trigger: AGGGGGCTCGCTGGTACTCCATGGAGATGGCTGGCA...TGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGATCAGCTCCCGTGCCTaGGTGATGATGTTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: TGMWPWHQEAWHGRRGTRISSRA*VMMLAP
Trigger: AGGGGCCAACATCATCACCCAGGCACGGGAGCTGAT...CCGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACAAGTCGGCGTGAGGTCCTaGGACTCCTCCTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GAAGPAAATSSCGTGARQVGVRS*DSSWLS
Trigger: GGAGAGCCAGGAGGAGTCCCAGGACCTCACGCCGAC...TTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCACAAGCCATTCCTCCTaGCTGGTTCCCAGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGTSHSS*LVPRAG
Trigger: TCCCGCCCTGGGAACCAGCCAGGAGGAATGGCTTGT...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCACCGAAGAGCGCTTTGTaGGCCTGTGCGTGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: GHSQPRSRPASSGALARPPKSAL*ACAWWY
Trigger: GTACCACCACGCACAGGCCCACAAAGCGCTCTTCGG...TGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCCTGTCTCATCGTAGCTaGCCGGGGCACTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLLSHRS*PGHWQP
Trigger: AGGCTGCCAGTGCCCCGGCCAGCTACGATGAGACAG...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGAGGGCGCCTGACAGTTaGAGCAGAGCCACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: HSQPRSRPASSGALARPGRAPDS*SRATEA
Trigger: TGCCTCAGTGGCTCTGCTCCAACTGTCAGGCGCCCT...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGCCAGCGTCATCTCGATaGCAGAGGAGTCGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: ALAASLTACFFRCSGEARPASSR*QRSRRA
Trigger: CGCCCTACGACTCCTCTGCCATCGAGATGACGCTGG...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CTCCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGAGTACACAGGCATGCTaGTCTCCTTCACCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: LLLTGVLPGALRLSPSFMSTQAC*SPSPRG
Trigger: GCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACT...CATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCACGGGGATGTGGCCTTaGCATCAGGAGGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLTGMWP*HQEAWH
Trigger: GTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCACAGTGGTCTGGTCACTaGAAGCACGGGGATGTGGCC +
Preference number: 4 (lower is better)
Translates to: PPHGGAPWSTAPQPVLHAQWSGH*KHGDVA
Trigger: GGCCACATCCCCGTGCTTCCAGTGACCAGACCACTG...TGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCGGGTGGTCAGTGGTCTaGTCACTGGAAGCACGGGGA +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGGWSVV*SLEARG
Trigger: TCCCCGTGCTTCCAGTGACCAGACCACTGACCACCC...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCAAGACACGAGCCTCCTaGGGAGCCTGTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRKTRAS*GACGAP
Trigger: GGGGGCCCCACAGGCTCCCCAGGAGGCTCGTGTCTT...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR CAA 72 bp CAGTGGTCTGGTCACTGGAAGCACGGGGATGTGGCCTaGGCATCAGGAGGCCTGGCACGGACGCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: QWSGHWKHGDVA*ASGGLARTQRH
Trigger: GTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTGCTTCCAGTGACCAGACCACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CAA 72 bp GCGAGGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTaGTGGAACCGGAGCCAGACAAGCCATTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ARRCRACSCHFF*WNRSQTSHSSW
Trigger: CCAGGAGGAATGGCTTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCTCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCCGTCCAGGTGGTAGATaGGTGGACACTCGATGCGGC +
Preference number: 4 (lower is better)
Translates to: SLTACFFRCSGEARATSCRPGGR*VDTRCG
Trigger: GCCGCATCGAGTGTCCACTCATCTACCACCTGGACG...GCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGGTGACGTAGGTGAGTaGGGACGGCTCAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PTRALGTRLVSEPNLREPGDVGE*GRLSQL
Trigger: GAGCTGGCTGAGCCGTCCTCACTCACCTACGTCACC...TGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTGCAGCAGCCACTCCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCCGGGCTTGCGGGAGATaGTGTAGCGGCAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: LQQPLQGLQEVRHAVVLGRACGR*CSGNSA
Trigger: GGCTGAGTTGCCGCTACATCATCTCCCGCAAGCCCG...GCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGGAGTGGCTGCTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GGCACTGGCAGCCTGACCACCCGTGATCATGTCCTCCAGGGAGGCCTGCTGGATCCTCGGACTGTCTTCTaGGGCCTCGGCCATCGTGAC +
Preference number: 4 (lower is better)
Translates to: GTGSLTTRDHVLQGGLLDPRTVF*GLGHRD
Trigger: GTCACGATGGCCGAGGCCTCAGAAGACAGTCCGAGG...ATCCAGCAGGCCTCCCTGGAGGACATGATCACGGGTGGTCAGGCTGCCAGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCTCGATGTCTGGCGCTaGCAGCTCAGCGTTGATCTC +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGLDVWR*QLSVDL
Trigger: GAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAG...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GGGCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCACTCGATGTCTGGCGCTaGCAGCTCAGCGTTGATCTC +
Preference number: 4 (lower is better)
Translates to: GHSQPRSRPASSGALARPLDVWR*QLSVDL
Trigger: GAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAG...TGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTAGCTCCCAGCTGGACTaGACAGCGATGAGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: SSRGCSLEHCASARPSCSSSQLD*TAMSVG
Trigger: GCCCACACTCATCGCTGTTCAGTCCAGCTGGGAGCT...ACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTCCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGTACAGCTGCGGCAGATaGCCTCAGGAAGCACGTAGG +
Preference number: 4 (lower is better)
Translates to: LLLTGVLPGALRLSPSFMYSCGR*PQEARR
Trigger: CCTACGTGCTTCCTGAGGTCATCTGCCGCAGCTGTA...CATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTCCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCCAGGTCCTGCAGGGTaGAGGCCATCAGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLLTGVLPGALRLSPSFMPGPAG*RPSASS
Trigger: AGAAGAAGCTGATGGCCTTCACCCTGCAGGACCTGG...CATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GGGCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCACCAGGTCCTGCAGGGTaGAGGCCATCAGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GHSQPRSRPASSGALARPPGPAG*RPSASS
Trigger: AGAAGAAGCTGATGGCCTTCACCCTGCAGGACCTGG...TGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTGCAGCAGCCACTCCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCCACAAACTGCTCCTGTaGGGCTGTGGGGCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LQQPLQGLQEVRHAVVLGHKLLL*GCGASP
Trigger: TGGGCTGGCCCCACAGCCTCACAGGAGCAGTTTGTG...GCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGGAGTGGCTGCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCGGACAAGGGCTGCAGTaGGCCAAAAGTGAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGGQGLQ*AKSEVH
Trigger: GTGCACCTCACTTTTGGCTCACTGCAGCCCTTGTCC...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCACTTGTGGGCCAGCTaGAGCGAGTCATACAGCACC +
Preference number: 4 (lower is better)
Translates to: HSQPRSRPASSGALARPGHLWAS*SESYST
Trigger: GGTGCTGTATGACTCGCTGCAGCTGGCCCACAAGTG...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACAAGGGCCTCCCAATCTaGTCGATCAGCTCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: APWSTAPQPVLHAVVHGHKGLPI*SISSRA
Trigger: GGCACGGGAGCTGATCGAGCAGATTGGGAGGCCCTT...GTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAACTGGGTTCTTTACCTaGTGCAGGGCCGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: PPHGGAPWSTAPQPVLHATGFFT*CRAAGM
Trigger: CATCCCTGCGGCCCTGCAGCAGGTAAAGAACCCAGT...TGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTGCCCCAAGATTTCCTaGCAGGGCACAGTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: SLTACFFRCSGEARATSCCPKIS*QGTVGV
Trigger: CACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCA...GCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCTGCCGGGCCTGCAGCTaGCACTTCTTCTTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGCRACS*HFFLWN
Trigger: GTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCA...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGAAGGTCCAGGATGCTaGGGGCAGTTCTTCGCAAGA +
Preference number: 4 (lower is better)
Translates to: HGDVALASGGLARTQRHPEGPGC*GQFFAR
Trigger: TCTTGCGAAGAACTGCCCGCAGCATCCTGGACCTTC...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCGGCTGGGCATCTGGTTaGTGCGCACAGTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLGWASG*CAQCPA
Trigger: TGCTGGACACTGTGCGCAGCAACCAGATGCCCAGCC...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGTCAGCCCGTCCTTCATaGAGTGGTACACGGCCACGA +
Preference number: 4 (lower is better)
Translates to: ALAASLTACFFRCSGEARSARPS*SGTRPR
Trigger: TCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGA...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCATGCTCCCTGGAGCACTaGGCCTCAGCCCGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PTRALGTRLVSEPNLREPCSLEH*ASARPS
Trigger: TGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCA...TGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGGCAGACCAGGTCCTaGAGGGTGAAGGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGARQTRS*RVKAIS
Trigger: GCTGATGGCCTTCACCCTGCAGGACCTGGTCTGCCT...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCCCCCACCAGGTGTGGTaGAGGAAGCAACAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: SLTACFFRCSGEARATSCPHQVW*RKQQRP
Trigger: AGGCCTCTGTTGCTTCCTGCACCACACCTGGTGGGG...GCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCGAAACTGAGGAAGTaGCGCCATCATCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HSQPRSRPASSGALARPGPKLRK*RHHPCW
Trigger: CCAGCAGGGATGATGGCGCCACTTCCTCAGTTTCGG...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCATCTGGGGCTGCTCCGTaGCCATCCGGCACATGTCCT +
Preference number: 4 (lower is better)
Translates to: PTRALGTRLVSEPNLREPSGAAP*PSGTCP
Trigger: AGGACATGTGCCGGATGGCCACGGAGCAGCCCCAGA...TGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CCA 90 bp TCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCCACAGGCAGCACAGGTaGCTTCGTCCACCATGGCAG +
Preference number: 4 (lower is better)
Translates to: SLTACFFRCSGEARATSCHRQHR*LRPPWQ
Trigger: CTGCCATGGTGGACGAAGCCACCTGTGCTGCCTGTG...GCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp ACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGAAGGAGTTTTCCCGCTaGCAGATGGTGGTGAGACGC +
Preference number: 4 (lower is better)
Translates to: TGMWPWHQEAWHGRRGTRKEFSR*QMVVRR
Trigger: GCGTCTCACCACCATCTGCCAGCGGGAAAACTCCTT...CCGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCTGCCAGCCATCTCCATaGAGTACCAGCGAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGACQPSP*STSEPP
Trigger: AGGGGGCTCGCTGGTACTCCATGGAGATGGCTGGCA...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGGCCAGCTCCTGGTACTaGTCATTGGTGAAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: TGMWPWHQEAWHGRRGTRASSWY*SLVKPS
Trigger: GGAAGGCTTCACCAATGACCAGTACCAGGAGCTGGC...CCGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCCCGAAGAGCGCTTTGTaGGCCTGTGCGTGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLPKSAL*ACAWWY
Trigger: GTACCACCACGCACAGGCCCACAAAGCGCTCTTCGG...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCACCAGCGTCATCTCGATGGCAGAGGAGTCGTAGGGCGCCTGACAGTTGGAGCCAGAGCAGGTGGTTGTaGCGCTGGAGGTGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: PPASSRWQRSRRAPDSWSQSRWL*RWRWRA
Trigger: TGCCCGCCACCTCCAGCGCCACAACCACCTGCTCTG...GCTCCAACTGTCAGGCGCCCTACGACTCCTCTGCCATCGAGATGACGCTGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCCTCCAGCAGGGGTCTCGGAACTaGGCCTCCTCGGAGAACTCG +
Preference number: 4 (lower is better)
Translates to: IVAGRGTGSLTTRDHVLQQGSRN*ASSENS
Trigger: CGAGTTCTCCGAGGAGGCCCAGTTCCGAGACCCCTG...CTGGAGGACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGTACACAGGCATGCTaGTCTCCTTCACCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGASTQAC*SPSPRG
Trigger: GCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACT...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCGGGTGGTCAGTGGTCTaGTCACTGGAAGCACGGGGA +
Preference number: 4 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGAGWSVV*SLEARG
Trigger: TCCCCGTGCTTCCAGTGACCAGACCACTGACCACCC...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GTCTCCCGCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCAGGGTGGTCAGTGGTCTaGTCACTGGAAGCACGGGGA +
Preference number: 4 (lower is better)
Translates to: VSRAAAVHRHAGLLHPAAGWSVV*SLEARG
Trigger: TCCCCGTGCTTCCAGTGACCAGACCACTGACCACCC...TGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGCCCCGTTCCCTGGCCTaGGGTCACAGGTTTGGACAG +
Preference number: 4 (lower is better)
Translates to: PGALRLSPSFMQWYTATMPRSLA*GHRFGQ
Trigger: CTGTCCAAACCTGTGACCCCAGGCCAGGGAACGGGG...CATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTCTTCTTCAGGTGCTCTaGCGAGGCCAGGGCCACATC +
Preference number: 4 (lower is better)
Translates to: SSRGCSLEHCASARPSCSLLQVL*RGQGHI
Trigger: GATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAG...ACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGTCACGGGTTAGGGTCTaGATTCCTGGGGAAACCAGC +
Preference number: 4 (lower is better)
Translates to: HGDVALASGGLARTQRHPSRVRV*IPGETS
Trigger: GCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR CAA 72 bp GCCAGCTGCAGCGAGTCATACAGCACCTCCATGTTCTaGCAGCGCTTCACCTCAGCCGCGTCGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: ASCSESYSTSMF*QRFTSAASPTS
Trigger: GGAGGTGGGCGACGCGGCTGAGGTGAAGCGCTGCAAGAACATGGAGGTGCTGTATGACTCGCTGCAGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCTTGAGTGCCGAAACTaGGGAAGTGGCGCCATCATC +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGLECRN*GSGAII
Trigger: GATGATGGCGCCACTTCCTCAGTTTCGGCACTCAAG...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACAAGCTGGCAGATGGTGGTaGGACGCTCTTCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: GAAGPAAATSSCGTGARQAGRWW*DALPPW
Trigger: CCAAGGTGGAAGAGCGTCTCACCACCATCTGCCAGC...TTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp TCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTTCAGCCCTGCATCCTTaGCCATCTGGTCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSRGCSLEHCASARPSCSSALHP*PSGLPG
Trigger: TCCTGGGAGACCAGATGGTCAAGGATGCAGGGCTGA...ACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCTCAGCCCTGCATCCTTaGCCATCTGGTCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLSALHP*PSGLPG
Trigger: TCCTGGGAGACCAGATGGTCAAGGATGCAGGGCTGA...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCGGATGGCCCTCTCCGTaGCAGGGGAGCCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: VQEATEAWKSIHCVRNGAGWPSP*QGSPRA
Trigger: AGCCCGAGGGCTCCCCTGTCACGGAGAGGGCCATCC...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320574.10
CDS-3UTR TCA 90 bp CTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCACAAATGGCCAGTCAAAAGGCCTCGGCCATCGTaGCCTGTCTCCTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LHAQTVDCCPGLHKWPVKRPRPS*PVSCPP
Trigger: TGGAGGGCAGGAGACAGGTCACGATGGCCGAGGCCT...TTTGACTGGCCATTTGTGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACAAGCTTCCTCTTCACAGTaGCAGGGGCTGCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GAAGPAAATSSCGTGARQASSSQ*QGLLGE
Trigger: CTCACCCAGCAGCCCCTGTCACTGTGAAGAGGAAGC...TTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACAGTGACAGGGGCTGCTGGGTGAGGCAGCTTTACGAGGCCGAAGTCCTCCATAGGGCACAGTCGGCGTaGGGTCCTGGGACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HSDRGCWVRQLYEAEVLHRAQSA*GPGTPP
Trigger: AGGAGGAGTCCCAGGACCTCACGCCGACTGTGCCCT...ATGGAGGACTTCGGCCTCGTAAAGCTGCCTCACCCAGCAGCCCCTGTCACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GGAAGCCTATCTCCTGCTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCACTGGTTCCAGGTAGCTaGACTGGGCCAGAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: GSLSPAACSDRGLLPGPPLVPGS*TGPESA
Trigger: TGCGCTCTCTGGCCCAGTTCAGCTACCTGGAACCAG...TGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAGCAGGAGATAGGCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CCTCCGGGTCTAGCTCCACGGGATCATAGCCTAGCTTGGCCTTGGCGGCCGCCTTGCGCTGTGAGGGGATaGAGATCCCGAAGAGCGCTT +
Preference number: 4 (lower is better)
Translates to: PPGLAPRDHSLAWPWRPPCAVRG*RSRRAL
Trigger: AAGCGCTCTTCGGGATCTTCATCCCCTCACAGCGCA...AGGCGGCCGCCAAGGCCAAGCTAGGCTATGATCCCGTGGAGCTAGACCCGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GTCTCCCGCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCATGCGCTGTGAGGGGATaGAGATCCCGAAGAGCGCTT +
Preference number: 4 (lower is better)
Translates to: VSRAAAVHRHAGLLHPAACAVRG*RSRRAL
Trigger: AAGCGCTCTTCGGGATCTTCATCCCCTCACAGCGCA...TGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCGGATGCCCTGCGCTGTaGGGGGATGAAGATCCCGAA +
Preference number: 4 (lower is better)
Translates to: APGSMALPVQDPIVDLVSGCPAL*GDEDPE
Trigger: TTCGGGATCTTCATCCCCTCACAGCGCAGGGCATCC...GCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AAGACCTGGGTGTGGATGGTGAGGGCGAAGTCTCCCGCGCAGCTGCAGTACACAGAGGCCGTGCTCTGCTaGGTACAGGGCGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: KTWVWMVRAKSPAQLQYTEAVLC*VQGAKA
Trigger: AGCCTTGGCGCCCTGTACTCAGCAGAGCACGGCCTC...TGTGTACTGCAGCTGCGCGGGAGACTTCGCCCTCACCATCCACACCCAGGTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AAGACCTGGGTGTGGATGGTGAGGGCGAAGTCTCCCGCGCAGCTGCAGTACACATGGACTGAACAGCGATaGGTGTGGGCCCCCGGCGCT +
Preference number: 4 (lower is better)
Translates to: KTWVWMVRAKSPAQLQYTWTEQR*VWAPGA
Trigger: AGCGCCGGGGGCCCACACTCATCGCTGTTCAGTCCA...TGTGTACTGCAGCTGCGCGGGAGACTTCGCCCTCACCATCCACACCCAGGTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAAGCTCCCAGCTGGACTaGACAGCGATGAGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PTRALGTRLVSEPNLREPSSQLD*TAMSVG
Trigger: GCCCACACTCATCGCTGTTCAGTCCAGCTGGGAGCT...TGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCTGATGCAGTGCAAGTCACTGCCAACGAGCGCCCACAGCCTGAACAGGCCGGCAGCTCCCAGCTGGACTaGACAGCGATGAGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PDAVQVTANERPQPEQAGSSQLD*TAMSVG
Trigger: GCCCACACTCATCGCTGTTCAGTCCAGCTGGGAGCT...GCCGGCCTGTTCAGGCTGTGGGCGCTCGTTGGCAGTGACTTGCACTGCATCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GGCACTGGCAGCCTGACCACCCGTGATCATGTCCTCCAGGGAGGCCTGCTGGATAGCTCCCAGCTGGACTaGACAGCGATGAGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: GTGSLTTRDHVLQGGLLDSSQLD*TAMSVG
Trigger: GCCCACACTCATCGCTGTTCAGTCCAGCTGGGAGCT...ATCCAGCAGGCCTCCCTGGAGGACATGATCACGGGTGGTCAGGCTGCCAGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCCCCTCCATGTCGTTaGCATGGTGAGACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: HSQPRSRPASSGALARPGPPPCR*HGETGE
Trigger: TTCTCCAGTCTCACCATGTCAACGACATGGAGGGGG...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTCCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCCCCCTCCATGTCGTTaGCATGGTGAGACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LLLTGVLPGALRLSPSFMPPPCR*HGETGE
Trigger: TTCTCCAGTCTCACCATGTCAACGACATGGAGGGGG...CATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCTGTTGTGGTACTGGGTaGTCTCCTTCACCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGCCGTG*SPSPSP
Trigger: TGGGCTGGGTGAAGGAGATCACCCAGTACCACAACA...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTGCAGCAGCCACTCCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCCCAGGGCAGGGTTATTaGGCAGCAAGTGGGAACCGG +
Preference number: 4 (lower is better)
Translates to: LQQPLQGLQEVRHAVVLGPGQGY*AASGNR
Trigger: CCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGG...GCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGGAGTGGCTGCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTGCTGGATCACGTCGAAGCTGATCCCCATGCTGTCGGCCCCCTCCATGTCGTTTTGGAGCAGAGCCACTaGGGCAGGACCGCCCCATCC +
Preference number: 4 (lower is better)
Translates to: LLDHVEADPHAVGPLHVVLEQSH*GRTAPS
Trigger: GGATGGGGCGGTCCTGCCTCAGTGGCTCTGCTCCAA...AACGACATGGAGGGGGCCGACAGCATGGGGATCAGCTTCGACGTGATCCAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GGAAGCCTATCTCCTGCTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCACTCCATGCAAACAGGTaGGACTCCAGCCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: GSLSPAACSDRGLLPGPPLHANR*DSSPTR
Trigger: CCTGGTGGGGCTGGAGTCTCACCTGTTTGCATGGAG...TGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAGCAGGAGATAGGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS-3UTR GCA 90 bp CATGAACTCGCCCCTCCACTGCCAGGCCATCTTCCGCTGGCAGTTTGCTCCAGGCAGACCGTGGACTGCTaGCCGGGCCTCCACAAATGG +
Preference number: 4 (lower is better)
Translates to: HELAPPLPGHLPLAVCSRQTVDC*PGLHKW
Trigger: CCATTTGTGGAGGCCCGGGCAGCAGTCCACGGTCTG...CCTGGAGCAAACTGCCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGTTCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGTGGAAGCCTATCTCCTaGTGCATGCTCAGACCGTGG +
Preference number: 4 (lower is better)
Translates to: HSQPRSRPASSGALARPGWKPIS*CMLRPW
Trigger: CCACGGTCTGAGCATGCAGCAGGAGATAGGCTTCCA...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp ACAAGACAGTTGTCATCAGCCTCCTTTCCACCCAGGTCAGGGCGGGCTGTAGGGGCCAGAGTCTGGGGCTaGTCCGTGGCCATCCGGCAC +
Preference number: 4 (lower is better)
Translates to: TRQLSSASFPPRSGRAVGARVWG*SVAIRH
Trigger: GTGCCGGATGGCCACGGAGCAGCCCCAGACTCTGGC...CCCTACAGCCCGCCCTGACCTGGGTGGAAAGGAGGCTGATGACAACTGTCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp TCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTTTGGCGTGGAAGGCCTaGACCATCAGCAAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SSRGCSLEHCASARPSCSLAWKA*TISKAS
Trigger: TGAGGCCTTGCTGATGGTGCAGGCCTTCCACGCCAA...ACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCGCACCTCCATGTTCTTaGAGCGCTTCACCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLAPPCS*SASPQP
Trigger: CGGCTGAGGTGAAGCGCTGCAAGAACATGGAGGTGC...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGGTCAGGCATGTTGGCTaGCTTGCTGTACAGCACGTC +
Preference number: 4 (lower is better)
Translates to: HSQPRSRPASSGALARPGVRHVG*LAVQHV
Trigger: GACGTGCTGTACAGCAAGGCAGCCAACATGCCTGAC...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGCATTTCCGGAGAAAGTaGTTCCTCACCGTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: HGDVALASGGLARTQRHPHFRRK*FLTVGS
Trigger: AGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATG...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AGGCTGCCCCAAGATTTCCTGCCAGGGCACAGTCGGCGTGAGGTCCTGGGACTCTGCCCCAAGATTTCCTaGCAGGGCACAGTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: RLPQDFLPGHSRREVLGLCPKIS*QGTVGV
Trigger: CACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCA...GAGTCCCAGGACCTCACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ACAAGACAGTTGTCATCAGCCTCCTTTCCACCCAGGTCAGGGCGGGCTGTAGGGGCCGACTCCAGACGCTaGCTCTTCCTGCGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: TRQLSSASFPPRSGRAVGADSRR*LFLRAR
Trigger: CCTCGCCCGCAGGAAGAGGCAGCGTCTGGAGTCGGC...CCCTACAGCCCGCCCTGACCTGGGTGGAAAGGAGGCTGATGACAACTGTCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCACGGAAGGTCCAGGATaGTGCGGGCAGTTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: SLTACFFRCSGEARATSCTEGPG*CGQFFA
Trigger: TGCGAAGAACTGCCCGCAGCATCCTGGACCTTCCGT...GCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AGGGCGGGAGGCTGCCCCAAGATTTCCTGCCAGGGCACAGTCGGCGTGAGGTCCCTCAGCCTGATGCAGTaGAAGTCACTGCCAACGAGC +
Preference number: 4 (lower is better)
Translates to: RAGGCPKISCQGTVGVRSLSLMQ*KSLPTS
Trigger: GCTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAG...GGACCTCACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCAGCCTCCCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCGGCTGGGCATCTGGTTaGTGCGCACAGTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: APGSMALPVQDPIVDLVSGWASG*CAQCPA
Trigger: TGCTGGACACTGTGCGCAGCAACCAGATGCCCAGCC...GCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCAGACCAGGTCCTGCAGCTCATCTCGAAGGCCTaGGACAGGCAGGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RHAGLLHPAALQADQVLQLISKA*DRQVSR
Trigger: CCTGGACACCTGCCTGTCGCAGGCCTTCGAGATGAG...CTGCAGGACCTGGTCTGCCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGTCCTCCAGGGAGGCCTaGTGGATCACGTCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQSSREA*WITSKL
Trigger: CAGCTTCGACGTGATCCAGCAGGCCTCCCTGGAGGA...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGATCCTCTGCTCCCCCTaGTTTCTGGGAGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: HSQPRSRPASSGALARPGILCSP*FLGVLQ
Trigger: CTGCAAGACTCCCAGAAAGCAGGGGGAGCAGAGGAT...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCAGGCAGACCAGGTCCTaGAGGGTGAAGGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: APGSMALPVQDPIVDLVSRQTRS*RVKAIS
Trigger: GCTGATGGCCTTCACCCTGCAGGACCTGGTCTGCCT...GCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCTGCAGTACACAGGCATaGTGGTCTCCTTCACCCCGC +
Preference number: 4 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLCSTQA*WSPSPR
Trigger: GCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCA...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCAGCTGTGGGTTCTTCTaGAGCAGCCACTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SLTACFFRCSGEARATSCSCGFF*SSHSRV
Trigger: GACCCTGGAGTGGCTGCTGCAGAAGAACCCACAGCT...GCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGTACGCTGGCCTCGCTCACGGCCTaGTTCTTCAGGTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: HCASARPSCSGTRPRCTLASLTA*FFRCSG
Trigger: GCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGC...CAGCGTACATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GGAAGCCTATCTCCTGCTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCACCCCACCAGGTGTGGTaGAGGAAGCAACAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GSLSPAACSDRGLLPGPPPHQVW*RKQQRP
Trigger: AGGCCTCTGTTGCTTCCTGCACCACACCTGGTGGGG...TGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAGCAGGAGATAGGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp TCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCCCCTGGCTGTCCTTCTaGAAGCCTATCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLTACFFRCSGEARATSCPWLSF*KPISCC
Trigger: GCAGCAGGAGATAGGCTTCCAGAAGGACAGCCAGGG...GCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGTCCATGTGGATGCACTaGGGCGCCTTGTACTCCCCC +
Preference number: 4 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQSMWMH*GALYSP
Trigger: GGGGGAGTACAAGGCGCCCCAGTGCATCCACATGGA...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCACTGACACAGAATACGTaGCCAGAGTCTGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GHSQPRSRPASSGALARPLTQNT*PESGAA
Trigger: AGCAGCCCCAGACTCTGGCCACGTATTCTGTGTCAG...TGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCATGGTGCTGGATCCGATaGTATTCGCTGCGACTGGCT +
Preference number: 4 (lower is better)
Translates to: GHSQPRSRPASSGALARPWCWIR*YSLRLA
Trigger: AGCCAGTCGCAGCGAATACCATCGGATCCAGCACCA...TGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGATGAAAGGCCCGAGCTaGCCCCTCTGGGAACAAGGG +
Preference number: 4 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQMKGPS*PLWEQG
Trigger: CCCTTGTTCCCAGAGGGGCCAGCTCGGGCCTTTCAT...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CCA 90 bp CCTCCGGGTCTAGCTCCACGGGATCATAGCCTAGCTTGGCCTTGGCGGCCGCCTATCAGCTCCCGTGCCTaGGTGATGATGTTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PPGLAPRDHSLAWPWRPPISSRA*VMMLAP
Trigger: AGGGGCCAACATCATCACCCAGGCACGGGAGCTGAT...AGGCGGCCGCCAAGGCCAAGCTAGGCTATGATCCCGTGGAGCTAGACCCGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGGGCTCAGCCAGCTCCTaGTACTGGTCATTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: HSQPRSRPASSGALARPGGSASS*YWSLVK
Trigger: CTTCACCAATGACCAGTACCAGGAGCTGGCTGAGCC...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GAAGCACGTAGGAGCGGCAGGGGTCTCGGAACTGGGCCTCCTCGGAGAACTCGCGCATCCTTGACCATCTaGTCTCCCAGGAACTCGGCC +
Preference number: 4 (lower is better)
Translates to: EARRSGRGLGTGPPRRTRASLTI*SPRNSA
Trigger: GGCCGAGTTCCTGGGAGACCAGATGGTCAAGGATGC...GCGAGTTCTCCGAGGAGGCCCAGTTCCGAGACCCCTGCCGCTCCTACGTGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCAGTGACAGGGGCTGCTaGGTGAGGCAGCTTTACGAG +
Preference number: 4 (lower is better)
Translates to: SLTACFFRCSGEARATSCSDRGC*VRQLYE
Trigger: CTCGTAAAGCTGCCTCACCCAGCAGCCCCTGTCACT...GCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CGAGGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGATCCTGGGACTCCTCCTaGCTCTCCCAAAGAACTCGC +
Preference number: 4 (lower is better)
Translates to: RGAAGPAAATSSCGTGARSWDSS*LSQRTR
Trigger: GCGAGTTCTTTGGGAGAGCCAGGAGGAGTCCCAGGA...TCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTAGCTCCCCAGCCCCGTaGCAGGACCATCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: ATEAWKSIHCVRNGAQGTSSPAP*QDHPGW
Trigger: CCATCCGGGATGGTCCTGCCACGGGGCTGGGGAGCT...AGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGATGGCGGATACTCCCTaGTTCCAGGTAGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: HGDVALASGGLARTQRHPMADTP*FQVAEL
Trigger: CAGTTCAGCTACCTGGAACCAGGGAGTATCCGCCAT...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGCGAGCAGGAATCGCTaGATGGCTCTGCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: APWSTAPQPVLHAVVHGHASRNR*MALQMV
Trigger: GACCATCTGCAGAGCCATCCAGCGATTCCTGCTCGC...GTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGAGACAGGAATTTCACTaGCCAGCCTCTTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: TGMWPWHQEAWHGRRGTRRQEFH*PASSAP
Trigger: GGGAGCTGAAGAGGCTGGCCAGTGAAATTCCTGTCT...CCGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCGATGGCCTCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAATGCGCCGGGCTCCATaGCGCTGCCAGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: AMASDSRWQGQTKAGSGPMRRAP*RCQSRT
Trigger: GGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCAT...TGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGCCATCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AAGACCTGGGTGTGGATGGTGAGGGCGAAGTCTCCCGCGCAGCTGCAGTACACACAGAGCAGGTGGTTGTaGCGCTGGAGGTGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: KTWVWMVRAKSPAQLQYTQSRWL*RWRWRA
Trigger: TGCCCGCCACCTCCAGCGCCACAACCACCTGCTCTG...TGTGTACTGCAGCTGCGCGGGAGACTTCGCCCTCACCATCCACACCCAGGTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCAGCCTGATGCAGTGCAAGTCACTGCCAACGAGCGCCCACAGCCTGAACAGCAGAGCAGGTGGTTGTaGCGCTGGAGGTGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: AQPDAVQVTANERPQPEQQSRWL*RWRWRA
Trigger: TGCCCGCCACCTCCAGCGCCACAACCACCTGCTCTG...CTGTTCAGGCTGTGGGCGCTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACTCCAGGGAGGCCTGCTaGATCACGTCGAAGCTGATC +
Preference number: 4 (lower is better)
Translates to: APWSTAPQPVLHAVVHGHSREAC*ITSKLI
Trigger: GATCAGCTTCGACGTGATCCAGCAGGCCTCCCTGGA...GTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CGAGGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGATCCAGGGAGGCCTGCTaGATCACGTCGAAGCTGATC +
Preference number: 4 (lower is better)
Translates to: RGAAGPAAATSSCGTGARSREAC*ITSKLI
Trigger: GATCAGCTTCGACGTGATCCAGCAGGCCTCCCTGGA...TCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CTCCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGATGAAGCAGAGAGGATaGCGACCGAAGCCAGCGGTA +
Preference number: 4 (lower is better)
Translates to: LLLTGVLPGALRLSPSFMMKQRG*RPKPAV
Trigger: TACCGCTGGCTTCGGTCGCCATCCTCTCTGCTTCAT...CATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCACCGTCCTTCATGCAGTaGTACACGGCCACGATGTAC +
Preference number: 4 (lower is better)
Translates to: GHSQPRSRPASSGALARPPSFMQ*YTATMY
Trigger: GTACATCGTGGCCGTGTACCACTGCATGAAGGACGG...TGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCACGGGGGTGCTCCCTaGAGCACTGCGCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: LQGRVIEQQVGTGEDRKHHGGAP*STAPQP
Trigger: GGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTG...ATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCCACGGGGGTGCTCCCTaGAGCACTGCGCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QGRVIEQQVGTGEDRKHLHGGAP*STAPQP
Trigger: GGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTG...GAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACAAAGTACACAGGCATGCTaGTCTCCTTCACCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: GAAGPAAATSSCGTGARQSTQAC*SPSPRG
Trigger: GCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACT...TTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGTTTGGACAGTCAGGGTaGTCAGTGGTCTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: TGMWPWHQEAWHGRRGTRFGQSG*SVVWSL
Trigger: CAGTGACCAGACCACTGACCACCCTGACTGTCCAAA...CCGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCCCCCGTTCCCTGGCCTaGGGTCACAGGTTTGGACAG +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLPRSLA*GHRFGQ
Trigger: CTGTCCAAACCTGTGACCCCAGGCCAGGGAACGGGG...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCAGACCAGGTCCTGCAGTTCCTCCCCGTTCCCTaGCCTGGGGTCACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: RHAGLLHPAALQADQVLQFLPVP*PGVTGL
Trigger: CAAACCTGTGACCCCAGGCCAGGGAACGGGGAGGAA...CTGCAGGACCTGGTCTGCCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGTGGCGACAGCATCTaGCACAGAATACGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGASGDSI*HRIRGQ
Trigger: CTGGCCACGTATTCTGTGTCAGATGCTGTCGCCACT...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp ACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGCCTCTTCAAAGTTGGTaGCTTGCTCCACAGGCACTT +
Preference number: 4 (lower is better)
Translates to: TGMWPWHQEAWHGRRGTRPLQSW*LAPQAL
Trigger: AAGTGCCTGTGGAGCAAGTCACCAACTTTGAAGAGG...CCGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CACGGTGTCCACGTAGAAGGAGTTTTCCCGCTGGCAGATGGTGGTGAGACGCTCTGCGACTGGCTGGCATaGACTCGCCCCTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: HGVHVEGVFPLADGGETLCDWLA*TRPSTA
Trigger: GGCAGTGGAGGGGCGAGTTCATGCCAGCCAGTCGCA...GAGCGTCTCACCACCATCTGCCAGCGGGAAAACTCCTTCTACGTGGACACCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCGATGGCCTCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCATCGCGGGACAGTTCATaGAAGGCCCGAGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: AMASDSRWQGQTKAGSGPSRDSS*KARAGP
Trigger: GGGGCCAGCTCGGGCCTTTCATGAACTGTCCCGCGA...TGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGCCATCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp CCTCCACGTTGGATTCCTCCGCCTCTTCCTCCTCCTCCCCATCTCTTTCCTCCTTCGCGGGACAGTTCATaGAAGGCCCGAGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: PPRWIPPPLPPPPHLFPPSRDSS*KARAGP
Trigger: GGGGCCAGCTCGGGCCTTTCATGAACTGTCCCGCGA...AGGAGGAAAGAGATGGGGAGGAGGAGGAAGAGGCGGAGGAATCCAACGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGAAAGATGCTGTTCTCTaGGCGGGTGACGTAGGTGAG +
Preference number: 4 (lower is better)
Translates to: ALAASLTACFFRCSGEARKDAVL*AGDVGE
Trigger: CTCACCTACGTCACCCGCTCAGAGAACAGCATCTTT...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AAGACCTGGGTGTGGATGGTGAGGGCGAAGTCTCCCGCGCAGCTGCAGTACACACCAGCGTGCTGCCCTTaGGGAAGGCCTCAAACACCG +
Preference number: 4 (lower is better)
Translates to: KTWVWMVRAKSPAQLQYTPACCP*GRPQTP
Trigger: CGGTGTTTGAGGCCTTCCTCAAGGGCAGCACGCTGG...TGTGTACTGCAGCTGCGCGGGAGACTTCGCCCTCACCATCCACACCCAGGTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ACACAGGTCCAGGTCGCGGCAGAAGTTACAGCTGCGGCAGATGACCTCAGGAAGAGGCCTCGGCCATCGTaGCCTGTCTCCTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: TQVQVAAEVTAAADDLRKRPRPS*PVSCPP
Trigger: TGGAGGGCAGGAGACAGGTCACGATGGCCGAGGCCT...CTTCCTGAGGTCATCTGCCGCAGCTGTAACTTCTGCCGCGACCTGGACCTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTAGGGCACAGTCGGCGTaGGGTCCTGGGACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ATEAWKSIHCVRNGAQGTRAQSA*GPGTPP
Trigger: AGGAGGAGTCCCAGGACCTCACGCCGACTGTGCCCT...AGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTCTGCTGAGTACAGGGCGCCAAGGCTGGGCATCTGGTTGCTGCGCACAGTGTGGGGGATGCTCAGCCTaGTGCAGTGCAAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: ALLSTGRQGWASGCCAQCGGCSA*CSASHC
Trigger: GCAGTGACTTGCACTGCATCAGGCTGAGCATCCCCC...ACACTGTGCGCAGCAACCAGATGCCCAGCCTTGGCGCCCTGTACTCAGCAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCGGATGCCCTGCGCTGTaGGGGGATGAAGATCCCGAA +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRGCPAL*GDEDPE
Trigger: TTCGGGATCTTCATCCCCTCACAGCGCAGGGCATCC...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCGAGGCCGTGCTCTGCTaGGTACAGGGCGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLEAVLC*VQGAKA
Trigger: AGCCTTGGCGCCCTGTACTCAGCAGAGCACGGCCTC...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCGATGGCCTCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCATGGACTGAACAGCGATaGGTGTGGGCCCCCGGCGCT +
Preference number: 4 (lower is better)
Translates to: AMASDSRWQGQTKAGSGPWTEQR*VWAPGA
Trigger: AGCGCCGGGGGCCCACACTCATCGCTGTTCAGTCCA...TGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGCCATCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGCCAGGACCCCATAGTTaGTCTTGTCAGCCACACAGA +
Preference number: 4 (lower is better)
Translates to: ALAASLTACFFRCSGEARPGPHS*SCQPHR
Trigger: TCTGTGTGGCTGACAAGATCAACTATGGGGTCCTGG...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCAGACCAGGTCCTGCAGTTGACGGCCAGGTTCTaGAGGTCCAGCTCCACACAC +
Preference number: 4 (lower is better)
Translates to: RHAGLLHPAALQADQVLQLTARF*RSSSTH
Trigger: GTGTGTGGAGCTGGACCTTCAGAACCTGGCCGTCAA...CTGCAGGACCTGGTCTGCCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCAGCCGGGGCACTGGCAGCCTaGCCACCCGTGATCATGTCC +
Preference number: 4 (lower is better)
Translates to: CEAVGPAHFSMQTGETPAGALAA*PPVIMS
Trigger: GGACATGATCACGGGTGGTCAGGCTGCCAGTGCCCC...GGCTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCGATGGCCTCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAGGGGCACTGGCAGCCTaGCCACCCGTGATCATGTCC +
Preference number: 4 (lower is better)
Translates to: AMASDSRWQGQTKAGSGPGALAA*PPVIMS
Trigger: GGACATGATCACGGGTGGTCAGGCTGCCAGTGCCCC...TGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGCCATCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCGGGGCACTGGCAGCCTaGCCACCCGTGATCATGTCC +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLGALAA*PPVIMS
Trigger: GGACATGATCACGGGTGGTCAGGCTGCCAGTGCCCC...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TGTCTCATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCCCAGGGCAGGGTTATTaGGCAGCAAGTGGGAACCGG +
Preference number: 4 (lower is better)
Translates to: CLIVAGRGTGSLTTRDHVPGQGY*AASGNR
Trigger: CCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGG...GACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGATGAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTCTGCTGAGTACAGGGCGCCAAGGCTGGGCATCTGGTTGCTGCGCACAGTGTCCAGGGCAGGGTTATTaGGCAGCAAGTGGGAACCGG +
Preference number: 4 (lower is better)
Translates to: ALLSTGRQGWASGCCAQCPGQGY*AASGNR
Trigger: CCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGG...ACACTGTGCGCAGCAACCAGATGCCCAGCCTTGGCGCCCTGTACTCAGCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTTTGGAGCAGAGCCACTaGGGCAGGACCGCCCCATCC +
Preference number: 4 (lower is better)
Translates to: ATEAWKSIHCVRNGAQGTLEQSH*GRTAPS
Trigger: GGATGGGGCGGTCCTGCCTCAGTGGCTCTGCTCCAA...AGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCAGGTGCACCAGGGCCCGGAACAGTAACGGAACCTGAGTCTCATATACGCCCTTTGGAGCAGAGCCACTaGGGCAGGACCGCCCCATCC +
Preference number: 4 (lower is better)
Translates to: PGAPGPGTVTEPESHIRPLEQSH*GRTAPS
Trigger: GGATGGGGCGGTCCTGCCTCAGTGGCTCTGCTCCAA...AGGGCGTATATGAGACTCAGGTTCCGTTACTGTTCCGGGCCCTGGTGCACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AAGGTGATCATTCCGGGAAGGGCTCCGACCGCCCCCTCGGCCTCCTGGGAGAGCTTCCGATCTGTTCCATaGAGACCTGGGTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: KVIIPGRAPTAPSASWESFRSVP*RPGCGW
Trigger: CCATCCACACCCAGGTCTTCATGGAACAGATCGGAA...GCTCTCCCAGGAGGCCGAGGGGGCGGTCGGAGCCCTTCCCGGAATGATCACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGTACGCTGCTCCATGCAAACAGGTaGGACTCCAGCCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: HCASARPSCSGTRPRCTLLHANR*DSSPTR
Trigger: CCTGGTGGGGCTGGAGTCTCACCTGTTTGCATGGAG...CAGCGTACATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCAATGTTCCGGAATAGCCCCCTCCCTCCTGTaGGGCTCTCGTCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: PGSPGGTTCRSAGQCSGIAPSLL*GSRLGC
Trigger: ACACCCCAGACGAGAGCCTCACAGGAGGGAGGGGGC...TATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCAGACCAGGTCCTGCAGGCGGCAACTCAGCCCTaGATCCTTGACCATCTGGTC +
Preference number: 4 (lower is better)
Translates to: RHAGLLHPAALQADQVLQAATQP*ILDHLV
Trigger: GACCAGATGGTCAAGGATGCAGGGCTGAGTTGCCGC...CTGCAGGACCTGGTCTGCCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCCCAGGGCGGGAGGCTaGCCCAAGATTTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLPRAGG*PKISCQ
Trigger: CTGGCAGGAAATCTTGGGGCAGCCTCCCGCCCTGGG...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGTGCCGGGCCTGCAGCTaGCACTTCTTCTTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: AQLQYTGMLVSFTPRHFRCRACS*HFFLWN
Trigger: GTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCA...CCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGACGCTGCCTCTTCCTaGGGGCGAGGCGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNDAASS*GRGAAG
Trigger: CCCGGCAGCGCCTCGCCCGCAGGAAGAGGCAGCGTC...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTGCTGGATCACGTCGAAGCTGATCCCCATGCTGTCGGCCCCCTCCATGTCGTTCCTGAGCACACCCTCTaGCGACTCCAGACGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LLDHVEADPHAVGPLHVVPEHTL*RLQTLP
Trigger: AGGCAGCGTCTGGAGTCGGCAGAGGGTGTGCTCAGG...AACGACATGGAGGGGGCCGACAGCATGGGGATCAGCTTCGACGTGATCCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCCTCAGCCTGATGCAGTaGAAGTCACTGCCAACGAGC +
Preference number: 4 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLLSLMQ*KSLPTS
Trigger: GCTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAG...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTCCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGATCGCTGGATGGCTCTaGAGATGGTCTTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LLLTGVLPGALRLSPSFMIAGWL*RWSSGQ
Trigger: CTGACCTGAAGACCATCTGCAGAGCCATCCAGCGAT...CATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CATGAACTCGCCCCTCCACTGCCAGGCCATCTTCCGCTGGCAGTTTGCTCCAGGCTCATCTCGAAGGCCTaGGACAGGCAGGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HELAPPLPGHLPLAVCSRLISKA*DRQVSR
Trigger: CCTGGACACCTGCCTGTCGCAGGCCTTCGAGATGAG...CCTGGAGCAAACTGCCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGTTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCTTCCTGCTCATCCTCTaGTCCCCCTGCTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGAFLLIL*SPCFLG
Trigger: TCCCAGAAAGCAGGGGGAGCAGAGGATGAGCAGGAA...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGTCCTCCTCACGGGGGTaGTCCCTGGAGCACTGCGCC +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVSSSRG*SLEHCA
Trigger: GGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGA...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACTCCTCCTCACGGGGGTaGTCCCTGGAGCACTGCGCC +
Preference number: 4 (lower is better)
Translates to: NSRAGLLSSKWEPGRTGNSSSRG*SLEHCA
Trigger: GGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGA...GTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAATCCTCCTCACGGGGGTaGTCCCTGGAGCACTGCGCC +
Preference number: 4 (lower is better)
Translates to: ELQGRVIEQQVGTGEDRKSSSRG*SLEHCA
Trigger: GGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGA...TTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCACCAGCGTCATCTCGATGGCAGAGGAGTCGTAGGGCGCCTGACAGTTGGAGCAGGCAGACCAGGTCCTaGAGGGTGAAGGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: PPASSRWQRSRRAPDSWSRQTRS*RVKAIS
Trigger: GCTGATGGCCTTCACCCTGCAGGACCTGGTCTGCCT...GCTCCAACTGTCAGGCGCCCTACGACTCCTCTGCCATCGAGATGACGCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACAATGCAGTACACAGGCATaGTGGTCTCCTTCACCCCGC +
Preference number: 4 (lower is better)
Translates to: GAAGPAAATSSCGTGARQCSTQA*WSPSPR
Trigger: GCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCA...TTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GGGCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCATGGAAAAGCATTCACTaGGTGAGAAACGGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: GHSQPRSRPASSGALARPWKSIH*VRNGAQ
Trigger: CTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCA...TGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGCGCTCCTCAGAGACATaGAGCCGTTGGCTACCACCT +
Preference number: 4 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQRSSET*SRWLPP
Trigger: AGGTGGTAGCCAACGGCTCCATGTCTCTGAGGAGCG...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCGCCATCATCCCTGCTaGCCTCGCCATCCGCGCCTG +
Preference number: 4 (lower is better)
Translates to: VQEATEAWKSIHCVRNGARHHPC*PRHPRL
Trigger: CAGGCGCGGATGGCGAGGCCAGCAGGGATGATGGCG...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCTCCATGTGGATGCACTaGGGCGCCTTGTACTCCCCC +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRSMWMH*GALYSP
Trigger: GGGGGAGTACAAGGCGCCCCAGTGCATCCACATGGA...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCCTGAGGCAGTCCATGTaGATGCACTGGGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLLRQSM*MHWGAL
Trigger: CAAGGCGCCCCAGTGCATCCACATGGACTGCCTCAG...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGCGCCTGGGTAGGAGATaGTCACTTTGGGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: ALAASLTACFFRCSGEARRLGRR*SLWASS
Trigger: TGAAGAAGCCCAAAGTGACCATCTCCTACCCAGGCG...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGGGAACTTCTCTGACTCCAGCTGGTGCTGGATCCGATGGTATTCGCTGCGACGTCGGCGTGAGGTCCTaGGACTCCTCCTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GGTSLTPAGAGSDGIRCDVGVRS*DSSWLS
Trigger: GGAGAGCCAGGAGGAGTCCCAGGACCTCACGCCGAC...GTCGCAGCGAATACCATCGGATCCAGCACCAGCTGGAGTCAGAGAAGTTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCCACACAGATAGGCACAGCTCCCCAGCCCCGTaGCAGGACCATCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: ALPVQDPIVDLVSHTDRHSSPAP*QDHPGW
Trigger: CCATCCGGGATGGTCCTGCCACGGGGCTGGGGAGCT...GTGCCTATCTGTGTGGCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCCCACCTCCACGGCCGCCGAGAGCTTCTTTTTCCACACCTTGTGGAGCCCTTTCTGAACAGGCCGGCCTaGCTGGTCTCGCTGATCTGC +
Preference number: 4 (lower is better)
Translates to: AHLHGRRELLFPHLVEPFLNRPA*LVSLIC
Trigger: GCAGATCAGCGAGACCAGCCAGGCCGGCCTGTTCAG...AAAGGGCTCCACAAGGTGTGGAAAAAGAAGCTCTCGGCGGCCGTGGAGGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCCCAAGGCTGGGCATCTaGTTGCTGCGCACAGTGTCC +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLPRLGI*LLRTVS
Trigger: GGACACTGTGCGCAGCAACCAGATGCCCAGCCTTGG...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TGTCTCATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCCCAAGGCTGGGCATCTaGTTGCTGCGCACAGTGTCC +
Preference number: 4 (lower is better)
Translates to: CLIVAGRGTGSLTTRDHVPRLGI*LLRTVS
Trigger: GGACACTGTGCGCAGCAACCAGATGCCCAGCCTTGG...GACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGATGAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGGCAGGAATCGCTGGATaGCTCTGCAGATGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: HSQPRSRPASSGALARPGAGIAG*LCRWSS
Trigger: TGAAGACCATCTGCAGAGCCATCCAGCGATTCCTGC...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGAGACAGGAATTTCACTaGCCAGCCTCTTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: HSQPRSRPASSGALARPGRQEFH*PASSAP
Trigger: GGGAGCTGAAGAGGCTGGCCAGTGAAATTCCTGTCT...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCGATACGAAGCACCCTCCTCCGCTTTAGCGACTCGCTGGTTCACGTAGAACACATGCGCCGGGCTCCATaGCGCTGCCAGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: AIRSTLLRFSDSLVHVEHMRRAP*RCQSRT
Trigger: GGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCAT...GTGTTCTACGTGAACCAGCGAGTCGCTAAAGCGGAGGAGGGTGCTTCGTATCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCGGTCGGAGCCGAATGTaGAGATGTCCTCTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLGRSRM*RCPLVG
Trigger: ACCTACCAGAGGACATCTCCACATTCGGCTCCGACC...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCATGAAGCAGAGAGGATaGCGACCGAAGCCAGCGGTA +
Preference number: 4 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLMKQRG*RPKPAV
Trigger: TACCGCTGGCTTCGGTCGCCATCCTCTCTGCTTCAT...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GTCTCCCGCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCAATGAAGCAGAGAGGATaGCGACCGAAGCCAGCGGTA +
Preference number: 4 (lower is better)
Translates to: VSRAAAVHRHAGLLHPAAMKQRG*RPKPAV
Trigger: TACCGCTGGCTTCGGTCGCCATCCTCTCTGCTTCAT...TGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGCACGGGGGTGCTCCCTaGAGCACTGCGCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQHGGAP*STAPQP
Trigger: GGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTG...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGTTATTGAGCAGCAAGTaGGAACCGGGGAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: HSQPRSRPASSGALARPGLLSSK*EPGRTG
Trigger: TCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAA...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCAGGGCGCCTGACAGTTaGAGCAGAGCCACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLRAPDS*SRATEA
Trigger: TGCCTCAGTGGCTCTGCTCCAACTGTCAGGCGCCCT...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCAGCCTGGCATCAGGAGGCCTaGCACGGACGCAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: CEAVGPAHFSMQTGETPAWHQEA*HGRRGT
Trigger: GGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCA...GGCTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCTGGCATCAGGAGGCCTaGCACGGACGCAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLWHQEA*HGRRGT
Trigger: GGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCA...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCACCAGCGTCATCTCGATGGCAGAGGAGTCGTAGGGCGCCTGACAGTTGGAGCCTTCTTCAGGTGCTCTaGCGAGGCCAGGGCCACATC +
Preference number: 4 (lower is better)
Translates to: PPASSRWQRSRRAPDSWSLLQVL*RGQGHI
Trigger: GATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAG...GCTCCAACTGTCAGGCGCCCTACGACTCCTCTGCCATCGAGATGACGCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTACCGCTCCCCGTCCCTaGGCTGATGTGGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: ATEAWKSIHCVRNGAQGTTAPRP*ADVGTE
Trigger: CTCTGTCCCCACATCAGCCCAGGGACGGGGAGCGGT...AGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR CCA 90 bp GCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGAGACATGGAGCCGTTaGCTACCACCTCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: APWSTAPQPVLHAVVHGHETWSR*LPPLLQ
Trigger: CTGAAGCAGAGGTGGTAGCCAACGGCTCCATGTCTC...GTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCCTCATCGGGTTCATTaGAGACACAAAAGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGPHRVH*RHKRGL
Trigger: AAGGCCCCTTTTGTGTCTTCAATGAACCCGATGAGG...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp AGGGCGGGAGGCTGCCCCAAGATTTCCTGCCAGGGCACAGTCGGCGTGAGGTCCCGTCCGTCAGCTTATTaGACTCCTGCTCTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: RAGGCPKISCQGTVGVRSRPSAY*TPALAC
Trigger: ACAAGCAAGAGCAGGAGTTCAATAAGCTGACGGACG...GGACCTCACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCAGCCTCCCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCTTGCTCCAGGCTTATTaGAGTCACAGGCAGCACAGG +
Preference number: 4 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGALLQAY*SHRQHR
Trigger: CCTGTGCTGCCTGTGACTTCAATAAGCCTGGAGCAA...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCTCGCGGGACAGTTCATaGAAGGCCCGAGCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: VQEATEAWKSIHCVRNGASRDSS*KARAGP
Trigger: GGGGCCAGCTCGGGCCTTTCATGAACTGTCCCGCGA...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGGAGCCCCCTTGCGCATaGCATAGCCATAGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: AQLQYTGMLVSFTPRHFREPPCA*HSHRRS
Trigger: ACTCCTTCTATGGCTATGTCATGCGCAAGGGGGCTC...CCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCAGCCGGTGACGTAGGTGAGTaGGGACGGCTCAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: CEAVGPAHFSMQTGETPAGDVGE*GRLSQL
Trigger: GAGCTGGCTGAGCCGTCCTCACTCACCTACGTCACC...GGCTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCCAGCGTGCTGCCCTTaGGGAAGGCCTCAAACACCG +
Preference number: 4 (lower is better)
Translates to: ATEAWKSIHCVRNGAQGTPACCP*GRPQTP
Trigger: CGGTGTTTGAGGCCTTCCTCAAGGGCAGCACGCTGG...AGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCCTCGGACTGTCTTCTaGGGCCTCGGCCATCGTGAC +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLPRTVF*GLGHRD
Trigger: GTCACGATGGCCGAGGCCTCAGAAGACAGTCCGAGG...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCGAGGCCGTGCTCTGCTaGGTACAGGGCGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: QGRVIEQQVGTGEDRKHLEAVLC*VQGAKA
Trigger: AGCCTTGGCGCCCTGTACTCAGCAGAGCACGGCCTC...GAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCTTGACGGCCAGGTTCTaGAGGTCCAGCTCCACACAC +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLLTARF*RSSSTH
Trigger: GTGTGTGGAGCTGGACCTTCAGAACCTGGCCGTCAA...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTGGATCACGTCGAAGCTaGTCCCCATGCTGTCGGCCC +
Preference number: 4 (lower is better)
Translates to: ATEAWKSIHCVRNGAQGTGSRRS*SPCCRP
Trigger: GGGCCGACAGCATGGGGATCAGCTTCGACGTGATCC...AGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GGCACTGGCAGCCTGACCACCCGTGATCATGTCCTCCAGGGAGGCCTGCTGGATTGTTGTGGTACTGGGTaGTCTCCTTCACCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GTGSLTTRDHVLQGGLLDCCGTG*SPSPSP
Trigger: TGGGCTGGGTGAAGGAGATCACCCAGTACCACAACA...ATCCAGCAGGCCTCCCTGGAGGACATGATCACGGGTGGTCAGGCTGCCAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGTATTCACCTGGTTTGTaGTGTTGGTGTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: HGDVALASGGLARTQRHPYSPGL*CWCPGT
Trigger: TGTCCCTGGACACCAACATCACAAACCAGGTGAATA...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCGACCGCCCCATCCTCTaGGAAGGAAGAGTCTTTACA +
Preference number: 4 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLDRPIL*EGRVFT
Trigger: TGTAAAGACTCTTCCTTCTCAGAGGATGGGGCGGTC...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACTTGGAGCAGAGCCACTaGGGCAGGACCGCCCCATCC +
Preference number: 4 (lower is better)
Translates to: NSRAGLLSSKWEPGRTGNLEQSH*GRTAPS
Trigger: GGATGGGGCGGTCCTGCCTCAGTGGCTCTGCTCCAA...GTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GAAGCACGTAGGAGCGGCAGGGGTCTCGGAACTGGGCCTCCTCGGAGAACTCGCGCAGTGAGCCAAAAGTaGGGTGCACAGAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: EARRSGRGLGTGPPRRTRAVSQK*GAQRSC
Trigger: ACAAGACCTCTGTGCACCTCACTTTTGGCTCACTGC...GCGAGTTCTCCGAGGAGGCCCAGTTCCGAGACCCCTGCCGCTCCTACGTGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCCACACAGATAGGCACAAGGAGACCTCTCCGTaGCAGGGGAGCCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: ALPVQDPIVDLVSHTDRHKETSP*QGSPRA
Trigger: AGCCCGAGGGCTCCCCTGTCACGGAGAGGTCTCCTT...GTGCCTATCTGTGTGGCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCAAGCCTATCTCCTGCTaGATGCTCAGACCGTGGACT +
Preference number: 4 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLKPISC*MLRPWT
Trigger: AGTCCACGGTCTGAGCATGCAGCAGGAGATAGGCTT...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp TCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTAAGCCTATCTCCTGCTaGATGCTCAGACCGTGGACT +
Preference number: 4 (lower is better)
Translates to: SSRGCSLEHCASARPSCSKPISC*MLRPWT
Trigger: AGTCCACGGTCTGAGCATGCAGCAGGAGATAGGCTT...ACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGGCAGTCCATGTGGATaGACTGGGGCGCCTTGTACT +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLGSPCG*TGAPCT
Trigger: AGTACAAGGCGCCCCAGTGCATCCACATGGACTGCC...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp TTTCCTGAGGCTGATAGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCGCCAGAGTCTGGGGCTaGTCCGTGGCCATCCGGCAC +
Preference number: 4 (lower is better)
Translates to: FPEADRGFPLDPAPNKQGARVWG*SVAIRH
Trigger: GTGCCGGATGGCCACGGAGCAGCCCCAGACTCTGGC...GCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCTATCAGCCTCAGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR GCA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGGTCTTCTCAACCCGCTaGAGCAGGAAGTCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQVFSTR*SRKSKA
Trigger: CGCCTTTGACTTCCTGCTGCAGCGGGTTGAGAAGAC...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR GCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGTCAAAGTTGGTGACTTaGTCCACAGGCACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: HGDVALASGGLARTQRHPSKLVT*STGTFS
Trigger: GGAGAAAGTGCCTGTGGAGCAAGTCACCAACTTTGA...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCCTCGGCCAGGCGCTTTaGTGTGCTGATGGACGTAGA +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRLGQAL*CADGRR
Trigger: TCTACGTCCATCAGCACAGCAAAGCGCCTGGCCGAG...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GGAAGCCTATCTCCTGCTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCACCTCACCGTGGGCTCTaGTTGGAAAATGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: GSLSPAACSDRGLLPGPPPHRGL*LENGKW
Trigger: CCACTTGCCATTTTCCAAGCAGAGCCCACGGTGAGG...TGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAGCAGGAGATAGGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CAGCTGCAGTTCCCCGCGGCGTTTGACCTCAAAGCCCTTGAGCTCAGCCAGAGAGGGTTCTTTACCTGCTaGAGGGCCGCAGGGATGGTG +
Preference number: 4 (lower is better)
Translates to: QLQFPAAFDLKALELSQRGFFTC*RAAGMV
Trigger: CACCATCCCTGCGGCCCTGCAGCAGGTAAAGAACCC...TCTCTGGCTGAGCTCAAGGGCTTTGAGGTCAAACGCCGCGGGGAACTGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp AACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACCCCAGGGCGGGAGGCTaGCCCAAGATTTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: NSRAGLLSSKWEPGRTGNPRAGG*PKISCQ
Trigger: CTGGCAGGAAATCTTGGGGCAGCCTCCCGCCCTGGG...GTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCAGCCAGGCGCTGCCGGGCCTaGAGCTGCCACTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: CEAVGPAHFSMQTGETPARRCRA*SCHFFL
Trigger: CAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCT...GGCTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCTCCACGTTGGATTCCTCCGCCTCTTCCTCCTCCTCCCCATCTCTTTCCTCCTCCTGAGCACACCCTCTaGCGACTCCAGACGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PPRWIPPPLPPPPHLFPPPEHTL*RLQTLP
Trigger: AGGCAGCGTCTGGAGTCGGCAGAGGGTGTGCTCAGG...AGGAGGAAAGAGATGGGGAGGAGGAGGAAGAGGCGGAGGAATCCAACGTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACAACTCAGCCTGATGCAGTaGAAGTCACTGCCAACGAGC +
Preference number: 4 (lower is better)
Translates to: GAAGPAAATSSCGTGARQLSLMQ*KSLPTS
Trigger: GCTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAG...TTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGAACTCAGCGATGAGCTaGAGGAAGAGCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: HGDVALASGGLARTQRHPNSAMS*RKSFFI
Trigger: GATGAAGAAGCTCTTCCTGCAGCTCATCGCTGAGTT...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGAACTCAGCGATGAGCTaGAGGAAGAGCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: TGMWPWHQEAWHGRRGTRNSAMS*RKSFFI
Trigger: GATGAAGAAGCTCTTCCTGCAGCTCATCGCTGAGTT...CCGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCAGACCAGGTCCTGCAGTTCCTGCTCATCCTCTaGTCCCCCTGCTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: RHAGLLHPAALQADQVLQFLLIL*SPCFLG
Trigger: TCCCAGAAAGCAGGGGGAGCAGAGGATGAGCAGGAA...CTGCAGGACCTGGTCTGCCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCTCGTCCTCATTTTCCTaGTCATCCTCTGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLSSSFS*SSSAPP
Trigger: AGGGGGAGCAGAGGATGAGCAGGAAAATGAGGACGA...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCGTTCTGGCAGGAGGCTaGCTGTGGCAAAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLVLAGG*LWQKLQ
Trigger: TTGCAGTTTTTGCCACAGGCAGCCTCCTGCCAGAAC...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGTACGCTGTCAGCCCGTCCTTCATaGAGTGGTACACGGCCACGA +
Preference number: 4 (lower is better)
Translates to: HCASARPSCSGTRPRCTLSARPS*SGTRPR
Trigger: TCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGA...CAGCGTACATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCGATGGCCTCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCATGCTCCCTGGAGCACTaGGCCTCAGCCCGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: AMASDSRWQGQTKAGSGPCSLEH*ASARPS
Trigger: TGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCA...TGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGCCATCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGTGTCCTCCTCACGGGGGTaGTCCCTGGAGCACTGCGCC +
Preference number: 4 (lower is better)
Translates to: PTSTRRSRSRFSLFTWFVSSSRG*SLEHCA
Trigger: GGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGA...CACAAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGCCAGGAGGTACGACATaGCGTAGTGCTGGGCAATGT +
Preference number: 4 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQPGGTT*RSAGQC
Trigger: ACATTGCCCAGCACTACGGCATGTCGTACCTCCTGG...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ACAAGACAGTTGTCATCAGCCTCCTTTCCACCCAGGTCAGGGCGGGCTGTAGGGGCCTCGCTCACGGCCTaGTTCTTCAGGTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: TRQLSSASFPPRSGRAVGASLTA*FFRCSG
Trigger: GCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGC...CCCTACAGCCCGCCCTGACCTGGGTGGAAAGGAGGCTGATGACAACTGTCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGCAGCCCATTTCTCCATaGAAACAGGTGAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: ALAASLTACFFRCSGEARQPISP*KQVRLQ
Trigger: CTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTG...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGGGTAATGCGAGTAGCTaGCCTCAACCATGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQGNASS*PQPCSP
Trigger: CGGAGAGCATGGTTGAGGGCAGCTACTCGCATTACC...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR CCA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGGGGCCTTCATATTCTaGCTTGGGGGTGAACTCAAA +
Preference number: 4 (lower is better)
Translates to: ALAASLTACFFRCSGEARGAFIF*LGGELK
Trigger: TTTGAGTTCACCCCCAAGCCAGAATATGAAGGCCCC...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCTGCTGAGTACAGGGCGCCAAGGCTGGGCATCTGGTTGCTGCGCACAGTGTATCAGCTCCCGTGCCTaGGTGATGATGTTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: ALLSTGRQGWASGCCAQCISSRA*VMMLAP
Trigger: AGGGGCCAACATCATCACCCAGGCACGGGAGCTGAT...ACACTGTGCGCAGCAACCAGATGCCCAGCCTTGGCGCCCTGTACTCAGCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGGCCAGCTCCTGGTACTaGTCATTGGTGAAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: AQLQYTGMLVSFTPRHFRASSWY*SLVKPS
Trigger: GGAAGGCTTCACCAATGACCAGTACCAGGAGCTGGC...CCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCAGTAGTCAGCCACCTTaGCTACAGAGCCATACACCT +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGSSQPP*LQSHTP
Trigger: AGGTGTATGGCTCTGTAGCCAAGGTGGCTGACTACT...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CGAGGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGAAGTGCTTCCTCACCGTaGGCTCTGCTTGGAAAATGG +
Preference number: 4 (lower is better)
Translates to: RGAAGPAAATSSCGTGARSASSP*ALLGKW
Trigger: CCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACT...TCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCACCAGCGTCATCTCGATGGCAGAGGAGTCGTAGGGCGCCTGACAGTTGGAGCAGTGACAGGGGCTGCTaGGTGAGGCAGCTTTACGAG +
Preference number: 4 (lower is better)
Translates to: PPASSRWQRSRRAPDSWSSDRGC*VRQLYE
Trigger: CTCGTAAAGCTGCCTCACCCAGCAGCCCCTGTCACT...GCTCCAACTGTCAGGCGCCCTACGACTCCTCTGCCATCGAGATGACGCTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCGCCATTCCTCCTGGCTaGTTCCCAGGGCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SRAGLLSSKWEPGRTGNIAIPPG*FPGREA
Trigger: AGCCTCCCGCCCTGGGAACCAGCCAGGAGGAATGGC...GATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCATGGCGGATACTCCCTaGTTCCAGGTAGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: SLTACFFRCSGEARATSCMADTP*FQVAEL
Trigger: CAGTTCAGCTACCTGGAACCAGGGAGTATCCGCCAT...GCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCTCCACGTTGGATTCCTCCGCCTCTTCCTCCTCCTCCCCATCTCTTTCCTCCTACAGGGCGCCAAGGCTaGGCATCTGGTTGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: PPRWIPPPLPPPPHLFPPTGRQG*ASGCCA
Trigger: TGCGCAGCAACCAGATGCCCAGCCTTGGCGCCCTGT...AGGAGGAAAGAGATGGGGAGGAGGAGGAAGAGGCGGAGGAATCCAACGTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AAGGTGATCATTCCGGGAAGGGCTCCGACCGCCCCCTCGGCCTCCTGGGAGAGCGCTCCACACACACTGTaGAGTAACAGCCTGAACTGT +
Preference number: 4 (lower is better)
Translates to: KVIIPGRAPTAPSASWESAPHTL*SNSLNC
Trigger: ACAGTTCAGGCTGTTACTCCACAGTGTGTGTGGAGC...GCTCTCCCAGGAGGCCGAGGGGGCGGTCGGAGCCCTTCCCGGAATGATCACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCTCCAGGGAGGCCTGCTaGATCACGTCGAAGCTGATC +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLSREAC*ITSKLI
Trigger: GATCAGCTTCGACGTGATCCAGCAGGCCTCCCTGGA...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCAGAGAGGATGGCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGCTGTCTCATCGTAGCTaGCCGGGGCACTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: AERMATEASGRSASPGCLLSHRS*PGHWQP
Trigger: AGGCTGCCAGTGCCCCGGCCAGCTACGATGAGACAG...CAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGCCATCCTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAACTCCACGTAAGCGATaGCATCTTCCACACGGCGCT +
Preference number: 4 (lower is better)
Translates to: PTRALGTRLVSEPNLREPTPRKR*HLPHGA
Trigger: AGCGCCGTGTGGAAGATGCCATCGCTTACGTGGAGT...TGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACAAACTCCACGTAAGCGATaGCATCTTCCACACGGCGCT +
Preference number: 4 (lower is better)
Translates to: GAAGPAAATSSCGTGARQTPRKR*HLPHGA
Trigger: AGCGCCGTGTGGAAGATGCCATCGCTTACGTGGAGT...TTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CTGCAGCAGCCACTCCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCCCGTCCTTCATGCAGTaGTACACGGCCACGATGTAC +
Preference number: 4 (lower is better)
Translates to: LQQPLQGLQEVRHAVVLGPSFMQ*YTATMY
Trigger: GTACATCGTGGCCGTGTACCACTGCATGAAGGACGG...GCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGGAGTGGCTGCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACAACCGTCCTTCATGCAGTaGTACACGGCCACGATGTAC +
Preference number: 4 (lower is better)
Translates to: GAAGPAAATSSCGTGARQPSFMQ*YTATMY
Trigger: GTACATCGTGGCCGTGTACCACTGCATGAAGGACGG...TTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGCACGGGGGTGCTCCCTaGAGCACTGCGCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: TYLMNSRAGLLSSKWEPGHGGAP*STAPQP
Trigger: GGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTG...CCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GATCATGCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTCCAGCGTCATCTCGATaGCAGAGGAGTCGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: DHAPGSMALPVQDPIVDLPASSR*QRSRRA
Trigger: CGCCCTACGACTCCTCTGCCATCGAGATGACGCTGG...AAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCATGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCATGAAGACCTGGGTGTaGATGGTGAGGGCGAAGTCT +
Preference number: 4 (lower is better)
Translates to: SLTACFFRCSGEARATSCMKTWV*MVRAKS
Trigger: AGACTTCGCCCTCACCATCCACACCCAGGTCTTCAT...GCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGACGGGGATGTGGCCTTaGCATCAGGAGGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: DELQGRVIEQQVGTGEDRTGMWP*HQEAWH
Trigger: GTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT...CCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AAGACCTGGGTGTGGATGGTGAGGGCGAAGTCTCCCGCGCAGCTGCAGTACACACAGTGGTCTGGTCACTaGAAGCACGGGGATGTGGCC +
Preference number: 4 (lower is better)
Translates to: KTWVWMVRAKSPAQLQYTQWSGH*KHGDVA
Trigger: GGCCACATCCCCGTGCTTCCAGTGACCAGACCACTG...TGTGTACTGCAGCTGCGCGGGAGACTTCGCCCTCACCATCCACACCCAGGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCCCCGTTCCCTGGCCTaGGGTCACAGGTTTGGACAG +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLPRSLA*GHRFGQ
Trigger: CTGTCCAAACCTGTGACCCCAGGCCAGGGAACGGGG...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AAGACCTGGGTGTGGATGGTGAGGGCGAAGTCTCCCGCGCAGCTGCAGTACACATTCCTCCCCGTTCCCTaGCCTGGGGTCACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: KTWVWMVRAKSPAQLQYTFLPVP*PGVTGL
Trigger: CAAACCTGTGACCCCAGGCCAGGGAACGGGGAGGAA...TGTGTACTGCAGCTGCGCGGGAGACTTCGCCCTCACCATCCACACCCAGGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GATCATGCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTCTTCTTCAGGTGCTCTaGCGAGGCCAGGGCCACATC +
Preference number: 4 (lower is better)
Translates to: DHAPGSMALPVQDPIVDLLLQVL*RGQGHI
Trigger: GATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAG...AAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCATGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACGCCCCACCAGGGCCTTaGGAACCCGTCTCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: NSRAGLLSSKWEPGRTGNAPPGP*EPVSSQ
Trigger: CTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGGC...GTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCATCACGGGTTAGGGTCTaGATTCCTGGGGAAACCAGC +
Preference number: 4 (lower is better)
Translates to: PTRALGTRLVSEPNLREPSRVRV*IPGETS
Trigger: GCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA...TGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGTGTGAGGCTCTCGTCTaGGGTGTCTGCATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: ALAASLTACFFRCSGEARCEALV*GVCISD
Trigger: ATCAGAAATGCAGACACCCCAGACGAGAGCCTCACA...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGTGTCCAGGGACAGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTAAGACACGAGCCTCCTaGGGAGCCTGTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GVQGQHLAHVFDELQGRVKTRAS*GACGAP
Trigger: GGGGGCCCCACAGGCTCCCCAGGAGGCTCGTGTCTT...AACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCTGTCCCTGGACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGAAATGGCAAGTGGGATaGCCCTGGGTAAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: ALAASLTACFFRCSGEARKWQVG*PWVRKT
Trigger: TGTCTTCCTTACCCAGGGCCATCCCACTTGCCATTT...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp AGGCTGCCCCAAGATTTCCTGCCAGGGCACAGTCGGCGTGAGGTCCTGGGACTCGCTCTGCTTGGAAAATaGCAAGTGGGATGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RLPQDFLPGHSRREVLGLALLGK*QVGWPW
Trigger: CCAGGGCCATCCCACTTGCCATTTTCCAAGCAGAGC...GAGTCCCAGGACCTCACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CAA 72 bp GCTTTACGAGGCCGAAGTCCTCCATGTCAGGAGCACTaGGCCTCGGACTGTCTTCTGAGGCCTCGGCCATCG +
Preference number: 4 (lower is better)
Translates to: ALRGRSPPCQEH*ASDCLLRPRPS
Trigger: CGATGGCCGAGGCCTCAGAAGACAGTCCGAGGCCAAGTGCTCCTGACATGGAGGACTTCGGCCTCGTAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGGGTCATCTCGGCGGGTaGTTTCTACCGGAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQGHLGG*FLPEKH
Trigger: ATGCTTTTCCGGTAGAAATCACCCGCCGAGATGACC...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp AGGCTGCCCCAAGATTTCCTGCCAGGGCACAGTCGGCGTGAGGTCCTGGGACTCCAGCATCAGGAAACTTaGGGGGCAGTTTGGTCGTCT +
Preference number: 4 (lower is better)
Translates to: RLPQDFLPGHSRREVLGLQHQET*GAVWSS
Trigger: AGACGACCAAACTGCCCCTCAAGTTTCCTGATGCTG...GAGTCCCAGGACCTCACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp TCTCTGACTCCAGCTGGTGCTGGATCCGATGGTATTCGCTGCGACTGGCTGGCACCTTGGCGGCCGCCTTaGGATTATGACTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: SLTPAGAGSDGIRCDWLAPWRPP*DYDCPQ
Trigger: CTGTGGGCAGTCATAATCTCAAGGCGGCCGCCAAGG...TGCCAGCCAGTCGCAGCGAATACCATCGGATCCAGCACCAGCTGGAGTCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCTGCACAGAGCAAAGATaGATGGGTGGACGTACTTCA +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGCTEQR*MGGRTS
Trigger: TGAAGTACGTCCACCCATTCATCTTTGCTCTGTGCA...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACCGTCCGTCAGCTTATTaGACTCCTGCTCTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: APWSTAPQPVLHAVVHGHRPSAY*TPALAC
Trigger: ACAAGCAAGAGCAGGAGTTCAATAAGCTGACGGACG...GTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CCAGGTGCACCAGGGCCCGGAACAGTAACGGAACCTGAGTCTCATATACGCCCTGGCGGTTGGTCAGGATaGTGTTGGGGTACATGGCCC +
Preference number: 4 (lower is better)
Translates to: PGAPGPGTVTEPESHIRPGGWSG*CWGTWP
Trigger: GGGCCATGTACCCCAACATCATCCTGACCAACCGCC...AGGGCGTATATGAGACTCAGGTTCCGTTACTGTTCCGGGCCCTGGTGCACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGTGCGACTGGCTGGCATaGACTCGCCCCTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQCDWLA*TRPSTA
Trigger: GGCAGTGGAGGGGCGAGTTCATGCCAGCCAGTCGCA...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp ACAAGACAGTTGTCATCAGCCTCCTTTCCACCCAGGTCAGGGCGGGCTGTAGGGGCTGGCAGATGGTGGTaGGACGCTCTTCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: TRQLSSASFPPRSGRAVGAGRWW*DALPPW
Trigger: CCAAGGTGGAAGAGCGTCTCACCACCATCTGCCAGC...CCCTACAGCCCGCCCTGACCTGGGTGGAAAGGAGGCTGATGACAACTGTCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CGCAAGGTCTTCTCAACCCGCTGCAGCAGGAAGTCAAAGGCGGCAGGATTCATCGGTGACGTAGGTGAGTaGGGACGGCTCAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RKVFSTRCSRKSKAAGFIGDVGE*GRLSQL
Trigger: GAGCTGGCTGAGCCGTCCTCACTCACCTACGTCACC...GATGAATCCTGCCGCCTTTGACTTCCTGCTGCAGCGGGTTGAGAAGACCTTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGAGGCCTCGGCCATCGTaGCCTGTCTCCTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQRPRPS*PVSCPP
Trigger: TGGAGGGCAGGAGACAGGTCACGATGGCCGAGGCCT...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCGATGGCCTCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAGGGGGATGCTCAGCCTaGTGCAGTGCAAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: AMASDSRWQGQTKAGSGPGGCSA*CSASHC
Trigger: GCAGTGACTTGCACTGCATCAGGCTGAGCATCCCCC...TGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGCCATCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GATCATGCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTTGCGCTGTGAGGGGATaGAGATCCCGAAGAGCGCTT +
Preference number: 4 (lower is better)
Translates to: DHAPGSMALPVQDPIVDLCAVRG*RSRRAL
Trigger: AAGCGCTCTTCGGGATCTTCATCCCCTCACAGCGCA...AAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCATGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACAGTGACAGGGGCTGCTGGGTGAGGCAGCTTTACGAGGCCGAAGTCCTCCATGGCAGGTGTCCAGGTTaGGGTAGTGACGGATCATGC +
Preference number: 4 (lower is better)
Translates to: HSDRGCWVRQLYEAEVLHGRCPG*GSDGSC
Trigger: GCATGATCCGTCACTACCTCAACCTGGACACCTGCC...ATGGAGGACTTCGGCCTCGTAAAGCTGCCTCACCCAGCAGCCCCTGTCACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCGGTCATCGAACTCCATaGCAAGACAGTTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGGHRTP*QDSCHQ
Trigger: CTGATGACAACTGTCTTGTCATGGAGTTCGATGACC...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TGTCTCATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCCCCCCTCCATGTCGTTaGCATGGTGAGACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: CLIVAGRGTGSLTTRDHVPPPCR*HGETGE
Trigger: TTCTCCAGTCTCACCATGTCAACGACATGGAGGGGG...GACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGATGAGACA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCGGATCACGTCGAAGCTaGTCCCCATGCTGTCGGCCC +
Preference number: 4 (lower is better)
Translates to: SRAGLLSSKWEPGRTGNIGSRRS*SPCCRP
Trigger: GGGCCGACAGCATGGGGATCAGCTTCGACGTGATCC...GATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAATGGATGCTGCTGGTaGTGTACTCCACGTAAGCGA +
Preference number: 4 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGANGCCW*CTPRKR
Trigger: TCGCTTACGTGGAGTACATCACCAGCAGCATCCATT...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GGGCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAATGGTGAAGAAGCTCTaGGTGAGCTCATTTGCGACA +
Preference number: 4 (lower is better)
Translates to: GHSQPRSRPASSGALARPMVKKL*VSSFAT
Trigger: TGTCGCAAATGAGCTCACTCAGAGCTTCTTCACCAT...TGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCTGATGCAGTGCAAGTCACTGCCAACGAGCGCCCACAGCCTGAACAGGCCGGCGACAGGAAACATCTCTaGGAGCTCAGTGGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: PDAVQVTANERPQPEQAGDRKHL*ELSGVP
Trigger: CGGAACTCCACTGAGCTCTCAGAGATGTTTCCTGTC...GCCGGCCTGTTCAGGCTGTGGGCGCTCGTTGGCAGTGACTTGCACTGCATCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGGGCGGGAGGCTGCCCCAAGATTTCCTGCCAGGGCACAGTCGGCGTGAGGTCCTATTCACCTGGTTTGTaGTGTTGGTGTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: RAGGCPKISCQGTVGVRSYSPGL*CWCPGT
Trigger: TGTCCCTGGACACCAACATCACAAACCAGGTGAATA...GGACCTCACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCAGCCTCCCGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCCTGGGTGTGGATGGTaGGGGCGAAGTCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKIPGCGW*GRSLPR
Trigger: GCGCGGGAGACTTCGCCCTCACCATCCACACCCAGG...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGCCTGGGTGTGGATGGTaGGGGCGAAGTCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: TYLMNSRAGLLSSKWEPGPGCGW*GRSLPR
Trigger: GCGCGGGAGACTTCGCCCTCACCATCCACACCCAGG...CCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GGAAGCCTATCTCCTGCTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCATTCCGATCTGTTCCATaGAGACCTGGGTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: GSLSPAACSDRGLLPGPPFRSVP*RPGCGW
Trigger: CCATCCACACCCAGGTCTTCATGGAACAGATCGGAA...TGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAGCAGGAGATAGGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCAGAGAGGATGGCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGTCCCGCTCCCTCCTGTaGCGTCTGAGCTCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: AERMATEASGRSASPGCLSRSLL*RLSSLK
Trigger: TTTCAGGGAGCTCAGACGTCACAGGAGGGAGCGGGA...CAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGCCATCCTCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCCCAGCATGAACCACCGCTGGTGGGTAATGCGAGTAGCTGCCCTCAACCATGCAAAGCATTCACTGCGTaGGAAACGGCGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: AQHEPPLVGNASSCPQPCKAFTA*ETAPRA
Trigger: TGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTT...GCATGGTTGAGGGCAGCTACTCGCATTACCCACCAGCGGTGGTTCATGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR TCA 90 bp CTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCACAAATGGCCAGTCAAAAAAGCATTCACTGCGTaGGAAACGGCGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LHAQTVDCCPGLHKWPVKKAFTA*ETAPRA
Trigger: TGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTT...TTTGACTGGCCATTTGTGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp ACACAGGTCCAGGTCGCGGCAGAAGTTACAGCTGCGGCAGATGACCTCAGGAAGCTCCATGCAAACAGGTaGGACTCCAGCCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: TQVQVAAEVTAAADDLRKLHANR*DSSPTR
Trigger: CCTGGTGGGGCTGGAGTCTCACCTGTTTGCATGGAG...CTTCCTGAGGTCATCTGCCGCAGCTGTAACTTCTGCCGCGACCTGGACCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACCACAAACTGCTCCTGTaGGGCTGTGGGGCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: NSRAGLLSSKWEPGRTGNHKLLL*GCGASP
Trigger: TGGGCTGGCCCCACAGCCTCACAGGAGCAGTTTGTG...GTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GAAGCACGTAGGAGCGGCAGGGGTCTCGGAACTGGGCCTCCTCGGAGAACTCGCACATGTCTACGTTTCTaGGTAACCACGCGCATGCGT +
Preference number: 4 (lower is better)
Translates to: EARRSGRGLGTGPPRRTRTCLRF*VTTRMR
Trigger: ACGCATGCGCGTGGTTACTCAGAAACGTAGACATGT...GCGAGTTCTCCGAGGAGGCCCAGTTCCGAGACCCCTGCCGCTCCTACGTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCTCTGCAGAACACTGTaGTCCCAGTTACTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AQLQYTGMLVSFTPRHFRLCRTL*SQLLRR
Trigger: CCTCCTGAGTAACTGGGATCACAGTGTTCTGCAGAG...CCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS-3UTR GCA 90 bp CTGGGTGATGATGTTGGCCCCTGTGAAGCAGACGATGCCAGCCATCTCCATGGACAGACCGTGGACTGCTaGCCGGGCCTCCACAAATGG +
Preference number: 4 (lower is better)
Translates to: LGDDVGPCEADDASHLHGQTVDC*PGLHKW
Trigger: CCATTTGTGGAGGCCCGGGCAGCAGTCCACGGTCTG...TCCATGGAGATGGCTGGCATCGTCTGCTTCACAGGGGCCAACATCATCACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GATCATGCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGGCAGTCCATGTGGATaGACTGGGGCGCCTTGTACT +
Preference number: 4 (lower is better)
Translates to: DHAPGSMALPVQDPIVDLGSPCG*TGAPCT
Trigger: AGTACAAGGCGCCCCAGTGCATCCACATGGACTGCC...AAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCATGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GCTCTGCTGAGTACAGGGCGCCAAGGCTGGGCATCTGGTTGCTGCGCACAGTGTGTCTTCTCAACCCGCTaGAGCAGGAAGTCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: ALLSTGRQGWASGCCAQCVFSTR*SRKSKA
Trigger: CGCCTTTGACTTCCTGCTGCAGCGGGTTGAGAAGAC...ACACTGTGCGCAGCAACCAGATGCCCAGCCTTGGCGCCCTGTACTCAGCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp TCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCAAGATCTTAATCAGCTaGAGTTCCCCGCGGCGTTTG +
Preference number: 4 (lower is better)
Translates to: SLTACFFRCSGEARATSCKILIS*SSPRRL
Trigger: CAAACGCCGCGGGGAACTGCAGCTGATTAAGATCTT...GCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCTCTGCTGAGTACAGGGCGCCAAGGCTGGGCATCTGGTTGCTGCGCACAGTGTGTCAGGCATGTTGGCTaGCTTGCTGTACAGCACGTC +
Preference number: 4 (lower is better)
Translates to: ALLSTGRQGWASGCCAQCVRHVG*LAVQHV
Trigger: GACGTGCTGTACAGCAAGGCAGCCAACATGCCTGAC...ACACTGTGCGCAGCAACCAGATGCCCAGCCTTGGCGCCCTGTACTCAGCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCGGGTTCTTTACCTGCTaGAGGGCCGCAGGGATGGTG +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLGFFTC*RAAGMV
Trigger: CACCATCCCTGCGGCCCTGCAGCAGGTAAAGAACCC...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCAGCCTGCCCCAAGATTTCCTaGCAGGGCACAGTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: CEAVGPAHFSMQTGETPACPKIS*QGTVGV
Trigger: CACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCA...GGCTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCACAAATGGCCAGTCAAATGCCGGGCCTGCAGCTaGCACTTCTTCTTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: LHAQTVDCCPGLHKWPVKCRACS*HFFLWN
Trigger: GTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCA...TTTGACTGGCCATTTGTGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCAATGTTCCGGAATAAGGCGCTGCCGGGCCTaGAGCTGCCACTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PGSPGGTTCRSAGQCSGIRRCRA*SCHFFL
Trigger: CAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCT...TATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCACACGTAGACGCTGCCTCTTCCTaGGGGCGAGGCGCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: LIHLVCDVGVQGQHLAHVDAASS*GRGAAG
Trigger: CCCGGCAGCGCCTCGCCCGCAGGAAGAGGCAGCGTC...TACGTGTGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCACTGATCTGCACAATCTaGCACGGAAGGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: PTRALGTRLVSEPNLREPLICTI*HGRSRM
Trigger: CATCCTGGACCTTCCGTGGCAGATTGTGCAGATCAG...TGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGGGACCCGATTTACCTTaGGATACGAAGCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQGPDLP*DTKHPP
Trigger: AGGAGGGTGCTTCGTATCGCAAGGTAAATCGGGTCC...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CATGAACTCGCCCCTCCACTGCCAGGCCATCTTCCGCTGGCAGTTTGCTCCAGGCGCTTTGTGGGCCTGTaGGTGGTGGTACAGGTAGAT +
Preference number: 4 (lower is better)
Translates to: HELAPPLPGHLPLAVCSRRFVGL*VVVQVD
Trigger: ATCTACCTGTACCACCACGCACAGGCCCACAAAGCG...CCTGGAGCAAACTGCCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGTTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GCTCTGCTGAGTACAGGGCGCCAAGGCTGGGCATCTGGTTGCTGCGCACAGTGTCGCTTTGTGGGCCTGTaGGTGGTGGTACAGGTAGAT +
Preference number: 4 (lower is better)
Translates to: ALLSTGRQGWASGCCAQCRFVGL*VVVQVD
Trigger: ATCTACCTGTACCACCACGCACAGGCCCACAAAGCG...ACACTGTGCGCAGCAACCAGATGCCCAGCCTTGGCGCCCTGTACTCAGCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCTGGGCATCTGGTTGCTaGGCACAGTGTCCAGCACAA +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRWASGC*AQCPAQ
Trigger: TTGTGCTGGACACTGTGCGCAGCAACCAGATGCCCA...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCCTCCAGATCGCTGGATGGCTCTaGAGATGGTCTTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: IVAGRGTGSLTTRDHVLQIAGWL*RWSSGQ
Trigger: CTGACCTGAAGACCATCTGCAGAGCCATCCAGCGAT...CTGGAGGACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ACACAGGTCCAGGTCGCGGCAGAAGTTACAGCTGCGGCAGATGACCTCAGGAAGTCCTCCAGGGAGGCCTaGTGGATCACGTCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: TQVQVAAEVTAAADDLRKSSREA*WITSKL
Trigger: CAGCTTCGACGTGATCCAGCAGGCCTCCCTGGAGGA...CTTCCTGAGGTCATCTGCCGCAGCTGTAACTTCTGCCGCGACCTGGACCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCATCCTCTGCTCCCCCTaGTTTCTGGGAGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRILCSP*FLGVLQ
Trigger: CTGCAAGACTCCCAGAAAGCAGGGGGAGCAGAGGAT...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCTTCCTGCTCATCCTCTaGTCCCCCTGCTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLFLLIL*SPCFLG
Trigger: TCCCAGAAAGCAGGGGGAGCAGAGGATGAGCAGGAA...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ATATACCATCTGTGTCCAGCTCTAAGGGCCTCCCAATCTGCTCGATCAGCTCCCTCCTCCTCACGGGGGTaGTCCCTGGAGCACTGCGCC +
Preference number: 4 (lower is better)
Translates to: IYHLCPALRASQSARSAPSSSRG*SLEHCA
Trigger: GGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGA...GGGAGCTGATCGAGCAGATTGGGAGGCCCTTAGAGCTGGACACAGATGGTATAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GCTCAGCCTGATGCAGTGCAAGTCACTGCCAACGAGCGCCCACAGCCTGAACAGAGCTGTGGGTTCTTCTaGAGCAGCCACTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: AQPDAVQVTANERPQPEQSCGFF*SSHSRV
Trigger: GACCCTGGAGTGGCTGCTGCAGAAGAACCCACAGCT...CTGTTCAGGCTGTGGGCGCTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCCCCACCAGGTGTGGTaGAGGAAGCAACAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLPHQVW*RKQQRP
Trigger: AGGCCTCTGTTGCTTCCTGCACCACACCTGGTGGGG...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCCCCACCAGGTGTGGTaGAGGAAGCAACAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ATEAWKSIHCVRNGAQGTPHQVW*RKQQRP
Trigger: AGGCCTCTGTTGCTTCCTGCACCACACCTGGTGGGG...AGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCAGTCCAGATCCTCTTTaGGGACAGTCTCCACTTTTG +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGSPDPL*GQSPLL
Trigger: CAAAAGTGGAGACTGTCCCCAAAGAGGATCTGGACT...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACAAGGATCTTCAGGTCAATaGAGAGGCGGATGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: GAAGPAAATSSCGTGARQGSSGQ*RGGCGR
Trigger: CCTACCACATCCGCCTCTCCATTGACCTGAAGATCC...TTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGGGAACTTCTCTGACTCCAGCTGGTGCTGGATCCGATGGTATTCGCTGCGACCTGAGGCAGTCCATGTaGATGCACTGGGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: GGTSLTPAGAGSDGIRCDLRQSM*MHWGAL
Trigger: CAAGGCGCCCCAGTGCATCCACATGGACTGCCTCAG...GTCGCAGCGAATACCATCGGATCCAGCACCAGCTGGAGTCAGAGAAGTTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp TCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGGGGCTGCTCCGTaGCCATCCGGCACATGTCCT +
Preference number: 4 (lower is better)
Translates to: SRAGLLSSKWEPGRTGNISGAAP*PSGTCP
Trigger: AGGACATGTGCCGGATGGCCACGGAGCAGCCCCAGA...GATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp AGGTGCTCAAGAGCAAAGGTCTCTGCTTCCCAGCCTGAAAGGTGCCTCACCAGCTACGTGGCCAGAGTCTaGGGCTGCTCCGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: RCSRAKVSASQPERCLTSYVARV*GCSVAI
Trigger: GATGGCCACGGAGCAGCCCCAGACTCTGGCCACGTA...GCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAGACCTTTGCTCTTGAGCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCACAGGCAGCACAGGTaGCTTCGTCCACCATGGCAG +
Preference number: 4 (lower is better)
Translates to: ATEAWKSIHCVRNGAQGTHRQHR*LRPPWQ
Trigger: CTGCCATGGTGGACGAAGCCACCTGTGCTGCCTGTG...AGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GGCATGAACTCGCCCCTCCACTGCCAGGCCATCTTCCGCTGGCAGTTTGCTCCAGACTCCAGCTGGTGCTaGATCCGATGGTATTCGCTG +
Preference number: 4 (lower is better)
Translates to: GMNSPLHCQAIFRWQFAPDSSWC*IRWYSL
Trigger: CAGCGAATACCATCGGATCCAGCACCAGCTGGAGTC...TGGAGCAAACTGCCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGTTCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp ACACAGGTCCAGGTCGCGGCAGAAGTTACAGCTGCGGCAGATGACCTCAGGAAGATGAAAGGCCCGAGCTaGCCCCTCTGGGAACAAGGG +
Preference number: 4 (lower is better)
Translates to: TQVQVAAEVTAAADDLRKMKGPS*PLWEQG
Trigger: CCCTTGTTCCCAGAGGGGCCAGCTCGGGCCTTTCAT...CTTCCTGAGGTCATCTGCCGCAGCTGTAACTTCTGCCGCGACCTGGACCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGTCTTGCCTTCTTCCTTaGAGGCTGGAAGAATCATGG +
Preference number: 4 (lower is better)
Translates to: ALAASLTACFFRCSGEARSCLLP*RLEESW
Trigger: CCATGATTCTTCCAGCCTCCAAGGAAGAAGGCAAGA...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGGCTCTGCTTGGAAAATaGCAAGTGGGATGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQALLGK*QVGWPS
Trigger: AGAGGGCCATCCCACTTGCCATTTTCCAAGCAGAGC...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320574.10
CDS-3UTR CCA 90 bp GGCCTGCACCATCAGCAAGGCCTCACACAGAGTGCCAGAGCCCTTCCGCAGCACAGTGCTTCCTCACCGTaGGCTCTGCTTGGAAAATGG +
Preference number: 4 (lower is better)
Translates to: GLHHQQGLTQSARALPQHSASSP*ALLGKW
Trigger: CCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACT...GTGCTGCGGAAGGGCTCTGGCACTCTGTGTGAGGCCTTGCTGATGGTGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CCTCCGGGTCTAGCTCCACGGGATCATAGCCTAGCTTGGCCTTGGCGGCCGCCTTTTGACACGTGGCACTaGGTTCTTTACCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PPGLAPRDHSLAWPWRPPFDTWH*VLYLLQ
Trigger: CTGCAGCAGGTAAAGAACCCAGTGCCACGTGTCAAA...AGGCGGCCGCCAAGGCCAAGCTAGGCTATGATCCCGTGGAGCTAGACCCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGGCCATTCCTCCTGGCTaGTTCCCAGGGCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: AGLLSSKWEPGRTGNISEAIPPG*FPGREA
Trigger: AGCCTCCCGCCCTGGGAACCAGCCAGGAGGAATGGC...CTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTAGCTCCCCAGCCCCGTaGCAGGACCATCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: RFSRVRVWIPGETSPQTASSPAP*QDHPGW
Trigger: CCATCCGGGATGGTCCTGCCACGGGGCTGGGGAGCT...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGCTGAACAGGCCGGCCTaGCTGGTCTCGCTGATCTGC +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVLNRPA*LVSLIC
Trigger: GCAGATCAGCGAGACCAGCCAGGCCGGCCTGTTCAG...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAATGGCGGATACTCCCTaGTTCCAGGTAGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: PTRALGTRLVSEPNLREPMADTP*FQVAEL
Trigger: CAGTTCAGCTACCTGGAACCAGGGAGTATCCGCCAT...TGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCTTGTAGGCGAGCAGGAATCGCTGGATGGCTCTGCAGATGGTCTTCAGGTCAGACAGGGCGCCAAGGCTaGGCATCTGGTTGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: PCRRAGIAGWLCRWSSGQTGRQG*ASGCCA
Trigger: TGCGCAGCAACCAGATGCCCAGCCTTGGCGCCCTGT...CTGACCTGAAGACCATCTGCAGAGCCATCCAGCGATTCCTGCTCGCCTACAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGCAGGAATCGCTGGATaGCTCTGCAGATGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PTRALGTRLVSEPNLREPAGIAG*LCRWSS
Trigger: TGAAGACCATCTGCAGAGCCATCCAGCGATTCCTGC...TGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACATGCGCCGGGCTCCATaGCGCTGCCAGTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNMRRAP*RCQSRT
Trigger: GGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCAT...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCGGTCGGAGCCGAATGTaGAGATGTCCTCTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRGRSRM*RCPLVG
Trigger: ACCTACCAGAGGACATCTCCACATTCGGCTCCGACC...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGGTCGGAGCCGAATGTaGAGATGTCCTCTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLGRSRM*RCPLVG
Trigger: ACCTACCAGAGGACATCTCCACATTCGGCTCCGACC...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGTTGTGGCGCTGGAGGTaGCGGGCAAAGAAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: DELQGRVIEQQVGTGEDRLWRWR*RAKKRS
Trigger: CGACCTCTTCTTTGCCCGCCACCTCCAGCGCCACAA...CCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCCAGGCTTATTGAAGTCACAGGCAGCACAGGTGGCTTCGTCCACCATGGCAGACAGCCAGAGCAGGTaGTTGTGGCGCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: APGLLKSQAAQVASSTMADSQSR*LWRWRW
Trigger: CCACCTCCAGCGCCACAACCACCTGCTCTGGCTGTC...TGCCATGGTGGACGAAGCCACCTGTGCTGCCTGTGACTTCAATAAGCCTGGAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCTGTCTCATCGTAGCTaGCCGGGGCACTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VQEATEAWKSIHCVRNGALSHRS*PGHWQP
Trigger: AGGCTGCCAGTGCCCCGGCCAGCTACGATGAGACAG...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGCATGAACTCGCCCCTCCACTGCCAGGCCATCTTCCGCTGGCAGTTTGCTCCAACTCCACGTAAGCGATaGCATCTTCCACACGGCGCT +
Preference number: 4 (lower is better)
Translates to: GMNSPLHCQAIFRWQFAPTPRKR*HLPHGA
Trigger: AGCGCCGTGTGGAAGATGCCATCGCTTACGTGGAGT...TGGAGCAAACTGCCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGTTCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCCTAATGGCCCAGCTGTaGGTTCTTCTGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLLMAQL*VLLQQP
Trigger: TGGCTGCTGCAGAAGAACCCACAGCTGGGCCATTAG...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTTGGCATCAGGAGGCCTaGCACGGACGCAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: RAGLLSSKWEPGRTGNISWHQEA*HGRRGT
Trigger: GGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCA...AGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AGGTGCTCAAGAGCAAAGGTCTCTGCTTCCCAGCCTGAAAGGTGCCTCACCAGCACGGGGATGTGGCCTTaGCATCAGGAGGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: RCSRAKVSASQPERCLTSTGMWP*HQEAWH
Trigger: GTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT...GCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAGACCTTTGCTCTTGAGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCACCAGCGTCATCTCGATGGCAGAGGAGTCGTAGGGCGCCTGACAGTTGGAGCAGTCAGGGTGGTCAGTaGTCTGGTCACTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: PPASSRWQRSRRAPDSWSSQGGQ*SGHWKH
Trigger: GTGCTTCCAGTGACCAGACCACTGACCACCCTGACT...GCTCCAACTGTCAGGCGCCCTACGACTCCTCTGCCATCGAGATGACGCTGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCCACACAGATAGGCACCCCCGTTCCCTGGCCTaGGGTCACAGGTTTGGACAG +
Preference number: 4 (lower is better)
Translates to: ALPVQDPIVDLVSHTDRHPRSLA*GHRFGQ
Trigger: CTGTCCAAACCTGTGACCCCAGGCCAGGGAACGGGG...GTGCCTATCTGTGTGGCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCTCCACGTTGGATTCCTCCGCCTCTTCCTCCTCCTCCCCATCTCTTTCCTCCTCCACCCCACCAGGTGTaGTGCAGGAAGCAACAGAGG +
Preference number: 4 (lower is better)
Translates to: PPRWIPPPLPPPPHLFPPPPHQV*CRKQQR
Trigger: CCTCTGTTGCTTCCTGCACCACACCTGGTGGGGTGG...AGGAGGAAAGAGATGGGGAGGAGGAGGAAGAGGCGGAGGAATCCAACGTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCGCCTCAGACAGTAGATaGCAGGGACAAACTAAGGCT +
Preference number: 4 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLASDSR*QGQTKA
Trigger: AGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGC...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GAAGCACGTAGGAGCGGCAGGGGTCTCGGAACTGGGCCTCCTCGGAGAACTCGCAAACTCGCCACACAGTaGTCTCTGGCTCTGCCATTA +
Preference number: 4 (lower is better)
Translates to: EARRSGRGLGTGPPRRTRKLATQ*SLALPL
Trigger: TAATGGCAGAGCCAGAGACCACTGTGTGGCGAGTTT...GCGAGTTCTCCGAGGAGGCCCAGTTCCGAGACCCCTGCCGCTCCTACGTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR CCA 90 bp AACCCCAGACTCGAGGGCCTCCACGTGGCCCCCGACGTAGGTCTCAGAGTCCAGAAATGGCAAGTGGGATaGCCCTGGGTAAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: NPRLEGLHVAPDVGLRVQKWQVG*PWVRKT
Trigger: TGTCTTCCTTACCCAGGGCCATCCCACTTGCCATTT...CTGGACTCTGAGACCTACGTCGGGGGCCACGTGGAGGCCCTCGAGTCTGGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CAA 72 bp ATCTGCTCGATCAGCTCCCGTGCCTGGGTGATGATGTaGGCCCCTGTGAAGCAGACGATGCCAGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: ICSISSRAWVMM*APVKQTMPAIS
Trigger: GGAGATGGCTGGCATCGTCTGCTTCACAGGGGCCAACATCATCACCCAGGCACGGGAGCTGATCGAGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGTACGCGTCGCTGGCGTaGTCCTGCTCCCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVYASLA*SCSLFF
Trigger: GAAGAACAGGGAGCAGGATCACGCCAGCGACGCGTA...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp CCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCAATGTTCCGGAATATACGCGTCGCTGGCGTaGTCCTGCTCCCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PGSPGGTTCRSAGQCSGIYASLA*SCSLFF
Trigger: GAAGAACAGGGAGCAGGATCACGCCAGCGACGCGTA...TATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCCCTCTTCACCCACCTaGGGCAGTCCATGTGGATGC +
Preference number: 4 (lower is better)
Translates to: LQGRVIEQQVGTGEDRKHPSSPT*GSPCGC
Trigger: GCATCCACATGGACTGCCTCAGGTGGGTGAAGAGGG...ATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCCTCTTCAAAGTTGGTaGCTTGCTCCACAGGCACTT +
Preference number: 4 (lower is better)
Translates to: AQLQYTGMLVSFTPRHFRPLQSW*LAPQAL
Trigger: AAGTGCCTGTGGAGCAAGTCACCAACTTTGAAGAGG...CCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CTGCTGGATCACGTCGAAGCTGATCCCCATGCTGTCGGCCCCCTCCATGTCGTTGAGCCCCCTTGCGCATaGCATAGCCATAGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: LLDHVEADPHAVGPLHVVEPPCA*HSHRRS
Trigger: ACTCCTTCTATGGCTATGTCATGCGCAAGGGGGCTC...AACGACATGGAGGGGGCCGACAGCATGGGGATCAGCTTCGACGTGATCCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAACGGTTCTCAGAGATaGGCTCGAATAGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGANGSQR*ARIAQS
Trigger: ACTCTGAGCTATTCGAGCTCATCTCTGAGAACCGTT...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GTCTCCCGCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCAAACGGTTCTCAGAGATaGGCTCGAATAGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: VSRAAAVHRHAGLLHPAANGSQR*ARIAQS
Trigger: ACTCTGAGCTATTCGAGCTCATCTCTGAGAACCGTT...TGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGCGGGCTTGCGGGAGATaGTGTAGCGGCAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQRACGR*CSGNSA
Trigger: GGCTGAGTTGCCGCTACATCATCTCCCGCAAGCCCG...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACAGGCCTCGGCCATCGTaGCCTGTCTCCTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNRPRPS*PVSCPP
Trigger: TGGAGGGCAGGAGACAGGTCACGATGGCCGAGGCCT...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGCCTCGGACTGTCTTCTaGGGCCTCGGCCATCGTGAC +
Preference number: 4 (lower is better)
Translates to: AGLLSSKWEPGRTGNISEPRTVF*GLGHRD
Trigger: GTCACGATGGCCGAGGCCTCAGAAGACAGTCCGAGG...CTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GGAAGCCTATCTCCTGCTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCATCACCAGCTGTTTATTaGCCACACACACACAGCCCA +
Preference number: 4 (lower is better)
Translates to: GSLSPAACSDRGLLPGPPSPAVY*PHTHSP
Trigger: TGGGCTGTGTGTGTGTGGTCAATAAACAGCTGGTGA...TGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAGCAGGAGATAGGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp TCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCCTGGTTCCAGGTAGCTaGACTGGGCCAGAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: SRAGLLSSKWEPGRTGNILVPGS*TGPESA
Trigger: TGCGCTCTCTGGCCCAGTTCAGCTACCTGGAACCAG...GATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACTGGACTGAACAGCGATaGGTGTGGGCCCCCGGCGCT +
Preference number: 4 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNWTEQR*VWAPGA
Trigger: AGCGCCGGGGGCCCACACTCATCGCTGTTCAGTCCA...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGGTCATCGAACTCCATaGCAAGACAGTTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: APWSTAPQPVLHAVVHGHGHRTP*QDSCHQ
Trigger: CTGATGACAACTGTCTTGTCATGGAGTTCGATGACC...GTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCAACAGCCTGAACTGTTaGTCTCAACAGTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLNSLNC*SQQWLG
Trigger: ACCAAGCCACTGTTGAGATCAACAGTTCAGGCTGTT...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCTCCGGGTCTAGCTCCACGGGATCATAGCCTAGCTTGGCCTTGGCGGCCGCCTAACAGCCTGAACTGTTaGTCTCAACAGTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: PPGLAPRDHSLAWPWRPPNSLNC*SQQWLG
Trigger: ACCAAGCCACTGTTGAGATCAACAGTTCAGGCTGTT...AGGCGGCCGCCAAGGCCAAGCTAGGCTATGATCCCGTGGAGCTAGACCCGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp TCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCATGTCGTTGACATGGTaGGACTGGAGAATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SLTACFFRCSGEARATSCMSLTW*DWRMVL
Trigger: CAACACCATTCTCCAGTCTCACCATGTCAACGACAT...GCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AACCCCAGACTCGAGGGCCTCCACGTGGCCCCCGACGTAGGTCTCAGAGTCCAGATGTCGTTGACATGGTaGGACTGGAGAATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: NPRLEGLHVAPDVGLRVQMSLTW*DWRMVL
Trigger: CAACACCATTCTCCAGTCTCACCATGTCAACGACAT...CTGGACTCTGAGACCTACGTCGGGGGCCACGTGGAGGCCCTCGAGTCTGGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp TTTCCTGAGGCTGATAGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCGGATCACGTCGAAGCTaGTCCCCATGCTGTCGGCCC +
Preference number: 4 (lower is better)
Translates to: FPEADRGFPLDPAPNKQGGSRRS*SPCCRP
Trigger: GGGCCGACAGCATGGGGATCAGCTTCGACGTGATCC...GCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCTATCAGCCTCAGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AACCCCAGACTCGAGGGCCTCCACGTGGCCCCCGACGTAGGTCTCAGAGTCCAGATGGAAGGTCTCCTTTaGATGGATGCTGCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: NPRLEGLHVAPDVGLRVQMEGLL*MDAAGD
Trigger: ATCACCAGCAGCATCCATTCAAAGGAGACCTTCCAT...CTGGACTCTGAGACCTACGTCGGGGGCCACGTGGAGGCCCTCGAGTCTGGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp TCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCACGCTGAAACAATCATaGGGAAGTAGTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLTACFFRCSGEARATSCTLKQS*GSSSGR
Trigger: CCTGCCAGAACTACTTCCTCATGATTGTTTCAGCGT...GCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCAATCCTGAGAGAAGGTaGTCATTCCGGGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRNPERR*SFREGL
Trigger: GAGCCCTTCCCGGAATGATCACCTTCTCTCAGGATT...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCGACAGGAAACATCTCTaGGAGCTCAGTGGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRDRKHL*ELSGVP
Trigger: CGGAACTCCACTGAGCTCTCAGAGATGTTTCCTGTC...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGATTGGAGCAGAGCCACTaGGGCAGGACCGCCCCATCC +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRLEQSH*GRTAPS
Trigger: GGATGGGGCGGTCCTGCCTCAGTGGCTCTGCTCCAA...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCCCTGGGTGTGGATGGTaGGGGCGAAGTCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: AHVFDELQGRVIEQQVGTPGCGW*GRSLPR
Trigger: GCGCGGGAGACTTCGCCCTCACCATCCACACCCAGG...GGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGCACAAACTGCTCCTGTaGGGCTGTGGGGCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQHKLLL*GCGASP
Trigger: TGGGCTGGCCCCACAGCCTCACAGGAGCAGTTTGTG...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GTCTCCCGCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCACGTCTCAATGTCAAATaGCAAAACCACAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: VSRAAAVHRHAGLLHPAARLNVK*QNHRVR
Trigger: CCTGACCCTGTGGTTTTGGCATTTGACATTGAGACG...TGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGCAGACCGTGGACTGCTaGCCGGGCCTCCACAAATGG +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQQTVDC*PGLHKW
Trigger: CCATTTGTGGAGGCCCGGGCAGCAGTCCACGGTCTG...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR GCA 90 bp CTGGGTGATGATGTTGGCCCCTGTGAAGCAGACGATGCCAGCCATCTCCATGGAAGGCCTCACACAGAGTaGCAGAGCCCTTCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: LGDDVGPCEADDASHLHGRPHTE*QSPSAA
Trigger: TGCTGCGGAAGGGCTCTGGCACTCTGTGTGAGGCCT...TCCATGGAGATGGCTGGCATCGTCTGCTTCACAGGGGCCAACATCATCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp ACTCGCCCCTCCACTGCCAGGCCATCTTCCGCTGGCAGTTTGCTCCAGGCTTATGTCTTCTCAACCCGCTaGAGCAGGAAGTCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: TRPSTARPSSAGSLLQAYVFSTR*SRKSKA
Trigger: CGCCTTTGACTTCCTGCTGCAGCGGGTTGAGAAGAC...ATAAGCCTGGAGCAAACTGCCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CTGCAGCAGCCACTCCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCCTTCCGCTGGCAGTTTaGTCCAGGCTTATTGAAGTC +
Preference number: 4 (lower is better)
Translates to: LQQPLQGLQEVRHAVVLGLPLAV*SRLIEV
Trigger: GACTTCAATAAGCCTGGAGCAAACTGCCAGCGGAAG...GCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGGAGTGGCTGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGTGAACTCGCCCCTCCACTaGCAGGCCATCTTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PTSTRRSRSRFSLFTWFVNSPLH*QAIFRW
Trigger: CCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGTT...CACAAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCTCTGACTCCAGCTGGTaGTGGATCCGATGGTATTCG +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLSDSSW*WIRWYS
Trigger: CGAATACCATCGGATCCAGCACCAGCTGGAGTCAGA...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGTGTTCCTGGAAGGGCCTCCCAATCTaGTCGATCAGCTCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: PSMSGADSSALISLMCSWKGLPI*SISSRA
Trigger: GGCACGGGAGCTGATCGAGCAGATTGGGAGGCCCTT...CCAGGAACACATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGCCCAGGGCGGGAGGCTaGCCCAAGATTTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TYLMNSRAGLLSSKWEPGPRAGG*PKISCQ
Trigger: CTGGCAGGAAATCTTGGGGCAGCCTCCCGCCCTGGG...CCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTTGCCGGGCCTGCAGCTaGCACTTCTTCTTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: ATEAWKSIHCVRNGAQGTCRACS*HFFLWN
Trigger: GTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCA...AGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGTGCCTGAGCACACCCTCTaGCGACTCCAGACGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PTSTRRSRSRFSLFTWFVPEHTL*RLQTLP
Trigger: AGGCAGCGTCTGGAGTCGGCAGAGGGTGTGCTCAGG...CACAAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCTGCAGTGCAAGTCACTaGCAACGAGCGCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: VQEATEAWKSIHCVRNGACSASH*QRAPTA
Trigger: GGCTGTGGGCGCTCGTTGGCAGTGACTTGCACTGCA...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCGGACCCGATTTACCTTaGGATACGAAGCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRGPDLP*DTKHPP
Trigger: AGGAGGGTGCTTCGTATCGCAAGGTAAATCGGGTCC...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AGGCTGCCCCAAGATTTCCTGCCAGGGCACAGTCGGCGTGAGGTCCTGGGACTCTCCCAGCCTGAAAGGTaGCTCACCAGCTGTTTATTG +
Preference number: 4 (lower is better)
Translates to: RLPQDFLPGHSRREVLGLSQPER*LTSCLL
Trigger: CAATAAACAGCTGGTGAGGCACCTTTCAGGCTGGGA...GAGTCCCAGGACCTCACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCTTCAGGTCAGTTTCTaGCCGAACTTCGAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: AQLQYTGMLVSFTPRHFRLQVSF*PNFEGV
Trigger: CACACCTTCGAAGTTCGGGCAGAAACTGACCTGAAG...CCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCATCGCTGGATGGCTCTaGAGATGGTCTTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRIAGWL*RWSSGQ
Trigger: CTGACCTGAAGACCATCTGCAGAGCCATCCAGCGAT...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GAGCCATTTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTGCTTGGAAAATGGCGGTAGTGACGGATCATaGGCCGGGCTCCATGGCGCT +
Preference number: 4 (lower is better)
Translates to: EPFPEKVLPHRGLCLENGGSDGS*AGLHGA
Trigger: AGCGCCATGGAGCCCGGCGCATGATCCGTCACTACC...GCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGGAATGTGAAAGTACCTaGTCATCTCGAAGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQECEST*SSRRPA
Trigger: CGCAGGCCTTCGAGATGAGCAGGTACTTTCACATTC...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGTCCTCCAGGGAGGCCTaGTGGATCACGTCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVSSREA*WITSKL
Trigger: CAGCTTCGACGTGATCCAGCAGGCCTCCCTGGAGGA...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCTCGTCCTCATTTTCCTaGTCATCCTCTGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRSSSFS*SSSAPP
Trigger: AGGGGGAGCAGAGGATGAGCAGGAAAATGAGGACGA...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCTCTGCTGAGTACAGGGCGCCAAGGCTGGGCATCTGGTTGCTGCGCACAGTGTGTTCTGGCAGGAGGCTaGCTGTGGCAAAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: ALLSTGRQGWASGCCAQCVLAGG*LWQKLQ
Trigger: TTGCAGTTTTTGCCACAGGCAGCCTCCTGCCAGAAC...ACACTGTGCGCAGCAACCAGATGCCCAGCCTTGGCGCCCTGTACTCAGCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACTGCTCCCTGGAGCACTaGGCCTCAGCCCGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: FDELQGRVIEQQVGTGEDCSLEH*ASARPS
Trigger: TGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCA...GTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACATGCTCCCTGGAGCACTaGGCCTCAGCCCGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LMNSRAGLLSSKWEPGRTCSLEH*ASARPS
Trigger: TGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCA...TGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCTCCTCCTCACGGGGGTaGTCCCTGGAGCACTGCGCC +
Preference number: 4 (lower is better)
Translates to: AHVFDELQGRVIEQQVGTSSSRG*SLEHCA
Trigger: GGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGA...GGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGAGTCTCCCGCGCAGCTaGAGTACACAGGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVSLPRS*STQACW
Trigger: CCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGACT...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AAGACCTGGGTGTGGATGGTGAGGGCGAAGTCTCCCGCGCAGCTGCAGTACACACCAGGAGGTACGACATaGCGTAGTGCTGGGCAATGT +
Preference number: 4 (lower is better)
Translates to: KTWVWMVRAKSPAQLQYTPGGTT*RSAGQC
Trigger: ACATTGCCCAGCACTACGGCATGTCGTACCTCCTGG...TGTGTACTGCAGCTGCGCGGGAGACTTCGCCCTCACCATCCACACCCAGGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAGCTGTGGGTTCTTCTaGAGCAGCCACTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: DELQGRVIEQQVGTGEDRSCGFF*SSHSRV
Trigger: GACCCTGGAGTGGCTGCTGCAGAAGAACCCACAGCT...CCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGCAGCCCATTTCTCCATaGAAACAGGTGAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: PGALRLSPSFMQWYTATMQPISP*KQVRLQ
Trigger: CTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTG...CATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGGTACAGGCAAACACGTaGATGTTCGTAACTATGTCT +
Preference number: 4 (lower is better)
Translates to: TGMWPWHQEAWHGRRGTRVQANT*MFVTMS
Trigger: AGACATAGTTACGAACATGCACGTGTTTGCCTGTAC...CCGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp TCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTATGTATGCACAAACATaGCTACAGGTTCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: SSRGCSLEHCASARPSCSMYAQT*LQVPRG
Trigger: TCCCCGAGGAACCTGTAGGCATGTTTGTGCATACAT...ACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp AAGGTGATCATTCCGGGAAGGGCTCCGACCGCCCCCTCGGCCTCCTGGGAGAGCCTGCGTGCATATGTATaGACAAACATGCCTACAGGT +
Preference number: 4 (lower is better)
Translates to: KVIIPGRAPTAPSASWESLRAYV*TNMPTG
Trigger: ACCTGTAGGCATGTTTGTGCATACATATGCACGCAG...GCTCTCCCAGGAGGCCGAGGGGGCGGTCGGAGCCCTTCCCGGAATGATCACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GATCCCGAAGAGCGCTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGCGCTCCTCAGAGACATaGAGCCGTTGGCTACCACCT +
Preference number: 4 (lower is better)
Translates to: DPEERFVGLCVVVQVDMARSSET*SRWLPP
Trigger: AGGTGGTAGCCAACGGCTCCATGTCTCTGAGGAGCG...CGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAGCGCTCTTCGGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCGGATCTTCAGGTCAATaGAGAGGCGGATGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRGSSGQ*RGGCGR
Trigger: CCTACCACATCCGCCTCTCCATTGACCTGAAGATCC...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp AGGCTGCCCCAAGATTTCCTGCCAGGGCACAGTCGGCGTGAGGTCCTGGGACTCGTGGGTTTGGTCTCCTaGACGTGTTCAAACCACCTT +
Preference number: 4 (lower is better)
Translates to: RLPQDFLPGHSRREVLGLVGLVS*TCSNHL
Trigger: AAGGTGGTTTGAACACGTCCAGGAGACCAAACCCAC...GAGTCCCAGGACCTCACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp TCATATACGCCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGTGCATGCTCAGACCGTaGACTGCTGCCCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SYTPSMSGADSSALISLMCMLRP*TAARAS
Trigger: GGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCA...CATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGGCGTATATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp AGGCTTTCCGGCAGTAATCCGCCAGCCTTCTCTTCTCGTATTTCGCCTGTTCCTTGCATGCTCAGACCGTaGACTGCTGCCCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RLSGSNPPAFSSRISPVPCMLRP*TAARAS
Trigger: GGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCA...AGGAACAGGCGAAATACGAGAAGAGAAGGCTGGCGGATTACTGCCGGAAAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCGATACGAAGCACCCTCCTCCGCTTTAGCGACTCGCTGGTTCACGTAGAACACCTGAGGCAGTCCATGTaGATGCACTGGGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: AIRSTLLRFSDSLVHVEHLRQSM*MHWGAL
Trigger: CAAGGCGCCCCAGTGCATCCACATGGACTGCCTCAG...GTGTTCTACGTGAACCAGCGAGTCGCTAAAGCGGAGGAGGGTGCTTCGTATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGGATACTCCCTGGTTTACGTGGCCAGAGTCTaGGGCTGCTCCGTGGCCATC +
Preference number: 4 (lower is better)
Translates to: LCGPVRGGTGRYGGYSLVYVARV*GCSVAI
Trigger: GATGGCCACGGAGCAGCCCCAGACTCTGGCCACGTA...AACCAGGGAGTATCCGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCGCAAAGATGAATGGGTaGACGTACTTCATGTACAGG +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGAKMNG*TYFMYR
Trigger: CCTGTACATGAAGTACGTCCACCCATTCATCTTTGC...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CACAGTGACAGGGGCTGCTGGGTGAGGCAGCTTTACGAGGCCGAAGTCCTCCATTCTTCCTCAAGGGCGTaGCGCAAGGTCTTCTCAACC +
Preference number: 4 (lower is better)
Translates to: HSDRGCWVRQLYEAEVLHSSSRA*RKVFST
Trigger: GGTTGAGAAGACCTTGCGCCACGCCCTTGAGGAAGA...ATGGAGGACTTCGGCCTCGTAAAGCTGCCTCACCCAGCAGCCCCTGTCACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCGACACTCGATGCGGCTaGGAACGTCCTTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: VQEATEAWKSIHCVRNGADTRCG*ERPSGR
Trigger: CCTCCCTGAAGGACGTTCCCAGCCGCATCGAGTGTC...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCCACACAGATAGGCACGACACTCGATGCGGCTaGGAACGTCCTTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: ALPVQDPIVDLVSHTDRHDTRCG*ERPSGR
Trigger: CCTCCCTGAAGGACGTTCCCAGCCGCATCGAGTGTC...GTGCCTATCTGTGTGGCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCAGGTGGTAGATGAGTaGACACTCGATGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLQVVDE*TLDAAG
Trigger: CCCAGCCGCATCGAGTGTCCACTCATCTACCACCTG...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCAGCCTGATGCAGTGCAAGTCACTGCCAACGAGCGCCCACAGCCTGAACAGTGGTGCTGGATCCGATaGTATTCGCTGCGACTGGCT +
Preference number: 4 (lower is better)
Translates to: AQPDAVQVTANERPQPEQWCWIR*YSLRLA
Trigger: AGCCAGTCGCAGCGAATACCATCGGATCCAGCACCA...CTGTTCAGGCTGTGGGCGCTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CACAGTGACAGGGGCTGCTGGGTGAGGCAGCTTTACGAGGCCGAAGTCCTCCATGACTCCAGCTGGTGCTaGATCCGATGGTATTCGCTG +
Preference number: 4 (lower is better)
Translates to: HSDRGCWVRQLYEAEVLHDSSWC*IRWYSL
Trigger: CAGCGAATACCATCGGATCCAGCACCAGCTGGAGTC...ATGGAGGACTTCGGCCTCGTAAAGCTGCCTCACCCAGCAGCCCCTGTCACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCAATGTTCCGGAATAATGAAAGGCCCGAGCTaGCCCCTCTGGGAACAAGGG +
Preference number: 4 (lower is better)
Translates to: PGSPGGTTCRSAGQCSGIMKGPS*PLWEQG
Trigger: CCCTTGTTCCCAGAGGGGCCAGCTCGGGCCTTTCAT...TATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CCTGATGCAGTGCAAGTCACTGCCAACGAGCGCCCACAGCCTGAACAGGCCGGCTTTCTGGGAAGCTGTTaGGCAGGACGCACCATATAC +
Preference number: 4 (lower is better)
Translates to: PDAVQVTANERPQPEQAGFLGSC*AGRTIY
Trigger: GTATATGGTGCGTCCTGCCCAACAGCTTCCCAGAAA...GCCGGCCTGTTCAGGCTGTGGGCGCTCGTTGGCAGTGACTTGCACTGCATCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGGAGATGGTCACTTTaGGCTTCTTCACATTGGTCG +
Preference number: 4 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGARRWSL*ASSHWS
Trigger: CGACCAATGTGAAGAAGCCCAAAGTGACCATCTCCT...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGTTCAACATGGCGCCTaGGTAGGAGATGGTCACTTT +
Preference number: 4 (lower is better)
Translates to: PTRALGTRLVSEPNLREPVQHGA*VGDGHF
Trigger: AAAGTGACCATCTCCTACCCAGGCGCCATGTTGAAC...TGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCCTCCAGAGGCTGGAAGAATCATaGCAAGGTAGGGCCCATCAA +
Preference number: 4 (lower is better)
Translates to: IVAGRGTGSLTTRDHVLQRLEES*QGRAHQ
Trigger: TTGATGGGCCCTACCTTGCCATGATTCTTCCAGCCT...CTGGAGGACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCATTCTTCCTTGGAGGCTaGAAGAATCATGGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: GHSQPRSRPASSGALARPFFLGG*KNHGKV
Trigger: TACCTTGCCATGATTCTTCCAGCCTCCAAGGAAGAA...TGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TGTCTCATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCGGGGTGTTTGACACGTaGCACTGGGTTCTTTACCTG +
Preference number: 4 (lower is better)
Translates to: CLIVAGRGTGSLTTRDHVGVFDT*HWVLYL
Trigger: CAGGTAAAGAACCCAGTGCCACGTGTCAAACACCCC...GACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGATGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCAGCCTCCTGGGACTCCTCCTaGCTCTCCCAAAGAACTCGC +
Preference number: 4 (lower is better)
Translates to: CEAVGPAHFSMQTGETPASWDSS*LSQRTR
Trigger: GCGAGTTCTTTGGGAGAGCCAGGAGGAGTCCCAGGA...GGCTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTTCCTGGGACTCCTCCTaGCTCTCCCAAAGAACTCGC +
Preference number: 4 (lower is better)
Translates to: ATEAWKSIHCVRNGAQGTSWDSS*LSQRTR
Trigger: GCGAGTTCTTTGGGAGAGCCAGGAGGAGTCCCAGGA...AGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GATCCCGAAGAGCGCTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGTCCTGGGACTCCTCCTaGCTCTCCCAAAGAACTCGC +
Preference number: 4 (lower is better)
Translates to: DPEERFVGLCVVVQVDMASWDSS*LSQRTR
Trigger: GCGAGTTCTTTGGGAGAGCCAGGAGGAGTCCCAGGA...CGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAGCGCTCTTCGGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGTCGGCGTGAGGTCCTaGGACTCCTCCTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNVGVRS*DSSWLS
Trigger: GGAGAGCCAGGAGGAGTCCCAGGACCTCACGCCGAC...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGCCATTCCTCCTGGCTaGTTCCCAGGGCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VFDELQGRVIEQQVGTGEAIPPG*FPGREA
Trigger: AGCCTCCCGCCCTGGGAACCAGCCAGGAGGAATGGC...CTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CGCAAGGTCTTCTCAACCCGCTGCAGCAGGAAGTCAAAGGCGGCAGGATTCATCACAAGCCATTCCTCCTaGCTGGTTCCCAGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: RKVFSTRCSRKSKAAGFITSHSS*LVPRAG
Trigger: TCCCGCCCTGGGAACCAGCCAGGAGGAATGGCTTGT...GATGAATCCTGCCGCCTTTGACTTCCTGCTGCAGCGGGTTGAGAAGACCTTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp TGTAGACCATGTTGGAGCGAGGAAGGACCCGATTTACCTTGCGATACGAAGCACAGCTCCCCAGCCCCGTaGCAGGACCATCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: CRPCWSEEGPDLPCDTKHSSPAP*QDHPGW
Trigger: CCATCCGGGATGGTCCTGCCACGGGGCTGGGGAGCT...GTGCTTCGTATCGCAAGGTAAATCGGGTCCTTCCTCGCTCCAACATGGTCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGTGTCCAGGGACAGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTCTGAACAGGCCGGCCTaGCTGGTCTCGCTGATCTGC +
Preference number: 4 (lower is better)
Translates to: GVQGQHLAHVFDELQGRVLNRPA*LVSLIC
Trigger: GCAGATCAGCGAGACCAGCCAGGCCGGCCTGTTCAG...AACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCTGTCCCTGGACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGGATTGTAGACCATGTTaGAGCGAGGAAGGACCCGAT +
Preference number: 4 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQDCRPC*SEEGPD
Trigger: ATCGGGTCCTTCCTCGCTCCAACATGGTCTACAATC...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CTGCAGCAGCCACTCCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCGATTGTAGACCATGTTaGAGCGAGGAAGGACCCGAT +
Preference number: 4 (lower is better)
Translates to: LQQPLQGLQEVRHAVVLGDCRPC*SEEGPD
Trigger: ATCGGGTCCTTCCTCGCTCCAACATGGTCTACAATC...GCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGGAGTGGCTGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGACAGGGCGCCAAGGCTaGGCATCTGGTTGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQTGRQG*ASGCCA
Trigger: TGCGCAGCAACCAGATGCCCAGCCTTGGCGCCCTGT...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGACAGATAGGCACCAGTaGGAATTCCTCCAAGACAGG +
Preference number: 4 (lower is better)
Translates to: PGALRLSPSFMQWYTATMTDRHQ*EFLQDR
Trigger: CCTGTCTTGGAGGAATTCCCACTGGTGCCTATCTGT...CATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CTGCTGGATCACGTCGAAGCTGATCCCCATGCTGTCGGCCCCCTCCATGTCGTTGGTCGGAGCCGAATGTaGAGATGTCCTCTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: LLDHVEADPHAVGPLHVVGRSRM*RCPLVG
Trigger: ACCTACCAGAGGACATCTCCACATTCGGCTCCGACC...AACGACATGGAGGGGGCCGACAGCATGGGGATCAGCTTCGACGTGATCCAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGTTGTGGCGCTGGAGGTaGCGGGCAAAGAAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVLWRWR*RAKKRS
Trigger: CGACCTCTTCTTTGCCCGCCACCTCCAGCGCCACAA...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCCAGGCTTATTGAAGTCACAGGCAGCACAGGTGGCTTCGTCCACCATGGCATTGTGGCGCTGGAGGTaGCGGGCAAAGAAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: APGLLKSQAAQVASSTMALWRWR*RAKKRS
Trigger: CGACCTCTTCTTTGCCCGCCACCTCCAGCGCCACAA...TGCCATGGTGGACGAAGCCACCTGTGCTGCCTGTGACTTCAATAAGCCTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp ATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAGGTGGTTGTGGCGCTaGAGGTGGCGGGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: MNSRAGLLSSKWEPGRTGRWLWR*RWRAKK
Trigger: CTTCTTTGCCCGCCACCTCCAGCGCCACAACCACCT...TCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACGTCCAGCCAGTAGTCAGCCACCTTGGCTACAGAGCCATACACCTCTTCCAGAGGTGGTTGTGGCGCTaGAGGTGGCGGGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: HVQPVVSHLGYRAIHLFQRWLWR*RWRAKK
Trigger: CTTCTTTGCCCGCCACCTCCAGCGCCACAACCACCT...CTGGAAGAGGTGTATGGCTCTGTAGCCAAGGTGGCTGACTACTGGCTGGACGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACCAGAGCAGGTGGTTGTaGCGCTGGAGGTGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNQSRWL*RWRWRA
Trigger: TGCCCGCCACCTCCAGCGCCACAACCACCTGCTCTG...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCTCCAGGGAGGCCTGCTaGATCACGTCGAAGCTGATC +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLSREAC*ITSKLI
Trigger: GATCAGCTTCGACGTGATCCAGCAGGCCTCCCTGGA...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGTGCAGGGGTCTCGGAACTaGGCCTCCTCGGAGAACTCG +
Preference number: 4 (lower is better)
Translates to: PTSTRRSRSRFSLFTWFVQGSRN*ASSENS
Trigger: CGAGTTCTCCGAGGAGGCCCAGTTCCGAGACCCCTG...CACAAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCAGGGCGCCTGACAGTTaGAGCAGAGCCACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: VQEATEAWKSIHCVRNGARAPDS*SRATEA
Trigger: TGCCTCAGTGGCTCTGCTCCAACTGTCAGGCGCCCT...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCCAGCGTCATCTCGATaGCAGAGGAGTCGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: VQEATEAWKSIHCVRNGAPASSR*QRSRRA
Trigger: CGCCCTACGACTCCTCTGCCATCGAGATGACGCTGG...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCAGTACACAGGCATGCTaGTCTCCTTCACCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: QGRVIEQQVGTGEDRKHLSTQAC*SPSPRG
Trigger: GCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACT...GAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGTACGCTGATGAAGACCTGGGTGTaGATGGTGAGGGCGAAGTCT +
Preference number: 4 (lower is better)
Translates to: HCASARPSCSGTRPRCTLMKTWV*MVRAKS
Trigger: AGACTTCGCCCTCACCATCCACACCCAGGTCTTCAT...CAGCGTACATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCTGCTGAGTACAGGGCGCCAAGGCTGGGCATCTGGTTGCTGCGCACAGTGTATGAAGACCTGGGTGTaGATGGTGAGGGCGAAGTCT +
Preference number: 4 (lower is better)
Translates to: ALLSTGRQGWASGCCAQCMKTWV*MVRAKS
Trigger: AGACTTCGCCCTCACCATCCACACCCAGGTCTTCAT...ACACTGTGCGCAGCAACCAGATGCCCAGCCTTGGCGCCCTGTACTCAGCAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TGCAGGGTGAAGGCCATCAGCTTCTTCTGTAGAACTTCCACCAGCGTCATCTCGTGGCATCAGGAGGCCTaGCACGGACGCAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: CRVKAISFFCRTSTSVISWHQEA*HGRRGT
Trigger: GGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCA...CGAGATGACGCTGGTGGAAGTTCTACAGAAGAAGCTGATGGCCTTCACCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGGGGTGGTCAGTGGTCTaGTCACTGGAAGCACGGGGA +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVGWSVV*SLEARG
Trigger: TCCCCGTGCTTCCAGTGACCAGACCACTGACCACCC...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCGATACGAAGCACCCTCCTCCGCTTTAGCGACTCGCTGGTTCACGTAGAACACGGGTGGTCAGTGGTCTaGTCACTGGAAGCACGGGGA +
Preference number: 4 (lower is better)
Translates to: AIRSTLLRFSDSLVHVEHGWSVV*SLEARG
Trigger: TCCCCGTGCTTCCAGTGACCAGACCACTGACCACCC...GTGTTCTACGTGAACCAGCGAGTCGCTAAAGCGGAGGAGGGTGCTTCGTATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGTTCCTCCCCGTTCCCTaGCCTGGGGTCACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVFLPVP*PGVTGL
Trigger: CAAACCTGTGACCCCAGGCCAGGGAACGGGGAGGAA...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGCCACCCCACCAGGTGTaGTGCAGGAAGCAACAGAGG +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVPPHQV*CRKQQR
Trigger: CCTCTGTTGCTTCCTGCACCACACCTGGTGGGGTGG...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGAGCCCCACCAGGGCCTTaGGAACCCGTCTCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRAPPGP*EPVSSQ
Trigger: CTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGGC...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACAGTAACGGAACCTGAGTCTCATATACGCCCTCGATGTCTGGCGCTGACAGCTGCCCCACCAGGGCCTTaGGAACCCGTCTCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: TVTEPESHIRPRCLALTAAPPGP*EPVSSQ
Trigger: CTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGGC...AGCTGTCAGCGCCAGACATCGAGGGCGTATATGAGACTCAGGTTCCGTTACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTCACATCGAAAAGTaGCCCTGGTTAGAAAGACTC +
Preference number: 4 (lower is better)
Translates to: SSRGCSLEHCASARPSCSGHIEK*PWLERL
Trigger: GAGTCTTTCTAACCAGGGCCACTTTTCGATGTGACC...ACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR CCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCAGCATGAACCACCGCTaGTGGGTAATGCGAGTAGCT +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRSMNHR*WVMRVA
Trigger: AGCTACTCGCATTACCCACCAGCGGTGGTTCATGCT...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR CCA 90 bp CCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGAACAGAGCAAGACCCTaGAAAGCAGAGCTGTGTACG +
Preference number: 4 (lower is better)
Translates to: PGALRLSPSFMQWYTATMNRARP*KAELCT
Trigger: CGTACACAGCTCTGCTTTCCAGGGTCTTGCTCTGTT...CATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS-3UTR TCA 90 bp TGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCAGCCCTTGAGTGCCGAAACTaGGGAAGTGGCGCCATCATC +
Preference number: 4 (lower is better)
Translates to: CEAVGPAHFSMQTGETPALECRN*GSGAII
Trigger: GATGATGGCGCCACTTCCTCAGTTTCGGCACTCAAG...GGCTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp CCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCAATGTTCCGGAATATCCGTTCCAGGCGCTTaGGTGCCGAAACTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PGSPGGTTCRSAGQCSGISVPGA*VPKLRK
Trigger: CTTCCTCAGTTTCGGCACTCAAGCGCCTGGAACGGA...TATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCCTTGGAGAGAAAAGATaGAACTTCTCGCTCACAACC +
Preference number: 4 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLLGEKR*NFSLTT
Trigger: GGTTGTGAGCGAGAAGTTTCATCTTTTCTCTCCAAG...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp TCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTGTGGAAGGACAGCCTaGTGTAATTTCGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: SLTACFFRCSGEARATSCCGRTA*CNFASN
Trigger: GTTTGAAGCGAAATTACATCAGGCTGTCCTTCCACA...GCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGCCTTGGCGGCCGCCTTaGGATTATGACTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQPWRPP*DYDCPQ
Trigger: CTGTGGGCAGTCATAATCTCAAGGCGGCCGCCAAGG...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp ATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCCTCCAGTGCACAGAGCAAAGATaGATGGGTGGACGTACTTCA +
Preference number: 4 (lower is better)
Translates to: IVAGRGTGSLTTRDHVLQCTEQR*MGGRTS
Trigger: TGAAGTACGTCCACCCATTCATCTTTGCTCTGTGCA...CTGGAGGACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCCGTCCGTCAGCTTATTaGACTCCTGCTCTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRRPSAY*TPALAC
Trigger: ACAAGCAAGAGCAGGAGTTCAATAAGCTGACGGACG...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CATGAACTCGCCCCTCCACTGCCAGGCCATCTTCCGCTGGCAGTTTGCTCCAGGCCTCTTCAAAGTTGGTaGCTTGCTCCACAGGCACTT +
Preference number: 4 (lower is better)
Translates to: HELAPPLPGHLPLAVCSRPLQSW*LAPQAL
Trigger: AAGTGCCTGTGGAGCAAGTCACCAACTTTGAAGAGG...CCTGGAGCAAACTGCCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGTTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp TTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACCGTCCAGGTGGTAGATaGGTGGACACTCGATGCGGC +
Preference number: 4 (lower is better)
Translates to: FDELQGRVIEQQVGTGEDRPGGR*VDTRCG
Trigger: GCCGCATCGAGTGTCCACTCATCTACCACCTGGACG...GTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGGCTGGCAGATGGTGGTaGGACGCTCTTCCACCTTGG +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQAGRWW*DALPPW
Trigger: CCAAGGTGGAAGAGCGTCTCACCACCATCTGCCAGC...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp TGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCAGCCGAGCCCCCTTGCGCATaGCATAGCCATAGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: CEAVGPAHFSMQTGETPAEPPCA*HSHRRS
Trigger: ACTCCTTCTATGGCTATGTCATGCGCAAGGGGGCTC...GGCTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCGGTGACGTAGGTGAGTaGGGACGGCTCAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKIGDVGE*GRLSQL
Trigger: GAGCTGGCTGAGCCGTCCTCACTCACCTACGTCACC...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGGCTTTCCGGCAGTAATCCGCCAGCCTTCTCTTCTCGTATTTCGCCTGTTCCTCGGGCTTGCGGGAGATaGTGTAGCGGCAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: RLSGSNPPAFSSRISPVPRACGR*CSGNSA
Trigger: GGCTGAGTTGCCGCTACATCATCTCCCGCAAGCCCG...AGGAACAGGCGAAATACGAGAAGAGAAGGCTGGCGGATTACTGCCGGAAAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCCATAGAAGGAGTTCAGGATGCACTTGTGGGCCAGCTGCAGCGAGTCATACAGGCCAGTCGGGGTGTTTaGCACGTGGCACTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: AIEGVQDALVGQLQRVIQASRGV*HVALGS
Trigger: AGAACCCAGTGCCACGTGTCAAACACCCCGACTGGC...CTGTATGACTCGCTGCAGCTGGCCCACAAGTGCATCCTGAACTCCTTCTATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp TCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGGGGGATGCTCAGCCTaGTGCAGTGCAAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: SPTSTRRSRSRFSLFTWFGGCSA*CSASHC
Trigger: GCAGTGACTTGCACTGCATCAGGCTGAGCATCCCCC...AAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACTGGGTTCTTTACCTGCTGCAGGGCCGCAGGGATGGTGATGATCTTCTGGATGGGGGATGCTCAGCCTaGTGCAGTGCAAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: HWVLYLLQGRRDGDDLLDGGCSA*CSASHC
Trigger: GCAGTGACTTGCACTGCATCAGGCTGAGCATCCCCC...ATCCAGAAGATCATCACCATCCCTGCGGCCCTGCAGCAGGTAAAGAACCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCAACAGTAACGGAACCTaGGTCTCATATACGCCCTCG +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLNSNGT*VSYTPS
Trigger: CGAGGGCGTATATGAGACTCAGGTTCCGTTACTGTT...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCTCACCAGCTGTTTATTaGCCACACACACACAGCCCA +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLSPAVY*PHTHSP
Trigger: TGGGCTGTGTGTGTGTGGTCAATAAACAGCTGGTGA...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTCTCTGCTTCCCAGCCTaGAAGGTGCCTCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: RAGLLSSKWEPGRTGNISLCFPA*KVPHQL
Trigger: CAGCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAG...AGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGTGCTCTGCTTCCCAGCCTaGAAGGTGCCTCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: PTSTRRSRSRFSLFTWFVLCFPA*KVPHQL
Trigger: CAGCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAG...CACAAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGTGCGCTGTGAGGGGATaGAGATCCCGAAGAGCGCTT +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVCAVRG*RSRRAL
Trigger: AAGCGCTCTTCGGGATCTTCATCCCCTCACAGCGCA...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATTTGACGGCCAGGTTCTaGAGGTCCAGCTCCACACAC +
Preference number: 4 (lower is better)
Translates to: LQGRVIEQQVGTGEDRKHLTARF*RSSSTH
Trigger: GTGTGTGGAGCTGGACCTTCAGAACCTGGCCGTCAA...ATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCTGTTGTGGTACTGGGTaGTCTCCTTCACCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLCCGTG*SPSPSP
Trigger: TGGGCTGGGTGAAGGAGATCACCCAGTACCACAACA...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGTACGCTGAATGGATGCTGCTGGTaGTGTACTCCACGTAAGCGA +
Preference number: 4 (lower is better)
Translates to: HCASARPSCSGTRPRCTLNGCCW*CTPRKR
Trigger: TCGCTTACGTGGAGTACATCACCAGCAGCATCCATT...CAGCGTACATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GAAGCACGTAGGAGCGGCAGGGGTCTCGGAACTGGGCCTCCTCGGAGAACTCGCAGTTCCGAGAGCCTGTaGCTTTCTTCTGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: EARRSGRGLGTGPPRRTRSSESL*LSSESS
Trigger: AGAAGATTCAGAAGAAAGTCACAGGCTCTCGGAACT...GCGAGTTCTCCGAGGAGGCCCAGTTCCGAGACCCCTGCCGCTCCTACGTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCCAGGTCCTGCAGGGTaGAGGCCATCAGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LQGRVIEQQVGTGEDRKHPGPAG*RPSASS
Trigger: AGAAGAAGCTGATGGCCTTCACCCTGCAGGACCTGG...ATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGCCAGGTCCTGCAGGGTaGAGGCCATCAGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVPGPAG*RPSASS
Trigger: AGAAGAAGCTGATGGCCTTCACCCTGCAGGACCTGG...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TCGGTTCAGCTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTCCTGGGTGTGGATGGTaGGGGCGAAGTCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: SVQLIHLVCDVGVQGQHLPGCGW*GRSLPR
Trigger: GCGCGGGAGACTTCGCCCTCACCATCCACACCCAGG...AAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGAAAGCATTCACTGCGTaGGAAACGGCGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVKAFTA*ETAPRA
Trigger: TGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTT...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACAAAGCATTCACTGCGTaGGAAACGGCGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: NSRAGLLSSKWEPGRTGNKAFTA*ETAPRA
Trigger: TGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTT...GTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCACAAACTGCTCCTGTaGGGCTGTGGGGCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKIHKLLL*GCGASP
Trigger: TGGGCTGGCCCCACAGCCTCACAGGAGCAGTTTGTG...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCAAAATCTCGGTAGGATaGATGTTAATGAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGKISVG*MLMSQP
Trigger: AGGCTGGCTCATTAACATGCATCCTACCGAGATTTT...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp AGGGCGGGAGGCTGCCCCAAGATTTCCTGCCAGGGCACAGTCGGCGTGAGGTCCAGTAATCCACTGCACTaGCTAAGCGCTTATCTTCAT +
Preference number: 4 (lower is better)
Translates to: RAGGCPKISCQGTVGVRSSNPLH*LSAYLH
Trigger: ATGAAGATAAGCGCTTAGGCAGTGCAGTGGATTACT...GGACCTCACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCAGCCTCCCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GATCATGCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTATGACACCGCCCCTCTaGAGAACACTGGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: DHAPGSMALPVQDPIVDLMTPPL*RTLESR
Trigger: TCTGCTTTCCAGTGTTCTGCAGAGGGGCGGTGTCAT...AAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCATGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537064.5
CDS-3UTR GCA 90 bp GGAAGCCTATCTCCTGCTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCACGTCTCAATGTCAAATaGCAAAACCACAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GSLSPAACSDRGLLPGPPRLNVK*QNHRVR
Trigger: CCTGACCCTGTGGTTTTGGCATTTGACATTGAGACG...TGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAGCAGGAGATAGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp TCTCTGACTCCAGCTGGTGCTGGATCCGATGGTATTCGCTGCGACTGGCTGGCATGGAAGCCTATCTCCTaGTGCATGCTCAGACCGTGG +
Preference number: 4 (lower is better)
Translates to: SLTPAGAGSDGIRCDWLAWKPIS*CMLRPW
Trigger: CCACGGTCTGAGCATGCAGCAGGAGATAGGCTTCCA...TGCCAGCCAGTCGCAGCGAATACCATCGGATCCAGCACCAGCTGGAGTCAGAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp TCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTAGGCCTCACACAGAGTaGCAGAGCCCTTCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: SPTSTRRSRSRFSLFTWFRPHTE*QSPSAA
Trigger: TGCTGCGGAAGGGCTCTGGCACTCTGTGTGAGGCCT...AAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGTTGGCGTGGAAGGCCTaGACCATCAGCAAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVLAWKA*TISKAS
Trigger: TGAGGCCTTGCTGATGGTGCAGGCCTTCCACGCCAA...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR GCA 90 bp CTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCACAAATGGCCAGTCAAATCTGACTCCAGCTGGTaGTGGATCCGATGGTATTCG +
Preference number: 4 (lower is better)
Translates to: LHAQTVDCCPGLHKWPVKSDSSW*WIRWYS
Trigger: CGAATACCATCGGATCCAGCACCAGCTGGAGTCAGA...TTTGACTGGCCATTTGTGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCAATGTTCCGGAATAGCACCTCCATGTTCTTaGAGCGCTTCACCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: PGSPGGTTCRSAGQCSGIAPPCS*SASPQP
Trigger: CGGCTGAGGTGAAGCGCTGCAAGAACATGGAGGTGC...TATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GTACAGCACGTCCAGCCAGTAGTCAGCCACCTTGGCTACAGAGCCATACACCTCCACTTGTGGGCCAGCTaGAGCGAGTCATACAGCACC +
Preference number: 4 (lower is better)
Translates to: VQHVQPVVSHLGYRAIHLHLWAS*SESYST
Trigger: GGTGCTGTATGACTCGCTGCAGCTGGCCCACAAGTG...GAGGTGTATGGCTCTGTAGCCAAGGTGGCTGACTACTGGCTGGACGTGCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCTCTTCTTCAATTTCTTaGCTTCTTCCTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGSSSIS*LLPWRL
Trigger: CAGCCTCCAAGGAAGAAGGCAAGAAATTGAAGAAGA...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AAGGTGATCATTCCGGGAAGGGCTCCGACCGCCCCCTCGGCCTCCTGGGAGAGCTCTTCTTCAATTTCTTaGCTTCTTCCTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: KVIIPGRAPTAPSASWESSSSIS*LLPWRL
Trigger: CAGCCTCCAAGGAAGAAGGCAAGAAATTGAAGAAGA...GCTCTCCCAGGAGGCCGAGGGGGCGGTCGGAGCCCTTCCCGGAATGATCACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCGATACGAAGCACCCTCCTCCGCTTTAGCGACTCGCTGGTTCACGTAGAACACGCATGTTGGCTGCCTTaGTGTACAGCACGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: AIRSTLLRFSDSLVHVEHACWLP*CTARPA
Trigger: GGCTGGACGTGCTGTACAGCAAGGCAGCCAACATGC...GTGTTCTACGTGAACCAGCGAGTCGCTAAAGCGGAGGAGGGTGCTTCGTATCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCTCCACGTTGGATTCCTCCGCCTCTTCCTCCTCCTCCCCATCTCTTTCCTCCTGTCAGGCATGTTGGCTaGCTTGCTGTACAGCACGTC +
Preference number: 4 (lower is better)
Translates to: PPRWIPPPLPPPPHLFPPVRHVG*LAVQHV
Trigger: GACGTGCTGTACAGCAAGGCAGCCAACATGCCTGAC...AGGAGGAAAGAGATGGGGAGGAGGAGGAAGAGGCGGAGGAATCCAACGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGTCCCAATCCAGAATTaGTCGAATATCAAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: HGDVALASGGLARTQRHPVPIQN*SNIKVL
Trigger: CAAGACTTTGATATTCGAGCAATTCTGGATTGGGAC...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCGATACGAAGCACCCTCCTCCGCTTTAGCGACTCGCTGGTTCACGTAGAACACACTGGGTTCTTTACCTaGTGCAGGGCCGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: AIRSTLLRFSDSLVHVEHTGFFT*CRAAGM
Trigger: CATCCCTGCGGCCCTGCAGCAGGTAAAGAACCCAGT...GTGTTCTACGTGAACCAGCGAGTCGCTAAAGCGGAGGAGGGTGCTTCGTATCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGAGCTGCCCCAAGATTTCCTaGCAGGGCACAGTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: GLLSSKWEPGRTGNISESCPKIS*QGTVGV
Trigger: CACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCA...GCTCTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGAAGGCGCTGCCGGGCCTaGAGCTGCCACTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRRRCRA*SCHFFL
Trigger: CAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCT...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCAGGTGCACCAGGGCCCGGAACAGTAACGGAACCTGAGTCTCATATACGCCCTCTCAGCCTGATGCAGTaGAAGTCACTGCCAACGAGC +
Preference number: 4 (lower is better)
Translates to: PGAPGPGTVTEPESHIRPLSLMQ*KSLPTS
Trigger: GCTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAG...AGGGCGTATATGAGACTCAGGTTCCGTTACTGTTCCGGGCCCTGGTGCACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCTGGGCATCTGGTTGCTGCGCACAGTGTCCAGCACAAAGACGGATGCCCTGCGTCCCAGCCTGAAAGGTaGCTCACCAGCTGTTTATTG +
Preference number: 4 (lower is better)
Translates to: AGHLVAAHSVQHKDGCPASQPER*LTSCLL
Trigger: CAATAAACAGCTGGTGAGGCACCTTTCAGGCTGGGA...CGCAGGGCATCCGTCTTTGTGCTGGACACTGTGCGCAGCAACCAGATGCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ACAAGACAGTTGTCATCAGCCTCCTTTCCACCCAGGTCAGGGCGGGCTGTAGGGTGGGCATCTGGTTGCTaGGCACAGTGTCCAGCACAA +
Preference number: 4 (lower is better)
Translates to: TRQLSSASFPPRSGRAVGWASGC*AQCPAQ
Trigger: TTGTGCTGGACACTGTGCGCAGCAACCAGATGCCCA...CCCTACAGCCCGCCCTGACCTGGGTGGAAAGGAGGCTGATGACAACTGTCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCCTTCAGGTCAGTTTCTaGCCGAACTTCGAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLLQVSF*PNFEGV
Trigger: CACACCTTCGAAGTTCGGGCAGAAACTGACCTGAAG...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CGGTTCTCAGAGATGAGCTCGAATAGCTCAGAGTCAGGCATGTTGGCTGCCTTGGGTAGTGACGGATCATaGGCCGGGCTCCATGGCGCT +
Preference number: 4 (lower is better)
Translates to: RFSEMSSNSSESGMLAALGSDGS*AGLHGA
Trigger: AGCGCCATGGAGCCCGGCGCATGATCCGTCACTACC...CAAGGCAGCCAACATGCCTGACTCTGAGCTATTCGAGCTCATCTCTGAGAACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGAGGTAGTGACGGATCATaGGCCGGGCTCCATGGCGCT +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRGSDGS*AGLHGA
Trigger: AGCGCCATGGAGCCCGGCGCATGATCCGTCACTACC...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACTCCTCCAGGGAGGCCTaGTGGATCACGTCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: FDELQGRVIEQQVGTGEDSSREA*WITSKL
Trigger: CAGCTTCGACGTGATCCAGCAGGCCTCCCTGGAGGA...GTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATTCAGCCCGTCCTTCATaGAGTGGTACACGGCCACGA +
Preference number: 4 (lower is better)
Translates to: LQGRVIEQQVGTGEDRKHSARPS*SGTRPR
Trigger: TCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGA...ATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTCCTCCTCACGGGGGTaGTCCCTGGAGCACTGCGCC +
Preference number: 4 (lower is better)
Translates to: STLHTYLMNSRAGLLSSKSSSRG*SLEHCA
Trigger: GGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGA...CTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTAGGCAGACCAGGTCCTaGAGGGTGAAGGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: SPTSTRRSRSRFSLFTWFRQTRS*RVKAIS
Trigger: GCTGATGGCCTTCACCCTGCAGGACCTGGTCTGCCT...AAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTGCCTCGCTCACGGCCTaGTTCTTCAGGTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RFSRVRVWIPGETSPQTAASLTA*FFRCSG
Trigger: GCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGC...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GATCATGCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTTGGAAAAGCATTCACTaGGTGAGAAACGGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: DHAPGSMALPVQDPIVDLWKSIH*VRNGAQ
Trigger: CTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCA...AAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCATGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTGCTGGATCACGTCGAAGCTGATCCCCATGCTGTCGGCCCCCTCCATGTCGTTGTGAAGGACAAGGGCTaGAGTGAGCCAAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LLDHVEADPHAVGPLHVVVKDKG*SEPKVR
Trigger: CCTCACTTTTGGCTCACTGCAGCCCTTGTCCTTCAC...AACGACATGGAGGGGGCCGACAGCATGGGGATCAGCTTCGACGTGATCCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCTCAGCCTGATGCAGTGCAAGTCACTGCCAACGAGCGCCCACAGCCTGAACAGACTGGCAACCGTCAGTaGTTCCCTTTCACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: AQPDAVQVTANERPQPEQTGNRQ*FPFTGG
Trigger: TCCTCCAGTGAAAGGGAAGCACTGACGGTTGCCAGT...CTGTTCAGGCTGTGGGCGCTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GGAAGCCTATCTCCTGCTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCAAGTCCAGATCCTCTTTaGGGACAGTCTCCACTTTTG +
Preference number: 4 (lower is better)
Translates to: GSLSPAACSDRGLLPGPPSPDPL*GQSPLL
Trigger: CAAAAGTGGAGACTGTCCCCAAAGAGGATCTGGACT...TGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAGCAGGAGATAGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp TTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACACTGTGTACGCGTCGCTaGCGTGATCCTGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: LMNSRAGLLSSKWEPGRTLCTRR*RDPAPC
Trigger: ACAGGGAGCAGGATCACGCCAGCGACGCGTACACAG...TGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGACAATGTTGTCCAACTaGTCAGCTATCTTCTTAGAG +
Preference number: 4 (lower is better)
Translates to: HGDVALASGGLARTQRHPTMLSN*SAIFLE
Trigger: CTCTAAGAAGATAGCTGACCAGTTGGACAACATTGT...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGTACGCTGGTGGGTTTGGTCTCCTaGACGTGTTCAAACCACCTT +
Preference number: 4 (lower is better)
Translates to: HCASARPSCSGTRPRCTLVGLVS*TCSNHL
Trigger: AAGGTGGTTTGAACACGTCCAGGAGACCAAACCCAC...CAGCGTACATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp ACAAGACAGTTGTCATCAGCCTCCTTTCCACCCAGGTCAGGGCGGGCTGTAGGGCTGACACAGAATACGTaGCCAGAGTCTGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TRQLSSASFPPRSGRAVGLTQNT*PESGAA
Trigger: AGCAGCCCCAGACTCTGGCCACGTATTCTGTGTCAG...CCCTACAGCCCGCCCTGACCTGGGTGGAAAGGAGGCTGATGACAACTGTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCAGAGCAAAGATGAATaGGTGGACGTACTTCATGTA +
Preference number: 4 (lower is better)
Translates to: HSQPRSRPASSGALARPGQSKDE*VDVLHV
Trigger: TACATGAAGTACGTCCACCCATTCATCTTTGCTCTG...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GAGCCATTTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTGCTTGGAAAATGGCGACACTCGATGCGGCTaGGAACGTCCTTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: EPFPEKVLPHRGLCLENGDTRCG*ERPSGR
Trigger: CCTCCCTGAAGGACGTTCCCAGCCGCATCGAGTGTC...GCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp ACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGTGGCTTCGTCCACCATaGCAGAGGGCTGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: TYLMNSRAGLLSSKWEPGWLRPP*QRAAGG
Trigger: ACCGCCTGCAGCCCTCTGCCATGGTGGACGAAGCCA...CCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGTGCACAGGCAGCACAGGTaGCTTCGTCCACCATGGCAG +
Preference number: 4 (lower is better)
Translates to: PTSTRRSRSRFSLFTWFVHRQHR*LRPPWQ
Trigger: CTGCCATGGTGGACGAAGCCACCTGTGCTGCCTGTG...CACAAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp TGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCAGCCGACTCCAGCTGGTGCTaGATCCGATGGTATTCGCTG +
Preference number: 4 (lower is better)
Translates to: CEAVGPAHFSMQTGETPADSSWC*IRWYSL
Trigger: CAGCGAATACCATCGGATCCAGCACCAGCTGGAGTC...GGCTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CCA 90 bp GAGCCATTTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTGCTTGGAAAATGGCTGCCAGCCATCTCCATaGAGTACCAGCGAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: EPFPEKVLPHRGLCLENGCQPSP*STSEPP
Trigger: AGGGGGCTCGCTGGTACTCCATGGAGATGGCTGGCA...GCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAATCAGCTCCCGTGCCTaGGTGATGATGTTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: MNSRAGLLSSKWEPGRTGISSRA*VMMLAP
Trigger: AGGGGCCAACATCATCACCCAGGCACGGGAGCTGAT...TCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCGATGGCCTCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAGGCTCAGCCAGCTCCTaGTACTGGTCATTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: AMASDSRWQGQTKAGSGPGSASS*YWSLVK
Trigger: CTTCACCAATGACCAGTACCAGGAGCTGGCTGAGCC...TGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGCCATCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GATCATGCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTCAGAGTCAGGCATGTTaGCTGCCTTGCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: DHAPGSMALPVQDPIVDLQSQAC*LPCCTA
Trigger: TGCTGTACAGCAAGGCAGCCAACATGCCTGACTCTG...AAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCATGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCGCATCCTTGACCATCTaGTCTCCCAGGAACTCGGCC +
Preference number: 4 (lower is better)
Translates to: SRAGLLSSKWEPGRTGNIASLTI*SPRNSA
Trigger: GGCCGAGTTCCTGGGAGACCAGATGGTCAAGGATGC...GATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGACAAGCCATTCCTCCTaGCTGGTTCCCAGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQTSHSS*LVPRAG
Trigger: TCCCGCCCTGGGAACCAGCCAGGAGGAATGGCTTGT...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAGCGAGCAGGAATCGCTaGATGGCTCTGCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: MNSRAGLLSSKWEPGRTGASRNR*MALQMV
Trigger: GACCATCTGCAGAGCCATCCAGCGATTCCTGCTCGC...TCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GATCATGCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTAGACAGGAATTTCACTaGCCAGCCTCTTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: DHAPGSMALPVQDPIVDLRQEFH*PASSAP
Trigger: GGGAGCTGAAGAGGCTGGCCAGTGAAATTCCTGTCT...AAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCATGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCACAGATAGGCACCAGTaGGAATTCCTCCAAGACAGG +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLTDRHQ*EFLQDR
Trigger: CCTGTCTTGGAGGAATTCCCACTGGTGCCTATCTGT...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGTGTTGTGGCGCTGGAGGTaGCGGGCAAAGAAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: PTSTRRSRSRFSLFTWFVLWRWR*RAKKRS
Trigger: CGACCTCTTCTTTGCCCGCCACCTCCAGCGCCACAA...CACAAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACTGGGTTCTTTACCTGCTGCAGGGCCGCAGGGATGGTGATGATCTTCTGGATAGGTGGTTGTGGCGCTaGAGGTGGCGGGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: HWVLYLLQGRRDGDDLLDRWLWR*RWRAKK
Trigger: CTTCTTTGCCCGCCACCTCCAGCGCCACAACCACCT...ATCCAGAAGATCATCACCATCCCTGCGGCCCTGCAGCAGGTAAAGAACCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGAGACAGCCAGAGCAGGTaGTTGTGGCGCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRDSQSR*LWRWRW
Trigger: CCACCTCCAGCGCCACAACCACCTGCTCTGGCTGTC...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGTACGCTGGCTCCACACACACTGTaGAGTAACAGCCTGAACTGT +
Preference number: 4 (lower is better)
Translates to: HCASARPSCSGTRPRCTLAPHTL*SNSLNC
Trigger: ACAGTTCAGGCTGTTACTCCACAGTGTGTGTGGAGC...CAGCGTACATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGTCCGCCATAGTTAGATaGATCCATCCAGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: HSQPRSRPASSGALARPGSAIVR*IHPEKK
Trigger: TTTCTTCTCTGGATGGATCCATCTAACTATGGCGGA...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACGCTCCCCCTGCTTTCTaGGAGTCTTGCAGTCCACAG +
Preference number: 4 (lower is better)
Translates to: NSRAGLLSSKWEPGRTGNAPPAF*ESCSPQ
Trigger: CTGTGGACTGCAAGACTCCCAGAAAGCAGGGGGAGC...GTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAGCTCCCCCTGCTTTCTaGGAGTCTTGCAGTCCACAG +
Preference number: 4 (lower is better)
Translates to: MNSRAGLLSSKWEPGRTGAPPAF*ESCSPQ
Trigger: CTGTGGACTGCAAGACTCCCAGAAAGCAGGGGGAGC...TCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCGCTCCCCCTGCTTTCTaGGAGTCTTGCAGTCCACAG +
Preference number: 4 (lower is better)
Translates to: SRAGLLSSKWEPGRTGNIAPPAF*ESCSPQ
Trigger: CTGTGGACTGCAAGACTCCCAGAAAGCAGGGGGAGC...GATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCTGCTGAGTACAGGGCGCCAAGGCTGGGCATCTGGTTGCTGCGCACAGTGTGTAAATCCTCCACGTTaGATTCCTCCGCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ALLSTGRQGWASGCCAQCVNPPR*IPPPLP
Trigger: AGGAAGAGGCGGAGGAATCCAACGTGGAGGATTTAC...ACACTGTGCGCAGCAACCAGATGCCCAGCCTTGGCGCCCTGTACTCAGCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACCAGGGGTCTCGGAACTaGGCCTCCTCGGAGAACTCG +
Preference number: 4 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNQGSRN*ASSENS
Trigger: CGAGTTCTCCGAGGAGGCCCAGTTCCGAGACCCCTG...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CTCGTCGGGCTCCATGGGAATAATGGTGCACAGAGCAAAGATGAATGGGTGGACCAGGGGTCTCGGAACTaGGCCTCCTCGGAGAACTCG +
Preference number: 4 (lower is better)
Translates to: LVGLHGNNGAQSKDEWVDQGSRN*ASSENS
Trigger: CGAGTTCTCCGAGGAGGCCCAGTTCCGAGACCCCTG...GTCCACCCATTCATCTTTGCTCTGTGCACCATTATTCCCATGGAGCCCGACGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp TTTCCTGAGGCTGATAGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCCCAGCGTCATCTCGATaGCAGAGGAGTCGTAGGGCG +
Preference number: 4 (lower is better)
Translates to: FPEADRGFPLDPAPNKQGPASSR*QRSRRA
Trigger: CGCCCTACGACTCCTCTGCCATCGAGATGACGCTGG...GCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCTATCAGCCTCAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CGGTTCTCAGAGATGAGCTCGAATAGCTCAGAGTCAGGCATGTTGGCTGCCTTGACGGGGATGTGGCCTTaGCATCAGGAGGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: RFSEMSSNSSESGMLAALTGMWP*HQEAWH
Trigger: GTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT...CAAGGCAGCCAACATGCCTGACTCTGAGCTATTCGAGCTCATCTCTGAGAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp TTTCCTGAGGCTGATAGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCCAGTGGTCTGGTCACTaGAAGCACGGGGATGTGGCC +
Preference number: 4 (lower is better)
Translates to: FPEADRGFPLDPAPNKQGQWSGH*KHGDVA
Trigger: GGCCACATCCCCGTGCTTCCAGTGACCAGACCACTG...GCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCTATCAGCCTCAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGTGTCCAGGGACAGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTTTCCTCCCCGTTCCCTaGCCTGGGGTCACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: GVQGQHLAHVFDELQGRVFLPVP*PGVTGL
Trigger: CAAACCTGTGACCCCAGGCCAGGGAACGGGGAGGAA...AACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCTGTCCCTGGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GAGCCATTTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTGCTTGGAAAATGGCTTCCTCCCCGTTCCCTaGCCTGGGGTCACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: EPFPEKVLPHRGLCLENGFLPVP*PGVTGL
Trigger: CAAACCTGTGACCCCAGGCCAGGGAACGGGGAGGAA...GCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGCTTCTTCAGGTGCTCTaGCGAGGCCAGGGCCACATC +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQLLQVL*RGQGHI
Trigger: GATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAG...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCTGCTGAGTACAGGGCGCCAAGGCTGGGCATCTGGTTGCTGCGCACAGTGTGAAGCAACAGAGGCCTaGAAAAGCATTCACTGCGTG +
Preference number: 4 (lower is better)
Translates to: ALLSTGRQGWASGCCAQCEATEA*KSIHCV
Trigger: CACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTC...ACACTGTGCGCAGCAACCAGATGCCCAGCCTTGGCGCCCTGTACTCAGCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACACCACCCCACCAGGTGTaGTGCAGGAAGCAACAGAGG +
Preference number: 4 (lower is better)
Translates to: LMNSRAGLLSSKWEPGRTPPHQV*CRKQQR
Trigger: CCTCTGTTGCTTCCTGCACCACACCTGGTGGGGTGG...TGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GATCATGCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGGCTTTTCCTCCCTCTaGGAGGCAGGACAAAGAACT +
Preference number: 4 (lower is better)
Translates to: DHAPGSMALPVQDPIVDLGFSSL*EAGQRT
Trigger: AGTTCTTTGTCCTGCCTCCCAGAGGGAGGAAAAGCC...AAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCATGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCACATTTCATACTTGTTTaGTGCCCTGTGAAATTGGCC +
Preference number: 4 (lower is better)
Translates to: GHSQPRSRPASSGALARPHFILV*CPVKLA
Trigger: GGCCAATTTCACAGGGCACCAAACAAGTATGAAATG...TGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCATTTCATACTTGTTTaGTGCCCTGTGAAATTGGCC +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGHFILV*CPVKLA
Trigger: GGCCAATTTCACAGGGCACCAAACAAGTATGAAATG...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCTGTGAGGCTCTCGTCTaGGGTGTCTGCATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLCEALV*GVCISD
Trigger: ATCAGAAATGCAGACACCCCAGACGAGAGCCTCACA...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCGGTTCAGCTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTAAGACACGAGCCTCCTaGGGAGCCTGTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: SVQLIHLVCDVGVQGQHLKTRAS*GACGAP
Trigger: GGGGGCCCCACAGGCTCCCCAGGAGGCTCGTGTCTT...AAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAACCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCATCGAAAAGTGGCCCTaGTTAGAAAGACTCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGAIEKWP*LERLCV
Trigger: CACACAGAGTCTTTCTAACCAGGGCCACTTTTCGAT...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR CAA 72 bp CAGGCCATCTTCCGCTGGCAGTTTGCTCCAGGCTTATaGAAGTCACAGGCAGCACAGGTGGCTTCGTCCACC +
Preference number: 4 (lower is better)
Translates to: QAIFRWQFAPGL*KSQAAQVASST
Trigger: GGTGGACGAAGCCACCTGTGCTGCCTGTGACTTCAATAAGCCTGGAGCAAACTGCCAGCGGAAGATGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CAA 72 bp CGTGCTGCCCTTGAGGAAGGCCTCAAACACCGAGGATaGGAAGATCTTAATCAGCTGCAGTTCCCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: RAALEEGLKHRG*EDLNQLQFPAA
Trigger: CGCCGCGGGGAACTGCAGCTGATTAAGATCTTCCAATCCTCGGTGTTTGAGGCCTTCCTCAAGGGCAGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp TTTCCTGAGGCTGATAGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCCGTTCCAGGCGCTTaGGTGCCGAAACTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: FPEADRGFPLDPAPNKQGSVPGA*VPKLRK
Trigger: CTTCCTCAGTTTCGGCACTCAAGCGCCTGGAACGGA...GCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCTATCAGCCTCAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp CACGTCCAGCCAGTAGTCAGCCACCTTGGCTACAGAGCCATACACCTCTTCCAGATCTTATCCGTCCACTaGCTCCGTTCCAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: HVQPVVSHLGYRAIHLFQILSVH*LRSRRL
Trigger: CAAGCGCCTGGAACGGAGTCAGTGGACGGATAAGAT...CTGGAAGAGGTGTATGGCTCTGTAGCCAAGGTGGCTGACTACTGGCTGGACGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CACAGTGACAGGGGCTGCTGGGTGAGGCAGCTTTACGAGGCCGAAGTCCTCCATCACCTTTGGATCAGATaGGCCTCATCGGGTTCATTG +
Preference number: 4 (lower is better)
Translates to: HSDRGCWVRQLYEAEVLHHLWIR*ASSGSL
Trigger: CAATGAACCCGATGAGGCTCATCTGATCCAAAGGTG...ATGGAGGACTTCGGCCTCGTAAAGCTGCCTCACCCAGCAGCCCCTGTCACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537064.5
CDS-3UTR TCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGACCCTCTTCACCCACCTaGGGCAGTCCATGTGGATGC +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRPSSPT*GSPCGC
Trigger: GCATCCACATGGACTGCCTCAGGTGGGTGAAGAGGG...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTTGGCGGCCGCCTTaGGATTATGACTGCCCACAG +
Preference number: 4 (lower is better)
Translates to: RFSRVRVWIPGETSPQTAPWRPP*DYDCPQ
Trigger: CTGTGGGCAGTCATAATCTCAAGGCGGCCGCCAAGG...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp CCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCAATGTTCCGGAATAAGTGGCGACAGCATCTaGCACAGAATACGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PGSPGGTTCRSAGQCSGISGDSI*HRIRGQ
Trigger: CTGGCCACGTATTCTGTGTCAGATGCTGTCGCCACT...TATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCTGCACAGAGCAAAGATaGATGGGTGGACGTACTTCA +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLCTEQR*MGGRTS
Trigger: TGAAGTACGTCCACCCATTCATCTTTGCTCTGTGCA...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGATGCGACTGGCTGGCATaGACTCGCCCCTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: LAHVFDELQGRVIEQQVGCDWLA*TRPSTA
Trigger: GGCAGTGGAGGGGCGAGTTCATGCCAGCCAGTCGCA...TCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGCATAGATGTTGTGCCAGTCGGGGTGTTTaGCACGTGGCACTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: ATEASGRSASPGCLHRCCASRGV*HVALGS
Trigger: AGAACCCAGTGCCACGTGTCAAACACCCCGACTGGC...ACAACATCTATGCAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGAGCTTCCTCTTCACAGTaGCAGGGGCTGCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRASSSQ*QGLLGE
Trigger: CTCACCCAGCAGCCCCTGTCACTGTGAAGAGGAAGC...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GAAGCACGTAGGAGCGGCAGGGGTCTCGGAACTGGGCCTCCTCGGAGAACTCGCCATGTCCTCTGGCACTaGATACTCATAGAGATTGTA +
Preference number: 4 (lower is better)
Translates to: EARRSGRGLGTGPPRRTRHVLWH*ILIEIV
Trigger: TACAATCTCTATGAGTATTCAGTGCCAGAGGACATG...GCGAGTTCTCCGAGGAGGCCCAGTTCCGAGACCCCTGCCGCTCCTACGTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACTGGGTTCTTTACCTGCTGCAGGGCCGCAGGGATGGTGATGATCTTCTGGATCTCGATGTCTGGCGCTaGCAGCTCAGCGTTGATCTC +
Preference number: 4 (lower is better)
Translates to: HWVLYLLQGRRDGDDLLDLDVWR*QLSVDL
Trigger: GAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAG...ATCCAGAAGATCATCACCATCCCTGCGGCCCTGCAGCAGGTAAAGAACCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CGGTTCTCAGAGATGAGCTCGAATAGCTCAGAGTCAGGCATGTTGGCTGCCTTGCTCTGCTTCCCAGCCTaGAAGGTGCCTCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: RFSEMSSNSSESGMLAALLCFPA*KVPHQL
Trigger: CAGCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAG...CAAGGCAGCCAACATGCCTGACTCTGAGCTATTCGAGCTCATCTCTGAGAACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGCCAGGACCCCATAGTTaGTCTTGTCAGCCACACAGA +
Preference number: 4 (lower is better)
Translates to: DELQGRVIEQQVGTGEDRPGPHS*SCQPHR
Trigger: TCTGTGTGGCTGACAAGATCAACTATGGGGTCCTGG...CCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGGGCAGGTGTCCAGGTTaGGGTAGTGACGGATCATGC +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQGRCPG*GSDGSC
Trigger: GCATGATCCGTCACTACCTCAACCTGGACACCTGCC...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCTTCCCAATGGGAATGTaGAAGTACCTGCTCATCTCG +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLFPMGM*KYLLIS
Trigger: CGAGATGAGCAGGTACTTTCACATTCCCATTGGGAA...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCACCAGCGTCATCTCGATGGCAGAGGAGTCGTAGGGCGCCTGACAGTTGGAGCATGTCGTTGACATGGTaGGACTGGAGAATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: PPASSRWQRSRRAPDSWSMSLTW*DWRMVL
Trigger: CAACACCATTCTCCAGTCTCACCATGTCAACGACAT...GCTCCAACTGTCAGGCGCCCTACGACTCCTCTGCCATCGAGATGACGCTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GTAGAACACACGGGGGATGCTCAGCCTGATGCAGTGCAAGTCACTGCCAACGAGCCCCCTCCATGTCGTTaGCATGGTGAGACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: VEHTGDAQPDAVQVTANEPPPCR*HGETGE
Trigger: TTCTCCAGTCTCACCATGTCAACGACATGGAGGGGG...CTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAGCATCCCCCGTGTGTTCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTGCTGGATCACGTCGAAGCTGATCCCCATGCTGTCGGCCCCCTCCATGTCGTTAATGGATGCTGCTGGTaGTGTACTCCACGTAAGCGA +
Preference number: 4 (lower is better)
Translates to: LLDHVEADPHAVGPLHVVNGCCW*CTPRKR
Trigger: TCGCTTACGTGGAGTACATCACCAGCAGCATCCATT...AACGACATGGAGGGGGCCGACAGCATGGGGATCAGCTTCGACGTGATCCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCATGGTGAAGAAGCTCTaGGTGAGCTCATTTGCGACA +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRMVKKL*VSSFAT
Trigger: TGTCGCAAATGAGCTCACTCAGAGCTTCTTCACCAT...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGCATAGATGTTGTCCAGGGCAGGGTTATTaGGCAGCAAGTGGGAACCGG +
Preference number: 4 (lower is better)
Translates to: ATEASGRSASPGCLHRCCPGQGY*AASGNR
Trigger: CCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGG...ACAACATCTATGCAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGCCAGGGCAGGGTTATTaGGCAGCAAGTGGGAACCGG +
Preference number: 4 (lower is better)
Translates to: YLMNSRAGLLSSKWEPGRPGQGY*AASGNR
Trigger: CCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGG...CCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTTACAGCTGCGGCAGATaGCCTCAGGAAGCACGTAGG +
Preference number: 4 (lower is better)
Translates to: SPTSTRRSRSRFSLFTWFYSCGR*PQEARR
Trigger: CCTACGTGCTTCCTGAGGTCATCTGCCGCAGCTGTA...AAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCGACCGCCCCATCCTCTaGGAAGGAAGAGTCTTTACA +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLDRPIL*EGRVFT
Trigger: TGTAAAGACTCTTCCTTCTCAGAGGATGGGGCGGTC...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCGATGGCCTCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCATTCCGATCTGTTCCATaGAGACCTGGGTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: AMASDSRWQGQTKAGSGPFRSVP*RPGCGW
Trigger: CCATCCACACCCAGGTCTTCATGGAACAGATCGGAA...TGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGCCATCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCTCCATGCAAACAGGTaGGACTCCAGCCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: RFSRVRVWIPGETSPQTALHANR*DSSPTR
Trigger: CCTGGTGGGGCTGGAGTCTCACCTGTTTGCATGGAG...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCTTGTTTGGTGCCCTGTaGAATTGGCCTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGALFGAL*NWPFFF
Trigger: AAAGAAGAAAGGCCAATTTCACAGGGCACCAAACAA...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGCATAGATGTTGTCAGACCGACGGCTCCTaGCACCTAAGTGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: ATEASGRSASPGCLHRCCQTDGS*HLSADA
Trigger: GGCATCAGCACTTAGGTGTCAGGAGCCGTCGGTCTG...ACAACATCTATGCAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR TCA 90 bp GGAAGCCTATCTCCTGCTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCACTACATGTTCCTTGCTaGGTAACACACAGAAGACTC +
Preference number: 4 (lower is better)
Translates to: GSLSPAACSDRGLLPGPPLHVPC*VTHRRL
Trigger: GAGTCTTCTGTGTGTTACTCAGCAAGGAACATGTAG...TGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAGCAGGAGATAGGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp AGGTGCTCAAGAGCAAAGGTCTCTGCTTCCCAGCCTGAAAGGTGCCTCACCAGCAACACTTGGCCACTCTaGCTTCCTCTCCGTGACAGG +
Preference number: 4 (lower is better)
Translates to: RCSRAKVSASQPERCLTSNTWPL*LPLRDR
Trigger: CCTGTCACGGAGAGGAAGTCAGAGTGGCCAAGTGTT...GCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAGACCTTTGCTCTTGAGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672002.1
CDS-3UTR GCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGTTGGCGTGGAAGGCCTaGACCATCAGCAAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQLAWKA*TISKAS
Trigger: TGAGGCCTTGCTGATGGTGCAGGCCTTCCACGCCAA...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR GCA 90 bp ACTCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTGGCAAGGGATATCGCTaGGGAAAACCCCAGACTCGA +
Preference number: 4 (lower is better)
Translates to: TRRHPPGEAGLGSAYSPGGKGYR*GKPQTR
Trigger: TCGAGTCTGGGGTTTTCCGCAGCGATATCCCTTGCC...ACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp AGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGCACCTCCATGTTCTTaGAGCGCTTCACCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: RAGLLSSKWEPGRTGNISAPPCS*SASPQP
Trigger: CGGCTGAGGTGAAGCGCTGCAAGAACATGGAGGTGC...AGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CACTGGGTTCTTTACCTGCTGCAGGGCCGCAGGGATGGTGATGATCTTCTGGATGCATGTTGGCTGCCTTaGTGTACAGCACGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: HWVLYLLQGRRDGDDLLDACWLP*CTARPA
Trigger: GGCTGGACGTGCTGTACAGCAAGGCAGCCAACATGC...ATCCAGAAGATCATCACCATCCCTGCGGCCCTGCAGCAGGTAAAGAACCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATGTCAGGCATGTTGGCTaGCTTGCTGTACAGCACGTC +
Preference number: 4 (lower is better)
Translates to: LQGRVIEQQVGTGEDRKHVRHVG*LAVQHV
Trigger: GACGTGCTGTACAGCAAGGCAGCCAACATGCCTGAC...ATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGCTCGGCCAGGCGCTTTaGTGTGCTGATGGACGTAGA +
Preference number: 4 (lower is better)
Translates to: AGLLSSKWEPGRTGNISELGQAL*CADGRR
Trigger: TCTACGTCCATCAGCACAGCAAAGCGCCTGGCCGAG...CTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTCTCGGCCAGGCGCTTTaGTGTGCTGATGGACGTAGA +
Preference number: 4 (lower is better)
Translates to: RAGLLSSKWEPGRTGNISLGQAL*CADGRR
Trigger: TCTACGTCCATCAGCACAGCAAAGCGCCTGGCCGAG...AGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGGCGGCAACTCAGCCCTaGATCCTTGACCATCTGGTC +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQAATQP*ILDHLV
Trigger: GACCAGATGGTCAAGGATGCAGGGCTGAGTTGCCGC...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ATATACCATCTGTGTCCAGCTCTAAGGGCCTCCCAATCTGCTCGATCAGCTCCCGGGTTCTTTACCTGCTaGAGGGCCGCAGGGATGGTG +
Preference number: 4 (lower is better)
Translates to: IYHLCPALRASQSARSAPGFFTC*RAAGMV
Trigger: CACCATCCCTGCGGCCCTGCAGCAGGTAAAGAACCC...GGGAGCTGATCGAGCAGATTGGGAGGCCCTTAGAGCTGGACACAGATGGTATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGACTGGGTTCTTTACCTaGTGCAGGGCCGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQTGFFT*CRAAGM
Trigger: CATCCCTGCGGCCCTGCAGCAGGTAAAGAACCCAGT...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGGAAGGTCCAGGATGCTaGGGGCAGTTCTTCGCAAGA +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVEGPGC*GQFFAR
Trigger: TCTTGCGAAGAACTGCCCGCAGCATCCTGGACCTTC...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TCATATACGCCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGTGCAGTGCAAGTCACTaGCAACGAGCGCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: SYTPSMSGADSSALISLMCSASH*QRAPTA
Trigger: GGCTGTGGGCGCTCGTTGGCAGTGACTTGCACTGCA...CATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGGCGTATATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ATATACCATCTGTGTCCAGCTCTAAGGGCCTCCCAATCTGCTCGATCAGCTCCCTGCAGTGCAAGTCACTaGCAACGAGCGCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: IYHLCPALRASQSARSAPCSASH*QRAPTA
Trigger: GGCTGTGGGCGCTCGTTGGCAGTGACTTGCACTGCA...GGGAGCTGATCGAGCAGATTGGGAGGCCCTTAGAGCTGGACACAGATGGTATAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGAGGCTGGGCATCTGGTTaGTGCGCACAGTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRGWASG*CAQCPA
Trigger: TGCTGGACACTGTGCGCAGCAACCAGATGCCCAGCC...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GGGGGAACTTCTCTGACTCCAGCTGGTGCTGGATCCGATGGTATTCGCTGCGACATCGCTGGATGGCTCTaGAGATGGTCTTCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: GGTSLTPAGAGSDGIRCDIAGWL*RWSSGQ
Trigger: CTGACCTGAAGACCATCTGCAGAGCCATCCAGCGAT...GTCGCAGCGAATACCATCGGATCCAGCACCAGCTGGAGTCAGAGAAGTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCTCATCTCGAAGGCCTaGGACAGGCAGGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RFSRVRVWIPGETSPQTALISKA*DRQVSR
Trigger: CCTGGACACCTGCCTGTCGCAGGCCTTCGAGATGAG...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCAACTCAGCGATGAGCTaGAGGAAGAGCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRNSAMS*RKSFFI
Trigger: GATGAAGAAGCTCTTCCTGCAGCTCATCGCTGAGTT...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCCATAGAAGGAGTTCAGGATGCACTTGTGGGCCAGCTGCAGCGAGTCATACAGTCAGCCCGTCCTTCATaGAGTGGTACACGGCCACGA +
Preference number: 4 (lower is better)
Translates to: AIEGVQDALVGQLQRVIQSARPS*SGTRPR
Trigger: TCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGA...CTGTATGACTCGCTGCAGCTGGCCCACAAGTGCATCCTGAACTCCTTCTATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACCAGGAGGTACGACATaGCGTAGTGCTGGGCAATGT +
Preference number: 4 (lower is better)
Translates to: ELQGRVIEQQVGTGEDRKPGGTT*RSAGQC
Trigger: ACATTGCCCAGCACTACGGCATGTCGTACCTCCTGG...TTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ACTCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTCCAGGAGGTACGACATaGCGTAGTGCTGGGCAATGT +
Preference number: 4 (lower is better)
Translates to: TRRHPPGEAGLGSAYSPGPGGTT*RSAGQC
Trigger: ACATTGCCCAGCACTACGGCATGTCGTACCTCCTGG...ACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGCCTCGCTCACGGCCTaGTTCTTCAGGTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: HTYLMNSRAGLLSSKWEPASLTA*FFRCSG
Trigger: GCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGC...CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTTGGAAAAGCATTCACTaGGTGAGAAACGGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: ATEAWKSIHCVRNGAQGTWKSIH*VRNGAQ
Trigger: CTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCA...AGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GATCCCGAAGAGCGCTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGTGGAAAAGCATTCACTaGGTGAGAAACGGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: DPEERFVGLCVVVQVDMAWKSIH*VRNGAQ
Trigger: CTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCA...CGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAGCGCTCTTCGGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGGTGAAGGACAAGGGCTaGAGTGAGCCAAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: DELQGRVIEQQVGTGEDRVKDKG*SEPKVR
Trigger: CCTCACTTTTGGCTCACTGCAGCCCTTGTCCTTCAC...CCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GGTGTCCAGGGACAGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTCCCAGCCCACGACCATaGTCTTCAGGATCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: GVQGQHLAHVFDELQGRVPSPRP*SSGSLP
Trigger: TGGAAGGGATCCTGAAGAGCATGGTCGTGGGCTGGG...AACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCTGTCCCTGGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR GCA 90 bp GCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCGCATACAGGCAAACGTaGACGTTCATAACCATGTCT +
Preference number: 4 (lower is better)
Translates to: APGSMALPVQDPIVDLVSAYRQT*TFITMS
Trigger: AGACATGGTTATGAACGTGCACGTTTGCCTGTATGC...GCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGCACGGCATAACCATGTaGATGCACATACATAAACGC +
Preference number: 4 (lower is better)
Translates to: PGALRLSPSFMQWYTATMHGITM*MHIHKR
Trigger: GCGTTTATGTATGTGCATGCACATGGTTATGCCGTG...CATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CTGCTGGATCACGTCGAAGCTGATCCCCATGCTGTCGGCCCCCTCCATGTCGTTTCGGGGAGTAACACGTaGGTATGTGTAAACACGTGC +
Preference number: 4 (lower is better)
Translates to: LLDHVEADPHAVGPLHVVSGSNT*VCVNTC
Trigger: GCACGTGTTTACACATACGCACGTGTTACTCCCCGA...AACGACATGGAGGGGGCCGACAGCATGGGGATCAGCTTCGACGTGATCCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CTGCTGGATCACGTCGAAGCTGATCCCCATGCTGTCGGCCCCCTCCATGTCGTTGTTGGCTACCACCTCTaGTTCAGGGGAGAAATTTGG +
Preference number: 4 (lower is better)
Translates to: LLDHVEADPHAVGPLHVVVGYHL*FRGEIW
Trigger: CCAAATTTCTCCCCTGAAGCAGAGGTGGTAGCCAAC...AACGACATGGAGGGGGCCGACAGCATGGGGATCAGCTTCGACGTGATCCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS-3UTR CCA 90 bp CTGCAGCAGCCACTCCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCGCTCACAACCCTTTCTaGTCGCAATGTAGAAATACG +
Preference number: 4 (lower is better)
Translates to: LQQPLQGLQEVRHAVVLGAHNPF*SQCRNT
Trigger: CGTATTTCTACATTGCGACCAGAAAGGGTTGTGAGC...GCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGGAGTGGCTGCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACCTGTGTACGCGTCGCTaGCGTGATCCTGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNLCTRR*RDPAPC
Trigger: ACAGGGAGCAGGATCACGCCAGCGACGCGTACACAG...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CTCGTCGGGCTCCATGGGAATAATGGTGCACAGAGCAAAGATGAATGGGTGGACCTGTGTACGCGTCGCTaGCGTGATCCTGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: LVGLHGNNGAQSKDEWVDLCTRR*RDPAPC
Trigger: ACAGGGAGCAGGATCACGCCAGCGACGCGTACACAG...GTCCACCCATTCATCTTTGCTCTGTGCACCATTATTCCCATGGAGCCCGACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp TGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCAGCCCCCTCTGCAGAACACTaGAAAGCAGAGCTGTGTACG +
Preference number: 4 (lower is better)
Translates to: CEAVGPAHFSMQTGETPAPSAEH*KAELCT
Trigger: CGTACACAGCTCTGCTTTCCAGTGTTCTGCAGAGGG...GGCTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320574.10
CDS-3UTR CCA 90 bp CTCCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGACAATGTTGTCCAACTaGTCAGCTATCTTCTTAGAG +
Preference number: 4 (lower is better)
Translates to: LLLTGVLPGALRLSPSFMTMLSN*SAIFLE
Trigger: CTCTAAGAAGATAGCTGACCAGTTGGACAACATTGT...CATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGGGAACTTCTCTGACTCCAGCTGGTGCTGGATCCGATGGTATTCGCTGCGACGGATCTTCAGGTCAATaGAGAGGCGGATGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: GGTSLTPAGAGSDGIRCDGSSGQ*RGGCGR
Trigger: CCTACCACATCCGCCTCTCCATTGACCTGAAGATCC...GTCGCAGCGAATACCATCGGATCCAGCACCAGCTGGAGTCAGAGAAGTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCGAAATCATCATAATCTaGTCTGTCTCAGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGEIIII*SVSASG
Trigger: TCCTGATGCTGAGACAGACCAGATTATGATGATTTC...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp TTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACACCCTGGCTGTCCTTCTaGAAGCCTATCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LMNSRAGLLSSKWEPGRTPWLSF*KPISCC
Trigger: GCAGCAGGAGATAGGCTTCCAGAAGGACAGCCAGGG...TGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCAATGTTCCGGAATACTGACACAGAATACGTaGCCAGAGTCTGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PGSPGGTTCRSAGQCSGILTQNT*PESGAA
Trigger: AGCAGCCCCAGACTCTGGCCACGTATTCTGTGTCAG...TATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCAAGATGATGTTGGCGTaGAAGGCCTGCACCATCAGC +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLKMMLA*KACTIS
Trigger: GCTGATGGTGCAGGCCTTCCACGCCAACATCATCTT...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CCA 90 bp AGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTCAGGTGGTAGATGAGTaGACACTCGATGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RAGLLSSKWEPGRTGNISQVVDE*TLDAAG
Trigger: CCCAGCCGCATCGAGTGTCCACTCATCTACCACCTG...AGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGTGTTCCTGGAAGGAGTTTTCCCGCTaGCAGATGGTGGTGAGACGC +
Preference number: 4 (lower is better)
Translates to: PSMSGADSSALISLMCSWKEFSR*QMVVRR
Trigger: GCGTCTCACCACCATCTGCCAGCGGGAAAACTCCTT...CCAGGAACACATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTGGGCATCTGGTTGCTGCGCACAGTGTCCAGCACAAAGACGGATGCCCTGCGAGGAGATGGTCACTTTaGGCTTCTTCACATTGGTCG +
Preference number: 4 (lower is better)
Translates to: AGHLVAAHSVQHKDGCPARRWSL*ASSHWS
Trigger: CGACCAATGTGAAGAAGCCCAAAGTGACCATCTCCT...CGCAGGGCATCCGTCTTTGTGCTGGACACTGTGCGCAGCAACCAGATGCCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCAATGTTCCGGAATAGCCAGCTCCTGGTACTaGTCATTGGTGAAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PGSPGGTTCRSAGQCSGIASSWY*SLVKPS
Trigger: GGAAGGCTTCACCAATGACCAGTACCAGGAGCTGGC...TATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGTTCTTCCTTGGAGGCTaGAAGAATCATGGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQFFLGG*KNHGKV
Trigger: TACCTTGCCATGATTCTTCCAGCCTCCAAGGAAGAA...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGGCATCCTTGACCATCTaGTCTCCCAGGAACTCGGCC +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQASLTI*SPRNSA
Trigger: GGCCGAGTTCCTGGGAGACCAGATGGTCAAGGATGC...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCGATGGCCTCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCATTGGAAAATGGCAAGTaGGATGGCCCTCTCCGTGAC +
Preference number: 4 (lower is better)
Translates to: AMASDSRWQGQTKAGSGPLENGK*DGPLRD
Trigger: GTCACGGAGAGGGCCATCCCACTTGCCATTTTCCAA...TGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGCCATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320574.10
CDS-3UTR CCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCGGGGTGTTTGACACGTaGCACTGGGTTCTTTACCTG +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLGVFDT*HWVLYL
Trigger: CAGGTAAAGAACCCAGTGCCACGTGTCAAACACCCC...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ATATACCATCTGTGTCCAGCTCTAAGGGCCTCCCAATCTGCTCGATCAGCTCCCCCGAAGAGCGCTTTGTaGGCCTGTGCGTGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: IYHLCPALRASQSARSAPPKSAL*ACAWWY
Trigger: GTACCACCACGCACAGGCCCACAAAGCGCTCTTCGG...GGGAGCTGATCGAGCAGATTGGGAGGCCCTTAGAGCTGGACACAGATGGTATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCAAGGCTGGGCATCTaGTTGCTGCGCACAGTGTCC +
Preference number: 4 (lower is better)
Translates to: RFSRVRVWIPGETSPQTAPRLGI*LLRTVS
Trigger: GGACACTGTGCGCAGCAACCAGATGCCCAGCCTTGG...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACAGGTGGTTGTGGCGCTaGAGGTGGCGGGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNRWLWR*RWRAKK
Trigger: CTTCTTTGCCCGCCACCTCCAGCGCCACAACCACCT...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCACAAATGGCCAGTCAAAGCTCCACACACACTGTaGAGTAACAGCCTGAACTGT +
Preference number: 4 (lower is better)
Translates to: LHAQTVDCCPGLHKWPVKAPHTL*SNSLNC
Trigger: ACAGTTCAGGCTGTTACTCCACAGTGTGTGTGGAGC...TTTGACTGGCCATTTGTGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp AGGTGCTCAAGAGCAAAGGTCTCTGCTTCCCAGCCTGAAAGGTGCCTCACCAGCATGAAGCAGAGAGGATaGCGACCGAAGCCAGCGGTA +
Preference number: 4 (lower is better)
Translates to: RCSRAKVSASQPERCLTSMKQRG*RPKPAV
Trigger: TACCGCTGGCTTCGGTCGCCATCCTCTCTGCTTCAT...GCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAGACCTTTGCTCTTGAGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCAATGTTCCGGAATAACTCCACGTAAGCGATaGCATCTTCCACACGGCGCT +
Preference number: 4 (lower is better)
Translates to: PGSPGGTTCRSAGQCSGITPRKR*HLPHGA
Trigger: AGCGCCGTGTGGAAGATGCCATCGCTTACGTGGAGT...TATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AGGTGCTCAAGAGCAAAGGTCTCTGCTTCCCAGCCTGAAAGGTGCCTCACCAGCACTCCACGTAAGCGATaGCATCTTCCACACGGCGCT +
Preference number: 4 (lower is better)
Translates to: RCSRAKVSASQPERCLTSTPRKR*HLPHGA
Trigger: AGCGCCGTGTGGAAGATGCCATCGCTTACGTGGAGT...GCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAGACCTTTGCTCTTGAGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCGAAATTGTCAGAGAATaGAAGGTCTCCTTTGAATGG +
Preference number: 4 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGEIVRE*KVSFEW
Trigger: CCATTCAAAGGAGACCTTCCATTCTCTGACAATTTC...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGCTCCCCCTGCTTTCTaGGAGTCTTGCAGTCCACAG +
Preference number: 4 (lower is better)
Translates to: LMNSRAGLLSSKWEPGRTAPPAF*ESCSPQ
Trigger: CTGTGGACTGCAAGACTCCCAGAAAGCAGGGGGAGC...TGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGGCTCCCCCTGCTTTCTaGGAGTCTTGCAGTCCACAG +
Preference number: 4 (lower is better)
Translates to: AGLLSSKWEPGRTGNISEAPPAF*ESCSPQ
Trigger: CTGTGGACTGCAAGACTCCCAGAAAGCAGGGGGAGC...CTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCCCGTCCTTCATGCAGTaGTACACGGCCACGATGTAC +
Preference number: 4 (lower is better)
Translates to: QGRVIEQQVGTGEDRKHLPSFMQ*YTATMY
Trigger: GTACATCGTGGCCGTGTACCACTGCATGAAGGACGG...GAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TGCAGGGTGAAGGCCATCAGCTTCTTCTGTAGAACTTCCACCAGCGTCATCTCGAGGGCGCCTGACAGTTaGAGCAGAGCCACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: CRVKAISFFCRTSTSVISRAPDS*SRATEA
Trigger: TGCCTCAGTGGCTCTGCTCCAACTGTCAGGCGCCCT...CGAGATGACGCTGGTGGAAGTTCTACAGAAGAAGCTGATGGCCTTCACCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGAGGGCGCCTGACAGTTaGAGCAGAGCCACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: YLMNSRAGLLSSKWEPGRRAPDS*SRATEA
Trigger: TGCCTCAGTGGCTCTGCTCCAACTGTCAGGCGCCCT...CCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGTGTTCCATGAAGACCTaGGTGTGGATGGTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVCSMKT*VWMVRA
Trigger: CGCCCTCACCATCCACACCCAGGTCTTCATGGAACA...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCGATACGAAGCACCCTCCTCCGCTTTAGCGACTCGCTGGTTCACGTAGAACACCTAATGGCCCAGCTGTaGGTTCTTCTGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: AIRSTLLRFSDSLVHVEHLMAQL*VLLQQP
Trigger: TGGCTGCTGCAGAAGAACCCACAGCTGGGCCATTAG...GTGTTCTACGTGAACCAGCGAGTCGCTAAAGCGGAGGAGGGTGCTTCGTATCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGTGGCATCAGGAGGCCTaGCACGGACGCAGAGGCACC +
Preference number: 4 (lower is better)
Translates to: TLHTYLMNSRAGLLSSKWWHQEA*HGRRGT
Trigger: GGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCA...CCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CTCGTCGGGCTCCATGGGAATAATGGTGCACAGAGCAAAGATGAATGGGTGGACCAGTGGTCTGGTCACTaGAAGCACGGGGATGTGGCC +
Preference number: 4 (lower is better)
Translates to: LVGLHGNNGAQSKDEWVDQWSGH*KHGDVA
Trigger: GGCCACATCCCCGTGCTTCCAGTGACCAGACCACTG...GTCCACCCATTCATCTTTGCTCTGTGCACCATTATTCCCATGGAGCCCGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCAGTCAGGGTGGTCAGTaGTCTGGTCACTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: VQEATEAWKSIHCVRNGASQGGQ*SGHWKH
Trigger: GTGCTTCCAGTGACCAGACCACTGACCACCCTGACT...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCATATACGCCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGCCACCCCACCAGGTGTaGTGCAGGAAGCAACAGAGG +
Preference number: 4 (lower is better)
Translates to: SYTPSMSGADSSALISLMPPHQV*CRKQQR
Trigger: CCTCTGTTGCTTCCTGCACCACACCTGGTGGGGTGG...CATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGGCGTATATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCTCCACGTTGGATTCCTCCGCCTCTTCCTCCTCCTCCCCATCTCTTTCCTCCTGGCTTTTCCTCCCTCTaGGAGGCAGGACAAAGAACT +
Preference number: 4 (lower is better)
Translates to: PPRWIPPPLPPPPHLFPPGFSSL*EAGQRT
Trigger: AGTTCTTTGTCCTGCCTCCCAGAGGGAGGAAAAGCC...AGGAGGAAAGAGATGGGGAGGAGGAGGAAGAGGCGGAGGAATCCAACGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCTTTCTGCTTCCAGCTaGTCCTGTGTGGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: ATEAWKSIHCVRNGAQGTLSASS*SCVEVK
Trigger: CTTCACCTCCACACAGGACCAGCTGGAAGCAGAAAG...AGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ATGCGAAGTGCTCGGCCCACCTCCTGGTACACAGCAAGCATTGCCCAGCATGAACCTTCCCAGAGAGGGTaGCACCTGAAGGTGTTAGAG +
Preference number: 4 (lower is better)
Translates to: MRSARPTSWYTASIAQHEPSQRG*HLKVLE
Trigger: CTCTAACACCTTCAGGTGCCACCCTCTCTGGGAAGG...TTCATGCTGGGCAATGCTTGCTGTGTACCAGGAGGTGGGCCGAGCACTTCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR TCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGATCTTATCCGTCCACTaGCTCCGTTCCAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQILSVH*LRSRRL
Trigger: CAAGCGCCTGGAACGGAGTCAGTGGACGGATAAGAT...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp GCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGATCTTATCCGTCCACTaGCTCCGTTCCAGGCGCTTG +
Preference number: 4 (lower is better)
Translates to: AGLLSSKWEPGRTGNISEILSVH*LRSRRL
Trigger: CAAGCGCCTGGAACGGAGTCAGTGGACGGATAAGAT...CTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCCATTTCCTCGGTATCTaGCATTGTACCAATGAGCCA +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRHFLGI*HCTNEP
Trigger: TGGCTCATTGGTACAATGTCAGATACCGAGGAAATG...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp AGGTGCTCAAGAGCAAAGGTCTCTGCTTCCCAGCCTGAAAGGTGCCTCACCAGCGGTCATCTCGGCGGGTaGTTTCTACCGGAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: RCSRAKVSASQPERCLTSGHLGG*FLPEKH
Trigger: ATGCTTTTCCGGTAGAAATCACCCGCCGAGATGACC...GCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAGACCTTTGCTCTTGAGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCACCTTTGGATCAGATaGGCCTCATCGGGTTCATTG +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLHLWIR*ASSGSL
Trigger: CAATGAACCCGATGAGGCTCATCTGATCCAAAGGTG...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320574.10
CDS-3UTR TCA 90 bp ACAGATAGGCACCAGTGGGAATTCCTCCAAGACAGGAATTTCACTGGCCAGCCTGGCGGTTGGTCAGGATaGTGTTGGGGTACATGGCCC +
Preference number: 4 (lower is better)
Translates to: TDRHQWEFLQDRNFTGQPGGWSG*CWGTWP
Trigger: GGGCCATGTACCCCAACATCATCCTGACCAACCGCC...AGGCTGGCCAGTGAAATTCCTGTCTTGGAGGAATTCCCACTGGTGCCTATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCCACACAGATAGGCACTTGCTCCAGGCTTATTaGAGTCACAGGCAGCACAGG +
Preference number: 4 (lower is better)
Translates to: ALPVQDPIVDLVSHTDRHLLQAY*SHRQHR
Trigger: CCTGTGCTGCCTGTGACTTCAATAAGCCTGGAGCAA...GTGCCTATCTGTGTGGCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCGCTCTTCCACCTTGGTaGTGTGGATCTTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLALPPW*CGSSCR
Trigger: CCTACAAGAAGATCCACATCACCAAGGTGGAAGAGC...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp GAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAAAAAGATGCTGTTCTCTaGGCGGGTGACGTAGGTGAG +
Preference number: 4 (lower is better)
Translates to: ELQGRVIEQQVGTGEDRKKDAVL*AGDVGE
Trigger: CTCACCTACGTCACCCGCTCAGAGAACAGCATCTTT...TTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACAGTGACAGGGGCTGCTGGGTGAGGCAGCTTTACGAGGCCGAAGTCCTCCATAACGGTTCTCAGAGATaGGCTCGAATAGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: HSDRGCWVRQLYEAEVLHNGSQR*ARIAQS
Trigger: ACTCTGAGCTATTCGAGCTCATCTCTGAGAACCGTT...ATGGAGGACTTCGGCCTCGTAAAGCTGCCTCACCCAGCAGCCCCTGTCACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTTCAGCCCTGCATCCTTaGCCATCTGGTCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RFSRVRVWIPGETSPQTASALHP*PSGLPG
Trigger: TCCTGGGAGACCAGATGGTCAAGGATGCAGGGCTGA...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGACTCGATGTCTGGCGCTaGCAGCTCAGCGTTGATCTC +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRLDVWR*QLSVDL
Trigger: GAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAG...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTGATGGACGTAGACTTCTGCTCCCCGTAATCTTCCAGCTTCCGAGACATGGAGGCAGGTGTCCAGGTTaGGGTAGTGACGGATCATGC +
Preference number: 4 (lower is better)
Translates to: ADGRRLLLPVIFQLPRHGGRCPG*GSDGSC
Trigger: GCATGATCCGTCACTACCTCAACCTGGACACCTGCC...TCCATGTCTCGGAAGCTGGAAGATTACGGGGAGCAGAAGTCTACGTCCATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CACAGTGACAGGGGCTGCTGGGTGAGGCAGCTTTACGAGGCCGAAGTCCTCCATAACAGCCTGAACTGTTaGTCTCAACAGTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: HSDRGCWVRQLYEAEVLHNSLNC*SQQWLG
Trigger: ACCAAGCCACTGTTGAGATCAACAGTTCAGGCTGTT...ATGGAGGACTTCGGCCTCGTAAAGCTGCCTCACCCAGCAGCCCCTGTCACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCTTGACGGCCAGGTTCTaGAGGTCCAGCTCCACACAC +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKILTARF*RSSSTH
Trigger: GTGTGTGGAGCTGGACCTTCAGAACCTGGCCGTCAA...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCCCAGGGCAGGGTTATTaGGCAGCAAGTGGGAACCGG +
Preference number: 4 (lower is better)
Translates to: AHVFDELQGRVIEQQVGTPGQGY*AASGNR
Trigger: CCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGG...GGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGATACAGCTGCGGCAGATaGCCTCAGGAAGCACGTAGG +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRYSCGR*PQEARR
Trigger: CCTACGTGCTTCCTGAGGTCATCTGCCGCAGCTGTA...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCAGGTCCTGCAGGGTaGAGGCCATCAGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RFSRVRVWIPGETSPQTAPGPAG*RPSASS
Trigger: AGAAGAAGCTGATGGCCTTCACCCTGCAGGACCTGG...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TCATATACGCCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGAAAGCATTCACTGCGTaGGAAACGGCGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SYTPSMSGADSSALISLMKAFTA*ETAPRA
Trigger: TGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTT...CATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGGCGTATATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCATTGTTTGGTGCCCTGTaGAATTGGCCTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: PTRALGTRLVSEPNLREPLFGAL*NWPFFF
Trigger: AAAGAAGAAAGGCCAATTTCACAGGGCACCAAACAA...TGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TGTCTCATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCCTACATGTTCCTTGCTaGGTAACACACAGAAGACTC +
Preference number: 4 (lower is better)
Translates to: CLIVAGRGTGSLTTRDHVLHVPC*VTHRRL
Trigger: GAGTCTTCTGTGTGTTACTCAGCAAGGAACATGTAG...GACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGATGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAAGTAATCCACTGCACTaGCTAAGCGCTTATCTTCAT +
Preference number: 4 (lower is better)
Translates to: PTRALGTRLVSEPNLREPSNPLH*LSAYLH
Trigger: ATGAAGATAAGCGCTTAGGCAGTGCAGTGGATTACT...TGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR GCA 90 bp ACAGTAACGGAACCTGAGTCTCATATACGCCCTCGATGTCTGGCGCTGACAGCTGGCAGTCCATGTGGATaGACTGGGGCGCCTTGTACT +
Preference number: 4 (lower is better)
Translates to: TVTEPESHIRPRCLALTAGSPCG*TGAPCT
Trigger: AGTACAAGGCGCCCCAGTGCATCCACATGGACTGCC...AGCTGTCAGCGCCAGACATCGAGGGCGTATATGAGACTCAGGTTCCGTTACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGGGCAAGGGATATCGCTaGGGAAAACCCCAGACTCGA +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQGKGYR*GKPQTR
Trigger: TCGAGTCTGGGGTTTTCCGCAGCGATATCCCTTGCC...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR GCA 90 bp AGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGAACTCGCCCCTCCACTaGCAGGCCATCTTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: STLHTYLMNSRAGLLSSKNSPLH*QAIFRW
Trigger: CCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGTT...CTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGACACTTGTGGGCCAGCTaGAGCGAGTCATACAGCACC +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRHLWAS*SESYST
Trigger: GGTGCTGTATGACTCGCTGCAGCTGGCCCACAAGTG...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCAAGATCTTAATCAGCTaGAGTTCCCCGCGGCGTTTG +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLKILIS*SSPRRL
Trigger: CAAACGCCGCGGGGAACTGCAGCTGATTAAGATCTT...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGCATGTTGGCTGCCTTaGTGTACAGCACGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNACWLP*CTARPA
Trigger: GGCTGGACGTGCTGTACAGCAAGGCAGCCAACATGC...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCTCGGCCAGGCGCTTTaGTGTGCTGATGGACGTAGA +
Preference number: 4 (lower is better)
Translates to: RFSRVRVWIPGETSPQTALGQAL*CADGRR
Trigger: TCTACGTCCATCAGCACAGCAAAGCGCCTGGCCGAG...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACCCTCACCGTGGGCTCTaGTTGGAAAATGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: FDELQGRVIEQQVGTGEDPHRGL*LENGKW
Trigger: CCACTTGCCATTTTCCAAGCAGAGCCCACGGTGAGG...GTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CAGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAAGGCGCTGCCGGGCCTaGAGCTGCCACTTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: QHLAHVFDELQGRVIEQQRRCRA*SCHFFL
Trigger: CAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCCT...TTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGGATACTCCCTGGTTGAAGGTCCAGGATGCTaGGGGCAGTTCTTCGCAAGA +
Preference number: 4 (lower is better)
Translates to: LCGPVRGGTGRYGGYSLVEGPGC*GQFFAR
Trigger: TCTTGCGAAGAACTGCCCGCAGCATCCTGGACCTTC...AACCAGGGAGTATCCGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACACGGAAGGTCCAGGATaGTGCGGGCAGTTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNTEGPG*CGQFFA
Trigger: TGCGAAGAACTGCCCGCAGCATCCTGGACCTTCCGT...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ACAGTAACGGAACCTGAGTCTCATATACGCCCTCGATGTCTGGCGCTGACAGCTACGGAAGGTCCAGGATaGTGCGGGCAGTTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: TVTEPESHIRPRCLALTATEGPG*CGQFFA
Trigger: TGCGAAGAACTGCCCGCAGCATCCTGGACCTTCCGT...AGCTGTCAGCGCCAGACATCGAGGGCGTATATGAGACTCAGGTTCCGTTACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACTGATCTGCACAATCTaGCACGGAAGGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: ELQGRVIEQQVGTGEDRKLICTI*HGRSRM
Trigger: CATCCTGGACCTTCCGTGGCAGATTGTGCAGATCAG...TTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GTAGAACACACGGGGGATGCTCAGCCTGATGCAGTGCAAGTCACTGCCAACGAGGGACCCGATTTACCTTaGGATACGAAGCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: VEHTGDAQPDAVQVTANEGPDLP*DTKHPP
Trigger: AGGAGGGTGCTTCGTATCGCAAGGTAAATCGGGTCC...CTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAGCATCCCCCGTGTGTTCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACATGGGCATCTGGTTGCTaGGCACAGTGTCCAGCACAA +
Preference number: 4 (lower is better)
Translates to: LMNSRAGLLSSKWEPGRTWASGC*AQCPAQ
Trigger: TTGTGCTGGACACTGTGCGCAGCAACCAGATGCCCA...TGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGATCCTCTGCTCCCCCTaGTTTCTGGGAGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: AGLLSSKWEPGRTGNISEILCSP*FLGVLQ
Trigger: CTGCAAGACTCCCAGAAAGCAGGGGGAGCAGAGGAT...CTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGATCGTCCTCATTTTCCTaGTCATCCTCTGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: MNSRAGLLSSKWEPGRTGSSSFS*SSSAPP
Trigger: AGGGGGAGCAGAGGATGAGCAGGAAAATGAGGACGA...TCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GAAGCACGTAGGAGCGGCAGGGGTCTCGGAACTGGGCCTCCTCGGAGAACTCGCGCCTGTGGCAAAAACTaGAAAATGTTCCAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: EARRSGRGLGTGPPRRTRACGKN*KMFQLF
Trigger: AAACAACTGGAACATTTTGCAGTTTTTGCCACAGGC...GCGAGTTCTCCGAGGAGGCCCAGTTCCGAGACCCCTGCCGCTCCTACGTGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGGTTCTGGCAGGAGGCTaGCTGTGGCAAAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVVLAGG*LWQKLQ
Trigger: TTGCAGTTTTTGCCACAGGCAGCCTCCTGCCAGAAC...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCTCAGCCCGTCCTTCATaGAGTGGTACACGGCCACGA +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKISARPS*SGTRPR
Trigger: TCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGA...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CAGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAATGCTCCCTGGAGCACTaGGCCTCAGCCCGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QHLAHVFDELQGRVIEQQCSLEH*ASARPS
Trigger: TGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCA...TTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGCTCCCTGGAGCACTaGGCCTCAGCCCGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: STLHTYLMNSRAGLLSSKCSLEH*ASARPS
Trigger: TGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCA...CTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GGTGATGTACTCCACGTAAGCGATGGCATCTTCCACACGGCGCTTCTTTGTACAAGGCAGACCAGGTCCTaGAGGGTGAAGGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: GDVLHVSDGIFHTALLCTRQTRS*RVKAIS
Trigger: GCTGATGGCCTTCACCCTGCAGGACCTGGTCTGCCT...TGTACAAAGAAGCGCCGTGTGGAAGATGCCATCGCTTACGTGGAGTACATCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGCATAGATGTTGTTGCAGTACACAGGCATaGTGGTCTCCTTCACCCCGC +
Preference number: 4 (lower is better)
Translates to: ATEASGRSASPGCLHRCCCSTQA*WSPSPR
Trigger: GCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCA...ACAACATCTATGCAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TGCAGGGTGAAGGCCATCAGCTTCTTCTGTAGAACTTCCACCAGCGTCATCTCGAGCTGTGGGTTCTTCTaGAGCAGCCACTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: CRVKAISFFCRTSTSVISSCGFF*SSHSRV
Trigger: GACCCTGGAGTGGCTGCTGCAGAAGAACCCACAGCT...CGAGATGACGCTGGTGGAAGTTCTACAGAAGAAGCTGATGGCCTTCACCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCTTCATACTTGTTTGGTaGCCTGTGAAATTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGAFILVW*PVKLAF
Trigger: AAAGGCCAATTTCACAGGGCACCAAACAAGTATGAA...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GATCCCGAAGAGCGCTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGTCGGGGAGTAACACGTaGGTATGTGTAAACACGTGC +
Preference number: 4 (lower is better)
Translates to: DPEERFVGLCVVVQVDMASGSNT*VCVNTC
Trigger: GCACGTGTTTACACATACGCACGTGTTACTCCCCGA...CGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAGCGCTCTTCGGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGACCGAAACTGAGGAAGTaGCGCCATCATCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRPKLRK*RHHPCW
Trigger: CCAGCAGGGATGATGGCGCCACTTCCTCAGTTTCGG...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CCA 90 bp CCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCAATGTTCCGGAATACCCTCTGCAGAACACTaGAAAGCAGAGCTGTGTACG +
Preference number: 4 (lower is better)
Translates to: PGSPGGTTCRSAGQCSGIPSAEH*KAELCT
Trigger: CGTACACAGCTCTGCTTTCCAGTGTTCTGCAGAGGG...TATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537064.5
CDS-3UTR CCA 90 bp CACGGTGTCCACGTAGAAGGAGTTTTCCCGCTGGCAGATGGTGGTGAGACGCTCGGGGCCTTCATATTCTaGCTTGGGGGTGAACTCAAA +
Preference number: 4 (lower is better)
Translates to: HGVHVEGVFPLADGGETLGAFIF*LGGELK
Trigger: TTTGAGTTCACCCCCAAGCCAGAATATGAAGGCCCC...GAGCGTCTCACCACCATCTGCCAGCGGGAAAACTCCTTCTACGTGGACACCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCGTGGGTTTGGTCTCCTaGACGTGTTCAAACCACCTT +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLVGLVS*TCSNHL
Trigger: AAGGTGGTTTGAACACGTCCAGGAGACCAAACCCAC...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCGCAAAGATGAATGGGTaGACGTACTTCATGTACAGG +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRAKMNG*TYFMYR
Trigger: CCTGTACATGAAGTACGTCCACCCATTCATCTTTGC...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGTCTTCCTCAAGGGCGTaGCGCAAGGTCTTCTCAACC +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQSSSRA*RKVFST
Trigger: GGTTGAGAAGACCTTGCGCCACGCCCTTGAGGAAGA...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CCA 90 bp CGCACCATATACCATCTGTGTCCAGCTCTAAGGGCCTCCCAATCTGCTCGATCACAGGTGGTAGATGAGTaGACACTCGATGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RTIYHLCPALRASQSARSQVVDE*TLDAAG
Trigger: CCCAGCCGCATCGAGTGTCCACTCATCTACCACCTG...TGATCGAGCAGATTGGGAGGCCCTTAGAGCTGGACACAGATGGTATATGGTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp ATGGCATCTTCCACACGGCGCTTCTTTGTACAGAGGATGATGCGGTTGAAGTTGTGGCTTCGTCCACCATaGCAGAGGGCTGCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: MASSTRRFFVQRMMRLKLWLRPP*QRAAGG
Trigger: ACCGCCTGCAGCCCTCTGCCATGGTGGACGAAGCCA...CAACTTCAACCGCATCATCCTCTGTACAAAGAAGCGCCGTGTGGAAGATGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGAGCCAGGCCATCTTCCGCTaGCAGTTTGCTCCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: GLLSSKWEPGRTGNISESQAIFR*QFAPGL
Trigger: TAAGCCTGGAGCAAACTGCCAGCGGAAGATGGCCTG...GCTCTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp TCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTCAGGCCATCTTCCGCTaGCAGTTTGCTCCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: SPTSTRRSRSRFSLFTWFQAIFR*QFAPGL
Trigger: TAAGCCTGGAGCAAACTGCCAGCGGAAGATGGCCTG...AAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp AGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTTGGTGCTGGATCCGATaGTATTCGCTGCGACTGGCT +
Preference number: 4 (lower is better)
Translates to: RAGLLSSKWEPGRTGNISWCWIR*YSLRLA
Trigger: AGCCAGTCGCAGCGAATACCATCGGATCCAGCACCA...AGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCGATGGCCTCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCATTCTCTGACTCCAGCTaGTGCTGGATCCGATGGTAT +
Preference number: 4 (lower is better)
Translates to: AMASDSRWQGQTKAGSGPFSDSS*CWIRWY
Trigger: ATACCATCGGATCCAGCACCAGCTGGAGTCAGAGAA...TGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGCCATCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CCA 90 bp TTTCCTGAGGCTGATAGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTTCAGGATGCACTTGTaGGCCAGCTGCAGCGAGTCA +
Preference number: 4 (lower is better)
Translates to: FPEADRGFPLDPAPNKQGFRMHL*ASCSES
Trigger: TGACTCGCTGCAGCTGGCCCACAAGTGCATCCTGAA...GCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCTATCAGCCTCAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGAGCTTCAGGATGCACTTGTaGGCCAGCTGCAGCGAGTCA +
Preference number: 4 (lower is better)
Translates to: GLLSSKWEPGRTGNISESFRMHL*ASCSES
Trigger: TGACTCGCTGCAGCTGGCCCACAAGTGCATCCTGAA...GCTCTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGTGCCAGCCATCTCCATaGAGTACCAGCGAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: HTYLMNSRAGLLSSKWEPCQPSP*STSEPP
Trigger: AGGGGGCTCGCTGGTACTCCATGGAGATGGCTGGCA...CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GATCCCGAAGAGCGCTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGGTTCAACATGGCGCCTaGGTAGGAGATGGTCACTTT +
Preference number: 4 (lower is better)
Translates to: DPEERFVGLCVVVQVDMAVQHGA*VGDGHF
Trigger: AAAGTGACCATCTCCTACCCAGGCGCCATGTTGAAC...CGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAGCGCTCTTCGGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGAGCGGCTCAGCCAGCTCCTaGTACTGGTCATTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GLLSSKWEPGRTGNISESGSASS*YWSLVK
Trigger: CTTCACCAATGACCAGTACCAGGAGCTGGCTGAGCC...GCTCTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACAATCAAACACCGAGGATTaGAAGATCTTAATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GAAGPAAATSSCGTGARQSNTED*KILISC
Trigger: GCAGCTGATTAAGATCTTCCAATCCTCGGTGTTTGA...TTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCAATGTTCCGGAATACAGAGTCAGGCATGTTaGCTGCCTTGCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: PGSPGGTTCRSAGQCSGIQSQAC*LPCCTA
Trigger: TGCTGTACAGCAAGGCAGCCAACATGCCTGACTCTG...TATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGAGCATCCTTGACCATCTaGTCTCCCAGGAACTCGGCC +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRASLTI*SPRNSA
Trigger: GGCCGAGTTCCTGGGAGACCAGATGGTCAAGGATGC...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCACACGTACTGAACAGGCCGGCCTaGCTGGTCTCGCTGATCTGC +
Preference number: 4 (lower is better)
Translates to: LIHLVCDVGVQGQHLAHVLNRPA*LVSLIC
Trigger: GCAGATCAGCGAGACCAGCCAGGCCGGCCTGTTCAG...TACGTGTGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCGATGGCCTCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAGGATGGCTCTGCAGATaGTCTTCAGGTCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: AMASDSRWQGQTKAGSGPGWLCR*SSGQFL
Trigger: CAGAAACTGACCTGAAGACCATCTGCAGAGCCATCC...TGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGCCATCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCGCGAGCAGGAATCGCTaGATGGCTCTGCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKIASRNR*MALQMV
Trigger: GACCATCTGCAGAGCCATCCAGCGATTCCTGCTCGC...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TGCAGGGTGAAGGCCATCAGCTTCTTCTGTAGAACTTCCACCAGCGTCATCTCGGCGAGCAGGAATCGCTaGATGGCTCTGCAGATGGTC +
Preference number: 4 (lower is better)
Translates to: CRVKAISFFCRTSTSVISASRNR*MALQMV
Trigger: GACCATCTGCAGAGCCATCCAGCGATTCCTGCTCGC...CGAGATGACGCTGGTGGAAGTTCTACAGAAGAAGCTGATGGCCTTCACCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGACAGATAGGCACCAGTaGGAATTCCTCCAAGACAGG +
Preference number: 4 (lower is better)
Translates to: DELQGRVIEQQVGTGEDRTDRHQ*EFLQDR
Trigger: CCTGTCTTGGAGGAATTCCCACTGGTGCCTATCTGT...CCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGACAGCCAGAGCAGGTaGTTGTGGCGCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HLAHVFDELQGRVIEQQVDSQSR*LWRWRW
Trigger: CCACCTCCAGCGCCACAACCACCTGCTCTGGCTGTC...CACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTATGAAGCAGAGAGGATaGCGACCGAAGCCAGCGGTA +
Preference number: 4 (lower is better)
Translates to: SPTSTRRSRSRFSLFTWFMKQRG*RPKPAV
Trigger: TACCGCTGGCTTCGGTCGCCATCCTCTCTGCTTCAT...AAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGAGCTCCCCCTGCTTTCTaGGAGTCTTGCAGTCCACAG +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRAPPAF*ESCSPQ
Trigger: CTGTGGACTGCAAGACTCCCAGAAAGCAGGGGGAGC...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCTTATTGAGCAGCAAGTaGGAACCGGGGAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: VQEATEAWKSIHCVRNGALLSSK*EPGRTG
Trigger: TCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAA...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCGCAGCTGCAGTACACAGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGTTCAGCTTATTCACCTaGTTTGTGATGTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: AQLQYTGMLVSFTPRHFRFSLFT*FVMLVS
Trigger: GGACACCAACATCACAAACCAGGTGAATAAGCTGAA...CCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GAGCCATTTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTGCTTGGAAAATGGCCTAATGGCCCAGCTGTaGGTTCTTCTGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: EPFPEKVLPHRGLCLENGLMAQL*VLLQQP
Trigger: TGGCTGCTGCAGAAGAACCCACAGCTGGGCCATTAG...GCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGTGTCCAGGGACAGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTAGTCAGGGTGGTCAGTaGTCTGGTCACTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: GVQGQHLAHVFDELQGRVSQGGQ*SGHWKH
Trigger: GTGCTTCCAGTGACCAGACCACTGACCACCCTGACT...AACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCTGTCCCTGGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGTTTGGACAGTCAGGGTaGTCAGTGGTCTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVFGQSG*SVVWSL
Trigger: CAGTGACCAGACCACTGACCACCCTGACTGTCCAAA...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGCTTCTTCAGGTGCTCTaGCGAGGCCAGGGCCACATC +
Preference number: 4 (lower is better)
Translates to: HTYLMNSRAGLLSSKWEPLLQVL*RGQGHI
Trigger: GATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAG...CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCGAAGCAACAGAGGCCTaGAAAAGCATTCACTGCGTG +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLEATEA*KSIHCV
Trigger: CACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTC...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACACAGGTCCAGGTCGCGGCAGAAGTTACAGCTGCGGCAGATGACCTCAGGAAGGAAGCAACAGAGGCCTaGAAAAGCATTCACTGCGTG +
Preference number: 4 (lower is better)
Translates to: TQVQVAAEVTAAADDLRKEATEA*KSIHCV
Trigger: CACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTC...CTTCCTGAGGTCATCTGCCGCAGCTGTAACTTCTGCCGCGACCTGGACCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTGAAGCAACAGAGGCCTaGAAAAGCATTCACTGCGTG +
Preference number: 4 (lower is better)
Translates to: ATEAWKSIHCVRNGAQGTEATEA*KSIHCV
Trigger: CACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTC...AGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCGGCTTTTCCTCCCTCTaGGAGGCAGGACAAAGAACT +
Preference number: 4 (lower is better)
Translates to: VQEATEAWKSIHCVRNGAGFSSL*EAGQRT
Trigger: AGTTCTTTGTCCTGCCTCCCAGAGGGAGGAAAAGCC...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCTGAACTGTTGATCTCAACAGTGGCTTGGTCATCGAACTCCATGACAAGACAGGCCCCACCAGGGCCTTaGGAACCCGTCTCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: PELLISTVAWSSNSMTRQAPPGP*EPVSSQ
Trigger: CTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGGC...CTGTCTTGTCATGGAGTTCGATGACCAAGCCACTGTTGAGATCAACAGTTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCTTTCTGCTTCCAGCTaGTCCTGTGTGGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: VQEATEAWKSIHCVRNGALSASS*SCVEVK
Trigger: CTTCACCTCCACACAGGACCAGCTGGAAGCAGAAAG...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACGAGACATGGAGCCGTTaGCTACCACCTCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: FDELQGRVIEQQVGTGEDETWSR*LPPLLQ
Trigger: CTGAAGCAGAGGTGGTAGCCAACGGCTCCATGTCTC...GTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGCAAGTGGGATGGCCCTaGGTAAGGAAGACAGGCACA +
Preference number: 4 (lower is better)
Translates to: AGLLSSKWEPGRTGNISEQVGWP*VRKTGT
Trigger: TGTGCCTGTCTTCCTTACCCAGGGCCATCCCACTTG...CTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp TTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACGCTCTGCTTGGAAAATaGCAAGTGGGATGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: FDELQGRVIEQQVGTGEDALLGK*QVGWPW
Trigger: CCAGGGCCATCCCACTTGCCATTTTCCAAGCAGAGC...GTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CAA 72 bp TGGAAGATCTTAATCAGCTGCAGTTCCCCGCGGCGTTaGACCTCAAAGCCCTTGAGCTCAGCCAGAGAACCG +
Preference number: 4 (lower is better)
Translates to: WKILISCSSPRR*TSKPLSSAREP
Trigger: CGGTTCTCTGGCTGAGCTCAAGGGCTTTGAGGTCAAACGCCGCGGGGAACTGCAGCTGATTAAGATCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CAA 72 bp GCTACAGAGCCATACACCTCTTCCAGCGTGCTGCCCTaGAGGAAGGCCTCAAACACCGAGGATTGGAAGATC +
Preference number: 4 (lower is better)
Translates to: ATEPYTSSSVLP*RKASNTEDWKI
Trigger: GATCTTCCAATCCTCGGTGTTTGAGGCCTTCCTCAAGGGCAGCACGCTGGAAGAGGTGTATGGCTCTGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CAA 72 bp ACAGTGGCTTGGTCATCGAACTCCATGACAAGACAGTaGTCATCAGCCTCCTTTCCACCCAGGTCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: TVAWSSNSMTRQ*SSASFPPRSGR
Trigger: CCGCCCTGACCTGGGTGGAAAGGAGGCTGATGACAACTGTCTTGTCATGGAGTTCGATGACCAAGCCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGCATAGATGTTGTCTTGAGTGCCGAAACTaGGGAAGTGGCGCCATCATC +
Preference number: 4 (lower is better)
Translates to: ATEASGRSASPGCLHRCCLECRN*GSGAII
Trigger: GATGATGGCGCCACTTCCTCAGTTTCGGCACTCAAG...ACAACATCTATGCAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCTTTGCAATTTTGCCCTaGAACTTCTTGGAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLFAILP*NFLERK
Trigger: TTTTCTCTCCAAGAAGTTTCAGGGCAAAATTGCAAA...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCTTCAAACCCACCAAGTaGTTTGGCAAGTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLFKPTK*FGKSRS
Trigger: GGATCTGGACTTGCCAAATCACTTGGTGGGTTTGAA...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp GCAGAGAGGATGGCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGTTCAAACCCACCAAGTaGTTTGGCAAGTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: AERMATEASGRSASPGCLFKPTK*FGKSRS
Trigger: GGATCTGGACTTGCCAAATCACTTGGTGGGTTTGAA...CAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGCCATCCTCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp AGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTACGCGTCGCTGGCGTaGTCCTGCTCCCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: STLHTYLMNSRAGLLSSKYASLA*SCSLFF
Trigger: GAAGAACAGGGAGCAGGATCACGCCAGCGACGCGTA...CTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp TTTCCTGAGGCTGATAGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCCAGCATCAGGAAACTTaGGGGGCAGTTTGGTCGTCT +
Preference number: 4 (lower is better)
Translates to: FPEADRGFPLDPAPNKQGQHQET*GAVWSS
Trigger: AGACGACCAAACTGCCCCTCAAGTTTCCTGATGCTG...GCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCTATCAGCCTCAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp CAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCCCTCATCGGGTTCATTaGAGACACAAAAGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: QGRVIEQQVGTGEDRKHLPHRVH*RHKRGL
Trigger: AAGGCCCCTTTTGTGTCTTCAATGAACCCGATGAGG...GAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp ACAGGAAACATCTCTGAGAGCTCAGTGGAGTTCCGAGAGCCTGTGACTTTCTTCCGTCCAGGTGGTAGATaGGTGGACACTCGATGCGGC +
Preference number: 4 (lower is better)
Translates to: TGNISESSVEFREPVTFFRPGGR*VDTRCG
Trigger: GCCGCATCGAGTGTCCACTCATCTACCACCTGGACG...GAAGAAAGTCACAGGCTCTCGGAACTCCACTGAGCTCTCAGAGATGTTTCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CTGGGTGATGATGTTGGCCCCTGTGAAGCAGACGATGCCAGCCATCTCCATGGAGCTCTTCCACCTTGGTaGTGTGGATCTTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: LGDDVGPCEADDASHLHGALPPW*CGSSCR
Trigger: CCTACAAGAAGATCCACATCACCAAGGTGGAAGAGC...TCCATGGAGATGGCTGGCATCGTCTGCTTCACAGGGGCCAACATCATCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGGATACTCCCTGGTTAAAGATGCTGTTCTCTaGGCGGGTGACGTAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LCGPVRGGTGRYGGYSLVKDAVL*AGDVGE
Trigger: CTCACCTACGTCACCCGCTCAGAGAACAGCATCTTT...AACCAGGGAGTATCCGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTAAAGATGCTGTTCTCTaGGCGGGTGACGTAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RAGLLSSKWEPGRTGNISKDAVL*AGDVGE
Trigger: CTCACCTACGTCACCCGCTCAGAGAACAGCATCTTT...AGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCACACGTAGCCAGTCGGGGTGTTTaGCACGTGGCACTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LIHLVCDVGVQGQHLAHVASRGV*HVALGS
Trigger: AGAACCCAGTGCCACGTGTCAAACACCCCGACTGGC...TACGTGTGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGCTTCCTCTTCACAGTaGCAGGGGCTGCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: HLAHVFDELQGRVIEQQVASSSQ*QGLLGE
Trigger: CTCACCCAGCAGCCCCTGTCACTGTGAAGAGGAAGC...CACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GTAGAACACACGGGGGATGCTCAGCCTGATGCAGTGCAAGTCACTGCCAACGAGAACAGTAACGGAACCTaGGTCTCATATACGCCCTCG +
Preference number: 4 (lower is better)
Translates to: VEHTGDAQPDAVQVTANENSNGT*VSYTPS
Trigger: CGAGGGCGTATATGAGACTCAGGTTCCGTTACTGTT...CTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAGCATCCCCCGTGTGTTCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ACTCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTCACCAGCTGTTTATTaGCCACACACACACAGCCCA +
Preference number: 4 (lower is better)
Translates to: TRRHPPGEAGLGSAYSPGSPAVY*PHTHSP
Trigger: TGGGCTGTGTGTGTGTGGTCAATAAACAGCTGGTGA...ACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TCAAAGCCCTTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCCTGGTTCCAGGTAGCTaGACTGGGCCAGAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: SKPLSSAREPSSLNTAYLLVPGS*TGPESA
Trigger: TGCGCTCTCTGGCCCAGTTCAGCTACCTGGAACCAG...GAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAAGGGCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CACTGGGTTCTTTACCTGCTGCAGGGCCGCAGGGATGGTGATGATCTTCTGGATCCAGGACCCCATAGTTaGTCTTGTCAGCCACACAGA +
Preference number: 4 (lower is better)
Translates to: HWVLYLLQGRRDGDDLLDPGPHS*SCQPHR
Trigger: TCTGTGTGGCTGACAAGATCAACTATGGGGTCCTGG...ATCCAGAAGATCATCACCATCCCTGCGGCCCTGCAGCAGGTAAAGAACCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ACACAGGTCCAGGTCGCGGCAGAAGTTACAGCTGCGGCAGATGACCTCAGGAAGTTCCCAATGGGAATGTaGAAGTACCTGCTCATCTCG +
Preference number: 4 (lower is better)
Translates to: TQVQVAAEVTAAADDLRKFPMGM*KYLLIS
Trigger: CGAGATGAGCAGGTACTTTCACATTCCCATTGGGAA...CTTCCTGAGGTCATCTGCCGCAGCTGTAACTTCTGCCGCGACCTGGACCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCTCCACGTTGGATTCCTCCGCCTCTTCCTCCTCCTCCCCATCTCTTTCCTCCTTTCCCAATGGGAATGTaGAAGTACCTGCTCATCTCG +
Preference number: 4 (lower is better)
Translates to: PPRWIPPPLPPPPHLFPPFPMGM*KYLLIS
Trigger: CGAGATGAGCAGGTACTTTCACATTCCCATTGGGAA...AGGAGGAAAGAGATGGGGAGGAGGAGGAAGAGGCGGAGGAATCCAACGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCGATGGCCTCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAATGGAAGGTCTCCTTTaGATGGATGCTGCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: AMASDSRWQGQTKAGSGPMEGLL*MDAAGD
Trigger: ATCACCAGCAGCATCCATTCAAAGGAGACCTTCCAT...TGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGCCATCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACTGGGTTCTTTACCTGCTGCAGGGCCGCAGGGATGGTGATGATCTTCTGGATAATCCTGAGAGAAGGTaGTCATTCCGGGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: HWVLYLLQGRRDGDDLLDNPERR*SFREGL
Trigger: GAGCCCTTCCCGGAATGATCACCTTCTCTCAGGATT...ATCCAGAAGATCATCACCATCCCTGCGGCCCTGCAGCAGGTAAAGAACCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTATGGTGAAGAAGCTCTaGGTGAGCTCATTTGCGACA +
Preference number: 4 (lower is better)
Translates to: ATEAWKSIHCVRNGAQGTMVKKL*VSSFAT
Trigger: TGTCGCAAATGAGCTCACTCAGAGCTTCTTCACCAT...AGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GATCATGCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTAGTTCCGAGAGCCTGTaGCTTTCTTCTGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: DHAPGSMALPVQDPIVDLSSESL*LSSESS
Trigger: AGAAGATTCAGAAGAAAGTCACAGGCTCTCGGAACT...AAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCATGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGACAGGAAACATCTCTaGGAGCTCAGTGGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: RAGLLSSKWEPGRTGNISDRKHL*ELSGVP
Trigger: CGGAACTCCACTGAGCTCTCAGAGATGTTTCCTGTC...AGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACGACAGGAAACATCTCTaGGAGCTCAGTGGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: FDELQGRVIEQQVGTGEDDRKHL*ELSGVP
Trigger: CGGAACTCCACTGAGCTCTCAGAGATGTTTCCTGTC...GTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGACCGCCCCATCCTCTaGGAAGGAAGAGTCTTTACA +
Preference number: 4 (lower is better)
Translates to: RAGLLSSKWEPGRTGNISDRPIL*EGRVFT
Trigger: TGTAAAGACTCTTCCTTCTCAGAGGATGGGGCGGTC...AGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGAGCGCAGTGAGCCAAAAGTaGGGTGCACAGAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: GLLSSKWEPGRTGNISESAVSQK*GAQRSC
Trigger: ACAAGACCTCTGTGCACCTCACTTTTGGCTCACTGC...GCTCTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCTTGTTTGGTGCCCTGTaGAATTGGCCTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRLFGAL*NWPFFF
Trigger: AAAGAAGAAAGGCCAATTTCACAGGGCACCAAACAA...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCGGGTGTCTGCATTTCTaGTTTACATTTCATACTTGT +
Preference number: 4 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGAGCLHF*FTFHTC
Trigger: ACAAGTATGAAATGTAAATCAGAAATGCAGACACCC...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGGGCTGGAGATCCCTGTaGTGTACCTTTGGTCACATC +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQGWRSL*CTFGHI
Trigger: GATGTGACCAAAGGTACATCACAGGGATCTCCAGCC...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR TCA 90 bp ATGGCATCTTCCACACGGCGCTTCTTTGTACAGAGGATGATGCGGTTGAAGTTGCAGACTGATGGCTCCTaGCCCTCAACCACGCCCTCT +
Preference number: 4 (lower is better)
Translates to: MASSTRRFFVQRMMRLKLQTDGS*PSTTPS
Trigger: AGAGGGCGTGGTTGAGGGTCAGGAGCCATCAGTCTG...CAACTTCAACCGCATCATCCTCTGTACAAAGAAGCGCCGTGTGGAAGATGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR TCA 90 bp CTGGGTGATGATGTTGGCCCCTGTGAAGCAGACGATGCCAGCCATCTCCATGGAACATGTCTACGTTTCTaGGTAACCACGCGCATGCGT +
Preference number: 4 (lower is better)
Translates to: LGDDVGPCEADDASHLHGTCLRF*VTTRMR
Trigger: ACGCATGCGCGTGGTTACTCAGAAACGTAGACATGT...TCCATGGAGATGGCTGGCATCGTCTGCTTCACAGGGGCCAACATCATCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGGATACTCCCTGGTTAGTTCGAGGCCACAGTaGGCTATGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: LCGPVRGGTGRYGGYSLVSSRPQ*AMIAPL
Trigger: CAGTGGTGCAATCATAGCTCACTGTGGCCTCGAACT...AACCAGGGAGTATCCGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS-3UTR TCA 90 bp AGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGGGTGAAAGGATCGCTTaGGCCCAGGAGTTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: STLHTYLMNSRAGLLSSKGERIA*AQEFEA
Trigger: GGCCTCGAACTCCTGGGCTCAAGCGATCCTTTCACC...CTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS-3UTR GCA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGCCACTTTTGCAATTTTaGCCTGAAACTTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQPLLQF*PETSWR
Trigger: TCTCCAAGAAGTTTCAGGGCAAAATTGCAAAAGTGG...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR GCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGATGACACCGCCCCTCTaGAGAACACTGGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQMTPPL*RTLESR
Trigger: TCTGCTTTCCAGTGTTCTGCAGAGGGGCGGTGTCAT...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320574.10
CDS-3UTR GCA 90 bp GGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGAGCAAGCCTATCTCCTGCTaGATGCTCAGACCGTGGACT +
Preference number: 4 (lower is better)
Translates to: GLLSSKWEPGRTGNISESKPISC*MLRPWT
Trigger: AGTCCACGGTCTGAGCATGCAGCAGGAGATAGGCTT...GCTCTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CGCACCATATACCATCTGTGTCCAGCTCTAAGGGCCTCCCAATCTGCTCGATCATGGAAGCCTATCTCCTaGTGCATGCTCAGACCGTGG +
Preference number: 4 (lower is better)
Translates to: RTIYHLCPALRASQSARSWKPIS*CMLRPW
Trigger: CCACGGTCTGAGCATGCAGCAGGAGATAGGCTTCCA...TGATCGAGCAGATTGGGAGGCCCTTAGAGCTGGACACAGATGGTATATGGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGAGAAGGAGTTCAGGATaGACTTGTGGGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQRRSSG*TCGPAA
Trigger: TGCAGCTGGCCCACAAGTGCATCCTGAACTCCTTCT...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TCGGTTCAGCTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTAAGGGCCTCCCAATCTaGTCGATCAGCTCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: SVQLIHLVCDVGVQGQHLKGLPI*SISSRA
Trigger: GGCACGGGAGCTGATCGAGCAGATTGGGAGGCCCTT...AAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAACCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTGGGTGATGATGTTGGCCCCTGTGAAGCAGACGATGCCAGCCATCTCCATGGAAAGATCTTAATCAGCTaGAGTTCCCCGCGGCGTTTG +
Preference number: 4 (lower is better)
Translates to: LGDDVGPCEADDASHLHGKILIS*SSPRRL
Trigger: CAAACGCCGCGGGGAACTGCAGCTGATTAAGATCTT...TCCATGGAGATGGCTGGCATCGTCTGCTTCACAGGGGCCAACATCATCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGCATGTTGGCTGCCTTaGTGTACAGCACGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: HTYLMNSRAGLLSSKWEPACWLP*CTARPA
Trigger: GGCTGGACGTGCTGTACAGCAAGGCAGCCAACATGC...CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ACAGATAGGCACCAGTGGGAATTCCTCCAAGACAGGAATTTCACTGGCCAGCCTGCGGCAACTCAGCCCTaGATCCTTGACCATCTGGTC +
Preference number: 4 (lower is better)
Translates to: TDRHQWEFLQDRNFTGQPAATQP*ILDHLV
Trigger: GACCAGATGGTCAAGGATGCAGGGCTGAGTTGCCGC...AGGCTGGCCAGTGAAATTCCTGTCTTGGAGGAATTCCCACTGGTGCCTATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGACCTCACCGTGGGCTCTaGTTGGAAAATGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRPHRGL*LENGKW
Trigger: CCACTTGCCATTTTCCAAGCAGAGCCCACGGTGAGG...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGCATTTCCGGAGAAAGTaGTTCCTCACCGTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: AGLLSSKWEPGRTGNISEHFRRK*FLTVGS
Trigger: AGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATG...CTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GTTCAGCTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCAGGGTTCTTTACCTGCTaGAGGGCCGCAGGGATGGTG +
Preference number: 4 (lower is better)
Translates to: VQLIHLVCDVGVQGQHLAGFFTC*RAAGMV
Trigger: CACCATCCCTGCGGCCCTGCAGCAGGTAAAGAACCC...TGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCGCTTTGTGGGCCTGTaGGTGGTGGTACAGGTAGAT +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKIRFVGL*VVVQVD
Trigger: ATCTACCTGTACCACCACGCACAGGCCCACAAAGCG...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGTGGGCATCTGGTTGCTaGGCACAGTGTCCAGCACAA +
Preference number: 4 (lower is better)
Translates to: HVFDELQGRVIEQQVGTGWASGC*AQCPAQ
Trigger: TTGTGCTGGACACTGTGCGCAGCAACCAGATGCCCA...CCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTGGGTGATGATGTTGGCCCCTGTGAAGCAGACGATGCCAGCCATCTCCATGGACTTCAGGTCAGTTTCTaGCCGAACTTCGAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: LGDDVGPCEADDASHLHGLQVSF*PNFEGV
Trigger: CACACCTTCGAAGTTCGGGCAGAAACTGACCTGAAG...TCCATGGAGATGGCTGGCATCGTCTGCTTCACAGGGGCCAACATCATCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GCGATACGAAGCACCCTCCTCCGCTTTAGCGACTCGCTGGTTCACGTAGAACACCTTCAGGTCAGTTTCTaGCCGAACTTCGAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: AIRSTLLRFSDSLVHVEHLQVSF*PNFEGV
Trigger: CACACCTTCGAAGTTCGGGCAGAAACTGACCTGAAG...GTGTTCTACGTGAACCAGCGAGTCGCTAAAGCGGAGGAGGGTGCTTCGTATCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTCCTCCAGGGAGGCCTaGTGGATCACGTCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: STLHTYLMNSRAGLLSSKSSREA*WITSKL
Trigger: CAGCTTCGACGTGATCCAGCAGGCCTCCCTGGAGGA...CTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCATCCTCTGCTCCCCCTaGTTTCTGGGAGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKIILCSP*FLGVLQ
Trigger: CTGCAAGACTCCCAGAAAGCAGGGGGAGCAGAGGAT...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGATCCTCTGCTCCCCCTaGTTTCTGGGAGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: VFDELQGRVIEQQVGTGEILCSP*FLGVLQ
Trigger: CTGCAAGACTCCCAGAAAGCAGGGGGAGCAGAGGAT...CTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGTTCCTGCTCATCCTCTaGTCCCCCTGCTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: HVFDELQGRVIEQQVGTGFLLIL*SPCFLG
Trigger: TCCCAGAAAGCAGGGGGAGCAGAGGATGAGCAGGAA...CCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACTCGTCCTCATTTTCCTaGTCATCCTCTGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: FDELQGRVIEQQVGTGEDSSSFS*SSSAPP
Trigger: AGGGGGAGCAGAGGATGAGCAGGAAAATGAGGACGA...GTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGGTTCTGGCAGGAGGCTaGCTGTGGCAAAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: AGLLSSKWEPGRTGNISEVLAGG*LWQKLQ
Trigger: TTGCAGTTTTTGCCACAGGCAGCCTCCTGCCAGAAC...CTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TTTCCTGAGGCTGATAGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCGTTCTGGCAGGAGGCTaGCTGTGGCAAAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: FPEADRGFPLDPAPNKQGVLAGG*LWQKLQ
Trigger: TTGCAGTTTTTGCCACAGGCAGCCTCCTGCCAGAAC...GCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCTATCAGCCTCAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAAGTCTCCCGCGCAGCTaGAGTACACAGGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: LAHVFDELQGRVIEQQVGSLPRS*STQACW
Trigger: CCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGACT...TCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGAGTCTCCCGCGCAGCTaGAGTACACAGGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: HLAHVFDELQGRVIEQQVSLPRS*STQACW
Trigger: CCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGACT...CACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CAGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAAGTCTCCCGCGCAGCTaGAGTACACAGGCATGCTGG +
Preference number: 4 (lower is better)
Translates to: QHLAHVFDELQGRVIEQQSLPRS*STQACW
Trigger: CCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGACT...TTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TGTAGACCATGTTGGAGCGAGGAAGGACCCGATTTACCTTGCGATACGAAGCACAGCTGTGGGTTCTTCTaGAGCAGCCACTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: CRPCWSEEGPDLPCDTKHSCGFF*SSHSRV
Trigger: GACCCTGGAGTGGCTGCTGCAGAAGAACCCACAGCT...GTGCTTCGTATCGCAAGGTAAATCGGGTCCTTCCTCGCTCCAACATGGTCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCAGCCCATTTCTCCATaGAAACAGGTGAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: LQGRVIEQQVGTGEDRKHQPISP*KQVRLQ
Trigger: CTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTG...ATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGGTGAAGGACAAGGGCTaGAGTGAGCCAAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQVKDKG*SEPKVR
Trigger: CCTCACTTTTGGCTCACTGCAGCCCTTGTCCTTCAC...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCCTCCAGTTCATACTTGTTTGGTaGCCTGTGAAATTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: IVAGRGTGSLTTRDHVLQFILVW*PVKLAF
Trigger: AAAGGCCAATTTCACAGGGCACCAAACAAGTATGAA...CTGGAGGACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CACTGGGTTCTTTACCTGCTGCAGGGCCGCAGGGATGGTGATGATCTTCTGGATACTGGCAACCGTCAGTaGTTCCCTTTCACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: HWVLYLLQGRRDGDDLLDTGNRQ*FPFTGG
Trigger: TCCTCCAGTGAAAGGGAAGCACTGACGGTTGCCAGT...ATCCAGAAGATCATCACCATCCCTGCGGCCCTGCAGCAGGTAAAGAACCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp ACACAGGTCCAGGTCGCGGCAGAAGTTACAGCTGCGGCAGATGACCTCAGGAAGTGTACAGGTAGTAAGTaGCGACAGCATCTGACACAG +
Preference number: 4 (lower is better)
Translates to: TQVQVAAEVTAAADDLRKCTGSK*RQHLTQ
Trigger: CTGTGTCAGATGCTGTCGCCACTTACTACCTGTACA...CTTCCTGAGGTCATCTGCCGCAGCTGTAACTTCTGCCGCGACCTGGACCTGTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GAGCCATTTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTGCTTGGAAAATGGCAAGATGATGTTGGCGTaGAAGGCCTGCACCATCAGC +
Preference number: 4 (lower is better)
Translates to: EPFPEKVLPHRGLCLENGKMMLA*KACTIS
Trigger: GCTGATGGTGCAGGCCTTCCACGCCAACATCATCTT...GCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGTCTTCCTCAAGGGCGTaGCGCAAGGTCTTCTCAACC +
Preference number: 4 (lower is better)
Translates to: VFDELQGRVIEQQVGTGESSSRA*RKVFST
Trigger: GGTTGAGAAGACCTTGCGCCACGCCCTTGAGGAAGA...CTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCAGGCCATCTTCCGCTaGCAGTTTGCTCCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: RFSRVRVWIPGETSPQTAQAIFR*QFAPGL
Trigger: TAAGCCTGGAGCAAACTGCCAGCGGAAGATGGCCTG...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CCA 90 bp CCTTGTAGGCGAGCAGGAATCGCTGGATGGCTCTGCAGATGGTCTTCAGGTCAGTTCTCTGACTCCAGCTaGTGCTGGATCCGATGGTAT +
Preference number: 4 (lower is better)
Translates to: PCRRAGIAGWLCRWSSGQFSDSS*CWIRWY
Trigger: ATACCATCGGATCCAGCACCAGCTGGAGTCAGAGAA...CTGACCTGAAGACCATCTGCAGAGCCATCCAGCGATTCCTGCTCGCCTACAAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCTTTCTGGGAAGCTGTTaGGCAGGACGCACCATATAC +
Preference number: 4 (lower is better)
Translates to: VQEATEAWKSIHCVRNGAFLGSC*AGRTIY
Trigger: GTATATGGTGCGTCCTGCCCAACAGCTTCCCAGAAA...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGAGCCAGCTCCTGGTACTaGTCATTGGTGAAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRASSWY*SLVKPS
Trigger: GGAAGGCTTCACCAATGACCAGTACCAGGAGCTGGC...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCTCAAACACCGAGGATTaGAAGATCTTAATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLSNTED*KILISC
Trigger: GCAGCTGATTAAGATCTTCCAATCCTCGGTGTTTGA...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGTGAGTGCTTCCTCACCGTaGGCTCTGCTTGGAAAATGG +
Preference number: 4 (lower is better)
Translates to: PTSTRRSRSRFSLFTWFVSASSP*ALLGKW
Trigger: CCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACT...CACAAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ATGGCATCTTCCACACGGCGCTTCTTTGTACAGAGGATGATGCGGTTGAAGTTGACAAGCCATTCCTCCTaGCTGGTTCCCAGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: MASSTRRFFVQRMMRLKLTSHSS*LVPRAG
Trigger: TCCCGCCCTGGGAACCAGCCAGGAGGAATGGCTTGT...CAACTTCAACCGCATCATCCTCTGTACAAAGAAGCGCCGTGTGGAAGATGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GTAGAACACACGGGGGATGCTCAGCCTGATGCAGTGCAAGTCACTGCCAACGAGGATTGTAGACCATGTTaGAGCGAGGAAGGACCCGAT +
Preference number: 4 (lower is better)
Translates to: VEHTGDAQPDAVQVTANEDCRPC*SEEGPD
Trigger: ATCGGGTCCTTCCTCGCTCCAACATGGTCTACAATC...CTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAGCATCCCCCGTGTGTTCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGACAGATAGGCACCAGTaGGAATTCCTCCAAGACAGG +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVTDRHQ*EFLQDR
Trigger: CCTGTCTTGGAGGAATTCCCACTGGTGCCTATCTGT...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCGATGGCCTCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCACTGGTAGGTTCCCAATaGGAATGTGAAAGTACCTGC +
Preference number: 4 (lower is better)
Translates to: AMASDSRWQGQTKAGSGPLVGSQ*ECESTC
Trigger: GCAGGTACTTTCACATTCCCATTGGGAACCTACCAG...TGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGCCATCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCGCTCCACACACACTGTaGAGTAACAGCCTGAACTGT +
Preference number: 4 (lower is better)
Translates to: VQEATEAWKSIHCVRNGAAPHTL*SNSLNC
Trigger: ACAGTTCAGGCTGTTACTCCACAGTGTGTGTGGAGC...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACTTATTGAGCAGCAAGTaGGAACCGGGGAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: FDELQGRVIEQQVGTGEDLLSSK*EPGRTG
Trigger: TCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAA...GTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACTGGGTTCTTTACCTGCTGCAGGGCCGCAGGGATGGTGATGATCTTCTGGATTTATTGAGCAGCAAGTaGGAACCGGGGAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: HWVLYLLQGRRDGDDLLDLLSSK*EPGRTG
Trigger: TCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAA...ATCCAGAAGATCATCACCATCCCTGCGGCCCTGCAGCAGGTAAAGAACCCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCTTCAGCTTATTCACCTaGTTTGTGATGTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRFSLFT*FVMLVS
Trigger: GGACACCAACATCACAAACCAGGTGAATAAGCTGAA...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGGATACTCCCTGGTTATGAAGACCTGGGTGTaGATGGTGAGGGCGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LCGPVRGGTGRYGGYSLVMKTWV*MVRAKS
Trigger: AGACTTCGCCCTCACCATCCACACCCAGGTCTTCAT...AACCAGGGAGTATCCGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGTGTTCCATGAAGACCTaGGTGTGGATGGTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: YLMNSRAGLLSSKWEPGRCSMKT*VWMVRA
Trigger: CGCCCTCACCATCCACACCCAGGTCTTCATGGAACA...CCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGTGTTCCATGAAGACCTaGGTGTGGATGGTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: VFDELQGRVIEQQVGTGECSMKT*VWMVRA
Trigger: CGCCCTCACCATCCACACCCAGGTCTTCATGGAACA...CTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCTAATGGCCCAGCTGTaGGTTCTTCTGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RFSRVRVWIPGETSPQTALMAQL*VLLQQP
Trigger: TGGCTGCTGCAGAAGAACCCACAGCTGGGCCATTAG...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ATATACCATCTGTGTCCAGCTCTAAGGGCCTCCCAATCTGCTCGATCAGCTCCCAGTCAGGGTGGTCAGTaGTCTGGTCACTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: IYHLCPALRASQSARSAPSQGGQ*SGHWKH
Trigger: GTGCTTCCAGTGACCAGACCACTGACCACCCTGACT...GGGAGCTGATCGAGCAGATTGGGAGGCCCTTAGAGCTGGACACAGATGGTATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CGCAGCACCTCGTCGGGCTCCATGGGAATAATGGTGCACAGAGCAAAGATGAATAGTCAGGGTGGTCAGTaGTCTGGTCACTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: RSTSSGSMGIMVHRAKMNSQGGQ*SGHWKH
Trigger: GTGCTTCCAGTGACCAGACCACTGACCACCCTGACT...ATTCATCTTTGCTCTGTGCACCATTATTCCCATGGAGCCCGACGAGGTGCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp AGATGTCCTCTGGTAGGTTCCCAATGGGAATGTGAAAGTACCTGCTCATCTCGACCCCGTTCCCTGGCCTaGGGTCACAGGTTTGGACAG +
Preference number: 4 (lower is better)
Translates to: RCPLVGSQWECESTCSSRPRSLA*GHRFGQ
Trigger: CTGTCCAAACCTGTGACCCCAGGCCAGGGAACGGGG...TCGAGATGAGCAGGTACTTTCACATTCCCATTGGGAACCTACCAGAGGACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ATGGCATCTTCCACACGGCGCTTCTTTGTACAGAGGATGATGCGGTTGAAGTTGCCACCCCACCAGGTGTaGTGCAGGAAGCAACAGAGG +
Preference number: 4 (lower is better)
Translates to: MASSTRRFFVQRMMRLKLPPHQV*CRKQQR
Trigger: CCTCTGTTGCTTCCTGCACCACACCTGGTGGGGTGG...CAACTTCAACCGCATCATCCTCTGTACAAAGAAGCGCCGTGTGGAAGATGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGGATACTCCCTGGTTCTTTCTGCTTCCAGCTaGTCCTGTGTGGAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LCGPVRGGTGRYGGYSLVLSASS*SCVEVK
Trigger: CTTCACCTCCACACAGGACCAGCTGGAAGCAGAAAG...AACCAGGGAGTATCCGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACTCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTGTGAGGCTCTCGTCTaGGGTGTCTGCATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: TRRHPPGEAGLGSAYSPGCEALV*GVCISD
Trigger: ATCAGAAATGCAGACACCCCAGACGAGAGCCTCACA...ACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CTGGGTGATGATGTTGGCCCCTGTGAAGCAGACGATGCCAGCCATCTCCATGGATGTGAGGCTCTCGTCTaGGGTGTCTGCATTTCTGAT +
Preference number: 4 (lower is better)
Translates to: LGDDVGPCEADDASHLHGCEALV*GVCISD
Trigger: ATCAGAAATGCAGACACCCCAGACGAGAGCCTCACA...TCCATGGAGATGGCTGGCATCGTCTGCTTCACAGGGGCCAACATCATCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS-3UTR CCA 90 bp CAGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTCCCTGGGCTGATGTaGGGACAGAGGCAGAATGCG +
Preference number: 4 (lower is better)
Translates to: QHLAHVFDELQGRVIEQQVPGLM*GQRQNA
Trigger: CGCATTCTGCCTCTGTCCCCACATCAGCCCAGGGAC...TTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR CCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCTTCAGGGGAGAAATTTaGCGCGCTCCCACCCAGACT +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKIFRGEI*RAPTQT
Trigger: AGTCTGGGTGGGAGCGCGCCAAATTTCTCCCCTGAA...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672742.1
3UTR CAA 72 bp CCCACGACCATGCTCTTCAGGATCCCTTCCATTCATTaGTGGTATGACCACAAAGGCAGCCCCTCTGACCTC +
Preference number: 4 (lower is better)
Translates to: PTTMLFRIPSIH*WYDHKGSPSDL
Trigger: GAGGTCAGAGGGGCTGCCTTTGTGGTCATACCACAAATGAATGGAAGGGATCCTGAAGAGCATGGTCGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR TCA 90 bp GCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCTTGGAGAGAAAAGATaGAACTTCTCGCTCACAACC +
Preference number: 4 (lower is better)
Translates to: ATEAWKSIHCVRNGAQGTLGEKR*NFSLTT
Trigger: GGTTGTGAGCGAGAAGTTTCATCTTTTCTCTCCAAG...AGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGTCTCCTTCCTCACTTTaGCAAGATCCTCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVSPSSL*QDPPQC
Trigger: ACACTGTGGAGGATCTTGTCAAAGTGAGGAAGGAGA...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp ATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGATCTCCTTCCTCACTTTaGCAAGATCCTCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: MNSRAGLLSSKWEPGRTGSPSSL*QDPPQC
Trigger: ACACTGTGGAGGATCTTGTCAAAGTGAGGAAGGAGA...TCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCTCTCCTTCCTCACTTTaGCAAGATCCTCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: VQEATEAWKSIHCVRNGASPSSL*QDPPQC
Trigger: ACACTGTGGAGGATCTTGTCAAAGTGAGGAAGGAGA...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGAGGTCATCTCGGCGGGTaGTTTCTACCGGAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRGHLGG*FLPEKH
Trigger: ATGCTTTTCCGGTAGAAATCACCCGCCGAGATGACC...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp AGGCTTTCCGGCAGTAATCCGCCAGCCTTCTCTTCTCGTATTTCGCCTGTTCCTCAGCATCAGGAAACTTaGGGGGCAGTTTGGTCGTCT +
Preference number: 4 (lower is better)
Translates to: RLSGSNPPAFSSRISPVPQHQET*GAVWSS
Trigger: AGACGACCAAACTGCCCCTCAAGTTTCCTGATGCTG...AGGAACAGGCGAAATACGAGAAGAGAAGGCTGGCGGATTACTGCCGGAAAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GGCATGAACTCGCCCCTCCACTGCCAGGCCATCTTCCGCTGGCAGTTTGCTCCAATTCTGGCTTGGGGGTaGACTCAAAATCTTCAATAT +
Preference number: 4 (lower is better)
Translates to: GMNSPLHCQAIFRWQFAPILAWG*TQNLQY
Trigger: ATATTGAAGATTTTGAGTTCACCCCCAAGCCAGAAT...TGGAGCAAACTGCCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGTTCATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGAGCCCCCTTGCGCATaGCATAGCCATAGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: HTYLMNSRAGLLSSKWEPEPPCA*HSHRRS
Trigger: ACTCCTTCTATGGCTATGTCATGCGCAAGGGGGCTC...CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCTGAACTGTTGATCTCAACAGTGGCTTGGTCATCGAACTCCATGACAAGACAGGGATGCCCTGCGCTGTaGGGGGATGAAGATCCCGAA +
Preference number: 4 (lower is better)
Translates to: PELLISTVAWSSNSMTRQGCPAL*GDEDPE
Trigger: TTCGGGATCTTCATCCCCTCACAGCGCAGGGCATCC...CTGTCTTGTCATGGAGTTCGATGACCAAGCCACTGTTGAGATCAACAGTTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ATAACCATGTCTACATGTTCCTTGCTGAGTAACACACAGAAGACTCAGGCTGCTGAGGCCGTGCTCTGCTaGGTACAGGGCGCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: ITMSTCSLLSNTQKTQAAEAVLC*VQGAKA
Trigger: AGCCTTGGCGCCCTGTACTCAGCAGAGCACGGCCTC...AGCAGCCTGAGTCTTCTGTGTGTTACTCAGCAAGGAACATGTAGACATGGTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp TCAAAGCCCTTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCGGCAGGTGTCCAGGTTaGGGTAGTGACGGATCATGC +
Preference number: 4 (lower is better)
Translates to: SKPLSSAREPSSLNTAYLGRCPG*GSDGSC
Trigger: GCATGATCCGTCACTACCTCAACCTGGACACCTGCC...GAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAAGGGCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CTGGGTGATGATGTTGGCCCCTGTGAAGCAGACGATGCCAGCCATCTCCATGGATTCCCAATGGGAATGTaGAAGTACCTGCTCATCTCG +
Preference number: 4 (lower is better)
Translates to: LGDDVGPCEADDASHLHGFPMGM*KYLLIS
Trigger: CGAGATGAGCAGGTACTTTCACATTCCCATTGGGAA...TCCATGGAGATGGCTGGCATCGTCTGCTTCACAGGGGCCAACATCATCACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCCACACAGATAGGCACATGTCGTTGACATGGTaGGACTGGAGAATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: ALPVQDPIVDLVSHTDRHMSLTW*DWRMVL
Trigger: CAACACCATTCTCCAGTCTCACCATGTCAACGACAT...GTGCCTATCTGTGTGGCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTGGGTGATGATGTTGGCCCCTGTGAAGCAGACGATGCCAGCCATCTCCATGGAATGGAAGGTCTCCTTTaGATGGATGCTGCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LGDDVGPCEADDASHLHGMEGLL*MDAAGD
Trigger: ATCACCAGCAGCATCCATTCAAAGGAGACCTTCCAT...TCCATGGAGATGGCTGGCATCGTCTGCTTCACAGGGGCCAACATCATCACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCTCTTGCAGTCCACAGTaGATACGAGATGAAACTTTT +
Preference number: 4 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLSCSPQ*IRDETF
Trigger: AAAAGTTTCATCTCGTATTCACTGTGGACTGCAAGA...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCTCTTGCAGTCCACAGTaGATACGAGATGAAACTTTT +
Preference number: 4 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRSCSPQ*IRDETF
Trigger: AAAAGTTTCATCTCGTATTCACTGTGGACTGCAAGA...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAACGCTGAAACAATCATaGGGAAGTAGTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: MNSRAGLLSSKWEPGRTGTLKQS*GSSSGR
Trigger: CCTGCCAGAACTACTTCCTCATGATTGTTTCAGCGT...TCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CGCAAGGTCTTCTCAACCCGCTGCAGCAGGAAGTCAAAGGCGGCAGGATTCATCACGCTGAAACAATCATaGGGAAGTAGTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RKVFSTRCSRKSKAAGFITLKQS*GSSSGR
Trigger: CCTGCCAGAACTACTTCCTCATGATTGTTTCAGCGT...GATGAATCCTGCCGCCTTTGACTTCCTGCTGCAGCGGGTTGAGAAGACCTTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCAATCCTGAGAGAAGGTaGTCATTCCGGGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKINPERR*SFREGL
Trigger: GAGCCCTTCCCGGAATGATCACCTTCTCTCAGGATT...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGAATCCTGAGAGAAGGTaGTCATTCCGGGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: VFDELQGRVIEQQVGTGENPERR*SFREGL
Trigger: GAGCCCTTCCCGGAATGATCACCTTCTCTCAGGATT...CTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCCACACAGATAGGCACATGGTGAAGAAGCTCTaGGTGAGCTCATTTGCGACA +
Preference number: 4 (lower is better)
Translates to: ALPVQDPIVDLVSHTDRHMVKKL*VSSFAT
Trigger: TGTCGCAAATGAGCTCACTCAGAGCTTCTTCACCAT...GTGCCTATCTGTGTGGCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TGCAGGGTGAAGGCCATCAGCTTCTTCTGTAGAACTTCCACCAGCGTCATCTCGGACAGGAAACATCTCTaGGAGCTCAGTGGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: CRVKAISFFCRTSTSVISDRKHL*ELSGVP
Trigger: CGGAACTCCACTGAGCTCTCAGAGATGTTTCCTGTC...CGAGATGACGCTGGTGGAAGTTCTACAGAAGAAGCTGATGGCCTTCACCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GTACAGCACGTCCAGCCAGTAGTCAGCCACCTTGGCTACAGAGCCATACACCTCTATTCACCTGGTTTGTaGTGTTGGTGTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: VQHVQPVVSHLGYRAIHLYSPGL*CWCPGT
Trigger: TGTCCCTGGACACCAACATCACAAACCAGGTGAATA...GAGGTGTATGGCTCTGTAGCCAAGGTGGCTGACTACTGGCTGGACGTGCTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATTATTCACCTGGTTTGTaGTGTTGGTGTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: LQGRVIEQQVGTGEDRKHYSPGL*CWCPGT
Trigger: TGTCCCTGGACACCAACATCACAAACCAGGTGAATA...ATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GTTCAGCTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCATACAGCTGCGGCAGATaGCCTCAGGAAGCACGTAGG +
Preference number: 4 (lower is better)
Translates to: VQLIHLVCDVGVQGQHLAYSCGR*PQEARR
Trigger: CCTACGTGCTTCCTGAGGTCATCTGCCGCAGCTGTA...TGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTACAGCTGCGGCAGATaGCCTCAGGAAGCACGTAGG +
Preference number: 4 (lower is better)
Translates to: STLHTYLMNSRAGLLSSKYSCGR*PQEARR
Trigger: CCTACGTGCTTCCTGAGGTCATCTGCCGCAGCTGTA...CTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ATATACCATCTGTGTCCAGCTCTAAGGGCCTCCCAATCTGCTCGATCAGCTCCCTTCCGATCTGTTCCATaGAGACCTGGGTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: IYHLCPALRASQSARSAPFRSVP*RPGCGW
Trigger: CCATCCACACCCAGGTCTTCATGGAACAGATCGGAA...GGGAGCTGATCGAGCAGATTGGGAGGCCCTTAGAGCTGGACACAGATGGTATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTGCAGTGAGCCAAAAGTaGGGTGCACAGAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: RFSRVRVWIPGETSPQTAAVSQK*GAQRSC
Trigger: ACAAGACCTCTGTGCACCTCACTTTTGGCTCACTGC...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGGACAAGGGCTGCAGTaGGCCAAAAGTGAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: TLHTYLMNSRAGLLSSKWGQGLQ*AKSEVH
Trigger: GTGCACCTCACTTTTGGCTCACTGCAGCCCTTGTCC...CCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGGTCGTTCAACAAGGTCATCTCGGCGGGTGATTTCTACCGGAAAAGCATTTCCGGACAAGGGCTGCAGTaGGCCAAAAGTGAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: RSFNKVISAGDFYRKSISGQGLQ*AKSEVH
Trigger: GTGCACCTCACTTTTGGCTCACTGCAGCCCTTGTCC...GGAAATGCTTTTCCGGTAGAAATCACCCGCCGAGATGACCTTGTTGAACGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS-3UTR TCA 90 bp TCGGTTCAGCTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTATGCTCTCCGCAGACTaGTGGCTCCTGACCCTCAAC +
Preference number: 4 (lower is better)
Translates to: SVQLIHLVCDVGVQGQHLMLSAD*WLLTLN
Trigger: GTTGAGGGTCAGGAGCCATCAGTCTGCGGAGAGCAT...AAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR GCA 90 bp ACTCGCCCCTCCACTGCCAGGCCATCTTCCGCTGGCAGTTTGCTCCAGGCTTATAAAATCTCGGTAGGATaGATGTTAATGAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TRPSTARPSSAGSLLQAYKISVG*MLMSQP
Trigger: AGGCTGGCTCATTAACATGCATCCTACCGAGATTTT...ATAAGCCTGGAGCAAACTGCCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGTGTTCCTGGTCAAAGTTGGTGACTTaGTCCACAGGCACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PSMSGADSSALISLMCSWSKLVT*STGTFS
Trigger: GGAGAAAGTGCCTGTGGAGCAAGTCACCAACTTTGA...CCAGGAACACATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp ATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGATCAAAGTTGGTGACTTaGTCCACAGGCACTTTCTCC +
Preference number: 4 (lower is better)
Translates to: MNSRAGLLSSKWEPGRTGSKLVT*STGTFS
Trigger: GGAGAAAGTGCCTGTGGAGCAAGTCACCAACTTTGA...TCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGCTTCCGCTGGCAGTTTaGTCCAGGCTTATTGAAGTC +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQLPLAV*SRLIEV
Trigger: GACTTCAATAAGCCTGGAGCAAACTGCCAGCGGAAG...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR GCA 90 bp TCATATACGCCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGTCTGACTCCAGCTGGTaGTGGATCCGATGGTATTCG +
Preference number: 4 (lower is better)
Translates to: SYTPSMSGADSSALISLMSDSSW*WIRWYS
Trigger: CGAATACCATCGGATCCAGCACCAGCTGGAGTCAGA...CATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGGCGTATATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp TCGGTTCAGCTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCGGCAACTCAGCCCTaGATCCTTGACCATCTGGTC +
Preference number: 4 (lower is better)
Translates to: SVQLIHLVCDVGVQGQHLAATQP*ILDHLV
Trigger: GACCAGATGGTCAAGGATGCAGGGCTGAGTTGCCGC...AAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTCGTCGGGCTCCATGGGAATAATGGTGCACAGAGCAAAGATGAATGGGTGGACCATTTCCGGAGAAAGTaGTTCCTCACCGTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LVGLHGNNGAQSKDEWVDHFRRK*FLTVGS
Trigger: AGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATG...GTCCACCCATTCATCTTTGCTCTGTGCACCATTATTCCCATGGAGCCCGACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGACATTTCCGGAGAAAGTaGTTCCTCACCGTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRHFRRK*FLTVGS
Trigger: AGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATG...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCTGATCTGCACAATCTaGCACGGAAGGTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKILICTI*HGRSRM
Trigger: CATCCTGGACCTTCCGTGGCAGATTGTGCAGATCAG...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGCGCTTTGTGGGCCTGTaGGTGGTGGTACAGGTAGAT +
Preference number: 4 (lower is better)
Translates to: HTYLMNSRAGLLSSKWEPRFVGL*VVVQVD
Trigger: ATCTACCTGTACCACCACGCACAGGCCCACAAAGCG...CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCAGCCCATCACCTGGTTGTCTaGATAGATGTTGTGGTACTG +
Preference number: 4 (lower is better)
Translates to: CEAVGPAHFSMQTGETPAHHLVV*IDVVVL
Trigger: CAGTACCACAACATCTATGCAGACAACCAGGTGATG...GGCTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TGTAGACCATGTTGGAGCGAGGAAGGACCCGATTTACCTTGCGATACGAAGCACATCCTCTGCTCCCCCTaGTTTCTGGGAGTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: CRPCWSEEGPDLPCDTKHILCSP*FLGVLQ
Trigger: CTGCAAGACTCCCAGAAAGCAGGGGGAGCAGAGGAT...GTGCTTCGTATCGCAAGGTAAATCGGGTCCTTCCTCGCTCCAACATGGTCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCTTCCTGCTCATCCTCTaGTCCCCCTGCTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: AHVFDELQGRVIEQQVGTFLLIL*SPCFLG
Trigger: TCCCAGAAAGCAGGGGGAGCAGAGGATGAGCAGGAA...GGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TCATATACGCCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGTCGTCCTCATTTTCCTaGTCATCCTCTGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: SYTPSMSGADSSALISLMSSSFS*SSSAPP
Trigger: AGGGGGAGCAGAGGATGAGCAGGAAAATGAGGACGA...CATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGGCGTATATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCGTTCTGGCAGGAGGCTaGCTGTGGCAAAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKIVLAGG*LWQKLQ
Trigger: TTGCAGTTTTTGCCACAGGCAGCCTCCTGCCAGAAC...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TCGGTTCAGCTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTTCAGCCCGTCCTTCATaGAGTGGTACACGGCCACGA +
Preference number: 4 (lower is better)
Translates to: SVQLIHLVCDVGVQGQHLSARPS*SGTRPR
Trigger: TCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGA...AAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TCGGTTCAGCTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTTGCAGTACACAGGCATaGTGGTCTCCTTCACCCCGC +
Preference number: 4 (lower is better)
Translates to: SVQLIHLVCDVGVQGQHLCSTQA*WSPSPR
Trigger: GCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCA...AAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGCAGCCCATTTCTCCATaGAAACAGGTGAGACTCCAG +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQQPISP*KQVRLQ
Trigger: CTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTG...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCACACGTAAGCTGCCCTCAACCATaGTCTCCGCAGACTGATGGC +
Preference number: 4 (lower is better)
Translates to: LIHLVCDVGVQGQHLAHVSCPQP*SPQTDG
Trigger: GCCATCAGTCTGCGGAGAGCATGGTTGAGGGCAGCT...TACGTGTGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR CCA 90 bp ATGGCATCTTCCACACGGCGCTTCTTTGTACAGAGGATGATGCGGTTGAAGTTGCCGAAACTGAGGAAGTaGCGCCATCATCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: MASSTRRFFVQRMMRLKLPKLRK*RHHPCW
Trigger: CCAGCAGGGATGATGGCGCCACTTCCTCAGTTTCGG...CAACTTCAACCGCATCATCCTCTGTACAAAGAAGCGCCGTGTGGAAGATGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp TTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAATCCATGTGGATGCACTaGGGCGCCTTGTACTCCCCC +
Preference number: 4 (lower is better)
Translates to: LHTYLMNSRAGLLSSKWESMWMH*GALYSP
Trigger: GGGGGAGTACAAGGCGCCCCAGTGCATCCACATGGA...TTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGTGGTTCAACATGGCGCCTaGGTAGGAGATGGTCACTTT +
Preference number: 4 (lower is better)
Translates to: PTSTRRSRSRFSLFTWFVVQHGA*VGDGHF
Trigger: AAAGTGACCATCTCCTACCCAGGCGCCATGTTGAAC...CACAAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGTGTCCAGGGACAGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTAGGCTGGAAGAATCATaGCAAGGTAGGGCCCATCAA +
Preference number: 4 (lower is better)
Translates to: GVQGQHLAHVFDELQGRVRLEES*QGRAHQ
Trigger: TTGATGGGCCCTACCTTGCCATGATTCTTCCAGCCT...AACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCTGTCCCTGGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGAGGCTGGAAGAATCATaGCAAGGTAGGGCCCATCAA +
Preference number: 4 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQRLEES*QGRAHQ
Trigger: TTGATGGGCCCTACCTTGCCATGATTCTTCCAGCCT...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCTCTTGCCTTCTTCCTTaGAGGCTGGAAGAATCATGG +
Preference number: 4 (lower is better)
Translates to: VQEATEAWKSIHCVRNGASCLLP*RLEESW
Trigger: CCATGATTCTTCCAGCCTCCAAGGAAGAAGGCAAGA...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGACAGAGTCAGGCATGTTaGCTGCCTTGCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRQSQAC*LPCCTA
Trigger: TGCTGTACAGCAAGGCAGCCAACATGCCTGACTCTG...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGAAGTGCTTCCTCACCGTaGGCTCTGCTTGGAAAATGG +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRSASSP*ALLGKW
Trigger: CCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACT...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACTGGGTTCTTTACCTGCTGCAGGGCCGCAGGGATGGTGATGATCTTCTGGATTTTGACACGTGGCACTaGGTTCTTTACCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: HWVLYLLQGRRDGDDLLDFDTWH*VLYLLQ
Trigger: CTGCAGCAGGTAAAGAACCCAGTGCCACGTGTCAAA...ATCCAGAAGATCATCACCATCCCTGCGGCCCTGCAGCAGGTAAAGAACCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGAGTGACAGGGGCTGCTaGGTGAGGCAGCTTTACGAG +
Preference number: 4 (lower is better)
Translates to: STLHTYLMNSRAGLLSSKSDRGC*VRQLYE
Trigger: CTCGTAAAGCTGCCTCACCCAGCAGCCCCTGTCACT...CTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACAGTAACGGAACCTGAGTCTCATATACGCCCTCGATGTCTGGCGCTGACAGCTATGGCGGATACTCCCTaGTTCCAGGTAGCTGAACTG +
Preference number: 4 (lower is better)
Translates to: TVTEPESHIRPRCLALTAMADTP*FQVAEL
Trigger: CAGTTCAGCTACCTGGAACCAGGGAGTATCCGCCAT...AGCTGTCAGCGCCAGACATCGAGGGCGTATATGAGACTCAGGTTCCGTTACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCCCCTCTGCAGAACACTGTGATCCCAGTTACTCAGGAGGCTGAGGTGAAAGGAGGATGGCTCTGCAGATaGTCTTCAGGTCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: APLQNTVIPVTQEAEVKGGWLCR*SSGQFL
Trigger: CAGAAACTGACCTGAAGACCATCTGCAGAGCCATCC...TCCTTTCACCTCAGCCTCCTGAGTAACTGGGATCACAGTGTTCTGCAGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS-3UTR CCA 90 bp TATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGGCAGGAATCGCTGGATaGCTCTGCAGATGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: YLMNSRAGLLSSKWEPGRAGIAG*LCRWSS
Trigger: TGAAGACCATCTGCAGAGCCATCCAGCGATTCCTGC...CCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCATATACGCCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGGCAGGAATCGCTGGATaGCTCTGCAGATGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SYTPSMSGADSSALISLMAGIAG*LCRWSS
Trigger: TGAAGACCATCTGCAGAGCCATCCAGCGATTCCTGC...CATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGGCGTATATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGATCCAGGGAGGCCTGCTaGATCACGTCGAAGCTGATC +
Preference number: 4 (lower is better)
Translates to: LAHVFDELQGRVIEQQVGSREAC*ITSKLI
Trigger: GATCAGCTTCGACGTGATCCAGCAGGCCTCCCTGGA...TCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCAGCCAAGGTCTCCTTTGAATaGATGCTGCTGGTGATGTAC +
Preference number: 4 (lower is better)
Translates to: CEAVGPAHFSMQTGETPAKVSFE*MLLVMY
Trigger: GTACATCACCAGCAGCATCCATTCAAAGGAGACCTT...GGCTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCCCCTCTGCAGAACACTGTGATCCCAGTTACTCAGGAGGCTGAGGTGAAAGGAGTAAATCCTCCACGTTaGATTCCTCCGCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: APLQNTVIPVTQEAEVKGVNPPR*IPPPLP
Trigger: AGGAAGAGGCGGAGGAATCCAACGTGGAGGATTTAC...TCCTTTCACCTCAGCCTCCTGAGTAACTGGGATCACAGTGTTCTGCAGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS-3UTR CCA 90 bp CACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGCCGTCCTTCATGCAGTaGTACACGGCCACGATGTAC +
Preference number: 4 (lower is better)
Translates to: HTYLMNSRAGLLSSKWEPPSFMQ*YTATMY
Trigger: GTACATCGTGGCCGTGTACCACTGCATGAAGGACGG...CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AGGCTTTCCGGCAGTAATCCGCCAGCCTTCTCTTCTCGTATTTCGCCTGTTCCTTTTGGACAGTCAGGGTaGTCAGTGGTCTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: RLSGSNPPAFSSRISPVPFGQSG*SVVWSL
Trigger: CAGTGACCAGACCACTGACCACCCTGACTGTCCAAA...AGGAACAGGCGAAATACGAGAAGAGAAGGCTGGCGGATTACTGCCGGAAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGTTTGGACAGTCAGGGTaGTCAGTGGTCTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: VFDELQGRVIEQQVGTGEFGQSG*SVVWSL
Trigger: CAGTGACCAGACCACTGACCACCCTGACTGTCCAAA...CTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGAAGCAACAGAGGCCTaGAAAAGCATTCACTGCGTG +
Preference number: 4 (lower is better)
Translates to: SPTSTRRSRSRFSLFTWFEATEA*KSIHCV
Trigger: CACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTC...AAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TTTCCTGAGGCTGATAGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCGCCTCAGACAGTAGATaGCAGGGACAAACTAAGGCT +
Preference number: 4 (lower is better)
Translates to: FPEADRGFPLDPAPNKQGASDSR*QGQTKA
Trigger: AGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGC...GCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCTATCAGCCTCAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGAGCGCCTCAGACAGTAGATaGCAGGGACAAACTAAGGCT +
Preference number: 4 (lower is better)
Translates to: GLLSSKWEPGRTGNISESASDSR*QGQTKA
Trigger: AGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGC...GCTCTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGATGAACCACCGCTGGTaGGTAATGCGAGTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: HTYLMNSRAGLLSSKWEPMNHRW*VMRVAA
Trigger: GGCAGCTACTCGCATTACCCACCAGCGGTGGTTCAT...CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR CCA 90 bp GGTGATGTACTCCACGTAAGCGATGGCATCTTCCACACGGCGCTTCTTTGTACACAAGTGGGATGGCCCTaGGTAAGGAAGACAGGCACA +
Preference number: 4 (lower is better)
Translates to: GDVLHVSDGIFHTALLCTQVGWP*VRKTGT
Trigger: TGTGCCTGTCTTCCTTACCCAGGGCCATCCCACTTG...TGTACAAAGAAGCGCCGTGTGGAAGATGCCATCGCTTACGTGGAGTACATCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
3UTR CAA 72 bp TTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATaGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAAC +
Preference number: 4 (lower is better)
Translates to: LHTYLMNSRAGL*SSKWEPGRTGN
Trigger: GTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
3UTR CAA 72 bp TATACGCCCTCGATGTCTGGCGCTGACAGCTCAGCGTaGATCTCGTTGATGTGTTCCTGGTACATGTCCTCT +
Preference number: 4 (lower is better)
Translates to: YTPSMSGADSSA*ISLMCSWYMSS
Trigger: AGAGGACATGTACCAGGAACACATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGGCGTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
3UTR CAA 72 bp GGTGGGTTTGGTCTCCTGGACGTGTTCAAACCACCTTaGGATCAGATGAGCCTCCTTACCTCATCGGGTTCA +
Preference number: 4 (lower is better)
Translates to: GGFGLLDVFKPP*DQMSLLTSSGS
Trigger: TGAACCCGATGAGGTAAGGAGGCTCATCTGATCCAAAGGTGGTTTGAACACGTCCAGGAGACCAAACCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672742.1
3UTR CAA 72 bp TTTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTGCTaGGAAAATGGCAAGTGGGATGGCCACTATGATCCA +
Preference number: 4 (lower is better)
Translates to: FPEKVLPHRGLC*ENGKWDGHYDP
Trigger: TGGATCATAGTGGCCATCCCACTTGCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672002.1
CDS-3UTR TCA 90 bp GCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCCACACAGATAGGCACCTTGGAGAGAAAAGATaGAACTTCTCGCTCACAACC +
Preference number: 4 (lower is better)
Translates to: ALPVQDPIVDLVSHTDRHLGEKR*NFSLTT
Trigger: GGTTGTGAGCGAGAAGTTTCATCTTTTCTCTCCAAG...GTGCCTATCTGTGTGGCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp AACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACCATTTCCTCGGTATCTaGCATTGTACCAATGAGCCA +
Preference number: 4 (lower is better)
Translates to: NSRAGLLSSKWEPGRTGNHFLGI*HCTNEP
Trigger: TGGCTCATTGGTACAATGTCAGATACCGAGGAAATG...GTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCCATAGAAGGAGTTCAGGATGCACTTGTGGGCCAGCTGCAGCGAGTCATACAGAACGGTTCTCAGAGATaGGCTCGAATAGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: AIEGVQDALVGQLQRVIQNGSQR*ARIAQS
Trigger: ACTCTGAGCTATTCGAGCTCATCTCTGAGAACCGTT...CTGTATGACTCGCTGCAGCTGGCCCACAAGTGCATCCTGAACTCCTTCTATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp ACAAGACAGTTGTCATCAGCCTCCTTTCCACCCAGGTCAGGGCGGGCTGTAGGGCATGTCCTCTGGCACTaGATACTCATAGAGATTGTA +
Preference number: 4 (lower is better)
Translates to: TRQLSSASFPPRSGRAVGHVLWH*ILIEIV
Trigger: TACAATCTCTATGAGTATTCAGTGCCAGAGGACATG...CCCTACAGCCCGCCCTGACCTGGGTGGAAAGGAGGCTGATGACAACTGTCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GAAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTGGACTGAACAGCGATaGGTGTGGGCCCCCGGCGCT +
Preference number: 4 (lower is better)
Translates to: EEIPSIERKKLSENGRSPWTEQR*VWAPGA
Trigger: AGCGCCGGGGGCCCACACTCATCGCTGTTCAGTCCA...AGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ACAGATAGGCACCAGTGGGAATTCCTCCAAGACAGGAATTTCACTGGCCAGCCTCCAGGACCCCATAGTTaGTCTTGTCAGCCACACAGA +
Preference number: 4 (lower is better)
Translates to: TDRHQWEFLQDRNFTGQPPGPHS*SCQPHR
Trigger: TCTGTGTGGCTGACAAGATCAACTATGGGGTCCTGG...AGGCTGGCCAGTGAAATTCCTGTCTTGGAGGAATTCCCACTGGTGCCTATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCTGAACTGTTGATCTCAACAGTGGCTTGGTCATCGAACTCCATGACAAGACAGTTGACGGCCAGGTTCTaGAGGTCCAGCTCCACACAC +
Preference number: 4 (lower is better)
Translates to: PELLISTVAWSSNSMTRQLTARF*RSSSTH
Trigger: GTGTGTGGAGCTGGACCTTCAGAACCTGGCCGTCAA...CTGTCTTGTCATGGAGTTCGATGACCAAGCCACTGTTGAGATCAACAGTTCAGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCCCAGCATGAACCACCGCTGGTGGGTAATGCGAGTAGCTGCCCTCAACCATGCTCTTGCAGTCCACAGTaGATACGAGATGAAACTTTT +
Preference number: 4 (lower is better)
Translates to: AQHEPPLVGNASSCPQPCSCSPQ*IRDETF
Trigger: AAAAGTTTCATCTCGTATTCACTGTGGACTGCAAGA...GCATGGTTGAGGGCAGCTACTCGCATTACCCACCAGCGGTGGTTCATGCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR TCA 90 bp GAGCCATTTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTGCTTGGAAAATGGCACGCTGAAACAATCATaGGGAAGTAGTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: EPFPEKVLPHRGLCLENGTLKQS*GSSSGR
Trigger: CCTGCCAGAACTACTTCCTCATGATTGTTTCAGCGT...GCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ACAGATAGGCACCAGTGGGAATTCCTCCAAGACAGGAATTTCACTGGCCAGCCTAATCCTGAGAGAAGGTaGTCATTCCGGGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: TDRHQWEFLQDRNFTGQPNPERR*SFREGL
Trigger: GAGCCCTTCCCGGAATGATCACCTTCTCTCAGGATT...AGGCTGGCCAGTGAAATTCCTGTCTTGGAGGAATTCCCACTGGTGCCTATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGAGTTCCGAGAGCCTGTaGCTTTCTTCTGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVSSESL*LSSESS
Trigger: AGAAGATTCAGAAGAAAGTCACAGGCTCTCGGAACT...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGACAGGAAACATCTCTaGGAGCTCAGTGGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: AHVFDELQGRVIEQQVGTDRKHL*ELSGVP
Trigger: CGGAACTCCACTGAGCTCTCAGAGATGTTTCCTGTC...GGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGTATTCACCTGGTTTGTaGTGTTGGTGTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: AGLLSSKWEPGRTGNISEYSPGL*CWCPGT
Trigger: TGTCCCTGGACACCAACATCACAAACCAGGTGAATA...CTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CCTTACCTCATCGGGTTCATTGAAGACACAAAAGGGGCCTTCATATTCTGGCTTTCCCGCTCCCTCCTGTaGCGTCTGAGCTCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: PYLIGFIEDTKGAFIFWLSRSLL*RLSSLK
Trigger: TTTCAGGGAGCTCAGACGTCACAGGAGGGAGCGGGA...AAGCCAGAATATGAAGGCCCCTTTTGTGTCTTCAATGAACCCGATGAGGTAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS-3UTR GCA 90 bp GCCCACCTCCACGGCCGCCGAGAGCTTCTTTTTCCACACCTTGTGGAGCCCTTTGACAGTCTCCACTTTTaGAATTTTGCCCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: AHLHGRRELLFPHLVEPFDSLHF*NFALKL
Trigger: AAGTTTCAGGGCAAAATTGCAAAAGTGGAGACTGTC...AAAGGGCTCCACAAGGTGTGGAAAAAGAAGCTCTCGGCGGCCGTGGAGGTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCAGCTTATTGAACTCCTaGTCTTGCTTGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VQEATEAWKSIHCVRNGASLLNS*SCLLGK
Trigger: CTTCCCCAACAAGCAAGAGCAGGAGTTCAATAAGCT...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAGGCAAGGGATATCGCTaGGGAAAACCCCAGACTCGA +
Preference number: 4 (lower is better)
Translates to: LAHVFDELQGRVIEQQVGGKGYR*GKPQTR
Trigger: TCGAGTCTGGGGTTTTCCGCAGCGATATCCCTTGCC...TCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CCTGAACTGTTGATCTCAACAGTGGCTTGGTCATCGAACTCCATGACAAGACAGCACTTGTGGGCCAGCTaGAGCGAGTCATACAGCACC +
Preference number: 4 (lower is better)
Translates to: PELLISTVAWSSNSMTRQHLWAS*SESYST
Trigger: GGTGCTGTATGACTCGCTGCAGCTGGCCCACAAGTG...CTGTCTTGTCATGGAGTTCGATGACCAAGCCACTGTTGAGATCAACAGTTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TGTAGACCATGTTGGAGCGAGGAAGGACCCGATTTACCTTGCGATACGAAGCACAGAAGGAGTTCAGGATaGACTTGTGGGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: CRPCWSEEGPDLPCDTKHRRSSG*TCGPAA
Trigger: TGCAGCTGGCCCACAAGTGCATCCTGAACTCCTTCT...GTGCTTCGTATCGCAAGGTAAATCGGGTCCTTCCTCGCTCCAACATGGTCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGCCTCACCGTGGGCTCTaGTTGGAAAATGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: TLHTYLMNSRAGLLSSKWPHRGL*LENGKW
Trigger: CCACTTGCCATTTTCCAAGCAGAGCCCACGGTGAGG...CCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAAACTGGGTTCTTTACCTaGTGCAGGGCCGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: LHTYLMNSRAGLLSSKWETGFFT*CRAAGM
Trigger: CATCCCTGCGGCCCTGCAGCAGGTAAAGAACCCAGT...TTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GGTGATGTACTCCACGTAAGCGATGGCATCTTCCACACGGCGCTTCTTTGTACAGGACCCGATTTACCTTaGGATACGAAGCACCCTCCT +
Preference number: 4 (lower is better)
Translates to: GDVLHVSDGIFHTALLCTGPDLP*DTKHPP
Trigger: AGGAGGGTGCTTCGTATCGCAAGGTAAATCGGGTCC...TGTACAAAGAAGCGCCGTGTGGAAGATGCCATCGCTTACGTGGAGTACATCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCTCCCAGCCTGAAAGGTaGCTCACCAGCTGTTTATTG +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKISQPER*LTSCLL
Trigger: CAATAAACAGCTGGTGAGGCACCTTTCAGGCTGGGA...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ATGAGCCTCCTTACCTCATCGGGTTCATTGAAGACACAAAAGGGGCCTTCATATGGCTGGGCATCTGGTTaGTGCGCACAGTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: MSLLTSSGSLKTQKGPSYGWASG*CAQCPA
Trigger: TGCTGGACACTGTGCGCAGCAACCAGATGCCCAGCC...ATATGAAGGCCCCTTTTGTGTCTTCAATGAACCCGATGAGGTAAGGAGGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS-3UTR GCA 90 bp ATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGACATCACCTGGTTGTCTaGATAGATGTTGTGGTACTG +
Preference number: 4 (lower is better)
Translates to: MNSRAGLLSSKWEPGRTGHHLVV*IDVVVL
Trigger: CAGTACCACAACATCTATGCAGACAACCAGGTGATG...TCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGAGCAACTCAGCGATGAGCTaGAGGAAGAGCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: GLLSSKWEPGRTGNISESNSAMS*RKSFFI
Trigger: GATGAAGAAGCTCTTCCTGCAGCTCATCGCTGAGTT...GCTCTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CAGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAATTCCTGCTCATCCTCTaGTCCCCCTGCTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: QHLAHVFDELQGRVIEQQFLLIL*SPCFLG
Trigger: TCCCAGAAAGCAGGGGGAGCAGAGGATGAGCAGGAA...TTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GGTGATGTACTCCACGTAAGCGATGGCATCTTCCACACGGCGCTTCTTTGTACATCGTCCTCATTTTCCTaGTCATCCTCTGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: GDVLHVSDGIFHTALLCTSSSFS*SSSAPP
Trigger: AGGGGGAGCAGAGGATGAGCAGGAAAATGAGGACGA...TGTACAAAGAAGCGCCGTGTGGAAGATGCCATCGCTTACGTGGAGTACATCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ACAAGACAGTTGTCATCAGCCTCCTTTCCACCCAGGTCAGGGCGGGCTGTAGGGCTGAGTGAGCTCATTTaGGACATAATCCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: TRQLSSASFPPRSGRAVGLSELI*DIILRE
Trigger: TTCTCTCAGGATTATGTCGCAAATGAGCTCACTCAG...CCCTACAGCCCGCCCTGACCTGGGTGGAAAGGAGGCTGATGACAACTGTCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AGGTCGTTCAACAAGGTCATCTCGGCGGGTGATTTCTACCGGAAAAGCATTTCCCCAGGAGGTACGACATaGCGTAGTGCTGGGCAATGT +
Preference number: 4 (lower is better)
Translates to: RSFNKVISAGDFYRKSISPGGTT*RSAGQC
Trigger: ACATTGCCCAGCACTACGGCATGTCGTACCTCCTGG...GGAAATGCTTTTCCGGTAGAAATCACCCGCCGAGATGACCTTGTTGAACGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS-3UTR GCA 90 bp CTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCACGGCATAACCATGTaGATGCACATACATAAACGC +
Preference number: 4 (lower is better)
Translates to: LQGRVIEQQVGTGEDRKHHGITM*MHIHKR
Trigger: GCGTTTATGTATGTGCATGCACATGGTTATGCCGTG...ATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp TCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTATGTATGCACAAACATaGCTACAGGTTCCTCGGGGA +
Preference number: 4 (lower is better)
Translates to: SPTSTRRSRSRFSLFTWFMYAQT*LQVPRG
Trigger: TCCCCGAGGAACCTGTAGGCATGTTTGTGCATACAT...AAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CCTGAACTGTTGATCTCAACAGTGGCTTGGTCATCGAACTCCATGACAAGACAGCGCTCCTCAGAGACATaGAGCCGTTGGCTACCACCT +
Preference number: 4 (lower is better)
Translates to: PELLISTVAWSSNSMTRQRSSET*SRWLPP
Trigger: AGGTGGTAGCCAACGGCTCCATGTCTCTGAGGAGCG...CTGTCTTGTCATGGAGTTCGATGACCAAGCCACTGTTGAGATCAACAGTTCAGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGGCTCACAACCCTTTCTaGTCGCAATGTAGAAATACG +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVAHNPF*SQCRNT
Trigger: CGTATTTCTACATTGCGACCAGAAAGGGTTGTGAGC...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CCA 90 bp CAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCGCAAAGATGAATGGGTaGACGTACTTCATGTACAGG +
Preference number: 4 (lower is better)
Translates to: QGRVIEQQVGTGEDRKHLAKMNG*TYFMYR
Trigger: CCTGTACATGAAGTACGTCCACCCATTCATCTTTGC...GAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp TCGGTTCAGCTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTAAGGAGTTTTCCCGCTaGCAGATGGTGGTGAGACGC +
Preference number: 4 (lower is better)
Translates to: SVQLIHLVCDVGVQGQHLKEFSR*QMVVRR
Trigger: GCGTCTCACCACCATCTGCCAGCGGGAAAACTCCTT...AAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAACCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp TCAAAGCCCTTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCTTCAGGATGCACTTGTaGGCCAGCTGCAGCGAGTCA +
Preference number: 4 (lower is better)
Translates to: SKPLSSAREPSSLNTAYLFRMHL*ASCSES
Trigger: TGACTCGCTGCAGCTGGCCCACAAGTGCATCCTGAA...GAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAAGGGCTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GTTCAGCTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCATTCAGGATGCACTTGTaGGCCAGCTGCAGCGAGTCA +
Preference number: 4 (lower is better)
Translates to: VQLIHLVCDVGVQGQHLAFRMHL*ASCSES
Trigger: TGACTCGCTGCAGCTGGCCCACAAGTGCATCCTGAA...TGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAGATGGTCACTTTaGGCTTCTTCACATTGGTCG +
Preference number: 4 (lower is better)
Translates to: FDELQGRVIEQQVGTGEDRRWSL*ASSHWS
Trigger: CGACCAATGTGAAGAAGCCCAAAGTGACCATCTCCT...GTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CGCAGCACCTCGTCGGGCTCCATGGGAATAATGGTGCACAGAGCAAAGATGAATGTTCAACATGGCGCCTaGGTAGGAGATGGTCACTTT +
Preference number: 4 (lower is better)
Translates to: RSTSSGSMGIMVHRAKMNVQHGA*VGDGHF
Trigger: AAAGTGACCATCTCCTACCCAGGCGCCATGTTGAAC...ATTCATCTTTGCTCTGTGCACCATTATTCCCATGGAGCCCGACGAGGTGCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CAGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGGCTCAGCCAGCTCCTaGTACTGGTCATTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: QHLAHVFDELQGRVIEQQGSASS*YWSLVK
Trigger: CTTCACCAATGACCAGTACCAGGAGCTGGCTGAGCC...TTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCAGGCTGGAAGAATCATaGCAAGGTAGGGCCCATCAA +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKIRLEES*QGRAHQ
Trigger: TTGATGGGCCCTACCTTGCCATGATTCTTCCAGCCT...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACGTCCAGCCAGTAGTCAGCCACCTTGGCTACAGAGCCATACACCTCTTCCAGTTCTTCCTTGGAGGCTaGAAGAATCATGGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: HVQPVVSHLGYRAIHLFQFFLGG*KNHGKV
Trigger: TACCTTGCCATGATTCTTCCAGCCTCCAAGGAAGAA...CTGGAAGAGGTGTATGGCTCTGTAGCCAAGGTGGCTGACTACTGGCTGGACGTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGTCTTGCCTTCTTCCTTaGAGGCTGGAAGAATCATGG +
Preference number: 4 (lower is better)
Translates to: AGLLSSKWEPGRTGNISESCLLP*RLEESW
Trigger: CCATGATTCTTCCAGCCTCCAAGGAAGAAGGCAAGA...CTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CGGTTCTCAGAGATGAGCTCGAATAGCTCAGAGTCAGGCATGTTGGCTGCCTTGAGTAGTCAGCCACCTTaGCTACAGAGCCATACACCT +
Preference number: 4 (lower is better)
Translates to: RFSEMSSNSSESGMLAALSSQPP*LQSHTP
Trigger: AGGTGTATGGCTCTGTAGCCAAGGTGGCTGACTACT...CAAGGCAGCCAACATGCCTGACTCTGAGCTATTCGAGCTCATCTCTGAGAACCG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGCATAGATGTTGTAGTAGTCAGCCACCTTaGCTACAGAGCCATACACCT +
Preference number: 4 (lower is better)
Translates to: ATEASGRSASPGCLHRCCSSQPP*LQSHTP
Trigger: AGGTGTATGGCTCTGTAGCCAAGGTGGCTGACTACT...ACAACATCTATGCAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGATTTGACACGTGGCACTaGGTTCTTTACCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRFDTWH*VLYLLQ
Trigger: CTGCAGCAGGTAAAGAACCCAGTGCCACGTGTCAAA...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTTTTGACACGTGGCACTaGGTTCTTTACCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RFSRVRVWIPGETSPQTAFDTWH*VLYLLQ
Trigger: CTGCAGCAGGTAAAGAACCCAGTGCCACGTGTCAAA...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGGTGTTTGACACGTaGCACTGGGTTCTTTACCTG +
Preference number: 4 (lower is better)
Translates to: HTYLMNSRAGLLSSKWEPGVFDT*HWVLYL
Trigger: CAGGTAAAGAACCCAGTGCCACGTGTCAAACACCCC...CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAAAGTGACAGGGGCTGCTaGGTGAGGCAGCTTTACGAG +
Preference number: 4 (lower is better)
Translates to: LHTYLMNSRAGLLSSKWESDRGC*VRQLYE
Trigger: CTCGTAAAGCTGCCTCACCCAGCAGCCCCTGTCACT...TTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ATGAGCCTCCTTACCTCATCGGGTTCATTGAAGACACAAAAGGGGCCTTCATATCCAAGGCTGGGCATCTaGTTGCTGCGCACAGTGTCC +
Preference number: 4 (lower is better)
Translates to: MSLLTSSGSLKTQKGPSYPRLGI*LLRTVS
Trigger: GGACACTGTGCGCAGCAACCAGATGCCCAGCCTTGG...ATATGAAGGCCCCTTTTGTGTCTTCAATGAACCCGATGAGGTAAGGAGGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS-3UTR CCA 90 bp ATAACCATGTCTACATGTTCCTTGCTGAGTAACACACAGAAGACTCAGGCTGCTACAGGGCGCCAAGGCTaGGCATCTGGTTGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: ITMSTCSLLSNTQKTQAATGRQG*ASGCCA
Trigger: TGCGCAGCAACCAGATGCCCAGCCTTGGCGCCCTGT...AGCAGCCTGAGTCTTCTGTGTGTTACTCAGCAAGGAACATGTAGACATGGTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp ACAGATAGGCACCAGTGGGAATTCCTCCAAGACAGGAATTTCACTGGCCAGCCTAGACAGGAATTTCACTaGCCAGCCTCTTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: TDRHQWEFLQDRNFTGQPRQEFH*PASSAP
Trigger: GGGAGCTGAAGAGGCTGGCCAGTGAAATTCCTGTCT...AGGCTGGCCAGTGAAATTCCTGTCTTGGAGGAATTCCCACTGGTGCCTATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GAGCCATTTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTGCTTGGAAAATGGCCTGGTAGGTTCCCAATaGGAATGTGAAAGTACCTGC +
Preference number: 4 (lower is better)
Translates to: EPFPEKVLPHRGLCLENGLVGSQ*ECESTC
Trigger: GCAGGTACTTTCACATTCCCATTGGGAACCTACCAG...GCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCTTCTTCAATCTGTCTCATCGTAGCTaGCCGGGGCACTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LSSAREPSSLNTAYLFFNLSHRS*PGHWQP
Trigger: AGGCTGCCAGTGCCCCGGCCAGCTACGATGAGACAG...ATTGAAGAAGAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCGTAAATCCTCCACGTTaGATTCCTCCGCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKIVNPPR*IPPPLP
Trigger: AGGAAGAGGCGGAGGAATCCAACGTGGAGGATTTAC...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGGTAAATCCTCCACGTTaGATTCCTCCGCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TYLMNSRAGLLSSKWEPGVNPPR*IPPPLP
Trigger: AGGAAGAGGCGGAGGAATCCAACGTGGAGGATTTAC...CCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGGTAAATCCTCCACGTTaGATTCCTCCGCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: YLMNSRAGLLSSKWEPGRVNPPR*IPPPLP
Trigger: AGGAAGAGGCGGAGGAATCCAACGTGGAGGATTTAC...CCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGTAAATCCTCCACGTTaGATTCCTCCGCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: HVFDELQGRVIEQQVGTGVNPPR*IPPPLP
Trigger: AGGAAGAGGCGGAGGAATCCAACGTGGAGGATTTAC...CCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GTTCAGCTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCACCGTCCTTCATGCAGTaGTACACGGCCACGATGTAC +
Preference number: 4 (lower is better)
Translates to: VQLIHLVCDVGVQGQHLAPSFMQ*YTATMY
Trigger: GTACATCGTGGCCGTGTACCACTGCATGAAGGACGG...TGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGTTATTGAGCAGCAAGTaGGAACCGGGGAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: HTYLMNSRAGLLSSKWEPLLSSK*EPGRTG
Trigger: TCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAA...CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCAGGTGCACCAGGGCCCGGAACAGTAACGGAACCTGAGTCTCATATACGCCCTTTCAGCTTATTCACCTaGTTTGTGATGTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: PGAPGPGTVTEPESHIRPFSLFT*FVMLVS
Trigger: GGACACCAACATCACAAACCAGGTGAATAAGCTGAA...AGGGCGTATATGAGACTCAGGTTCCGTTACTGTTCCGGGCCCTGGTGCACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCACACGTATGTTCCATGAAGACCTaGGTGTGGATGGTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: LIHLVCDVGVQGQHLAHVCSMKT*VWMVRA
Trigger: CGCCCTCACCATCCACACCCAGGTCTTCATGGAACA...TACGTGTGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGTGTTCCATGAAGACCTaGGTGTGGATGGTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: HLAHVFDELQGRVIEQQVCSMKT*VWMVRA
Trigger: CGCCCTCACCATCCACACCCAGGTCTTCATGGAACA...CACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCTTACCTCATCGGGTTCATTGAAGACACAAAAGGGGCCTTCATATTCTGGCTTCAGTGGTCTGGTCACTaGAAGCACGGGGATGTGGCC +
Preference number: 4 (lower is better)
Translates to: PYLIGFIEDTKGAFIFWLQWSGH*KHGDVA
Trigger: GGCCACATCCCCGTGCTTCCAGTGACCAGACCACTG...AAGCCAGAATATGAAGGCCCCTTTTGTGTCTTCAATGAACCCGATGAGGTAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS-3UTR CCA 90 bp TGTAGACCATGTTGGAGCGAGGAAGGACCCGATTTACCTTGCGATACGAAGCACGGCTTTTCCTCCCTCTaGGAGGCAGGACAAAGAACT +
Preference number: 4 (lower is better)
Translates to: CRPCWSEEGPDLPCDTKHGFSSL*EAGQRT
Trigger: AGTTCTTTGTCCTGCCTCCCAGAGGGAGGAAAAGCC...GTGCTTCGTATCGCAAGGTAAATCGGGTCCTTCCTCGCTCCAACATGGTCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ATGGCATCTTCCACACGGCGCTTCTTTGTACAGAGGATGATGCGGTTGAAGTTGTCACGGGTTAGGGTCTaGATTCCTGGGGAAACCAGC +
Preference number: 4 (lower is better)
Translates to: MASSTRRFFVQRMMRLKLSRVRV*IPGETS
Trigger: GCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA...CAACTTCAACCGCATCATCCTCTGTACAAAGAAGCGCCGTGTGGAAGATGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GTTCAGCTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCATCACGGGTTAGGGTCTaGATTCCTGGGGAAACCAGC +
Preference number: 4 (lower is better)
Translates to: VQLIHLVCDVGVQGQHLASRVRV*IPGETS
Trigger: GCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA...TGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCAGCCCATTTCATACTTGTTTaGTGCCCTGTGAAATTGGCC +
Preference number: 4 (lower is better)
Translates to: CEAVGPAHFSMQTGETPAHFILV*CPVKLA
Trigger: GGCCAATTTCACAGGGCACCAAACAAGTATGAAATG...GGCTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGTGTGGAAGGACAGCCTaGTGTAATTTCGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: AGLLSSKWEPGRTGNISECGRTA*CNFASN
Trigger: GTTTGAAGCGAAATTACATCAGGCTGTCCTTCCACA...CTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp TCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTCGAATATCAAAGTCTTaGAGGGAAGAGCTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SPTSTRRSRSRFSLFTWFRISKS*REELLS
Trigger: GCTCAAGAGCTCTTCCCTTCAAGACTTTGATATTCG...AAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGTCACCAGCTGTTTATTaGCCACACACACACAGCCCA +
Preference number: 4 (lower is better)
Translates to: HTYLMNSRAGLLSSKWEPSPAVY*PHTHSP
Trigger: TGGGCTGTGTGTGTGTGGTCAATAAACAGCTGGTGA...CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCGGTCATCGAACTCCATaGCAAGACAGTTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKIGHRTP*QDSCHQ
Trigger: CTGATGACAACTGTCTTGTCATGGAGTTCGATGACC...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGGTCATCGAACTCCATaGCAAGACAGTTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: VFDELQGRVIEQQVGTGEGHRTP*QDSCHQ
Trigger: CTGATGACAACTGTCTTGTCATGGAGTTCGATGACC...CTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TCATATACGCCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGGGTCATCGAACTCCATaGCAAGACAGTTGTCATCAG +
Preference number: 4 (lower is better)
Translates to: SYTPSMSGADSSALISLMGHRTP*QDSCHQ
Trigger: CTGATGACAACTGTCTTGTCATGGAGTTCGATGACC...CATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGGCGTATATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGAACAGCCTGAACTGTTaGTCTCAACAGTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: HVFDELQGRVIEQQVGTGNSLNC*SQQWLG
Trigger: ACCAAGCCACTGTTGAGATCAACAGTTCAGGCTGTT...CCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TGCAGGGTGAAGGCCATCAGCTTCTTCTGTAGAACTTCCACCAGCGTCATCTCGATGTCGTTGACATGGTaGGACTGGAGAATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: CRVKAISFFCRTSTSVISMSLTW*DWRMVL
Trigger: CAACACCATTCTCCAGTCTCACCATGTCAACGACAT...CGAGATGACGCTGGTGGAAGTTCTACAGAAGAAGCTGATGGCCTTCACCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAATGTTGTGGTACTGGGTaGTCTCCTTCACCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LHTYLMNSRAGLLSSKWECCGTG*SPSPSP
Trigger: TGGGCTGGGTGAAGGAGATCACCCAGTACCACAACA...TTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ACACAGGTCCAGGTCGCGGCAGAAGTTACAGCTGCGGCAGATGACCTCAGGAAGTCTTGCAGTCCACAGTaGATACGAGATGAAACTTTT +
Preference number: 4 (lower is better)
Translates to: TQVQVAAEVTAAADDLRKSCSPQ*IRDETF
Trigger: AAAAGTTTCATCTCGTATTCACTGTGGACTGCAAGA...CTTCCTGAGGTCATCTGCCGCAGCTGTAACTTCTGCCGCGACCTGGACCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCTCTTGCAGTCCACAGTaGATACGAGATGAAACTTTT +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLSCSPQ*IRDETF
Trigger: AAAAGTTTCATCTCGTATTCACTGTGGACTGCAAGA...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGATGGTGAAGAAGCTCTaGGTGAGCTCATTTGCGACA +
Preference number: 4 (lower is better)
Translates to: TYLMNSRAGLLSSKWEPGMVKKL*VSSFAT
Trigger: TGTCGCAAATGAGCTCACTCAGAGCTTCTTCACCAT...CCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTAGTTCCGAGAGCCTGTaGCTTTCTTCTGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: SPTSTRRSRSRFSLFTWFSSESL*LSSESS
Trigger: AGAAGATTCAGAAGAAAGTCACAGGCTCTCGGAACT...AAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGTATTCACCTGGTTTGTaGTGTTGGTGTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: VFDELQGRVIEQQVGTGEYSPGL*CWCPGT
Trigger: TGTCCCTGGACACCAACATCACAAACCAGGTGAATA...CTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GTTCAGCTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCAGACCGCCCCATCCTCTaGGAAGGAAGAGTCTTTACA +
Preference number: 4 (lower is better)
Translates to: VQLIHLVCDVGVQGQHLADRPIL*EGRVFT
Trigger: TGTAAAGACTCTTCCTTCTCAGAGGATGGGGCGGTC...TGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCTGACACCTAAGTGCTaGTGCCTCACACATCATACT +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKILTPKC*CLTHHT
Trigger: AGTATGATGTGTGAGGCATCAGCACTTAGGTGTCAG...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR TCA 90 bp AAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTAAGGAGACCTCTCCGTaGCAGGGGAGCCCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: KKFPASRERNCQRMEGLLKETSP*QGSPRA
Trigger: AGCCCGAGGGCTCCCCTGTCACGGAGAGGTCTCCTT...AAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTGACAGTCTCCACTTTTaGAATTTTGCCCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: ATEAWKSIHCVRNGAQGTDSLHF*NFALKL
Trigger: AAGTTTCAGGGCAAAATTGCAAAAGTGGAGACTGTC...AGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACCGTCTCAATGTCAAATaGCAAAACCACAGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNRLNVK*QNHRVR
Trigger: CCTGACCCTGTGGTTTTGGCATTTGACATTGAGACG...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp ACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGAGAAGGAGTTCAGGATaGACTTGTGGGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TLHTYLMNSRAGLLSSKWRRSSG*TCGPAA
Trigger: TGCAGCTGGCCCACAAGTGCATCCTGAACTCCTTCT...CCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GATCCCGAAGAGCGCTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGGTCCCAATCCAGAATTaGTCGAATATCAAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: DPEERFVGLCVVVQVDMAVPIQN*SNIKVL
Trigger: CAAGACTTTGATATTCGAGCAATTCTGGATTGGGAC...CGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAGCGCTCTTCGGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TCTCTGACTCCAGCTGGTGCTGGATCCGATGGTATTCGCTGCGACTGGCTGGCAGTCCCAATCCAGAATTaGTCGAATATCAAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: SLTPAGAGSDGIRCDWLAVPIQN*SNIKVL
Trigger: CAAGACTTTGATATTCGAGCAATTCTGGATTGGGAC...TGCCAGCCAGTCGCAGCGAATACCATCGGATCCAGCACCAGCTGGAGTCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGTCCCAGCCTGAAAGGTaGCTCACCAGCTGTTTATTG +
Preference number: 4 (lower is better)
Translates to: HTYLMNSRAGLLSSKWEPSQPER*LTSCLL
Trigger: CAATAAACAGCTGGTGAGGCACCTTTCAGGCTGGGA...CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ACAGATAGGCACCAGTGGGAATTCCTCCAAGACAGGAATTTCACTGGCCAGCCTGAATGTGAAAGTACCTaGTCATCTCGAAGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: TDRHQWEFLQDRNFTGQPECEST*SSRRPA
Trigger: CGCAGGCCTTCGAGATGAGCAGGTACTTTCACATTC...AGGCTGGCCAGTGAAATTCCTGTCTTGGAGGAATTCCCACTGGTGCCTATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAATTCCTGCTCATCCTCTaGTCCCCCTGCTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LHTYLMNSRAGLLSSKWEFLLIL*SPCFLG
Trigger: TCCCAGAAAGCAGGGGGAGCAGAGGATGAGCAGGAA...TTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GCAGAGAGGATGGCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGGCCTGTGGCAAAAACTaGAAAATGTTCCAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: AERMATEASGRSASPGCLACGKN*KMFQLF
Trigger: AAACAACTGGAACATTTTGCAGTTTTTGCCACAGGC...CAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGCCATCCTCTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CAGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTTCTGGCAGGAGGCTaGCTGTGGCAAAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: QHLAHVFDELQGRVIEQQVLAGG*LWQKLQ
Trigger: TTGCAGTTTTTGCCACAGGCAGCCTCCTGCCAGAAC...TTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ACAGGAAACATCTCTGAGAGCTCAGTGGAGTTCCGAGAGCCTGTGACTTTCTTCTGGAAAAGCATTCACTaGGTGAGAAACGGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: TGNISESSVEFREPVTFFWKSIH*VRNGAQ
Trigger: CTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCA...GAAGAAAGTCACAGGCTCTCGGAACTCCACTGAGCTCTCAGAGATGTTTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCTCCACGTTGGATTCCTCCGCCTCTTCCTCCTCCTCCCCATCTCTTTCCTCCTTTCATACTTGTTTGGTaGCCTGTGAAATTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: PPRWIPPPLPPPPHLFPPFILVW*PVKLAF
Trigger: AAAGGCCAATTTCACAGGGCACCAAACAAGTATGAA...AGGAGGAAAGAGATGGGGAGGAGGAGGAAGAGGCGGAGGAATCCAACGTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGTTCATACTTGTTTGGTaGCCTGTGAAATTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: DELQGRVIEQQVGTGEDRFILVW*PVKLAF
Trigger: AAAGGCCAATTTCACAGGGCACCAAACAAGTATGAA...CCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TCTCTGACTCCAGCTGGTGCTGGATCCGATGGTATTCGCTGCGACTGGCTGGCAATCTGTGGTGAATACTaGAAACATAAGGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: SLTPAGAGSDGIRCDWLAICGEY*KHKETS
Trigger: AGAGGTCTCCTTATGTTTGCAGTATTCACCACAGAT...TGCCAGCCAGTCGCAGCGAATACCATCGGATCCAGCACCAGCTGGAGTCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp TTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGCATACAGGCAAACGTaGACGTTCATAACCATGTCT +
Preference number: 4 (lower is better)
Translates to: LMNSRAGLLSSKWEPGRTAYRQT*TFITMS
Trigger: AGACATGGTTATGAACGTGCACGTTTGCCTGTATGC...TGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGGATACTCCCTGGTTCTGCGTGCATATGTATaGACAAACATGCCTACAGGT +
Preference number: 4 (lower is better)
Translates to: LCGPVRGGTGRYGGYSLVLRAYV*TNMPTG
Trigger: ACCTGTAGGCATGTTTGTGCATACATATGCACGCAG...AACCAGGGAGTATCCGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp TCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGCTCACAACCCTTTCTaGTCGCAATGTAGAAATACG +
Preference number: 4 (lower is better)
Translates to: SPTSTRRSRSRFSLFTWFAHNPF*SQCRNT
Trigger: CGTATTTCTACATTGCGACCAGAAAGGGTTGTGAGC...AAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp ACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGTCCAGATCCTCTTTaGGGACAGTCTCCACTTTTG +
Preference number: 4 (lower is better)
Translates to: TYLMNSRAGLLSSKWEPGSPDPL*GQSPLL
Trigger: CAAAAGTGGAGACTGTCCCCAAAGAGGATCTGGACT...CCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCTGTACAGGTAGTAAGTaGCGACAGCATCTGACACAG +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKICTGSK*RQHLTQ
Trigger: CTGTGTCAGATGCTGTCGCCACTTACTACCTGTACA...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CCA 90 bp CACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGAAGATGATGTTGGCGTaGAAGGCCTGCACCATCAGC +
Preference number: 4 (lower is better)
Translates to: HLAHVFDELQGRVIEQQVKMMLA*KACTIS
Trigger: GCTGATGGTGCAGGCCTTCCACGCCAACATCATCTT...CACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp AGGCTTTCCGGCAGTAATCCGCCAGCCTTCTCTTCTCGTATTTCGCCTGTTCCTAGGAGATGGTCACTTTaGGCTTCTTCACATTGGTCG +
Preference number: 4 (lower is better)
Translates to: RLSGSNPPAFSSRISPVPRRWSL*ASSHWS
Trigger: CGACCAATGTGAAGAAGCCCAAAGTGACCATCTCCT...AGGAACAGGCGAAATACGAGAAGAGAAGGCTGGCGGATTACTGCCGGAAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp ATGGCATCTTCCACACGGCGCTTCTTTGTACAGAGGATGATGCGGTTGAAGTTGCGCCTGGGTAGGAGATaGTCACTTTGGGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: MASSTRRFFVQRMMRLKLRLGRR*SLWASS
Trigger: TGAAGAAGCCCAAAGTGACCATCTCCTACCCAGGCG...CAACTTCAACCGCATCATCCTCTGTACAAAGAAGCGCCGTGTGGAAGATGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACATTCTTCCTTGGAGGCTaGAAGAATCATGGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: LMNSRAGLLSSKWEPGRTFFLGG*KNHGKV
Trigger: TACCTTGCCATGATTCTTCCAGCCTCCAAGGAAGAA...TGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ATGGCATCTTCCACACGGCGCTTCTTTGTACAGAGGATGATGCGGTTGAAGTTGCAGAGTCAGGCATGTTaGCTGCCTTGCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: MASSTRRFFVQRMMRLKLQSQAC*LPCCTA
Trigger: TGCTGTACAGCAAGGCAGCCAACATGCCTGACTCTG...CAACTTCAACCGCATCATCCTCTGTACAAAGAAGCGCCGTGTGGAAGATGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCTTCTTCAATCCGAAGAGCGCTTTGTaGGCCTGTGCGTGGTGGTAC +
Preference number: 4 (lower is better)
Translates to: LSSAREPSSLNTAYLFFNPKSAL*ACAWWY
Trigger: GTACCACCACGCACAGGCCCACAAAGCGCTCTTCGG...ATTGAAGAAGAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp TTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAAGGTCTCCTTTGAATaGATGCTGCTGGTGATGTAC +
Preference number: 4 (lower is better)
Translates to: FDELQGRVIEQQVGTGEDKVSFE*MLLVMY
Trigger: GTACATCACCAGCAGCATCCATTCAAAGGAGACCTT...GTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CAGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAATTATTGAGCAGCAAGTaGGAACCGGGGAGGACAGGA +
Preference number: 4 (lower is better)
Translates to: QHLAHVFDELQGRVIEQQLLSSK*EPGRTG
Trigger: TCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAA...TTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AGGTGCTCAAGAGCAAAGGTCTCTGCTTCCCAGCCTGAAAGGTGCCTCACCAGCTTCAGCTTATTCACCTaGTTTGTGATGTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: RCSRAKVSASQPERCLTSFSLFT*FVMLVS
Trigger: GGACACCAACATCACAAACCAGGTGAATAAGCTGAA...GCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAGACCTTTGCTCTTGAGCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCACACGTATTTGGACAGTCAGGGTaGTCAGTGGTCTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: LIHLVCDVGVQGQHLAHVFGQSG*SVVWSL
Trigger: CAGTGACCAGACCACTGACCACCCTGACTGTCCAAA...TACGTGTGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATTTCATACTTGTTTaGTGCCCTGTGAAATTGGCC +
Preference number: 4 (lower is better)
Translates to: ELQGRVIEQQVGTGEDRKHFILV*CPVKLA
Trigger: GGCCAATTTCACAGGGCACCAAACAAGTATGAAATG...TTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
3UTR CAA 72 bp GGTGGGTTTGGTCTCCTGGACGTGTTCAAACCACCTTaGGATCAGATGAGCCTCATCGGGTTCATTGAAGAC +
Preference number: 4 (lower is better)
Translates to: GGFGLLDVFKPP*DQMSLIGFIED
Trigger: GTCTTCAATGAACCCGATGAGGCTCATCTGATCCAAAGGTGGTTTGAACACGTCCAGGAGACCAAACCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537064.5
3UTR CAA 72 bp TCGATGCGGCTGGGAACGTCCTTCAGGGAGGCAAGCTaGCTCTTAATCTCATCACACACCTCTTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: SMRLGTSFREAS*LLISSHTSSKL
Trigger: CAACTTTGAAGAGGTGTGTGATGAGATTAAGAGCAAGCTTGCCTCCCTGAAGGACGTTCCCAGCCGCATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCTTTGCAATTTTGCCCTaGAACTTCTTGGAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: APVRLWGQPISPCKQVRLFAILP*NFLERK
Trigger: TTTTCTCTCCAAGAAGTTTCAGGGCAAAATTGCAAA...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp GCAGAGAGGATGGCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGTTTGCAATTTTGCCCTaGAACTTCTTGGAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: AERMATEASGRSASPGCLFAILP*NFLERK
Trigger: TTTTCTCTCCAAGAAGTTTCAGGGCAAAATTGCAAA...CAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGCCATCCTCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGATTCTGGCTTGGGGGTaGACTCAAAATCTTCAATAT +
Preference number: 4 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVILAWG*TQNLQY
Trigger: ATATTGAAGATTTTGAGTTCACCCCCAAGCCAGAAT...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCGAATATCAAAGTCTTaGAGGGAAGAGCTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: RFSRVRVWIPGETSPQTARISKS*REELLS
Trigger: GCTCAAGAGCTCTTCCCTTCAAGACTTTGATATTCG...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGCATGTCCTCTGGCACTaGATACTCATAGAGATTGTA +
Preference number: 4 (lower is better)
Translates to: AGLLSSKWEPGRTGNISEHVLWH*ILIEIV
Trigger: TACAATCTCTATGAGTATTCAGTGCCAGAGGACATG...CTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGAACAGTAACGGAACCTaGGTCTCATATACGCCCTCG +
Preference number: 4 (lower is better)
Translates to: TLHTYLMNSRAGLLSSKWNSNGT*VSYTPS
Trigger: CGAGGGCGTATATGAGACTCAGGTTCCGTTACTGTT...CCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GGTGATGTACTCCACGTAAGCGATGGCATCTTCCACACGGCGCTTCTTTGTACAAACAGCCTGAACTGTTaGTCTCAACAGTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: GDVLHVSDGIFHTALLCTNSLNC*SQQWLG
Trigger: ACCAAGCCACTGTTGAGATCAACAGTTCAGGCTGTT...TGTACAAAGAAGCGCCGTGTGGAAGATGCCATCGCTTACGTGGAGTACATCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGAATGGATGCTGCTGGTaGTGTACTCCACGTAAGCGA +
Preference number: 4 (lower is better)
Translates to: STLHTYLMNSRAGLLSSKNGCCW*CTPRKR
Trigger: TCGCTTACGTGGAGTACATCACCAGCAGCATCCATT...CTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GGTGATGTACTCCACGTAAGCGATGGCATCTTCCACACGGCGCTTCTTTGTACAATGGAAGGTCTCCTTTaGATGGATGCTGCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: GDVLHVSDGIFHTALLCTMEGLL*MDAAGD
Trigger: ATCACCAGCAGCATCCATTCAAAGGAGACCTTCCAT...TGTACAAAGAAGCGCCGTGTGGAAGATGCCATCGCTTACGTGGAGTACATCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ACAGTAACGGAACCTGAGTCTCATATACGCCCTCGATGTCTGGCGCTGACAGCTAGTTCCGAGAGCCTGTaGCTTTCTTCTGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: TVTEPESHIRPRCLALTASSESL*LSSESS
Trigger: AGAAGATTCAGAAGAAAGTCACAGGCTCTCGGAACT...AGCTGTCAGCGCCAGACATCGAGGGCGTATATGAGACTCAGGTTCCGTTACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTGGGTGTCTGCATTTCTaGTTTACATTTCATACTTGT +
Preference number: 4 (lower is better)
Translates to: ATEAWKSIHCVRNGAQGTGCLHF*FTFHTC
Trigger: ACAAGTATGAAATGTAAATCAGAAATGCAGACACCC...AGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GTAGAACACACGGGGGATGCTCAGCCTGATGCAGTGCAAGTCACTGCCAACGAGATCTTCAATATCTTCTaGAACAATCTCCCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: VEHTGDAQPDAVQVTANEIFNIF*NNLPGH
Trigger: ATGGCCAGGGAGATTGTTTCAGAAGATATTGAAGAT...CTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAGCATCCCCCGTGTGTTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537064.5
CDS-3UTR GCA 90 bp TCGGTTCAGCTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTCTTCCGCTGGCAGTTTaGTCCAGGCTTATTGAAGTC +
Preference number: 4 (lower is better)
Translates to: SVQLIHLVCDVGVQGQHLLPLAV*SRLIEV
Trigger: GACTTCAATAAGCCTGGAGCAAACTGCCAGCGGAAG...AAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp TTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAAAGAAGGAGTTCAGGATaGACTTGTGGGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LHTYLMNSRAGLLSSKWERRSSG*TCGPAA
Trigger: TGCAGCTGGCCCACAAGTGCATCCTGAACTCCTTCT...TTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCACACGTAGAATGTGAAAGTACCTaGTCATCTCGAAGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: LIHLVCDVGVQGQHLAHVECEST*SSRRPA
Trigger: CGCAGGCCTTCGAGATGAGCAGGTACTTTCACATTC...TACGTGTGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACCATCACCTGGTTGTCTaGATAGATGTTGTGGTACTG +
Preference number: 4 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNHHLVV*IDVVVL
Trigger: CAGTACCACAACATCTATGCAGACAACCAGGTGATG...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGCATCACCTGGTTGTCTaGATAGATGTTGTGGTACTG +
Preference number: 4 (lower is better)
Translates to: VFDELQGRVIEQQVGTGEHHLVV*IDVVVL
Trigger: CAGTACCACAACATCTATGCAGACAACCAGGTGATG...CTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCGCCTGTGGCAAAAACTaGAAAATGTTCCAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: VQEATEAWKSIHCVRNGAACGKN*KMFQLF
Trigger: AAACAACTGGAACATTTTGCAGTTTTTGCCACAGGC...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAGCCTGTGGCAAAAACTaGAAAATGTTCCAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: MNSRAGLLSSKWEPGRTGACGKN*KMFQLF
Trigger: AAACAACTGGAACATTTTGCAGTTTTTGCCACAGGC...TCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp AACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACGCCTGTGGCAAAAACTaGAAAATGTTCCAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: NSRAGLLSSKWEPGRTGNACGKN*KMFQLF
Trigger: AAACAACTGGAACATTTTGCAGTTTTTGCCACAGGC...GTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAAGTGAAGGACAAGGGCTaGAGTGAGCCAAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LHTYLMNSRAGLLSSKWEVKDKG*SEPKVR
Trigger: CCTCACTTTTGGCTCACTGCAGCCCTTGTCCTTCAC...TTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGTGGTACAGGCAAACACGTaGATGTTCGTAACTATGTCT +
Preference number: 4 (lower is better)
Translates to: PTSTRRSRSRFSLFTWFVVQANT*MFVTMS
Trigger: AGACATAGTTACGAACATGCACGTGTTTGCCTGTAC...CACAAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp AGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGCTGAGTGAGCTCATTTaGGACATAATCCGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: STLHTYLMNSRAGLLSSKLSELI*DIIREG
Trigger: CCCTTCCCGGATTATGTCGCAAATGAGCTCACTCAG...CTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544870.5
CDS-3UTR CCA 90 bp ATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAACAATGTTGTCCAACTaGTCAGCTATCTTCTTAGAG +
Preference number: 4 (lower is better)
Translates to: MNSRAGLLSSKWEPGRTGTMLSN*SAIFLE
Trigger: CTCTAAGAAGATAGCTGACCAGTTGGACAACATTGT...TCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp AGGTGCTCAAGAGCAAAGGTCTCTGCTTCCCAGCCTGAAAGGTGCCTCACCAGCGAAATCATCATAATCTaGTCTGTCTCAGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: RCSRAKVSASQPERCLTSEIIII*SVSASG
Trigger: TCCTGATGCTGAGACAGACCAGATTATGATGATTTC...GCTGGTGAGGCACCTTTCAGGCTGGGAAGCAGAGACCTTTGCTCTTGAGCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp AGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGGGGGCCTTCATATTCTaGCTTGGGGGTGAACTCAAA +
Preference number: 4 (lower is better)
Translates to: STLHTYLMNSRAGLLSSKGAFIF*LGGELK
Trigger: TTTGAGTTCACCCCCAAGCCAGAATATGAAGGCCCC...CTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp GTTCAGCTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCAGGATGGCTCTGCAGATaGTCTTCAGGTCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: VQLIHLVCDVGVQGQHLAGWLCR*SSGQFL
Trigger: CAGAAACTGACCTGAAGACCATCTGCAGAGCCATCC...TGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACAGGAAACATCTCTGAGAGCTCAGTGGAGTTCCGAGAGCCTGTGACTTTCTTCGGATGGCTCTGCAGATaGTCTTCAGGTCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: TGNISESSVEFREPVTFFGWLCR*SSGQFL
Trigger: CAGAAACTGACCTGAAGACCATCTGCAGAGCCATCC...GAAGAAAGTCACAGGCTCTCGGAACTCCACTGAGCTCTCAGAGATGTTTCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGCTGGTAGGTTCCCAATaGGAATGTGAAAGTACCTGC +
Preference number: 4 (lower is better)
Translates to: HTYLMNSRAGLLSSKWEPLVGSQ*ECESTC
Trigger: GCAGGTACTTTCACATTCCCATTGGGAACCTACCAG...CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGCTCCACACACACTGTaGAGTAACAGCCTGAACTGT +
Preference number: 4 (lower is better)
Translates to: TLHTYLMNSRAGLLSSKWAPHTL*SNSLNC
Trigger: ACAGTTCAGGCTGTTACTCCACAGTGTGTGTGGAGC...CCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCTTGTAGGCGAGCAGGAATCGCTGGATGGCTCTGCAGATGGTCTTCAGGTCAGGAAATTGTCAGAGAATaGAAGGTCTCCTTTGAATGG +
Preference number: 4 (lower is better)
Translates to: PCRRAGIAGWLCRWSSGQEIVRE*KVSFEW
Trigger: CCATTCAAAGGAGACCTTCCATTCTCTGACAATTTC...CTGACCTGAAGACCATCTGCAGAGCCATCCAGCGATTCCTGCTCGCCTACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCGATACGAAGCACCCTCCTCCGCTTTAGCGACTCGCTGGTTCACGTAGAACACGAAATTGTCAGAGAATaGAAGGTCTCCTTTGAATGG +
Preference number: 4 (lower is better)
Translates to: AIRSTLLRFSDSLVHVEHEIVRE*KVSFEW
Trigger: CCATTCAAAGGAGACCTTCCATTCTCTGACAATTTC...GTGTTCTACGTGAACCAGCGAGTCGCTAAAGCGGAGGAGGGTGCTTCGTATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGAGCTCCGCCATAGTTAGATaGATCCATCCAGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: GLLSSKWEPGRTGNISESSAIVR*IHPEKK
Trigger: TTTCTTCTCTGGATGGATCCATCTAACTATGGCGGA...GCTCTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGTCCGCCATAGTTAGATaGATCCATCCAGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: AGLLSSKWEPGRTGNISESAIVR*IHPEKK
Trigger: TTTCTTCTCTGGATGGATCCATCTAACTATGGCGGA...CTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGTAAATCCTCCACGTTaGATTCCTCCGCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: HLAHVFDELQGRVIEQQVVNPPR*IPPPLP
Trigger: AGGAAGAGGCGGAGGAATCCAACGTGGAGGATTTAC...CACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTACGGGGATGTGGCCTTaGCATCAGGAGGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: KKFPASRERNCQRMEGLLTGMWP*HQEAWH
Trigger: GTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT...AAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGCCTCAGACAGTAGATaGCAGGGACAAACTAAGGCT +
Preference number: 4 (lower is better)
Translates to: HLAHVFDELQGRVIEQQVASDSR*QGQTKA
Trigger: AGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGC...CACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGTTGGAAAATGGCAAGTaGGATGGCCACTATGATCCA +
Preference number: 4 (lower is better)
Translates to: HVFDELQGRVIEQQVGTGLENGK*DGHYDP
Trigger: TGGATCATAGTGGCCATCCCACTTGCCATTTTCCAA...CCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672002.1
3UTR CAA 72 bp TGGTCTGTCTCAGCATCAGGAAACTTGAGGGGCAGTTaGGTCGTCTCAATGTCAAATGCCAAAACCACAGGG +
Preference number: 4 (lower is better)
Translates to: WSVSASGNLRGS*VVSMSNAKTTG
Trigger: CCCTGTGGTTTTGGCATTTGACATTGAGACGACCAAACTGCCCCTCAAGTTTCCTGATGCTGAGACAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS-3UTR TCA 90 bp AGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTTCAAACCCACCAAGTaGTTTGGCAAGTCCAGATCC +
Preference number: 4 (lower is better)
Translates to: STLHTYLMNSRAGLLSSKFKPTK*FGKSRS
Trigger: GGATCTGGACTTGCCAAATCACTTGGTGGGTTTGAA...CTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp ATAACCATGTCTACATGTTCCTTGCTGAGTAACACACAGAAGACTCAGGCTGCTAGTGGCGACAGCATCTaGCACAGAATACGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: ITMSTCSLLSNTQKTQAASGDSI*HRIRGQ
Trigger: CTGGCCACGTATTCTGTGTCAGATGCTGTCGCCACT...AGCAGCCTGAGTCTTCTGTGTGTTACTCAGCAAGGAACATGTAGACATGGTTAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp CACTGGGTTCTTTACCTGCTGCAGGGCCGCAGGGATGGTGATGATCTTCTGGATTCACATTGGTCGTCTTaGAGACAAAATTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: HWVLYLLQGRRDGDDLLDSHWSS*RQNFLG
Trigger: TCCCAGAAAATTTTGTCTTCAAGACGACCAATGTGA...ATCCAGAAGATCATCACCATCCCTGCGGCCCTGCAGCAGGTAAAGAACCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGCGAATATCAAAGTCTTaGAGGGAAGAGCTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: HTYLMNSRAGLLSSKWEPRISKS*REELLS
Trigger: GCTCAAGAGCTCTTCCCTTCAAGACTTTGATATTCG...CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCATGTCCTCTGGCACTaGATACTCATAGAGATTGTA +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKIHVLWH*ILIEIV
Trigger: TACAATCTCTATGAGTATTCAGTGCCAGAGGACATG...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAAAACAGTAACGGAACCTaGGTCTCATATACGCCCTCG +
Preference number: 4 (lower is better)
Translates to: LHTYLMNSRAGLLSSKWENSNGT*VSYTPS
Trigger: CGAGGGCGTATATGAGACTCAGGTTCCGTTACTGTT...TTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TCGGTTCAGCTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTATGGAAGGTCTCCTTTaGATGGATGCTGCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: SVQLIHLVCDVGVQGQHLMEGLL*MDAAGD
Trigger: ATCACCAGCAGCATCCATTCAAAGGAGACCTTCCAT...AAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAACCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGTCTTGCAGTCCACAGTaGATACGAGATGAAACTTTT +
Preference number: 4 (lower is better)
Translates to: AGLLSSKWEPGRTGNISESCSPQ*IRDETF
Trigger: AAAAGTTTCATCTCGTATTCACTGTGGACTGCAAGA...CTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGACGCTGAAACAATCATaGGGAAGTAGTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: STLHTYLMNSRAGLLSSKTLKQS*GSSSGR
Trigger: CCTGCCAGAACTACTTCCTCATGATTGTTTCAGCGT...CTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCACACGTAATGGTGAAGAAGCTCTaGGTGAGCTCATTTGCGACA +
Preference number: 4 (lower is better)
Translates to: LIHLVCDVGVQGQHLAHVMVKKL*VSSFAT
Trigger: TGTCGCAAATGAGCTCACTCAGAGCTTCTTCACCAT...TACGTGTGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGCATAGATGTTGTTTGTTTGGTGCCCTGTaGAATTGGCCTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: ATEASGRSASPGCLHRCCLFGAL*NWPFFF
Trigger: AAAGAAGAAAGGCCAATTTCACAGGGCACCAAACAA...ACAACATCTATGCAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TTTCCTGAGGCTGATAGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCCCACTTTTGCAATTTTaGCCTGAAACTTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: FPEADRGFPLDPAPNKQGPLLQF*PETSWR
Trigger: TCTCCAAGAAGTTTCAGGGCAAAATTGCAAAAGTGG...GCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCTATCAGCCTCAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR GCA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACTCTTCTTCAATTTCTTaGCTTCTTCCTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNSSSIS*LLPWRL
Trigger: CAGCCTCCAAGGAAGAAGGCAAGAAATTGAAGAAGA...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAAAAGATCTTAATCAGCTaGAGTTCCCCGCGGCGTTTG +
Preference number: 4 (lower is better)
Translates to: LHTYLMNSRAGLLSSKWEKILIS*SSPRRL
Trigger: CAAACGCCGCGGGGAACTGCAGCTGATTAAGATCTT...TTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CACTGGGTTCTTTACCTGCTGCAGGGCCGCAGGGATGGTGATGATCTTCTGGATGTCCCAATCCAGAATTaGTCGAATATCAAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: HWVLYLLQGRRDGDDLLDVPIQN*SNIKVL
Trigger: CAAGACTTTGATATTCGAGCAATTCTGGATTGGGAC...ATCCAGAAGATCATCACCATCCCTGCGGCCCTGCAGCAGGTAAAGAACCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCTTCTTCAATGAAGGTCCAGGATGCTaGGGGCAGTTCTTCGCAAGA +
Preference number: 4 (lower is better)
Translates to: LSSAREPSSLNTAYLFFNEGPGC*GQFFAR
Trigger: TCTTGCGAAGAACTGCCCGCAGCATCCTGGACCTTC...ATTGAAGAAGAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGACTGAGTGAGCTCATTTaGGACATAATCCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRLSELI*DIILRE
Trigger: TTCTCTCAGGATTATGTCGCAAATGAGCTCACTCAG...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CTCGTCGGGCTCCATGGGAATAATGGTGCACAGAGCAAAGATGAATGGGTGGACCTGAGTGAGCTCATTTaGGACATAATCCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LVGLHGNNGAQSKDEWVDLSELI*DIILRE
Trigger: TTCTCTCAGGATTATGTCGCAAATGAGCTCACTCAG...GTCCACCCATTCATCTTTGCTCTGTGCACCATTATTCCCATGGAGCCCGACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CGGTTCTCAGAGATGAGCTCGAATAGCTCAGAGTCAGGCATGTTGGCTGCCTTGCTGAGTGAGCTCATTTaGGACATAATCCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: RFSEMSSNSSESGMLAALLSELI*DIILRE
Trigger: TTCTCTCAGGATTATGTCGCAAATGAGCTCACTCAG...CAAGGCAGCCAACATGCCTGACTCTGAGCTATTCGAGCTCATCTCTGAGAACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp AGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGTACAGGTAGTAAGTaGCGACAGCATCTGACACAG +
Preference number: 4 (lower is better)
Translates to: STLHTYLMNSRAGLLSSKCTGSK*RQHLTQ
Trigger: CTGTGTCAGATGCTGTCGCCACTTACTACCTGTACA...CTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CGCAGCACCTCGTCGGGCTCCATGGGAATAATGGTGCACAGAGCAAAGATGAATCAGAGCAAAGATGAATaGGTGGACGTACTTCATGTA +
Preference number: 4 (lower is better)
Translates to: RSTSSGSMGIMVHRAKMNQSKDE*VDVLHV
Trigger: TACATGAAGTACGTCCACCCATTCATCTTTGCTCTG...ATTCATCTTTGCTCTGTGCACCATTATTCCCATGGAGCCCGACGAGGTGCTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCACACGTATCTTGCCTTCTTCCTTaGAGGCTGGAAGAATCATGG +
Preference number: 4 (lower is better)
Translates to: LIHLVCDVGVQGQHLAHVSCLLP*RLEESW
Trigger: CCATGATTCTTCCAGCCTCCAAGGAAGAAGGCAAGA...TACGTGTGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGCTGGTAGGTTCCCAATaGGAATGTGAAAGTACCTGC +
Preference number: 4 (lower is better)
Translates to: TLHTYLMNSRAGLLSSKWLVGSQ*ECESTC
Trigger: GCAGGTACTTTCACATTCCCATTGGGAACCTACCAG...CCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGATCCGCCATAGTTAGATaGATCCATCCAGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRSAIVR*IHPEKK
Trigger: TTTCTTCTCTGGATGGATCCATCTAACTATGGCGGA...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGCATAGATGTTGTTCCGCCATAGTTAGATaGATCCATCCAGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: ATEASGRSASPGCLHRCCSAIVR*IHPEKK
Trigger: TTTCTTCTCTGGATGGATCCATCTAACTATGGCGGA...ACAACATCTATGCAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGTCCGCCATAGTTAGATaGATCCATCCAGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: HVFDELQGRVIEQQVGTGSAIVR*IHPEKK
Trigger: TTTCTTCTCTGGATGGATCCATCTAACTATGGCGGA...CCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGTTCAGCTTATTCACCTaGTTTGTGATGTTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: HVFDELQGRVIEQQVGTGFSLFT*FVMLVS
Trigger: GGACACCAACATCACAAACCAGGTGAATAAGCTGAA...CCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTAAAGACAATAGACTATaGAAAACTCGCCACACAGTG +
Preference number: 4 (lower is better)
Translates to: SPTSTRRSRSRFSLFTWFKDNRL*KTRHTV
Trigger: CACTGTGTGGCGAGTTTTCCATAGTCTATTGTCTTT...AAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR CAA 72 bp CTTAATCTCATCACACACCTCTTCAAAGTTGGTGACTaGCTCCACAGGCACTTTCTCCTCTTCCTCAAGGGC +
Preference number: 4 (lower is better)
Translates to: LNLITHLFKVGD*LHRHFLLFLKG
Trigger: GCCCTTGAGGAAGAGGAGAAAGTGCCTGTGGAGCAAGTCACCAACTTTGAAGAGGTGTGTGATGAGATTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCATTCTGGCTTGGGGGTaGACTCAAAATCTTCAATAT +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKIILAWG*TQNLQY
Trigger: ATATTGAAGATTTTGAGTTCACCCCCAAGCCAGAAT...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR TCA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGATCACATTGGTCGTCTTaGAGACAAAATTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRSHWSS*RQNFLG
Trigger: TCCCAGAAAATTTTGTCTTCAAGACGACCAATGTGA...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTCGTCGGGCTCCATGGGAATAATGGTGCACAGAGCAAAGATGAATGGGTGGACTCACATTGGTCGTCTTaGAGACAAAATTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LVGLHGNNGAQSKDEWVDSHWSS*RQNFLG
Trigger: TCCCAGAAAATTTTGTCTTCAAGACGACCAATGTGA...GTCCACCCATTCATCTTTGCTCTGTGCACCATTATTCCCATGGAGCCCGACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCTCACATTGGTCGTCTTaGAGACAAAATTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKISHWSS*RQNFLG
Trigger: TCCCAGAAAATTTTGTCTTCAAGACGACCAATGTGA...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GAAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTCCCCCTCCATGTCGTTaGCATGGTGAGACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: EEIPSIERKKLSENGRSPPPPCR*HGETGE
Trigger: TTCTCCAGTCTCACCATGTCAACGACATGGAGGGGG...AGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp TTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAAACGCTGAAACAATCATaGGGAAGTAGTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LHTYLMNSRAGLLSSKWETLKQS*GSSSGR
Trigger: CCTGCCAGAACTACTTCCTCATGATTGTTTCAGCGT...TTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGAGTTCCGAGAGCCTGTaGCTTTCTTCTGAATCTTCT +
Preference number: 4 (lower is better)
Translates to: HLAHVFDELQGRVIEQQVSSESL*LSSESS
Trigger: AGAAGATTCAGAAGAAAGTCACAGGCTCTCGGAACT...CACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp ATAACCATGTCTACATGTTCCTTGCTGAGTAACACACAGAAGACTCAGGCTGCTGACCGCCCCATCCTCTaGGAAGGAAGAGTCTTTACA +
Preference number: 4 (lower is better)
Translates to: ITMSTCSLLSNTQKTQAADRPIL*EGRVFT
Trigger: TGTAAAGACTCTTCCTTCTCAGAGGATGGGGCGGTC...AGCAGCCTGAGTCTTCTGTGTGTTACTCAGCAAGGAACATGTAGACATGGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp AAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTGGACAAGGGCTGCAGTaGGCCAAAAGTGAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: KKFPASRERNCQRMEGLLGQGLQ*AKSEVH
Trigger: GTGCACCTCACTTTTGGCTCACTGCAGCCCTTGTCC...AAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGGATACTCCCTGGTTGGGTGTCTGCATTTCTaGTTTACATTTCATACTTGT +
Preference number: 4 (lower is better)
Translates to: LCGPVRGGTGRYGGYSLVGCLHF*FTFHTC
Trigger: ACAAGTATGAAATGTAAATCAGAAATGCAGACACCC...AACCAGGGAGTATCCGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp GCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGCATAGATGTTGTCTCAGTTTCCTTATCTaGAAAACAGACAATAACCGC +
Preference number: 4 (lower is better)
Translates to: ATEASGRSASPGCLHRCCLSFLI*KTDNNR
Trigger: GCGGTTATTGTCTGTTTTTCAGATAAGGAAACTGAG...ACAACATCTATGCAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR TCA 90 bp GAAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTGTGGGATGGCCACTATaGTCCACTCGGCTCCATCAA +
Preference number: 4 (lower is better)
Translates to: EEIPSIERKKLSENGRSPVGWPL*STRLHQ
Trigger: TTGATGGAGCCGAGTGGATCATAGTGGCCATCCCAC...AGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672002.1
CDS-3UTR GCA 90 bp GCTGATGGACGTAGACTTCTGCTCCCCGTAATCTTCCAGCTTCCGAGACATGGACCACTTTTGCAATTTTaGCCTGAAACTTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: ADGRRLLLPVIFQLPRHGPLLQF*PETSWR
Trigger: TCTCCAAGAAGTTTCAGGGCAAAATTGCAAAAGTGG...TCCATGTCTCGGAAGCTGGAAGATTACGGGGAGCAGAAGTCTACGTCCATCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAAGCTTATTGAACTCCTaGTCTTGCTTGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LAHVFDELQGRVIEQQVGSLLNS*SCLLGK
Trigger: CTTCCCCAACAAGCAAGAGCAGGAGTTCAATAAGCT...TCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp AAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTACGGAAGGTCCAGGATaGTGCGGGCAGTTCTTCGCA +
Preference number: 4 (lower is better)
Translates to: KKFPASRERNCQRMEGLLTEGPG*CGQFFA
Trigger: TGCGAAGAACTGCCCGCAGCATCCTGGACCTTCCGT...AAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ATATACCATCTGTGTCCAGCTCTAAGGGCCTCCCAATCTGCTCGATCAGCTCCCGCCTGTGGCAAAAACTaGAAAATGTTCCAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: IYHLCPALRASQSARSAPACGKN*KMFQLF
Trigger: AAACAACTGGAACATTTTGCAGTTTTTGCCACAGGC...GGGAGCTGATCGAGCAGATTGGGAGGCCCTTAGAGCTGGACACAGATGGTATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAAATCATCATAATCTaGTCTGTCTCAGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: HVFDELQGRVIEQQVGTGEIIII*SVSASG
Trigger: TCCTGATGCTGAGACAGACCAGATTATGATGATTTC...CCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CCACCTTTGGATCAGATGAGCCTCATCGGGTTCATTGAAGACACAAAAGGGGCCCAGAGCAAAGATGAATaGGTGGACGTACTTCATGTA +
Preference number: 4 (lower is better)
Translates to: PPLDQMSLIGFIEDTKGAQSKDE*VDVLHV
Trigger: TACATGAAGTACGTCCACCCATTCATCTTTGCTCTG...GGCCCCTTTTGTGTCTTCAATGAACCCGATGAGGCTCATCTGATCCAAAGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537064.5
CDS-3UTR CCA 90 bp TTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCTTCTTCAATCGCCTGGGTAGGAGATaGTCACTTTGGGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LSSAREPSSLNTAYLFFNRLGRR*SLWASS
Trigger: TGAAGAAGCCCAAAGTGACCATCTCCTACCCAGGCG...ATTGAAGAAGAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp TGTAGACCATGTTGGAGCGAGGAAGGACCCGATTTACCTTGCGATACGAAGCACTCAAACACCGAGGATTaGAAGATCTTAATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CRPCWSEEGPDLPCDTKHSNTED*KILISC
Trigger: GCAGCTGATTAAGATCTTCCAATCCTCGGTGTTTGA...GTGCTTCGTATCGCAAGGTAAATCGGGTCCTTCCTCGCTCCAACATGGTCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp TATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGGAAATTGTCAGAGAATaGAAGGTCTCCTTTGAATGG +
Preference number: 4 (lower is better)
Translates to: YLMNSRAGLLSSKWEPGREIVRE*KVSFEW
Trigger: CCATTCAAAGGAGACCTTCCATTCTCTGACAATTTC...CCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp CCATTCATTTGTGGTATGACCACAAAGGCAGCCCCTCTGACCTCAGTTTCCTTACCTGTGATGTACCTTTaGTCACATCGAAAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: PFICGMTTKAAPLTSVSLPVMYL*SHRKVA
Trigger: GGCCACTTTTCGATGTGACCAAAGGTACATCACAGG...TAAGGAAACTGAGGTCAGAGGGGCTGCCTTTGTGGTCATACCACAAATGAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR TCA 90 bp TTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACATTTCCTCGGTATCTaGCATTGTACCAATGAGCCA +
Preference number: 4 (lower is better)
Translates to: LHTYLMNSRAGLLSSKWEHFLGI*HCTNEP
Trigger: TGGCTCATTGGTACAATGTCAGATACCGAGGAAATG...TTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp ATAACCATGTCTACATGTTCCTTGCTGAGTAACACACAGAAGACTCAGGCTGCTGCTCTTCCACCTTGGTaGTGTGGATCTTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: ITMSTCSLLSNTQKTQAAALPPW*CGSSCR
Trigger: CCTACAAGAAGATCCACATCACCAAGGTGGAAGAGC...AGCAGCCTGAGTCTTCTGTGTGTTACTCAGCAAGGAACATGTAGACATGGTTAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp AGATGTCCTCTGGTAGGTTCCCAATGGGAATGTGAAAGTACCTGCTCATCTCGACGAATATCAAAGTCTTaGAGGGAAGAGCTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: RCPLVGSQWECESTCSSRRISKS*REELLS
Trigger: GCTCAAGAGCTCTTCCCTTCAAGACTTTGATATTCG...TCGAGATGAGCAGGTACTTTCACATTCCCATTGGGAACCTACCAGAGGACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp ACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGAAAATCTCGGTAGGATaGATGTTAATGAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TLHTYLMNSRAGLLSSKWKISVG*MLMSQP
Trigger: AGGCTGGCTCATTAACATGCATCCTACCGAGATTTT...CCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp GCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGACAGTCTCCACTTTTaGAATTTTGCCCTGAAACTT +
Preference number: 4 (lower is better)
Translates to: AHVFDELQGRVIEQQVGTDSLHF*NFALKL
Trigger: AAGTTTCAGGGCAAAATTGCAAAAGTGGAGACTGTC...GGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp TTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAAAGCTTATTGAACTCCTaGTCTTGCTTGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LHTYLMNSRAGLLSSKWESLLNS*SCLLGK
Trigger: CTTCCCCAACAAGCAAGAGCAGGAGTTCAATAAGCT...TTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR GCA 90 bp CACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGTCTTCTTCAATTTCTTaGCTTCTTCCTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HLAHVFDELQGRVIEQQVSSSIS*LLPWRL
Trigger: CAGCCTCCAAGGAAGAAGGCAAGAAATTGAAGAAGA...CACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ATAACCATGTCTACATGTTCCTTGCTGAGTAACACACAGAAGACTCAGGCTGCTTTCTCTGACTCCAGCTaGTGCTGGATCCGATGGTAT +
Preference number: 4 (lower is better)
Translates to: ITMSTCSLLSNTQKTQAAFSDSS*CWIRWY
Trigger: ATACCATCGGATCCAGCACCAGCTGGAGTCAGAGAA...AGCAGCCTGAGTCTTCTGTGTGTTACTCAGCAAGGAACATGTAGACATGGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp CAGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAATCAAACACCGAGGATTaGAAGATCTTAATCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QHLAHVFDELQGRVIEQQSNTED*KILISC
Trigger: GCAGCTGATTAAGATCTTCCAATCCTCGGTGTTTGA...TTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp ACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGTCCGCCATAGTTAGATaGATCCATCCAGAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: TLHTYLMNSRAGLLSSKWSAIVR*IHPEKK
Trigger: TTTCTTCTCTGGATGGATCCATCTAACTATGGCGGA...CCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
3UTR CAA 72 bp GAGATGGTCACTTTGGGCTTCTTCACATTGGTCGTCTaGAAGACAAAATTTTCTGGGAAGCTGTTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: EMVTLGFFTLVV*KTKFSGKLLGR
Trigger: CCTGCCCAACAGCTTCCCAGAAAATTTTGTCTTCAAGACGACCAATGTGAAGAAGCCCAAAGTGACCATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp AAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTTTGCTCCAGGCTTATTaGAGTCACAGGCAGCACAGG +
Preference number: 4 (lower is better)
Translates to: KKFPASRERNCQRMEGLLLLQAY*SHRQHR
Trigger: CCTGTGCTGCCTGTGACTTCAATAAGCCTGGAGCAA...AAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp ACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGTCTTGCAGTCCACAGTaGATACGAGATGAAACTTTT +
Preference number: 4 (lower is better)
Translates to: TLHTYLMNSRAGLLSSKWSCSPQ*IRDETF
Trigger: AAAAGTTTCATCTCGTATTCACTGTGGACTGCAAGA...CCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTTTCCGATCTGTTCCATaGAGACCTGGGTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: KKFPASRERNCQRMEGLLFRSVP*RPGCGW
Trigger: CCATCCACACCCAGGTCTTCATGGAACAGATCGGAA...AAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp CCTTACCTCATCGGGTTCATTGAAGACACAAAAGGGGCCTTCATATTCTGGCTTCATCACCTGGTTGTCTaGATAGATGTTGTGGTACTG +
Preference number: 4 (lower is better)
Translates to: PYLIGFIEDTKGAFIFWLHHLVV*IDVVVL
Trigger: CAGTACCACAACATCTATGCAGACAACCAGGTGATG...AAGCCAGAATATGAAGGCCCCTTTTGTGTCTTCAATGAACCCGATGAGGTAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS-3UTR GCA 90 bp ACAGGAAACATCTCTGAGAGCTCAGTGGAGTTCCGAGAGCCTGTGACTTTCTTCGCCTGTGGCAAAAACTaGAAAATGTTCCAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: TGNISESSVEFREPVTFFACGKN*KMFQLF
Trigger: AAACAACTGGAACATTTTGCAGTTTTTGCCACAGGC...GAAGAAAGTCACAGGCTCTCGGAACTCCACTGAGCTCTCAGAGATGTTTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR GCA 90 bp TCAAAGCCCTTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCATCTGTGGTGAATACTaGAAACATAAGGAGACCTCT +
Preference number: 4 (lower is better)
Translates to: SKPLSSAREPSSLNTAYLICGEY*KHKETS
Trigger: AGAGGTCTCCTTATGTTTGCAGTATTCACCACAGAT...GAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAAGGGCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp AAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTCGCCTGGGTAGGAGATaGTCACTTTGGGCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: KKFPASRERNCQRMEGLLRLGRR*SLWASS
Trigger: TGAAGAAGCCCAAAGTGACCATCTCCTACCCAGGCG...AAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp GAAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTAGTAGTCAGCCACCTTaGCTACAGAGCCATACACCT +
Preference number: 4 (lower is better)
Translates to: EEIPSIERKKLSENGRSPSSQPP*LQSHTP
Trigger: AGGTGTATGGCTCTGTAGCCAAGGTGGCTGACTACT...AGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTCCTCATCGGGTTCATTaGAGACACAAAAGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: KKFPASRERNCQRMEGLLPHRVH*RHKRGL
Trigger: AAGGCCCCTTTTGTGTCTTCAATGAACCCGATGAGG...AAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR TCA 90 bp GAAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTACGCTGAAACAATCATaGGGAAGTAGTTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: EEIPSIERKKLSENGRSPTLKQS*GSSSGR
Trigger: CCTGCCAGAACTACTTCCTCATGATTGTTTCAGCGT...AGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp CTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAGGGTGTCTGCATTTCTaGTTTACATTTCATACTTGT +
Preference number: 4 (lower is better)
Translates to: LAHVFDELQGRVIEQQVGGCLHF*FTFHTC
Trigger: ACAAGTATGAAATGTAAATCAGAAATGCAGACACCC...TCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTTTTCTGGGAAGCTGTTaGGCAGGACGCACCATATAC +
Preference number: 4 (lower is better)
Translates to: KKFPASRERNCQRMEGLLFLGSC*AGRTIY
Trigger: GTATATGGTGCGTCCTGCCCAACAGCTTCCCAGAAA...AAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CCA 90 bp AGACTATGGAAAACTCGCCACACAGTGGTCTCTGGCTCTGCCATTAAGACTAAGGAAATTGTCAGAGAATaGAAGGTCTCCTTTGAATGG +
Preference number: 4 (lower is better)
Translates to: RLWKTRHTVVSGSAIKTKEIVRE*KVSFEW
Trigger: CCATTCAAAGGAGACCTTCCATTCTCTGACAATTTC...CTTAGTCTTAATGGCAGAGCCAGAGACCACTGTGTGGCGAGTTTTCCATAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
3UTR CAA 72 bp GTAGTCCCAATCCAGAATTGCTCGAATATCAAAGTCTaGAAGGGAAGAGCTCTTGAGCCATTTCCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: VVPIQNCSNIKV*KGRALEPFPEK
Trigger: TTTCTCCGGAAATGGCTCAAGAGCTCTTCCCTTCAAGACTTTGATATTCGAGCAATTCTGGATTGGGACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR TCA 90 bp AAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTTGTGGAAGGACAGCCTaGTGTAATTTCGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: KKFPASRERNCQRMEGLLCGRTA*CNFASN
Trigger: GTTTGAAGCGAAATTACATCAGGCTGTCCTTCCACA...AAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CCA 90 bp AAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTAAGGTCTCCTTTGAATaGATGCTGCTGGTGATGTAC +
Preference number: 4 (lower is better)
Translates to: KKFPASRERNCQRMEGLLKVSFE*MLLVMY
Trigger: GTACATCACCAGCAGCATCCATTCAAAGGAGACCTT...AAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS TCA 90 bp ACAGGCATGCTGGTCTCCTTCACCCCGCGGCACTTCAGGCAGACCTaGAAGGGAGCAGCCCCGATGGGCGCCAGCCCTCCCGCGCTGGCC +
Preference number: 5 (lower is better)
Translates to: TGMLVSFTPRHFRQT*KGAAPMGASPPALA
Trigger: GGCCAGCGCGGGAGGGCTGGCGCCCATCGGGGCTGCTCCCTTTCAGGTCTGCCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS CCA 90 bp CCGCGCCTGGGTCCGCGCGCCGCCGCCCGCCGCTCCTCAGAGACATaGAGCCGTTGGCTACCACCTCTGCTTCAGGGGAGAAATTTGGCG +
Preference number: 5 (lower is better)
Translates to: PRLGPRAAARRSSET*SRWLPPLLQGRNLA
Trigger: CGCCAAATTTCTCCCCTGAAGCAGAGGTGGTAGCCAACGGCTCCATGTCTCTGAGGAGCGGCGGGCGGCGGCGCGCGGACCCAGGCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539357.1
ENST00000672742.1
CDS CCA 90 bp TCACCCCGCGGCACTTCAGGCAGACCTGAAAGGGAGCAGCCCCGATaGGCGCCAGCCCTCCCGCGCTGGCCAGACCTGCCTGCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: SPRGTSGRPEREQPR*APALPRWPDLPAAS
Trigger: AGAAGCAGCAGGCAGGTCTGGCCAGCGCGGGAGGGCTGGCGCCCATCGGGGCTGCTCCCTTTCAGGTCTGCCTGAAGTGCCGCGGGGTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS GCA 90 bp ACGCCGTGCACCACCACACGGCAGCTTGGCGCGTCCCCCAGCCTCTaGTCAGATGCCCCTCGGCAAGACCTTCCTGTGGCCGAGCTGTGC +
Preference number: 5 (lower is better)
Translates to: TPCTTTRQLGASPSL*SDAPRQDLPVAELC
Trigger: GCACAGCTCGGCCACAGGAAGGTCTTGCCGAGGGGCATCTGAGCAGAGGCTGGGGGACGCGCCAAGCTGCCGTGTGGTGGTGCACGGCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS CCA 90 bp GGTCCGCGCGCCGCCGCCCGCCGCTCCTCAGAGACATGGAGCCGTTaGCTACCACCTCTGCTTCAGGGGAGAAATTTGGCGCGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: GPRAAARRSSETWSR*LPPLLQGRNLARSH
Trigger: GTGGGAGCGCGCCAAATTTCTCCCCTGAAGCAGAGGTGGTAGCCAACGGCTCCATGTCTCTGAGGAGCGGCGGGCGGCGGCGCGCGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS GCA 90 bp GCCCCGATGGGCGCCAGCCCTCCCGCGCTGGCCAGACCTGCCTGCTaGTTCTTCACAGGCTCGCGAGACACATTCGTGGGCCCATCAGTA +
Preference number: 5 (lower is better)
Translates to: APMGASPPALARPAC*FFTGSRDTFVGPSV
Trigger: TACTGATGGGCCCACGAATGTGTCTCGCGAGCCTGTGAAGAAGCAGCAGGCAGGTCTGGCCAGCGCGGGAGGGCTGGCGCCCATCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS-3UTR CAA 90 bp GGGCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAATGCACTGGGGCGCCTaGTACTCCCCCTGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: GHSQPRSRPASSGALARPMHWGA*YSPWLS
Trigger: GGACAGCCAGGGGGAGTACAAGGCGCCCCAGTGCAT...TGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GGGCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAAGGCTGGGCATCTGGTaGCTGCGCACAGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GHSQPRSRPASSGALARPRLGIW*LRTVSS
Trigger: GCTGGACACTGTGCGCAGCAACCAGATGCCCAGCCT...TGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGAGGCTGGGCATCTGGTaGCTGCGCACAGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: ALAASLTACFFRCSGEARRLGIW*LRTVSS
Trigger: GCTGGACACTGTGCGCAGCAACCAGATGCCCAGCCT...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS TCA 90 bp GCTGAGCCGAGGCAGATGAGGGAGAGCCCACCTGGGTGTGGATGGTaGGGGCGAAGTCTCCCGCGCAGCTGCAGTACACAGGCATGCTGG +
Preference number: 5 (lower is better)
Translates to: AEPRQMRESPPGCGW*GRSLPRSCSTQACW
Trigger: CCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGACTTCGCCCTCACCATCCACACCCAGGTGGGCTCTCCCTCATCTGCCTCGGCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534922.5
CDS GCA 90 bp GGAAGGGGCTGTGAGAAGCGCCTGGTGACGGGCGAGTCTCCTGAGTaGAGCTGCACGCACTCTGGCCTCCCACCTGCACTTGAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: GRGCEKRLVTGESPE*SCTHSGLPPALEPF
Trigger: GAAGGGCTCAAGTGCAGGTGGGAGGCCAGAGTGCGTGCAGCTGCACTCAGGAGACTCGCCCGTCACCAGGCGCTTCTCACAGCCCCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541627.2
CDS CCA 90 bp ACAGTCACCCCTCTCCGGGCCCTCCAGTGGAACATGCCTGGAGCCTaGAGAGGAGGCCCCTCGGCTCACAAAGTCCCAACTGCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: TVTPLRALQWNMPGA*RGGPSAHKVPTAGQ
Trigger: CTGCCCAGCAGTTGGGACTTTGTGAGCCGAGGGGCCTCCTCTCCAGGCTCCAGGCATGTTCCACTGGAGGGCCCGGAGAGGGGTGACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416953.2
ENST00000544692.5
CDS-3UTR CAA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGTCCAGCGTGCTGCCCTaGAGGAAGGCCTCAAACACC +
Preference number: 5 (lower is better)
Translates to: HSQPRSRPASSGALARPGSSVLP*RKASNT
Trigger: GGTGTTTGAGGCCTTCCTCAAGGGCAGCACGCTGGA...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCGATGACCCCAGGCGCTaGAACTCAGCGATGAGCTGC +
Preference number: 5 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGDDPRR*NSAMSC
Trigger: GCAGCTCATCGCTGAGTTCAAGCGCCTGGGGTCATC...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp AGGGCGGGAGGCTGCCCCAAGATTTCCTGCCAGGGCACAGTCGGCGTGAGGTCCGATGACCCCAGGCGCTaGAACTCAGCGATGAGCTGC +
Preference number: 5 (lower is better)
Translates to: RAGGCPKISCQGTVGVRSDDPRR*NSAMSC
Trigger: GCAGCTCATCGCTGAGTTCAAGCGCCTGGGGTCATC...GGACCTCACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCAGCCTCCCGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGTCCAGGGCAGGGTTATaGAGCAGCAAGTGGGAACCG +
Preference number: 5 (lower is better)
Translates to: HGDVALASGGLARTQRHPSRAGL*SSKWEP
Trigger: CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGA...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS TCA 90 bp ATGGGCAGGATCTCAGGAGAGGAAGGGGCTGTGAGAAGCGCCTGGTaGCGGGCGAGTCTCCTGAGTGCAGCTGCACGCACTCTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: MGRISGEEGAVRSAW*RASLLSAAARTLAS
Trigger: GGAGGCCAGAGTGCGTGCAGCTGCACTCAGGAGACTCGCCCGTCACCAGGCGCTTCTCACAGCCCCTTCCTCTCCTGAGATCCTGCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541627.2
CDS GCA 90 bp GGCTGTGAGAAGCGCCTGGTGACGGGCGAGTCTCCTGAGTGCAGCTaGACGCACTCTGGCCTCCCACCTGCACTTGAGCCCTTCCTAGGA +
Preference number: 5 (lower is better)
Translates to: GCEKRLVTGESPECS*THSGLPPALEPFLG
Trigger: TCCTAGGAAGGGCTCAAGTGCAGGTGGGAGGCCAGAGTGCGTGCAGCTGCACTCAGGAGACTCGCCCGTCACCAGGCGCTTCTCACAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541627.2
CDS GCA 90 bp CTGGAGGGAAGACAGTCACCCCTCTCCGGGCCCTCCAGTGGAACATaGCTGGAGCCTGGAGAGGAGGCCCCTCGGCTCACAAAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: LEGRQSPLSGPSSGT*LEPGEEAPRLTKSQ
Trigger: TTGGGACTTTGTGAGCCGAGGGGCCTCCTCTCCAGGCTCCAGGCATGTTCCACTGGAGGGCCCGGAGAGGGGTGACTGTCTTCCCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544692.5
CDS GCA 90 bp TCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATaGAGTGGTACACGGCCACGATGTACGCTGTGGAGAGGCACACAC +
Preference number: 5 (lower is better)
Translates to: SRGCSLEHCASARPS*SGTRPRCTLWRGTH
Trigger: GTGTGTGCCTCTCCACAGCGTACATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544692.5
CDS CCA 90 bp AGGGAAGACAGTCACCCCTCTCCGGGCCCTCCAGTGGAACATGCCTaGAGCCTGGAGAGGAGGCCCCTCGGCTCACAAAGTCCCAACTGC +
Preference number: 5 (lower is better)
Translates to: REDSHPSPGPPVEHA*SLERRPLGSQSPNC
Trigger: GCAGTTGGGACTTTGTGAGCCGAGGGGCCTCCTCTCCAGGCTCCAGGCATGTTCCACTGGAGGGCCCGGAGAGGGGTGACTGTCTTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416953.2
ENST00000544692.5
CDS CCA 90 bp CCAGCGTCATCTCGATGGCAGAGGAGTCGTAGGGCGCCTGACAGTTaGAGCAGAGCCACTGAGGCAGGACCGCCCCATCCTAGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: PASSRWQRSRRAPDS*SRATEAGPPHPRQS
Trigger: GCTCTGCCTAGGATGGGGCGGTCCTGCCTCAGTGGCTCTGCTCCAACTGTCAGGCGCCCTACGACTCCTCTGCCATCGAGATGACGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541627.2
CDS CCA 90 bp GGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTaGTACACGGCCACGATGTACGCTGTGGAGAGGCACACACACCAC +
Preference number: 5 (lower is better)
Translates to: GVLPGALRLSPSFMQ*YTATMYAVERHTHH
Trigger: GTGGTGTGTGTGCCTCTCCACAGCGTACATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544692.5
CDS-3UTR CAA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCGAGTTCAGGATGCACTaGTGGGCCAGCTGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLEFRMH*WASCSE
Trigger: CTCGCTGCAGCTGGCCCACAAGTGCATCCTGAACTC...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCTCCAGCGTGCTGCCCTaGAGGAAGGCCTCAAACACC +
Preference number: 5 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGASSVLP*RKASNT
Trigger: GGTGTTTGAGGCCTTCCTCAAGGGCAGCACGCTGGA...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CCTCCGGGTCTAGCTCCACGGGATCATAGCCTAGCTTGGCCTTGGCGGCCGCCTGGCATGTTGGCTGCCTaGCTGTACAGCACGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PPGLAPRDHSLAWPWRPPGMLAA*LYSTSS
Trigger: GCTGGACGTGCTGTACAGCAAGGCAGCCAACATGCC...AGGCGGCCGCCAAGGCCAAGCTAGGCTATGATCCCGTGGAGCTAGACCCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCCACGGGGATGTGGCCTaGGCATCAGGAGGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRHGDVA*ASGGLA
Trigger: TGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS TCA 90 bp CTTATCCGTCCACTGACTCCGTTCCAGGCGCTTGAGTGCCGAAACTaGGGAAGTGGCGCCATCATCCCTGCTGGCCTCGCCATCCGCGCC +
Preference number: 5 (lower is better)
Translates to: LIRPLTPFQALECRN*GSGAIIPAGLAIRA
Trigger: GGCGCGGATGGCGAGGCCAGCAGGGATGATGGCGCCACTTCCTCAGTTTCGGCACTCAAGCGCCTGGAACGGAGTCAGTGGACGGATAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000535270.5
ENST00000537064.5
ENST00000539357.1
ENST00000672742.1
CDS GCA 90 bp GCCTGGAGCCTGGAGAGGAGGCCCCTCGGCTCACAAAGTCCCAACTaGTGGGCAGGCTCCGCCCGATCTGATTTTCCCTGTCTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: AWSLERRPLGSQSPN*WAGSARSDFPCLPS
Trigger: AGAAGGGAGACAGGGAAAATCAGATCGGGCGGAGCCTGCCCAGCAGTTGGGACTTTGTGAGCCGAGGGGCCTCCTCTCCAGGCTCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416953.2
ENST00000544692.5
CDS-3UTR CAA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCCTCCGTTCCAGGCGCTaGAGTGCCGAAACTGAGGAA +
Preference number: 5 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLLRSRR*SAETEE
Trigger: TTCCTCAGTTTCGGCACTCAAGCGCCTGGAACGGAG...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp TCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTTGGGGAAGATGATGTaGGCGTGGAAGGCCTGCACC +
Preference number: 5 (lower is better)
Translates to: SLTACFFRCSGEARATSCLGKMM*AWKACT
Trigger: GGTGCAGGCCTTCCACGCCAACATCATCTTCCCCAA...GCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCTTGGTCAGGATGATGTaGGGGTACATGGCCCCCACG +
Preference number: 5 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLLVRMM*GYMAPT
Trigger: CGTGGGGGCCATGTACCCCAACATCATCCTGACCAA...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACAAGAGTTCAGGATGCACTaGTGGGCCAGCTGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: GAAGPAAATSSCGTGARQEFRMH*WASCSE
Trigger: CTCGCTGCAGCTGGCCCACAAGTGCATCCTGAACTC...TTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGGCCTGGGTGATGATGTaGGCCCCTGTGAAGCAGACG +
Preference number: 5 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQAWVMM*APVKQT
Trigger: CGTCTGCTTCACAGGGGCCAACATCATCACCCAGGC...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp ATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCCTCCAGGCCTGGGTGATGATGTaGGCCCCTGTGAAGCAGACG +
Preference number: 5 (lower is better)
Translates to: IVAGRGTGSLTTRDHVLQAWVMM*APVKQT
Trigger: CGTCTGCTTCACAGGGGCCAACATCATCACCCAGGC...CTGGAGGACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGGGCATGTTGGCTGCCTaGCTGTACAGCACGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQGMLAA*LYSTSS
Trigger: GCTGGACGTGCTGTACAGCAAGGCAGCCAACATGCC...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp TCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCCCATGTCAGGAGCACTaGGCCTCGGACTGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: SLTACFFRCSGEARATSCPCQEH*ASDCLL
Trigger: CAGAAGACAGTCCGAGGCCAAGTGCTCCTGACATGG...GCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCCCATGTCAGGAGCACTaGGCCTCGGACTGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLPCQEH*ASDCLL
Trigger: CAGAAGACAGTCCGAGGCCAAGTGCTCCTGACATGG...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGAGCTGCCACTTCTTCTaGTGGAACCGGAGCCAGACA +
Preference number: 5 (lower is better)
Translates to: ALAASLTACFFRCSGEARSCHFF*WNRSQT
Trigger: TGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCT...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGCTCACCAGCTGTTTATaGACCACACACACACAGCCC +
Preference number: 5 (lower is better)
Translates to: HGDVALASGGLARTQRHPLTSCL*TTHTQP
Trigger: GGGCTGTGTGTGTGTGGTCAATAAACAGCTGGTGAG...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CATGAACTCGCCCCTCCACTGCCAGGCCATCTTCCGCTGGCAGTTTGCTCCAGGATCCCGAAGAGCGCTTaGTGGGCCTGTGCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: HELAPPLPGHLPLAVCSRIPKSA*WACAWW
Trigger: CCACCACGCACAGGCCCACAAAGCGCTCTTCGGGAT...CCTGGAGCAAACTGCCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGTTCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp CTGCAGCAGCCACTCCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCGATGACCCCAGGCGCTaGAACTCAGCGATGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LQQPLQGLQEVRHAVVLGDDPRR*NSAMSC
Trigger: GCAGCTCATCGCTGAGTTCAAGCGCCTGGGGTCATC...GCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGGAGTGGCTGCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCTCAGCCTGATGCAGTGCAAGTCACTGCCAACGAGCGCCCACAGCCTGAACAGCACGGGGATGTGGCCTaGGCATCAGGAGGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: AQPDAVQVTANERPQPEQHGDVA*ASGGLA
Trigger: TGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG...CTGTTCAGGCTGTGGGCGCTCGTTGGCAGTGACTTGCACTGCATCAGGCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp AAGACCTGGGTGTGGATGGTGAGGGCGAAGTCTCCCGCGCAGCTGCAGTACACACACGGGGATGTGGCCTaGGCATCAGGAGGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: KTWVWMVRAKSPAQLQYTHGDVA*ASGGLA
Trigger: TGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG...TGTGTACTGCAGCTGCGCGGGAGACTTCGCCCTCACCATCCACACCCAGGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS GCA 90 bp AGAGCAAGAGTGCGAGAGGTCACCAGCCCAGCCTCCAGACCACAGTaGCATGGGCAGGATCTCAGGAGAGGAAGGGGCTGTGAGAAGCGC +
Preference number: 5 (lower is better)
Translates to: RARVREVTSPASRPQ*HGQDLRRGRGCEKR
Trigger: GCGCTTCTCACAGCCCCTTCCTCTCCTGAGATCCTGCCCATGGCACTGTGGTCTGGAGGCTGGGCTGGTGACCTCTCGCACTCTTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541627.2
CDS CCA 90 bp TGGAGCCTGGAGAGGAGGCCCCTCGGCTCACAAAGTCCCAACTGCTaGGCAGGCTCCGCCCGATCTGATTTTCCCTGTCTCCCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: WSLERRPLGSQSPNC*AGSARSDFPCLPSC
Trigger: GCAAGAAGGGAGACAGGGAAAATCAGATCGGGCGGAGCCTGCCCAGCAGTTGGGACTTTGTGAGCCGAGGGGCCTCCTCTCCAGGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416953.2
ENST00000544692.5
CDS-3UTR CAA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGCTCCGTTCCAGGCGCTaGAGTGCCGAAACTGAGGAA +
Preference number: 5 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQLRSRR*SAETEE
Trigger: TTCCTCAGTTTCGGCACTCAAGCGCCTGGAACGGAG...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CAA 90 bp CTCCTCCTCACGGGGGTGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGACCATGATGGTGGGTTaGGTCTCCTGGACGTGTTCA +
Preference number: 5 (lower is better)
Translates to: LLLTGVLPGALRLSPSFMTMMVG*VSWTCS
Trigger: TGAACACGTCCAGGAGACCAAACCCACCATCATGGT...CATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCACCCCCGTGAGGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp TGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCAGCCATGCACTGGGGCGCCTaGTACTCCCCCTGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: CEAVGPAHFSMQTGETPAMHWGA*YSPWLS
Trigger: GGACAGCCAGGGGGAGTACAAGGCGCCCCAGTGCAT...GGCTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CAA 90 bp CCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGAGCACCTCCATGTTCTaGCAGCGCTTCACCTCAGCC +
Preference number: 5 (lower is better)
Translates to: PPGPWEPVSSQSPISGSQSTSMF*QRFTSA
Trigger: GGCTGAGGTGAAGCGCTGCAAGAACATGGAGGTGCT...CTGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CAA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCTTGACCTCAAAGCCCTaGAGCTCAGCCAGAGAACCG +
Preference number: 5 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLLTSKP*SSAREP
Trigger: CGGTTCTCTGGCTGAGCTCAAGGGCTTTGAGGTCAA...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGTACGCTGAGTTCCCCGCGGCGTTaGACCTCAAAGCCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: HCASARPSCSGTRPRCTLSSPRR*TSKPLS
Trigger: GCTCAAGGGCTTTGAGGTCAAACGCCGCGGGGAACT...CAGCGTACATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCAGCTGCCACTTCTTCTaGTGGAACCGGAGCCAGACA +
Preference number: 5 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLSCHFF*WNRSQT
Trigger: TGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCT...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGCTCACCAGCTGTTTATaGACCACACACACACAGCCC +
Preference number: 5 (lower is better)
Translates to: ALAASLTACFFRCSGEARLTSCL*TTHTQP
Trigger: GGGCTGTGTGTGTGTGGTCAATAAACAGCTGGTGAG...CCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp AGGGCGGGAGGCTGCCCCAAGATTTCCTGCCAGGGCACAGTCGGCGTGAGGTCCCTCACCAGCTGTTTATaGACCACACACACACAGCCC +
Preference number: 5 (lower is better)
Translates to: RAGGCPKISCQGTVGVRSLTSCL*TTHTQP
Trigger: GGGCTGTGTGTGTGTGGTCAATAAACAGCTGGTGAG...GGACCTCACGCCGACTGTGCCCTGGCAGGAAATCTTGGGGCAGCCTCCCGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GATCATGCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTAGGCTGGGCATCTGGTaGCTGCGCACAGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: DHAPGSMALPVQDPIVDLRLGIW*LRTVSS
Trigger: GCTGGACACTGTGCGCAGCAACCAGATGCCCAGCCT...AAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCATGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGAGCTTCTTCATCATGTaGTGGAGTGTGCGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: HSQPRSRPASSGALARPGSFFIM*WSVRCR
Trigger: CCTGCACCGCACACTCCACAACATGATGAAGAAGCT...CCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GATCCCGAAGAGCGCTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGCACGGGGATGTGGCCTaGGCATCAGGAGGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: DPEERFVGLCVVVQVDMAHGDVA*ASGGLA
Trigger: TGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG...CGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAGCGCTCTTCGGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp TGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCAGCCAGCCCCACCAGGGCCTaGGGAACCCGTCTCGTCTCA +
Preference number: 5 (lower is better)
Translates to: CEAVGPAHFSMQTGETPASPTRA*GTRLVS
Trigger: TGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGGCT...GGCTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp ACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGCCCTGTGATGTACCTTaGGTCACATCGAAAAGTGGC +
Preference number: 5 (lower is better)
Translates to: TGMWPWHQEAWHGRRGTRPCDVP*VTSKSG
Trigger: GCCACTTTTCGATGTGACCAAAGGTACATCACAGGG...CCGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS GCA 90 bp ACTCCAGGGCACACGGGCAGGCGGCATGCACGACTCACCAGGTCCTaGAGGGTGAAGGCCATCAGCTTCTTCTGTAGAACTTCCACCAGC +
Preference number: 5 (lower is better)
Translates to: TPGHTGRRHARLTRS*RVKAISFFCRTSTS
Trigger: GCTGGTGGAAGTTCTACAGAAGAAGCTGATGGCCTTCACCCTGCAGGACCTGGTGAGTCGTGCATGCCGCCTGCCCGTGTGCCCTGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS CCA 90 bp TCAACCAGTGTGGACAGAACAGTCCATCAGGCTCAGGGCATGGACTaGTCTGCAGGGCAGGCCCCTTGGAAGACACCAGGGCGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: STSVDRTVHQAQGMD*SAGQAPWKTPGRAS
Trigger: TGAGGCACGCCCTGGTGTCTTCCAAGGGGCCTGCCCTGCAGACCAGTCCATGCCCTGAGCCTGATGGACTGTTCTGTCCACACTGGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS CCA 90 bp TCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGTACGCTGTaGAGAGGCACACACACCACAGGCCCTGAGTCGGGCTGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: SARPSCSGTRPRCTL*RGTHTTGPESGCCK
Trigger: TTTGCAGCAGCCCGACTCAGGGCCTGTGGTGTGTGTGCCTCTCCACAGCGTACATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544692.5
CDS-3UTR CAA 90 bp CACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGATCTCCTTCCTCACTTaGACAAGATCCTCCACAGTG +
Preference number: 5 (lower is better)
Translates to: HGDVALASGGLARTQRHPISFLT*TRSSTV
Trigger: CACTGTGGAGGATCTTGTCAAAGTGAGGAAGGAGAT...CGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp ACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGTTCAAAGTTGGTGACTaGCTCCACAGGCACTTTCTC +
Preference number: 5 (lower is better)
Translates to: TGMWPWHQEAWHGRRGTRFKVGD*LHRHFL
Trigger: GAGAAAGTGCCTGTGGAGCAAGTCACCAACTTTGAA...CCGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp ACGGGGATGTGGCCTTGGCATCAGGAGGCCTGGCACGGACGCAGAGGCACCCGGTTCTTTTTCCACACCTaGTGGAGCCCTTTGAACTCG +
Preference number: 5 (lower is better)
Translates to: TGMWPWHQEAWHGRRGTRFFFHT*WSPLNS
Trigger: CGAGTTCAAAGGGCTCCACAAGGTGTGGAAAAAGAA...CCGGGTGCCTCTGCGTCCGTGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACAAAGCTGCCACTTCTTCTaGTGGAACCGGAGCCAGACA +
Preference number: 5 (lower is better)
Translates to: GAAGPAAATSSCGTGARQSCHFF*WNRSQT
Trigger: TGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCT...TTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGCTGACAGCTCAGCGTaGATCTCGTTGATGTGTTCC +
Preference number: 5 (lower is better)
Translates to: APWSTAPQPVLHAVVHGHADSSA*ISLMCS
Trigger: GGAACACATCAACGAGATCAACGCTGAGCTGTCAGC...GTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp ACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCTGCTTTCTGGGAGTCTaGCAGTCCACAGTGAATACG +
Preference number: 5 (lower is better)
Translates to: TRSLAHGLLLQVLWRGQGCFLGV*QSTVNT
Trigger: CGTATTCACTGTGGACTGCAAGACTCCCAGAAAGCA...GCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CCCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAGTAAATCCTCCACGTaGGATTCCTCCGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: PHQGLGNPSRLRAQSQGASKSST*DSSASS
Trigger: GGAAGAGGCGGAGGAATCCAACGTGGAGGATTTACT...GGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAACCTGGTTTGTGATGTaGGTGTCCAGGGACAGCACC +
Preference number: 5 (lower is better)
Translates to: PTRALGTRLVSEPNLREPTWFVM*VSRDST
Trigger: GGTGCTGTCCCTGGACACCAACATCACAAACCAGGT...TGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCAGCCCCACCAGGGCCTaGGGAACCCGTCTCGTCTCA +
Preference number: 5 (lower is better)
Translates to: VQEATEAWKSIHCVRNGASPTRA*GTRLVS
Trigger: TGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGGCT...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp ATCGTAGCTGGCCGGGGCACTGGCAGCCTGACCACCCGTGATCATGTCCTCCAGAGAGACATGGAGCCGTaGGCTACCACCTCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: IVAGRGTGSLTTRDHVLQRDMEP*ATTSAS
Trigger: TGAAGCAGAGGTGGTAGCCAACGGCTCCATGTCTCT...CTGGAGGACATGATCACGGGTGGTCAGGCTGCCAGTGCCCCGGCCAGCTACGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS TCA 90 bp CCTCGGCTCACAAAGTCCCAACTGCTGGGCAGGCTCCGCCCGATCTaGTTTTCCCTGTCTCCCTTCTTGCGATACCATGGCACAGGAGCC +
Preference number: 5 (lower is better)
Translates to: PRLTKSQLLGRLRPI*FSLSPFLRYHGTGA
Trigger: GGCTCCTGTGCCATGGTATCGCAAGAAGGGAGACAGGGAAAATCAGATCGGGCGGAGCCTGCCCAGCAGTTGGGACTTTGTGAGCCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416953.2
ENST00000544692.5
CDS TCA 90 bp GGCACACGGGCAGGCGGCATGCACGACTCACCAGGTCCTGCAGGGTaGAGGCCATCAGCTTCTTCTGTAGAACTTCCACCAGCGTCATCT +
Preference number: 5 (lower is better)
Translates to: GTRAGGMHDSPGPAG*RPSASSVELPPASS
Trigger: AGATGACGCTGGTGGAAGTTCTACAGAAGAAGCTGATGGCCTTCACCCTGCAGGACCTGGTGAGTCGTGCATGCCGCCTGCCCGTGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS GCA 90 bp AAAGGGGCAGGAGAGGAGGTGCCACCTAGTGTTCTCTGCAGGATGTaGAGGCGACGCTGCAGCAGCAGCTGCGTGTTTCTCTGGGATCCT +
Preference number: 5 (lower is better)
Translates to: KGAGEEVPPSVLCRM*RRRCSSSCVFLWDP
Trigger: AGGATCCCAGAGAAACACGCAGCTGCTGCTGCAGCGTCGCCTGCACATCCTGCAGAGAACACTAGGTGGCACCTCCTCTCCTGCCCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS GCA 90 bp TTGTGCAGGAAAGGGGCAGGAGAGGAGGTGCCACCTAGTGTTCTCTaGAGGATGTGCAGGCGACGCTGCAGCAGCAGCTGCGTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: LCRKGAGEEVPPSVL*RMCRRRCSSSCVFL
Trigger: GAGAAACACGCAGCTGCTGCTGCAGCGTCGCCTGCACATCCTGCAGAGAACACTAGGTGGCACCTCCTCTCCTGCCCCTTTCCTGCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS GCA 90 bp AGTGAACCCAGGAGCCACCTCCTAAGTCGACATGGGAAGCGCCCCTaGACCACGCAACGCCCTCCCTCTCAAATGCTGCCCAGTTACTCA +
Preference number: 5 (lower is better)
Translates to: SEPRSHLLSRHGKRP*TTQRPPSQMLPSYS
Trigger: TGAGTAACTGGGCAGCATTTGAGAGGGAGGGCGTTGCGTGGTGCAGGGGCGCTTCCCATGTCGACTTAGGAGGTGGCTCCTGGGTTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS GCA 90 bp GTCCTTCTGGAAGCCTATCTCCTGCTGCATGCTCAGACCGTGGACTaGTGCCCGGGCCTCCACAAATGGCCTGGGTTGGAAAGAGGACAG +
Preference number: 5 (lower is better)
Translates to: VLLEAYLLLHAQTVD*CPGLHKWPGLERGQ
Trigger: CTGTCCTCTTTCCAACCCAGGCCATTTGTGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAGCAGGAGATAGGCTTCCAGAAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS GCA 90 bp AGCCAGCCCTCGGTTATGAGTAAAATGCACGACCTCATCCCACGGTaGCAGCGCCTTCCCTACACCCACCCTCGCTGTGGATGTTCCACC +
Preference number: 5 (lower is better)
Translates to: SQPSVMSKMHDLIPR*QRLPYTHPRCGCST
Trigger: GGTGGAACATCCACAGCGAGGGTGGGTGTAGGGAAGGCGCTGGCACCGTGGGATGAGGTCGTGCATTTTACTCATAACCGAGGGCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS CCA 90 bp CGCCCCTCTGCAGAACACTGGAAAGCAGAGCTGTGTACGCGTCGCTaGCGTGATCCTGCTCCCTGTTCTTCTTCACGGCAGGGGAGATCT +
Preference number: 5 (lower is better)
Translates to: RPSAEHWKAELCTRR*RDPAPCSSSRQGRS
Trigger: AGATCTCCCCTGCCGTGAAGAAGAACAGGGAGCAGGATCACGCCAGCGACGCGTACACAGCTCTGCTTTCCAGTGTTCTGCAGAGGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000535270.5
ENST00000537064.5
CDS-3UTR CAA 90 bp CCTGATGCAGTGCAAGTCACTGCCAACGAGCGCCCACAGCCTGAACAGGCCGGCGCCTCATCGGGTTCATaGAAGACACAAAAGGGGCCT +
Preference number: 5 (lower is better)
Translates to: PDAVQVTANERPQPEQAGASSGS*KTQKGP
Trigger: AGGCCCCTTTTGTGTCTTCAATGAACCCGATGAGGC...GCCGGCCTGTTCAGGCTGTGGGCGCTCGTTGGCAGTGACTTGCACTGCATCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537064.5
CDS-3UTR CAA 90 bp CACTGGGTTCTTTACCTGCTGCAGGGCCGCAGGGATGGTGATGATCTTCTGGATATGCACTGGGGCGCCTaGTACTCCCCCTGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: HWVLYLLQGRRDGDDLLDMHWGA*YSPWLS
Trigger: GGACAGCCAGGGGGAGTACAAGGCGCCCCAGTGCAT...ATCCAGAAGATCATCACCATCCCTGCGGCCCTGCAGCAGGTAAAGAACCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp CCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCACACACCTCTTCAAAGTaGGTGACTTGCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: PTRALGTRLVSEPNLREPHTSSK*VTCSTG
Trigger: GCCTGTGGAGCAAGTCACCAACTTTGAAGAGGTGTG...TGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CAA 90 bp CCAGGTGCACCAGGGCCCGGAACAGTAACGGAACCTGAGTCTCATATACGCCCTGAGTTCAGGATGCACTaGTGGGCCAGCTGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: PGAPGPGTVTEPESHIRPEFRMH*WASCSE
Trigger: CTCGCTGCAGCTGGCCCACAAGTGCATCCTGAACTC...AGGGCGTATATGAGACTCAGGTTCCGTTACTGTTCCGGGCCCTGGTGCACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACAATCCTGGTACTGGTCATaGGTGAAGCCTTCCTTGACC +
Preference number: 5 (lower is better)
Translates to: GAAGPAAATSSCGTGARQSWYWS*VKPSLT
Trigger: GGTCAAGGAAGGCTTCACCAATGACCAGTACCAGGA...TTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCTCTGCTGAGTACAGGGCGCCAAGGCTGGGCATCTGGTTGCTGCGCACAGTGTAGGACCCGATTTACCTaGCGATACGAAGCACCCTCC +
Preference number: 5 (lower is better)
Translates to: ALLSTGRQGWASGCCAQCRTRFT*RYEAPS
Trigger: GGAGGGTGCTTCGTATCGCAAGGTAAATCGGGTCCT...ACACTGTGCGCAGCAACCAGATGCCCAGCCTTGGCGCCCTGTACTCAGCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp TCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCAGGCTGGGCATCTGGTaGCTGCGCACAGTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SRAGLLSSKWEPGRTGNIRLGIW*LRTVSS
Trigger: GCTGGACACTGTGCGCAGCAACCAGATGCCCAGCCT...GATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCAGAGAGGATGGCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGGATGACCCCAGGCGCTaGAACTCAGCGATGAGCTGC +
Preference number: 5 (lower is better)
Translates to: AERMATEASGRSASPGCLDDPRR*NSAMSC
Trigger: GCAGCTCATCGCTGAGTTCAAGCGCCTGGGGTCATC...CAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGCCATCCTCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CACGGTGTCCACGTAGAAGGAGTTTTCCCGCTGGCAGATGGTGGTGAGACGCTCGATGACCCCAGGCGCTaGAACTCAGCGATGAGCTGC +
Preference number: 5 (lower is better)
Translates to: HGVHVEGVFPLADGGETLDDPRR*NSAMSC
Trigger: GCAGCTCATCGCTGAGTTCAAGCGCCTGGGGTCATC...GAGCGTCTCACCACCATCTGCCAGCGGGAAAACTCCTTCTACGTGGACACCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCACCTTGCACACGTATTaGATGAACTCCAGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: APGSMALPVQDPIVDLVSTLHTY*MNSRAG
Trigger: CCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGT...GCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCACCTGGTTTGTGATGTaGGTGTCCAGGGACAGCACC +
Preference number: 5 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRTWFVM*VSRDST
Trigger: GGTGCTGTCCCTGGACACCAACATCACAAACCAGGT...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCTGGGCATCTGGTTGCTGCGCACAGTGTCCAGCACAAAGACGGATGCCCTGCGACCTGGTTTGTGATGTaGGTGTCCAGGGACAGCACC +
Preference number: 5 (lower is better)
Translates to: AGHLVAAHSVQHKDGCPATWFVM*VSRDST
Trigger: GGTGCTGTCCCTGGACACCAACATCACAAACCAGGT...CGCAGGGCATCCGTCTTTGTGCTGGACACTGTGCGCAGCAACCAGATGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GGTGTCCAGGGACAGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTCACGGGGATGTGGCCTaGGCATCAGGAGGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: GVQGQHLAHVFDELQGRVHGDVA*ASGGLA
Trigger: TGCCAGGCCTCCTGATGCCAAGGCCACATCCCCGTG...AACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCTGTCCCTGGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS TCA 90 bp CAGAGCAAGACCCTGGAAAGCAGAGCTGTGTACGCGTCGCTGGCGTaGTCCTGCTCCCTGTTCTTCTTCACGGCAGGGGAGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: QSKTLESRAVYASLA*SCSLFFFTAGEISF
Trigger: GAAGGAGATCTCCCCTGCCGTGAAGAAGAACAGGGAGCAGGATCACGCCAGCGACGCGTACACAGCTCTGCTTTCCAGGGTCTTGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS GCA 90 bp TCTCCCAAAGTTCAGAAGCAGCAGCCTCATGTTGGCCCTTATTCCTaGCCCGCCCCTCCGCCCGTCTCTGGCAGAAAAGACGGTCATACC +
Preference number: 5 (lower is better)
Translates to: SPKVQKQQPHVGPYS*PAPPPVSGRKDGHT
Trigger: GGTATGACCGTCTTTTCTGCCAGAGACGGGCGGAGGGGCGGGGCAGGAATAAGGGCCAACATGAGGCTGCTGCTTCTGAACTTTGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS CCA 90 bp GCGCTTGAACTCAGCGATGAGCCTGTGGAGCAAGTTGAGAGTCCGTaGTGGAGACGCCACAGTCATGGAGAGCCAGAGGGCACCCAGAAA +
Preference number: 5 (lower is better)
Translates to: ALELSDEPVEQVESP*WRRHSHGEPEGTQK
Trigger: TTTCTGGGTGCCCTCTGGCTCTCCATGACTGTGGCGTCTCCACCACGGACTCTCAACTTGCTCCACAGGCTCATCGCTGAGTTCAAGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS-3UTR CAA 90 bp AAGGTGATCATTCCGGGAAGGGCTCCGACCGCCCCCTCGGCCTCCTGGGAGAGCGGACAGTCTCCACTTTaGCAATTTTGCCCTGAAACT +
Preference number: 5 (lower is better)
Translates to: KVIIPGRAPTAPSASWESGQSPL*QFCPET
Trigger: AGTTTCAGGGCAAAATTGCAAAAGTGGAGACTGTCC...GCTCTCCCAGGAGGCCGAGGGGGCGGTCGGAGCCCTTCCCGGAATGATCACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GGCCTGCACCATCAGCAAGGCCTCACACAGAGTGCCAGAGCCCTTCCGCAGCACCGCATGTCCACAATGTaGTCCAACTGGTCAGCTATC +
Preference number: 5 (lower is better)
Translates to: GLHHQQGLTQSARALPQHRMSTM*SNWSAI
Trigger: GATAGCTGACCAGTTGGACAACATTGTGGACATGCG...GTGCTGCGGAAGGGCTCTGGCACTCTGTGTGAGGCCTTGCTGATGGTGCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GGGCACTCGCAGCCTCGCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCACCTTCATATTCTGGCTaGGGGGTGAACTCAAAATCT +
Preference number: 5 (lower is better)
Translates to: GHSQPRSRPASSGALARPPSYSG*GVNSKS
Trigger: AGATTTTGAGTTCACCCCCAAGCCAGAATATGAAGG...TGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGCGAGGCTGCGAGTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGTTGGGGAAGATGATGTaGGCGTGGAAGGCCTGCACC +
Preference number: 5 (lower is better)
Translates to: DELQGRVIEQQVGTGEDRLGKMM*AWKACT
Trigger: GGTGCAGGCCTTCCACGCCAACATCATCTTCCCCAA...CCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GGGGGAACTTCTCTGACTCCAGCTGGTGCTGGATCCGATGGTATTCGCTGCGACTTGGTCAGGATGATGTaGGGGTACATGGCCCCCACG +
Preference number: 5 (lower is better)
Translates to: GGTSLTPAGAGSDGIRCDLVRMM*GYMAPT
Trigger: CGTGGGGGCCATGTACCCCAACATCATCCTGACCAA...GTCGCAGCGAATACCATCGGATCCAGCACCAGCTGGAGTCAGAGAAGTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp CCCACCAGGGCCTTGGGAACCCGTCTCGTCTCAGAGCCCAATCTCAGGGAGCCAAGACGCTCTTCCACCTaGGTGATGTGGATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: PTRALGTRLVSEPNLREPRRSST*VMWIFL
Trigger: CAAGAAGATCCACATCACCAAGGTGGAAGAGCGTCT...TGGCTCCCTGAGATTGGGCTCTGAGACGAGACGGGTTCCCAAGGCCCTGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CAA 90 bp ACAAGACAGTTGTCATCAGCCTCCTTTCCACCCAGGTCAGGGCGGGCTGTAGGGAGCACCTCCATGTTCTaGCAGCGCTTCACCTCAGCC +
Preference number: 5 (lower is better)
Translates to: TRQLSSASFPPRSGRAVGSTSMF*QRFTSA
Trigger: GGCTGAGGTGAAGCGCTGCAAGAACATGGAGGTGCT...CCCTACAGCCCGCCCTGACCTGGGTGGAAAGGAGGCTGATGACAACTGTCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GGCGCTGCCGGGCCTGCAGCTGCCACTTCTTCTTGTGGAACCGGAGCCAGACAATTTTCTGGGAAGCTGTaGGGCAGGACGCACCATATA +
Preference number: 5 (lower is better)
Translates to: GAAGPAAATSSCGTGARQFSGKL*GRTHHI
Trigger: TATATGGTGCGTCCTGCCCAACAGCTTCCCAGAAAA...TTGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCTGCAGGCCCGGCAGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGAGTTCCCCGCGGCGTTaGACCTCAAAGCCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVSSPRR*TSKPLS
Trigger: GCTCAAGGGCTTTGAGGTCAAACGCCGCGGGGAACT...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCAGTTCCCCGCGGCGTTaGACCTCAAAGCCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: QGRVIEQQVGTGEDRKHLSSPRR*TSKPLS
Trigger: GCTCAAGGGCTTTGAGGTCAAACGCCGCGGGGAACT...GAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGGGCATGTTGGCTGCCTaGCTGTACAGCACGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVGMLAA*LYSTSS
Trigger: GCTGGACGTGCTGTACAGCAAGGCAGCCAACATGCC...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GATCATGCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTTCAGAGTCAGGCATGTaGGCTGCCTTGCTGTACAGC +
Preference number: 5 (lower is better)
Translates to: DHAPGSMALPVQDPIVDLSESGM*AALLYS
Trigger: GCTGTACAGCAAGGCAGCCAACATGCCTGACTCTGA...AAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGCATGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCCCACCTCCACGGCCGCCGAGAGCTTCTTTTTCCACACCTTGTGGAGCCCTTTCACCGTGGGCTCTGCTaGGAAAATGGCAAGTGGGAT +
Preference number: 5 (lower is better)
Translates to: AHLHGRRELLFPHLVEPFHRGLC*ENGKWD
Trigger: ATCCCACTTGCCATTTTCCAAGCAGAGCCCACGGTG...AAAGGGCTCCACAAGGTGTGGAAAAAGAAGCTCTCGGCGGCCGTGGAGGTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp TTTCCTGAGGCTGATAGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCATCCCGAAGAGCGCTTaGTGGGCCTGTGCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: FPEADRGFPLDPAPNKQGIPKSA*WACAWW
Trigger: CCACCACGCACAGGCCCACAAAGCGCTCTTCGGGAT...GCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCTATCAGCCTCAGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCACCTTGCACACGTATTaGATGAACTCCAGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLTLHTY*MNSRAG
Trigger: CCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGT...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTAGCCCCACCAGGGCCTaGGGAACCCGTCTCGTCTCA +
Preference number: 5 (lower is better)
Translates to: RFSRVRVWIPGETSPQTASPTRA*GTRLVS
Trigger: TGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGGCT...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS TCA 90 bp ACCGCAAATCCATCTTATCCGTCCACTGACTCCGTTCCAGGCGCTTaGGTGCCGAAACTGAGGAAGTGGCGCCATCATCCCTGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: TANPSYPSTDSVPGA*VPKLRKWRHHPCWP
Trigger: AGGCCAGCAGGGATGATGGCGCCACTTCCTCAGTTTCGGCACTCAAGCGCCTGGAACGGAGTCAGTGGACGGATAAGATGGATTTGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000535270.5
ENST00000537064.5
ENST00000539357.1
ENST00000672742.1
CDS TCA 90 bp CTCTGCAGAACACTGGAAAGCAGAGCTGTGTACGCGTCGCTGGCGTaGTCCTGCTCCCTGTTCTTCTTCACGGCAGGGGAGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LCRTLESRAVYASLA*SCSLFFFTAGEISF
Trigger: GAAGGAGATCTCCCCTGCCGTGAAGAAGAACAGGGAGCAGGATCACGCCAGCGACGCGTACACAGCTCTGCTTTCCAGTGTTCTGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000535270.5
ENST00000537064.5
CDS TCA 90 bp TGGGGGCTGCGCAGCCCTGGGCTCTGGGCTTACCTGAAACAATCATaGGGAAGTAGTTCTGGCAGGAGGCTGCCTGTGGCAAAAACTGCA +
Preference number: 5 (lower is better)
Translates to: WGLRSPGLWAYLKQS*GSSSGRRLPVAKTA
Trigger: TGCAGTTTTTGCCACAGGCAGCCTCCTGCCAGAACTACTTCCTCATGATTGTTTCAGGTAAGCCCAGAGCCCAGGGCTGCGCAGCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000416953.2
CDS TCA 90 bp GTCTGCCTCCTTCCGCTAGAACGAAGCACCCACAAGGCCAGCTCTTaGCCCAAGGCAGGTGCTCAACCAGTGTGGACAGAACAGTCCATC +
Preference number: 5 (lower is better)
Translates to: VCLLPLERSTHKASS*PKAGAQPVWTEQSI
Trigger: GATGGACTGTTCTGTCCACACTGGTTGAGCACCTGCCTTGGGTCAAGAGCTGGCCTTGTGGGTGCTTCGTTCTAGCGGAAGGAGGCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS TCA 90 bp TCCCCCACCAGAAAGTTAGGCCTCACAGACCAGCCAGGGGGCAGCTaGCCTGACCCAGGGCTTTATCTTCAGCTACTGAACGTGCACACA +
Preference number: 5 (lower is better)
Translates to: SPTRKLGLTDQPGGS*PDPGLYLQLLNVHT
Trigger: TGTGTGCACGTTCAGTAGCTGAAGATAAAGCCCTGGGTCAGGTCAGCTGCCCCCTGGCTGGTCTGTGAGGCCTAACTTTCTGGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544692.5
CDS GCA 90 bp GCTCTTGAGCCATTTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTaGTTGGAAAATGGCAAGTGGGATGGCCCTCTCCGTGACAGGGGA +
Preference number: 5 (lower is better)
Translates to: ALEPFPEKVLPHRGL*LENGKWDGPLRDRG
Trigger: TCCCCTGTCACGGAGAGGGCCATCCCACTTGCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATGGCTCAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000535270.5
ENST00000536445.5
CDS GCA 90 bp GCTAGAACGAAGCACCCACAAGGCCAGCTCTTGACCCAAGGCAGGTaGTCAACCAGTGTGGACAGAACAGTCCATCAGGCTCAGGGCATG +
Preference number: 5 (lower is better)
Translates to: ARTKHPQGQLLTQGR*STSVDRTVHQAQGM
Trigger: CATGCCCTGAGCCTGATGGACTGTTCTGTCCACACTGGTTGAGCACCTGCCTTGGGTCAAGAGCTGGCCTTGTGGGTGCTTCGTTCTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS-3UTR CAA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCTTTGCTCCAGGCTTATaGAAGTCACAGGCAGCACAG +
Preference number: 5 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRFAPGL*KSQAAQ
Trigger: CTGTGCTGCCTGTGACTTCAATAAGCCTGGAGCAAA...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCAGACGCTCTTCCACCTaGGTGATGTGGATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLRRSST*VMWIFL
Trigger: CAAGAAGATCCACATCACCAAGGTGGAAGAGCGTCT...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp CTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGGATACTCCCTGGTTGAGTTCAGGATGCACTaGTGGGCCAGCTGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: LCGPVRGGTGRYGGYSLVEFRMH*WASCSE
Trigger: CTCGCTGCAGCTGGCCCACAAGTGCATCCTGAACTC...AACCAGGGAGTATCCGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCACAAATGGCCAGTCAAATCCTGGTACTGGTCATaGGTGAAGCCTTCCTTGACC +
Preference number: 5 (lower is better)
Translates to: LHAQTVDCCPGLHKWPVKSWYWS*VKPSLT
Trigger: GGTCAAGGAAGGCTTCACCAATGACCAGTACCAGGA...TTTGACTGGCCATTTGTGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp CTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGGATACTCCCTGGTTAGTTCCCCGCGGCGTTaGACCTCAAAGCCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: LCGPVRGGTGRYGGYSLVSSPRR*TSKPLS
Trigger: GCTCAAGGGCTTTGAGGTCAAACGCCGCGGGGAACT...AACCAGGGAGTATCCGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTTCAGAGTCAGGCATGTaGGCTGCCTTGCTGTACAGC +
Preference number: 5 (lower is better)
Translates to: ATEAWKSIHCVRNGAQGTSESGM*AALLYS
Trigger: GCTGTACAGCAAGGCAGCCAACATGCCTGACTCTGA...AGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GGGGGAACTTCTCTGACTCCAGCTGGTGCTGGATCCGATGGTATTCGCTGCGACCACCGTGGGCTCTGCTaGGAAAATGGCAAGTGGGAT +
Preference number: 5 (lower is better)
Translates to: GGTSLTPAGAGSDGIRCDHRGLC*ENGKWD
Trigger: ATCCCACTTGCCATTTTCCAAGCAGAGCCCACGGTG...GTCGCAGCGAATACCATCGGATCCAGCACCAGCTGGAGTCAGAGAAGTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GCAGAGAGGATGGCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGCACCGTGGGCTCTGCTaGGAAAATGGCAAGTGGGAT +
Preference number: 5 (lower is better)
Translates to: AERMATEASGRSASPGCLHRGLC*ENGKWD
Trigger: ATCCCACTTGCCATTTTCCAAGCAGAGCCCACGGTG...CAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGCCATCCTCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCCATGTCAGGAGCACTaGGCCTCGGACTGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: LQGRVIEQQVGTGEDRKHPCQEH*ASDCLL
Trigger: CAGAAGACAGTCCGAGGCCAAGTGCTCCTGACATGG...ATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTAGGACCCGATTTACCTaGCGATACGAAGCACCCTCC +
Preference number: 5 (lower is better)
Translates to: ATEAWKSIHCVRNGAQGTRTRFT*RYEAPS
Trigger: GGAGGGTGCTTCGTATCGCAAGGTAAATCGGGTCCT...AGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GGCACTGGCAGCCTGACCACCCGTGATCATGTCCTCCAGGGAGGCCTGCTGGATTCAGCGTTGATCTCGTaGATGTGTTCCTGGTACATG +
Preference number: 5 (lower is better)
Translates to: GTGSLTTRDHVLQGGLLDSALIS*MCSWYM
Trigger: CATGTACCAGGAACACATCAACGAGATCAACGCTGA...ATCCAGCAGGCCTCCCTGGAGGACATGATCACGGGTGGTCAGGCTGCCAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGATCCCGAAGAGCGCTTaGTGGGCCTGTGCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: HVFDELQGRVIEQQVGTGIPKSA*WACAWW
Trigger: CCACCACGCACAGGCCCACAAAGCGCTCTTCGGGAT...CCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GGCCTGCACCATCAGCAAGGCCTCACACAGAGTGCCAGAGCCCTTCCGCAGCACTCCATGACAAGACAGTaGTCATCAGCCTCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: GLHHQQGLTQSARALPQHSMTRQ*SSASFP
Trigger: TGGAAAGGAGGCTGATGACAACTGTCTTGTCATGGA...GTGCTGCGGAAGGGCTCTGGCACTCTGTGTGAGGCCTTGCTGATGGTGCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCTCCAGGGCAGGGTTATaGAGCAGCAAGTGGGAACCG +
Preference number: 5 (lower is better)
Translates to: VQEATEAWKSIHCVRNGASRAGL*SSKWEP
Trigger: CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGA...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTCCAGGGCAGGGTTATaGAGCAGCAAGTGGGAACCG +
Preference number: 5 (lower is better)
Translates to: QGRVIEQQVGTGEDRKHLSRAGL*SSKWEP
Trigger: CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGA...GAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS GCA 90 bp TGCTGGGCAGGCTCCGCCCGATCTGATTTTCCCTGTCTCCCTTCTTaGGATACCATGGCACAGGAGCCACATCTACTAACCATGAGTCCC +
Preference number: 5 (lower is better)
Translates to: CWAGSARSDFPCLPS*DTMAQEPHLLTMSP
Trigger: GGGACTCATGGTTAGTAGATGTGGCTCCTGTGCCATGGTATCGCAAGAAGGGAGACAGGGAAAATCAGATCGGGCGGAGCCTGCCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416953.2
ENST00000544692.5
CDS GCA 90 bp AGACACATTCGTGGGCCCATCAGTAAGCCTCGAGCCCCTGCTGTGTaGAGCCAGCCCTCGGTTATGAGTAAAATGCACGACCTCATCCCA +
Preference number: 5 (lower is better)
Translates to: RHIRGPISKPRAPAV*SQPSVMSKMHDLIP
Trigger: TGGGATGAGGTCGTGCATTTTACTCATAACCGAGGGCTGGCTGCACACAGCAGGGGCTCGAGGCTTACTGATGGGCCCACGAATGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS CCA 90 bp CTTGAACTCAGCGATGAGCCTGTGGAGCAAGTTGAGAGTCCGTGGTaGAGACGCCACAGTCATGGAGAGCCAGAGGGCACCCAGAAAATC +
Preference number: 5 (lower is better)
Translates to: LELSDEPVEQVESPW*RRHSHGEPEGTQKI
Trigger: GATTTTCTGGGTGCCCTCTGGCTCTCCATGACTGTGGCGTCTCCACCACGGACTCTCAACTTGCTCCACAGGCTCATCGCTGAGTTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS CCA 90 bp AGACGCTCTGTGTGTGGATTCCCACTCGAAAGGGGAGGGTACAGCTaGAGGTCGGAACGGCTTGGTTGCTCCCATTCCTGGACTAACTCA +
Preference number: 5 (lower is better)
Translates to: RRSVCGFPLERGGYS*RSERLGCSHSWTNS
Trigger: TGAGTTAGTCCAGGAATGGGAGCAACCAAGCCGTTCCGACCTCCAGCTGTACCCTCCCCTTTCGAGTGGGAATCCACACACAGAGCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS CCA 90 bp GGCCTCCACAAATGGCCTGGGTTGGAAAGAGGACAGACAAGCAAGTaGGCAGGTCAGGCTCTAATGCCCCTTTCTCCATTCCTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: GLHKWPGLERGQTSK*AGQALMPLSPFLPQ
Trigger: CTGAGGGAGGAATGGAGAAAGGGGCATTAGAGCCTGACCTGCCCACTTGCTTGTCTGTCCTCTTTCCAACCCAGGCCATTTGTGGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS-3UTR CAA 90 bp GATCCCGAAGAGCGCTTTGTGGGCCTGTGCGTGGTGGTACAGGTAGATATGGCGTCAGCATCAGGAAACTaGAGGGGCAGTTTGGTCGTC +
Preference number: 5 (lower is better)
Translates to: DPEERFVGLCVVVQVDMASASGN*RGSLVV
Trigger: GACGACCAAACTGCCCCTCAAGTTTCCTGATGCTGA...CGCCATATCTACCTGTACCACCACGCACAGGCCCACAAAGCGCTCTTCGGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCGCCTCATCGGGTTCATaGAAGACACAAAAGGGGCCT +
Preference number: 5 (lower is better)
Translates to: APVRLWGQPISPCKQVRLASSGS*KTQKGP
Trigger: AGGCCCCTTTTGTGTCTTCAATGAACCCGATGAGGC...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000320574.10
CDS-3UTR CAA 90 bp AAGACCTGGGTGTGGATGGTGAGGGCGAAGTCTCCCGCGCAGCTGCAGTACACAAGACGCTCTTCCACCTaGGTGATGTGGATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: KTWVWMVRAKSPAQLQYTRRSST*VMWIFL
Trigger: CAAGAAGATCCACATCACCAAGGTGGAAGAGCGTCT...TGTGTACTGCAGCTGCGCGGGAGACTTCGCCCTCACCATCCACACCCAGGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCTTCTTTTTCCACACCTaGTGGAGCCCTTTGAACTCG +
Preference number: 5 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLFFFHT*WSPLNS
Trigger: CGAGTTCAAAGGGCTCCACAAGGTGTGGAAAAAGAA...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GGAAGCCTATCTCCTGCTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCATTGGTGAAGCCTTCCTaGACCATGATGTTCAACATG +
Preference number: 5 (lower is better)
Translates to: GSLSPAACSDRGLLPGPPLVKPS*TMMFNM
Trigger: CATGTTGAACATCATGGTCAAGGAAGGCTTCACCAA...TGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAGCAGGAGATAGGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp CACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGTACGCTGTTCTTGCCTTCTTCCTaGGAGGCTGGAAGAATCATG +
Preference number: 5 (lower is better)
Translates to: HCASARPSCSGTRPRCTLFLPSS*EAGRIM
Trigger: CATGATTCTTCCAGCCTCCAAGGAAGAAGGCAAGAA...CAGCGTACATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCCACACAGATAGGCACTTGACCTCAAAGCCCTaGAGCTCAGCCAGAGAACCG +
Preference number: 5 (lower is better)
Translates to: ALPVQDPIVDLVSHTDRHLTSKP*SSAREP
Trigger: CGGTTCTCTGGCTGAGCTCAAGGGCTTTGAGGTCAA...GTGCCTATCTGTGTGGCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp TATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGTCCAGCGTGCTGCCCTaGAGGAAGGCCTCAAACACC +
Preference number: 5 (lower is better)
Translates to: YLMNSRAGLLSSKWEPGRSSVLP*RKASNT
Trigger: GGTGTTTGAGGCCTTCCTCAAGGGCAGCACGCTGGA...CCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp TGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCCAGCCTTCTCCAGCAGTTTTTaGTGCAGCCAGTCGGGGTGT +
Preference number: 5 (lower is better)
Translates to: CEAVGPAHFSMQTGETPAFSSSF*CSQSGC
Trigger: ACACCCCGACTGGCTGCACAAAAAACTGCTGGAGAA...GGCTGGAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCTCAGCGTTGATCTCGTaGATGTGTTCCTGGTACATG +
Preference number: 5 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRSALIS*MCSWYM
Trigger: CATGTACCAGGAACACATCAACGAGATCAACGCTGA...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCGCTGACAGCTCAGCGTaGATCTCGTTGATGTGTTCC +
Preference number: 5 (lower is better)
Translates to: APVRLWGQPISPCKQVRLADSSA*ISLMCS
Trigger: GGAACACATCAACGAGATCAACGCTGAGCTGTCAGC...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCAGAGAGGATGGCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGCTCACCAGCTGTTTATaGACCACACACACACAGCCC +
Preference number: 5 (lower is better)
Translates to: AERMATEASGRSASPGCLLTSCL*TTHTQP
Trigger: GGGCTGTGTGTGTGTGGTCAATAAACAGCTGGTGAG...CAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGCCATCCTCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCTCCATGACAAGACAGTaGTCATCAGCCTCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLSMTRQ*SSASFP
Trigger: TGGAAAGGAGGCTGATGACAACTGTCTTGTCATGGA...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CACTGCGCCTCAGCCCGTCCTTCATGCAGTGGTACACGGCCACGATGTACGCTGTCCATGACAAGACAGTaGTCATCAGCCTCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: HCASARPSCSGTRPRCTLSMTRQ*SSASFP
Trigger: TGGAAAGGAGGCTGATGACAACTGTCTTGTCATGGA...CAGCGTACATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCCCACCTCCACGGCCGCCGAGAGCTTCTTTTTCCACACCTTGTGGAGCCCTTTTGCTTTCTGGGAGTCTaGCAGTCCACAGTGAATACG +
Preference number: 5 (lower is better)
Translates to: AHLHGRRELLFPHLVEPFCFLGV*QSTVNT
Trigger: CGTATTCACTGTGGACTGCAAGACTCCCAGAAAGCA...AAAGGGCTCCACAAGGTGTGGAAAAAGAAGCTCTCGGCGGCCGTGGAGGTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp AACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACACCTGGTTTGTGATGTaGGTGTCCAGGGACAGCACC +
Preference number: 5 (lower is better)
Translates to: NSRAGLLSSKWEPGRTGNTWFVM*VSRDST
Trigger: GGTGCTGTCCCTGGACACCAACATCACAAACCAGGT...GTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp ACTCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTACCTGGTTTGTGATGTaGGTGTCCAGGGACAGCACC +
Preference number: 5 (lower is better)
Translates to: TRRHPPGEAGLGSAYSPGTWFVM*VSRDST
Trigger: GGTGCTGTCCCTGGACACCAACATCACAAACCAGGT...ACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS GCA 90 bp GACATGGGAAGCGCCCCTGCACCACGCAACGCCCTCCCTCTCAAATaGTGCCCAGTTACTCATAGAGAAGACACAGACTCACCAGTCAAA +
Preference number: 5 (lower is better)
Translates to: DMGSAPAPRNALPLK*CPVTHREDTDSPVK
Trigger: TTTGACTGGTGAGTCTGTGTCTTCTCTATGAGTAACTGGGCAGCATTTGAGAGGGAGGGCGTTGCGTGGTGCAGGGGCGCTTCCCATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS-3UTR CAA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCTCCGTTCCAGGCGCTaGAGTGCCGAAACTGAGGAA +
Preference number: 5 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKILRSRR*SAETEE
Trigger: TTCCTCAGTTTCGGCACTCAAGCGCCTGGAACGGAG...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CAA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCAACTTGAGGGGCAGTTaGGTCGTCTCAATGTCAAAT +
Preference number: 5 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLNLRGS*VVSMSN
Trigger: ATTTGACATTGAGACGACCAAACTGCCCCTCAAGTT...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp CCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGTGTTCCTGGTCAGCATCAGGAAACTaGAGGGGCAGTTTGGTCGTC +
Preference number: 5 (lower is better)
Translates to: PSMSGADSSALISLMCSWSASGN*RGSLVV
Trigger: GACGACCAAACTGCCCCTCAAGTTTCCTGATGCTGA...CCAGGAACACATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp CCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCAATGTTCCGGAATAACCATGATGGTGGGTTaGGTCTCCTGGACGTGTTCA +
Preference number: 5 (lower is better)
Translates to: PGSPGGTTCRSAGQCSGITMMVG*VSWTCS
Trigger: TGAACACGTCCAGGAGACCAAACCCACCATCATGGT...TATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp ACTCGCCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTCCTGCTCTTGCTTGTaGGGGAAGATGATGTTGGCG +
Preference number: 5 (lower is better)
Translates to: TRRHPPGEAGLGSAYSPGSCSCL*GKMMLA
Trigger: CGCCAACATCATCTTCCCCAACAAGCAAGAGCAGGA...ACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGGCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp TCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCCACACCTCTTCAAAGTaGGTGACTTGCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: SRAGLLSSKWEPGRTGNIHTSSK*VTCSTG
Trigger: GCCTGTGGAGCAAGTCACCAACTTTGAAGAGGTGTG...GATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCCACACAGATAGGCACCACACCTCTTCAAAGTaGGTGACTTGCTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: ALPVQDPIVDLVSHTDRHHTSSK*VTCSTG
Trigger: GCCTGTGGAGCAAGTCACCAACTTTGAAGAGGTGTG...GTGCCTATCTGTGTGGCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp CACAGTGACAGGGGCTGCTGGGTGAGGCAGCTTTACGAGGCCGAAGTCCTCCATTTCAGGGAGGCAAGCTaGCTCTTAATCTCATCACAC +
Preference number: 5 (lower is better)
Translates to: HSDRGCWVRQLYEAEVLHFREAS*LLISSH
Trigger: GTGTGATGAGATTAAGAGCAAGCTTGCCTCCCTGAA...ATGGAGGACTTCGGCCTCGTAAAGCTGCCTCACCCAGCAGCCCCTGTCACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACTTGGTCAGGATGATGTaGGGGTACATGGCCCCCACG +
Preference number: 5 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNLVRMM*GYMAPT
Trigger: CGTGGGGGCCATGTACCCCAACATCATCCTGACCAA...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGAGCACCTCCATGTTCTaGCAGCGCTTCACCTCAGCC +
Preference number: 5 (lower is better)
Translates to: VFDELQGRVIEQQVGTGESTSMF*QRFTSA
Trigger: GGCTGAGGTGAAGCGCTGCAAGAACATGGAGGTGCT...CTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCAGAGAACCGTCTTCATaGAACACAGCATACCTCTTC +
Preference number: 5 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLREPSS*NTAYLF
Trigger: GAAGAGGTATGCTGTGTTCAATGAAGACGGTTCTCT...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGTTGACCTCAAAGCCCTaGAGCTCAGCCAGAGAACCG +
Preference number: 5 (lower is better)
Translates to: AGLLSSKWEPGRTGNISELTSKP*SSAREP
Trigger: CGGTTCTCTGGCTGAGCTCAAGGGCTTTGAGGTCAA...CTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCGCCTCAAACACCGAGGATaGGAAGATCTTAATCAGCTG +
Preference number: 5 (lower is better)
Translates to: LEKHSLREKRRPGHSQPRLKHRG*EDLNQL
Trigger: CAGCTGATTAAGATCTTCCAATCCTCGGTGTTTGAG...GCGAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCTCTGCTGAGTACAGGGCGCCAAGGCTGGGCATCTGGTTGCTGCGCACAGTGTCTCAAACACCGAGGATaGGAAGATCTTAATCAGCTG +
Preference number: 5 (lower is better)
Translates to: ALLSTGRQGWASGCCAQCLKHRG*EDLNQL
Trigger: CAGCTGATTAAGATCTTCCAATCCTCGGTGTTTGAG...ACACTGTGCGCAGCAACCAGATGCCCAGCCTTGGCGCCCTGTACTCAGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCTCCAGCGTGCTGCCCTaGAGGAAGGCCTCAAACACC +
Preference number: 5 (lower is better)
Translates to: AHVFDELQGRVIEQQVGTSSVLP*RKASNT
Trigger: GGTGTTTGAGGCCTTCCTCAAGGGCAGCACGCTGGA...GGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGCACCGTGGGCTCTGCTaGGAAAATGGCAAGTGGGAT +
Preference number: 5 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQHRGLC*ENGKWD
Trigger: ATCCCACTTGCCATTTTCCAAGCAGAGCCCACGGTG...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCTCACGGCCTGCTTCTTCAGGTGCTCTGGCGAGGCCAGGGCCACATCCTGCTCAGTCCCAATCCAGAATaGCTCGAATATCAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: AHGLLLQVLWRGQGHILLSPNPE*LEYQSL
Trigger: AAGACTTTGATATTCGAGCAATTCTGGATTGGGACT...GAGCAGGATGTGGCCCTGGCCTCGCCAGAGCACCTGAAGAAGCAGGCCGTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp ATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGATTCTCCAGCAGTTTTTaGTGCAGCCAGTCGGGGTGT +
Preference number: 5 (lower is better)
Translates to: MNSRAGLLSSKWEPGRTGFSSSF*CSQSGC
Trigger: ACACCCCGACTGGCTGCACAAAAAACTGCTGGAGAA...TCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GAGCCATTTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTGCTTGGAAAATGGCAGGACCCGATTTACCTaGCGATACGAAGCACCCTCC +
Preference number: 5 (lower is better)
Translates to: EPFPEKVLPHRGLCLENGRTRFT*RYEAPS
Trigger: GGAGGGTGCTTCGTATCGCAAGGTAAATCGGGTCCT...GCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp ACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGATCCCGAAGAGCGCTTaGTGGGCCTGTGCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: TLHTYLMNSRAGLLSSKWIPKSA*WACAWW
Trigger: CCACCACGCACAGGCCCACAAAGCGCTCTTCGGGAT...CCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CCAGGTGCACCAGGGCCCGGAACAGTAACGGAACCTGAGTCTCATATACGCCCTTGCTTTCTGGGAGTCTaGCAGTCCACAGTGAATACG +
Preference number: 5 (lower is better)
Translates to: PGAPGPGTVTEPESHIRPCFLGV*QSTVNT
Trigger: CGTATTCACTGTGGACTGCAAGACTCCCAGAAAGCA...AGGGCGTATATGAGACTCAGGTTCCGTTACTGTTCCGGGCCCTGGTGCACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCAGTAAATCCTCCACGTaGGATTCCTCCGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: QGRVIEQQVGTGEDRKHLSKSST*DSSASS
Trigger: GGAAGAGGCGGAGGAATCCAACGTGGAGGATTTACT...GAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACTCCAGGGCAGGGTTATaGAGCAGCAAGTGGGAACCG +
Preference number: 5 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNSRAGL*SSKWEP
Trigger: CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGA...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCACCTTGCACACGTATTaGATGAACTCCAGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: QGRVIEQQVGTGEDRKHLTLHTY*MNSRAG
Trigger: CCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGT...GAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGTGTTCCTGGACCTTGCACACGTATTaGATGAACTCCAGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: PSMSGADSSALISLMCSWTLHTY*MNSRAG
Trigger: CCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGT...CCAGGAACACATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp AACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACACCTTGCACACGTATTaGATGAACTCCAGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: NSRAGLLSSKWEPGRTGNTLHTY*MNSRAG
Trigger: CCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGT...GTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GGGGGAACTTCTCTGACTCCAGCTGGTGCTGGATCCGATGGTATTCGCTGCGACTCCAGGGACAGCACCTaGCACACGTATTTGATGAAC +
Preference number: 5 (lower is better)
Translates to: GGTSLTPAGAGSDGIRCDSRDST*HTYLMN
Trigger: GTTCATCAAATACGTGTGCAAGGTGCTGTCCCTGGA...GTCGCAGCGAATACCATCGGATCCAGCACCAGCTGGAGTCAGAGAAGTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GCGCCGGGCTCCATGGCGCTGCCAGTCCAGGACCCCATAGTTGATCTTGTCAGCATGTCTACATGTTCCTaGCTGAGTAACACACAGAAG +
Preference number: 5 (lower is better)
Translates to: APGSMALPVQDPIVDLVSMSTCS*LSNTQK
Trigger: CTTCTGTGTGTTACTCAGCAAGGAACATGTAGACAT...GCTGACAAGATCAACTATGGGGTCCTGGACTGGCAGCGCCATGGAGCCCGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS TCA 90 bp TTCAGCCGCTCAAAACCAAACCGCAAATCCATCTTATCCGTCCACTaGCTCCGTTCCAGGCGCTTGAGTGCCGAAACTGAGGAAGTGGCG +
Preference number: 5 (lower is better)
Translates to: FSRSKPNRKSILSVH*LRSRRLSAETEEVA
Trigger: CGCCACTTCCTCAGTTTCGGCACTCAAGCGCCTGGAACGGAGTCAGTGGACGGATAAGATGGATTTGCGGTTTGGTTTTGAGCGGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320574.10
ENST00000535270.5
ENST00000537064.5
ENST00000539357.1
ENST00000539618.1
ENST00000672742.1
CDS TCA 90 bp GGTGAAGTCCATCAAATCAGGATTCATCCCGAGTTACAACACCTCTaGGGCCTGCAAGAGGGCTACGCCCCAGCAATTACCCCACGGATC +
Preference number: 5 (lower is better)
Translates to: GEVHQIRIHPELQHL*GLQEGYAPAITPRI
Trigger: GATCCGTGGGGTAATTGCTGGGGCGTAGCCCTCTTGCAGGCCTCAGAGGTGTTGTAACTCGGGATGAATCCTGATTTGATGGACTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS TCA 90 bp GCTCACCCTGGACTGTGCTCCTCTAGGCCATGCCCTTCTCTAGCCTaGGACGCAGAAGGCTGCAATTTCAAGAGCTCTCTAATATGCCTG +
Preference number: 5 (lower is better)
Translates to: AHPGLCSSRPCPSLA*DAEGCNFKSSLICL
Trigger: CAGGCATATTAGAGAGCTCTTGAAATTGCAGCCTTCTGCGTCTCAGGCTAGAGAAGGGCATGGCCTAGAGGAGCACAGTCCAGGGTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536445.5
CDS-3UTR CAA 90 bp GCTCCTGTGAGGCTGTGGGGCCAGCCCATTTCTCCATGCAAACAGGTGAGACTCAAGTCCAGATCCTCTTaGGGGACAGTCTCCACTTTT +
Preference number: 5 (lower is better)
Translates to: APVRLWGQPISPCKQVRLKSRSS*GTVSTF
Trigger: AAAAGTGGAGACTGTCCCCAAAGAGGATCTGGACTT...GAGTCTCACCTGTTTGCATGGAGAAATGGGCTGGCCCCACAGCCTCACAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CAA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGTCAGCATCAGGAAACTaGAGGGGCAGTTTGGTCGTC +
Preference number: 5 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQSASGN*RGSLVV
Trigger: GACGACCAAACTGCCCCTCAAGTTTCCTGATGCTGA...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CAA 90 bp ACAAGACAGTTGTCATCAGCCTCCTTTCCACCCAGGTCAGGGCGGGCTGTAGGGTTCAAAGTTGGTGACTaGCTCCACAGGCACTTTCTC +
Preference number: 5 (lower is better)
Translates to: TRQLSSASFPPRSGRAVGFKVGD*LHRHFL
Trigger: GAGAAAGTGCCTGTGGAGCAAGTCACCAACTTTGAA...CCCTACAGCCCGCCCTGACCTGGGTGGAAAGGAGGCTGATGACAACTGTCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GCGATGGCCTCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCATTCAGGGAGGCAAGCTaGCTCTTAATCTCATCACAC +
Preference number: 5 (lower is better)
Translates to: AMASDSRWQGQTKAGSGPFREAS*LLISSH
Trigger: GTGTGATGAGATTAAGAGCAAGCTTGCCTCCCTGAA...TGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGAGGCCATCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CAA 90 bp CCCTCGATGTCTGGCGCTGACAGCTCAGCGTTGATCTCGTTGATGTGTTCCTGGTTTTCTGGGAAGCTGTaGGGCAGGACGCACCATATA +
Preference number: 5 (lower is better)
Translates to: PSMSGADSSALISLMCSWFSGKL*GRTHHI
Trigger: TATATGGTGCGTCCTGCCCAACAGCTTCCCAGAAAA...CCAGGAACACATCAACGAGATCAACGCTGAGCTGTCAGCGCCAGACATCGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp TCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTTTTCTGGGAAGCTGTaGGGCAGGACGCACCATATA +
Preference number: 5 (lower is better)
Translates to: SRAGLLSSKWEPGRTGNIFSGKL*GRTHHI
Trigger: TATATGGTGCGTCCTGCCCAACAGCTTCCCAGAAAA...GATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CCTCCACGTTGGATTCCTCCGCCTCTTCCTCCTCCTCCCCATCTCTTTCCTCCTTTCTTGCCTTCTTCCTaGGAGGCTGGAAGAATCATG +
Preference number: 5 (lower is better)
Translates to: PPRWIPPPLPPPPHLFPPFLPSS*EAGRIM
Trigger: CATGATTCTTCCAGCCTCCAAGGAAGAAGGCAAGAA...AGGAGGAAAGAGATGGGGAGGAGGAGGAAGAGGCGGAGGAATCCAACGTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp ATGGCATCTTCCACACGGCGCTTCTTTGTACAGAGGATGATGCGGTTGAAGTTGGGCATGTTGGCTGCCTaGCTGTACAGCACGTCCAGC +
Preference number: 5 (lower is better)
Translates to: MASSTRRFFVQRMMRLKLGMLAA*LYSTSS
Trigger: GCTGGACGTGCTGTACAGCAAGGCAGCCAACATGCC...CAACTTCAACCGCATCATCCTCTGTACAAAGAAGCGCCGTGTGGAAGATGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CGCAGCACCTCGTCGGGCTCCATGGGAATAATGGTGCACAGAGCAAAGATGAATTCAGAGTCAGGCATGTaGGCTGCCTTGCTGTACAGC +
Preference number: 5 (lower is better)
Translates to: RSTSSGSMGIMVHRAKMNSESGM*AALLYS
Trigger: GCTGTACAGCAAGGCAGCCAACATGCCTGACTCTGA...ATTCATCTTTGCTCTGTGCACCATTATTCCCATGGAGCCCGACGAGGTGCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTTCAGAGTCAGGCATGTaGGCTGCCTTGCTGTACAGC +
Preference number: 5 (lower is better)
Translates to: RFSRVRVWIPGETSPQTASESGM*AALLYS
Trigger: GCTGTACAGCAAGGCAGCCAACATGCCTGACTCTGA...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp AGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTTTCTCCAGCAGTTTTTaGTGCAGCCAGTCGGGGTGT +
Preference number: 5 (lower is better)
Translates to: RAGLLSSKWEPGRTGNISFSSSF*CSQSGC
Trigger: ACACCCCGACTGGCTGCACAAAAAACTGCTGGAGAA...AGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGAAGCTGCCACTTCTTCTaGTGGAACCGGAGCCAGACA +
Preference number: 5 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRSCHFF*WNRSQT
Trigger: TGTCTGGCTCCGGTTCCACAAGAAGAAGTGGCAGCT...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp ACAAGACAGTTGTCATCAGCCTCCTTTCCACCCAGGTCAGGGCGGGCTGTAGGGTCCATGACAAGACAGTaGTCATCAGCCTCCTTTCCA +
Preference number: 5 (lower is better)
Translates to: TRQLSSASFPPRSGRAVGSMTRQ*SSASFP
Trigger: TGGAAAGGAGGCTGATGACAACTGTCTTGTCATGGA...CCCTACAGCCCGCCCTGACCTGGGTGGAAAGGAGGCTGATGACAACTGTCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGAGCAGTAAATCCTCCACGTaGGATTCCTCCGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: GLLSSKWEPGRTGNISESSKSST*DSSASS
Trigger: GGAAGAGGCGGAGGAATCCAACGTGGAGGATTTACT...GCTCTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GGTGATGTACTCCACGTAAGCGATGGCATCTTCCACACGGCGCTTCTTTGTACATCCAGGGCAGGGTTATaGAGCAGCAAGTGGGAACCG +
Preference number: 5 (lower is better)
Translates to: GDVLHVSDGIFHTALLCTSRAGL*SSKWEP
Trigger: CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGA...TGTACAAAGAAGCGCCGTGTGGAAGATGCCATCGCTTACGTGGAGTACATCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCTCCAGGGACAGCACCTaGCACACGTATTTGATGAAC +
Preference number: 5 (lower is better)
Translates to: VQEATEAWKSIHCVRNGASRDST*HTYLMN
Trigger: GTTCATCAAATACGTGTGCAAGGTGCTGTCCCTGGA...GGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATTCCAGGGACAGCACCTaGCACACGTATTTGATGAAC +
Preference number: 5 (lower is better)
Translates to: LQGRVIEQQVGTGEDRKHSRDST*HTYLMN
Trigger: GTTCATCAAATACGTGTGCAAGGTGCTGTCCCTGGA...ATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CCTTGTAGGCGAGCAGGAATCGCTGGATGGCTCTGCAGATGGTCTTCAGGTCAGTCCAGGGACAGCACCTaGCACACGTATTTGATGAAC +
Preference number: 5 (lower is better)
Translates to: PCRRAGIAGWLCRWSSGQSRDST*HTYLMN
Trigger: GTTCATCAAATACGTGTGCAAGGTGCTGTCCCTGGA...CTGACCTGAAGACCATCTGCAGAGCCATCCAGCGATTCCTGCTCGCCTACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCCTGGAAAAGCATTCACTGCGTGAGAAACGGCGCCCAGGGCACTCGCAGCCTCATGTCTACATGTTCCTaGCTGAGTAACACACAGAAG +
Preference number: 5 (lower is better)
Translates to: AWKSIHCVRNGAQGTRSLMSTCS*LSNTQK
Trigger: CTTCTGTGTGTTACTCAGCAAGGAACATGTAGACAT...GAGGCTGCGAGTGCCCTGGGCGCCGTTTCTCACGCAGTGAATGCTTTTCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp CAGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAACTTCAGGGGAGAAATTaGGCGCGCTCCCACCCAGAC +
Preference number: 5 (lower is better)
Translates to: QHLAHVFDELQGRVIEQQLQGRN*ARSHPD
Trigger: GTCTGGGTGGGAGCGCGCCAAATTTCTCCCCTGAAG...TTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS GCA 90 bp CCTAGTGTTCTCTGCAGGATGTGCAGGCGACGCTGCAGCAGCAGCTaGGTGTTTCTCTGGGATCCTTTGGATTGTTATGCTCCACAAACT +
Preference number: 5 (lower is better)
Translates to: PSVLCRMCRRRCSSS*VFLWDPLDCYAPQT
Trigger: AGTTTGTGGAGCATAACAATCCAAAGGATCCCAGAGAAACACGCAGCTGCTGCTGCAGCGTCGCCTGCACATCCTGCAGAGAACACTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS GCA 90 bp TCCATCAAATCAGGATTCATCCCGAGTTACAACACCTCTGAGGCCTaGAAGAGGGCTACGCCCCAGCAATTACCCCACGGATCTATCTGC +
Preference number: 5 (lower is better)
Translates to: SIKSGFIPSYNTSEA*KRATPQQLPHGSIC
Trigger: GCAGATAGATCCGTGGGGTAATTGCTGGGGCGTAGCCCTCTTGCAGGCCTCAGAGGTGTTGTAACTCGGGATGAATCCTGATTTGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS GCA 90 bp GCCAAGAAACAGAAGCCCACACAGCAAAGCAAGCCAGGAAAGCACTaGAGAGTGTTCCAGTATTCCTTCTACCCAAGACGCCTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: AKKQKPTQQSKPGKH*RVFQYSFYPRRLCL
Trigger: CAGGCACAGGCGTCTTGGGTAGAAGGAATACTGGAACACTCTGCAGTGCTTTCCTGGCTTGCTTTGCTGTGTGGGCTTCTGTTTCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536445.5
CDS GCA 90 bp TGCAGCCATATTCCTGGGTGGGAGAAGGACCTAGTGCTTACAGGATaGATGTTAATGAGCCAGCCTGTCTTCTCACCAGGCTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: CSHIPGWEKDLVLTG*MLMSQPVFSPGSFS
Trigger: GCTGAAGGAGCCTGGTGAGAAGACAGGCTGGCTCATTAACATGCATCCTGTAAGCACTAGGTCCTTCTCCCACCCAGGAATATGGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539357.1
CDS CCA 90 bp AGTTCACAATCTCTAACCAATGCCACTTGGTTTGTCCCCGCAACATaGACCTCGCGGGCAGACAAGCTCATCGTGACAAGGACACCAGCA +
Preference number: 5 (lower is better)
Translates to: SSQSLTNATWFVPAT*TSRADKLIVTRTPA
Trigger: TGCTGGTGTCCTTGTCACGATGAGCTTGTCTGCCCGCGAGGTCCATGTTGCGGGGACAAACCAAGTGGCATTGGTTAGAGATTGTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540987.1
CDS CCA 90 bp AAGAGCCTACGGAGACAGAGTTCACAATCTCTAACCAATGCCACTTaGTTTGTCCCCGCAACATGGACCTCGCGGGCAGACAAGCTCATC +
Preference number: 5 (lower is better)
Translates to: KSLRRQSSQSLTNAT*FVPATWTSRADKLI
Trigger: GATGAGCTTGTCTGCCCGCGAGGTCCATGTTGCGGGGACAAACCAAGTGGCATTGGTTAGAGATTGTGAACTCTGTCTCCGTAGGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540987.1
CDS-3UTR CAA 90 bp CAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCAAGTCCAGATCCTCTTaGGGGACAGTCTCCACTTTT +
Preference number: 5 (lower is better)
Translates to: QGRVIEQQVGTGEDRKHLKSRSS*GTVSTF
Trigger: AAAAGTGGAGACTGTCCCCAAAGAGGATCTGGACTT...GAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp CGCAAGGTCTTCTCAACCCGCTGCAGCAGGAAGTCAAAGGCGGCAGGATTCATCATCTCCTTCCTCACTTaGACAAGATCCTCCACAGTG +
Preference number: 5 (lower is better)
Translates to: RKVFSTRCSRKSKAAGFIISFLT*TRSSTV
Trigger: CACTGTGGAGGATCTTGTCAAAGTGAGGAAGGAGAT...GATGAATCCTGCCGCCTTTGACTTCCTGCTGCAGCGGGTTGAGAAGACCTTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp TTTCCTGAGGCTGATAGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCCGCATGTCCACAATGTaGTCCAACTGGTCAGCTATC +
Preference number: 5 (lower is better)
Translates to: FPEADRGFPLDPAPNKQGRMSTM*SNWSAI
Trigger: GATAGCTGACCAGTTGGACAACATTGTGGACATGCG...GCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCTATCAGCCTCAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CAA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTACCATGATGGTGGGTTaGGTCTCCTGGACGTGTTCA +
Preference number: 5 (lower is better)
Translates to: RFSRVRVWIPGETSPQTATMMVG*VSWTCS
Trigger: TGAACACGTCCAGGAGACCAAACCCACCATCATGGT...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CAA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACTCCTGCTCTTGCTTGTaGGGGAAGATGATGTTGGCG +
Preference number: 5 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNSCSCL*GKMMLA
Trigger: CGCCAACATCATCTTCCCCAACAAGCAAGAGCAGGA...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGAGCTTTGCTCCAGGCTTATaGAAGTCACAGGCAGCACAG +
Preference number: 5 (lower is better)
Translates to: GLLSSKWEPGRTGNISESFAPGL*KSQAAQ
Trigger: CTGTGCTGCCTGTGACTTCAATAAGCCTGGAGCAAA...GCTCTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTTCCTGGTACTGGTCATaGGTGAAGCCTTCCTTGACC +
Preference number: 5 (lower is better)
Translates to: RFSRVRVWIPGETSPQTASWYWS*VKPSLT
Trigger: GGTCAAGGAAGGCTTCACCAATGACCAGTACCAGGA...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGTTCTTGCCTTCTTCCTaGGAGGCTGGAAGAATCATG +
Preference number: 5 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVFLPSS*EAGRIM
Trigger: CATGATTCTTCCAGCCTCCAAGGAAGAAGGCAAGAA...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCACACGTACCATGTCAGGAGCACTaGGCCTCGGACTGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: LIHLVCDVGVQGQHLAHVPCQEH*ASDCLL
Trigger: CAGAAGACAGTCCGAGGCCAAGTGCTCCTGACATGG...TACGTGTGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CCAGGGTCTCCAGGAGGTACGACATGCCGTAGTGCTGGGCAATGTTCCGGAATATCAGCGTTGATCTCGTaGATGTGTTCCTGGTACATG +
Preference number: 5 (lower is better)
Translates to: PGSPGGTTCRSAGQCSGISALIS*MCSWYM
Trigger: CATGTACCAGGAACACATCAACGAGATCAACGCTGA...TATTCCGGAACATTGCCCAGCACTACGGCATGTCGTACCTCCTGGAGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp AGGCTTTCCGGCAGTAATCCGCCAGCCTTCTCTTCTCGTATTTCGCCTGTTCCTGCTGACAGCTCAGCGTaGATCTCGTTGATGTGTTCC +
Preference number: 5 (lower is better)
Translates to: RLSGSNPPAFSSRISPVPADSSA*ISLMCS
Trigger: GGAACACATCAACGAGATCAACGCTGAGCTGTCAGC...AGGAACAGGCGAAATACGAGAAGAGAAGGCTGGCGGATTACTGCCGGAAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GCTGATGGACGTAGACTTCTGCTCCCCGTAATCTTCCAGCTTCCGAGACATGGAGCTGACAGCTCAGCGTaGATCTCGTTGATGTGTTCC +
Preference number: 5 (lower is better)
Translates to: ADGRRLLLPVIFQLPRHGADSSA*ISLMCS
Trigger: GGAACACATCAACGAGATCAACGCTGAGCTGTCAGC...TCCATGTCTCGGAAGCTGGAAGATTACGGGGAGCAGAAGTCTACGTCCATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp TCAGACAGTAGATGGCAGGGACAAACTAAGGCTGGCTCTGGGCCAAAGACACGAAGCTTCTTCATCATGTaGTGGAGTGTGCGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: SDSRWQGQTKAGSGPKTRSFFIM*WSVRCR
Trigger: CCTGCACCGCACACTCCACAACATGATGAAGAAGCT...TCGTGTCTTTGGCCCAGAGCCAGCCTTAGTTTGTCCCTGCCATCTACTGTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGTGCTTTCTGGGAGTCTaGCAGTCCACAGTGAATACG +
Preference number: 5 (lower is better)
Translates to: AGLLSSKWEPGRTGNISECFLGV*QSTVNT
Trigger: CGTATTCACTGTGGACTGCAAGACTCCCAGAAAGCA...CTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCAGTAAATCCTCCACGTaGGATTCCTCCGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKISKSST*DSSASS
Trigger: GGAAGAGGCGGAGGAATCCAACGTGGAGGATTTACT...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCACACGTATCCAGGGCAGGGTTATaGAGCAGCAAGTGGGAACCG +
Preference number: 5 (lower is better)
Translates to: LIHLVCDVGVQGQHLAHVSRAGL*SSKWEP
Trigger: CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGA...TACGTGTGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp TCAAAGCCCTTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCTCCAGGGCAGGGTTATaGAGCAGCAAGTGGGAACCG +
Preference number: 5 (lower is better)
Translates to: SKPLSSAREPSSLNTAYLSRAGL*SSKWEP
Trigger: CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGA...GAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAAGGGCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp CACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGACCTGGTTTGTGATGTaGGTGTCCAGGGACAGCACC +
Preference number: 5 (lower is better)
Translates to: HTYLMNSRAGLLSSKWEPTWFVM*VSRDST
Trigger: GGTGCTGTCCCTGGACACCAACATCACAAACCAGGT...CGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGTGGTGCCCTGTGAAATaGGCCTTTCTTCTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVWCPVK*AFLLSA
Trigger: AGCAGAAAGAAGAAAGGCCAATTTCACAGGGCACCA...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp ACTCGCCCCTCCACTGCCAGGCCATCTTCCGCTGGCAGTTTGCTCCAGGCTTATACATTTCATACTTGTTaGGTGCCCTGTGAAATTGGC +
Preference number: 5 (lower is better)
Translates to: TRPSTARPSSAGSLLQAYTFHTC*VPCEIG
Trigger: GCCAATTTCACAGGGCACCAAACAAGTATGAAATGT...ATAAGCCTGGAGCAAACTGCCAGCGGAAGATGGCCTGGCAGTGGAGGGGCGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS TCA 90 bp CCCCGTAATCTTCCAGCTTCCGAGACATGGAACGGTTCTCAGAGATaGGCTCGAATAGCTCAGAGTCAGGCATGTTGGCTGCCTAGAGAA +
Preference number: 5 (lower is better)
Translates to: PRNLPASETWNGSQR*ARIAQSQACWLPRE
Trigger: TTCTCTAGGCAGCCAACATGCCTGACTCTGAGCTATTCGAGCTCATCTCTGAGAACCGTTCCATGTCTCGGAAGCTGGAAGATTACGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536445.5
CDS-3UTR CAA 90 bp CCTTGTAGGCGAGCAGGAATCGCTGGATGGCTCTGCAGATGGTCTTCAGGTCAGCCTTCATATTCTGGCTaGGGGGTGAACTCAAAATCT +
Preference number: 5 (lower is better)
Translates to: PCRRAGIAGWLCRWSSGQPSYSG*GVNSKS
Trigger: AGATTTTGAGTTCACCCCCAAGCCAGAATATGAAGG...CTGACCTGAAGACCATCTGCAGAGCCATCCAGCGATTCCTGCTCGCCTACAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp CTGGGTGATGATGTTGGCCCCTGTGAAGCAGACGATGCCAGCCATCTCCATGGACCTTCATATTCTGGCTaGGGGGTGAACTCAAAATCT +
Preference number: 5 (lower is better)
Translates to: LGDDVGPCEADDASHLHGPSYSG*GVNSKS
Trigger: AGATTTTGAGTTCACCCCCAAGCCAGAATATGAAGG...TCCATGGAGATGGCTGGCATCGTCTGCTTCACAGGGGCCAACATCATCACCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GGTGTGGTGCAGGAAGCAACAGAGGCCTGGAAAAGCATTCACTGCGTGAGAAACTTTGCTCCAGGCTTATaGAAGTCACAGGCAGCACAG +
Preference number: 5 (lower is better)
Translates to: GVVQEATEAWKSIHCVRNFAPGL*KSQAAQ
Trigger: CTGTGCTGCCTGTGACTTCAATAAGCCTGGAGCAAA...GTTTCTCACGCAGTGAATGCTTTTCCAGGCCTCTGTTGCTTCCTGCACCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp ATGAGCCTCCTTACCTCATCGGGTTCATTGAAGACACAAAAGGGGCCTTCATATGCCTGGGTGATGATGTaGGCCCCTGTGAAGCAGACG +
Preference number: 5 (lower is better)
Translates to: MSLLTSSGSLKTQKGPSYAWVMM*APVKQT
Trigger: CGTCTGCTTCACAGGGGCCAACATCATCACCCAGGC...ATATGAAGGCCCCTTTTGTGTCTTCAATGAACCCGATGAGGTAAGGAGGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS-3UTR CAA 90 bp TCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTCCTGTGTTGGTGAAGCCTTCCTaGACCATGATGTTCAACATG +
Preference number: 5 (lower is better)
Translates to: SRVRVWIPGETSPQTAPVLVKPS*TMMFNM
Trigger: CATGTTGAACATCATGGTCAAGGAAGGCTTCACCAA...CACAGGAGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGAGCTTCTTGCCTTCTTCCTaGGAGGCTGGAAGAATCATG +
Preference number: 5 (lower is better)
Translates to: GLLSSKWEPGRTGNISESFLPSS*EAGRIM
Trigger: CATGATTCTTCCAGCCTCCAAGGAAGAAGGCAAGAA...GCTCTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CTGCATGCTCAGACCGTGGACTGCTGCCCGGGCCTCCACAAATGGCCAGTCAAAAGTCCCAATCCAGAATaGCTCGAATATCAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: LHAQTVDCCPGLHKWPVKSPNPE*LEYQSL
Trigger: AAGACTTTGATATTCGAGCAATTCTGGATTGGGACT...TTTGACTGGCCATTTGTGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp TGTAGACCATGTTGGAGCGAGGAAGGACCCGATTTACCTTGCGATACGAAGCACTTCTCCAGCAGTTTTTaGTGCAGCCAGTCGGGGTGT +
Preference number: 5 (lower is better)
Translates to: CRPCWSEEGPDLPCDTKHFSSSF*CSQSGC
Trigger: ACACCCCGACTGGCTGCACAAAAAACTGCTGGAGAA...GTGCTTCGTATCGCAAGGTAAATCGGGTCCTTCCTCGCTCCAACATGGTCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCCATAGAAGGAGTTCAGGATGCACTTGTGGGCCAGCTGCAGCGAGTCATACAGTCAGCGTTGATCTCGTaGATGTGTTCCTGGTACATG +
Preference number: 5 (lower is better)
Translates to: AIEGVQDALVGQLQRVIQSALIS*MCSWYM
Trigger: CATGTACCAGGAACACATCAACGAGATCAACGCTGA...CTGTATGACTCGCTGCAGCTGGCCCACAAGTGCATCCTGAACTCCTTCTATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCAGCTTCTTCATCATGTaGTGGAGTGTGCGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: AHVFDELQGRVIEQQVGTSFFIM*WSVRCR
Trigger: CCTGCACCGCACACTCCACAACATGATGAAGAAGCT...GGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTTCCAGGGACAGCACCTaGCACACGTATTTGATGAAC +
Preference number: 5 (lower is better)
Translates to: RFSRVRVWIPGETSPQTASRDST*HTYLMN
Trigger: GTTCATCAAATACGTGTGCAAGGTGCTGTCCCTGGA...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGAGCTGGTGCCCTGTGAAATaGGCCTTTCTTCTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: GLLSSKWEPGRTGNISESWCPVK*AFLLSA
Trigger: AGCAGAAAGAAGAAAGGCCAATTTCACAGGGCACCA...GCTCTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp TTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAAGGTACACAGCAAGCATaGCCCAGCATGAACCACCGC +
Preference number: 5 (lower is better)
Translates to: LHTYLMNSRAGLLSSKWEGTQQA*PSMNHR
Trigger: GCGGTGGTTCATGCTGGGCAATGCTTGCTGTGTACC...TTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS-3UTR CAA 90 bp CTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCACACGTAAGAGACATGGAGCCGTaGGCTACCACCTCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: LIHLVCDVGVQGQHLAHVRDMEP*ATTSAS
Trigger: TGAAGCAGAGGTGGTAGCCAACGGCTCCATGTCTCT...TACGTGTGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp AGGCTTTCCGGCAGTAATCCGCCAGCCTTCTCTTCTCGTATTTCGCCTGTTCCTACCTCATCGGGTTCATaGAAGACACAAAAGGGGCCT +
Preference number: 5 (lower is better)
Translates to: RLSGSNPPAFSSRISPVPTSSGS*KTQKGP
Trigger: AGGCCCCTTTTGTGTCTTCAATGAACCCGATGAGGT...AGGAACAGGCGAAATACGAGAAGAGAAGGCTGGCGGATTACTGCCGGAAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS-3UTR CAA 90 bp GGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGGAAACATCTCTGAGAGCGTGTTCAAACCACCTTaGGATCAGATGAGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: GLLSSKWEPGRTGNISESVFKPP*DQMSLL
Trigger: AAGGAGGCTCATCTGATCCAAAGGTGGTTTGAACAC...GCTCTCAGAGATGTTTCCTGTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS TCA 90 bp AGAAAGACAATGGGTAAAACACTGCAGAAATCAAGGGGCAGAGTCTaGGCTCACCCTGGACTGTGCTCCTCTAGGCCATGCCCTTCTCTA +
Preference number: 5 (lower is better)
Translates to: RKTMGKTLQKSRGRV*AHPGLCSSRPCPSL
Trigger: TAGAGAAGGGCATGGCCTAGAGGAGCACAGTCCAGGGTGAGCTCAGACTCTGCCCCTTGATTTCTGCAGTGTTTTACCCATTGTCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536445.5
CDS GCA 90 bp GCCTGCAAGAGGGCTACGCCCCAGCAATTACCCCACGGATCTATCTaGATGAGCTCATGCATGAAGCCTCTCACTGATTTGCTATTTGTA +
Preference number: 5 (lower is better)
Translates to: ACKRATPQQLPHGSI*MSSCMKPLTDLLFV
Trigger: TACAAATAGCAAATCAGTGAGAGGCTTCATGCATGAGCTCATGCAGATAGATCCGTGGGGTAATTGCTGGGGCGTAGCCCTCTTGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS CCA 90 bp AGTGAGCTCATTTGCGACATAATCCTGAGAGAAGGTGATCATTCCTaGAAGTATAAGGATGCTGAGGGAGGGGTCTGGGACCTGTCTGGC +
Preference number: 5 (lower is better)
Translates to: SELICDIILREGDHS*KYKDAEGGVWDLSG
Trigger: GCCAGACAGGTCCCAGACCCCTCCCTCAGCATCCTTATACTTCCAGGAATGATCACCTTCTCTCAGGATTATGTCGCAAATGAGCTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534922.5
CDS-3UTR CAA 90 bp TTTCCTGAGGCTGATAGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCGGACAGTCTCCACTTTaGCAATTTTGCCCTGAAACT +
Preference number: 5 (lower is better)
Translates to: FPEADRGFPLDPAPNKQGGQSPL*QFCPET
Trigger: AGTTTCAGGGCAAAATTGCAAAAGTGGAGACTGTCC...GCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCTATCAGCCTCAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CAA 90 bp GCGACCGAAGCCAGCGGTAGAAGTGCATCACCTGGTTGTCTGCATAGATGTTGTATCTCCTTCCTCACTTaGACAAGATCCTCCACAGTG +
Preference number: 5 (lower is better)
Translates to: ATEASGRSASPGCLHRCCISFLT*TRSSTV
Trigger: CACTGTGGAGGATCTTGTCAAAGTGAGGAAGGAGAT...ACAACATCTATGCAGACAACCAGGTGATGCACTTCTACCGCTGGCTTCGGTCGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTGTGTTCAAACCACCTTaGGATCAGATGAGCCTCATC +
Preference number: 5 (lower is better)
Translates to: RFSRVRVWIPGETSPQTAVFKPP*DQMSLI
Trigger: GATGAGGCTCATCTGATCCAAAGGTGGTTTGAACAC...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320574.10
CDS-3UTR CAA 90 bp ACAGGAAACATCTCTGAGAGCTCAGTGGAGTTCCGAGAGCCTGTGACTTTCTTCTCCTGCTCTTGCTTGTaGGGGAAGATGATGTTGGCG +
Preference number: 5 (lower is better)
Translates to: TGNISESSVEFREPVTFFSCSCL*GKMMLA
Trigger: CGCCAACATCATCTTCCCCAACAAGCAAGAGCAGGA...GAAGAAAGTCACAGGCTCTCGGAACTCCACTGAGCTCTCAGAGATGTTTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp CGGTTCTCAGAGATGAGCTCGAATAGCTCAGAGTCAGGCATGTTGGCTGCCTTGTTCAAAGTTGGTGACTaGCTCCACAGGCACTTTCTC +
Preference number: 5 (lower is better)
Translates to: RFSEMSSNSSESGMLAALFKVGD*LHRHFL
Trigger: GAGAAAGTGCCTGTGGAGCAAGTCACCAACTTTGAA...CAAGGCAGCCAACATGCCTGACTCTGAGCTATTCGAGCTCATCTCTGAGAACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGTTCAGGGAGGCAAGCTaGCTCTTAATCTCATCACAC +
Preference number: 5 (lower is better)
Translates to: VFDELQGRVIEQQVGTGEFREAS*LLISSH
Trigger: GTGTGATGAGATTAAGAGCAAGCTTGCCTCCCTGAA...CTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp CGGTTCTCAGAGATGAGCTCGAATAGCTCAGAGTCAGGCATGTTGGCTGCCTTGTTCTTTTTCCACACCTaGTGGAGCCCTTTGAACTCG +
Preference number: 5 (lower is better)
Translates to: RFSEMSSNSSESGMLAALFFFHT*WSPLNS
Trigger: CGAGTTCAAAGGGCTCCACAAGGTGTGGAAAAAGAA...CAAGGCAGCCAACATGCCTGACTCTGAGCTATTCGAGCTCATCTCTGAGAACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp TTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCTTCTTCAATGCCTGGGTGATGATGTaGGCCCCTGTGAAGCAGACG +
Preference number: 5 (lower is better)
Translates to: LSSAREPSSLNTAYLFFNAWVMM*APVKQT
Trigger: CGTCTGCTTCACAGGGGCCAACATCATCACCCAGGC...ATTGAAGAAGAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp CCGACATCCACCAGGCGAAGCAGGTCTCGGTTCAGCTTATTCACCTGGTTTGTGTTGGTGAAGCCTTCCTaGACCATGATGTTCAACATG +
Preference number: 5 (lower is better)
Translates to: PTSTRRSRSRFSLFTWFVLVKPS*TMMFNM
Trigger: CATGTTGAACATCATGGTCAAGGAAGGCTTCACCAA...CACAAACCAGGTGAATAAGCTGAACCGAGACCTGCTTCGCCTGGTGGATGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp TCAAAGCCCTTGAGCTCAGCCAGAGAACCGTCTTCATTGAACACAGCATACCTCTCCTGGTACTGGTCATaGGTGAAGCCTTCCTTGACC +
Preference number: 5 (lower is better)
Translates to: SKPLSSAREPSSLNTAYLSWYWS*VKPSLT
Trigger: GGTCAAGGAAGGCTTCACCAATGACCAGTACCAGGA...GAGGTATGCTGTGTTCAATGAAGACGGTTCTCTGGCTGAGCTCAAGGGCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp TTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACAGAGAACCGTCTTCATaGAACACAGCATACCTCTTC +
Preference number: 5 (lower is better)
Translates to: FDELQGRVIEQQVGTGEDREPSS*NTAYLF
Trigger: GAAGAGGTATGCTGTGTTCAATGAAGACGGTTCTCT...GTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CCTGAACTGTTGATCTCAACAGTGGCTTGGTCATCGAACTCCATGACAAGACAGTTGACCTCAAAGCCCTaGAGCTCAGCCAGAGAACCG +
Preference number: 5 (lower is better)
Translates to: PELLISTVAWSSNSMTRQLTSKP*SSAREP
Trigger: CGGTTCTCTGGCTGAGCTCAAGGGCTTTGAGGTCAA...CTGTCTTGTCATGGAGTTCGATGACCAAGCCACTGTTGAGATCAACAGTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GAGCCATTTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTGCTTGGAAAATGGCCTCAAACACCGAGGATaGGAAGATCTTAATCAGCTG +
Preference number: 5 (lower is better)
Translates to: EPFPEKVLPHRGLCLENGLKHRG*EDLNQL
Trigger: CAGCTGATTAAGATCTTCCAATCCTCGGTGTTTGAG...GCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAAGCTTCTTCATCATGTaGTGGAGTGTGCGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: LAHVFDELQGRVIEQQVGSFFIM*WSVRCR
Trigger: CCTGCACCGCACACTCCACAACATGATGAAGAAGCT...TCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GTTCAGCTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGCAAGTAAATCCTCCACGTaGGATTCCTCCGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: VQLIHLVCDVGVQGQHLASKSST*DSSASS
Trigger: GGAAGAGGCGGAGGAATCCAACGTGGAGGATTTACT...TGCAAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp ATGGCATCTTCCACACGGCGCTTCTTTGTACAGAGGATGATGCGGTTGAAGTTGAGTAAATCCTCCACGTaGGATTCCTCCGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: MASSTRRFFVQRMMRLKLSKSST*DSSASS
Trigger: GGAAGAGGCGGAGGAATCCAACGTGGAGGATTTACT...CAACTTCAACCGCATCATCCTCTGTACAAAGAAGCGCCGTGTGGAAGATGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp ACAGGAAACATCTCTGAGAGCTCAGTGGAGTTCCGAGAGCCTGTGACTTTCTTCACCTTGCACACGTATTaGATGAACTCCAGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: TGNISESSVEFREPVTFFTLHTY*MNSRAG
Trigger: CCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGT...GAAGAAAGTCACAGGCTCTCGGAACTCCACTGAGCTCTCAGAGATGTTTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp GCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCTCCAGGGACAGCACCTaGCACACGTATTTGATGAAC +
Preference number: 5 (lower is better)
Translates to: AHVFDELQGRVIEQQVGTSRDST*HTYLMN
Trigger: GTTCATCAAATACGTGTGCAAGGTGCTGTCCCTGGA...GGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp AAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTAGCCCCACCAGGGCCTaGGGAACCCGTCTCGTCTCA +
Preference number: 5 (lower is better)
Translates to: KKFPASRERNCQRMEGLLSPTRA*GTRLVS
Trigger: TGAGACGAGACGGGTTCCCAAGGCCCTGGTGGGGCT...AAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp AGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCTGGTGCCCTGTGAAATaGGCCTTTCTTCTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: RGFPLDPAPNKQGSQAKIWCPVK*AFLLSA
Trigger: AGCAGAAAGAAGAAAGGCCAATTTCACAGGGCACCA...GATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp ACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGTGGTGCCCTGTGAAATaGGCCTTTCTTCTTTCTGCT +
Preference number: 5 (lower is better)
Translates to: TYLMNSRAGLLSSKWEPGWCPVK*AFLLSA
Trigger: AGCAGAAAGAAGAAAGGCCAATTTCACAGGGCACCA...CCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS TCA 90 bp AAAGACGGTCATACCCTGAGAACAAAGCTCATGGAGCTGCAATTCTaGTCTGACGGAATGCCTGAGGCCTTGGAAAGATCCACATGTCCG +
Preference number: 5 (lower is better)
Translates to: KDGHTLRTKLMELQF*SDGMPEALERSTCP
Trigger: CGGACATGTGGATCTTTCCAAGGCCTCAGGCATTCCGTCAGATCAGAATTGCAGCTCCATGAGCTTTGTTCTCAGGGTATGACCGTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS-3UTR CAA 90 bp ATATACCATCTGTGTCCAGCTCTAAGGGCCTCCCAATCTGCTCGATCAGCTCCCAACTTGAGGGGCAGTTaGGTCGTCTCAATGTCAAAT +
Preference number: 5 (lower is better)
Translates to: IYHLCPALRASQSARSAPNLRGS*VVSMSN
Trigger: ATTTGACATTGAGACGACCAAACTGCCCCTCAAGTT...GGGAGCTGATCGAGCAGATTGGGAGGCCCTTAGAGCTGGACACAGATGGTATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp ATAACCATGTCTACATGTTCCTTGCTGAGTAACACACAGAAGACTCAGGCTGCTTTGGGGAAGATGATGTaGGCGTGGAAGGCCTGCACC +
Preference number: 5 (lower is better)
Translates to: ITMSTCSLLSNTQKTQAALGKMM*AWKACT
Trigger: GGTGCAGGCCTTCCACGCCAACATCATCTTCCCCAA...AGCAGCCTGAGTCTTCTGTGTGTTACTCAGCAAGGAACATGTAGACATGGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp CGCAGCACCTCGTCGGGCTCCATGGGAATAATGGTGCACAGAGCAAAGATGAATTTGGTGAAGCCTTCCTaGACCATGATGTTCAACATG +
Preference number: 5 (lower is better)
Translates to: RSTSSGSMGIMVHRAKMNLVKPS*TMMFNM
Trigger: CATGTTGAACATCATGGTCAAGGAAGGCTTCACCAA...ATTCATCTTTGCTCTGTGCACCATTATTCCCATGGAGCCCGACGAGGTGCTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp GTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGAGAGAACCGTCTTCATaGAACACAGCATACCTCTTC +
Preference number: 5 (lower is better)
Translates to: VFDELQGRVIEQQVGTGEREPSS*NTAYLF
Trigger: GAAGAGGTATGCTGTGTTCAATGAAGACGGTTCTCT...CTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp TGCAGGGTGAAGGCCATCAGCTTCTTCTGTAGAACTTCCACCAGCGTCATCTCGCTCAAACACCGAGGATaGGAAGATCTTAATCAGCTG +
Preference number: 5 (lower is better)
Translates to: CRVKAISFFCRTSTSVISLKHRG*EDLNQL
Trigger: CAGCTGATTAAGATCTTCCAATCCTCGGTGTTTGAG...CGAGATGACGCTGGTGGAAGTTCTACAGAAGAAGCTGATGGCCTTCACCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGTGCTTTCTGGGAGTCTaGCAGTCCACAGTGAATACG +
Preference number: 5 (lower is better)
Translates to: HLAHVFDELQGRVIEQQVCFLGV*QSTVNT
Trigger: CGTATTCACTGTGGACTGCAAGACTCCCAGAAAGCA...CACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CAGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAATGCTTTCTGGGAGTCTaGCAGTCCACAGTGAATACG +
Preference number: 5 (lower is better)
Translates to: QHLAHVFDELQGRVIEQQCFLGV*QSTVNT
Trigger: CGTATTCACTGTGGACTGCAAGACTCCCAGAAAGCA...TTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp AGACTATGGAAAACTCGCCACACAGTGGTCTCTGGCTCTGCCATTAAGACTAAGACCTTGCACACGTATTaGATGAACTCCAGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: RLWKTRHTVVSGSAIKTKTLHTY*MNSRAG
Trigger: CCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGT...CTTAGTCTTAATGGCAGAGCCAGAGACCACTGTGTGGCGAGTTTTCCATAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS GCA 90 bp CTGCAGCAGCAGCTGCGTGTTTCTCTGGGATCCTTTGGATTGTTATaGTCCACAAACTCAGAAATACACTACTTATCCCAGAGGCACTGG +
Preference number: 5 (lower is better)
Translates to: LQQQLRVSLGSFGLL*STNSEIHYLSQRHW
Trigger: CCAGTGCCTCTGGGATAAGTAGTGTATTTCTGAGTTTGTGGAGCATAACAATCCAAAGGATCCCAGAGAAACACGCAGCTGCTGCTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS GCA 90 bp GCTACGCCCCAGCAATTACCCCACGGATCTATCTGCATGAGCTCATaGATGAAGCCTCTCACTGATTTGCTATTTGTAACAACGGCACAA +
Preference number: 5 (lower is better)
Translates to: ATPQQLPHGSICMSS*MKPLTDLLFVTTAQ
Trigger: TTGTGCCGTTGTTACAAATAGCAAATCAGTGAGAGGCTTCATGCATGAGCTCATGCAGATAGATCCGTGGGGTAATTGCTGGGGCGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS GCA 90 bp AAGCACTGCAGAGTGTTCCAGTATTCCTTCTACCCAAGACGCCTGTaGCTGGGAAACATATGCACCGAGATATCTCGTTCAATGCAACAC +
Preference number: 5 (lower is better)
Translates to: KHCRVFQYSFYPRRL*LGNICTEISRSMQH
Trigger: GTGTTGCATTGAACGAGATATCTCGGTGCATATGTTTCCCAGGCACAGGCGTCTTGGGTAGAAGGAATACTGGAACACTCTGCAGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536445.5
CDS GCA 90 bp CCTGGTGCTCCCTTGCTCGTGTGTTTCACTCTATACAAGACAATATaGCAAGAAACAGAAGCCCACACAGCAAAGCAAGCCAGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: PGAPLLVCFTLYKTI*QETEAHTAKQARKA
Trigger: TGCTTTCCTGGCTTGCTTTGCTGTGTGGGCTTCTGTTTCTTGGCATATTGTCTTGTATAGAGTGAAACACACGAGCAAGGGAGCACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536445.5
CDS-3UTR CAA 90 bp GGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCTCACAAGCCAAAATCCAGTCTGCTTCCGTCATCTaGAATAAAGTAGTAATCCAC +
Preference number: 5 (lower is better)
Translates to: GFPLDPAPNKQGSQAKIQSASVI*NKVVIH
Trigger: GTGGATTACTACTTTATTCAAGATGACGGAAGCAGA...CTGGATTTTGGCTTGTGAGCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320574.10
ENST00000672742.1
CDS-3UTR CAA 90 bp TTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGACTCTGCTTCCGTCATCTaGAATAAAGTAGTAATCCAC +
Preference number: 5 (lower is better)
Translates to: FDELQGRVIEQQVGTGEDSASVI*NKVVIH
Trigger: GTGGATTACTACTTTATTCAAGATGACGGAAGCAGA...GTCCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp TTTCCTGAGGCTGATAGAGGGTTCCCTCTAGACCCGGCTCCAAATAAGCAGGGCAGTCCCAATCCAGAATaGCTCGAATATCAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: FPEADRGFPLDPAPNKQGSPNPE*LEYQSL
Trigger: AAGACTTTGATATTCGAGCAATTCTGGATTGGGACT...GCCCTGCTTATTTGGAGCCGGGTCTAGAGGGAACCCTCTATCAGCCTCAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp TTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAATGCTTTCTGGGAGTCTaGCAGTCCACAGTGAATACG +
Preference number: 5 (lower is better)
Translates to: LHTYLMNSRAGLLSSKWECFLGV*QSTVNT
Trigger: CGTATTCACTGTGGACTGCAAGACTCCCAGAAAGCA...TTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434528.4
ENST00000441786.3
ENST00000537064.5
ENST00000544870.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp AGATTCTCACGGGTTAGGGTCTGGATTCCTGGGGAAACCAGCCCACAAACTGCTACATTTCATACTTGTTaGGTGCCCTGTGAAATTGGC +
Preference number: 5 (lower is better)
Translates to: RFSRVRVWIPGETSPQTATFHTC*VPCEIG
Trigger: GCCAATTTCACAGGGCACCAAACAAGTATGAAATGT...AGCAGTTTGTGGGCTGGTTTCCCCAGGAATCCAGACCCTAACCCGTGAGAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp CACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGACATTTCATACTTGTTaGGTGCCCTGTGAAATTGGC +
Preference number: 5 (lower is better)
Translates to: HVFDELQGRVIEQQVGTGTFHTC*VPCEIG
Trigger: GCCAATTTCACAGGGCACCAAACAAGTATGAAATGT...CCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS CCA 90 bp ACTGCAGAGTGTTCCAGTATTCCTTCTACCCAAGACGCCTGTGCCTaGGAAACATATGCACCGAGATATCTCGTTCAATGCAACACCATT +
Preference number: 5 (lower is better)
Translates to: TAECSSIPSTQDACA*ETYAPRYLVQCNTI
Trigger: AATGGTGTTGCATTGAACGAGATATCTCGGTGCATATGTTTCCCAGGCACAGGCGTCTTGGGTAGAAGGAATACTGGAACACTCTGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536445.5
CDS-3UTR CAA 90 bp TCGGTTCAGCTTATTCACCTGGTTTGTGATGTTGGTGTCCAGGGACAGCACCTTGGACAGTCTCCACTTTaGCAATTTTGCCCTGAAACT +
Preference number: 5 (lower is better)
Translates to: SVQLIHLVCDVGVQGQHLGQSPL*QFCPET
Trigger: AGTTTCAGGGCAAAATTGCAAAAGTGGAGACTGTCC...AAGGTGCTGTCCCTGGACACCAACATCACAAACCAGGTGAATAAGCTGAACCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp ATGGCATCTTCCACACGGCGCTTCTTTGTACAGAGGATGATGCGGTTGAAGTTGAACTTGAGGGGCAGTTaGGTCGTCTCAATGTCAAAT +
Preference number: 5 (lower is better)
Translates to: MASSTRRFFVQRMMRLKLNLRGS*VVSMSN
Trigger: ATTTGACATTGAGACGACCAAACTGCCCCTCAAGTT...CAACTTCAACCGCATCATCCTCTGTACAAAGAAGCGCCGTGTGGAAGATGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp TATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGGGAACCGGGGAGGAGTCCCAATCCAGAATaGCTCGAATATCAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: YLMNSRAGLLSSKWEPGRSPNPE*LEYQSL
Trigger: AAGACTTTGATATTCGAGCAATTCTGGATTGGGACT...CCTCCCCGGTTCCCACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS-3UTR CAA 90 bp AGCACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGATCCCTTCCATTCATTaGTGGTATGACCACAAAGGC +
Preference number: 5 (lower is better)
Translates to: STLHTYLMNSRAGLLSSKIPSIH*WYDHKG
Trigger: GCCTTTGTGGTCATACCACAAATGAATGGAAGGGAT...CTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434528.4
CDS TCA 90 bp AGTGCTTCCTCGATACACTTCATCTGCACACTAACCTGCATAGCTTaGTTTGCAAACTCTAAGCCTGCAGACCCAAACCAAGGCATAGGA +
Preference number: 5 (lower is better)
Translates to: SASSIHFICTLTCIA*FANSKPADPNQGIG
Trigger: TCCTATGCCTTGGTTTGGGTCTGCAGGCTTAGAGTTTGCAAATCAAGCTATGCAGGTTAGTGTGCAGATGAAGTGTATCGAGGAAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544692.5
CDS-3UTR CAA 90 bp CACCTTGCACACGTATTTGATGAACTCCAGGGCAGGGTTATTGAGCAGCAAGTGACATTTCATACTTGTTaGGTGCCCTGTGAAATTGGC +
Preference number: 5 (lower is better)
Translates to: HLAHVFDELQGRVIEQQVTFHTC*VPCEIG
Trigger: GCCAATTTCACAGGGCACCAAACAAGTATGAAATGT...CACTTGCTGCTCAATAACCCTGCCCTGGAGTTCATCAAATACGTGTGCAAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434528.4
ENST00000672002.1
ENST00000672742.1
CDS GCA 90 bp AGTGCTGGGCTCATGAATATTCTGTGTGATACCCTGGTGCTCCCTTaGTCGTGTGTTTCACTCTATACAAGACAATATGCCAAGAAACAG +
Preference number: 5 (lower is better)
Translates to: SAGLMNILCDTLVLP*SCVSLYTRQYAKKQ
Trigger: CTGTTTCTTGGCATATTGTCTTGTATAGAGTGAAACACACGAGCAAGGGAGCACCAGGGTATCACACAGAATATTCATGAGCCCAGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536445.5
CDS-3UTR CAA 90 bp ATAACCATGTCTACATGTTCCTTGCTGAGTAACACACAGAAGACTCAGGCTGCTAAGTCCAGATCCTCTTaGGGGACAGTCTCCACTTTT +
Preference number: 5 (lower is better)
Translates to: ITMSTCSLLSNTQKTQAAKSRSS*GTVSTF
Trigger: AAAAGTGGAGACTGTCCCCAAAGAGGATCTGGACTT...AGCAGCCTGAGTCTTCTGTGTGTTACTCAGCAAGGAACATGTAGACATGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp AGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTTAGCTTCTTCATCATGTaGTGGAGTGTGCGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: RNSQHREKEIVREWKVSFSFFIM*WSVRCR
Trigger: CCTGCACCGCACACTCCACAACATGATGAAGAAGCT...AAAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434528.4
ENST00000537064.5
ENST00000672002.1
ENST00000672742.1
CDS CCA 90 bp ATGAAGCCTCTCACTGATTTGCTATTTGTAACAACGGCACAAGGCTaGAGAGAGGCTAAATGTTCTTTCATATGGCATGTCCTCACACAG +
Preference number: 5 (lower is better)
Translates to: MKPLTDLLFVTTAQG*REAKCSFIWHVLTQ
Trigger: CTGTGTGAGGACATGCCATATGAAAGAACATTTAGCCTCTCTCCAGCCTTGTGCCGTTGTTACAAATAGCAAATCAGTGAGAGGCTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS-3UTR CAA 90 bp AGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTTCGCATGTCCACAATGTaGTCCAACTGGTCAGCTATC +
Preference number: 5 (lower is better)
Translates to: RNSQHREKEIVREWKVSFRMSTM*SNWSAI
Trigger: GATAGCTGACCAGTTGGACAACATTGTGGACATGCG...AAAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537064.5
ENST00000672742.1
CDS-3UTR CAA 90 bp AAGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTGTGTTCAAACCACCTTaGGATCAGATGAGCCTCATC +
Preference number: 5 (lower is better)
Translates to: KKFPASRERNCQRMEGLLVFKPP*DQMSLI
Trigger: GATGAGGCTCATCTGATCCAAAGGTGGTTTGAACAC...AAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537064.5
CDS-3UTR CAA 90 bp AGAAATTCCCAGCATCGAGAGAAAGAAATTGTCAGAGAATGGAAGGTCTCCTTTATCAAGCTTCAACACTaGGCCACTCTGACTTCCTCT +
Preference number: 5 (lower is better)
Translates to: RNSQHREKEIVREWKVSFIKLQH*ATLTSS
Trigger: AGAGGAAGTCAGAGTGGCCAAGTGTTGAAGCTTGAT...AAAGGAGACCTTCCATTCTCTGACAATTTCTTTCTCTCGATGCTGGGAATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672002.1
CDS CCA 72 bp GGCGCCATCATCCCTGCTGGCCTCGCCATCCGCGCCTaGGTCCGCGCGCCGCCGCCCGCCGCTCCTCAGAGA +
Preference number: 6 (lower is better)
Translates to: GAIIPAGLAIRA*VRAPPPAAPQR
Trigger: TCTCTGAGGAGCGGCGGGCGGCGGCGCGCGGACCCAGGCGCGGATGGCGAGGCCAGCAGGGATGATGGCGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000535270.5
ENST00000537064.5
ENST00000539357.1
ENST00000672742.1
CDS GCA 72 bp GTCTGCAGGGCAGGCCCCTTGGAAGACACCAGGGCGTaGCTCAGGACCTGCACACACCCCGGCTCCCGGGAG +
Preference number: 6 (lower is better)
Translates to: VCRAGPLEDTRA*LRTCTHPGSRE
Trigger: CTCCCGGGAGCCGGGGTGTGTGCAGGTCCTGAGGCACGCCCTGGTGTCTTCCAAGGGGCCTGCCCTGCAGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS CCA 72 bp GGTCCGCGCGCCGCCGCCCGCCGCTCCTCAGAGACATaGAGCCGTTGGCTACCACCTCTGCTTCAGGGGAGA +
Preference number: 6 (lower is better)
Translates to: GPRAAARRSSET*SRWLPPLLQGR
Trigger: TCTCCCCTGAAGCAGAGGTGGTAGCCAACGGCTCCATGTCTCTGAGGAGCGGCGGGCGGCGGCGCGCGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539357.1
ENST00000672742.1
CDS CCA 72 bp GCAGGCCTGAACGCCGTGCACCACCACACGGCAGCTTaGCGCGTCCCCCAGCCTCTGCTCAGATGCCCCTCG +
Preference number: 6 (lower is better)
Translates to: AGLNAVHHHTAA*RVPQPLLRCPS
Trigger: CGAGGGGCATCTGAGCAGAGGCTGGGGGACGCGCCAAGCTGCCGTGTGGTGGTGCACGGCGTTCAGGCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS CCA 72 bp GGCACTTCAGGCAGACCTGAAAGGGAGCAGCCCCGATaGGCGCCAGCCCTCCCGCGCTGGCCAGACCTGCCT +
Preference number: 6 (lower is better)
Translates to: GTSGRPEREQPR*APALPRWPDLP
Trigger: AGGCAGGTCTGGCCAGCGCGGGAGGGCTGGCGCCCATCGGGGCTGCTCCCTTTCAGGTCTGCCTGAAGTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS CAA 90 bp GGGTCCGCGCGCCGCCGCCCGCCGCTCCTCAGAGACATGGAGCCGTaGGCTACCACCTCTGCTTCAGGGGAGAAATTTGGCGCGCTCCCA +
Preference number: 6 (lower is better)
Translates to: GSARRRPPLLRDMEP*ATTSASGEKFGALP
Trigger: TGGGAGCGCGCCAAATTTCTCCCCTGAAGCAGAGGTGGTAGCCAACGGCTCCATGTCTCTGAGGAGCGGCGGGCGGCGGCGCGCGGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS TCA 72 bp CTGGTCTCCTTCACCCCGCGGCACTTCAGGCAGACCTaGAAGGGAGCAGCCCCGATGGGCGCCAGCCCTCCC +
Preference number: 6 (lower is better)
Translates to: LVSFTPRHFRQT*KGAAPMGASPP
Trigger: GGGAGGGCTGGCGCCCATCGGGGCTGCTCCCTTTCAGGTCTGCCTGAAGTGCCGCGGGGTGAAGGAGACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS GCA 72 bp GGCGCCAGCCCTCCCGCGCTGGCCAGACCTGCCTGCTaGTTCTTCACAGGCTCGCGAGACACATTCGTGGGC +
Preference number: 6 (lower is better)
Translates to: GASPPALARPAC*FFTGSRDTFVG
Trigger: GCCCACGAATGTGTCTCGCGAGCCTGTGAAGAAGCAGCAGGCAGGTCTGGCCAGCGCGGGAGGGCTGGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS CAA 72 bp TGCAGGCCTGAACGCCGTGCACCACCACACGGCAGCTaGGCGCGTCCCCCAGCCTCTGCTCAGATGCCCCTC +
Preference number: 6 (lower is better)
Translates to: CRPERRAPPHGS*ARPPASAQMPL
Trigger: GAGGGGCATCTGAGCAGAGGCTGGGGGACGCGCCAAGCTGCCGTGTGGTGGTGCACGGCGTTCAGGCCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS GCA 72 bp GGCCCCTTGGAAGACACCAGGGCGTGCCTCAGGACCTaGACACACCCCGGCTCCCGGGAGTGCACAGAAACC +
Preference number: 6 (lower is better)
Translates to: GPLEDTRACLRT*THPGSRECTET
Trigger: GGTTTCTGTGCACTCCCGGGAGCCGGGGTGTGTGCAGGTCCTGAGGCACGCCCTGGTGTCTTCCAAGGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS GCA 72 bp ACCACCACACGGCAGCTTGGCGCGTCCCCCAGCCTCTaGTCAGATGCCCCTCGGCAAGACCTTCCTGTGGCC +
Preference number: 6 (lower is better)
Translates to: TTTRQLGASPSL*SDAPRQDLPVA
Trigger: GGCCACAGGAAGGTCTTGCCGAGGGGCATCTGAGCAGAGGCTGGGGGACGCGCCAAGCTGCCGTGTGGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS GCA 72 bp AGACAGTCACCCCTCTCCGGGCCCTCCAGTGGAACATaGCTGGAGCCTGGAGAGGAGGCCCCTCGGCTCACA +
Preference number: 6 (lower is better)
Translates to: RQSPLSGPSSGT*LEPGEEAPRLT
Trigger: TGTGAGCCGAGGGGCCTCCTCTCCAGGCTCCAGGCATGTTCCACTGGAGGGCCCGGAGAGGGGTGACTGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416953.2
ENST00000544692.5
CDS GCA 72 bp AAGCGCCTGGTGACGGGCGAGTCTCCTGAGTGCAGCTaGACGCACTCTGGCCTCCCACCTGCACTTGAGCCC +
Preference number: 6 (lower is better)
Translates to: KRLVTGESPECS*THSGLPPALEP
Trigger: GGGCTCAAGTGCAGGTGGGAGGCCAGAGTGCGTGCAGCTGCACTCAGGAGACTCGCCCGTCACCAGGCGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541627.2
CDS TCA 72 bp TGTCTCTGGTTCTGGGGAGTAAGGGACCAGCCCAGCTaGGGACGCGGTGGACAGCCCAGGGAGGAGGAGCAC +
Preference number: 6 (lower is better)
Translates to: CLWFWGVRDQPS*GRGGQPREEEH
Trigger: GTGCTCCTCCTCCCTGGGCTGTCCACCGCGTCCTCAGCTGGGCTGGTCCCTTACTCCCCAGAACCAGAGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS GCA 72 bp CAAGGACACCAGCAGCTCCATTCCCGGCACTCGCTCTaGCCCAGGCTCGGTGCTCAGCGCTCACACACGTTG +
Preference number: 6 (lower is better)
Translates to: QGHQQLHSRHSL*PRLGAQRSHTL
Trigger: CAACGTGTGTGAGCGCTGAGCACCGAGCCTGGGGCAGAGCGAGTGCCGGGAATGGAGCTGCTGGTGTCCTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540987.1
CDS CCA 72 bp CCTCTCCGGGCCCTCCAGTGGAACATGCCTGGAGCCTaGAGAGGAGGCCCCTCGGCTCACAAAGTCCCAACT +
Preference number: 6 (lower is better)
Translates to: PLRALQWNMPGA*RGGPSAHKVPT
Trigger: AGTTGGGACTTTGTGAGCCGAGGGGCCTCCTCTCCAGGCTCCAGGCATGTTCCACTGGAGGGCCCGGAGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416953.2
ENST00000544692.5
CDS CCA 72 bp AGTCACCCCTCTCCGGGCCCTCCAGTGGAACATGCCTaGAGCCTGGAGAGGAGGCCCCTCGGCTCACAAAGT +
Preference number: 6 (lower is better)
Translates to: SHPSPGPPVEHA*SLERRPLGSQS
Trigger: ACTTTGTGAGCCGAGGGGCCTCCTCTCCAGGCTCCAGGCATGTTCCACTGGAGGGCCCGGAGAGGGGTGACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416953.2
ENST00000544692.5
CDS CCA 72 bp GCCGCCGCCCGCCGCTCCTCAGAGACATGGAGCCGTTaGCTACCACCTCTGCTTCAGGGGAGAAATTTGGCG +
Preference number: 6 (lower is better)
Translates to: AAARRSSETWSR*LPPLLQGRNLA
Trigger: CGCCAAATTTCTCCCCTGAAGCAGAGGTGGTAGCCAACGGCTCCATGTCTCTGAGGAGCGGCGGGCGGCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539357.1
ENST00000672742.1
CDS CAA 72 bp CGCCGCCGCCCGCCGCTCCTCAGAGACATGGAGCCGTaGGCTACCACCTCTGCTTCAGGGGAGAAATTTGGC +
Preference number: 6 (lower is better)
Translates to: RRRPPLLRDMEP*ATTSASGEKFG
Trigger: GCCAAATTTCTCCCCTGAAGCAGAGGTGGTAGCCAACGGCTCCATGTCTCTGAGGAGCGGCGGGCGGCGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539357.1
ENST00000672742.1
CDS TCA 72 bp CCACTGACTCCGTTCCAGGCGCTTGAGTGCCGAAACTaGGGAAGTGGCGCCATCATCCCTGCTGGCCTCGCC +
Preference number: 6 (lower is better)
Translates to: PLTPFQALECRN*GSGAIIPAGLA
Trigger: GGCGAGGCCAGCAGGGATGATGGCGCCACTTCCTCAGTTTCGGCACTCAAGCGCCTGGAACGGAGTCAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000535270.5
ENST00000537064.5
ENST00000539357.1
ENST00000672742.1
CDS GCA 72 bp AGGAGCCACCTCCTAAGTCGACATGGGAAGCGCCCCTaGACCACGCAACGCCCTCCCTCTCAAATGCTGCCC +
Preference number: 6 (lower is better)
Translates to: RSHLLSRHGKRP*TTQRPPSQMLP
Trigger: GGGCAGCATTTGAGAGGGAGGGCGTTGCGTGGTGCAGGGGCGCTTCCCATGTCGACTTAGGAGGTGGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS GCA 72 bp TGTGAGAAGCGCCTGGTGACGGGCGAGTCTCCTGAGTaGAGCTGCACGCACTCTGGCCTCCCACCTGCACTT +
Preference number: 6 (lower is better)
Translates to: CEKRLVTGESPE*SCTHSGLPPAL
Trigger: AAGTGCAGGTGGGAGGCCAGAGTGCGTGCAGCTGCACTCAGGAGACTCGCCCGTCACCAGGCGCTTCTCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541627.2
CDS GCA 72 bp GTGCGAGAGGTCACCAGCCCAGCCTCCAGACCACAGTaGCATGGGCAGGATCTCAGGAGAGGAAGGGGCTGT +
Preference number: 6 (lower is better)
Translates to: VREVTSPASRPQ*HGQDLRRGRGC
Trigger: ACAGCCCCTTCCTCTCCTGAGATCCTGCCCATGGCACTGTGGTCTGGAGGCTGGGCTGGTGACCTCTCGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541627.2
CDS CCA 72 bp CGAAGTCTCCCGCGCAGCTGCAGTACACAGGCATGCTaGTCTCCTTCACCCCGCGGCACTTCAGGCAGACCT +
Preference number: 6 (lower is better)
Translates to: RSLPRSCSTQAC*SPSPRGTSGRP
Trigger: AGGTCTGCCTGAAGTGCCGCGGGGTGAAGGAGACCAGCATGCCTGTGTACTGCAGCTGCGCGGGAGACTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS CCA 72 bp CAGCCGCTCCCCATGGAGTTTCCTGAGAGCAAAGGCTaGAGGGAAGACAGTCACCCCTCTCCGGGCCCTCCA +
Preference number: 6 (lower is better)
Translates to: QPLPMEFPESKG*REDSHPSPGPP
Trigger: TGGAGGGCCCGGAGAGGGGTGACTGTCTTCCCTCCAGCCTTTGCTCTCAGGAAACTCCATGGGGAGCGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544692.5
CDS CCA 72 bp CCTGGAGCACTGCGCCTCAGCCCGTCCTTCATGCAGTaGTACACGGCCACGATGTACGCTGTGGAGAGGCAC +
Preference number: 6 (lower is better)
Translates to: PGALRLSPSFMQ*YTATMYAVERH
Trigger: GTGCCTCTCCACAGCGTACATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544692.5
CDS TCA 72 bp ATCTCAGGAGAGGAAGGGGCTGTGAGAAGCGCCTGGTaGCGGGCGAGTCTCCTGAGTGCAGCTGCACGCACT +
Preference number: 6 (lower is better)
Translates to: ISGEEGAVRSAW*RASLLSAAART
Trigger: AGTGCGTGCAGCTGCACTCAGGAGACTCGCCCGTCACCAGGCGCTTCTCACAGCCCCTTCCTCTCCTGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541627.2
CDS GCA 72 bp CTGGAGAGGAGGCCCCTCGGCTCACAAAGTCCCAACTaGTGGGCAGGCTCCGCCCGATCTGATTTTCCCTGT +
Preference number: 6 (lower is better)
Translates to: LERRPLGSQSPN*WAGSARSDFPC
Trigger: ACAGGGAAAATCAGATCGGGCGGAGCCTGCCCAGCAGTTGGGACTTTGTGAGCCGAGGGGCCTCCTCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416953.2
ENST00000544692.5
CDS GCA 72 bp AAAGGGGCAGGAGAGGAGGTGCCACCTAGTGTTCTCTaGAGGATGTGCAGGCGACGCTGCAGCAGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: KGAGEEVPPSVL*RMCRRRCSSSC
Trigger: GCAGCTGCTGCTGCAGCGTCGCCTGCACATCCTGCAGAGAACACTAGGTGGCACCTCCTCTCCTGCCCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS GCA 72 bp TGCTCCCTGGAGCACTGCGCCTCAGCCCGTCCTTCATaGAGTGGTACACGGCCACGATGTACGCTGTGGAGA +
Preference number: 6 (lower is better)
Translates to: CSLEHCASARPS*SGTRPRCTLWR
Trigger: TCTCCACAGCGTACATCGTGGCCGTGTACCACTGCATGAAGGACGGGCTGAGGCGCAGTGCTCCAGGGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544692.5
CDS CCA 72 bp GAGAGGAGGCCCCTCGGCTCACAAAGTCCCAACTGCTaGGCAGGCTCCGCCCGATCTGATTTTCCCTGTCTC +
Preference number: 6 (lower is better)
Translates to: ERRPLGSQSPNC*AGSARSDFPCL
Trigger: GAGACAGGGAAAATCAGATCGGGCGGAGCCTGCCCAGCAGTTGGGACTTTGTGAGCCGAGGGGCCTCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416953.2
ENST00000544692.5
CDS CCA 72 bp GACCGTGGACTGCTGCCCGGGCCTCCACAAATGGCCTaGGTTGGAAAGAGGACAGACAAGCAAGTGGGCAGG +
Preference number: 6 (lower is better)
Translates to: DRGLLPGPPQMA*VGKRTDKQVGR
Trigger: CCTGCCCACTTGCTTGTCTGTCCTCTTTCCAACCCAGGCCATTTGTGGAGGCCCGGGCAGCAGTCCACGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS CCA 72 bp CCTTCATGCAGTGGTACACGGCCACGATGTACGCTGTaGAGAGGCACACACACCACAGGCCCTGAGTCGGGC +
Preference number: 6 (lower is better)
Translates to: PSCSGTRPRCTL*RGTHTTGPESG
Trigger: GCCCGACTCAGGGCCTGTGGTGTGTGTGCCTCTCCACAGCGTACATCGTGGCCGTGTACCACTGCATGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544692.5
CDS TCA 72 bp ACCCTGGAAAGCAGAGCTGTGTACGCGTCGCTGGCGTaGTCCTGCTCCCTGTTCTTCTTCACGGCAGGGGAG +
Preference number: 6 (lower is better)
Translates to: TLESRAVYASLA*SCSLFFFTAGE
Trigger: CTCCCCTGCCGTGAAGAAGAACAGGGAGCAGGATCACGCCAGCGACGCGTACACAGCTCTGCTTTCCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS GCA 72 bp GGAGAGGAGGTGCCACCTAGTGTTCTCTGCAGGATGTaGAGGCGACGCTGCAGCAGCAGCTGCGTGTTTCTC +
Preference number: 6 (lower is better)
Translates to: GEEVPPSVLCRM*RRRCSSSCVFL
Trigger: GAGAAACACGCAGCTGCTGCTGCAGCGTCGCCTGCACATCCTGCAGAGAACACTAGGTGGCACCTCCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS GCA 72 bp GAAGCCTATCTCCTGCTGCATGCTCAGACCGTGGACTaGTGCCCGGGCCTCCACAAATGGCCTGGGTTGGAA +
Preference number: 6 (lower is better)
Translates to: EAYLLLHAQTVD*CPGLHKWPGLE
Trigger: TTCCAACCCAGGCCATTTGTGGAGGCCCGGGCAGCAGTCCACGGTCTGAGCATGCAGCAGGAGATAGGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS CCA 72 bp GCCTCTGCTCAGATGCCCCTCGGCAAGACCTTCCTGTaGCCGAGCTGTGCAACTCCCTCTTCCTCCTTTCCT +
Preference number: 6 (lower is better)
Translates to: ASAQMPLGKTFL*PSCATPSSSFP
Trigger: AGGAAAGGAGGAAGAGGGAGTTGCACAGCTCGGCCACAGGAAGGTCTTGCCGAGGGGCATCTGAGCAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000534922.5
ENST00000538196.1
ENST00000541627.2
CDS TCA 72 bp ACACTGGAAAGCAGAGCTGTGTACGCGTCGCTGGCGTaGTCCTGCTCCCTGTTCTTCTTCACGGCAGGGGAG +
Preference number: 6 (lower is better)
Translates to: TLESRAVYASLA*SCSLFFFTAGE
Trigger: CTCCCCTGCCGTGAAGAAGAACAGGGAGCAGGATCACGCCAGCGACGCGTACACAGCTCTGCTTTCCAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000535270.5
ENST00000537064.5
CDS GCA 72 bp CGTGGGCCCATCAGTAAGCCTCGAGCCCCTGCTGTGTaGAGCCAGCCCTCGGTTATGAGTAAAATGCACGAC +
Preference number: 6 (lower is better)
Translates to: RGPISKPRAPAV*SQPSVMSKMHD
Trigger: GTCGTGCATTTTACTCATAACCGAGGGCTGGCTGCACACAGCAGGGGCTCGAGGCTTACTGATGGGCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS CCA 72 bp GATGACCCCAGGCGCTTGAACTCAGCGATGAGCCTGTaGAGCAAGTTGAGAGTCCGTGGTGGAGACGCCACA +
Preference number: 6 (lower is better)
Translates to: DDPRRLNSAMSL*SKLRVRGGDAT
Trigger: TGTGGCGTCTCCACCACGGACTCTCAACTTGCTCCACAGGCTCATCGCTGAGTTCAAGCGCCTGGGGTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS CCA 72 bp GAAGAGAGGAAAGAGAAACTCCGGCCGGCTGGAGAGTaGCCTGAGCAGTGGAGGCCTGAGCAGTTCCAGTGT +
Preference number: 6 (lower is better)
Translates to: EERKEKLRPAGE*PEQWRPEQFQC
Trigger: ACACTGGAACTGCTCAGGCCTCCACTGCTCAGGCCACTCTCCAGCCGGCCGGAGTTTCTCTTTCCTCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536445.5
CDS CCA 72 bp GTGTGTGGATTCCCACTCGAAAGGGGAGGGTACAGCTaGAGGTCGGAACGGCTTGGTTGCTCCCATTCCTGG +
Preference number: 6 (lower is better)
Translates to: VCGFPLERGGYS*RSERLGCSHSW
Trigger: CCAGGAATGGGAGCAACCAAGCCGTTCCGACCTCCAGCTGTACCCTCCCCTTTCGAGTGGGAATCCACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS CCA 72 bp GCAAGACCCTGGAAAGCAGAGCTGTGTACGCGTCGCTaGCGTGATCCTGCTCCCTGTTCTTCTTCACGGCAG +
Preference number: 6 (lower is better)
Translates to: ARPWKAELCTRR*RDPAPCSSSRQ
Trigger: CTGCCGTGAAGAAGAACAGGGAGCAGGATCACGCCAGCGACGCGTACACAGCTCTGCTTTCCAGGGTCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672742.1
CDS CAA 90 bp CTTGAGCCATTTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTGCTaGGAAAATGGCAAGTGGGATGGCCCTCTCCGTGACAGGGGAGCC +
Preference number: 6 (lower is better)
Translates to: LEPFPEKVLPHRGLC*ENGKWDGPLRDRGA
Trigger: GGCTCCCCTGTCACGGAGAGGGCCATCCCACTTGCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATGGCTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000535270.5
ENST00000536445.5
CDS TCA 72 bp CCATCTTATCCGTCCACTGACTCCGTTCCAGGCGCTTaGGTGCCGAAACTGAGGAAGTGGCGCCATCATCCC +
Preference number: 6 (lower is better)
Translates to: PSYPSTDSVPGA*VPKLRKWRHHP
Trigger: GGGATGATGGCGCCACTTCCTCAGTTTCGGCACTCAAGCGCCTGGAACGGAGTCAGTGGACGGATAAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320574.10
ENST00000535270.5
ENST00000537064.5
ENST00000539357.1
ENST00000672742.1
CDS TCA 72 bp GCAGGCGGCATGCACGACTCACCAGGTCCTGCAGGGTaGAGGCCATCAGCTTCTTCTGTAGAACTTCCACCA +
Preference number: 6 (lower is better)
Translates to: AGGMHDSPGPAG*RPSASSVELPP
Trigger: TGGTGGAAGTTCTACAGAAGAAGCTGATGGCCTTCACCCTGCAGGACCTGGTGAGTCGTGCATGCCGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS TCA 72 bp GGGCCATGTACACTAAGCCTCTCACTGGGTAGCGCGTaGAAGACAGCTCCCAACACAAGCAAAGGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: GPCTLSLSLGSA*KTAPNTSKGRA
Trigger: GGCCCTGCCTTTGCTTGTGTTGGGAGCTGTCTTTCACGCGCTACCCAGTGAGAGGCTTAGTGTACATGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544692.5
CDS GCA 72 bp CCACCTAGTGTTCTCTGCAGGATGTGCAGGCGACGCTaGAGCAGCAGCTGCGTGTTTCTCTGGGATCCTTTG +
Preference number: 6 (lower is better)
Translates to: PPSVLCRMCRRR*SSSCVFLWDPL
Trigger: CAAAGGATCCCAGAGAAACACGCAGCTGCTGCTGCAGCGTCGCCTGCACATCCTGCAGAGAACACTAGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS GCA 72 bp TCGGTTATGAGTAAAATGCACGACCTCATCCCACGGTaGCAGCGCCTTCCCTACACCCACCCTCGCTGTGGA +
Preference number: 6 (lower is better)
Translates to: SVMSKMHDLIPR*QRLPYTHPRCG
Trigger: TCCACAGCGAGGGTGGGTGTAGGGAAGGCGCTGGCACCGTGGGATGAGGTCGTGCATTTTACTCATAACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS CCA 72 bp GCAGAACACTGGAAAGCAGAGCTGTGTACGCGTCGCTaGCGTGATCCTGCTCCCTGTTCTTCTTCACGGCAG +
Preference number: 6 (lower is better)
Translates to: AEHWKAELCTRR*RDPAPCSSSRQ
Trigger: CTGCCGTGAAGAAGAACAGGGAGCAGGATCACGCCAGCGACGCGTACACAGCTCTGCTTTCCAGTGTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000535270.5
ENST00000537064.5
CDS CAA 72 bp AGGCGCTTGAACTCAGCGATGAGCCTGTGGAGCAAGTaGAGAGTCCGTGGTGGAGACGCCACAGTCATGGAG +
Preference number: 6 (lower is better)
Translates to: RRLNSAMSLWSK*RVRGGDATVME
Trigger: CTCCATGACTGTGGCGTCTCCACCACGGACTCTCAACTTGCTCCACAGGCTCATCGCTGAGTTCAAGCGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS CAA 90 bp TGTCTGCCTCCTTCCGCTAGAACGAAGCACCCACAAGGCCAGCTCTaGACCCAAGGCAGGTGCTCAACCAGTGTGGACAGAACAGTCCAT +
Preference number: 6 (lower is better)
Translates to: CLPPSARTKHPQGQL*TQGRCSTSVDRTVH
Trigger: ATGGACTGTTCTGTCCACACTGGTTGAGCACCTGCCTTGGGTCAAGAGCTGGCCTTGTGGGTGCTTCGTTCTAGCGGAAGGAGGCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS TCA 72 bp ACAAAGTCCCAACTGCTGGGCAGGCTCCGCCCGATCTaGTTTTCCCTGTCTCCCTTCTTGCGATACCATGGC +
Preference number: 6 (lower is better)
Translates to: TKSQLLGRLRPI*FSLSPFLRYHG
Trigger: GCCATGGTATCGCAAGAAGGGAGACAGGGAAAATCAGATCGGGCGGAGCCTGCCCAGCAGTTGGGACTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416953.2
ENST00000544692.5
CDS TCA 72 bp ACATCTCTGAGAGCTCAGTGGAGTTCCGAGAGCCTGTaGCTTTCTTCTGAATCGGGAAGGGCTCCGACCGCC +
Preference number: 6 (lower is better)
Translates to: TSLRAQWSSESL*LSSESGRAPTA
Trigger: GGCGGTCGGAGCCCTTCCCGATTCAGAAGAAAGTCACAGGCTCTCGGAACTCCACTGAGCTCTCAGAGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441786.3
CDS TCA 72 bp CTCCATGTCAGGAGCACTTGGCCTCGGACTGTCTTCTaGGGCCTCGGCCATCGTGACCTGAAATGGGATGTT +
Preference number: 6 (lower is better)
Translates to: LHVRSTWPRTVF*GLGHRDLKWDV
Trigger: AACATCCCATTTCAGGTCACGATGGCCGAGGCCTCAGAAGACAGTCCGAGGCCAAGTGCTCCTGACATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503265.4
CDS TCA 72 bp CTTCCGCTAGAACGAAGCACCCACAAGGCCAGCTCTTaGCCCAAGGCAGGTGCTCAACCAGTGTGGACAGAA +
Preference number: 6 (lower is better)
Translates to: LPLERSTHKASS*PKAGAQPVWTE
Trigger: TTCTGTCCACACTGGTTGAGCACCTGCCTTGGGTCAAGAGCTGGCCTTGTGGGTGCTTCGTTCTAGCGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS GCA 72 bp CCATTTCCGGAGAAAGTGCTTCCTCACCGTGGGCTCTaGTTGGAAAATGGCAAGTGGGATGGCCCTCTCCGT +
Preference number: 6 (lower is better)
Translates to: PFPEKVLPHRGL*LENGKWDGPLR
Trigger: ACGGAGAGGGCCATCCCACTTGCCATTTTCCAAGCAGAGCCCACGGTGAGGAAGCACTTTCTCCGGAAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320574.10
ENST00000535270.5
ENST00000536445.5
CDS GCA 72 bp TCAGGATTCATCCCGAGTTACAACACCTCTGAGGCCTaGAAGAGGGCTACGCCCCAGCAATTACCCCACGGA +
Preference number: 6 (lower is better)
Translates to: SGFIPSYNTSEA*KRATPQQLPHG
Trigger: TCCGTGGGGTAATTGCTGGGGCGTAGCCCTCTTGCAGGCCTCAGAGGTGTTGTAACTCGGGATGAATCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS GCA 72 bp GCCCCTGCACCACGCAACGCCCTCCCTCTCAAATGCTaGCCAGTTACTCATAGAGAAGACACAGACTCACCA +
Preference number: 6 (lower is better)
Translates to: APAPRNALPLKC*PVTHREDTDSP
Trigger: TGGTGAGTCTGTGTCTTCTCTATGAGTAACTGGGCAGCATTTGAGAGGGAGGGCGTTGCGTGGTGCAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS GCA 72 bp AAGCACCCACAAGGCCAGCTCTTGACCCAAGGCAGGTaGTCAACCAGTGTGGACAGAACAGTCCATCAGGCT +
Preference number: 6 (lower is better)
Translates to: KHPQGQLLTQGR*STSVDRTVHQA
Trigger: AGCCTGATGGACTGTTCTGTCCACACTGGTTGAGCACCTGCCTTGGGTCAAGAGCTGGCCTTGTGGGTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534922.5
ENST00000541627.2
CDS TCA 72 bp AGAAAGTTAGGCCTCACAGACCAGCCAGGGGGCAGCTaGCCTGACCCAGGGCTTTATCTTCAGCTACTGAAC +
Preference number: 6 (lower is better)
Translates to: RKLGLTDQPGGS*PDPGLYLQLLN
Trigger: GTTCAGTAGCTGAAGATAAAGCCCTGGGTCAGGTCAGCTGCCCCCTGGCTGGTCTGTGAGGCCTAACTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544692.5
CDS GCA 72 bp GGCTCCGCCCGATCTGATTTTCCCTGTCTCCCTTCTTaGGATACCATGGCACAGGAGCCACATCTACTAACC +
Preference number: 6 (lower is better)
Translates to: GSARSDFPCLPS*DTMAQEPHLLT
Trigger: GGTTAGTAGATGTGGCTCCTGTGCCATGGTATCGCAAGAAGGGAGACAGGGAAAATCAGATCGGGCGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416953.2
ENST00000544692.5
CDS GCA 72 bp CTCTGCAGGATGTGCAGGCGACGCTGCAGCAGCAGCTaGGTGTTTCTCTGGGATCCTTTGGATTGTTATGCT +
Preference number: 6 (lower is better)
Translates to: LCRMCRRRCSSS*VFLWDPLDCYA
Trigger: AGCATAACAATCCAAAGGATCCCAGAGAAACACGCAGCTGCTGCTGCAGCGTCGCCTGCACATCCTGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS CCA 72 bp TCTCTAACCAATGCCACTTGGTTTGTCCCCGCAACATaGACCTCGCGGGCAGACAAGCTCATCGTGACAAGG +
Preference number: 6 (lower is better)
Translates to: SLTNATWFVPAT*TSRADKLIVTR
Trigger: CCTTGTCACGATGAGCTTGTCTGCCCGCGAGGTCCATGTTGCGGGGACAAACCAAGTGGCATTGGTTAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540987.1
CDS CCA 72 bp CGGAGACAGAGTTCACAATCTCTAACCAATGCCACTTaGTTTGTCCCCGCAACATGGACCTCGCGGGCAGAC +
Preference number: 6 (lower is better)
Translates to: RRQSSQSLTNAT*FVPATWTSRAD
Trigger: GTCTGCCCGCGAGGTCCATGTTGCGGGGACAAACCAAGTGGCATTGGTTAGAGATTGTGAACTCTGTCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540987.1
CDS TCA 72 bp AAGTGTCCACAAGGGGCCTCTGTGGGGCCGCTCTGGTaGAGTCCATCAAATCAGGATTCATCCCGAGTTACA +
Preference number: 6 (lower is better)
Translates to: KCPQGASVGPLW*SPSNQDSSRVT
Trigger: TGTAACTCGGGATGAATCCTGATTTGATGGACTTCACCAGAGCGGCCCCACAGAGGCCCCTTGTGGACACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS TCA 72 bp CGTTTCCCTCAGAGTTGTGTCCCTGGATGCAGAAGTTaGGGGGAACTCCAAGGGGGTAATTGTGCTCAGGAG +
Preference number: 6 (lower is better)
Translates to: RFPQSCVPGCRS*GELQGGNCAQE
Trigger: CTCCTGAGCACAATTACCCCCTTGGAGTTCCCCTCAACTTCTGCATCCAGGGACACAACTCTGAGGGAAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536445.5
CDS TCA 72 bp GGACTGTGCTCCTCTAGGCCATGCCCTTCTCTAGCCTaGGACGCAGAAGGCTGCAATTTCAAGAGCTCTCTA +
Preference number: 6 (lower is better)
Translates to: GLCSSRPCPSLA*DAEGCNFKSSL
Trigger: TAGAGAGCTCTTGAAATTGCAGCCTTCTGCGTCTCAGGCTAGAGAAGGGCATGGCCTAGAGGAGCACAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536445.5
CDS TCA 72 bp TGTTCCATGAAGACCTGCAGGAATAAACAGGCACAGTaGGACCCCAGTCCACTCAGAGAGGAGGCCAAGGAG +
Preference number: 6 (lower is better)
Translates to: CSMKTCRNKQAQ*DPSPLREEAKE
Trigger: CTCCTTGGCCTCCTCTCTGAGTGGACTGGGGTCTCACTGTGCCTGTTTATTCCTGCAGGTCTTCATGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534922.5
CDS TCA 72 bp CTCCGCCCGTCTCTGGCAGAAAAGACGGTCATACCCTaGGAACAAAGCTCATGGAGCTGCAATTCTGATCTG +
Preference number: 6 (lower is better)
Translates to: LRPSLAEKTVIP*EQSSWSCNSDL
Trigger: CAGATCAGAATTGCAGCTCCATGAGCTTTGTTCTCAGGGTATGACCGTCTTTTCTGCCAGAGACGGGCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS GCA 72 bp AGGGCTACGCCCCAGCAATTACCCCACGGATCTATCTaGATGAGCTCATGCATGAAGCCTCTCACTGATTTG +
Preference number: 6 (lower is better)
Translates to: RATPQQLPHGSI*MSSCMKPLTDL
Trigger: CAAATCAGTGAGAGGCTTCATGCATGAGCTCATGCAGATAGATCCGTGGGGTAATTGCTGGGGCGTAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS GCA 72 bp ATTCCTGGGTGGGAGAAGGACCTAGTGCTTACAGGATaGATGTTAATGAGCCAGCCTGTCTTCTCACCAGGC +
Preference number: 6 (lower is better)
Translates to: IPGWEKDLVLTG*MLMSQPVFSPG
Trigger: GCCTGGTGAGAAGACAGGCTGGCTCATTAACATGCATCCTGTAAGCACTAGGTCCTTCTCCCACCCAGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539357.1
CDS GCA 72 bp AGGGGAGGGTACAGCTGGAGGTCGGAACGGCTTGGTTaGTCCCATTCCTGGACTAACTCATTATTCACTCAA +
Preference number: 6 (lower is better)
Translates to: RGGYSWRSERLG*SHSWTNSLFTQ
Trigger: TTGAGTGAATAATGAGTTAGTCCAGGAATGGGAGCAACCAAGCCGTTCCGACCTCCAGCTGTACCCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS GCA 72 bp GCCAAGAAATGGCGTTCCCACCCTGCCCACACACTCTaGCTAGAGATTCTCACTACAAAGAAGTCCACAGCA +
Preference number: 6 (lower is better)
Translates to: AKKWRSHPAHTL*LEILTTKKSTA
Trigger: TGCTGTGGACTTCTTTGTAGTGAGAATCTCTAGGCAGAGTGTGTGGGCAGGGTGGGAACGCCATTTCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS CAA 72 bp TCGAAAGGGGAGGGTACAGCTGGAGGTCGGAACGGCTaGGTTGCTCCCATTCCTGGACTAACTCATTATTCA +
Preference number: 6 (lower is better)
Translates to: SKGEGTAGGRNG*VAPIPGLTHYS
Trigger: TGAATAATGAGTTAGTCCAGGAATGGGAGCAACCAAGCCGTTCCGACCTCCAGCTGTACCCTCCCCTTTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS CAA 90 bp GACCATGATGGTGGGTTTGGTCTCCTGGACGTGTTCAAACCACCTTaGGATCAGATGAGCCTGAACCCAAGTCACAGCAGTCAGAGGTCT +
Preference number: 6 (lower is better)
Translates to: DHDGGFGLLDVFKPP*DQMSLNPSHSSQRS
Trigger: AGACCTCTGACTGCTGTGACTTGGGTTCAGGCTCATCTGATCCAAAGGTGGTTTGAACACGTCCAGGAGACCAAACCCACCATCATGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS CAA 90 bp AAAGAGCCTACGGAGACAGAGTTCACAATCTCTAACCAATGCCACTaGGTTTGTCCCCGCAACATGGACCTCGCGGGCAGACAAGCTCAT +
Preference number: 6 (lower is better)
Translates to: KEPTETEFTISNQCH*VCPRNMDLAGRQAH
Trigger: ATGAGCTTGTCTGCCCGCGAGGTCCATGTTGCGGGGACAAACCAAGTGGCATTGGTTAGAGATTGTGAACTCTGTCTCCGTAGGCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540987.1
CDS TCA 72 bp TCAAAACCAAACCGCAAATCCATCTTATCCGTCCACTaGCTCCGTTCCAGGCGCTTGAGTGCCGAAACTGAG +
Preference number: 6 (lower is better)
Translates to: SKPNRKSILSVH*LRSRRLSAETE
Trigger: CTCAGTTTCGGCACTCAAGCGCCTGGAACGGAGTCAGTGGACGGATAAGATGGATTTGCGGTTTGGTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320574.10
ENST00000535270.5
ENST00000537064.5
ENST00000539357.1
ENST00000539618.1
ENST00000672742.1
CDS CCA 72 bp CGCTATGACCAGAAGGGTTGCAGCCATATTCCTGGGTaGGAGAAGGACCTAGTGCTTACAGGATGCATGTTA +
Preference number: 6 (lower is better)
Translates to: RYDQKGCSHIPG*EKDLVLTGCML
Trigger: TAACATGCATCCTGTAAGCACTAGGTCCTTCTCCCACCCAGGAATATGGCTGCAACCCTTCTGGTCATAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539357.1
CDS CCA 72 bp GCTGCAAACACCCTAGAATCTGAGGGGACCCATGGCTaGTCAGATTGCCTCACAGATGAGGCTAAAATGTCA +
Preference number: 6 (lower is better)
Translates to: AANTLESEGTHG*SDCLTDEAKMS
Trigger: TGACATTTTAGCCTCATCTGTGAGGCAATCTGACCAGCCATGGGTCCCCTCAGATTCTAGGGTGTTTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544692.5
CDS TCA 72 bp TCCTGTAAGGAGTGCTGGGCTCATGAATATTCTGTGTaGTACCCTGGTGCTCCCTTGCTCGTGTGTTTCACT +
Preference number: 6 (lower is better)
Translates to: SCKECWAHEYSV*YPGAPLLVCFT
Trigger: AGTGAAACACACGAGCAAGGGAGCACCAGGGTATCACACAGAATATTCATGAGCCCAGCACTCCTTACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536445.5
CDS TCA 72 bp CATACCCTGAGAACAAAGCTCATGGAGCTGCAATTCTaGTCTGACGGAATGCCTGAGGCCTTGGAAAGATCC +
Preference number: 6 (lower is better)
Translates to: HTLRTKLMELQF*SDGMPEALERS
Trigger: GGATCTTTCCAAGGCCTCAGGCATTCCGTCAGATCAGAATTGCAGCTCCATGAGCTTTGTTCTCAGGGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS GCA 72 bp CAAAGCTCATGGAGCTGCAATTCTGATCTGACGGAATaGCTGAGGCCTTGGAAAGATCCACATGTCCGTTCT +
Preference number: 6 (lower is better)
Translates to: QSSWSCNSDLTE*LRPWKDPHVRS
Trigger: AGAACGGACATGTGGATCTTTCCAAGGCCTCAGGCATTCCGTCAGATCAGAATTGCAGCTCCATGAGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS CCA 72 bp ACAAACTCAGAAATACACTACTTATCCCAGAGGCACTaGCTGGCCATGTCTCTGGTTCTGGGGAGTAAGGGA +
Preference number: 6 (lower is better)
Translates to: TNSEIHYLSQRH*LAMSLVLGSKG
Trigger: TCCCTTACTCCCCAGAACCAGAGACATGGCCAGCCAGTGCCTCTGGGATAAGTAGTGTATTTCTGAGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS CCA 72 bp AGCTGCAATTCTGATCTGACGGAATGCCTGAGGCCTTaGAAAGATCCACATGTCCGTTCTTCCCACAATACC +
Preference number: 6 (lower is better)
Translates to: SCNSDLTECLRP*KDPHVRSSHNT
Trigger: GGTATTGTGGGAAGAACGGACATGTGGATCTTTCCAAGGCCTCAGGCATTCCGTCAGATCAGAATTGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS GCA 72 bp AGAGTGTTCCAGTATTCCTTCTACCCAAGACGCCTGTaGCTGGGAAACATATGCACCGAGATATCTCGTTCA +
Preference number: 6 (lower is better)
Translates to: RVFQYSFYPRRL*LGNICTEISRS
Trigger: TGAACGAGATATCTCGGTGCATATGTTTCCCAGGCACAGGCGTCTTGGGTAGAAGGAATACTGGAACACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536445.5
CDS CCA 72 bp TGTTCCAGTATTCCTTCTACCCAAGACGCCTGTGCCTaGGAAACATATGCACCGAGATATCTCGTTCAATGC +
Preference number: 6 (lower is better)
Translates to: CSSIPSTQDACA*ETYAPRYLVQC
Trigger: GCATTGAACGAGATATCTCGGTGCATATGTTTCCCAGGCACAGGCGTCTTGGGTAGAAGGAATACTGGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536445.5
CDS CAA 90 bp CACGGATCTATCTGCATGAGCTCATGCATGAAGCCTCTCACTGATTaGCTATTTGTAACAACGGCACAAGGCTGGAGAGAGGCTAAATGT +
Preference number: 6 (lower is better)
Translates to: HGSICMSSCMKPLTD*LFVTTAQGWREAKC
Trigger: ACATTTAGCCTCTCTCCAGCCTTGTGCCGTTGTTACAAATAGCAAATCAGTGAGAGGCTTCATGCATGAGCTCATGCAGATAGATCCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS TCA 72 bp TTCCCAAGTGATACCTCCTTACCTCATCGGGTTCATTaGAGACACAAAAGGGGCCTTCATATTCTGGCTTGG +
Preference number: 6 (lower is better)
Translates to: FPSDTSLPHRVH*RHKRGLHILAW
Trigger: CCAAGCCAGAATATGAAGGCCCCTTTTGTGTCTTCAATGAACCCGATGAGGTAAGGAGGTATCACTTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535934.2
CDS GCA 72 bp CCCTTGCTCGTGTGTTTCACTCTATACAAGACAATATaGCAAGAAACAGAAGCCCACACAGCAAAGCAAGCC +
Preference number: 6 (lower is better)
Translates to: PLLVCFTLYKTI*QETEAHTAKQA
Trigger: GGCTTGCTTTGCTGTGTGGGCTTCTGTTTCTTGGCATATTGTCTTGTATAGAGTGAAACACACGAGCAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536445.5
CDS CCA 72 bp AACCCACCAAGTGATTTGGCAAGTCCAGATCCTCTTTaGGGACAGTCTCCACTTTTGCAATTTTGCCCTGAA +
Preference number: 6 (lower is better)
Translates to: NPPSDLASPDPL*GQSPLLQFCPE
Trigger: TTCAGGGCAAAATTGCAAAAGTGGAGACTGTCCCCAAAGAGGATCTGGACTTGCCAAATCACTTGGTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320574.10
ENST00000535270.5
ENST00000537064.5
ENST00000672742.1
CDS CAA 72 bp ATCTGCATGAGCTCATGCATGAAGCCTCTCACTGATTaGCTATTTGTAACAACGGCACAAGGCTGGAGAGAG +
Preference number: 6 (lower is better)
Translates to: ICMSSCMKPLTD*LFVTTAQGWRE
Trigger: CTCTCTCCAGCCTTGTGCCGTTGTTACAAATAGCAAATCAGTGAGAGGCTTCATGCATGAGCTCATGCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS TCA 72 bp ATCTATCTGCATGAGCTCATGCATGAAGCCTCTCACTaGTTTGCTATTTGTAACAACGGCACAAGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: IYLHELMHEASH*FAICNNGTRLE
Trigger: CTCCAGCCTTGTGCCGTTGTTACAAATAGCAAATCAGTGAGAGGCTTCATGCATGAGCTCATGCAGATAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS GCA 72 bp ACCCTAGAATCTGAGGGGACCCATGGCTGGTCAGATTaGCTCACAGATGAGGCTAAAATGTCATTGTTAATA +
Preference number: 6 (lower is better)
Translates to: TLESEGTHGWSD*LTDEAKMSLLI
Trigger: TATTAACAATGACATTTTAGCCTCATCTGTGAGGCAATCTGACCAGCCATGGGTCCCCTCAGATTCTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544692.5
CDS CAA 72 bp CTTATCACGCTATTTAGAAAAACGTTTCCCTCAGAGTaGTGTCCCTGGATGCAGAAGTTGAGGGGAACTCCA +
Preference number: 6 (lower is better)
Translates to: LITLFRKTFPSE*CPWMQKLRGTP
Trigger: TGGAGTTCCCCTCAACTTCTGCATCCAGGGACACAACTCTGAGGGAAACGTTTTTCTAAATAGCGTGATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536445.5
CDS TCA 72 bp TCGATACACTTCATCTGCACACTAACCTGCATAGCTTaGTTTGCAAACTCTAAGCCTGCAGACCCAAACCAA +
Preference number: 6 (lower is better)
Translates to: SIHFICTLTCIA*FANSKPADPNQ
Trigger: TTGGTTTGGGTCTGCAGGCTTAGAGTTTGCAAATCAAGCTATGCAGGTTAGTGTGCAGATGAAGTGTATCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544692.5
CDS GCA 72 bp CAGCAATTACCCCACGGATCTATCTGCATGAGCTCATaGATGAAGCCTCTCACTGATTTGCTATTTGTAACA +
Preference number: 6 (lower is better)
Translates to: QQLPHGSICMSS*MKPLTDLLFVT
Trigger: TGTTACAAATAGCAAATCAGTGAGAGGCTTCATGCATGAGCTCATGCAGATAGATCCGTGGGGTAATTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS GCA 72 bp CTCATGAATATTCTGTGTGATACCCTGGTGCTCCCTTaGTCGTGTGTTTCACTCTATACAAGACAATATGCC +
Preference number: 6 (lower is better)
Translates to: LMNILCDTLVLP*SCVSLYTRQYA
Trigger: GGCATATTGTCTTGTATAGAGTGAAACACACGAGCAAGGGAGCACCAGGGTATCACACAGAATATTCATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536445.5
CDS CAA 72 bp CAGCAGCAGCTGCGTGTTTCTCTGGGATCCTTTGGATaGTTATGCTCCACAAACTCAGAAATACACTACTTA +
Preference number: 6 (lower is better)
Translates to: QQQLRVSLGSFG*LCSTNSEIHYL
Trigger: TAAGTAGTGTATTTCTGAGTTTGTGGAGCATAACAATCCAAAGGATCCCAGAGAAACACGCAGCTGCTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS TCA 72 bp TGTTCTTTCATATGGCATGTCCTCACACAGATCTCCTaGCACAGGCATATTTTCACTAAAACAACAAGGCAC +
Preference number: 6 (lower is better)
Translates to: CSFIWHVLTQIS*HRHIFTKTTRH
Trigger: GTGCCTTGTTGTTTTAGTGAAAATATGCCTGTGTCAGGAGATCTGTGTGAGGACATGCCATATGAAAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541213.5
CDS GCA 72 bp GCCTGGGAAACATATGCACCGAGATATCTCGTTCAATaGAACACCATTGATAACAATGGAAATGTGAAACCT +
Preference number: 6 (lower is better)
Translates to: AWETYAPRYLVQ*NTIDNNGNVKP
Trigger: AGGTTTCACATTTCCATTGTTATCAATGGTGTTGCATTGAACGAGATATCTCGGTGCATATGTTTCCCAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536445.5
CDS CAA 72 bp TCCCTGCAACTTGTTTCTTTATTCAGCCATGTATTTTaGAGACTGACACCGGGTGAAACATGCACATATGGT +
Preference number: 6 (lower is better)
Translates to: SLQLVSLFSHVF*RLTPGETCTYG
Trigger: ACCATATGTGCATGTTTCACCCGGTGTCAGTCTCAAAAATACATGGCTGAATAAAGAAACAAGTTGCAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503265.4
CDS TCA 72 bp ATCAGCCTACCTACCCATGACTTTGCAAATGAAGAATaGCAAGCGCCTACTTTTTCAAAACTACAAACTGTG +
Preference number: 6 (lower is better)
Translates to: ISLPTHDFANEE*QAPTFSKLQTV
Trigger: CACAGTTTGTAGTTTTGAAAAAGTAGGCGCTTGTCATTCTTCATTTGCAAAGTCATGGGTAGGTAGGCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503265.4
CDS GCA 72 bp AGCCATGTATTTTTGAGACTGACACCGGGTGAAACATaGACATATGGTTCGTTCATTGTAACTGATGTGAAA +
Preference number: 6 (lower is better)
Translates to: SHVFLRLTPGET*TYGSFIVTDVK
Trigger: TTTCACATCAGTTACAATGAACGAACCATATGTGCATGTTTCACCCGGTGTCAGTCTCAAAAATACATGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503265.4
CDS CAA 72 bp TATCATATAAACACATCAGCCTACCTACCCATGACTTaGCAAATGAAGAATGACAAGCGCCTACTTTTTCAA +
Preference number: 6 (lower is better)
Translates to: YHINTSAYLPMT*QMKNDKRLLFQ
Trigger: TTGAAAAAGTAGGCGCTTGTCATTCTTCATTTGCAAAGTCATGGGTAGGTAGGCTGATGTGTTTATATGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503265.4