RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POLDIP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000100227

Ensembl transcript IDs: ENST00000252115.10, ENST00000339677.10, ENST00000348657.6, ENST00000445215.5, ENST00000451060.6, ENST00000454057.1, ENST00000463133.1, ENST00000491021.1, ENST00000617178.4

Found 749 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCCACTGACAAGACAGAGGAGCGGCACAGCTCTCAGGCCGACCTaGCTCCCGTCAGGACACCAGGGCTCTCCATCCCCTCCATTGTTT +
Preference number: 1 (lower is better)
Translates to: PPLTRQRSGTALRPT*LPSGHQGSPSPPLF
Trigger: AAACAATGGAGGGGATGGAGAGCCCTGGTGTCCTGACGGGAGCCAGGTCGGCCTGAGAGCTGTGCCGCTCCTCTGTCTTGTCAGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR TCA 90 bp CTGGCGGCTACACAAAACCAGGGTGTGGTTAAGTGCCAGGCGAGGTaGGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGAC +
Preference number: 1 (lower is better)
Translates to: LAATQNQGVVKCQAR*EPGGLTTQPPPSKD
Trigger: GTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAACCACACCCTGGTTTTGTGTAGCCGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR CCA 90 bp AAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTaGTTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACAC +
Preference number: 1 (lower is better)
Translates to: KAQPEESWRLHKTRV*LSARRGENREGSQH
Trigger: GTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR TCA 90 bp ACAGTGCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTaGCCACTGTCCTGTAGACAACTGAGGCCAGAAATGGAGAGCCAG +
Preference number: 1 (lower is better)
Translates to: TVPLGGSWIYASRHP*PLSCRQLRPEMESQ
Trigger: CTGGCTCTCCATTTCTGGCCTCAGTTGTCTACAGGACAGTGGTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR CCA 90 bp AACACAGAAAGGCGGGTCCCATCCAGTGAGGAAGCTCTTTATCCCTaGCAACCCTTCCCACAATCAGGGGTCTCCAGTCCGATGGCCCAT +
Preference number: 1 (lower is better)
Translates to: NTERRVPSSEEALYP*QPFPQSGVSSPMAH
Trigger: ATGGGCCATCGGACTGGAGACCCCTGATTGTGGGAAGGGTTGCCAGGGATAAAGAGCTTCCTCACTGGATGGGACCCGCCTTTCTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR CCA 90 bp CACAATGGGAGGCTGAGCCTTTCAAAGGCCCAACCAGAAGAGAGCTaGCGGCTACACAAAACCAGGGTGTGGTTAAGTGCCAGGCGAGGT +
Preference number: 1 (lower is better)
Translates to: HNGRLSLSKAQPEES*RLHKTRVWLSARRG
Trigger: ACCTCGCCTGGCACTTAACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAAGGCTCAGCCTCCCATTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR TCA 90 bp AGAGCACAGGGCAGAACACAACACAGAAAGGCGGGTCCCATCCAGTaGGGAAGCTCTTTATCCCTGGCAACCCTTCCCACAATCAGGGGT +
Preference number: 1 (lower is better)
Translates to: RAQGRTQHRKAGPIQ*GSSLSLATLPTIRG
Trigger: ACCCCTGATTGTGGGAAGGGTTGCCAGGGATAAAGAGCTTCCTCACTGGATGGGACCCGCCTTTCTGTGTTGTGTTCTGCCCTGTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR TCA 90 bp CGCAGCAGGATGGGCTGGTCTGAGGTGATAACATTCCCATTCATGTaGAGGTTGCACTTCATCGGCTGCCCGTCCAGACACCGGTTGTTG +
Preference number: 1 (lower is better)
Translates to: RSRMGWSEVITFPFM*RLHFIGCPSRHRLL
Trigger: CAACAACCGGTGTCTGGACGGGCAGCCGATGAAGTGCAACCTTCACATGAATGGGAATGTTATCACCTCAGACCAGCCCATCCTGCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445215.5
3UTR CCA 90 bp TTTATCCCTGGCAACCCTTCCCACAATCAGGGGTCTCCAGTCCGATaGCCCATTGGTCATAAGCTTTGCCTTGGGGAAACAGAGCCACCC +
Preference number: 1 (lower is better)
Translates to: FIPGNPSHNQGSPVR*PIGHKLCLGETEPP
Trigger: GGGTGGCTCTGTTTCCCCAAGGCAAAGCTTATGACCAATGGGCCATCGGACTGGAGACCCCTGATTGTGGGAAGGGTTGCCAGGGATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR CCA 90 bp CTGGAAAAAGCAGGGTCCTTCAGACAGCCCCCACGCTGCATCCCATaGGGCCACAAGAAAGCCACCCAGAGAATTCAGTGTACCATTTCC +
Preference number: 1 (lower is better)
Translates to: LEKAGSFRQPPRCIP*GHKKATQRIQCTIS
Trigger: GGAAATGGTACACTGAATTCTCTGGGTGGCTTTCTTGTGGCCCCATGGGATGCAGCGTGGGGGCTGTCTGAAGGACCCTGCTTTTTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR TCA 90 bp TCGGCTGCCCGTCCAGACACCGGTTGTTGTACTTCTTATATGCGGTaGTGGCATCGTCCTTTTTCACAAACACCACCTCCGCTACCCCAG +
Preference number: 1 (lower is better)
Translates to: SAARPDTGCCTSYMR*WHRPFSQTPPPLPQ
Trigger: CTGGGGTAGCGGAGGTGGTGTTTGTGAAAAAGGACGATGCCATCACCGCATATAAGAAGTACAACAACCGGTGTCTGGACGGGCAGCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445215.5
3UTR GCA 90 bp TGGTCATGGATGGATGGGGTCACTCACATAAGTGGGAACAAACAGTaGCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGAC +
Preference number: 1 (lower is better)
Translates to: WSWMDGVTHISGNKQ*PLVAAGYMPPGIPD
Trigger: GTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACTGTTTGTTCCCACTTATGTGAGTGACCCCATCCATCCATGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR CCA 90 bp GGTGGGGCATTCAGCACAACTCAAGGAAAAGGGAAAGGTGAACTCTaGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAA +
Preference number: 1 (lower is better)
Translates to: GGAFSTTQGKGKGEL*RTSSGWRRHGTPSQ
Trigger: TTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCTTGAGTTGTGCTGAATGCCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR TCA 90 bp AAGCTTGATTTTGAATTCTGTGGGCTGCGTGGTCACAGAGGCCCCTaGGGACTTGAAGAGTGCCTTCAGGATGGTGTCAGGGTCCACTTC +
Preference number: 1 (lower is better)
Translates to: KLDFEFCGLRGHRGP*GLEECLQDGVRVHF
Trigger: GAAGTGGACCCTGACACCATCCTGAAGGCACTCTTCAAGTCCTCAGGGGCCTCTGTGACCACGCAGCCCACAGAATTCAAAATCAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445215.5
3UTR TCA 90 bp TCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTaGGCCTTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACA +
Preference number: 1 (lower is better)
Translates to: SIQISSKPKHCTMGG*AFQRPNQKRAGGYT
Trigger: TGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR GCA 90 bp CTTCATCGGCTGCCCGTCCAGACACCGGTTGTTGTACTTCTTATATaGGGTGATGGCATCGTCCTTTTTCACAAACACCACCTCCGCTAC +
Preference number: 1 (lower is better)
Translates to: LHRLPVQTPVVVLLI*GDGIVLFHKHHLRY
Trigger: GTAGCGGAGGTGGTGTTTGTGAAAAAGGACGATGCCATCACCGCATATAAGAAGTACAACAACCGGTGTCTGGACGGGCAGCCGATGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445215.5
3UTR TCA 90 bp GGATATATGCCTCCAGGCATCCCTGACCACTGTCCTGTAGACAACTaGGGCCAGAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATT +
Preference number: 1 (lower is better)
Translates to: GYMPPGIPDHCPVDN*GQKWRARNKLTSSI
Trigger: AATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTCTGGCCTCAGTTGTCTACAGGACAGTGGTCAGGGATGCCTGGAGGCATATATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR CCA 90 bp GCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGGCTCTCAGGCCGACCTaGCTCCCGTCAGGACACCAG +
Preference number: 2 (lower is better)
Translates to: ARRGENREGSQHSPLPAKALRPT*LPSGHQ
Trigger: CTGGTGTCCTGACGGGAGCCAGGTCGGCCTGAGAGC...CTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR TCA 90 bp GGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGACACGCGGGTCCCATCCAGTaGGGAAGCTCTTTATCCCTG +
Preference number: 2 (lower is better)
Translates to: GEVRTGRAHNTAPSQQRHAGPIQ*GSSLSL
Trigger: CAGGGATAAAGAGCTTCCTCACTGGATGGGACCCGC...GTGTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR TCA 90 bp CGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCCCAGGCACCTCCACTaGCAAGACAGAGGAGCGGCA +
Preference number: 2 (lower is better)
Translates to: RPNCLRLCWGNTLPGRAAPRHLH*QDRGAA
Trigger: TGCCGCTCCTCTGTCTTGTCAGTGGAGGTGCCTGGG...GGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR GCA 90 bp CCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCTGCAGAGCCACCCTCCTCTaGCCCCACTTCTGGCTGCCT +
Preference number: 2 (lower is better)
Translates to: PTVCAYAGETPCLVELPCRATLL*PHFWLP
Trigger: AGGCAGCCAGAAGTGGGGGCAGAGGAGGGTGGCTCT...GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CCA 90 bp GACAGAGGAGCGGCACAGCTCTCAGGCCGACCTGGCTCCCGTCAGGACACCAGGGGGAAAGGTGAACTCTaGAGAACTTCCTCTGGGTGG +
Preference number: 2 (lower is better)
Translates to: DRGAAQLSGRPGSRQDTRGKGEL*RTSSGW
Trigger: CCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCC...CCTGGTGTCCTGACGGGAGCCAGGTCGGCCTGAGAGCTGTGCCGCTCCTCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CCA 90 bp TTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCACTAGTGAGGCCTGGAGCCACGGGTCTCCAGTCCGATaGCCCATTGGTCATAAGCTT +
Preference number: 2 (lower is better)
Translates to: FPAVQPHPALATSEAWSHGSPVR*PIGHKL
Trigger: AAGCTTATGACCAATGGGCCATCGGACTGGAGACCC...GTGGCTCCAGGCCTCACTAGTGGCAAGGGCAGGATGAGGCTGCACCGCTGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR TCA 90 bp GGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGAAATCAGCTTGGGGCTaGGGCTCGGGGAGGCACACA +
Preference number: 2 (lower is better)
Translates to: GGDDTGLQAKSLDRLFPAKSAWG*GSGRHT
Trigger: TGTGTGCCTCCCCGAGCCTCAGCCCCAAGCTGATTT...CGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR GCA 90 bp AACAAACAGTGCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACAGAGCCACCCTCCTCTaGCCCCACTTCTGGCTGCCT +
Preference number: 2 (lower is better)
Translates to: NKQCPLVAAGYMPPGIPDRATLL*PHFWLP
Trigger: AGGCAGCCAGAAGTGGGGGCAGAGGAGGGTGGCTCT...GTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR GCA 90 bp GGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGACTCTTCCCAGCGGTaGAGCCTCATCCTGCCCTTG +
Preference number: 2 (lower is better)
Translates to: GGDDTGLQAKSLDRLFPADSSQR*SLILPL
Trigger: CAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTC...CGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CCA 90 bp GCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACCACTGTCCTGCCCCTTGGTGGCAGCTaGATATATGCCTCCAGGCAT +
Preference number: 2 (lower is better)
Translates to: APWWQLDICLQASLTTVLPLGGS*IYASRH
Trigger: ATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGG...CAGGACAGTGGTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR CCA 90 bp CGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCTGTCTGCGCCTATGCTaGGGAAACACCTTGCCTGGT +
Preference number: 2 (lower is better)
Translates to: RPNCLRLCWGNTLPGRAACLRLC*GNTLPG
Trigger: ACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACA...GGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR CCA 90 bp GAGGAAGCTCTTTATCCCTGGCAACCCTTCCCACAATCAGGGGTCTCCAGTCCGTCCGCTACCCCAGGATaGACCAGTCGAGCTCGCTTG +
Preference number: 2 (lower is better)
Translates to: EEALYPWQPFPQSGVSSPSATPG*TSRARL
Trigger: CAAGCGAGCTCGACTGGTCCATCCTGGGGTAGCGGA...CGGACTGGAGACCCCTGATTGTGGGAAGGGTTGCCAGGGATAAAGAGCTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445215.5
3UTR CAA 90 bp CTGGCAACCCTTCCCACAATCAGGGGTCTCCAGTCCGATGGCCCATaGGTCATAAGCTTTGCCTTGGGGAAACAGAGCCACCCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: LATLPTIRGLQSDGP*VISFALGKQSHPPL
Trigger: CAGAGGAGGGTGGCTCTGTTTCCCCAAGGCAAAGCTTATGACCAATGGGCCATCGGACTGGAGACCCCTGATTGTGGGAAGGGTTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR GCA 90 bp CACCCAGGCACCTCCACTGACAAGACAGAGGAGCGGCACAGCTCTCAGGCCGACGCTGCCTCACTCCCCTaGTCAAAGCTTGATTTTGAA +
Preference number: 2 (lower is better)
Translates to: HPGTSTDKTEERHSSQADAASLP*SKLDFE
Trigger: TTCAAAATCAAGCTTTGAGCAGGGGAGTGAGGCAGC...GTCGGCCTGAGAGCTGTGCCGCTCCTCTGTCTTGTCAGTGGAGGTGCCTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445215.5
3UTR-3UTR CCA 90 bp GCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACCACTGTCCTGGGGTCTCCAGTCCGATaGCCCATTGGTCATAAGCTT +
Preference number: 2 (lower is better)
Translates to: APWWQLDICLQASLTTVLGSPVR*PIGHKL
Trigger: AAGCTTATGACCAATGGGCCATCGGACTGGAGACCC...CAGGACAGTGGTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CCA 90 bp CACCCAGGCACCTCCACTGACAAGACAGAGGAGCGGCACAGCTCTCAGGCCGACGAAGCTCTTTATCCCTaGCAACCCTTCCCACAATCA +
Preference number: 2 (lower is better)
Translates to: HPGTSTDKTEERHSSQADEALYP*QPFPQS
Trigger: TGATTGTGGGAAGGGTTGCCAGGGATAAAGAGCTTC...GTCGGCCTGAGAGCTGTGCCGCTCCTCTGTCTTGTCAGTGGAGGTGCCTGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CCA 90 bp CGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCGGGAAAGGTGAACTCTaGAGAACTTCCTCTGGGTGG +
Preference number: 2 (lower is better)
Translates to: RPNCLRLCWGNTLPGRAAGKGEL*RTSSGW
Trigger: CCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCC...GGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CCA 90 bp CGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCGCAGCAGGATGGGCTaGTCTGAGGTGATAACATTC +
Preference number: 2 (lower is better)
Translates to: RPNCLRLCWGNTLPGRAARSRMG*SEVITF
Trigger: GAATGTTATCACCTCAGACCAGCCCATCCTGCTGCG...GGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445215.5
3UTR CAA 90 bp ATTTTGAATTCTGTGGGCTGCGTGGTCACAGAGGCCCCTGAGGACTaGAAGAGTGCCTTCAGGATGGTGTCAGGGTCCACTTCGGCAGGG +
Preference number: 2 (lower is better)
Translates to: ILNSVGCVVTEAPED*KSAFRMVSGSTSAG
Trigger: CCCTGCCGAAGTGGACCCTGACACCATCCTGAAGGCACTCTTCAAGTCCTCAGGGGCCTCTGTGACCACGCAGCCCACAGAATTCAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445215.5
3UTR-3UTR TCA 90 bp GGCTCCCGTCAGGACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTAGCGGGTCCCATCCAGTaGGGAAGCTCTTTATCCCTG +
Preference number: 2 (lower is better)
Translates to: GSRQDTRALHPLHCLKSLAGPIQ*GSSLSL
Trigger: CAGGGATAAAGAGCTTCCTCACTGGATGGGACCCGC...TAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTCCTGACGGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR GCA 90 bp CACCCAGGCACCTCCACTGACAAGACAGAGGAGCGGCACAGCTCTCAGGCCGACATTGGTCATAAGCTTTaGCTTGGGGAAACAGAGCCA +
Preference number: 2 (lower is better)
Translates to: HPGTSTDKTEERHSSQADIGHKL*LGETEP
Trigger: TGGCTCTGTTTCCCCAAGGCAAAGCTTATGACCAAT...GTCGGCCTGAGAGCTGTGCCGCTCCTCTGTCTTGTCAGTGGAGGTGCCTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR GCA 90 bp GGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGCAGCTGGATATATaGCTCCAGGCATCCCTGACC +
Preference number: 2 (lower is better)
Translates to: GSEVSSQLSAPMLGKHLAWQLDI*LQASLT
Trigger: GGTCAGGGATGCCTGGAGGCATATATCCAGCTGCCA...GGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR CCA 90 bp TCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTTACCACGCTGCATCCCATaGGGCCACAAGAAAGCCACC +
Preference number: 2 (lower is better)
Translates to: SKAQPEESWRLHKTRVWLPRCIP*GHKKAT
Trigger: GGTGGCTTTCTTGTGGCCCCATGGGATGCAGCGTGG...TAACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CCA 90 bp GGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCGAAGGGAAAGAGAGCTaGGGTGGGGCATTCAGCACA +
Preference number: 2 (lower is better)
Translates to: GSEVSSQLSAPMLGKHLAEGKES*GGAFST
Trigger: TGTGCTGAATGCCCCACCCCAGCTCTCTTTCCCTTC...GGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CCA 90 bp CGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCACAAACAGTGCCCCTTaGTGGCAGCTGGATATATGC +
Preference number: 2 (lower is better)
Translates to: RPNCLRLCWGNTLPGRAATNSAP*WQLDIC
Trigger: GCATATATCCAGCTGCCACCAAGGGGCACTGTTTGT...GGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR TCA 90 bp TCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTTAGCGGGTCCCATCCAGTaGGGAAGCTCTTTATCCCTG +
Preference number: 2 (lower is better)
Translates to: SKAQPEESWRLHKTRVWLAGPIQ*GSSLSL
Trigger: CAGGGATAAAGAGCTTCCTCACTGGATGGGACCCGC...TAACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR GCA 90 bp GGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCAACTGTCTGCGCCTATaGTGGGGAAACACCTTGCCT +
Preference number: 2 (lower is better)
Translates to: GSEVSSQLSAPMLGKHLANCLRL*WGNTLP
Trigger: AGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTT...GGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR GCA 90 bp GGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTCATTCAGGGACTaGCTGGGCTCTGAAGTTTCG +
Preference number: 2 (lower is better)
Translates to: GSEVSSQLSAPMLGKHLAWSFRD*LGSEVS
Trigger: CGAAACTTCAGAGCCCAGGCAGTCCCTGAATGACCA...GGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR CCA 90 bp CAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTAGAACTTCCTCTGGGTaGAGACGACACGGGACTCCA +
Preference number: 2 (lower is better)
Translates to: QAKSLDRLFPAVQPHPALRTSSG*RRHGTP
Trigger: TGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCT...AAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CCA 90 bp GGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGAAAGAGAGCTGGGGTaGGGCATTCAGCACAACTCA +
Preference number: 2 (lower is better)
Translates to: GGDDTGLQAKSLDRLFPAERELG*GIQHNS
Trigger: TGAGTTGTGCTGAATGCCCCACCCCAGCTCTCTTTC...CGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CCA 90 bp GGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCCAACCAGAAGAGAGCTaGCGGCTACACAAAACCAGG +
Preference number: 2 (lower is better)
Translates to: GSEVSSQLSAPMLGKHLAQPEES*RLHKTR
Trigger: CCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTG...GGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR CCA 90 bp GCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACCACTGTCCTGGGTCACTCACATAAGTaGGAACAAACAGTGCCCCTT +
Preference number: 2 (lower is better)
Translates to: APWWQLDICLQASLTTVLGHSHK*EQTVPL
Trigger: AAGGGGCACTGTTTGTTCCCACTTATGTGAGTGACC...CAGGACAGTGGTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR CCA 90 bp GGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAGGTCACTCACATAAGTaGGAACAAACAGTGCCCCTT +
Preference number: 2 (lower is better)
Translates to: GTAWALKFRPNCLRLCWGGHSHK*EQTVPL
Trigger: AAGGGGCACTGTTTGTTCCCACTTATGTGAGTGACC...TCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR CAA 90 bp TGGATGGATGGGGTCACTCACATAAGTGGGAACAAACAGTGCCCCTaGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACCACTGT +
Preference number: 2 (lower is better)
Translates to: WMDGVTHISGNKQCP*VAAGYMPPGIPDHC
Trigger: ACAGTGGTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACTGTTTGTTCCCACTTATGTGAGTGACCCCATCCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR TCA 90 bp CGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCAGCCTACCTTGGCGATaGGATGAAGAAACATACTAC +
Preference number: 2 (lower is better)
Translates to: RPNCLRLCWGNTLPGRAASLPWR*DEETYY
Trigger: GTAGTATGTTTCTTCATCTCATCGCCAAGGTAGGCT...GGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR TCA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTCGGGGAGGCACACACTaGAAAACACAAGCCTACCTT +
Preference number: 2 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLRGGTH*KTQAYL
Trigger: AAGGTAGGCTTGTGTTTTTCAGTGTGTGCCTCCCCG...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR TCA 90 bp CTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCAAATCAGCTTGGGGCTaGGGCTCGGGGAGGCACACA +
Preference number: 2 (lower is better)
Translates to: LTSSIQISSKPKHCTMGGKSAWG*GSGRHT
Trigger: TGTGTGCCTCCCCGAGCCTCAGCCCCAAGCTGATTT...GCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR GCA 90 bp TTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTAGTGGGAACAAACAGTaGCCCTTGGTGGCAGCTGGA +
Preference number: 2 (lower is better)
Translates to: FQRPNQKRAGGYTKPGCGSGNKQ*PLVAAG
Trigger: TCCAGCTGCCACCAAGGGGCACTGTTTGTTCCCACT...ACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CCA 90 bp TCATTCAGGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGGGGTCTCCAGTCCGATaGCCCATTGGTCATAAGCTT +
Preference number: 2 (lower is better)
Translates to: SFRDCLGSEVSSQLSAPMGSPVR*PIGHKL
Trigger: AAGCTTATGACCAATGGGCCATCGGACTGGAGACCC...CATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCCTGAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR TCA 90 bp CCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCTGCACCTTGGCGATGAGATaGAGAAACATACTACAGGAA +
Preference number: 2 (lower is better)
Translates to: PTVCAYAGETPCLVELPCTLAMR*RNILQE
Trigger: TTCCTGTAGTATGTTTCTTCATCTCATCGCCAAGGT...GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR TCA 90 bp TTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTGCTCTCCTTTTTCATTaGTGGGCTGTCACTCAGCCG +
Preference number: 2 (lower is better)
Translates to: FQRPNQKRAGGYTKPGCGALLFH*WAVTQP
Trigger: CGGCTGAGTGACAGCCCATCAATGAAAAAGGAGAGC...ACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445215.5
3UTR-3UTR GCA 90 bp CACAAAACCAGGGTGTGGTTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTCAATTGGTCATAAGCTTTaGCTTGGGGAAACAGAGCCA +
Preference number: 2 (lower is better)
Translates to: HKTRVWLSARRGENREGSIGHKL*LGETEP
Trigger: TGGCTCTGTTTCCCCAAGGCAAAGCTTATGACCAAT...TGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAACCACACCCTGGTTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR GCA 90 bp CAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAAGAGGCCTGAGACCTaGTCCCCACCCAGGCACCTC +
Preference number: 2 (lower is better)
Translates to: QTDLFHSNKLQTQALHNGKRPET*SPPRHL
Trigger: GAGGTGCCTGGGTGGGGAGCAGGTCTCAGGCCTCTT...CCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CCA 90 bp TTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTCAACCAGAAGAGAGCTaGCGGCTACACAAAACCAGG +
Preference number: 2 (lower is better)
Translates to: FQRPNQKRAGGYTKPGCGQPEES*RLHKTR
Trigger: CCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTG...ACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR TCA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTGGACTGCCTGGGCTCTaGAGTTTCGTCCCAACTGTC +
Preference number: 2 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLGLPGL*SFVPTV
Trigger: GACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCC...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR GCA 90 bp GACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTAATACACACAAAGGCCCCCACTTCTGGCTaGCTCACTCCCCTGCTCAAA +
Preference number: 2 (lower is better)
Translates to: DTRALHPLHCLKSLIHTKAPTSG*LTPLLK
Trigger: TTTGAGCAGGGGAGTGAGGCAGCCAGAAGTGGGGGC...CTTTGTGTGTATTAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000445215.5
3UTR-3UTR TCA 90 bp CAAGCCTACCTTGGCGATGAGATGAAGAAACATACTACAGGAAACGTTAACGTACCAGTCGAGCTCGCTTaGGGGCCCCACACACACAGA +
Preference number: 2 (lower is better)
Translates to: QAYLGDEMKKHTTGNVNVPVELA*GPHTHR
Trigger: TCTGTGTGTGTGGGGCCCTCAAGCGAGCTCGACTGG...TACGTTAACGTTTCCTGTAGTATGTTTCTTCATCTCATCGCCAAGGTAGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445215.5
3UTR-3UTR GCA 90 bp GAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCGCTGGGGAAACACCTTaGCTGGTAGAGCTGCCCTGC +
Preference number: 2 (lower is better)
Translates to: EMESQEQTDLFHSNKLQTAGETP*LVELPC
Trigger: GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGC...GGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR CCA 90 bp TCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTTAGAAGCTCTTTATCCCTaGCAACCCTTCCCACAATCA +
Preference number: 2 (lower is better)
Translates to: SKAQPEESWRLHKTRVWLEALYP*QPFPQS
Trigger: TGATTGTGGGAAGGGTTGCCAGGGATAAAGAGCTTC...TAACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CCA 90 bp GAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCCACGCTGCATCCCATaGGGCCACAAGAAAGCCACC +
Preference number: 2 (lower is better)
Translates to: EMESQEQTDLFHSNKLQTPRCIP*GHKKAT
Trigger: GGTGGCTTTCTTGTGGCCCCATGGGATGCAGCGTGG...GGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CCA 90 bp GCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCGAAGGGAAAGAGAGCTaGGGTGGGGCATTCAGCACA +
Preference number: 2 (lower is better)
Translates to: ARNKLTSSIQISSKPKHCEGKES*GGAFST
Trigger: TGTGCTGAATGCCCCACCCCAGCTCTCTTTCCCTTC...GCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CCA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTTGTCTGCGCCTATGCTaGGGAAACACCTTGCCTGGT +
Preference number: 2 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLCLRLC*GNTLPG
Trigger: ACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACA...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR CCA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTAACAGTGCCCCTTGGTaGCAGCTGGATATATGCCTC +
Preference number: 2 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLNSAPW*QLDICL
Trigger: GAGGCATATATCCAGCTGCCACCAAGGGGCACTGTT...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR CCA 90 bp CTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCACAAACAGTGCCCCTTaGTGGCAGCTGGATATATGC +
Preference number: 2 (lower is better)
Translates to: LTSSIQISSKPKHCTMGGTNSAP*WQLDIC
Trigger: GCATATATCCAGCTGCCACCAAGGGGCACTGTTTGT...GCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR CCA 90 bp CTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCCTGGTCATGGATGGATaGGGTCACTCACATAAGTGG +
Preference number: 2 (lower is better)
Translates to: LTSSIQISSKPKHCTMGGLVMDG*GHSHKW
Trigger: CCACTTATGTGAGTGACCCCATCCATCCATGACCAG...GCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR TCA 90 bp TTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTACTTCTTATATGCGGTaGTGGCATCGTCCTTTTTCA +
Preference number: 2 (lower is better)
Translates to: FQRPNQKRAGGYTKPGCGTSYMR*WHRPFS
Trigger: TGAAAAAGGACGATGCCATCACCGCATATAAGAAGT...ACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445215.5
3UTR-3UTR GCA 90 bp GAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCAGTGGGAACAAACAGTaGCCCTTGGTGGCAGCTGGA +
Preference number: 2 (lower is better)
Translates to: EMESQEQTDLFHSNKLQTSGNKQ*PLVAAG
Trigger: TCCAGCTGCCACCAAGGGGCACTGTTTGTTCCCACT...GGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR GCA 90 bp GAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCTTGAATTCTGTGGGCTaGGTGGTCACAGAGGCCCCT +
Preference number: 2 (lower is better)
Translates to: EMESQEQTDLFHSNKLQTLNSVG*VVTEAP
Trigger: AGGGGCCTCTGTGACCACGCAGCCCACAGAATTCAA...GGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445215.5
3UTR-3UTR TCA 90 bp GAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCGGGGAGGCACACACTaGAAAACACAAGCCTACCTT +
Preference number: 2 (lower is better)
Translates to: EMESQEQTDLFHSNKLQTRGGTH*KTQAYL
Trigger: AAGGTAGGCTTGTGTTTTTCAGTGTGTGCCTCCCCG...GGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR GCA 90 bp GAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCTGGTCATTCAGGGACTaGCTGGGCTCTGAAGTTTCG +
Preference number: 2 (lower is better)
Translates to: EMESQEQTDLFHSNKLQTWSFRD*LGSEVS
Trigger: CGAAACTTCAGAGCCCAGGCAGTCCCTGAATGACCA...GGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR CCA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGAAAGAGAGCTGGGGTaGGGCATTCAGCACAACTCA +
Preference number: 2 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQERELG*GIQHNS
Trigger: TGAGTTGTGCTGAATGCCCCACCCCAGCTCTCTTTC...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CCA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAACAAACAGTGCCCCTTaGTGGCAGCTGGATATATGC +
Preference number: 2 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQTNSAP*WQLDIC
Trigger: GCATATATCCAGCTGCCACCAAGGGGCACTGTTTGT...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR CCA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAACTGGTCATGGATGGATaGGGTCACTCACATAAGTGG +
Preference number: 2 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQLVMDG*GHSHKW
Trigger: CCACTTATGTGAGTGACCCCATCCATCCATGACCAG...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR CCA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTAGGAAAATAATCCTCTaGTCATGGATGGATGGGGTC +
Preference number: 2 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLRKIIL*SWMDGV
Trigger: GACCCCATCCATCCATGACCAGAGGATTATTTTCCT...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR TCA 90 bp GAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCACATTCCCATTCATGTaGAGGTTGCACTTCATCGGC +
Preference number: 2 (lower is better)
Translates to: EMESQEQTDLFHSNKLQTTFPFM*RLHFIG
Trigger: GCCGATGAAGTGCAACCTTCACATGAATGGGAATGT...GGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445215.5
3UTR-3UTR CCA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAATAATCCTCTGGTCATaGATGGATGGGGTCACTCAC +
Preference number: 2 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQIILWS*MDGVTH
Trigger: GTGAGTGACCCCATCCATCCATGACCAGAGGATTAT...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR CCA 90 bp GAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCATAATCCTCTGGTCATaGATGGATGGGGTCACTCAC +
Preference number: 2 (lower is better)
Translates to: EMESQEQTDLFHSNKLQTIILWS*MDGVTH
Trigger: GTGAGTGACCCCATCCATCCATGACCAGAGGATTAT...GGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR TCA 90 bp GACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTAATACACACAAAGACCTTGGCGATGAGATaGAGAAACATACTACAGGAA +
Preference number: 2 (lower is better)
Translates to: DTRALHPLHCLKSLIHTKTLAMR*RNILQE
Trigger: TTCCTGTAGTATGTTTCTTCATCTCATCGCCAAGGT...CTTTGTGTGTATTAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR CCA 72 bp ACAAGACAGAGGAGCGGCACAGCTCTCAGGCCGACCTaGCTCCCGTCAGGACACCAGGGCTCTCCATCCCCT +
Preference number: 3 (lower is better)
Translates to: TRQRSGTALRPT*LPSGHQGSPSP
Trigger: AGGGGATGGAGAGCCCTGGTGTCCTGACGGGAGCCAGGTCGGCCTGAGAGCTGTGCCGCTCCTCTGTCTTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CAA 90 bp GCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACCACTGTCCTGTGCTGGGGAAACACCTaGCCTGGTAGAGCTGCCCTG +
Preference number: 3 (lower is better)
Translates to: APWWQLDICLQASLTTVLCWGNT*PGRAAL
Trigger: CAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCA...CAGGACAGTGGTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR TCA 72 bp ACACAAAACCAGGGTGTGGTTAAGTGCCAGGCGAGGTaGGAACCGGGAGGGCTCACAACACAGCCCCCTCCC +
Preference number: 3 (lower is better)
Translates to: TQNQGVVKCQAR*EPGGLTTQPPP
Trigger: GGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAACCACACCCTGGTTTTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR GCA 72 bp GGGTCTCCAGTCCGATGGCCCATTGGTCATAAGCTTTaGCTTGGGGAAACAGAGCCACCCTCCTCTGCCCCC +
Preference number: 3 (lower is better)
Translates to: GSPVRWPIGHKL*LGETEPPSSAP
Trigger: GGGGGCAGAGGAGGGTGGCTCTGTTTCCCCAAGGCAAAGCTTATGACCAATGGGCCATCGGACTGGAGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR CCA 72 bp CCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTaGTTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGC +
Preference number: 3 (lower is better)
Translates to: PEESWRLHKTRV*LSARRGENREG
Trigger: GCCCTCCCGGTTCTCACCTCGCCTGGCACTTAACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR CCA 72 bp AGGCGGGTCCCATCCAGTGAGGAAGCTCTTTATCCCTaGCAACCCTTCCCACAATCAGGGGTCTCCAGTCCG +
Preference number: 3 (lower is better)
Translates to: RRVPSSEEALYP*QPFPQSGVSSP
Trigger: CGGACTGGAGACCCCTGATTGTGGGAAGGGTTGCCAGGGATAAAGAGCTTCCTCACTGGATGGGACCCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR GCA 72 bp TGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATaGTGGGGAAACACCTTGCCTGGTAGAGCTGCCCTG +
Preference number: 3 (lower is better)
Translates to: WALKFRPNCLRL*WGNTLPGRAAL
Trigger: CAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR CCA 72 bp GCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTaGGGAAACACCTTGCCTGGTAGAGCTGCCCTGCTC +
Preference number: 3 (lower is better)
Translates to: ALKFRPNCLRLC*GNTLPGRAALL
Trigger: GAGCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR CAA 90 bp CACAAAACCAGGGTGTGGTTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTCAGTCATAAGCTTTGCCTaGGGGAAACAGAGCCACCCT +
Preference number: 3 (lower is better)
Translates to: HKTRVWLSARRGENREGSVISFA*GKQSHP
Trigger: AGGGTGGCTCTGTTTCCCCAAGGCAAAGCTTATGAC...TGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAACCACACCCTGGTTTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CAA 90 bp GGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTCATAAGCTTTGCCTaGGGGAAACAGAGCCACCCT +
Preference number: 3 (lower is better)
Translates to: GGDDTGLQAKSLDRLFPAVISFA*GKQSHP
Trigger: AGGGTGGCTCTGTTTCCCCAAGGCAAAGCTTATGAC...CGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR TCA 72 bp GGCAGAACACAACACAGAAAGGCGGGTCCCATCCAGTaGGGAAGCTCTTTATCCCTGGCAACCCTTCCCACA +
Preference number: 3 (lower is better)
Translates to: GRTQHRKAGPIQ*GSSLSLATLPT
Trigger: TGTGGGAAGGGTTGCCAGGGATAAAGAGCTTCCTCACTGGATGGGACCCGCCTTTCTGTGTTGTGTTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR TCA 72 bp CCTCCAGGCATCCCTGACCACTGTCCTGTAGACAACTaGGGCCAGAAATGGAGAGCCAGGAACAAACTGACC +
Preference number: 3 (lower is better)
Translates to: PPGIPDHCPVDN*GQKWRARNKLT
Trigger: GGTCAGTTTGTTCCTGGCTCTCCATTTCTGGCCTCAGTTGTCTACAGGACAGTGGTCAGGGATGCCTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR TCA 72 bp TTTGAATTCTGTGGGCTGCGTGGTCACAGAGGCCCCTaGGGACTTGAAGAGTGCCTTCAGGATGGTGTCAGG +
Preference number: 3 (lower is better)
Translates to: FEFCGLRGHRGP*GLEECLQDGVR
Trigger: CCTGACACCATCCTGAAGGCACTCTTCAAGTCCTCAGGGGCCTCTGTGACCACGCAGCCCACAGAATTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445215.5
3UTR-3UTR CAA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGTCATAAGCTTTGCCTaGGGGAAACAGAGCCACCCT +
Preference number: 3 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLVISFA*GKQSHP
Trigger: AGGGTGGCTCTGTTTCCCCAAGGCAAAGCTTATGAC...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR TCA 72 bp ATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTaGGCCTTTCAAAGGCCCAACCAGAAGAGAGCTGGC +
Preference number: 3 (lower is better)
Translates to: ISSKPKHCTMGG*AFQRPNQKRAG
Trigger: GCCAGCTCTCTTCTGGTTGGGCCTTTGAAAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR TCA 72 bp CTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTaGCCACTGTCCTGTAGACAACTGAGGCCAGAAATG +
Preference number: 3 (lower is better)
Translates to: LGGSWIYASRHP*PLSCRQLRPEM
Trigger: CATTTCTGGCCTCAGTTGTCTACAGGACAGTGGTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR GCA 72 bp ATGGATGGGGTCACTCACATAAGTGGGAACAAACAGTaGCCCTTGGTGGCAGCTGGATATATGCCTCCAGGC +
Preference number: 3 (lower is better)
Translates to: MDGVTHISGNKQ*PLVAAGYMPPG
Trigger: GCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACTGTTTGTTCCCACTTATGTGAGTGACCCCATCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR CAA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTTGCTGGGGAAACACCTaGCCTGGTAGAGCTGCCCTG +
Preference number: 3 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLCWGNT*PGRAAL
Trigger: CAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCA...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR CAA 90 bp ATTGATGGGCTGTCACTCAGCCGCAGCAGGATGGGCTGGTCTGAGGTGATAACACCGTCCAGACACCGGTaGTTGTACTTCTTATATGCG +
Preference number: 3 (lower is better)
Translates to: IDGLSLSRSRMGWSEVITPSRHR*LYFLYA
Trigger: CGCATATAAGAAGTACAACAACCGGTGTCTGGACGG...TGTTATCACCTCAGACCAGCCCATCCTGCTGCGGCTGAGTGACAGCCCATCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445215.5
3UTR TCA 72 bp ATGGGCTGGTCTGAGGTGATAACATTCCCATTCATGTaGAGGTTGCACTTCATCGGCTGCCCGTCCAGACAC +
Preference number: 3 (lower is better)
Translates to: MGWSEVITFPFM*RLHFIGCPSRH
Trigger: GTGTCTGGACGGGCAGCCGATGAAGTGCAACCTTCACATGAATGGGAATGTTATCACCTCAGACCAGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445215.5
3UTR-3UTR CAA 90 bp CAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGCCTCATCCTGCCCTaGCCACTAGTGAGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: QTDLFHSNKLQTQALHNGSLILP*PLVRPG
Trigger: TCCAGGCCTCACTAGTGGCAAGGGCAGGATGAGGCT...CCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CAA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAACCAGTCGAGCTCGCTaGAGGGCCCCACACACACAG +
Preference number: 3 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQTSRAR*RAPHTQ
Trigger: CTGTGTGTGTGGGGCCCTCAAGCGAGCTCGACTGGT...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445215.5
3UTR-3UTR CAA 90 bp GAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCAGCCTCATCCTGCCCTaGCCACTAGTGAGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: EMESQEQTDLFHSNKLQTSLILP*PLVRPG
Trigger: TCCAGGCCTCACTAGTGGCAAGGGCAGGATGAGGCT...GGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CAA 90 bp GGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGTCTCCATCCCCTCCATaGTTTGAAAAGCTTAATACA +
Preference number: 3 (lower is better)
Translates to: GGDDTGLQAKSLDRLFPASPSPP*FEKLNT
Trigger: TGTATTAAGCTTTTCAAACAATGGAGGGGATGGAGA...CGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CAA 90 bp CTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCAACAAACAGTGCCCCTaGGTGGCAGCTGGATATATG +
Preference number: 3 (lower is better)
Translates to: LTSSIQISSKPKHCTMGGNKQCP*VAAGYM
Trigger: CATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT...GCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR TCA 72 bp CGTCCAGACACCGGTTGTTGTACTTCTTATATGCGGTaGTGGCATCGTCCTTTTTCACAAACACCACCTCCG +
Preference number: 3 (lower is better)
Translates to: RPDTGCCTSYMR*WHRPFSQTPPP
Trigger: CGGAGGTGGTGTTTGTGAAAAAGGACGATGCCATCACCGCATATAAGAAGTACAACAACCGGTGTCTGGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445215.5
3UTR GCA 72 bp CTGCCCGTCCAGACACCGGTTGTTGTACTTCTTATATaGGGTGATGGCATCGTCCTTTTTCACAAACACCAC +
Preference number: 3 (lower is better)
Translates to: LPVQTPVVVLLI*GDGIVLFHKHH
Trigger: GTGGTGTTTGTGAAAAAGGACGATGCCATCACCGCATATAAGAAGTACAACAACCGGTGTCTGGACGGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445215.5
3UTR CCA 72 bp CCAAGGCAGGAAAATAATCCTCTGGTCATGGATGGATaGGGTCACTCACATAAGTGGGAACAAACAGTGCCC +
Preference number: 3 (lower is better)
Translates to: PRQENNPLVMDG*GHSHKWEQTVP
Trigger: GGGCACTGTTTGTTCCCACTTATGTGAGTGACCCCATCCATCCATGACCAGAGGATTATTTTCCTGCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR CAA 90 bp GACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTAATACACACAAAGCAGTCCGATGGCCCATaGGTCATAAGCTTTGCCTTG +
Preference number: 3 (lower is better)
Translates to: DTRALHPLHCLKSLIHTKQSDGP*VISFAL
Trigger: CAAGGCAAAGCTTATGACCAATGGGCCATCGGACTG...CTTTGTGTGTATTAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR-3UTR CAA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAAACAAACAGTGCCCCTaGGTGGCAGCTGGATATATG +
Preference number: 3 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQNKQCP*VAAGYM
Trigger: CATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR-3UTR CAA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTCATCCCCTCCATTGTTaGAAAAGCTTAATACACACA +
Preference number: 3 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLHPLHC*KSLIHT
Trigger: TGTGTGTATTAAGCTTTTCAAACAATGGAGGGGATG...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GACAGAGGAGCGGCACAGCTCTCAGGCCGACCTGGCTCCCGTCAGGACACCAGGCCAGTCGAGCTCGCTTaGGGGCCCCACACACACAGA +
Preference number: 4 (lower is better)
Translates to: DRGAAQLSGRPGSRQDTRPVELA*GPHTHR
Trigger: TCTGTGTGTGTGGGGCCCTCAAGCGAGCTCGACTGG...CCTGGTGTCCTGACGGGAGCCAGGTCGGCCTGAGAGCTGTGCCGCTCCTCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCACTAGTGAGGCCTGGAGCCACACCTGGCGGGGCTTCTaGGGCACCGTGGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FPAVQPHPALATSEAWSHTWRGF*GTVVCC
Trigger: GCAGCAGACCACGGTGCCCCAGAAGCCCCGCCAGGT...GTGGCTCCAGGCCTCACTAGTGGCAAGGGCAGGATGAGGCTGCACCGCTGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGAAGAGGCCTGAGACCTaGTCCCCACCCAGGCACCTC +
Preference number: 4 (lower is better)
Translates to: ARRGENREGSQHSPLPAKKRPET*SPPRHL
Trigger: GAGGTGCCTGGGTGGGGAGCAGGTCTCAGGCCTCTT...CTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GACAGAGGAGCGGCACAGCTCTCAGGCCGACCTGGCTCCCGTCAGGACACCAGGGACTCTTCCCAGCGGTaGAGCCTCATCCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: DRGAAQLSGRPGSRQDTRDSSQR*SLILPL
Trigger: CAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTC...CCTGGTGTCCTGACGGGAGCCAGGTCGGCCTGAGAGCTGTGCCGCTCCTCTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCACGGGCATCAGCAACCTaGCGGGGCTTCTGGGGCACC +
Preference number: 4 (lower is better)
Translates to: LSARRGENREGSQHSPLPRASAT*RGFWGT
Trigger: GGTGCCCCAGAAGCCCCGCCAGGTTGCTGATGCCCG...TGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GACAGAGGAGCGGCACAGCTCTCAGGCCGACCTGGCTCCCGTCAGGACACCAGGTCCGCTACCCCAGGATaGACCAGTCGAGCTCGCTTG +
Preference number: 4 (lower is better)
Translates to: DRGAAQLSGRPGSRQDTRSATPG*TSRARL
Trigger: CAAGCGAGCTCGACTGGTCCATCCTGGGGTAGCGGA...CCTGGTGTCCTGACGGGAGCCAGGTCGGCCTGAGAGCTGTGCCGCTCCTCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGAAATCAGCTTGGGGCTaGGGCTCGGGGAGGCACACA +
Preference number: 4 (lower is better)
Translates to: ARRGENREGSQHSPLPAKKSAWG*GSGRHT
Trigger: TGTGTGCCTCCCCGAGCCTCAGCCCCAAGCTGATTT...CTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGGCCCCCACTTCTGGCTaGCTCACTCCCCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: ARRGENREGSQHSPLPAKAPTSG*LTPLLK
Trigger: TTTGAGCAGGGGAGTGAGGCAGCCAGAAGTGGGGGC...CTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAACCTGGCGGGGCTTCTaGGGCACCGTGGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GTAWALKFRPNCLRLCWGTWRGF*GTVVCC
Trigger: GCAGCAGACCACGGTGCCCCAGAAGCCCCGCCAGGT...TCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp CCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCTGCACCTGGCGGGGCTTCTaGGGCACCGTGGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PTVCAYAGETPCLVELPCTWRGF*GTVVCC
Trigger: GCAGCAGACCACGGTGCCCCAGAAGCCCCGCCAGGT...GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp CGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCGGGCATCAGCAACCTaGCGGGGCTTCTGGGGCACC +
Preference number: 4 (lower is better)
Translates to: RPNCLRLCWGNTLPGRAARASAT*RGFWGT
Trigger: GGTGCCCCAGAAGCCCCGCCAGGTTGCTGATGCCCG...GGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp GCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGTTTGAGCCGGGCATCTaGGAGGCCAATCTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: ARRGENREGSQHSPLPAKFEPGI*EANLLP
Trigger: CGGCAGAAGATTGGCCTCTCAGATGCCCGGCTCAAA...CTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CACCCAGGCACCTCCACTGACAAGACAGAGGAGCGGCACAGCTCTCAGGCCGACCCGGCAGGATGGGGATaGAGTGGTGCCATGGCTTTC +
Preference number: 4 (lower is better)
Translates to: HPGTSTDKTEERHSSQADPAGWG*SGAMAF
Trigger: GAAAGCCATGGCACCACTTCATCCCCATCCTGCCGG...GTCGGCCTGAGAGCTGTGCCGCTCCTCTGTCTTGTCAGTGGAGGTGCCTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp TTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCACTAGTGAGGCCTGGAGCCACGCCCCCACTTCTGGCTaGCTCACTCCCCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: FPAVQPHPALATSEAWSHAPTSG*LTPLLK
Trigger: TTTGAGCAGGGGAGTGAGGCAGCCAGAAGTGGGGGC...GTGGCTCCAGGCCTCACTAGTGGCAAGGGCAGGATGAGGCTGCACCGCTGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGACACGACTCTTCCCAGCGGTaGAGCCTCATCCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GEVRTGRAHNTAPSQQRHDSSQR*SLILPL
Trigger: CAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTC...GTGTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp CACCCAGGCACCTCCACTGACAAGACAGAGGAGCGGCACAGCTCTCAGGCCGACGCTGGGGAAACACCTTaGCTGGTAGAGCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: HPGTSTDKTEERHSSQADAGETP*LVELPC
Trigger: GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGC...GTCGGCCTGAGAGCTGTGCCGCTCCTCTGTCTTGTCAGTGGAGGTGCCTGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCACTAGTGAGGCCTGGAGCCACATTCTGTGGGCTGCGTaGTCACAGAGGCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: FPAVQPHPALATSEAWSHILWAA*SQRPLR
Trigger: CCTCAGGGGCCTCTGTGACCACGCAGCCCACAGAAT...GTGGCTCCAGGCCTCACTAGTGGCAAGGGCAGGATGAGGCTGCACCGCTGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGCAATGGGTGGGTTTATaGAGGCAGCAGGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: ARRGENREGSQHSPLPAKQWVGL*RQQGNS
Trigger: GGAGTTCCCCTGCTGCCTTCATAAACCCACCCATTG...CTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGACACCCAGAAGGGACCGGCAGGATGGGGATaGAGTGGTGCCATGGCTTTC +
Preference number: 4 (lower is better)
Translates to: EPGGLTTQPPPSKDTQKGPAGWG*SGAMAF
Trigger: GAAAGCCATGGCACCACTTCATCCCCATCCTGCCGG...TCCCTTCTGGGTGTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGACCAGTCGAGCTCGCTTaGGGGCCCCACACACACAGA +
Preference number: 4 (lower is better)
Translates to: GTAWALKFRPNCLRLCWGPVELA*GPHTHR
Trigger: TCTGTGTGTGTGGGGCCCTCAAGCGAGCTCGACTGG...TCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCAAGTGCCAGGCGAGGTaGGAACCGGGAGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: RPNCLRLCWGNTLPGRAAKCQAR*EPGGLT
Trigger: TGTGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTT...GGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GACAGAGGAGCGGCACAGCTCTCAGGCCGACCTGGCTCCCGTCAGGACACCAGGATGGGGATGAAGTGGTaGCATGGCTTTCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: DRGAAQLSGRPGSRQDTRMGMKW*HGFLLW
Trigger: CCACAGCAGAAAGCCATGGCACCACTTCATCCCCAT...CCTGGTGTCCTGACGGGAGCCAGGTCGGCCTGAGAGCTGTGCCGCTCCTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCTTCTGGGGCACCGTaGTCTGCTGCTTGCGAGAGT +
Preference number: 4 (lower is better)
Translates to: LSARRGENREGSQHSPLPASGAP*SAACES
Trigger: ACTCTCGCAAGCAGCAGACCACGGTGCCCCAGAAGC...TGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGACCTGGCGGGGCTTCTaGGGCACCGTGGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VNSGELPLGGDDTGLQAKTWRGF*GTVVCC
Trigger: GCAGCAGACCACGGTGCCCCAGAAGCCCCGCCAGGT...CTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGCGGGCATCAGCAACCTaGCGGGGCTTCTGGGGCACC +
Preference number: 4 (lower is better)
Translates to: GGDDTGLQAKSLDRLFPARASAT*RGFWGT
Trigger: GGTGCCCCAGAAGCCCCGCCAGGTTGCTGATGCCCG...CGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGTGTCTGCGCCTATGCTaGGGAAACACCTTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ARRGENREGSQHSPLPAKCLRLC*GNTLPG
Trigger: ACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACA...CTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCTGCGGTGGCTGTGCGTGTTaGCTGGCTGAGAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PTVCAYAGETPCLVELPCGGCAC*LAEKAL
Trigger: CAAGGCCTTCTCAGCCAGTCAACACGCACAGCCACC...GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp CACCCAGGCACCTCCACTGACAAGACAGAGGAGCGGCACAGCTCTCAGGCCGACTCTGAACCACTTTGGTaGGAGGGAGGGCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: HPGTSTDKTEERHSSQADSEPLW*EGGPWT
Trigger: TGTCCAAGGCCCTCCCTCTCACCAAAGTGGTTCAGA...GTCGGCCTGAGAGCTGTGCCGCTCCTCTGTCTTGTCAGTGGAGGTGCCTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACCACTGTCCTGAAATCAGCTTGGGGCTaGGGCTCGGGGAGGCACACA +
Preference number: 4 (lower is better)
Translates to: APWWQLDICLQASLTTVLKSAWG*GSGRHT
Trigger: TGTGTGCCTCCCCGAGCCTCAGCCCCAAGCTGATTT...CAGGACAGTGGTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CACAAAACCAGGGTGTGGTTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTCACCCAGGCACCTCCACTaGCAAGACAGAGGAGCGGCA +
Preference number: 4 (lower is better)
Translates to: HKTRVWLSARRGENREGSPRHLH*QDRGAA
Trigger: TGCCGCTCCTCTGTCTTGTCAGTGGAGGTGCCTGGG...TGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAACCACACCCTGGTTTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp TTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCACTAGTGAGGCCTGGAGCCACTGCACAATGGGAGGCTaGGCCTTTCAAAGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: FPAVQPHPALATSEAWSHCTMGG*AFQRPN
Trigger: GTTGGGCCTTTGAAAGGCTCAGCCTCCCATTGTGCA...GTGGCTCCAGGCCTCACTAGTGGCAAGGGCAGGATGAGGCTGCACCGCTGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGACACCCAGAAGGGAGGACTGCCTGGGCTCTaGAGTTTCGTCCCAACTGTC +
Preference number: 4 (lower is better)
Translates to: EPGGLTTQPPPSKDTQKGGLPGL*SFVPTV
Trigger: GACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCC...TCCCTTCTGGGTGTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp TTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCACTAGTGAGGCCTGGAGCCACGGCACCGTGGTCTGCTaGTTGCGAGAGTTCAACATC +
Preference number: 4 (lower is better)
Translates to: FPAVQPHPALATSEAWSHGTVVC*LREFNI
Trigger: GATGTTGAACTCTCGCAAGCAGCAGACCACGGTGCC...GTGGCTCCAGGCCTCACTAGTGGCAAGGGCAGGATGAGGCTGCACCGCTGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGACACCCAGAAGGGATGGGGCACCGTGGTCTaGTGCTTGCGAGAGTTCAAC +
Preference number: 4 (lower is better)
Translates to: EPGGLTTQPPPSKDTQKGWGTVV*CLREFN
Trigger: GTTGAACTCTCGCAAGCAGCAGACCACGGTGCCCCA...TCCCTTCTGGGTGTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCAAGAGGCCTGAGACCTaGTCCCCACCCAGGCACCTC +
Preference number: 4 (lower is better)
Translates to: AKSLDRLFPAVQPHPALAKRPET*SPPRHL
Trigger: GAGGTGCCTGGGTGGGGAGCAGGTCTCAGGCCTCTT...GGCAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAGACTCTTCCCAGCGGTaGAGCCTCATCCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GTAWALKFRPNCLRLCWGDSSQR*SLILPL
Trigger: CAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTC...TCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGACACAGTGGGAACAAACAGTaGCCCTTGGTGGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GEVRTGRAHNTAPSQQRHSGNKQ*PLVAAG
Trigger: TCCAGCTGCCACCAAGGGGCACTGTTTGTTCCCACT...GTGTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp CCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCTGCCTGGTAGAGCTGCCCTaGTCCCTTGACTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PTVCAYAGETPCLVELPCLVELP*SLDSSS
Trigger: GGAGGAGGAGTCAAGGGAGCAGGGCAGCTCTACCAG...GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp GACAGAGGAGCGGCACAGCTCTCAGGCCGACCTGGCTCCCGTCAGGACACCAGGCAACCAGAAGATACCTaGTTTGGGATGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: DRGAAQLSGRPGSRQDTRQPEDT*FGMRGR
Trigger: CCTCCCTCTCATCCCAAAGCAGGTATCTTCTGGTTG...CCTGGTGTCCTGACGGGAGCCAGGTCGGCCTGAGAGCTGTGCCGCTCCTCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CACCCAGGCACCTCCACTGACAAGACAGAGGAGCGGCACAGCTCTCAGGCCGACCTGAGAAGGCCTTGCTaGATCCCAACTCGAGATCGG +
Preference number: 4 (lower is better)
Translates to: HPGTSTDKTEERHSSQADLRRPC*IPTRDR
Trigger: CCGATCTCGAGTTGGGATCCAGCAAGGCCTTCTCAG...GTCGGCCTGAGAGCTGTGCCGCTCCTCTGTCTTGTCAGTGGAGGTGCCTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCTGCGCTTCTGGGGCACCGTaGTCTGCTGCTTGCGAGAGT +
Preference number: 4 (lower is better)
Translates to: PTVCAYAGETPCLVELPCASGAP*SAACES
Trigger: ACTCTCGCAAGCAGCAGACCACGGTGCCCCAGAAGC...GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp AAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCGGGCATCAGCAACCTaGCGGGGCTTCTGGGGCACC +
Preference number: 4 (lower is better)
Translates to: KGELWRTSSGWRRHGTPSRASAT*RGFWGT
Trigger: GGTGCCCCAGAAGCCCCGCCAGGTTGCTGATGCCCG...GCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGAGGATGGGGATGAAGTaGTGCCATGGCTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: ARRGENREGSQHSPLPAKRMGMK*CHGFLL
Trigger: CAGCAGAAAGCCATGGCACCACTTCATCCCCATCCT...CTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CCCAGGATGGACCAGTCGAGCTCGCTTGAGGGCCCCACACACACAGAAAAGCTCAGCCCAGCCATGTGGTaGAGAAAGCCGCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PRMDQSSSLEGPTHTEKLSPAMW*RKPPEA
Trigger: AGCCTCAGGCGGCTTTCTCCACCACATGGCTGGGCT...GAGCTTTTCTGTGTGTGTGGGGCCCTCAAGCGAGCTCGACTGGTCCATCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR CCA 90 bp GCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGCGCAGCAGGATGGGCTaGTCTGAGGTGATAACATTC +
Preference number: 4 (lower is better)
Translates to: ARRGENREGSQHSPLPAKRSRMG*SEVITF
Trigger: GAATGTTATCACCTCAGACCAGCCCATCCTGCTGCG...CTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCTGCATTCTGTGGGCTGCGTaGTCACAGAGGCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: PTVCAYAGETPCLVELPCILWAA*SQRPLR
Trigger: CCTCAGGGGCCTCTGTGACCACGCAGCCCACAGAAT...GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCCTCTGCCCCCACTTCTaGCTGCCTCACTCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: AKSLDRLFPAVQPHPALALCPHF*LPHSPA
Trigger: AGCAGGGGAGTGAGGCAGCCAGAAGTGGGGGCAGAG...GGCAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCTGCCCACGCTGCATCCCATaGGGCCACAAGAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: PTVCAYAGETPCLVELPCPRCIP*GHKKAT
Trigger: GGTGGCTTTCTTGTGGCCCCATGGGATGCAGCGTGG...GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGGCTCTCAGGCCGACCTaGCTCCCGTCAGGACACCAG +
Preference number: 4 (lower is better)
Translates to: ELWRTSSGWRRHGTPSQEALRPT*LPSGHQ
Trigger: CTGGTGTCCTGACGGGAGCCAGGTCGGCCTGAGAGC...CTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGCAACCAGAAGAGAGCTaGCGGCTACACAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: ARRGENREGSQHSPLPAKQPEES*RLHKTR
Trigger: CCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTG...CTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GACAGAGGAGCGGCACAGCTCTCAGGCCGACCTGGCTCCCGTCAGGACACCAGGACAAACAGTGCCCCTTaGTGGCAGCTGGATATATGC +
Preference number: 4 (lower is better)
Translates to: DRGAAQLSGRPGSRQDTRTNSAP*WQLDIC
Trigger: GCATATATCCAGCTGCCACCAAGGGGCACTGTTTGT...CCTGGTGTCCTGACGGGAGCCAGGTCGGCCTGAGAGCTGTGCCGCTCCTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCACTAGTGAGGCCTGGAGCCACCATTCAGGGACTGCCTaGGCTCTGAAGTTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: FPAVQPHPALATSEAWSHHSGTA*ALKFRP
Trigger: GGGACGAAACTTCAGAGCCCAGGCAGTCCCTGAATG...GTGGCTCCAGGCCTCACTAGTGGCAAGGGCAGGATGAGGCTGCACCGCTGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCGGTGGCTGTGCGTGTTaGCTGGCTGAGAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: AKSLDRLFPAVQPHPALAGGCAC*LAEKAL
Trigger: CAAGGCCTTCTCAGCCAGTCAACACGCACAGCCACC...GGCAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCCAGTCGAGCTCGCTTaGGGGCCCCACACACACAGA +
Preference number: 4 (lower is better)
Translates to: ELWRTSSGWRRHGTPSQEPVELA*GPHTHR
Trigger: TCTGTGTGTGTGGGGCCCTCAAGCGAGCTCGACTGG...CTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACCACTGTCCTGGGTCACAGAGGCCCCTaGGGACTTGAAGAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: APWWQLDICLQASLTTVLGHRGP*GLEECL
Trigger: AAGGCACTCTTCAAGTCCTCAGGGGCCTCTGTGACC...CAGGACAGTGGTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCAAGTGCCAGGCGAGGTaGGAACCGGGAGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: LQAKSLDRLFPAVQPHPAKCQAR*EPGGLT
Trigger: TGTGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTT...GGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAAAGTGCCAGGCGAGGTaGGAACCGGGAGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: GELWRTSSGWRRHGTPSQKCQAR*EPGGLT
Trigger: TGTGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTT...TTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCGGACTGCCTGGGCTCTaGAGTTTCGTCCCAACTGTC +
Preference number: 4 (lower is better)
Translates to: RPNCLRLCWGNTLPGRAAGLPGL*SFVPTV
Trigger: GACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCC...GGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp GAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGACACCCAGAAGGGACGGGCATCAAATCTCTaGTGGAAGGTGGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: EPGGLTTQPPPSKDTQKGRASNL*WKVAVR
Trigger: ACGCACAGCCACCTTCCAGCAGAGATTTGATGCCCG...TCCCTTCTGGGTGTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp CGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCTGGGGCACCGTGGTCTaGTGCTTGCGAGAGTTCAAC +
Preference number: 4 (lower is better)
Translates to: RPNCLRLCWGNTLPGRAAWGTVV*CLREFN
Trigger: GTTGAACTCTCGCAAGCAGCAGACCACGGTGCCCCA...GGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp GGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCAAGAGGCCTGAGACCTaGTCCCCACCCAGGCACCTC +
Preference number: 4 (lower is better)
Translates to: GSEVSSQLSAPMLGKHLAKRPET*SPPRHL
Trigger: GAGGTGCCTGGGTGGGGAGCAGGTCTCAGGCCTCTT...GGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAGCTGTGCGTGTTGACTaGCTGAGAAGGCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GTAWALKFRPNCLRLCWGAVRVD*LRRPCW
Trigger: CCAGCAAGGCCTTCTCAGCCAGTCAACACGCACAGC...TCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp CGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCGCTGTGCGTGTTGACTaGCTGAGAAGGCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RPNCLRLCWGNTLPGRAAAVRVD*LRRPCW
Trigger: CCAGCAAGGCCTTCTCAGCCAGTCAACACGCACAGC...GGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp GGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGACTTAGCCCAGCCATGTaGTGGAGAAAGCCGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GTAWALKFRPNCLRLCWGLSPAM*WRKPPE
Trigger: CTCAGGCGGCTTTCTCCACCACATGGCTGGGCTAAG...TCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp CACAAAACCAGGGTGTGGTTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTCATCCGCTACCCCAGGATaGACCAGTCGAGCTCGCTTG +
Preference number: 4 (lower is better)
Translates to: HKTRVWLSARRGENREGSSATPG*TSRARL
Trigger: CAAGCGAGCTCGACTGGTCCATCCTGGGGTAGCGGA...TGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAACCACACCCTGGTTTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCTCCGCTACCCCAGGATaGACCAGTCGAGCTCGCTTG +
Preference number: 4 (lower is better)
Translates to: AKSLDRLFPAVQPHPALASATPG*TSRARL
Trigger: CAAGCGAGCTCGACTGGTCCATCCTGGGGTAGCGGA...GGCAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCCTCTGCCCCCACTTCTaGCTGCCTCACTCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: KVNSGELPLGGDDTGLQALCPHF*LPHSPA
Trigger: AGCAGGGGAGTGAGGCAGCCAGAAGTGGGGGCAGAG...GGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAACTCTGCCCCCACTTCTaGCTGCCTCACTCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: GELWRTSSGWRRHGTPSQLCPHF*LPHSPA
Trigger: AGCAGGGGAGTGAGGCAGCCAGAAGTGGGGGCAGAG...TTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGCTCTCAGGCCGACCTaGCTCCCGTCAGGACACCAG +
Preference number: 4 (lower is better)
Translates to: SGELPLGGDDTGLQAKSLALRPT*LPSGHQ
Trigger: CTGGTGTCCTGACGGGAGCCAGGTCGGCCTGAGAGC...TAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGACACCCAGAAGGGAGAAGGGAAAGAGAGCTaGGGTGGGGCATTCAGCACA +
Preference number: 4 (lower is better)
Translates to: EPGGLTTQPPPSKDTQKGEGKES*GGAFST
Trigger: TGTGCTGAATGCCCCACCCCAGCTCTCTTTCCCTTC...TCCCTTCTGGGTGTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGACACCACAAAACCAGGGTGTaGTTAAGTGCCAGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: GEVRTGRAHNTAPSQQRHHKTRV*LSARRG
Trigger: ACCTCGCCTGGCACTTAACCACACCCTGGTTTTGTG...GTGTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCACTAGTGAGGCCTGGAGCCACCAACCAGAAGAGAGCTaGCGGCTACACAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: FPAVQPHPALATSEAWSHQPEES*RLHKTR
Trigger: CCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTG...GTGGCTCCAGGCCTCACTAGTGGCAAGGGCAGGATGAGGCTGCACCGCTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGACACCCAGAAGGGACCCCTTGGTGGCAGCTaGATATATGCCTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: EPGGLTTQPPPSKDTQKGPLGGS*IYASRH
Trigger: ATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGG...TCCCTTCTGGGTGTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGACACAACAGTGCCCCTTGGTaGCAGCTGGATATATGCCTC +
Preference number: 4 (lower is better)
Translates to: GEVRTGRAHNTAPSQQRHNSAPW*QLDICL
Trigger: GAGGCATATATCCAGCTGCCACCAAGGGGCACTGTT...GTGTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GACAGAGGAGCGGCACAGCTCTCAGGCCGACCTGGCTCCCGTCAGGACACCAGGGGTCACTCACATAAGTaGGAACAAACAGTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: DRGAAQLSGRPGSRQDTRGHSHK*EQTVPL
Trigger: AAGGGGCACTGTTTGTTCCCACTTATGTGAGTGACC...CCTGGTGTCCTGACGGGAGCCAGGTCGGCCTGAGAGCTGTGCCGCTCCTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGCTGGTCATGGATGGATaGGGTCACTCACATAAGTGG +
Preference number: 4 (lower is better)
Translates to: ARRGENREGSQHSPLPAKLVMDG*GHSHKW
Trigger: CCACTTATGTGAGTGACCCCATCCATCCATGACCAG...CTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGACACCCAGAAGGGATGTCTGCGCCTATGCTaGGGAAACACCTTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: EPGGLTTQPPPSKDTQKGCLRLC*GNTLPG
Trigger: ACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACA...TCCCTTCTGGGTGTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGGGTGGCTGTGCGTGTTaGCTGGCTGAGAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VNSGELPLGGDDTGLQAKGGCAC*LAEKAL
Trigger: CAAGGCCTTCTCAGCCAGTCAACACGCACAGCCACC...CTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACCACTGTCCTGGTGGAGAAAGCCGCCTaGGGCTGCAAACTTCATCTG +
Preference number: 4 (lower is better)
Translates to: APWWQLDICLQASLTTVLVEKAA*GCKLHL
Trigger: CAGATGAAGTTTGCAGCCTCAGGCGGCTTTCTCCAC...CAGGACAGTGGTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp GGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAAAATCAGCTTGGGGCTaGGGCTCGGGGAGGCACACA +
Preference number: 4 (lower is better)
Translates to: GELWRTSSGWRRHGTPSQKSAWG*GSGRHT
Trigger: TGTGTGCCTCCCCGAGCCTCAGCCCCAAGCTGATTT...TTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp AAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAATCAGCTTGGGGCTaGGGCTCGGGGAGGCACACA +
Preference number: 4 (lower is better)
Translates to: KVNSGELPLGGDDTGLQAKSAWG*GSGRHT
Trigger: TGTGTGCCTCCCCGAGCCTCAGCCCCAAGCTGATTT...GGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp AAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCCCAGGCACCTCCACTaGCAAGACAGAGGAGCGGCA +
Preference number: 4 (lower is better)
Translates to: KGKVNSGELPLGGDDTGLPRHLH*QDRGAA
Trigger: TGCCGCTCCTCTGTCTTGTCAGTGGAGGTGCCTGGG...GAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTCCCAGGCACCTCCACTaGCAAGACAGAGGAGCGGCA +
Preference number: 4 (lower is better)
Translates to: QAKSLDRLFPAVQPHPALPRHLH*QDRGAA
Trigger: TGCCGCTCCTCTGTCTTGTCAGTGGAGGTGCCTGGG...AAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGATGCACAATGGGAGGCTaGGCCTTTCAAAGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: GTAWALKFRPNCLRLCWGCTMGG*AFQRPN
Trigger: GTTGGGCCTTTGAAAGGCTCAGCCTCCCATTGTGCA...TCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp GGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCAAGTGCCAGGCGAGGTaGGAACCGGGAGGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: GSEVSSQLSAPMLGKHLAKCQAR*EPGGLL
Trigger: CAAAAGCCCTCCCGGTTCTCACCTCGCCTGGCACTT...GGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617178.4
CDS-3UTR GCA 90 bp GCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCAGATGTCCGCCATCTTaGTCCGCCGAGCAAGCCGAA +
Preference number: 4 (lower is better)
Translates to: AKSLDRLFPAVQPHPALARCPPS*SAEQAE
Trigger: TTCGGCTTGCTCGGCGGAGCAAGATGGCGGACATCT...GGCAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
CDS-3UTR GCA 90 bp GCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCTGGGGCACCGTGGTCTaGTGCTTGCGAGAGTTCAAC +
Preference number: 4 (lower is better)
Translates to: AKSLDRLFPAVQPHPALAWGTVV*CLREFN
Trigger: GTTGAACTCTCGCAAGCAGCAGACCACGGTGCCCCA...GGCAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp TTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCACTAGTGAGGCCTGGAGCCACTGGAAAGCTTGGAACTaGTTAGCCCAGCCATGTGGT +
Preference number: 4 (lower is better)
Translates to: FPAVQPHPALATSEAWSHWKAWN*LAQPCG
Trigger: ACCACATGGCTGGGCTAAGCAGTTCCAAGCTTTCCA...GTGGCTCCAGGCCTCACTAGTGGCAAGGGCAGGATGAGGCTGCACCGCTGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp TGGGAGGCTGAGCCTTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAGGCAGAGTTCACCCTaGGAGGCAGCTCGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: WEAEPFKGPTRRELAATQRQSSP*EAARSP
Trigger: AGGAGAGCGAGCTGCCTCGCAGGGTGAACTCTGCCT...TTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAAGGCTCAGCCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGCCCCCACTTCTGGCTaGCTCACTCCCCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: GELWRTSSGWRRHGTPSQAPTSG*LTPLLK
Trigger: TTTGAGCAGGGGAGTGAGGCAGCCAGAAGTGGGGGC...TTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp TCATTCAGGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGAAGAGGCCTGAGACCTaGTCCCCACCCAGGCACCTC +
Preference number: 4 (lower is better)
Translates to: SFRDCLGSEVSSQLSAPMKRPET*SPPRHL
Trigger: GAGGTGCCTGGGTGGGGAGCAGGTCTCAGGCCTCTT...CATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCCTGAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp AAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCAAGAGGCCTGAGACCTaGTCCCCACCCAGGCACCTC +
Preference number: 4 (lower is better)
Translates to: KGELWRTSSGWRRHGTPSKRPET*SPPRHL
Trigger: GAGGTGCCTGGGTGGGGAGCAGGTCTCAGGCCTCTT...GCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp CCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCTGCTGGCAGCTGGATATATaGCTCCAGGCATCCCTGACC +
Preference number: 4 (lower is better)
Translates to: PTVCAYAGETPCLVELPCWQLDI*LQASLT
Trigger: GGTCAGGGATGCCTGGAGGCATATATCCAGCTGCCA...GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp GGCTGCGTGGTCACAGAGGCCCCTGAGGACTTGAAGAGTGCCTTCAGGATGGTGAGTGGGAACAAACAGTaGCCCTTGGTGGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GCVVTEAPEDLKSAFRMVSGNKQ*PLVAAG
Trigger: TCCAGCTGCCACCAAGGGGCACTGTTTGTTCCCACT...CACCATCCTGAAGGCACTCTTCAAGTCCTCAGGGGCCTCTGTGACCACGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR GCA 90 bp GGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGCTGGTAGAGCTGCCCTaGTCCCTTGACTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GGDDTGLQAKSLDRLFPALVELP*SLDSSS
Trigger: GGAGGAGGAGTCAAGGGAGCAGGGCAGCTCTACCAG...CGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGGCTGGGGAAACACCTTaGCTGGTAGAGCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: VNSGELPLGGDDTGLQAKAGETP*LVELPC
Trigger: GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGC...CTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GAGGAAGCTCTTTATCCCTGGCAACCCTTCCCACAATCAGGGGTCTCCAGTCCGGCTGGGGAAACACCTTaGCTGGTAGAGCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: EEALYPWQPFPQSGVSSPAGETP*LVELPC
Trigger: GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGC...CGGACTGGAGACCCCTGATTGTGGGAAGGGTTGCCAGGGATAAAGAGCTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGACACCCAGAAGGGATGGTCATTCAGGGACTaGCTGGGCTCTGAAGTTTCG +
Preference number: 4 (lower is better)
Translates to: EPGGLTTQPPPSKDTQKGWSFRD*LGSEVS
Trigger: CGAAACTTCAGAGCCCAGGCAGTCCCTGAATGACCA...TCCCTTCTGGGTGTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp CACCCAGGCACCTCCACTGACAAGACAGAGGAGCGGCACAGCTCTCAGGCCGACCAACCAGAAGATACCTaGTTTGGGATGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: HPGTSTDKTEERHSSQADQPEDT*FGMRGR
Trigger: CCTCCCTCTCATCCCAAAGCAGGTATCTTCTGGTTG...GTCGGCCTGAGAGCTGTGCCGCTCCTCTGTCTTGTCAGTGGAGGTGCCTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TTCTGGCTGCCTCACTCCCCTGCTCAAAGCTTGATTTTGAATTCTGTGGGCTGCACCTGGCGGGGCTTCTaGGGCACCGTGGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FWLPHSPAQSLILNSVGCTWRGF*GTVVCC
Trigger: GCAGCAGACCACGGTGCCCCAGAAGCCCCGCCAGGT...GCAGCCCACAGAATTCAAAATCAAGCTTTGAGCAGGGGAGTGAGGCAGCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR CCA 90 bp CACCCAGGCACCTCCACTGACAAGACAGAGGAGCGGCACAGCTCTCAGGCCGACGGAGGGCCTTGGACATaGAAAGCTTGGAACTGCTTA +
Preference number: 4 (lower is better)
Translates to: HPGTSTDKTEERHSSQADGGPWT*KAWNCL
Trigger: TAAGCAGTTCCAAGCTTTCCATGTCCAAGGCCCTCC...GTCGGCCTGAGAGCTGTGCCGCTCCTCTGTCTTGTCAGTGGAGGTGCCTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGACACCCAGAAGGGACAGCTGGCAGCTCTTTaGGGGGTTCTTCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: EPGGLTTQPPPSKDTQKGQLAAL*GVLPCS
Trigger: TGAACAAGGAAGAACCCCCCAAAGAGCTGCCAGCTG...TCCCTTCTGGGTGTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCCCACGCTGCATCCCATaGGGCCACAAGAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: GSEVSSQLSAPMLGKHLAPRCIP*GHKKAT
Trigger: GGTGGCTTTCTTGTGGCCCCATGGGATGCAGCGTGG...GGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCCTGGAGAACTTCCTCTaGGTGGAGACGACACGGGAC +
Preference number: 4 (lower is better)
Translates to: AKSLDRLFPAVQPHPALALENFL*VETTRD
Trigger: GTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAG...GGCAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCCCCTTGGTGGCAGCTaGATATATGCCTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: RPNCLRLCWGNTLPGRAAPLGGS*IYASRH
Trigger: ATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGG...GGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp GGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGACACACAAACAGTGCCCCTTaGTGGCAGCTGGATATATGC +
Preference number: 4 (lower is better)
Translates to: GEVRTGRAHNTAPSQQRHTNSAP*WQLDIC
Trigger: GCATATATCCAGCTGCCACCAAGGGGCACTGTTTGT...GTGTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CCCAGGATGGACCAGTCGAGCTCGCTTGAGGGCCCCACACACACAGAAAAGCTCTGTCTGCGCCTATGCTaGGGAAACACCTTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: PRMDQSSSLEGPTHTEKLCLRLC*GNTLPG
Trigger: ACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACA...GAGCTTTTCTGTGTGTGTGGGGCCCTCAAGCGAGCTCGACTGGTCCATCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR TCA 90 bp GAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGTGCGTGTTGACTGGCTaGGAAGGCCTTGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: ELWRTSSGWRRHGTPSQECVLTG*EGLAGS
Trigger: GGATCCAGCAAGGCCTTCTCAGCCAGTCAACACGCA...CTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCTGCGTGTTGACTGGCTaGGAAGGCCTTGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: LQAKSLDRLFPAVQPHPACVLTG*EGLAGS
Trigger: GGATCCAGCAAGGCCTTCTCAGCCAGTCAACACGCA...GGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp AACAAACAGTGCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACGGTGGCTGTGCGTGTTaGCTGGCTGAGAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: NKQCPLVAAGYMPPGIPDGGCAC*LAEKAL
Trigger: CAAGGCCTTCTCAGCCAGTCAACACGCACAGCCACC...GTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp GGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTTTGAGCCGGGCATCTaGGAGGCCAATCTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: GSEVSSQLSAPMLGKHLAFEPGI*EANLLP
Trigger: CGGCAGAAGATTGGCCTCTCAGATGCCCGGCTCAAA...GGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp GCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCCAATGGGTGGGTTTATaGAGGCAGCAGGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: AKSLDRLFPAVQPHPALAQWVGL*RQQGNS
Trigger: GGAGTTCCCCTGCTGCCTTCATAAACCCACCCATTG...GGCAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp AACAAACAGTGCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACCCGGCAGGATGGGGATaGAGTGGTGCCATGGCTTTC +
Preference number: 4 (lower is better)
Translates to: NKQCPLVAAGYMPPGIPDPAGWG*SGAMAF
Trigger: GAAAGCCATGGCACCACTTCATCCCCATCCTGCCGG...GTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCTCTGAACCACTTTGGTaGGAGGGAGGGCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: AKSLDRLFPAVQPHPALASEPLW*EGGPWT
Trigger: TGTCCAAGGCCCTCCCTCTCACCAAAGTGGTTCAGA...GGCAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp TTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCACTAGTGAGGCCTGGAGCCACACATTCCCATTCATGTaGAGGTTGCACTTCATCGGC +
Preference number: 4 (lower is better)
Translates to: FPAVQPHPALATSEAWSHTFPFM*RLHFIG
Trigger: GCCGATGAAGTGCAACCTTCACATGAATGGGAATGT...GTGGCTCCAGGCCTCACTAGTGGCAAGGGCAGGATGAGGCTGCACCGCTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGACACCCAGAAGGGACAGGATGGGCTGGTCTaGGGTGATAACATTCCCATT +
Preference number: 4 (lower is better)
Translates to: EPGGLTTQPPPSKDTQKGQDGLV*GDNIPI
Trigger: AATGGGAATGTTATCACCTCAGACCAGCCCATCCTG...TCCCTTCTGGGTGTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CCCAGGATGGACCAGTCGAGCTCGCTTGAGGGCCCCACACACACAGAAAAGCTCGCTCTCCTTTTTCATTaGTGGGCTGTCACTCAGCCG +
Preference number: 4 (lower is better)
Translates to: PRMDQSSSLEGPTHTEKLALLFH*WAVTQP
Trigger: CGGCTGAGTGACAGCCCATCAATGAAAAAGGAGAGC...GAGCTTTTCTGTGTGTGTGGGGCCCTCAAGCGAGCTCGACTGGTCCATCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR TCA 90 bp CGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCGCTCTCCTTTTTCATTaGTGGGCTGTCACTCAGCCG +
Preference number: 4 (lower is better)
Translates to: RPNCLRLCWGNTLPGRAAALLFH*WAVTQP
Trigger: CGGCTGAGTGACAGCCCATCAATGAAAAAGGAGAGC...GGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCGCGGGTCCCATCCAGTaGGGAAGCTCTTTATCCCTG +
Preference number: 4 (lower is better)
Translates to: GSEVSSQLSAPMLGKHLAAGPIQ*GSSLSL
Trigger: CAGGGATAAAGAGCTTCCTCACTGGATGGGACCCGC...GGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CACCCAGGCACCTCCACTGACAAGACAGAGGAGCGGCACAGCTCTCAGGCCGACAGGAAAAGGGAAAGGTaGACTCTGGAGAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: HPGTSTDKTEERHSSQADRKRER*TLENFL
Trigger: GAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCT...GTCGGCCTGAGAGCTGTGCCGCTCCTCTGTCTTGTCAGTGGAGGTGCCTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGAAAGTGCCAGGCGAGGTaGGAACCGGGAGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: ELPLGGDDTGLQAKSLDRKCQAR*EPGGLT
Trigger: TGTGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTT...TCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCTCTGGATGGTTTTGGTaGGCTTCAGAGCAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: RPNCLRLCWGNTLPGRAASGWFW*ASEQGS
Trigger: TGACCCCTGCTCTGAAGCTCACCAAAACCATCCAGA...GGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348657.6
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp AAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAGATGTCCGCCATCTTaGTCCGCCGAGCAAGCCGAA +
Preference number: 4 (lower is better)
Translates to: KVNSGELPLGGDDTGLQARCPPS*SAEQAE
Trigger: TTCGGCTTGCTCGGCGGAGCAAGATGGCGGACATCT...GGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
CDS-3UTR GCA 90 bp GGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAGAGAGGCCAATCTTCTaGCGGGCATCAAATCTCTGC +
Preference number: 4 (lower is better)
Translates to: GTAWALKFRPNCLRLCWGERPIF*RASNLC
Trigger: GCAGAGATTTGATGCCCGGCAGAAGATTGGCCTCTC...TCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp CTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACTCAGGCAGAGTTCACCCTaGGAGGCAGCTCGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LPLGGDDTGLQAKSLDRLRQSSP*EAARSP
Trigger: AGGAGAGCGAGCTGCCTCGCAGGGTGAACTCTGCCT...GAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp TTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTAGAGCCACCCTCCTCTaGCCCCACTTCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: FQRPNQKRAGGYTKPGCGRATLL*PHFWLP
Trigger: AGGCAGCCAGAAGTGGGGGCAGAGGAGGGTGGCTCT...ACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp TCATTCAGGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGGACTCTTCCCAGCGGTaGAGCCTCATCCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: SFRDCLGSEVSSQLSAPMDSSQR*SLILPL
Trigger: CAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTC...CATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCCTGAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp ACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCTGGTAGAGCTGCCCTaGTCCCTTGACTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TGLQAKSLDRLFPAVQPHLVELP*SLDSSS
Trigger: GGAGGAGGAGTCAAGGGAGCAGGGCAGCTCTACCAG...ATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCTGGGGAAACACCTTaGCTGGTAGAGCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLAGETP*LVELPC
Trigger: GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGC...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp TCATTCAGGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGGCTGGGGAAACACCTTaGCTGGTAGAGCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SFRDCLGSEVSSQLSAPMAGETP*LVELPC
Trigger: GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGC...CATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCCTGAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp CCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCTGCAACTGTCTGCGCCTATaGTGGGGAAACACCTTGCCT +
Preference number: 4 (lower is better)
Translates to: PTVCAYAGETPCLVELPCNCLRL*WGNTLP
Trigger: AGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTT...GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp GCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCCTGAGAAGGCCTTGCTaGATCCCAACTCGAGATCGG +
Preference number: 4 (lower is better)
Translates to: AKSLDRLFPAVQPHPALALRRPC*IPTRDR
Trigger: CCGATCTCGAGTTGGGATCCAGCAAGGCCTTCTCAG...GGCAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGCTGTGCGTGTTGACTaGCTGAGAAGGCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GELWRTSSGWRRHGTPSQAVRVD*LRRPCW
Trigger: CCAGCAAGGCCTTCTCAGCCAGTCAACACGCACAGC...TTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCGCTGTGCGTGTTGACTaGCTGAGAAGGCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: KVNSGELPLGGDDTGLQAAVRVD*LRRPCW
Trigger: CCAGCAAGGCCTTCTCAGCCAGTCAACACGCACAGC...GGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp ATTGATGGGCTGTCACTCAGCCGCAGCAGGATGGGCTGGTCTGAGGTGATAACAGCTTCTGGGGCACCGTaGTCTGCTGCTTGCGAGAGT +
Preference number: 4 (lower is better)
Translates to: IDGLSLSRSRMGWSEVITASGAP*SAACES
Trigger: ACTCTCGCAAGCAGCAGACCACGGTGCCCCAGAAGC...TGTTATCACCTCAGACCAGCCCATCCTGCTGCGGCTGAGTGACAGCCCATCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR CCA 90 bp CTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCACCTGGCGGGGCTTCTaGGGCACCGTGGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LTSSIQISSKPKHCTMGGTWRGF*GTVVCC
Trigger: GCAGCAGACCACGGTGCCCCAGAAGCCCCGCCAGGT...GCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp GGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGACACTGTCCCAATGGGTaGGTTTATGAAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GTAWALKFRPNCLRLCWGHCPNG*VYEGSR
Trigger: CCTGCTGCCTTCATAAACCCACCCATTGGGACAGTG...TCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp AAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCAGCCCAGCCATGTGGTaGAGAAAGCCGCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: KGELWRTSSGWRRHGTPSSPAMW*RKPPEA
Trigger: AGCCTCAGGCGGCTTTCTCCACCACATGGCTGGGCT...GCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTAGCCCAGCCATGTGGTaGAGAAAGCCGCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLSPAMW*RKPPEA
Trigger: AGCCTCAGGCGGCTTTCTCCACCACATGGCTGGGCT...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp GGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCCTTAGCCCAGCCATGTaGTGGAGAAAGCCGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GSEVSSQLSAPMLGKHLALSPAM*WRKPPE
Trigger: CTCAGGCGGCTTTCTCCACCACATGGCTGGGCTAAG...GGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp TGGGAGGCTGAGCCTTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAACTTAGCCCAGCCATGTaGTGGAGAAAGCCGCCTGAG +
Preference number: 4 (lower is better)
Translates to: WEAEPFKGPTRRELAATQLSPAM*WRKPPE
Trigger: CTCAGGCGGCTTTCTCCACCACATGGCTGGGCTAAG...TTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAAGGCTCAGCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp GCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACCACTGTCCTGCAGCTGGCAGCTCTTTaGGGGGTTCTTCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: APWWQLDICLQASLTTVLQLAAL*GVLPCS
Trigger: TGAACAAGGAAGAACCCCCCAAAGAGCTGCCAGCTG...CAGGACAGTGGTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTTCCGCTACCCCAGGATaGACCAGTCGAGCTCGCTTG +
Preference number: 4 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLSATPG*TSRARL
Trigger: CAAGCGAGCTCGACTGGTCCATCCTGGGGTAGCGGA...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCCTGGAGAACTTCCTCTaGGTGGAGACGACACGGGAC +
Preference number: 4 (lower is better)
Translates to: KVNSGELPLGGDDTGLQALENFL*VETTRD
Trigger: GTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAG...GGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CACAAAACCAGGGTGTGGTTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTCAGAAGGGAAAGAGAGCTaGGGTGGGGCATTCAGCACA +
Preference number: 4 (lower is better)
Translates to: HKTRVWLSARRGENREGSEGKES*GGAFST
Trigger: TGTGCTGAATGCCCCACCCCAGCTCTCTTTCCCTTC...TGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAACCACACCCTGGTTTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGACAACCAGAAGAGAGCTaGCGGCTACACAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: GTAWALKFRPNCLRLCWGQPEES*RLHKTR
Trigger: CCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTG...TCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp TTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAACAAACAGTGCCCCTTaGTGGCAGCTGGATATATGC +
Preference number: 4 (lower is better)
Translates to: LSARRGENREGSQHSPLPTNSAP*WQLDIC
Trigger: GCATATATCCAGCTGCCACCAAGGGGCACTGTTTGT...TGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CACCCAGGCACCTCCACTGACAAGACAGAGGAGCGGCACAGCTCTCAGGCCGACGGTCACTCACATAAGTaGGAACAAACAGTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: HPGTSTDKTEERHSSQADGHSHK*EQTVPL
Trigger: AAGGGGCACTGTTTGTTCCCACTTATGTGAGTGACC...GTCGGCCTGAGAGCTGTGCCGCTCCTCTGTCTTGTCAGTGGAGGTGCCTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCTGTCTGCGCCTATGCTaGGGAAACACCTTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: AKSLDRLFPAVQPHPALACLRLC*GNTLPG
Trigger: ACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACA...GGCAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR CAA 72 bp CTCCAGTCCGATGGCCCATTGGTCATAAGCTTTGCCTaGGGGAAACAGAGCCACCCTCCTCTGCCCCCACTT +
Preference number: 4 (lower is better)
Translates to: LQSDGPLVISFA*GKQSHPPLPPL
Trigger: AAGTGGGGGCAGAGGAGGGTGGCTCTGTTTCCCCAAGGCAAAGCTTATGACCAATGGGCCATCGGACTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp AAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCTGCGTGTTGACTGGCTaGGAAGGCCTTGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: KGKVNSGELPLGGDDTGLCVLTG*EGLAGS
Trigger: GGATCCAGCAAGGCCTTCTCAGCCAGTCAACACGCA...GAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTGCGTGTTGACTGGCTaGGAAGGCCTTGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: LPLGGDDTGLQAKSLDRLCVLTG*EGLAGS
Trigger: GGATCCAGCAAGGCCTTCTCAGCCAGTCAACACGCA...GAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp TCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTATTTGAGCCGGGCATCTaGGAGGCCAATCTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: SGELPLGGDDTGLQAKSLFEPGI*EANLLP
Trigger: CGGCAGAAGATTGGCCTCTCAGATGCCCGGCTCAAA...TAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCAATGGGTGGGTTTATaGAGGCAGCAGGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: ELWRTSSGWRRHGTPSQEQWVGL*RQQGNS
Trigger: GGAGTTCCCCTGCTGCCTTCATAAACCCACCCATTG...CTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GAGGAAGCTCTTTATCCCTGGCAACCCTTCCCACAATCAGGGGTCTCCAGTCCGCCTGGATGGTTTTGGTaGGCTTCAGAGCAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: EEALYPWQPFPQSGVSSPPGWFW*ASEQGS
Trigger: TGACCCCTGCTCTGAAGCTCACCAAAACCATCCAGG...CGGACTGGAGACCCCTGATTGTGGGAAGGGTTGCCAGGGATAAAGAGCTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252115.10
ENST00000445215.5
CDS-3UTR TCA 90 bp TGGGAGGCTGAGCCTTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAGTGGAGAAAGCCGCCTaGGGCTGCAAACTTCATCTG +
Preference number: 4 (lower is better)
Translates to: WEAEPFKGPTRRELAATQVEKAA*GCKLHL
Trigger: CAGATGAAGTTTGCAGCCTCAGGCGGCTTTCTCCAC...TTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAAGGCTCAGCCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp TCATTCAGGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGGGTCACAGAGGCCCCTaGGGACTTGAAGAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: SFRDCLGSEVSSQLSAPMGHRGP*GLEECL
Trigger: AAGGCACTCTTCAAGTCCTCAGGGGCCTCTGTGACC...CATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCCTGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACTCGCGGGTCCCATCCAGTaGGGAAGCTCTTTATCCCTG +
Preference number: 4 (lower is better)
Translates to: LPLGGDDTGLQAKSLDRLAGPIQ*GSSLSL
Trigger: CAGGGATAAAGAGCTTCCTCACTGGATGGGACCCGC...GAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GTTGCACTTCATCGGCTGCCCGTCCAGACACCGGTTGTTGTACTTCTTATATGCAAGTGCCAGGCGAGGTaGGAACCGGGAGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: VALHRLPVQTPVVVLLICKCQAR*EPGGLT
Trigger: TGTGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTT...GCATATAAGAAGTACAACAACCGGTGTCTGGACGGGCAGCCGATGAAGTGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR TCA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGGACTGCCTGGGCTCTaGAGTTTCGTCCCAACTGTC +
Preference number: 4 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLGLPGL*SFVPTV
Trigger: GACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCC...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp CGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCAATCTTGGGAGCTCTTaGGTATCTTCGGCATGTGCC +
Preference number: 4 (lower is better)
Translates to: RPNCLRLCWGNTLPGRAANLGSS*VSSACA
Trigger: GGCACATGCCGAAGATACTCAAGAGCTCCCAAGATT...GGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp GGCTCCCGTCAGGACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTAAGATGTCCGCCATCTTaGTCCGCCGAGCAAGCCGAA +
Preference number: 4 (lower is better)
Translates to: GSRQDTRALHPLHCLKSLRCPPS*SAEQAE
Trigger: TTCGGCTTGCTCGGCGGAGCAAGATGGCGGACATCT...TAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTCCTGACGGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
CDS-3UTR GCA 90 bp GAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGGGCACCGTGGTCTGCTaGTTGCGAGAGTTCAACATC +
Preference number: 4 (lower is better)
Translates to: ELWRTSSGWRRHGTPSQEGTVVC*LREFNI
Trigger: GATGTTGAACTCTCGCAAGCAGCAGACCACGGTGCC...CTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGGTTGTACTTCTTATATaGGGTGATGGCATCGTCCTT +
Preference number: 4 (lower is better)
Translates to: ARRGENREGSQHSPLPAKVVLLI*GDGIVL
Trigger: AAGGACGATGCCATCACCGCATATAAGAAGTACAAC...CTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp TTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTGCCCCCACTTCTGGCTaGCTCACTCCCCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: FQRPNQKRAGGYTKPGCGAPTSG*LTPLLK
Trigger: TTTGAGCAGGGGAGTGAGGCAGCCAGAAGTGGGGGC...ACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp AAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTGACTCTTCCCAGCGGTaGAGCCTCATCCTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: KGKGELWRTSSGWRRHGTDSSQR*SLILPL
Trigger: CAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTC...AGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAATGGCAGCTGGATATATaGCTCCAGGCATCCCTGACC +
Preference number: 4 (lower is better)
Translates to: GELWRTSSGWRRHGTPSQWQLDI*LQASLT
Trigger: GGTCAGGGATGCCTGGAGGCATATATCCAGCTGCCA...TTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp TGGGAGGCTGAGCCTTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAATGGCAGCTGGATATATaGCTCCAGGCATCCCTGACC +
Preference number: 4 (lower is better)
Translates to: WEAEPFKGPTRRELAATQWQLDI*LQASLT
Trigger: GGTCAGGGATGCCTGGAGGCATATATCCAGCTGCCA...TTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAAGGCTCAGCCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp AAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAGTGGGAACAAACAGTaGCCCTTGGTGGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: KVNSGELPLGGDDTGLQASGNKQ*PLVAAG
Trigger: TCCAGCTGCCACCAAGGGGCACTGTTTGTTCCCACT...GGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCCTGAGAAGGCCTTGCTaGATCCCAACTCGAGATCGG +
Preference number: 4 (lower is better)
Translates to: GSEVSSQLSAPMLGKHLALRRPC*IPTRDR
Trigger: CCGATCTCGAGTTGGGATCCAGCAAGGCCTTCTCAG...GGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp AAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCGCTGTGCGTGTTGACTaGCTGAGAAGGCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: KGKVNSGELPLGGDDTGLAVRVD*LRRPCW
Trigger: CCAGCAAGGCCTTCTCAGCCAGTCAACACGCACAGC...GAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGATCTCTGCTGGAAGGTaGCTGTGCGTGTTGACTGGC +
Preference number: 4 (lower is better)
Translates to: VNSGELPLGGDDTGLQAKISAGR*LCVLTG
Trigger: GCCAGTCAACACGCACAGCCACCTTCCAGCAGAGAT...CTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCCGGGCATCAGCAACCTaGCGGGGCTTCTGGGGCACC +
Preference number: 4 (lower is better)
Translates to: ARNKLTSSIQISSKPKHCRASAT*RGFWGT
Trigger: GGTGCCCCAGAAGCCCCGCCAGGTTGCTGATGCCCG...GCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp GCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCCACTGTCCCAATGGGTaGGTTTATGAAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AKSLDRLFPAVQPHPALAHCPNG*VYEGSR
Trigger: CCTGCTGCCTTCATAAACCCACCCATTGGGACAGTG...GGCAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGAAGCCCAGCCATGTGGTaGAGAAAGCCGCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: ELPLGGDDTGLQAKSLDRSPAMW*RKPPEA
Trigger: AGCCTCAGGCGGCTTTCTCCACCACATGGCTGGGCT...TCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp ACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCTTAGCCCAGCCATGTaGTGGAGAAAGCCGCCTGAG +
Preference number: 4 (lower is better)
Translates to: TGLQAKSLDRLFPAVQPHLSPAM*WRKPPE
Trigger: CTCAGGCGGCTTTCTCCACCACATGGCTGGGCTAAG...ATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTCTTAGCCCAGCCATGTaGTGGAGAAAGCCGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLLSPAM*WRKPPE
Trigger: CTCAGGCGGCTTTCTCCACCACATGGCTGGGCTAAG...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp CCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCTGCTGGACATGGAAAGCTTaGAACTGCTTAGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PTVCAYAGETPCLVELPCWTWKA*NCLAQP
Trigger: TGGCTGGGCTAAGCAGTTCCAAGCTTTCCATGTCCA...GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp GGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGATGGACATGGAAAGCTTaGAACTGCTTAGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GTAWALKFRPNCLRLCWGWTWKA*NCLAQP
Trigger: TGGCTGGGCTAAGCAGTTCCAAGCTTTCCATGTCCA...TCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp GGCTGCGTGGTCACAGAGGCCCCTGAGGACTTGAAGAGTGCCTTCAGGATGGTGTGGACATGGAAAGCTTaGAACTGCTTAGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GCVVTEAPEDLKSAFRMVWTWKA*NCLAQP
Trigger: TGGCTGGGCTAAGCAGTTCCAAGCTTTCCATGTCCA...CACCATCCTGAAGGCACTCTTCAAGTCCTCAGGGGCCTCTGTGACCACGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR CCA 90 bp TTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGTGTCCGGGACATGTTaGTCAAGGCTTTTGTTCGAA +
Preference number: 4 (lower is better)
Translates to: LSARRGENREGSQHSPLPVSGTC*SRLLFE
Trigger: TTCGAACAAAAGCCTTGACCAACATGTCCCGGACAC...TGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTGGTGCCTTCCAATaGGCTGAGAACAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LQAKSLDRLFPAVQPHPALGAFQ*AENRLS
Trigger: GCTGAGCCTGTTCTCAGCCCATTGGAAGGCACCAAG...GGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
CDS-3UTR CCA 90 bp GCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCGGGTCTCCAGTCCGATaGCCCATTGGTCATAAGCTT +
Preference number: 4 (lower is better)
Translates to: AKSLDRLFPAVQPHPALAGSPVR*PIGHKL
Trigger: AAGCTTATGACCAATGGGCCATCGGACTGGAGACCC...GGCAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCACGCTGCATCCCATaGGGCCACAAGAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: KGKGELWRTSSGWRRHGTPRCIP*GHKKAT
Trigger: GGTGGCTTTCTTGTGGCCCCATGGGATGCAGCGTGG...AGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTCTGGAGAACTTCCTCTaGGTGGAGACGACACGGGAC +
Preference number: 4 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLLENFL*VETTRD
Trigger: GTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAG...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCGGGAAAGGTGAACTCTaGAGAACTTCCTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: AKSLDRLFPAVQPHPALAGKGEL*RTSSGW
Trigger: CCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCC...GGCAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TGGGAGGCTGAGCCTTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAACCCCTTGGTGGCAGCTaGATATATGCCTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: WEAEPFKGPTRRELAATQPLGGS*IYASRH
Trigger: ATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGG...TTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAAGGCTCAGCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp CTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCCCCTTGGTGGCAGCTaGATATATGCCTCCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LQAKSLDRLFPAVQPHPAPLGGS*IYASRH
Trigger: ATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGG...GGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGACTGGTCATGGATGGATaGGGTCACTCACATAAGTGG +
Preference number: 4 (lower is better)
Translates to: GTAWALKFRPNCLRLCWGLVMDG*GHSHKW
Trigger: CCACTTATGTGAGTGACCCCATCCATCCATGACCAG...TCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp CACCCAGGCACCTCCACTGACAAGACAGAGGAGCGGCACAGCTCTCAGGCCGACAGGAAAATAATCCTCTaGTCATGGATGGATGGGGTC +
Preference number: 4 (lower is better)
Translates to: HPGTSTDKTEERHSSQADRKIIL*SWMDGV
Trigger: GACCCCATCCATCCATGACCAGAGGATTATTTTCCT...GTCGGCCTGAGAGCTGTGCCGCTCCTCTGTCTTGTCAGTGGAGGTGCCTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGTCTGCGCCTATGCTaGGGAAACACCTTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: GSEVSSQLSAPMLGKHLACLRLC*GNTLPG
Trigger: ACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACA...GGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp GAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGAACTCCTCTTCAAGCTaGTCTTCTCCCGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: ELWRTSSGWRRHGTPSQENSSSS*SSPGHQ
Trigger: CTGATGCCCGGGAGAAGATCAGCTTGAAGAGGAGTT...CTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp AAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAACTCCTCTTCAAGCTaGTCTTCTCCCGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: KVNSGELPLGGDDTGLQANSSSS*SSPGHQ
Trigger: CTGATGCCCGGGAGAAGATCAGCTTGAAGAGGAGTT...GGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTCAATGGGTGGGTTTATaGAGGCAGCAGGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: QAKSLDRLFPAVQPHPALQWVGL*RQQGNS
Trigger: GGAGTTCCCCTGCTGCCTTCATAAACCCACCCATTG...AAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp AAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAATGGGTGGGTTTATaGAGGCAGCAGGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: KGKVNSGELPLGGDDTGLQWVGL*RQQGNS
Trigger: GGAGTTCCCCTGCTGCCTTCATAAACCCACCCATTG...GAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp ACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGGATGGTTTTGGTaGGCTTCAGAGCAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TGLQAKSLDRLFPAVQPHPGWFW*ASEQGS
Trigger: TGACCCCTGCTCTGAAGCTCACCAAAACCATCCAGG...ATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000445215.5
CDS-3UTR TCA 90 bp AAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCCTGGATGGTTTTGGTaGGCTTCAGAGCAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: KGELWRTSSGWRRHGTPSPGWFW*ASEQGS
Trigger: TGACCCCTGCTCTGAAGCTCACCAAAACCATCCAGG...GCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000445215.5
CDS-3UTR TCA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGTGGAGAAAGCCGCCTaGGGCTGCAAACTTCATCTG +
Preference number: 4 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLVEKAA*GCKLHL
Trigger: CAGATGAAGTTTGCAGCCTCAGGCGGCTTTCTCCAC...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp AAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCTCTGAACCACTTTGGTaGGAGGGAGGGCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: KGKVNSGELPLGGDDTGLSEPLW*EGGPWT
Trigger: TGTCCAAGGCCCTCCCTCTCACCAAAGTGGTTCAGA...GAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp TTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTTGCCTTCCAATGGGCTaGGAACAGGCTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FQRPNQKRAGGYTKPGCGCLPMG*EQAQQL
Trigger: CAGCTGCTGAGCCTGTTCTCAGCCCATTGGAAGGCA...ACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
CDS-3UTR TCA 90 bp TCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTTATGCCTTCCAATGGGCTaGGAACAGGCTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SKAQPEESWRLHKTRVWLCLPMG*EQAQQL
Trigger: CAGCTGCTGAGCCTGTTCTCAGCCCATTGGAAGGCA...TAACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
CDS-3UTR TCA 90 bp GTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGCGGGGAGGCACACACTaGAAAACACAAGCCTACCTT +
Preference number: 4 (lower is better)
Translates to: VNSGELPLGGDDTGLQAKRGGTH*KTQAYL
Trigger: AAGGTAGGCTTGTGTTTTTCAGTGTGTGCCTCCCCG...CTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp AAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCGGGCATCAAATCTCTaGTGGAAGGTGGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: KGKVNSGELPLGGDDTGLRASNL*WKVAVR
Trigger: ACGCACAGCCACCTTCCAGCAGAGATTTGATGCCCG...GAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp ACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCGGGCATCAAATCTCTaGTGGAAGGTGGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: TGLQAKSLDRLFPAVQPHRASNL*WKVAVR
Trigger: ACGCACAGCCACCTTCCAGCAGAGATTTGATGCCCG...ATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp CTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCGAGAGGCCAATCTTCTaGCGGGCATCAAATCTCTGC +
Preference number: 4 (lower is better)
Translates to: LQAKSLDRLFPAVQPHPAERPIF*RASNLC
Trigger: GCAGAGATTTGATGCCCGGCAGAAGATTGGCCTCTC...GGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp TCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGGCACCGTGGTCTGCTaGTTGCGAGAGTTCAACATC +
Preference number: 4 (lower is better)
Translates to: SGELPLGGDDTGLQAKSLGTVVC*LREFNI
Trigger: GATGTTGAACTCTCGCAAGCAGCAGACCACGGTGCC...TAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp AACAAACAGTGCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACGGCACCGTGGTCTGCTaGTTGCGAGAGTTCAACATC +
Preference number: 4 (lower is better)
Translates to: NKQCPLVAAGYMPPGIPDGTVVC*LREFNI
Trigger: GATGTTGAACTCTCGCAAGCAGCAGACCACGGTGCC...GTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp ACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATTTGAATTCTGTGGGCTaGGTGGTCACAGAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: TGLQAKSLDRLFPAVQPHLNSVG*VVTEAP
Trigger: AGGGGCCTCTGTGACCACGCAGCCCACAGAATTCAA...ATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp AAGAGCACAGGGCAGAACACAACACAGAAAGGCGGGTCCCATCCAGTGAGGAAGTTGAATTCTGTGGGCTaGGTGGTCACAGAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: KSTGQNTTQKGGSHPVRKLNSVG*VVTEAP
Trigger: AGGGGCCTCTGTGACCACGCAGCCCACAGAATTCAA...CTTCCTCACTGGATGGGACCCGCCTTTCTGTGTTGTGTTCTGCCCTGTGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp CAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTTGGCAGCTGGATATATaGCTCCAGGCATCCCTGACC +
Preference number: 4 (lower is better)
Translates to: QAKSLDRLFPAVQPHPALWQLDI*LQASLT
Trigger: GGTCAGGGATGCCTGGAGGCATATATCCAGCTGCCA...AAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp TCATTCAGGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGAGTGGGAACAAACAGTaGCCCTTGGTGGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SFRDCLGSEVSSQLSAPMSGNKQ*PLVAAG
Trigger: TCCAGCTGCCACCAAGGGGCACTGTTTGTTCCCACT...CATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCCTGAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp GAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGAACTGTCTGCGCCTATaGTGGGGAAACACCTTGCCT +
Preference number: 4 (lower is better)
Translates to: ELWRTSSGWRRHGTPSQENCLRL*WGNTLP
Trigger: AGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTT...CTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCCAACCAGAAGATACCTaGTTTGGGATGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: AKSLDRLFPAVQPHPALAQPEDT*FGMRGR
Trigger: CCTCCCTCTCATCCCAAAGCAGGTATCTTCTGGTTG...GGCAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCTGAGAAGGCCTTGCTaGATCCCAACTCGAGATCGG +
Preference number: 4 (lower is better)
Translates to: KGKVNSGELPLGGDDTGLLRRPC*IPTRDR
Trigger: CCGATCTCGAGTTGGGATCCAGCAAGGCCTTCTCAG...GAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTTAGCTGTGCGTGTTGACTaGCTGAGAAGGCCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SKAQPEESWRLHKTRVWLAVRVD*LRRPCW
Trigger: CCAGCAAGGCCTTCTCAGCCAGTCAACACGCACAGC...TAACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp ACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATATCTCTGCTGGAAGGTaGCTGTGCGTGTTGACTGGC +
Preference number: 4 (lower is better)
Translates to: TGLQAKSLDRLFPAVQPHISAGR*LCVLTG
Trigger: GCCAGTCAACACGCACAGCCACCTTCCAGCAGAGAT...ATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AACAAACAGTGCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACATCTCTGCTGGAAGGTaGCTGTGCGTGTTGACTGGC +
Preference number: 4 (lower is better)
Translates to: NKQCPLVAAGYMPPGIPDISAGR*LCVLTG
Trigger: GCCAGTCAACACGCACAGCCACCTTCCAGCAGAGAT...GTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp TTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAAGTTCAACATCTCTCTaGCATCCTGCACTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LSARRGENREGSQHSPLPSSTSL*HPALSL
Trigger: AAGGGAAAGTGCAGGATGCCAGAGAGATGTTGAACT...TGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGACACCCAGAAGGGAAGTTCAACATCTCTCTaGCATCCTGCACTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: EPGGLTTQPPPSKDTQKGSSTSL*HPALSL
Trigger: AAGGGAAAGTGCAGGATGCCAGAGAGATGTTGAACT...TCCCTTCTGGGTGTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCCACTGTCCCAATGGGTaGGTTTATGAAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KVNSGELPLGGDDTGLQAHCPNG*VYEGSR
Trigger: CCTGCTGCCTTCATAAACCCACCCATTGGGACAGTG...GGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCACTGTCCCAATGGGTaGGTTTATGAAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ELWRTSSGWRRHGTPSQEHCPNG*VYEGSR
Trigger: CCTGCTGCCTTCATAAACCCACCCATTGGGACAGTG...CTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGCACTGTCCCAATGGGTaGGTTTATGAAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GGDDTGLQAKSLDRLFPAHCPNG*VYEGSR
Trigger: CCTGCTGCCTTCATAAACCCACCCATTGGGACAGTG...CGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGCTCCCGTCAGGACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTACTTGGTGCCTTCCAATaGGCTGAGAACAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GSRQDTRALHPLHCLKSLLGAFQ*AENRLS
Trigger: GCTGAGCCTGTTCTCAGCCCATTGGAAGGCACCAAG...TAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTCCTGACGGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
CDS-3UTR CCA 90 bp AAGAGCACAGGGCAGAACACAACACAGAAAGGCGGGTCCCATCCAGTGAGGAAGCTTGGTGCCTTCCAATaGGCTGAGAACAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: KSTGQNTTQKGGSHPVRKLGAFQ*AENRLS
Trigger: GCTGAGCCTGTTCTCAGCCCATTGGAAGGCACCAAG...CTTCCTCACTGGATGGGACCCGCCTTTCTGTGTTGTGTTCTGCCCTGTGCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
CDS-3UTR CCA 90 bp AAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCAGAGTGCCTTCAGGATaGTGTCAGGGTCCACTTCGG +
Preference number: 4 (lower is better)
Translates to: KGELWRTSSGWRRHGTPSRVPSG*CQGPLR
Trigger: CCGAAGTGGACCCTGACACCATCCTGAAGGCACTCT...GCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AAGGAAAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGATTCTGTGGGCTGCGTaGTCACAGAGGCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: KEKGKVNSGELPLGGDDTILWAA*SQRPLR
Trigger: CCTCAGGGGCCTCTGTGACCACGCAGCCCACAGAAT...CGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TGGGAGGCTGAGCCTTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAGGGTCTCCAGTCCGATaGCCCATTGGTCATAAGCTT +
Preference number: 4 (lower is better)
Translates to: WEAEPFKGPTRRELAATQGSPVR*PIGHKL
Trigger: AAGCTTATGACCAATGGGCCATCGGACTGGAGACCC...TTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAAGGCTCAGCCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGCTGCGTGGTCACAGAGGCCCCTGAGGACTTGAAGAGTGCCTTCAGGATGGTGGAAGCTCTTTATCCCTaGCAACCCTTCCCACAATCA +
Preference number: 4 (lower is better)
Translates to: GCVVTEAPEDLKSAFRMVEALYP*QPFPQS
Trigger: TGATTGTGGGAAGGGTTGCCAGGGATAAAGAGCTTC...CACCATCCTGAAGGCACTCTTCAAGTCCTCAGGGGCCTCTGTGACCACGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR CCA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTGCTCTCAGGCCGACCTaGCTCCCGTCAGGACACCAG +
Preference number: 4 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLALRPT*LPSGHQ
Trigger: CTGGTGTCCTGACGGGAGCCAGGTCGGCCTGAGAGC...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCGCTCTCAGGCCGACCTaGCTCCCGTCAGGACACCAG +
Preference number: 4 (lower is better)
Translates to: ARNKLTSSIQISSKPKHCALRPT*LPSGHQ
Trigger: CTGGTGTCCTGACGGGAGCCAGGTCGGCCTGAGAGC...GCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp ACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATAGAACTTCCTCTGGGTaGAGACGACACGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: TGLQAKSLDRLFPAVQPHRTSSG*RRHGTP
Trigger: TGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCT...ATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTAGAACTTCCTCTGGGTaGAGACGACACGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLRTSSG*RRHGTP
Trigger: TGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCT...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCTGGAGAACTTCCTCTaGGTGGAGACGACACGGGAC +
Preference number: 4 (lower is better)
Translates to: KGKGELWRTSSGWRRHGTLENFL*VETTRD
Trigger: GTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAG...AGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGGGAAAGGTGAACTCTaGAGAACTTCCTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GELWRTSSGWRRHGTPSQGKGEL*RTSSGW
Trigger: CCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCC...TTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCGGGAAAGGTGAACTCTaGAGAACTTCCTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KVNSGELPLGGDDTGLQAGKGEL*RTSSGW
Trigger: CCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCC...GGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAAAGAGAGCTGGGGTaGGGCATTCAGCACAACTCA +
Preference number: 4 (lower is better)
Translates to: GELWRTSSGWRRHGTPSQERELG*GIQHNS
Trigger: TGAGTTGTGCTGAATGCCCCACCCCAGCTCTCTTTC...TTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCGAAAGAGAGCTGGGGTaGGGCATTCAGCACAACTCA +
Preference number: 4 (lower is better)
Translates to: GSEVSSQLSAPMLGKHLAERELG*GIQHNS
Trigger: TGAGTTGTGCTGAATGCCCCACCCCAGCTCTCTTTC...GGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp ACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATGAAGGGAAAGAGAGCTaGGGTGGGGCATTCAGCACA +
Preference number: 4 (lower is better)
Translates to: TGLQAKSLDRLFPAVQPHEGKES*GGAFST
Trigger: TGTGCTGAATGCCCCACCCCAGCTCTCTTTCCCTTC...ATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AAGAGCACAGGGCAGAACACAACACAGAAAGGCGGGTCCCATCCAGTGAGGAAGGAAGGGAAAGAGAGCTaGGGTGGGGCATTCAGCACA +
Preference number: 4 (lower is better)
Translates to: KSTGQNTTQKGGSHPVRKEGKES*GGAFST
Trigger: TGTGCTGAATGCCCCACCCCAGCTCTCTTTCCCTTC...CTTCCTCACTGGATGGGACCCGCCTTTCTGTGTTGTGTTCTGCCCTGTGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCCACAAAACCAGGGTGTaGTTAAGTGCCAGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: GSEVSSQLSAPMLGKHLAHKTRV*LSARRG
Trigger: ACCTCGCCTGGCACTTAACCACACCCTGGTTTTGTG...GGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp CACAAAACCAGGGTGTGGTTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTCACTGGTCATGGATGGATaGGGTCACTCACATAAGTGG +
Preference number: 4 (lower is better)
Translates to: HKTRVWLSARRGENREGSLVMDG*GHSHKW
Trigger: CCACTTATGTGAGTGACCCCATCCATCCATGACCAG...TGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAACCACACCCTGGTTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAATAATCCTCTGGTCATaGATGGATGGGGTCACTCAC +
Preference number: 4 (lower is better)
Translates to: GTAWALKFRPNCLRLCWGIILWS*MDGVTH
Trigger: GTGAGTGACCCCATCCATCCATGACCAGAGGATTAT...TCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp CCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCTGCATAATCCTCTGGTCATaGATGGATGGGGTCACTCAC +
Preference number: 4 (lower is better)
Translates to: PTVCAYAGETPCLVELPCIILWS*MDGVTH
Trigger: GTGAGTGACCCCATCCATCCATGACCAGAGGATTAT...GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
3UTR CAA 72 bp GGGGTCACTCACATAAGTGGGAACAAACAGTGCCCCTaGGTGGCAGCTGGATATATGCCTCCAGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: GVTHISGNKQCP*VAAGYMPPGIP
Trigger: AGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACTGTTTGTTCCCACTTATGTGAGTGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp CTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCGGTGGCTGTGCGTGTTaGCTGGCTGAGAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LTSSIQISSKPKHCTMGGGGCAC*LAEKAL
Trigger: CAAGGCCTTCTCAGCCAGTCAACACGCACAGCCACC...GCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTAACTCCTCTTCAAGCTaGTCTTCTCCCGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLNSSSS*SSPGHQ
Trigger: CTGATGCCCGGGAGAAGATCAGCTTGAAGAGGAGTT...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp AAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCAACTCCTCTTCAAGCTaGTCTTCTCCCGGGCATCAG +
Preference number: 4 (lower is better)
Translates to: KGELWRTSSGWRRHGTPSNSSSS*SSPGHQ
Trigger: CTGATGCCCGGGAGAAGATCAGCTTGAAGAGGAGTT...GCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp TTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTGTGGAGAAAGCCGCCTaGGGCTGCAAACTTCATCTG +
Preference number: 4 (lower is better)
Translates to: FQRPNQKRAGGYTKPGCGVEKAA*GCKLHL
Trigger: CAGATGAAGTTTGCAGCCTCAGGCGGCTTTCTCCAC...ACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp TGGGAGGCTGAGCCTTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAACAATGTCCTCCTCAGTaGCTCGAGGGTGCAGATTAT +
Preference number: 4 (lower is better)
Translates to: WEAEPFKGPTRRELAATQQCPPQ*LEGADY
Trigger: ATAATCTGCACCCTCGAGTCACTGAGGAGGACATTG...TTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAAGGCTCAGCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGCAGGATGGGCTGGTCTaGGGTGATAACATTCCCATT +
Preference number: 4 (lower is better)
Translates to: VNSGELPLGGDDTGLQAKQDGLV*GDNIPI
Trigger: AATGGGAATGTTATCACCTCAGACCAGCCCATCCTG...CTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp AAGGAAAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGTCACAGAGGCCCCTaGGGACTTGAAGAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: KEKGKVNSGELPLGGDDTGHRGP*GLEECL
Trigger: AAGGCACTCTTCAAGTCCTCAGGGGCCTCTGTGACC...CGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCCCCAGGCACCTCCACTaGCAAGACAGAGGAGCGGCA +
Preference number: 4 (lower is better)
Translates to: ARNKLTSSIQISSKPKHCPRHLH*QDRGAA
Trigger: TGCCGCTCCTCTGTCTTGTCAGTGGAGGTGCCTGGG...GCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp AAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTTGCACAATGGGAGGCTaGGCCTTTCAAAGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: KGKGELWRTSSGWRRHGTCTMGG*AFQRPN
Trigger: GTTGGGCCTTTGAAAGGCTCAGCCTCCCATTGTGCA...AGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp TTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTTGCACAATGGGAGGCTaGGCCTTTCAAAGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: FQRPNQKRAGGYTKPGCGCTMGG*AFQRPN
Trigger: GTTGGGCCTTTGAAAGGCTCAGCCTCCCATTGTGCA...ACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp AAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAATCTTGGGAGCTCTTaGGTATCTTCGGCATGTGCC +
Preference number: 4 (lower is better)
Translates to: KVNSGELPLGGDDTGLQANLGSS*VSSACA
Trigger: GGCACATGCCGAAGATACTCAAGAGCTCCCAAGATT...GGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTTGGCTGAGAAGGCCTTaGTGGATCCCAACTCGAGAT +
Preference number: 4 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLWLRRP*WIPTRD
Trigger: ATCTCGAGTTGGGATCCAGCAAGGCCTTCTCAGCCA...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp AAGAGCACAGGGCAGAACACAACACAGAAAGGCGGGTCCCATCCAGTGAGGAAGGAGAGGCCAATCTTCTaGCGGGCATCAAATCTCTGC +
Preference number: 4 (lower is better)
Translates to: KSTGQNTTQKGGSHPVRKERPIF*RASNLC
Trigger: GCAGAGATTTGATGCCCGGCAGAAGATTGGCCTCTC...CTTCCTCACTGGATGGGACCCGCCTTTCTGTGTTGTGTTCTGCCCTGTGCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GAGGAAGCTCTTTATCCCTGGCAACCCTTCCCACAATCAGGGGTCTCCAGTCCGAATCGGGCATCTTTCTaGAAAAGCTTCTCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: EEALYPWQPFPQSGVSSPNRASF*KSFSRA
Trigger: TGCCCGGGAGAAGCTTTTGCAGAAAGATGCCCGATT...CGGACTGGAGACCCCTGATTGTGGGAAGGGTTGCCAGGGATAAAGAGCTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp TGGGAGGCTGAGCCTTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAATGGAAAGCTTGGAACTaGTTAGCCCAGCCATGTGGT +
Preference number: 4 (lower is better)
Translates to: WEAEPFKGPTRRELAATQWKAWN*LAQPCG
Trigger: ACCACATGGCTGGGCTAAGCAGTTCCAAGCTTTCCA...TTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAAGGCTCAGCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp CGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCTCAGTGACTCGAGGGTaGAGATTATTCACAGTCATC +
Preference number: 4 (lower is better)
Translates to: RPNCLRLCWGNTLPGRAASVTRG*RLFTVI
Trigger: GATGACTGTGAATAATCTGCACCCTCGAGTCACTGA...GGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGACACCCAGAAGGGAGTTGTACTTCTTATATaGGGTGATGGCATCGTCCTT +
Preference number: 4 (lower is better)
Translates to: EPGGLTTQPPPSKDTQKGVVLLI*GDGIVL
Trigger: AAGGACGATGCCATCACCGCATATAAGAAGTACAAC...TCCCTTCTGGGTGTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGATTGAATTCTGTGGGCTaGGTGGTCACAGAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: ELPLGGDDTGLQAKSLDRLNSVG*VVTEAP
Trigger: AGGGGCCTCTGTGACCACGCAGCCCACAGAATTCAA...TCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp ACAACTCAAGGAAAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGAAGAGCCACCCTCCTCTaGCCCCACTTCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TTQGKGKGELWRTSSGWRRATLL*PHFWLP
Trigger: AGGCAGCCAGAAGTGGGGGCAGAGGAGGGTGGCTCT...TCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCTTGAGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTAACTGTCTGCGCCTATaGTGGGGAAACACCTTGCCT +
Preference number: 4 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLNCLRL*WGNTLP
Trigger: AGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTT...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp CAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTTGGTCATTCAGGGACTaGCTGGGCTCTGAAGTTTCG +
Preference number: 4 (lower is better)
Translates to: QAKSLDRLFPAVQPHPALWSFRD*LGSEVS
Trigger: CGAAACTTCAGAGCCCAGGCAGTCCCTGAATGACCA...AAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp AACAAACAGTGCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACGGTGCCATGGCTTTCTaGTGTGGAACCTGGAAACAC +
Preference number: 4 (lower is better)
Translates to: NKQCPLVAAGYMPPGIPDGAMAF*CGTWKH
Trigger: GTGTTTCCAGGTTCCACAGCAGAAAGCCATGGCACC...GTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451060.6
CDS-3UTR CCA 90 bp TCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTTACTGAGAAGGCCTTGCTaGATCCCAACTCGAGATCGG +
Preference number: 4 (lower is better)
Translates to: SKAQPEESWRLHKTRVWLLRRPC*IPTRDR
Trigger: CCGATCTCGAGTTGGGATCCAGCAAGGCCTTCTCAG...TAACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACCACTGTCCTGAGTTCAACATCTCTCTaGCATCCTGCACTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: APWWQLDICLQASLTTVLSSTSL*HPALSL
Trigger: AAGGGAAAGTGCAGGATGCCAGAGAGATGTTGAACT...CAGGACAGTGGTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp CTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCGCTTCTGGGGCACCGTaGTCTGCTGCTTGCGAGAGT +
Preference number: 4 (lower is better)
Translates to: LTSSIQISSKPKHCTMGGASGAP*SAACES
Trigger: ACTCTCGCAAGCAGCAGACCACGGTGCCCCAGAAGC...GCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp GAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCGGGCATCAGCAACCTaGCGGGGCTTCTGGGGCACC +
Preference number: 4 (lower is better)
Translates to: EMESQEQTDLFHSNKLQTRASAT*RGFWGT
Trigger: GGTGCCCCAGAAGCCCCGCCAGGTTGCTGATGCCCG...GGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp CAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTCACTGTCCCAATGGGTaGGTTTATGAAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QAKSLDRLFPAVQPHPALHCPNG*VYEGSR
Trigger: CCTGCTGCCTTCATAAACCCACCCATTGGGACAGTG...AAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACTCAGGATGGGGATGAAGTaGTGCCATGGCTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LPLGGDDTGLQAKSLDRLRMGMK*CHGFLL
Trigger: CAGCAGAAAGCCATGGCACCACTTCATCCCCATCCT...GAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCGTGTCCGGGACATGTTaGTCAAGGCTTTTGTTCGAA +
Preference number: 4 (lower is better)
Translates to: AKSLDRLFPAVQPHPALAVSGTC*SRLLFE
Trigger: TTCGAACAAAAGCCTTGACCAACATGTCCCGGACAC...GGCAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGCTCCCGTCAGGACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTACAGCTGGCAGCTCTTTaGGGGGTTCTTCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GSRQDTRALHPLHCLKSLQLAAL*GVLPCS
Trigger: TGAACAAGGAAGAACCCCCCAAAGAGCTGCCAGCTG...TAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTCCTGACGGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTCAGCTGGCAGCTCTTTaGGGGGTTCTTCCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLQLAAL*GVLPCS
Trigger: TGAACAAGGAAGAACCCCCCAAAGAGCTGCCAGCTG...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCGCAGCAGGATGGGCTaGTCTGAGGTGATAACATTC +
Preference number: 4 (lower is better)
Translates to: KGELWRTSSGWRRHGTPSRSRMG*SEVITF
Trigger: GAATGTTATCACCTCAGACCAGCCCATCCTGCTGCG...GCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTACGCAGCAGGATGGGCTaGTCTGAGGTGATAACATTC +
Preference number: 4 (lower is better)
Translates to: SGELPLGGDDTGLQAKSLRSRMG*SEVITF
Trigger: GAATGTTATCACCTCAGACCAGCCCATCCTGCTGCG...TAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGAAGAGTGCCTTCAGGATaGTGTCAGGGTCCACTTCGG +
Preference number: 4 (lower is better)
Translates to: ELPLGGDDTGLQAKSLDRRVPSG*CQGPLR
Trigger: CCGAAGTGGACCCTGACACCATCCTGAAGGCACTCT...TCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AACAAACAGTGCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACGGGTCTCCAGTCCGATaGCCCATTGGTCATAAGCTT +
Preference number: 4 (lower is better)
Translates to: NKQCPLVAAGYMPPGIPDGSPVR*PIGHKL
Trigger: AAGCTTATGACCAATGGGCCATCGGACTGGAGACCC...GTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCCCACGCTGCATCCCATaGGGCCACAAGAAAGCCACC +
Preference number: 4 (lower is better)
Translates to: LTSSIQISSKPKHCTMGGPRCIP*GHKKAT
Trigger: GGTGGCTTTCTTGTGGCCCCATGGGATGCAGCGTGG...GCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCGGGAAAGGTGAACTCTaGAGAACTTCCTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KGKVNSGELPLGGDDTGLGKGEL*RTSSGW
Trigger: CCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCC...GAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTGAAAGAGAGCTGGGGTaGGGCATTCAGCACAACTCA +
Preference number: 4 (lower is better)
Translates to: QAKSLDRLFPAVQPHPALERELG*GIQHNS
Trigger: TGAGTTGTGCTGAATGCCCCACCCCAGCTCTCTTTC...AAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AAGAGCACAGGGCAGAACACAACACAGAAAGGCGGGTCCCATCCAGTGAGGAAGGAAAGAGAGCTGGGGTaGGGCATTCAGCACAACTCA +
Preference number: 4 (lower is better)
Translates to: KSTGQNTTQKGGSHPVRKERELG*GIQHNS
Trigger: TGAGTTGTGCTGAATGCCCCACCCCAGCTCTCTTTC...CTTCCTCACTGGATGGGACCCGCCTTTCTGTGTTGTGTTCTGCCCTGTGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AGTCGAGCTCGCTTGAGGGCCCCACACACACAGAAAAGCTCAACAATGTCCTCCCACAAAACCAGGGTGTaGTTAAGTGCCAGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: SRARLRAPHTQKSSTMSSHKTRV*LSARRG
Trigger: ACCTCGCCTGGCACTTAACCACACCCTGGTTTTGTG...GGAGGACATTGTTGAGCTTTTCTGTGTGTGTGGGGCCCTCAAGCGAGCTCGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR CCA 90 bp AAGAGCACAGGGCAGAACACAACACAGAAAGGCGGGTCCCATCCAGTGAGGAAGCACAAAACCAGGGTGTaGTTAAGTGCCAGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: KSTGQNTTQKGGSHPVRKHKTRV*LSARRG
Trigger: ACCTCGCCTGGCACTTAACCACACCCTGGTTTTGTG...CTTCCTCACTGGATGGGACCCGCCTTTCTGTGTTGTGTTCTGCCCTGTGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAACCAGAAGAGAGCTaGCGGCTACACAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: KGKVNSGELPLGGDDTGLQPEES*RLHKTR
Trigger: CCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTG...GAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCAACAGTGCCCCTTGGTaGCAGCTGGATATATGCCTC +
Preference number: 4 (lower is better)
Translates to: KGELWRTSSGWRRHGTPSNSAPW*QLDICL
Trigger: GAGGCATATATCCAGCTGCCACCAAGGGGCACTGTT...GCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTAACAGTGCCCCTTGGTaGCAGCTGGATATATGCCTC +
Preference number: 4 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLNSAPW*QLDICL
Trigger: GAGGCATATATCCAGCTGCCACCAAGGGGCACTGTT...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp CACAAAACCAGGGTGTGGTTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTCAATAATCCTCTGGTCATaGATGGATGGGGTCACTCAC +
Preference number: 4 (lower is better)
Translates to: HKTRVWLSARRGENREGSIILWS*MDGVTH
Trigger: GTGAGTGACCCCATCCATCCATGACCAGAGGATTAT...TGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAACCACACCCTGGTTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTTACATTCAGGGACTGCCTaGGCTCTGAAGTTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: SKAQPEESWRLHKTRVWLHSGTA*ALKFRP
Trigger: GGGACGAAACTTCAGAGCCCAGGCAGTCCCTGAATG...TAACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
3UTR CAA 72 bp AGGTTGCACTTCATCGGCTGCCCGTCCAGACACCGGTaGTTGTACTTCTTATATGCGGTGATGGCATCGTCC +
Preference number: 4 (lower is better)
Translates to: RLHFIGCPSRHR*LYFLYAVMASS
Trigger: GGACGATGCCATCACCGCATATAAGAAGTACAACAACCGGTGTCTGGACGGGCAGCCGATGAAGTGCAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR TCA 90 bp GGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCGTGTATGCATCATTCTaGACCACTTTGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GSEVSSQLSAPMLGKHLAVYASF*TTLVRG
Trigger: CCCTCTCACCAAAGTGGTTCAGAATGATGCATACAC...GGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp GTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGGTGTATGCATCATTCTaGACCACTTTGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: VNSGELPLGGDDTGLQAKVYASF*TTLVRG
Trigger: CCCTCTCACCAAAGTGGTTCAGAATGATGCATACAC...CTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp ACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCAATGTCCTCCTCAGTaGCTCGAGGGTGCAGATTAT +
Preference number: 4 (lower is better)
Translates to: TGLQAKSLDRLFPAVQPHQCPPQ*LEGADY
Trigger: ATAATCTGCACCCTCGAGTCACTGAGGAGGACATTG...ATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGCCAGTCGAGCTCGCTTaGGGGCCCCACACACACAGA +
Preference number: 4 (lower is better)
Translates to: QTDLFHSNKLQTQALHNGPVELA*GPHTHR
Trigger: TCTGTGTGTGTGGGGCCCTCAAGCGAGCTCGACTGG...CCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAACTTCTTATATGCGGTaGTGGCATCGTCCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: GTAWALKFRPNCLRLCWGTSYMR*WHRPFS
Trigger: TGAAAAAGGACGATGCCATCACCGCATATAAGAAGT...TCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGACATTCCCATTCATGTaGAGGTTGCACTTCATCGGC +
Preference number: 4 (lower is better)
Translates to: ELWRTSSGWRRHGTPSQETFPFM*RLHFIG
Trigger: GCCGATGAAGTGCAACCTTCACATGAATGGGAATGT...CTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp AAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAGGATGGGCTGGTCTaGGGTGATAACATTCCCATT +
Preference number: 4 (lower is better)
Translates to: KGKVNSGELPLGGDDTGLQDGLV*GDNIPI
Trigger: AATGGGAATGTTATCACCTCAGACCAGCCCATCCTG...GAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTCAGGATGGGCTGGTCTaGGGTGATAACATTCCCATT +
Preference number: 4 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLQDGLV*GDNIPI
Trigger: AATGGGAATGTTATCACCTCAGACCAGCCCATCCTG...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGAGCTCTCCTTTTTCATTaGTGGGCTGTCACTCAGCCG +
Preference number: 4 (lower is better)
Translates to: ELPLGGDDTGLQAKSLDRALLFH*WAVTQP
Trigger: CGGCTGAGTGACAGCCCATCAATGAAAAAGGAGAGC...TCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCAGCCTACCTTGGCGATaGGATGAAGAAACATACTAC +
Preference number: 4 (lower is better)
Translates to: AKSLDRLFPAVQPHPALASLPWR*DEETYY
Trigger: GTAGTATGTTTCTTCATCTCATCGCCAAGGTAGGCT...GGCAAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTAATACACACAAAGCCCAGGCACCTCCACTaGCAAGACAGAGGAGCGGCA +
Preference number: 4 (lower is better)
Translates to: DTRALHPLHCLKSLIHTKPRHLH*QDRGAA
Trigger: TGCCGCTCCTCTGTCTTGTCAGTGGAGGTGCCTGGG...CTTTGTGTGTATTAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAAGGAAAAGGGAAAGGTaGACTCTGGAGAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: GELWRTSSGWRRHGTPSQRKRER*TLENFL
Trigger: GAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCT...TTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp TCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAAATCTTGGGAGCTCTTaGGTATCTTCGGCATGTGCC +
Preference number: 4 (lower is better)
Translates to: SGELPLGGDDTGLQAKSLNLGSS*VSSACA
Trigger: GGCACATGCCGAAGATACTCAAGAGCTCCCAAGATT...TAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGAGAGAGGCCAATCTTCTaGCGGGCATCAAATCTCTGC +
Preference number: 4 (lower is better)
Translates to: ELPLGGDDTGLQAKSLDRERPIF*RASNLC
Trigger: GCAGAGATTTGATGCCCGGCAGAAGATTGGCCTCTC...TCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp AGTCGAGCTCGCTTGAGGGCCCCACACACACAGAAAAGCTCAACAATGTCCTCCAATCGGGCATCTTTCTaGAAAAGCTTCTCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: SRARLRAPHTQKSSTMSSNRASF*KSFSRA
Trigger: TGCCCGGGAGAAGCTTTTGCAGAAAGATGCCCGATT...GGAGGACATTGTTGAGCTTTTCTGTGTGTGTGGGGCCCTCAAGCGAGCTCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR GCA 90 bp AAGGAAAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGCACCGTGGTCTGCTaGTTGCGAGAGTTCAACATC +
Preference number: 4 (lower is better)
Translates to: KEKGKVNSGELPLGGDDTGTVVC*LREFNI
Trigger: GATGTTGAACTCTCGCAAGCAGCAGACCACGGTGCC...CGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp CTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGGGGCACCGTGGTCTaGTGCTTGCGAGAGTTCAAC +
Preference number: 4 (lower is better)
Translates to: LTSSIQISSKPKHCTMGGWGTVV*CLREFN
Trigger: GTTGAACTCTCGCAAGCAGCAGACCACGGTGCCCCA...GCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp TCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTTAATGGGGATGAAGTGGTaGCATGGCTTTCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SKAQPEESWRLHKTRVWLMGMKW*HGFLLW
Trigger: CCACAGCAGAAAGCCATGGCACCACTTCATCCCCAT...TAACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp ACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATTGGAAAGCTTGGAACTaGTTAGCCCAGCCATGTGGT +
Preference number: 4 (lower is better)
Translates to: TGLQAKSLDRLFPAVQPHWKAWN*LAQPCG
Trigger: ACCACATGGCTGGGCTAAGCAGTTCCAAGCTTTCCA...ATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp TCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTATGGAAAGCTTGGAACTaGTTAGCCCAGCCATGTGGT +
Preference number: 4 (lower is better)
Translates to: SGELPLGGDDTGLQAKSLWKAWN*LAQPCG
Trigger: ACCACATGGCTGGGCTAAGCAGTTCCAAGCTTTCCA...TAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp CCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCTGCAGCAGGAGCTGTGTATaGATCATTCTGAACCACTTT +
Preference number: 4 (lower is better)
Translates to: PTVCAYAGETPCLVELPCSRSCV*IILNHF
Trigger: AAAGTGGTTCAGAATGATGCATACACAGCTCCTGCT...GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp GACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTAATACACACAAAGAGAGCCACCCTCCTCTaGCCCCACTTCTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: DTRALHPLHCLKSLIHTKRATLL*PHFWLP
Trigger: AGGCAGCCAGAAGTGGGGGCAGAGGAGGGTGGCTCT...CTTTGTGTGTATTAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGATGGTCATTCAGGGACTaGCTGGGCTCTGAAGTTTCG +
Preference number: 4 (lower is better)
Translates to: ELPLGGDDTGLQAKSLDRWSFRD*LGSEVS
Trigger: CGAAACTTCAGAGCCCAGGCAGTCCCTGAATGACCA...TCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp CAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTCAACCAGAAGATACCTaGTTTGGGATGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QAKSLDRLFPAVQPHPALQPEDT*FGMRGR
Trigger: CCTCCCTCTCATCCCAAAGCAGGTATCTTCTGGTTG...AAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp AACAAACAGTGCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACCAACCAGAAGATACCTaGTTTGGGATGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: NKQCPLVAAGYMPPGIPDQPEDT*FGMRGR
Trigger: CCTCCCTCTCATCCCAAAGCAGGTATCTTCTGGTTG...GTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTGCTTCTGGGGCACCGTaGTCTGCTGCTTGCGAGAGT +
Preference number: 4 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLASGAP*SAACES
Trigger: ACTCTCGCAAGCAGCAGACCACGGTGCCCCAGAAGC...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp TCATTCAGGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGGATGAAGTGGTGCCATaGCTTTCTGCTGTGGAACCT +
Preference number: 4 (lower is better)
Translates to: SFRDCLGSEVSSQLSAPMDEVVP*LSAVEP
Trigger: AGGTTCCACAGCAGAAAGCCATGGCACCACTTCATC...CATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCCTGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACTCGATGAAGTGGTGCCATaGCTTTCTGCTGTGGAACCT +
Preference number: 4 (lower is better)
Translates to: LPLGGDDTGLQAKSLDRLDEVVP*LSAVEP
Trigger: AGGTTCCACAGCAGAAAGCCATGGCACCACTTCATC...GAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGGAGGGCCTTGGACATaGAAAGCTTGGAACTGCTTA +
Preference number: 4 (lower is better)
Translates to: SGELPLGGDDTGLQAKSLGGPWT*KAWNCL
Trigger: TAAGCAGTTCCAAGCTTTCCATGTCCAAGGCCCTCC...TAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TCATTCAGGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGGGAGGGCCTTGGACATaGAAAGCTTGGAACTGCTTA +
Preference number: 4 (lower is better)
Translates to: SFRDCLGSEVSSQLSAPMGGPWT*KAWNCL
Trigger: TAAGCAGTTCCAAGCTTTCCATGTCCAAGGCCCTCC...CATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCCTGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp GGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGTCCGGGACATGTTaGTCAAGGCTTTTGTTCGAA +
Preference number: 4 (lower is better)
Translates to: GGDDTGLQAKSLDRLFPAVSGTC*SRLLFE
Trigger: TTCGAACAAAAGCCTTGACCAACATGTCCCGGACAC...CGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TTCTGGCTGCCTCACTCCCCTGCTCAAAGCTTGATTTTGAATTCTGTGGGCTGCAGAACTTCCTCTGGGTaGAGACGACACGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: FWLPHSPAQSLILNSVGCRTSSG*RRHGTP
Trigger: TGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCT...GCAGCCCACAGAATTCAAAATCAAGCTTTGAGCAGGGGAGTGAGGCAGCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR CCA 90 bp TTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTAACAGTGCCCCTTGGTaGCAGCTGGATATATGCCTC +
Preference number: 4 (lower is better)
Translates to: FQRPNQKRAGGYTKPGCGNSAPW*QLDICL
Trigger: GAGGCATATATCCAGCTGCCACCAAGGGGCACTGTT...ACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCACAAACAGTGCCCCTTaGTGGCAGCTGGATATATGC +
Preference number: 4 (lower is better)
Translates to: KGKVNSGELPLGGDDTGLTNSAP*WQLDIC
Trigger: GCATATATCCAGCTGCCACCAAGGGGCACTGTTTGT...GAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TGGGAGGCTGAGCCTTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAGGTCACTCACATAAGTaGGAACAAACAGTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: WEAEPFKGPTRRELAATQGHSHK*EQTVPL
Trigger: AAGGGGCACTGTTTGTTCCCACTTATGTGAGTGACC...TTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAAGGCTCAGCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp AACAAACAGTGCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACCTGGTCATGGATGGATaGGGTCACTCACATAAGTGG +
Preference number: 4 (lower is better)
Translates to: NKQCPLVAAGYMPPGIPDLVMDG*GHSHKW
Trigger: CCACTTATGTGAGTGACCCCATCCATCCATGACCAG...GTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp GTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGATAATCCTCTGGTCATaGATGGATGGGGTCACTCAC +
Preference number: 4 (lower is better)
Translates to: VNSGELPLGGDDTGLQAKIILWS*MDGVTH
Trigger: GTGAGTGACCCCATCCATCCATGACCAGAGGATTAT...CTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CACAAAACCAGGGTGTGGTTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTCAAGGAAAATAATCCTCTaGTCATGGATGGATGGGGTC +
Preference number: 4 (lower is better)
Translates to: HKTRVWLSARRGENREGSRKIIL*SWMDGV
Trigger: GACCCCATCCATCCATGACCAGAGGATTATTTTCCT...TGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAACCACACCCTGGTTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTTGCGTGTTGACTGGCTaGGAAGGCCTTGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLCVLTG*EGLAGS
Trigger: GGATCCAGCAAGGCCTTCTCAGCCAGTCAACACGCA...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp AAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCCTGCACTTTCCCTTTaGTTCGAAATCGGGCATCTT +
Preference number: 4 (lower is better)
Translates to: KGELWRTSSGWRRHGTPSPALSL*FEIGHL
Trigger: AAGATGCCCGATTTCGAATCAAAGGGAAAGTGCAGG...GCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp TCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTACCTGCACTTTCCCTTTaGTTCGAAATCGGGCATCTT +
Preference number: 4 (lower is better)
Translates to: SGELPLGGDDTGLQAKSLPALSL*FEIGHL
Trigger: AAGATGCCCGATTTCGAATCAAAGGGAAAGTGCAGG...TAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTCCTGCACTTTCCCTTTaGTTCGAAATCGGGCATCTT +
Preference number: 4 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLPALSL*FEIGHL
Trigger: AAGATGCCCGATTTCGAATCAAAGGGAAAGTGCAGG...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp CTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCCAATGGGTGGGTTTATaGAGGCAGCAGGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: LTSSIQISSKPKHCTMGGQWVGL*RQQGNS
Trigger: GGAGTTCCCCTGCTGCCTTCATAAACCCACCCATTG...GCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp TCATTCAGGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGGTGTATGCATCATTCTaGACCACTTTGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SFRDCLGSEVSSQLSAPMVYASF*TTLVRG
Trigger: CCCTCTCACCAAAGTGGTTCAGAATGATGCATACAC...CATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCCTGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp GGCTCCCGTCAGGACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTAGTGTATGCATCATTCTaGACCACTTTGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GSRQDTRALHPLHCLKSLVYASF*TTLVRG
Trigger: CCCTCTCACCAAAGTGGTTCAGAATGATGCATACAC...TAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTCCTGACGGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp ACAACTCAAGGAAAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGATGCCTTCCAATGGGCTaGGAACAGGCTCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TTQGKGKGELWRTSSGWRCLPMG*EQAQQL
Trigger: CAGCTGCTGAGCCTGTTCTCAGCCCATTGGAAGGCA...TCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCTTGAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
CDS-3UTR TCA 90 bp GAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACAATGTCCTCCTCAGTaGCTCGAGGGTGCAGATTAT +
Preference number: 4 (lower is better)
Translates to: ELPLGGDDTGLQAKSLDRQCPPQ*LEGADY
Trigger: ATAATCTGCACCCTCGAGTCACTGAGGAGGACATTG...TCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp TCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAACATTCCCATTCATGTaGAGGTTGCACTTCATCGGC +
Preference number: 4 (lower is better)
Translates to: SGELPLGGDDTGLQAKSLTFPFM*RLHFIG
Trigger: GCCGATGAAGTGCAACCTTCACATGAATGGGAATGT...TAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGAGCCTACCTTGGCGATaGGATGAAGAAACATACTAC +
Preference number: 4 (lower is better)
Translates to: ELWRTSSGWRRHGTPSQESLPWR*DEETYY
Trigger: GTAGTATGTTTCTTCATCTCATCGCCAAGGTAGGCT...CTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp ACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATAGGAAAAGGGAAAGGTaGACTCTGGAGAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: TGLQAKSLDRLFPAVQPHRKRER*TLENFL
Trigger: GAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCT...ATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp AAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCAGGAAAAGGGAAAGGTaGACTCTGGAGAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: KGELWRTSSGWRRHGTPSRKRER*TLENFL
Trigger: GAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCT...GCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGAAATCTTGGGAGCTCTTaGGTATCTTCGGCATGTGCC +
Preference number: 4 (lower is better)
Translates to: ELPLGGDDTGLQAKSLDRNLGSS*VSSACA
Trigger: GGCACATGCCGAAGATACTCAAGAGCTCCCAAGATT...TCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp AAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTAATCTTGGGAGCTCTTaGGTATCTTCGGCATGTGCC +
Preference number: 4 (lower is better)
Translates to: KGKGELWRTSSGWRRHGTNLGSS*VSSACA
Trigger: GGCACATGCCGAAGATACTCAAGAGCTCCCAAGATT...AGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp CTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCCGGGCATCAAATCTCTaGTGGAAGGTGGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: LTSSIQISSKPKHCTMGGRASNL*WKVAVR
Trigger: ACGCACAGCCACCTTCCAGCAGAGATTTGATGCCCG...GCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp TCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTTAAATCGGGCATCTTTCTaGAAAAGCTTCTCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: SKAQPEESWRLHKTRVWLNRASF*KSFSRA
Trigger: TGCCCGGGAGAAGCTTTTGCAGAAAGATGCCCGATT...TAACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp AAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCATCTCTCTGGCATCCTaGACTTTCCCTTTGATTCGA +
Preference number: 4 (lower is better)
Translates to: KVNSGELPLGGDDTGLQAISLAS*TFPLIR
Trigger: TCGAATCAAAGGGAAAGTGCAGGATGCCAGAGAGAT...GGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCATCTCTCTGGCATCCTaGACTTTCCCTTTGATTCGA +
Preference number: 4 (lower is better)
Translates to: GSEVSSQLSAPMLGKHLAISLAS*TFPLIR
Trigger: TCGAATCAAAGGGAAAGTGCAGGATGCCAGAGAGAT...GGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp CTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCGGCACCGTGGTCTGCTaGTTGCGAGAGTTCAACATC +
Preference number: 4 (lower is better)
Translates to: LTSSIQISSKPKHCTMGGGTVVC*LREFNI
Trigger: GATGTTGAACTCTCGCAAGCAGCAGACCACGGTGCC...GCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp AACAAACAGTGCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACGCTGCCTCACTCCCCTaGTCAAAGCTTGATTTTGAA +
Preference number: 4 (lower is better)
Translates to: NKQCPLVAAGYMPPGIPDAASLP*SKLDFE
Trigger: TTCAAAATCAAGCTTTGAGCAGGGGAGTGAGGCAGC...GTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCATTGGTCATAAGCTTTaGCTTGGGGAAACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GSEVSSQLSAPMLGKHLAIGHKL*LGETEP
Trigger: TGGCTCTGTTTCCCCAAGGCAAAGCTTATGACCAAT...GGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp TGGGAGGCTGAGCCTTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAGTATCTTCGGCATGTaGCTTTTCCAGCACTTGCTA +
Preference number: 4 (lower is better)
Translates to: WEAEPFKGPTRRELAATQSIFGM*LFQHLL
Trigger: TAGCAAGTGCTGGAAAAGGCACATGCCGAAGATACT...TTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAAGGCTCAGCCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp CTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCATCTCTGCTGGAAGGTaGCTGTGCGTGTTGACTGGC +
Preference number: 4 (lower is better)
Translates to: LTSSIQISSKPKHCTMGGISAGR*LCVLTG
Trigger: GCCAGTCAACACGCACAGCCACCTTCCAGCAGAGAT...GCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp GGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAAGTTCAACATCTCTCTaGCATCCTGCACTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: GELWRTSSGWRRHGTPSQSSTSL*HPALSL
Trigger: AAGGGAAAGTGCAGGATGCCAGAGAGATGTTGAACT...TTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTAATACACACAAAGGCTTCTGGGGCACCGTaGTCTGCTGCTTGCGAGAGT +
Preference number: 4 (lower is better)
Translates to: DTRALHPLHCLKSLIHTKASGAP*SAACES
Trigger: ACTCTCGCAAGCAGCAGACCACGGTGCCCCAGAAGC...CTTTGTGTGTATTAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTTTCTGCTGTGGAACCTaGATGGTTTTGGTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLFCCGT*MVLVSF
Trigger: GAAGCTCACCAAAACCATCCAGGTTCCACAGCAGAA...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252115.10
ENST00000445215.5
CDS-3UTR CCA 90 bp GAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGAGGAGGGCCTTGGACATaGAAAGCTTGGAACTGCTTA +
Preference number: 4 (lower is better)
Translates to: ELPLGGDDTGLQAKSLDRGGPWT*KAWNCL
Trigger: TAAGCAGTTCCAAGCTTTCCATGTCCAAGGCCCTCC...TCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AAGAGCACAGGGCAGAACACAACACAGAAAGGCGGGTCCCATCCAGTGAGGAAGGTGTCCGGGACATGTTaGTCAAGGCTTTTGTTCGAA +
Preference number: 4 (lower is better)
Translates to: KSTGQNTTQKGGSHPVRKVSGTC*SRLLFE
Trigger: TTCGAACAAAAGCCTTGACCAACATGTCCCGGACAC...CTTCCTCACTGGATGGGACCCGCCTTTCTGTGTTGTGTTCTGCCCTGTGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AGGCCAGAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCATTCTGTGGGCTGCGTaGTCACAGAGGCCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: RPEMESQEQTDLFHSNKLILWAA*SQRPLR
Trigger: CCTCAGGGGCCTCTGTGACCACGCAGCCCACAGAAT...GAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAACTCTGCCCCCACTTCTaGCTGCCTCACTCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQLCPHF*LPHSPA
Trigger: AGCAGGGGAGTGAGGCAGCCAGAAGTGGGGGCAGAG...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCCTTGGTGCCTTCCAATaGGCTCAGCAGCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ARNKLTSSIQISSKPKHCLGAFQ*AQQLAA
Trigger: AGCTGCCAGCTGCTGAGCCCATTGGAAGGCACCAAG...GCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR TCA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGGTGGCTGTGCGTGTTaGCTGGCTGAGAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQGGCAC*LAEKAL
Trigger: CAAGGCCTTCTCAGCCAGTCAACACGCACAGCCACC...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp AGGCCAGAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCTTTGAGCCGGGCATCTaGGAGGCCAATCTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: RPEMESQEQTDLFHSNKLFEPGI*EANLLP
Trigger: CGGCAGAAGATTGGCCTCTCAGATGCCCGGCTCAAA...GAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTCTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp ACAACTCAAGGAAAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGAGTGGAGAAAGCCGCCTaGGGCTGCAAACTTCATCTG +
Preference number: 4 (lower is better)
Translates to: TTQGKGKGELWRTSSGWRVEKAA*GCKLHL
Trigger: CAGATGAAGTTTGCAGCCTCAGGCGGCTTTCTCCAC...TCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCTTGAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCTCTGAACCACTTTGGTaGGAGGGAGGGCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: ARNKLTSSIQISSKPKHCSEPLW*EGGPWT
Trigger: TGTCCAAGGCCCTCCCTCTCACCAAAGTGGTTCAGA...GCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp GTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGACTTCTTATATGCGGTaGTGGCATCGTCCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: VNSGELPLGGDDTGLQAKTSYMR*WHRPFS
Trigger: TGAAAAAGGACGATGCCATCACCGCATATAAGAAGT...CTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp TTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTACATTCCCATTCATGTaGAGGTTGCACTTCATCGGC +
Preference number: 4 (lower is better)
Translates to: FQRPNQKRAGGYTKPGCGTFPFM*RLHFIG
Trigger: GCCGATGAAGTGCAACCTTCACATGAATGGGAATGT...ACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp AGGCCAGAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCGGTCACAGAGGCCCCTaGGGACTTGAAGAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: RPEMESQEQTDLFHSNKLGHRGP*GLEECL
Trigger: AAGGCACTCTTCAAGTCCTCAGGGGCCTCTGTGACC...GAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTCTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTAATACACACAAAGGCGGGTCCCATCCAGTaGGGAAGCTCTTTATCCCTG +
Preference number: 4 (lower is better)
Translates to: DTRALHPLHCLKSLIHTKAGPIQ*GSSLSL
Trigger: CAGGGATAAAGAGCTTCCTCACTGGATGGGACCCGC...CTTTGTGTGTATTAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp AAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCACCTTGGCGATGAGATaGAGAAACATACTACAGGAA +
Preference number: 4 (lower is better)
Translates to: KVNSGELPLGGDDTGLQATLAMR*RNILQE
Trigger: TTCCTGTAGTATGTTTCTTCATCTCATCGCCAAGGT...GGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCCGGGGAGGCACACACTaGAAAACACAAGCCTACCTT +
Preference number: 4 (lower is better)
Translates to: LTSSIQISSKPKHCTMGGRGGTH*KTQAYL
Trigger: AAGGTAGGCTTGTGTTTTTCAGTGTGTGCCTCCCCG...GCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGAAGGAAAAGGGAAAGGTaGACTCTGGAGAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: ELPLGGDDTGLQAKSLDRRKRER*TLENFL
Trigger: GAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCT...TCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGGGACTGCCTGGGCTCTaGAGTTTCGTCCCAACTGTC +
Preference number: 4 (lower is better)
Translates to: QTDLFHSNKLQTQALHNGGLPGL*SFVPTV
Trigger: GACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCC...CCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp GCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCCGGGCATCAAATCTCTaGTGGAAGGTGGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: ARNKLTSSIQISSKPKHCRASNL*WKVAVR
Trigger: ACGCACAGCCACCTTCCAGCAGAGATTTGATGCCCG...GCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp CTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCGAGAGGCCAATCTTCTaGCGGGCATCAAATCTCTGC +
Preference number: 4 (lower is better)
Translates to: LTSSIQISSKPKHCTMGGERPIF*RASNLC
Trigger: GCAGAGATTTGATGCCCGGCAGAAGATTGGCCTCTC...GCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp AAGGAAAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGAATCGGGCATCTTTCTaGAAAAGCTTCTCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: KEKGKVNSGELPLGGDDTNRASF*KSFSRA
Trigger: TGCCCGGGAGAAGCTTTTGCAGAAAGATGCCCGATT...CGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp TCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAATCTCTCTGGCATCCTaGACTTTCCCTTTGATTCGA +
Preference number: 4 (lower is better)
Translates to: SGELPLGGDDTGLQAKSLISLAS*TFPLIR
Trigger: TCGAATCAAAGGGAAAGTGCAGGATGCCAGAGAGAT...TAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GGCTCCCGTCAGGACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTAATCTCTCTGGCATCCTaGACTTTCCCTTTGATTCGA +
Preference number: 4 (lower is better)
Translates to: GSRQDTRALHPLHCLKSLISLAS*TFPLIR
Trigger: TCGAATCAAAGGGAAAGTGCAGGATGCCAGAGAGAT...TAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTCCTGACGGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp CAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGTGGGGCACCGTGGTCTaGTGCTTGCGAGAGTTCAAC +
Preference number: 4 (lower is better)
Translates to: QTDLFHSNKLQTQALHNGWGTVV*CLREFN
Trigger: GTTGAACTCTCGCAAGCAGCAGACCACGGTGCCCCA...CCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp GAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGAGCAGGAGCTGTGTATaGATCATTCTGAACCACTTT +
Preference number: 4 (lower is better)
Translates to: ELWRTSSGWRRHGTPSQESRSCV*IILNHF
Trigger: AAAGTGGTTCAGAATGATGCATACACAGCTCCTGCT...CTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp CAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTTCAGTGACTCGAGGGTaGAGATTATTCACAGTCATC +
Preference number: 4 (lower is better)
Translates to: QAKSLDRLFPAVQPHPALSVTRG*RLFTVI
Trigger: GATGACTGTGAATAATCTGCACCCTCGAGTCACTGA...AAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAAGGCAGAGTTCACCCTaGGAGGCAGCTCGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQRQSSP*EAARSP
Trigger: AGGAGAGCGAGCTGCCTCGCAGGGTGAACTCTGCCT...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTTTGAATTCTGTGGGCTaGGTGGTCACAGAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLLNSVG*VVTEAP
Trigger: AGGGGCCTCTGTGACCACGCAGCCCACAGAATTCAA...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAACTGGTAGAGCTGCCCTaGTCCCTTGACTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQLVELP*SLDSSS
Trigger: GGAGGAGGAGTCAAGGGAGCAGGGCAGCTCTACCAG...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp TCATTCAGGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGAGTATCTTCGGCATGTaGCTTTTCCAGCACTTGCTA +
Preference number: 4 (lower is better)
Translates to: SFRDCLGSEVSSQLSAPMSIFGM*LFQHLL
Trigger: TAGCAAGTGCTGGAAAAGGCACATGCCGAAGATACT...CATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCCTGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp AAGAGCACAGGGCAGAACACAACACAGAAAGGCGGGTCCCATCCAGTGAGGAAGAGTATCTTCGGCATGTaGCTTTTCCAGCACTTGCTA +
Preference number: 4 (lower is better)
Translates to: KSTGQNTTQKGGSHPVRKSIFGM*LFQHLL
Trigger: TAGCAAGTGCTGGAAAAGGCACATGCCGAAGATACT...CTTCCTCACTGGATGGGACCCGCCTTTCTGTGTTGTGTTCTGCCCTGTGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp AACAAACAGTGCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACAGTATCTTCGGCATGTaGCTTTTCCAGCACTTGCTA +
Preference number: 4 (lower is better)
Translates to: NKQCPLVAAGYMPPGIPDSIFGM*LFQHLL
Trigger: TAGCAAGTGCTGGAAAAGGCACATGCCGAAGATACT...GTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp CTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACTCAGTATCTTCGGCATGTaGCTTTTCCAGCACTTGCTA +
Preference number: 4 (lower is better)
Translates to: LPLGGDDTGLQAKSLDRLSIFGM*LFQHLL
Trigger: TAGCAAGTGCTGGAAAAGGCACATGCCGAAGATACT...GAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GTTGCACTTCATCGGCTGCCCGTCCAGACACCGGTTGTTGTACTTCTTATATGCTCACAGTCATCTTGGTaGCTTCCAATGGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: VALHRLPVQTPVVVLLICSQSSW*LPMGSA
Trigger: TGCTGAGCCCATTGGAAGGCACCAAGATGACTGTGA...GCATATAAGAAGTACAACAACCGGTGTCTGGACGGGCAGCCGATGAAGTGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR CCA 90 bp GCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCATCTCTGCTGGAAGGTaGCTGTGCGTGTTGACTGGC +
Preference number: 4 (lower is better)
Translates to: ARNKLTSSIQISSKPKHCISAGR*LCVLTG
Trigger: GCCAGTCAACACGCACAGCCACCTTCCAGCAGAGAT...GCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp ACAACTCAAGGAAAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGAATCTCTGCTGGAAGGTaGCTGTGCGTGTTGACTGGC +
Preference number: 4 (lower is better)
Translates to: TTQGKGKGELWRTSSGWRISAGR*LCVLTG
Trigger: GCCAGTCAACACGCACAGCCACCTTCCAGCAGAGAT...TCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCTTGAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACTCAGTTCAACATCTCTCTaGCATCCTGCACTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LPLGGDDTGLQAKSLDRLSSTSL*HPALSL
Trigger: AAGGGAAAGTGCAGGATGCCAGAGAGATGTTGAACT...GAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAAGCCCAGCCATGTGGTaGAGAAAGCCGCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQSPAMW*RKPPEA
Trigger: AGCCTCAGGCGGCTTTCTCCACCACATGGCTGGGCT...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp GCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCAGAGTGCCTTCAGGATaGTGTCAGGGTCCACTTCGG +
Preference number: 4 (lower is better)
Translates to: ARNKLTSSIQISSKPKHCRVPSG*CQGPLR
Trigger: CCGAAGTGGACCCTGACACCATCCTGAAGGCACTCT...GCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTGAAGCTCTTTATCCCTaGCAACCCTTCCCACAATCA +
Preference number: 4 (lower is better)
Translates to: FQRPNQKRAGGYTKPGCGEALYP*QPFPQS
Trigger: TGATTGTGGGAAGGGTTGCCAGGGATAAAGAGCTTC...ACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCAGAACTTCCTCTGGGTaGAGACGACACGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: ARNKLTSSIQISSKPKHCRTSSG*RRHGTP
Trigger: TGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCT...GCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp ACAACTCAAGGAAAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGAAGAACTTCCTCTGGGTaGAGACGACACGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: TTQGKGKGELWRTSSGWRRTSSG*RRHGTP
Trigger: TGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCT...TCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCTTGAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTAATACACACAAAGCTGGAGAACTTCCTCTaGGTGGAGACGACACGGGAC +
Preference number: 4 (lower is better)
Translates to: DTRALHPLHCLKSLIHTKLENFL*VETTRD
Trigger: GTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAG...CTTTGTGTGTATTAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTGGTCACTCACATAAGTaGGAACAAACAGTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: FQRPNQKRAGGYTKPGCGGHSHK*EQTVPL
Trigger: AAGGGGCACTGTTTGTTCCCACTTATGTGAGTGACC...ACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AGTCGAGCTCGCTTGAGGGCCCCACACACACAGAAAAGCTCAACAATGTCCTCCAGGAAAATAATCCTCTaGTCATGGATGGATGGGGTC +
Preference number: 4 (lower is better)
Translates to: SRARLRAPHTQKSSTMSSRKIIL*SWMDGV
Trigger: GACCCCATCCATCCATGACCAGAGGATTATTTTCCT...GGAGGACATTGTTGAGCTTTTCTGTGTGTGTGGGGCCCTCAAGCGAGCTCGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR CCA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTAGGAAAATAATCCTCTaGTCATGGATGGATGGGGTC +
Preference number: 4 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLRKIIL*SWMDGV
Trigger: GACCCCATCCATCCATGACCAGAGGATTATTTTCCT...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTCATTCAGGGACTGCCTaGGCTCTGAAGTTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLHSGTA*ALKFRP
Trigger: GGGACGAAACTTCAGAGCCCAGGCAGTCCCTGAATG...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp ACAACTCAAGGAAAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACATTCAGGGACTGCCTaGGCTCTGAAGTTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: TTQGKGKGELWRTSSGWRHSGTA*ALKFRP
Trigger: GGGACGAAACTTCAGAGCCCAGGCAGTCCCTGAATG...TCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCTTGAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp ACAACTCAAGGAAAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGAGCTCTCAGGCCGACCTaGATGGTTTTGGTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: TTQGKGKGELWRTSSGWRALRPT*MVLVSF
Trigger: GAAGCTCACCAAAACCATCCAGGTCGGCCTGAGAGC...TCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCTTGAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339677.10
3UTR CAA 72 bp TTGCACTTCATCGGCTGCCCGTCCAGACACCGGTTGTaGTACTTCTTATATGCGGTGATGGCATCGTCCTTT +
Preference number: 4 (lower is better)
Translates to: LHFIGCPSRHRL*YFLYAVMASSF
Trigger: AAAGGACGATGCCATCACCGCATATAAGAAGTACAACAACCGGTGTCTGGACGGGCAGCCGATGAAGTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR TCA 90 bp GAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCTTTGAGCCGGGCATCTaGGAGGCCAATCTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: EMESQEQTDLFHSNKLQTFEPGI*EANLLP
Trigger: CGGCAGAAGATTGGCCTCTCAGATGCCCGGCTCAAA...GGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp GACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTAATACACACAAAGTCTGAACCACTTTGGTaGGAGGGAGGGCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: DTRALHPLHCLKSLIHTKSEPLW*EGGPWT
Trigger: TGTCCAAGGCCCTCCCTCTCACCAAAGTGGTTCAGA...CTTTGTGTGTATTAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp AAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCACTTCTTATATGCGGTaGTGGCATCGTCCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: KGELWRTSSGWRRHGTPSTSYMR*WHRPFS
Trigger: TGAAAAAGGACGATGCCATCACCGCATATAAGAAGT...GCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp GCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCGCTCTCCTTTTTCATTaGTGGGCTGTCACTCAGCCG +
Preference number: 4 (lower is better)
Translates to: ARNKLTSSIQISSKPKHCALLFH*WAVTQP
Trigger: CGGCTGAGTGACAGCCCATCAATGAAAAAGGAGAGC...GCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp ACAACTCAAGGAAAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGATCTGGATGGTTTTGGTaGGCTTCAGAGCAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TTQGKGKGELWRTSSGWRSGWFW*ASEQGS
Trigger: TGACCCCTGCTCTGAAGCTCACCAAAACCATCCAGA...TCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCTTGAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348657.6
ENST00000451060.6
CDS-3UTR GCA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAAGATGTCCGCCATCTTaGTCCGCCGAGCAAGCCGAA +
Preference number: 4 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQRCPPS*SAEQAE
Trigger: TTCGGCTTGCTCGGCGGAGCAAGATGGCGGACATCT...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp AGGCCAGAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCGGGCATCAAATCTCTaGTGGAAGGTGGCTGTGCGT +
Preference number: 4 (lower is better)
Translates to: RPEMESQEQTDLFHSNKLRASNL*WKVAVR
Trigger: ACGCACAGCCACCTTCCAGCAGAGATTTGATGCCCG...GAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTCTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAATGGGGCACCGTGGTCTaGTGCTTGCGAGAGTTCAAC +
Preference number: 4 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQWGTVV*CLREFN
Trigger: GTTGAACTCTCGCAAGCAGCAGACCACGGTGCCCCA...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp ACAACTCAAGGAAAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGAATGGGGATGAAGTGGTaGCATGGCTTTCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TTQGKGKGELWRTSSGWRMGMKW*HGFLLW
Trigger: CCACAGCAGAAAGCCATGGCACCACTTCATCCCCAT...TCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCTTGAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp TCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAAGCAGGAGCTGTGTATaGATCATTCTGAACCACTTT +
Preference number: 4 (lower is better)
Translates to: SGELPLGGDDTGLQAKSLSRSCV*IILNHF
Trigger: AAAGTGGTTCAGAATGATGCATACACAGCTCCTGCT...TAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp TTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTTCAGTGACTCGAGGGTaGAGATTATTCACAGTCATC +
Preference number: 4 (lower is better)
Translates to: FQRPNQKRAGGYTKPGCGSVTRG*RLFTVI
Trigger: GATGACTGTGAATAATCTGCACCCTCGAGTCACTGA...ACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp AAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCGTTGTACTTCTTATATaGGGTGATGGCATCGTCCTT +
Preference number: 4 (lower is better)
Translates to: KGKVNSGELPLGGDDTGLVVLLI*GDGIVL
Trigger: AAGGACGATGCCATCACCGCATATAAGAAGTACAAC...GAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp AAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCGTTGTACTTCTTATATaGGGTGATGGCATCGTCCTT +
Preference number: 4 (lower is better)
Translates to: KGELWRTSSGWRRHGTPSVVLLI*GDGIVL
Trigger: AAGGACGATGCCATCACCGCATATAAGAAGTACAAC...GCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp CAAGCCTACCTTGGCGATGAGATGAAGAAACATACTACAGGAAACGTTAACGTAAGGCAGAGTTCACCCTaGGAGGCAGCTCGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: QAYLGDEMKKHTTGNVNVRQSSP*EAARSP
Trigger: AGGAGAGCGAGCTGCCTCGCAGGGTGAACTCTGCCT...TACGTTAACGTTTCCTGTAGTATGTTTCTTCATCTCATCGCCAAGGTAGGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp AAGGAAAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGCTGCCTCACTCCCCTaGTCAAAGCTTGATTTTGAA +
Preference number: 4 (lower is better)
Translates to: KEKGKVNSGELPLGGDDTAASLP*SKLDFE
Trigger: TTCAAAATCAAGCTTTGAGCAGGGGAGTGAGGCAGC...CGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp CAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGTGGCAGCTGGATATATaGCTCCAGGCATCCCTGACC +
Preference number: 4 (lower is better)
Translates to: QTDLFHSNKLQTQALHNGWQLDI*LQASLT
Trigger: GGTCAGGGATGCCTGGAGGCATATATCCAGCTGCCA...CCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp CAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGTGGGAACAAACAGTaGCCCTTGGTGGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: QTDLFHSNKLQTQALHNGSGNKQ*PLVAAG
Trigger: TCCAGCTGCCACCAAGGGGCACTGTTTGTTCCCACT...CCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTTGGTCATTCAGGGACTaGCTGGGCTCTGAAGTTTCG +
Preference number: 4 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLWSFRD*LGSEVS
Trigger: CGAAACTTCAGAGCCCAGGCAGTCCCTGAATGACCA...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp GAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGAAGTTCAACATCTCTCTaGCATCCTGCACTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: ELPLGGDDTGLQAKSLDRSSTSL*HPALSL
Trigger: AAGGGAAAGTGCAGGATGCCAGAGAGATGTTGAACT...TCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CACAAAACCAGGGTGTGGTTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTCATTCTGTTTGGCCTGGTaGTTATTGACAACATTGATT +
Preference number: 4 (lower is better)
Translates to: HKTRVWLSARRGENREGSFCLAW*LLTTLI
Trigger: AATCAATGTTGTCAATAACCACCAGGCCAAACAGAA...TGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAACCACACCCTGGTTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTGAAAGAGAGCTGGGGTaGGGCATTCAGCACAACTCA +
Preference number: 4 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLERELG*GIQHNS
Trigger: TGAGTTGTGCTGAATGCCCCACCCCAGCTCTCTTTC...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp TTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTAGGAAAATAATCCTCTaGTCATGGATGGATGGGGTC +
Preference number: 4 (lower is better)
Translates to: FQRPNQKRAGGYTKPGCGRKIIL*SWMDGV
Trigger: GACCCCATCCATCCATGACCAGAGGATTATTTTCCT...ACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCCCTGCACTTTCCCTTTaGTTCGAAATCGGGCATCTT +
Preference number: 4 (lower is better)
Translates to: LTSSIQISSKPKHCTMGGPALSL*FEIGHL
Trigger: AAGATGCCCGATTTCGAATCAAAGGGAAAGTGCAGG...GCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp TTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTACCTTGGCGATGAGATaGAGAAACATACTACAGGAA +
Preference number: 4 (lower is better)
Translates to: FQRPNQKRAGGYTKPGCGTLAMR*RNILQE
Trigger: TTCCTGTAGTATGTTTCTTCATCTCATCGCCAAGGT...ACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp AGGCCAGAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCGGGGAGGCACACACTaGAAAACACAAGCCTACCTT +
Preference number: 4 (lower is better)
Translates to: RPEMESQEQTDLFHSNKLRGGTH*KTQAYL
Trigger: AAGGTAGGCTTGTGTTTTTCAGTGTGTGCCTCCCCG...GAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTCTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp AGGCCAGAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCTCTGGATGGTTTTGGTaGGCTTCAGAGCAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: RPEMESQEQTDLFHSNKLSGWFW*ASEQGS
Trigger: TGACCCCTGCTCTGAAGCTCACCAAAACCATCCAGA...GAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTCTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348657.6
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp GTTGCACTTCATCGGCTGCCCGTCCAGACACCGGTTGTTGTACTTCTTATATGCTCAGTGACTCGAGGGTaGAGATTATTCACAGTCATC +
Preference number: 4 (lower is better)
Translates to: VALHRLPVQTPVVVLLICSVTRG*RLFTVI
Trigger: GATGACTGTGAATAATCTGCACCCTCGAGTCACTGA...GCATATAAGAAGTACAACAACCGGTGTCTGGACGGGCAGCCGATGAAGTGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR GCA 90 bp TTCTGGCTGCCTCACTCCCCTGCTCAAAGCTTGATTTTGAATTCTGTGGGCTGCATTGGTCATAAGCTTTaGCTTGGGGAAACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: FWLPHSPAQSLILNSVGCIGHKL*LGETEP
Trigger: TGGCTCTGTTTCCCCAAGGCAAAGCTTATGACCAAT...GCAGCCCACAGAATTCAAAATCAAGCTTTGAGCAGGGGAGTGAGGCAGCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR GCA 90 bp AGGCCAGAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCAACTGTCTGCGCCTATaGTGGGGAAACACCTTGCCT +
Preference number: 4 (lower is better)
Translates to: RPEMESQEQTDLFHSNKLNCLRL*WGNTLP
Trigger: AGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTT...GAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTCTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp CTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCCATGGCTTTCTGCTGTaGAACCTGGATGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: LTSSIQISSKPKHCTMGGHGFLL*NLDGFG
Trigger: ACCAAAACCATCCAGGTTCCACAGCAGAAAGCCATG...GCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252115.10
ENST00000445215.5
CDS-3UTR CCA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTGATGAAGTGGTGCCATaGCTTTCTGCTGTGGAACCT +
Preference number: 4 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLDEVVP*LSAVEP
Trigger: AGGTTCCACAGCAGAAAGCCATGGCACCACTTCATC...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGTTCTGTTTGGCCTGGTaGTTATTGACAACATTGATT +
Preference number: 4 (lower is better)
Translates to: GGDDTGLQAKSLDRLFPAFCLAW*LLTTLI
Trigger: AATCAATGTTGTCAATAACCACCAGGCCAAACAGAA...CGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCTGGACATGGAAAGCTTaGAACTGCTTAGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: ARNKLTSSIQISSKPKHCWTWKA*NCLAQP
Trigger: TGGCTGGGCTAAGCAGTTCCAAGCTTTCCATGTCCA...GCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTACAAACAGTGCCCCTTaGTGGCAGCTGGATATATGC +
Preference number: 4 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLTNSAP*WQLDIC
Trigger: GCATATATCCAGCTGCCACCAAGGGGCACTGTTTGT...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp GCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCCTGGTCATGGATGGATaGGGTCACTCACATAAGTGG +
Preference number: 4 (lower is better)
Translates to: ARNKLTSSIQISSKPKHCLVMDG*GHSHKW
Trigger: CCACTTATGTGAGTGACCCCATCCATCCATGACCAG...GCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAACATTCAGGGACTGCCTaGGCTCTGAAGTTTCGTCCC +
Preference number: 4 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQHSGTA*ALKFRP
Trigger: GGGACGAAACTTCAGAGCCCAGGCAGTCCCTGAATG...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp AAGGAAAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGTCCACATGCATTCTCTaGATGGTTTTGGTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: KEKGKVNSGELPLGGDDTSTCIL*MVLVSF
Trigger: GAAGCTCACCAAAACCATCCAGAGAATGCATGTGGA...CGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451060.6
CDS-3UTR TCA 90 bp GCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCGTGTATGCATCATTCTaGACCACTTTGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: ARNKLTSSIQISSKPKHCVYASF*TTLVRG
Trigger: CCCTCTCACCAAAGTGGTTCAGAATGATGCATACAC...GCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp CAAGCCTACCTTGGCGATGAGATGAAGAAACATACTACAGGAAACGTTAACGTATGCACAATGGGAGGCTaGGCCTTTCAAAGGCCCAAC +
Preference number: 4 (lower is better)
Translates to: QAYLGDEMKKHTTGNVNVCTMGG*AFQRPN
Trigger: GTTGGGCCTTTGAAAGGCTCAGCCTCCCATTGTGCA...TACGTTAACGTTTCCTGTAGTATGTTTCTTCATCTCATCGCCAAGGTAGGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp AGGCCAGAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCAATCGGGCATCTTTCTaGAAAAGCTTCTCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: RPEMESQEQTDLFHSNKLNRASF*KSFSRA
Trigger: TGCCCGGGAGAAGCTTTTGCAGAAAGATGCCCGATT...GAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTCTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAATGGTCATTCAGGGACTaGCTGGGCTCTGAAGTTTCG +
Preference number: 4 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQWSFRD*LGSEVS
Trigger: CGAAACTTCAGAGCCCAGGCAGTCCCTGAATGACCA...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp CAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGCCCACAGGGTCCACATaGATTCTCTGGATGGTTTTG +
Preference number: 4 (lower is better)
Translates to: QTDLFHSNKLQTQALHNGPTGST*ILWMVL
Trigger: CAAAACCATCCAGAGAATGCATGTGGACCCTGTGGG...CCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451060.6
CDS-3UTR CCA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAAGGATGGGGATGAAGTaGTGCCATGGCTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQRMGMK*CHGFLL
Trigger: CAGCAGAAAGCCATGGCACCACTTCATCCCCATCCT...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGCTCCCGTCAGGACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTATTCTGTTTGGCCTGGTaGTTATTGACAACATTGATT +
Preference number: 4 (lower is better)
Translates to: GSRQDTRALHPLHCLKSLFCLAW*LLTTLI
Trigger: AATCAATGTTGTCAATAACCACCAGGCCAAACAGAA...TAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTCCTGACGGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GGCTCCCGTCAGGACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTAAAATTCTGTTTGGCCTaGTGGTTATTGACAACATTG +
Preference number: 4 (lower is better)
Translates to: GSRQDTRALHPLHCLKSLKFCLA*WLLTTL
Trigger: CAATGTTGTCAATAACCACCAGGCCAAACAGAATTT...TAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTCCTGACGGGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTAAATTCTGTTTGGCCTaGTGGTTATTGACAACATTG +
Preference number: 4 (lower is better)
Translates to: QAKSLDRLFPAVQPHPALKFCLA*WLLTTL
Trigger: CAATGTTGTCAATAACCACCAGGCCAAACAGAATTT...AAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGTGGACATGGAAAGCTTaGAACTGCTTAGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: QTDLFHSNKLQTQALHNGWTWKA*NCLAQP
Trigger: TGGCTGGGCTAAGCAGTTCCAAGCTTTCCATGTCCA...CCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp GAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCGCAGCAGGATGGGCTaGTCTGAGGTGATAACATTC +
Preference number: 4 (lower is better)
Translates to: EMESQEQTDLFHSNKLQTRSRMG*SEVITF
Trigger: GAATGTTATCACCTCAGACCAGCCCATCCTGCTGCG...GGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp CAAGCCTACCTTGGCGATGAGATGAAGAAACATACTACAGGAAACGTTAACGTAAGAGTGCCTTCAGGATaGTGTCAGGGTCCACTTCGG +
Preference number: 4 (lower is better)
Translates to: QAYLGDEMKKHTTGNVNVRVPSG*CQGPLR
Trigger: CCGAAGTGGACCCTGACACCATCCTGAAGGCACTCT...TACGTTAACGTTTCCTGTAGTATGTTTCTTCATCTCATCGCCAAGGTAGGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAACACAAAACCAGGGTGTaGTTAAGTGCCAGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQHKTRV*LSARRG
Trigger: ACCTCGCCTGGCACTTAACCACACCCTGGTTTTGTG...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAAACAGTGCCCCTTGGTaGCAGCTGGATATATGCCTC +
Preference number: 4 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQNSAPW*QLDICL
Trigger: GAGGCATATATCCAGCTGCCACCAAGGGGCACTGTT...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTATAATCCTCTGGTCATaGATGGATGGGGTCACTCAC +
Preference number: 4 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLIILWS*MDGVTH
Trigger: GTGAGTGACCCCATCCATCCATGACCAGAGGATTAT...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR TCA 90 bp CAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGCCTGCACTTTCCCTTTaGTTCGAAATCGGGCATCTT +
Preference number: 4 (lower is better)
Translates to: QTDLFHSNKLQTQALHNGPALSL*FEIGHL
Trigger: AAGATGCCCGATTTCGAATCAAAGGGAAAGTGCAGG...CCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp ACAACTCAAGGAAAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGAATCTCTCTGGCATCCTaGACTTTCCCTTTGATTCGA +
Preference number: 4 (lower is better)
Translates to: TTQGKGKGELWRTSSGWRISLAS*TFPLIR
Trigger: TCGAATCAAAGGGAAAGTGCAGGATGCCAGAGAGAT...TCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCTTGAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAATGGAAAGCTTGGAACTaGTTAGCCCAGCCATGTGGT +
Preference number: 4 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQWKAWN*LAQPCG
Trigger: ACCACATGGCTGGGCTAAGCAGTTCCAAGCTTTCCA...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp CTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCAGCAGGAGCTGTGTATaGATCATTCTGAACCACTTT +
Preference number: 4 (lower is better)
Translates to: LTSSIQISSKPKHCTMGGSRSCV*IILNHF
Trigger: AAAGTGGTTCAGAATGATGCATACACAGCTCCTGCT...GCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp CAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGGCTGCCTCACTCCCCTaGTCAAAGCTTGATTTTGAA +
Preference number: 4 (lower is better)
Translates to: QTDLFHSNKLQTQALHNGAASLP*SKLDFE
Trigger: TTCAAAATCAAGCTTTGAGCAGGGGAGTGAGGCAGC...CCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp CAAGCCTACCTTGGCGATGAGATGAAGAAACATACTACAGGAAACGTTAACGTAAACTGTCTGCGCCTATaGTGGGGAAACACCTTGCCT +
Preference number: 4 (lower is better)
Translates to: QAYLGDEMKKHTTGNVNVNCLRL*WGNTLP
Trigger: AGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTT...TACGTTAACGTTTCCTGTAGTATGTTTCTTCATCTCATCGCCAAGGTAGGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp GACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTAATACACACAAAGTTCTGCTGTGGAACCTaGATGGTTTTGGTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: DTRALHPLHCLKSLIHTKFCCGT*MVLVSF
Trigger: GAAGCTCACCAAAACCATCCAGGTTCCACAGCAGAA...CTTTGTGTGTATTAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252115.10
ENST00000445215.5
CDS-3UTR CCA 90 bp GACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTAATACACACAAAGCATGGCTTTCTGCTGTaGAACCTGGATGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: DTRALHPLHCLKSLIHTKHGFLL*NLDGFG
Trigger: ACCAAAACCATCCAGGTTCCACAGCAGAAAGCCATG...CTTTGTGTGTATTAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252115.10
ENST00000445215.5
CDS-3UTR CCA 90 bp GAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCGGAGGGCCTTGGACATaGAAAGCTTGGAACTGCTTA +
Preference number: 4 (lower is better)
Translates to: EMESQEQTDLFHSNKLQTGGPWT*KAWNCL
Trigger: TAAGCAGTTCCAAGCTTTCCATGTCCAAGGCCCTCC...GGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CCA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTTATTCACAGTCATCTTaGTGCCTTCCAATGGGCTCA +
Preference number: 4 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLYSQSS*CLPMGS
Trigger: TGAGCCCATTGGAAGGCACCAAGATGACTGTGAATA...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR TCA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTACCTTGGCGATGAGATaGAGAAACATACTACAGGAA +
Preference number: 4 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLTLAMR*RNILQE
Trigger: TTCCTGTAGTATGTTTCTTCATCTCATCGCCAAGGT...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGCCTACCTTGGCGATaGGATGAAGAAACATACTAC +
Preference number: 4 (lower is better)
Translates to: QTDLFHSNKLQTQALHNGSLPWR*DEETYY
Trigger: GTAGTATGTTTCTTCATCTCATCGCCAAGGTAGGCT...CCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp CAAGCCTACCTTGGCGATGAGATGAAGAAACATACTACAGGAAACGTTAACGTAAATCGGGCATCTTTCTaGAAAAGCTTCTCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: QAYLGDEMKKHTTGNVNVNRASF*KSFSRA
Trigger: TGCCCGGGAGAAGCTTTTGCAGAAAGATGCCCGATT...TACGTTAACGTTTCCTGTAGTATGTTTCTTCATCTCATCGCCAAGGTAGGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp GCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCAGCAGGAGCTGTGTATaGATCATTCTGAACCACTTT +
Preference number: 4 (lower is better)
Translates to: ARNKLTSSIQISSKPKHCSRSCV*IILNHF
Trigger: AAAGTGGTTCAGAATGATGCATACACAGCTCCTGCT...GCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp CAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGATTGGTCATAAGCTTTaGCTTGGGGAAACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: QTDLFHSNKLQTQALHNGIGHKL*LGETEP
Trigger: TGGCTCTGTTTCCCCAAGGCAAAGCTTATGACCAAT...CCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AAGGAAAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGAAATTCTGTTTGGCCTaGTGGTTATTGACAACATTG +
Preference number: 4 (lower is better)
Translates to: KEKGKVNSGELPLGGDDTKFCLA*WLLTTL
Trigger: CAATGTTGTCAATAACCACCAGGCCAAACAGAATTT...CGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp CAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGACTTCTTATATGCGGTaGTGGCATCGTCCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: QTDLFHSNKLQTQALHNGTSYMR*WHRPFS
Trigger: TGAAAAAGGACGATGCCATCACCGCATATAAGAAGT...CCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR TCA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAAGCCTACCTTGGCGATaGGATGAAGAAACATACTAC +
Preference number: 4 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQSLPWR*DEETYY
Trigger: GTAGTATGTTTCTTCATCTCATCGCCAAGGTAGGCT...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR GCA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAATCTCTCTGGCATCCTaGACTTTCCCTTTGATTCGA +
Preference number: 4 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQISLAS*TFPLIR
Trigger: TCGAATCAAAGGGAAAGTGCAGGATGCCAGAGAGAT...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR GCA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAATTGGTCATAAGCTTTaGCTTGGGGAAACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQIGHKL*LGETEP
Trigger: TGGCTCTGTTTCCCCAAGGCAAAGCTTATGACCAAT...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CCA 90 bp AGGCCAGAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCAGGTCATATAAATTCTaGATGGTTTTGGTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RPEMESQEQTDLFHSNKLRSYKF*MVLVSF
Trigger: GAAGCTCACCAAAACCATCCAGAATTTATATGACCT...GAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTCTGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348657.6
ENST00000617178.4
CDS-3UTR CCA 90 bp GAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCAGGTCATATAAATTCTaGATGGTTTTGGTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: EMESQEQTDLFHSNKLQTRSYKF*MVLVSF
Trigger: GAAGCTCACCAAAACCATCCAGAATTTATATGACCT...GGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348657.6
ENST00000617178.4
CDS-3UTR CAA 90 bp GAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGACACCCAGAAGGGAGAGATGTCCGCCATCTaGCTCCGCCGAGCAAGCCGA +
Preference number: 5 (lower is better)
Translates to: EPGGLTTQPPPSKDTQKGEMSAI*LRRASR
Trigger: TCGGCTTGCTCGGCGGAGCAAGATGGCGGACATCTC...TCCCTTCTGGGTGTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
CDS-3UTR CAA 90 bp GGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGACACAGCCTCATCCTGCCCTaGCCACTAGTGAGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: GEVRTGRAHNTAPSQQRHSLILP*PLVRPG
Trigger: TCCAGGCCTCACTAGTGGCAAGGGCAGGATGAGGCT...GTGTCTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp TTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCATTCTCCCGGGCATCCTaGACTCCCAGTTTGAGCCGG +
Preference number: 5 (lower is better)
Translates to: LSARRGENREGSQHSPLPFSRAS*TPSLSR
Trigger: CCGGCTCAAACTGGGAGTCAAGGATGCCCGGGAGAA...TGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp GGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAACCAGTCGAGCTCGCTaGAGGGCCCCACACACACAG +
Preference number: 5 (lower is better)
Translates to: GTAWALKFRPNCLRLCWGTSRAR*RAPHTQ
Trigger: CTGTGTGTGTGGGGCCCTCAAGCGAGCTCGACTGGT...TCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp GCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGCAAAGCAGTCCGATGGCCCATaGGTCATAAGCTTTGCCTTG +
Preference number: 5 (lower is better)
Translates to: ARRGENREGSQHSPLPAKQSDGP*VISFAL
Trigger: CAAGGCAAAGCTTATGACCAATGGGCCATCGGACTG...CTTTGCTGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp CCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCTGCGAGGCCCCTGAGGACTaGAAGAGTGCCTTCAGGATG +
Preference number: 5 (lower is better)
Translates to: PTVCAYAGETPCLVELPCEAPED*KSAFRM
Trigger: CATCCTGAAGGCACTCTTCAAGTCCTCAGGGGCCTC...GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS GCA 90 bp AGCCGGGCATCTGAGAGGCCAATCTTCTGCCGGGCATCAAATCTCTaGTGGAAGGTGGCTGTGCGTGTTGACTGGCTGAGAAGGCCTTGC +
Preference number: 5 (lower is better)
Translates to: SRASERPIFCRASNL*WKVAVRVDWLRRPC
Trigger: GCAAGGCCTTCTCAGCCAGTCAACACGCACAGCCACCTTCCAGCAGAGATTTGATGCCCGGCAGAAGATTGGCCTCTCAGATGCCCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000454057.1
ENST00000463133.1
ENST00000617178.4
CDS CCA 90 bp CGGGCATCTGAGAGGCCAATCTTCTGCCGGGCATCAAATCTCTGCTaGAAGGTGGCTGTGCGTGTTGACTGGCTGAGAAGGCCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: RASERPIFCRASNLC*KVAVRVDWLRRPCW
Trigger: CCAGCAAGGCCTTCTCAGCCAGTCAACACGCACAGCCACCTTCCAGCAGAGATTTGATGCCCGGCAGAAGATTGGCCTCTCAGATGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000454057.1
ENST00000463133.1
ENST00000617178.4
CDS-3UTR CAA 90 bp TGGGAGGCTGAGCCTTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAATTCTCCCGGGCATCCTaGACTCCCAGTTTGAGCCGG +
Preference number: 5 (lower is better)
Translates to: WEAEPFKGPTRRELAATQFSRAS*TPSLSR
Trigger: CCGGCTCAAACTGGGAGTCAAGGATGCCCGGGAGAA...TTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAAGGCTCAGCCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CAA 90 bp CTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCTTCTCCCGGGCATCCTaGACTCCCAGTTTGAGCCGG +
Preference number: 5 (lower is better)
Translates to: LQAKSLDRLFPAVQPHPAFSRAS*TPSLSR
Trigger: CCGGCTCAAACTGGGAGTCAAGGATGCCCGGGAGAA...GGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp CGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCGGAACCTGGATGGTTTaGGTGAGCTTCAGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: RPNCLRLCWGNTLPGRAAGTWMV*VSFRAG
Trigger: CCCTGCTCTGAAGCTCACCAAAACCATCCAGGTTCC...GGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252115.10
ENST00000445215.5
CDS-3UTR CAA 90 bp CTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACTCACCAGTCGAGCTCGCTaGAGGGCCCCACACACACAG +
Preference number: 5 (lower is better)
Translates to: LPLGGDDTGLQAKSLDRLTSRAR*RAPHTQ
Trigger: CTGTGTGTGTGGGGCCCTCAAGCGAGCTCGACTGGT...GAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp TCATTCAGGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGACCAGTCGAGCTCGCTaGAGGGCCCCACACACACAG +
Preference number: 5 (lower is better)
Translates to: SFRDCLGSEVSSQLSAPMTSRAR*RAPHTQ
Trigger: CTGTGTGTGTGGGGCCCTCAAGCGAGCTCGACTGGT...CATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCCTGAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp TTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAGTCATAAGCTTTGCCTaGGGGAAACAGAGCCACCCT +
Preference number: 5 (lower is better)
Translates to: LSARRGENREGSQHSPLPVISFA*GKQSHP
Trigger: AGGGTGGCTCTGTTTCCCCAAGGCAAAGCTTATGAC...TGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp GAGGAAGCTCTTTATCCCTGGCAACCCTTCCCACAATCAGGGGTCTCCAGTCCGAGCCTCATCCTGCCCTaGCCACTAGTGAGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: EEALYPWQPFPQSGVSSPSLILP*PLVRPG
Trigger: TCCAGGCCTCACTAGTGGCAAGGGCAGGATGAGGCT...CGGACTGGAGACCCCTGATTGTGGGAAGGGTTGCCAGGGATAAAGAGCTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp GGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAATGCTGGGGAAACACCTaGCCTGGTAGAGCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: GELWRTSSGWRRHGTPSQCWGNT*PGRAAL
Trigger: CAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCA...TTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp TGGGAGGCTGAGCCTTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAATGCTGGGGAAACACCTaGCCTGGTAGAGCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: WEAEPFKGPTRRELAATQCWGNT*PGRAAL
Trigger: CAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCA...TTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAAGGCTCAGCCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS TCA 90 bp CTTCTGCCGGGCATCAAATCTCTGCTGGAAGGTGGCTGTGCGTGTTaGCTGGCTGAGAAGGCCTTGCTGGATCCCAACTCGAGATCGGAC +
Preference number: 5 (lower is better)
Translates to: LLPGIKSLLEGGCAC*LAEKALLDPNSRSD
Trigger: GTCCGATCTCGAGTTGGGATCCAGCAAGGCCTTCTCAGCCAGTCAACACGCACAGCCACCTTCCAGCAGAGATTTGATGCCCGGCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000454057.1
ENST00000463133.1
ENST00000617178.4
CDS CCA 90 bp AAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTaGTTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTTTTGTTCG +
Preference number: 5 (lower is better)
Translates to: KAQPEESWRLHKTRV*LSARRGENREGFCS
Trigger: CGAACAAAAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000617178.4
CDS-3UTR CAA 90 bp AAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTGAGATGTCCGCCATCTaGCTCCGCCGAGCAAGCCGA +
Preference number: 5 (lower is better)
Translates to: KGKGELWRTSSGWRRHGTEMSAI*LRRASR
Trigger: TCGGCTTGCTCGGCGGAGCAAGATGGCGGACATCTC...AGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
CDS-3UTR CAA 90 bp ACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATTTCTCCCGGGCATCCTaGACTCCCAGTTTGAGCCGG +
Preference number: 5 (lower is better)
Translates to: TGLQAKSLDRLFPAVQPHFSRAS*TPSLSR
Trigger: CCGGCTCAAACTGGGAGTCAAGGATGCCCGGGAGAA...ATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp AACAAACAGTGCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACTTCTCCCGGGCATCCTaGACTCCCAGTTTGAGCCGG +
Preference number: 5 (lower is better)
Translates to: NKQCPLVAAGYMPPGIPDFSRAS*TPSLSR
Trigger: CCGGCTCAAACTGGGAGTCAAGGATGCCCGGGAGAA...GTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CAA 90 bp GGCTGCGTGGTCACAGAGGCCCCTGAGGACTTGAAGAGTGCCTTCAGGATGGTGACCGTGGTCTGCTGCTaGCGAGAGTTCAACATCTCT +
Preference number: 5 (lower is better)
Translates to: GCVVTEAPEDLKSAFRMVTVVCC*REFNIS
Trigger: AGAGATGTTGAACTCTCGCAAGCAGCAGACCACGGT...CACCATCCTGAAGGCACTCTTCAAGTCCTCAGGGGCCTCTGTGACCACGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR CAA 90 bp TTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCACTAGTGAGGCCTGGAGCCACTCCCCTGCTCAAAGCTaGATTTTGAATTCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: FPAVQPHPALATSEAWSHSPAQS*ILNSVG
Trigger: GCCCACAGAATTCAAAATCAAGCTTTGAGCAGGGGA...GTGGCTCCAGGCCTCACTAGTGGCAAGGGCAGGATGAGGCTGCACCGCTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp GGCTCCCGTCAGGACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTAAGCCTCATCCTGCCCTaGCCACTAGTGAGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: GSRQDTRALHPLHCLKSLSLILP*PLVRPG
Trigger: TCCAGGCCTCACTAGTGGCAAGGGCAGGATGAGGCT...TAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTCCTGACGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp AACAAACAGTGCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACTGCTGGGGAAACACCTaGCCTGGTAGAGCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: NKQCPLVAAGYMPPGIPDCWGNT*PGRAAL
Trigger: CAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCA...GTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CAA 90 bp TCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTATGCTGGGGAAACACCTaGCCTGGTAGAGCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: SGELPLGGDDTGLQAKSLCWGNT*PGRAAL
Trigger: CAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCA...TAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp TTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCACTAGTGAGGCCTGGAGCCACAAATTCTGGATGGTTTaGGTGAGCTTCAGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: FPAVQPHPALATSEAWSHKFWMV*VSFRAG
Trigger: CCCTGCTCTGAAGCTCACCAAAACCATCCAGAATTT...GTGGCTCCAGGCCTCACTAGTGGCAAGGGCAGGATGAGGCTGCACCGCTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348657.6
CDS TCA 90 bp GGGCATCAAATCTCTGCTGGAAGGTGGCTGTGCGTGTTGACTGGCTaGGAAGGCCTTGCTGGATCCCAACTCGAGATCGGACACCTCCAA +
Preference number: 5 (lower is better)
Translates to: GHQISAGRWLCVLTG*EGLAGSQLEIGHLQ
Trigger: TTGGAGGTGTCCGATCTCGAGTTGGGATCCAGCAAGGCCTTCTCAGCCAGTCAACACGCACAGCCACCTTCCAGCAGAGATTTGATGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000454057.1
ENST00000463133.1
ENST00000617178.4
CDS TCA 90 bp AAGCTTCTCCCGGGCATCCTTGACTCCCAGTTTGAGCCGGGCATCTaGGAGGCCAATCTTCTGCCGGGCATCAAATCTCTGCTGGAAGGT +
Preference number: 5 (lower is better)
Translates to: KLLPGILDSQFEPGI*EANLLPGIKSLLEG
Trigger: ACCTTCCAGCAGAGATTTGATGCCCGGCAGAAGATTGGCCTCTCAGATGCCCGGCTCAAACTGGGAGTCAAGGATGCCCGGGAGAAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000454057.1
ENST00000463133.1
ENST00000617178.4
CDS GCA 90 bp TCCTTGACTCCCAGTTTGAGCCGGGCATCTGAGAGGCCAATCTTCTaGCGGGCATCAAATCTCTGCTGGAAGGTGGCTGTGCGTGTTGAC +
Preference number: 5 (lower is better)
Translates to: SLTPSLSRASERPIF*RASNLCWKVAVRVD
Trigger: GTCAACACGCACAGCCACCTTCCAGCAGAGATTTGATGCCCGGCAGAAGATTGGCCTCTCAGATGCCCGGCTCAAACTGGGAGTCAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000454057.1
ENST00000463133.1
ENST00000617178.4
CDS-3UTR CAA 90 bp GGCTCCCGTCAGGACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTATCCTTGACTCCCAGTTaGAGCCGGGCATCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: GSRQDTRALHPLHCLKSLSLTPS*SRASER
Trigger: CCTCTCAGATGCCCGGCTCAAACTGGGAGTCAAGGA...TAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTCCTGACGGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp TTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCATCCTGCACTTTCCCTTaGATTCGAAATCGGGCATCT +
Preference number: 5 (lower is better)
Translates to: LSARRGENREGSQHSPLPSCTFP*IRNRAS
Trigger: AGATGCCCGATTTCGAATCAAAGGGAAAGTGCAGGA...TGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp TTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCATTATTCACAGTCATCTaGGTGCCTTCCAATGGGCTG +
Preference number: 5 (lower is better)
Translates to: LSARRGENREGSQHSPLPLFTVI*VPSNGL
Trigger: CAGCCCATTGGAAGGCACCAAGATGACTGTGAATAA...TGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
CDS-3UTR CAA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGAGGCCCCTGAGGACTaGAAGAGTGCCTTCAGGATG +
Preference number: 5 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLEAPED*KSAFRM
Trigger: CATCCTGAAGGCACTCTTCAAGTCCTCAGGGGCCTC...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp CCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCTGCAACAAACAGTGCCCCTaGGTGGCAGCTGGATATATG +
Preference number: 5 (lower is better)
Translates to: PTVCAYAGETPCLVELPCNKQCP*VAAGYM
Trigger: CATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT...GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CAA 90 bp CAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTCCGACCTGGATGGTTTaGGTGAGCTTCAGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: QAKSLDRLFPAVQPHPALPTWMV*VSFRAG
Trigger: CCCTGCTCTGAAGCTCACCAAAACCATCCAGGTCGG...AAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339677.10
CDS-3UTR CAA 90 bp CCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCTGCTTATTCACAGTCATCTaGGTGCCTTCCAATGGGCTG +
Preference number: 5 (lower is better)
Translates to: PTVCAYAGETPCLVELPCLFTVI*VPSNGL
Trigger: CAGCCCATTGGAAGGCACCAAGATGACTGTGAATAA...GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
CDS-3UTR CAA 90 bp GGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGATCCAGACACCGGTTGTaGTACTTCTTATATGCGGTG +
Preference number: 5 (lower is better)
Translates to: GTAWALKFRPNCLRLCWGSRHRL*YFLYAV
Trigger: CACCGCATATAAGAAGTACAACAACCGGTGTCTGGA...TCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp CGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCTCCAGACACCGGTTGTaGTACTTCTTATATGCGGTG +
Preference number: 5 (lower is better)
Translates to: RPNCLRLCWGNTLPGRAASRHRL*YFLYAV
Trigger: CACCGCATATAAGAAGTACAACAACCGGTGTCTGGA...GGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp TCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTTAGAGGCCCCTGAGGACTaGAAGAGTGCCTTCAGGATG +
Preference number: 5 (lower is better)
Translates to: SKAQPEESWRLHKTRVWLEAPED*KSAFRM
Trigger: CATCCTGAAGGCACTCTTCAAGTCCTCAGGGGCCTC...TAACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp CCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCTGCGCTCAAAGCTTGATTTaGAATTCTGTGGGCTGCGTG +
Preference number: 5 (lower is better)
Translates to: PTVCAYAGETPCLVELPCAQSLI*NSVGCV
Trigger: CACGCAGCCCACAGAATTCAAAATCAAGCTTTGAGC...GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp TTAAGTGCCAGGCGAGGTGAGAACCGGGAGGGCTCACAACACAGCCCCCTCCCAAGCCTCAAGCAAATCTaGGGAGCTCTTGAGTATCTT +
Preference number: 5 (lower is better)
Translates to: LSARRGENREGSQHSPLPSLKQI*GALEYL
Trigger: AAGATACTCAAGAGCTCCCAAGATTTGCTTGAGGCT...TGGGAGGGGGCTGTGTTGTGAGCCCTCCCGGTTCTCACCTCGCCTGGCACTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp GCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACCACTGTCCTGAAATTCTGGATGGTTTaGGTGAGCTTCAGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: APWWQLDICLQASLTTVLKFWMV*VSFRAG
Trigger: CCCTGCTCTGAAGCTCACCAAAACCATCCAGAATTT...CAGGACAGTGGTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348657.6
ENST00000617178.4
CDS-3UTR CAA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTGAGATGTCCGCCATCTaGCTCCGCCGAGCAAGCCGA +
Preference number: 5 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLEMSAI*LRRASR
Trigger: TCGGCTTGCTCGGCGGAGCAAGATGGCGGACATCTC...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CAA 90 bp TCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAACCGTGGTCTGCTGCTaGCGAGAGTTCAACATCTCT +
Preference number: 5 (lower is better)
Translates to: SGELPLGGDDTGLQAKSLTVVCC*REFNIS
Trigger: AGAGATGTTGAACTCTCGCAAGCAGCAGACCACGGT...TAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp ACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATACCGTGGTCTGCTGCTaGCGAGAGTTCAACATCTCT +
Preference number: 5 (lower is better)
Translates to: TGLQAKSLDRLFPAVQPHTVVCC*REFNIS
Trigger: AGAGATGTTGAACTCTCGCAAGCAGCAGACCACGGT...ATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp AAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCACCGTGGTCTGCTGCTaGCGAGAGTTCAACATCTCT +
Preference number: 5 (lower is better)
Translates to: KGELWRTSSGWRRHGTPSTVVCC*REFNIS
Trigger: AGAGATGTTGAACTCTCGCAAGCAGCAGACCACGGT...GCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp CTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACTCGTCATAAGCTTTGCCTaGGGGAAACAGAGCCACCCT +
Preference number: 5 (lower is better)
Translates to: LPLGGDDTGLQAKSLDRLVISFA*GKQSHP
Trigger: AGGGTGGCTCTGTTTCCCCAAGGCAAAGCTTATGAC...GAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp AAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCGTCATAAGCTTTGCCTaGGGGAAACAGAGCCACCCT +
Preference number: 5 (lower is better)
Translates to: KGKVNSGELPLGGDDTGLVISFA*GKQSHP
Trigger: AGGGTGGCTCTGTTTCCCCAAGGCAAAGCTTATGAC...GAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp TTCCCAGCGGTGCAGCCTCATCCTGCCCTTGCCACTAGTGAGGCCTGGAGCCACCATCCCCTCCATTGTTaGAAAAGCTTAATACACACA +
Preference number: 5 (lower is better)
Translates to: FPAVQPHPALATSEAWSHHPLHC*KSLIHT
Trigger: TGTGTGTATTAAGCTTTTCAAACAATGGAGGGGATG...GTGGCTCCAGGCCTCACTAGTGGCAAGGGCAGGATGAGGCTGCACCGCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp GGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCAACAAACAGTGCCCCTaGGTGGCAGCTGGATATATG +
Preference number: 5 (lower is better)
Translates to: GSEVSSQLSAPMLGKHLANKQCP*VAAGYM
Trigger: CATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT...GGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CAA 90 bp GGCTGCGTGGTCACAGAGGCCCCTGAGGACTTGAAGAGTGCCTTCAGGATGGTGAGCCTCAAGCAAATCTaGGGAGCTCTTGAGTATCTT +
Preference number: 5 (lower is better)
Translates to: GCVVTEAPEDLKSAFRMVSLKQI*GALEYL
Trigger: AAGATACTCAAGAGCTCCCAAGATTTGCTTGAGGCT...CACCATCCTGAAGGCACTCTTCAAGTCCTCAGGGGCCTCTGTGACCACGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR CAA 90 bp CCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCTGGTAGAGCTGCCCTGCAGCCTCAAGCAAATCTaGGGAGCTCTTGAGTATCTT +
Preference number: 5 (lower is better)
Translates to: PTVCAYAGETPCLVELPCSLKQI*GALEYL
Trigger: AAGATACTCAAGAGCTCCCAAGATTTGCTTGAGGCT...GCAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS GCA 90 bp CTGGCATCCTGCACTTTCCCTTTGATTCGAAATCGGGCATCTTTCTaGAAAAGCTTCTCCCGGGCATCCTTGACTCCCAGTTTGAGCCGG +
Preference number: 5 (lower is better)
Translates to: LASCTFPLIRNRASF*KSFSRASLTPSLSR
Trigger: CCGGCTCAAACTGGGAGTCAAGGATGCCCGGGAGAAGCTTTTGCAGAAAGATGCCCGATTTCGAATCAAAGGGAAAGTGCAGGATGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000454057.1
ENST00000463133.1
ENST00000617178.4
CDS-3UTR CAA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTAGTGTCCGGGACATGTaGGTCAAGGCTTTTGTTCGA +
Preference number: 5 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLSVRDM*VKAFVR
Trigger: TCGAACAAAAGCCTTGACCAACATGTCCCGGACACT...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp AAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCAGTGTCCGGGACATGTaGGTCAAGGCTTTTGTTCGA +
Preference number: 5 (lower is better)
Translates to: KGELWRTSSGWRRHGTPSSVRDM*VKAFVR
Trigger: TCGAACAAAAGCCTTGACCAACATGTCCCGGACACT...GCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp CAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTCCGTCCAGACACCGGTaGTTGTACTTCTTATATGCG +
Preference number: 5 (lower is better)
Translates to: QAKSLDRLFPAVQPHPALPSRHR*LYFLYA
Trigger: CGCATATAAGAAGTACAACAACCGGTGTCTGGACGG...AAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp AACAAACAGTGCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACCCGTCCAGACACCGGTaGTTGTACTTCTTATATGCG +
Preference number: 5 (lower is better)
Translates to: NKQCPLVAAGYMPPGIPDPSRHR*LYFLYA
Trigger: CGCATATAAGAAGTACAACAACCGGTGTCTGGACGG...GTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp GAGGAAGCTCTTTATCCCTGGCAACCCTTCCCACAATCAGGGGTCTCCAGTCCGGCTCAAAGCTTGATTTaGAATTCTGTGGGCTGCGTG +
Preference number: 5 (lower is better)
Translates to: EEALYPWQPFPQSGVSSPAQSLI*NSVGCV
Trigger: CACGCAGCCCACAGAATTCAAAATCAAGCTTTGAGC...CGGACTGGAGACCCCTGATTGTGGGAAGGGTTGCCAGGGATAAAGAGCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp GGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTGCCGCTCAAAGCTTGATTTaGAATTCTGTGGGCTGCGTG +
Preference number: 5 (lower is better)
Translates to: GSEVSSQLSAPMLGKHLAAQSLI*NSVGCV
Trigger: CACGCAGCCCACAGAATTCAAAATCAAGCTTTGAGC...GGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp GTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGTCCCCTGCTCAAAGCTaGATTTTGAATTCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: VNSGELPLGGDDTGLQAKSPAQS*ILNSVG
Trigger: GCCCACAGAATTCAAAATCAAGCTTTGAGCAGGGGA...CTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp TCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTTACAGTCCGATGGCCCATaGGTCATAAGCTTTGCCTTG +
Preference number: 5 (lower is better)
Translates to: SKAQPEESWRLHKTRVWLQSDGP*VISFAL
Trigger: CAAGGCAAAGCTTATGACCAATGGGCCATCGGACTG...TAACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp GCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCAGCCTCATCCTGCCCTaGCCACTAGTGAGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: ARNKLTSSIQISSKPKHCSLILP*PLVRPG
Trigger: TCCAGGCCTCACTAGTGGCAAGGGCAGGATGAGGCT...GCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp AAGAGCACAGGGCAGAACACAACACAGAAAGGCGGGTCCCATCCAGTGAGGAAGAACAAACAGTGCCCCTaGGTGGCAGCTGGATATATG +
Preference number: 5 (lower is better)
Translates to: KSTGQNTTQKGGSHPVRKNKQCP*VAAGYM
Trigger: CATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT...CTTCCTCACTGGATGGGACCCGCCTTTCTGTGTTGTGTTCTGCCCTGTGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp AAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCAACAAACAGTGCCCCTaGGTGGCAGCTGGATATATG +
Preference number: 5 (lower is better)
Translates to: KGELWRTSSGWRRHGTPSNKQCP*VAAGYM
Trigger: CATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT...GCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTAACAAACAGTGCCCCTaGGTGGCAGCTGGATATATG +
Preference number: 5 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLNKQCP*VAAGYM
Trigger: CATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CAA 90 bp TCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAATTCTCTGGATGGTTTaGGTGAGCTTCAGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: SGELPLGGDDTGLQAKSLILWMV*VSFRAG
Trigger: CCCTGCTCTGAAGCTCACCAAAACCATCCAGAGAAT...TAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451060.6
CDS TCA 90 bp AAGGGAGAGCAGGAGCTGTGTATGCATCATTCTGAACCACTTTGGTaGGAGGGAGGGCCTTGGACATGGAAAGCTTGGAACTGCTTAGCC +
Preference number: 5 (lower is better)
Translates to: KGEQELCMHHSEPLW*EGGPWTWKAWNCLA
Trigger: GGCTAAGCAGTTCCAAGCTTTCCATGTCCAAGGCCCTCCCTCTCACCAAAGTGGTTCAGAATGATGCATACACAGCTCCTGCTCTCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000491021.1
ENST00000617178.4
CDS-3UTR CAA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGAGATGTCCGCCATCTaGCTCCGCCGAGCAAGCCGA +
Preference number: 5 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQEMSAI*LRRASR
Trigger: TCGGCTTGCTCGGCGGAGCAAGATGGCGGACATCTC...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CAA 90 bp CAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTTCCTGCACTTTCCCTTaGATTCGAAATCGGGCATCT +
Preference number: 5 (lower is better)
Translates to: QAKSLDRLFPAVQPHPALSCTFP*IRNRAS
Trigger: AGATGCCCGATTTCGAATCAAAGGGAAAGTGCAGGA...AAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp ACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATTCCTGCACTTTCCCTTaGATTCGAAATCGGGCATCT +
Preference number: 5 (lower is better)
Translates to: TGLQAKSLDRLFPAVQPHSCTFP*IRNRAS
Trigger: AGATGCCCGATTTCGAATCAAAGGGAAAGTGCAGGA...ATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp TCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTATCCTGCACTTTCCCTTaGATTCGAAATCGGGCATCT +
Preference number: 5 (lower is better)
Translates to: SGELPLGGDDTGLQAKSLSCTFP*IRNRAS
Trigger: AGATGCCCGATTTCGAATCAAAGGGAAAGTGCAGGA...TAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp CAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTTTATTCACAGTCATCTaGGTGCCTTCCAATGGGCTG +
Preference number: 5 (lower is better)
Translates to: QAKSLDRLFPAVQPHPALLFTVI*VPSNGL
Trigger: CAGCCCATTGGAAGGCACCAAGATGACTGTGAATAA...AAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
CDS-3UTR CAA 90 bp TTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTCCGTCCAGACACCGGTaGTTGTACTTCTTATATGCG +
Preference number: 5 (lower is better)
Translates to: FQRPNQKRAGGYTKPGCGPSRHR*LYFLYA
Trigger: CGCATATAAGAAGTACAACAACCGGTGTCTGGACGG...ACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp CAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTTCCCCTGCTCAAAGCTaGATTTTGAATTCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: QAKSLDRLFPAVQPHPALSPAQS*ILNSVG
Trigger: GCCCACAGAATTCAAAATCAAGCTTTGAGCAGGGGA...AAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp TTCTGGCTGCCTCACTCCCCTGCTCAAAGCTTGATTTTGAATTCTGTGGGCTGCCAGTCCGATGGCCCATaGGTCATAAGCTTTGCCTTG +
Preference number: 5 (lower is better)
Translates to: FWLPHSPAQSLILNSVGCQSDGP*VISFAL
Trigger: CAAGGCAAAGCTTATGACCAATGGGCCATCGGACTG...GCAGCCCACAGAATTCAAAATCAAGCTTTGAGCAGGGGAGTGAGGCAGCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR CAA 90 bp AGGCCAGAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCTGCTGGGGAAACACCTaGCCTGGTAGAGCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: RPEMESQEQTDLFHSNKLCWGNT*PGRAAL
Trigger: CAGGGCAGCTCTACCAGGCAAGGTGTTTCCCCAGCA...GAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CAA 90 bp AACAAACAGTGCCCCTTGGTGGCAGCTGGATATATGCCTCCAGGCATCCCTGACAAATCTTGGGAGCTCTaGAGTATCTTCGGCATGTGC +
Preference number: 5 (lower is better)
Translates to: NKQCPLVAAGYMPPGIPDKSWEL*SIFGMC
Trigger: GCACATGCCGAAGATACTCAAGAGCTCCCAAGATTT...GTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACTGTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CAA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTAAATCTTGGGAGCTCTaGAGTATCTTCGGCATGTGC +
Preference number: 5 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLKSWEL*SIFGMC
Trigger: GCACATGCCGAAGATACTCAAGAGCTCCCAAGATTT...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CAA 90 bp TCATTCAGGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGAAATCTTGGGAGCTCTaGAGTATCTTCGGCATGTGC +
Preference number: 5 (lower is better)
Translates to: SFRDCLGSEVSSQLSAPMKSWEL*SIFGMC
Trigger: GCACATGCCGAAGATACTCAAGAGCTCCCAAGATTT...CATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCCTGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CAA 90 bp GGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGAGCCTCAAGCAAATCTaGGGAGCTCTTGAGTATCTT +
Preference number: 5 (lower is better)
Translates to: GGDDTGLQAKSLDRLFPASLKQI*GALEYL
Trigger: AAGATACTCAAGAGCTCCCAAGATTTGCTTGAGGCT...CGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS TCA 90 bp GTTCGAATAGAGGAAGGGAGAGCAGGAGCTGTGTATGCATCATTCTaGACCACTTTGGTGAGAGGGAGGGCCTTGGACATGGAAAGCTTG +
Preference number: 5 (lower is better)
Translates to: VRIEEGRAGAVYASF*TTLVRGRALDMESL
Trigger: CAAGCTTTCCATGTCCAAGGCCCTCCCTCTCACCAAAGTGGTTCAGAATGATGCATACACAGCTCCTGCTCTCCCTTCCTCTATTCGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000491021.1
ENST00000617178.4
CDS GCA 90 bp GAGGGCTTTTGTTCGAATAGAGGAAGGGAGAGCAGGAGCTGTGTATaGATCATTCTGAACCACTTTGGTGAGAGGGAGGGCCTTGGACAT +
Preference number: 5 (lower is better)
Translates to: EGFCSNRGRESRSCV*IILNHFGEREGLGH
Trigger: ATGTCCAAGGCCCTCCCTCTCACCAAAGTGGTTCAGAATGATGCATACACAGCTCCTGCTCTCCCTTCCTCTATTCGAACAAAAGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617178.4
CDS-3UTR CAA 90 bp TCACTCAGCCGCAGCAGGATGGGCTGGTCTGAGGTGATAACATTCCCATTCATGTCCTGCACTTTCCCTTaGATTCGAAATCGGGCATCT +
Preference number: 5 (lower is better)
Translates to: SLSRSRMGWSEVITFPFMSCTFP*IRNRAS
Trigger: AGATGCCCGATTTCGAATCAAAGGGAAAGTGCAGGA...CATGAATGGGAATGTTATCACCTCAGACCAGCCCATCCTGCTGCGGCTGAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR CAA 90 bp CAAGCCTACCTTGGCGATGAGATGAAGAAACATACTACAGGAAACGTTAACGTAACCAGTCGAGCTCGCTaGAGGGCCCCACACACACAG +
Preference number: 5 (lower is better)
Translates to: QAYLGDEMKKHTTGNVNVTSRAR*RAPHTQ
Trigger: CTGTGTGTGTGGGGCCCTCAAGCGAGCTCGACTGGT...TACGTTAACGTTTCCTGTAGTATGTTTCTTCATCTCATCGCCAAGGTAGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp TTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTTCCAGACACCGGTTGTaGTACTTCTTATATGCGGTG +
Preference number: 5 (lower is better)
Translates to: FQRPNQKRAGGYTKPGCGSRHRL*YFLYAV
Trigger: CACCGCATATAAGAAGTACAACAACCGGTGTCTGGA...ACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp AGGCCAGAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCGAGGCCCCTGAGGACTaGAAGAGTGCCTTCAGGATG +
Preference number: 5 (lower is better)
Translates to: RPEMESQEQTDLFHSNKLEAPED*KSAFRM
Trigger: CATCCTGAAGGCACTCTTCAAGTCCTCAGGGGCCTC...GAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTCTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp TCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTTAGCTCAAAGCTTGATTTaGAATTCTGTGGGCTGCGTG +
Preference number: 5 (lower is better)
Translates to: SKAQPEESWRLHKTRVWLAQSLI*NSVGCV
Trigger: CACGCAGCCCACAGAATTCAAAATCAAGCTTTGAGC...TAACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp TTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTTCCCCTGCTCAAAGCTaGATTTTGAATTCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: FQRPNQKRAGGYTKPGCGSPAQS*ILNSVG
Trigger: GCCCACAGAATTCAAAATCAAGCTTTGAGCAGGGGA...ACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS GCA 90 bp CAAGGCTTTTGTTCGAATAGAGGAAGGGAGAGCAGGAGCTGTGTATaGATCATTCTGAACCACTTTGGTGAGAGGGAGGGCCTTGGACAT +
Preference number: 5 (lower is better)
Translates to: QGFCSNRGRESRSCV*IILNHFGEREGLGH
Trigger: ATGTCCAAGGCCCTCCCTCTCACCAAAGTGGTTCAGAATGATGCATACACAGCTCCTGCTCTCCCTTCCTCTATTCGAACAAAAGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000491021.1
CDS GCA 90 bp CACACACAGAAAAGCTCAACAATGTCCTCCTCAGTGACTCGAGGGTaGAGATTATTCACAGTCATCTTGGTGCCTTCCAATGGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: HTQKSSTMSSSVTRG*RLFTVILVPSNGLS
Trigger: GCTGAGCCCATTGGAAGGCACCAAGATGACTGTGAATAATCTGCACCCTCGAGTCACTGAGGAGGACATTGTTGAGCTTTTCTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR CAA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTACCGTGGTCTGCTGCTaGCGAGAGTTCAACATCTCT +
Preference number: 5 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLTVVCC*REFNIS
Trigger: AGAGATGTTGAACTCTCGCAAGCAGCAGACCACGGT...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CAA 90 bp GACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTAATACACACAAAGGGAACCTGGATGGTTTaGGTGAGCTTCAGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: DTRALHPLHCLKSLIHTKGTWMV*VSFRAG
Trigger: CCCTGCTCTGAAGCTCACCAAAACCATCCAGGTTCC...CTTTGTGTGTATTAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252115.10
ENST00000445215.5
CDS-3UTR CAA 90 bp AAGAGCACAGGGCAGAACACAACACAGAAAGGCGGGTCCCATCCAGTGAGGAAGTGGTTATTGACAACATaGATTCTCATTCCGGCAGGA +
Preference number: 5 (lower is better)
Translates to: KSTGQNTTQKGGSHPVRKWLLTT*ILIPAG
Trigger: TCCTGCCGGAATGAGAATCAATGTTGTCAATAACCA...CTTCCTCACTGGATGGGACCCGCCTTTCTGTGTTGTGTTCTGCCCTGTGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp TTCTGGCTGCCTCACTCCCCTGCTCAAAGCTTGATTTTGAATTCTGTGGGCTGCTCCAGACACCGGTTGTaGTACTTCTTATATGCGGTG +
Preference number: 5 (lower is better)
Translates to: FWLPHSPAQSLILNSVGCSRHRL*YFLYAV
Trigger: CACCGCATATAAGAAGTACAACAACCGGTGTCTGGA...GCAGCCCACAGAATTCAAAATCAAGCTTTGAGCAGGGGAGTGAGGCAGCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR CAA 90 bp GCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCCAGTCCGATGGCCCATaGGTCATAAGCTTTGCCTTG +
Preference number: 5 (lower is better)
Translates to: ARNKLTSSIQISSKPKHCQSDGP*VISFAL
Trigger: CAAGGCAAAGCTTATGACCAATGGGCCATCGGACTG...GCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS GCA 90 bp CACACACAGAAAAGCTCAACAATGTCCTCCTCAGTGACTCGAGGGTaGAGATTATTCACAGTCATCTTGGTGCCTTCCAATGGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: HTQKSSTMSSSVTRG*RLFTVILVPSNGLR
Trigger: TCTCAGCCCATTGGAAGGCACCAAGATGACTGTGAATAATCTGCACCCTCGAGTCACTGAGGAGGACATTGTTGAGCTTTTCTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
ENST00000491021.1
CDS-3UTR CAA 90 bp AAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTTGGTTATTGACAACATaGATTCTCATTCCGGCAGGA +
Preference number: 5 (lower is better)
Translates to: KGKGELWRTSSGWRRHGTWLLTT*ILIPAG
Trigger: TCCTGCCGGAATGAGAATCAATGTTGTCAATAACCA...AGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp TTTCAAAGGCCCAACCAGAAGAGAGCTGGCGGCTACACAAAACCAGGGTGTGGTTGGTTATTGACAACATaGATTCTCATTCCGGCAGGA +
Preference number: 5 (lower is better)
Translates to: FQRPNQKRAGGYTKPGCGWLLTT*ILIPAG
Trigger: TCCTGCCGGAATGAGAATCAATGTTGTCAATAACCA...ACCACACCCTGGTTTTGTGTAGCCGCCAGCTCTCTTCTGGTTGGGCCTTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp AAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCTTGGCCTGGTGGTTATaGACAACATTGATTCTCATT +
Preference number: 5 (lower is better)
Translates to: KGELWRTSSGWRRHGTPSLAWWL*TTLILI
Trigger: AATGAGAATCAATGTTGTCAATAACCACCAGGCCAA...GCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp CTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGCTGGGGAAACACCTTTTGGCCTGGTGGTTATaGACAACATTGATTCTCATT +
Preference number: 5 (lower is better)
Translates to: LGSEVSSQLSAPMLGKHLLAWWL*TTLILI
Trigger: AATGAGAATCAATGTTGTCAATAACCACCAGGCCAA...AAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp AGGCCAGAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCGTCATAAGCTTTGCCTaGGGGAAACAGAGCCACCCT +
Preference number: 5 (lower is better)
Translates to: RPEMESQEQTDLFHSNKLVISFA*GKQSHP
Trigger: AGGGTGGCTCTGTTTCCCCAAGGCAAAGCTTATGAC...GAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTCTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp AAGAGCACAGGGCAGAACACAACACAGAAAGGCGGGTCCCATCCAGTGAGGAAGCATCCCCTCCATTGTTaGAAAAGCTTAATACACACA +
Preference number: 5 (lower is better)
Translates to: KSTGQNTTQKGGSHPVRKHPLHC*KSLIHT
Trigger: TGTGTGTATTAAGCTTTTCAAACAATGGAGGGGATG...CTTCCTCACTGGATGGGACCCGCCTTTCTGTGTTGTGTTCTGCCCTGTGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp TCATTCAGGGACTGCCTGGGCTCTGAAGTTTCGTCCCAACTGTCTGCGCCTATGTCTCCATCCCCTCCATaGTTTGAAAAGCTTAATACA +
Preference number: 5 (lower is better)
Translates to: SFRDCLGSEVSSQLSAPMSPSPP*FEKLNT
Trigger: TGTATTAAGCTTTTCAAACAATGGAGGGGATGGAGA...CATAGGCGCAGACAGTTGGGACGAAACTTCAGAGCCCAGGCAGTCCCTGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp CAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTTCTCCATCCCCTCCATaGTTTGAAAAGCTTAATACA +
Preference number: 5 (lower is better)
Translates to: QAKSLDRLFPAVQPHPALSPSPP*FEKLNT
Trigger: TGTATTAAGCTTTTCAAACAATGGAGGGGATGGAGA...AAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp GCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCTCCTGCACTTTCCCTTaGATTCGAAATCGGGCATCT +
Preference number: 5 (lower is better)
Translates to: ARNKLTSSIQISSKPKHCSCTFP*IRNRAS
Trigger: AGATGCCCGATTTCGAATCAAAGGGAAAGTGCAGGA...GCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CAA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAACCGTGGTCTGCTGCTaGCGAGAGTTCAACATCTCT +
Preference number: 5 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQTVVCC*REFNIS
Trigger: AGAGATGTTGAACTCTCGCAAGCAGCAGACCACGGT...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CAA 90 bp ATTGATGGGCTGTCACTCAGCCGCAGCAGGATGGGCTGGTCTGAGGTGATAACATCATATAAATTCTGTTaGGCCTGGTGGTTATTGACA +
Preference number: 5 (lower is better)
Translates to: IDGLSLSRSRMGWSEVITSYKFC*AWWLLT
Trigger: TGTCAATAACCACCAGGCCAAACAGAATTTATATGA...TGTTATCACCTCAGACCAGCCCATCCTGCTGCGGCTGAGTGACAGCCCATCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR CAA 90 bp CAAGCCAAGAGCTTAGATAGACTCTTCCCAGCGGTGCAGCCTCATCCTGCCCTTTCATATAAATTCTGTTaGGCCTGGTGGTTATTGACA +
Preference number: 5 (lower is better)
Translates to: QAKSLDRLFPAVQPHPALSYKFC*AWWLLT
Trigger: TGTCAATAACCACCAGGCCAAACAGAATTTATATGA...AAGGGCAGGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp CAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGTGTCCGGGACATGTaGGTCAAGGCTTTTGTTCGA +
Preference number: 5 (lower is better)
Translates to: QTDLFHSNKLQTQALHNGSVRDM*VKAFVR
Trigger: TCGAACAAAAGCCTTGACCAACATGTCCCGGACACT...CCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp GAACTTCCTCTGGGTGGAGACGACACGGGACTCCAAGCCAAGAGCTTAGATAGACATCCCCTCCATTGTTaGAAAAGCTTAATACACACA +
Preference number: 5 (lower is better)
Translates to: ELPLGGDDTGLQAKSLDRHPLHC*KSLIHT
Trigger: TGTGTGTATTAAGCTTTTCAAACAATGGAGGGGATG...TCTATCTAAGCTCTTGGCTTGGAGTCCCGTGTCGTCTCCACCCAGAGGAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS TCA 90 bp CTATGCCCACTTTACAGTGGGAGAAGCAGGTTTGGAGAGGCTCAATaGTTAACAAAGAGTGTCTCTAAGGAAGGCAGACACCATCTACTG +
Preference number: 5 (lower is better)
Translates to: LCPLYSGRSRFGEAQ*LTKSVSKEGRHHLL
Trigger: CAGTAGATGGTGTCTGCCTTCCTTAGAGACACTCTTTGTTAATCATTGAGCCTCTCCAAACCTGCTTCTCCCACTGTAAAGTGGGCATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463133.1
CDS-3UTR CAA 90 bp GAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCAGTGTCCGGGACATGTaGGTCAAGGCTTTTGTTCGA +
Preference number: 5 (lower is better)
Translates to: EMESQEQTDLFHSNKLQTSVRDM*VKAFVR
Trigger: TCGAACAAAAGCCTTGACCAACATGTCCCGGACACT...GGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp ACAACTCAAGGAAAAGGGAAAGGTGAACTCTGGAGAACTTCCTCTGGGTGGAGAAGCCTCAAGCAAATCTaGGGAGCTCTTGAGTATCTT +
Preference number: 5 (lower is better)
Translates to: TTQGKGKGELWRTSSGWRSLKQI*GALEYL
Trigger: AAGATACTCAAGAGCTCCCAAGATTTGCTTGAGGCT...TCTCCACCCAGAGGAAGTTCTCCAGAGTTCACCTTTCCCTTTTCCTTGAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp GACACCAGGGCTCTCCATCCCCTCCATTGTTTGAAAAGCTTAATACACACAAAGTTATTCACAGTCATCTaGGTGCCTTCCAATGGGCTC +
Preference number: 5 (lower is better)
Translates to: DTRALHPLHCLKSLIHTKLFTVI*VPSNGL
Trigger: GAGCCCATTGGAAGGCACCAAGATGACTGTGAATAA...CTTTGTGTGTATTAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445215.5
CDS-3UTR CAA 90 bp GAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCAAATCTTGGGAGCTCTaGAGTATCTTCGGCATGTGC +
Preference number: 5 (lower is better)
Translates to: EMESQEQTDLFHSNKLQTKSWEL*SIFGMC
Trigger: GCACATGCCGAAGATACTCAAGAGCTCCCAAGATTT...GGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000617178.4
CDS-3UTR CAA 90 bp CTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTCATATAAATTCTGTTaGGCCTGGTGGTTATTGACA +
Preference number: 5 (lower is better)
Translates to: LTSSIQISSKPKHCTMGGSYKFC*AWWLLT
Trigger: TGTCAATAACCACCAGGCCAAACAGAATTTATATGA...GCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp TTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGAGGCTGAGCCTTTCTCCATCCCCTCCATaGTTTGAAAAGCTTAATACA +
Preference number: 5 (lower is better)
Translates to: FHSNKLQTQALHNGRLSLSPSPP*FEKLNT
Trigger: TGTATTAAGCTTTTCAAACAATGGAGGGGATGGAGA...AAGGCTCAGCCTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp CAAGCCTACCTTGGCGATGAGATGAAGAAACATACTACAGGAAACGTTAACGTAAAATCTTGGGAGCTCTaGAGTATCTTCGGCATGTGC +
Preference number: 5 (lower is better)
Translates to: QAYLGDEMKKHTTGNVNVKSWEL*SIFGMC
Trigger: GCACATGCCGAAGATACTCAAGAGCTCCCAAGATTT...TACGTTAACGTTTCCTGTAGTATGTTTCTTCATCTCATCGCCAAGGTAGGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp CAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAAGCACTGCACAATGGGTTGGCCTGGTGGTTATaGACAACATTGATTCTCATT +
Preference number: 5 (lower is better)
Translates to: QTDLFHSNKLQTQALHNGLAWWL*TTLILI
Trigger: AATGAGAATCAATGTTGTCAATAACCACCAGGCCAA...CCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp GAAATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCATCCCCTCCATTGTTaGAAAAGCTTAATACACACA +
Preference number: 5 (lower is better)
Translates to: EMESQEQTDLFHSNKLQTHPLHC*KSLIHT
Trigger: TGTGTGTATTAAGCTTTTCAAACAATGGAGGGGATG...GGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS-3UTR CAA 90 bp ATGGAGAGCCAGGAACAAACTGACCTCTTCCATTCAAATAAGCTCCAAACCCAATCTCCATCCCCTCCATaGTTTGAAAAGCTTAATACA +
Preference number: 5 (lower is better)
Translates to: MESQEQTDLFHSNKLQTQSPSPP*FEKLNT
Trigger: TGTATTAAGCTTTTCAAACAATGGAGGGGATGGAGA...TTGGGTTTGGAGCTTATTTGAATGGAAGAGGTCAGTTTGTTCCTGGCTCTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
CDS CAA 90 bp GCCCCGCGCTTCCTGATGAGTTCGTCCAGGGAGATGTCCGCCATCTaGCTCCGCCGAGCAAGCCGAAAGCAGTCGAGACCCCGCGAGCCC +
Preference number: 6 (lower is better)
Translates to: APRFLMSSSREMSAI*LRRASRKQSRPREP
Trigger: GGGCTCGCGGGGTCTCGACTGCTTTCGGCTTGCTCGGCGGAGCAAGATGGCGGACATCTCCCTGGACGAACTCATCAGGAAGCGCGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348657.6
ENST00000451060.6
ENST00000617178.4
CDS CCA 72 bp ATCTTCTCCCGGGCATCAGCAACCTGGCGGGGCTTCTaGGGCACCGTGGTCTGCTGCTTGCGAGAGTTCAAC +
Preference number: 6 (lower is better)
Translates to: IFSRASATWRGF*GTVVCCLREFN
Trigger: GTTGAACTCTCGCAAGCAGCAGACCACGGTGCCCCAGAAGCCCCGCCAGGTTGCTGATGCCCGGGAGAAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000454057.1
ENST00000463133.1
ENST00000491021.1
ENST00000617178.4
CDS CCA 72 bp CTCTTCAAGCTGATCTTCTCCCGGGCATCAGCAACCTaGCGGGGCTTCTGGGGCACCGTGGTCTGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: LFKLIFSRASAT*RGFWGTVVCCL
Trigger: CAAGCAGCAGACCACGGTGCCCCAGAAGCCCCGCCAGGTTGCTGATGCCCGGGAGAAGATCAGCTTGAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000454057.1
ENST00000463133.1
ENST00000491021.1
ENST00000617178.4
CDS GCA 72 bp TCAGCAACCTGGCGGGGCTTCTGGGGCACCGTGGTCTaGTGCTTGCGAGAGTTCAACATCTCTCTGGCATCC +
Preference number: 6 (lower is better)
Translates to: SATWRGFWGTVV*CLREFNISLAS
Trigger: GGATGCCAGAGAGATGTTGAACTCTCGCAAGCAGCAGACCACGGTGCCCCAGAAGCCCCGCCAGGTTGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000454057.1
ENST00000463133.1
ENST00000491021.1
ENST00000617178.4
CDS CCA 72 bp GTGGCTGTGCGTGTTGACTGGCTGAGAAGGCCTTGCTaGATCCCAACTCGAGATCGGACACCTCCAACTCCC +
Preference number: 6 (lower is better)
Translates to: VAVRVDWLRRPC*IPTRDRTPPTP
Trigger: GGGAGTTGGAGGTGTCCGATCTCGAGTTGGGATCCAGCAAGGCCTTCTCAGCCAGTCAACACGCACAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000454057.1
ENST00000463133.1
ENST00000617178.4
CDS CAA 72 bp TTCCTGATGAGTTCGTCCAGGGAGATGTCCGCCATCTaGCTCCGCCGAGCAAGCCGAAAGCAGTCGAGACCC +
Preference number: 6 (lower is better)
Translates to: FLMSSSREMSAI*LRRASRKQSRP
Trigger: GGGTCTCGACTGCTTTCGGCTTGCTCGGCGGAGCAAGATGGCGGACATCTCCCTGGACGAACTCATCAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000348657.6
ENST00000451060.6
ENST00000617178.4
CDS TCA 72 bp CCGGGCATCCTTGACTCCCAGTTTGAGCCGGGCATCTaGGAGGCCAATCTTCTGCCGGGCATCAAATCTCTG +
Preference number: 6 (lower is better)
Translates to: PGILDSQFEPGI*EANLLPGIKSL
Trigger: CAGAGATTTGATGCCCGGCAGAAGATTGGCCTCTCAGATGCCCGGCTCAAACTGGGAGTCAAGGATGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000454057.1
ENST00000463133.1
ENST00000617178.4
CDS GCA 72 bp CCCAGTTTGAGCCGGGCATCTGAGAGGCCAATCTTCTaGCGGGCATCAAATCTCTGCTGGAAGGTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: PSLSRASERPIF*RASNLCWKVAV
Trigger: CACAGCCACCTTCCAGCAGAGATTTGATGCCCGGCAGAAGATTGGCCTCTCAGATGCCCGGCTCAAACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000454057.1
ENST00000463133.1
ENST00000617178.4
CDS CAA 72 bp TGCAAAAGCTTCTCCCGGGCATCCTTGACTCCCAGTTaGAGCCGGGCATCTGAGAGGCCAATCTTCTGCCGG +
Preference number: 6 (lower is better)
Translates to: CKSFSRASLTPS*SRASERPIFCR
Trigger: CCGGCAGAAGATTGGCCTCTCAGATGCCCGGCTCAAACTGGGAGTCAAGGATGCCCGGGAGAAGCTTTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000454057.1
ENST00000463133.1
ENST00000617178.4
CDS CAA 72 bp CGGGCATCTTTCTGCAAAAGCTTCTCCCGGGCATCCTaGACTCCCAGTTTGAGCCGGGCATCTGAGAGGCCA +
Preference number: 6 (lower is better)
Translates to: RASFCKSFSRAS*TPSLSRASERP
Trigger: TGGCCTCTCAGATGCCCGGCTCAAACTGGGAGTCAAGGATGCCCGGGAGAAGCTTTTGCAGAAAGATGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000454057.1
ENST00000463133.1
ENST00000617178.4
CDS GCA 72 bp TCTGAGAGGCCAATCTTCTGCCGGGCATCAAATCTCTaGTGGAAGGTGGCTGTGCGTGTTGACTGGCTGAGA +
Preference number: 6 (lower is better)
Translates to: SERPIFCRASNL*WKVAVRVDWLR
Trigger: TCTCAGCCAGTCAACACGCACAGCCACCTTCCAGCAGAGATTTGATGCCCGGCAGAAGATTGGCCTCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000454057.1
ENST00000463133.1
ENST00000617178.4
CDS CAA 90 bp GCATCTTTCTGCAAAAGCTTCTCCCGGGCATCCTTGACTCCCAGTTaGAGCCGGGCATCTGAGAGGCCAATCTTCTGCCGGGCATCAAAT +
Preference number: 6 (lower is better)
Translates to: ASFCKSFSRASLTPS*SRASERPIFCRASN
Trigger: ATTTGATGCCCGGCAGAAGATTGGCCTCTCAGATGCCCGGCTCAAACTGGGAGTCAAGGATGCCCGGGAGAAGCTTTTGCAGAAAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000454057.1
ENST00000463133.1
ENST00000617178.4
CDS CAA 90 bp ATGTCCTCCTCAGTGACTCGAGGGTGCAGATTATTCACAGTCATCTaGGTGCCTTCCAATGGGCTGAGAACAGGCTCAGCAGCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: MSSSVTRGCRLFTVI*VPSNGLRTGSAAGS
Trigger: GCTGCCAGCTGCTGAGCCTGTTCTCAGCCCATTGGAAGGCACCAAGATGACTGTGAATAATCTGCACCCTCGAGTCACTGAGGAGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
ENST00000491021.1
CDS TCA 72 bp GAGGAAGGGAGAGCAGGAGCTGTGTATGCATCATTCTaGACCACTTTGGTGAGAGGGAGGGCCTTGGACATG +
Preference number: 6 (lower is better)
Translates to: EEGRAGAVYASF*TTLVRGRALDM
Trigger: CATGTCCAAGGCCCTCCCTCTCACCAAAGTGGTTCAGAATGATGCATACACAGCTCCTGCTCTCCCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000491021.1
ENST00000617178.4
CDS TCA 72 bp GGAAAGGCCTGGTCCCATGTGGTGGAGAAAGCCGCCTaGGGCTGCAAACTTCATCTGTTTAGTAGGAACGGA +
Preference number: 6 (lower is better)
Translates to: GKAWSHVVEKAA*GCKLHLFSRNG
Trigger: TCCGTTCCTACTAAACAGATGAAGTTTGCAGCCTCAGGCGGCTTTCTCCACCACATGGGACCAGGCCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454057.1
ENST00000491021.1
CDS CAA 90 bp ATTCGAAATCGGGCATCTTTCTGCAAAAGCTTCTCCCGGGCATCCTaGACTCCCAGTTTGAGCCGGGCATCTGAGAGGCCAATCTTCTGC +
Preference number: 6 (lower is better)
Translates to: IRNRASFCKSFSRAS*TPSLSRASERPIFC
Trigger: GCAGAAGATTGGCCTCTCAGATGCCCGGCTCAAACTGGGAGTCAAGGATGCCCGGGAGAAGCTTTTGCAGAAAGATGCCCGATTTCGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000454057.1
ENST00000463133.1
ENST00000617178.4
CDS CAA 90 bp TGCTTAGCCCAGCTGAGCAAGCTGATAGTTCCCTTGATAGCAGACTaGAGCAGTCTAATTACTGGAAAGGCCTGGTCCCATGTGGTGGAG +
Preference number: 6 (lower is better)
Translates to: CLAQLSKLIVPLIAD*SSLITGKAWSHVVE
Trigger: CTCCACCACATGGGACCAGGCCTTTCCAGTAATTAGACTGCTCAAGTCTGCTATCAAGGGAACTATCAGCTTGCTCAGCTGGGCTAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491021.1
CDS TCA 72 bp CAGGAGCTGTGTATGCATCATTCTGAACCACTTTGGTaGGAGGGAGGGCCTTGGACATGGAAAGCTTGGAAC +
Preference number: 6 (lower is better)
Translates to: QELCMHHSEPLW*EGGPWTWKAWN
Trigger: GTTCCAAGCTTTCCATGTCCAAGGCCCTCCCTCTCACCAAAGTGGTTCAGAATGATGCATACACAGCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000491021.1
ENST00000617178.4
CDS GCA 72 bp TGTTCGAATAGAGGAAGGGAGAGCAGGAGCTGTGTATaGATCATTCTGAACCACTTTGGTGAGAGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: CSNRGRESRSCV*IILNHFGEREG
Trigger: GCCCTCCCTCTCACCAAAGTGGTTCAGAATGATGCATACACAGCTCCTGCTCTCCCTTCCTCTATTCGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000491021.1
ENST00000617178.4
CDS GCA 72 bp ATTGATTCTCATTCCGGCAGGATGGGGATGAAGTGGTaGCATGGCTTTCTGCTGTGGAACCTGGAAACACTC +
Preference number: 6 (lower is better)
Translates to: IDSHSGRMGMKW*HGFLLWNLETL
Trigger: GAGTGTTTCCAGGTTCCACAGCAGAAAGCCATGGCACCACTTCATCCCCATCCTGCCGGAATGAGAATCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451060.6
CDS CCA 72 bp AACATTGATTCTCATTCCGGCAGGATGGGGATGAAGTaGTGCCATGGCTTTCTGCTGTGGAACCTGGATGGT +
Preference number: 6 (lower is better)
Translates to: NIDSHSGRMGMK*CHGFLLWNLDG
Trigger: ACCATCCAGGTTCCACAGCAGAAAGCCATGGCACCACTTCATCCCCATCCTGCCGGAATGAGAATCAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000491021.1
CDS CCA 72 bp GTGCAGATTATTCACAGTCATCTTGGTGCCTTCCAATaGGCTGAGAACAGGCTCAGCAGCTGGCAGCTCTTT +
Preference number: 6 (lower is better)
Translates to: VQIIHSHLGAFQ*AENRLSSWQLF
Trigger: AAAGAGCTGCCAGCTGCTGAGCCTGTTCTCAGCCCATTGGAAGGCACCAAGATGACTGTGAATAATCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
ENST00000491021.1
CDS CAA 72 bp GGGGGTTCTTCCTTGTTCACCAGTGTCCGGGACATGTaGGTCAAGGCTTTTGTTCGAATAGAGGAAGGGAGA +
Preference number: 6 (lower is better)
Translates to: GGSSLFTSVRDM*VKAFVRIEEGR
Trigger: TCTCCCTTCCTCTATTCGAACAAAAGCCTTGACCAACATGTCCCGGACACTGGTGAACAAGGAAGAACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000491021.1
CDS CAA 72 bp TCAGTGACTCGAGGGTGCAGATTATTCACAGTCATCTaGGTGCCTTCCAATGGGCTGAGAACAGGCTCAGCA +
Preference number: 6 (lower is better)
Translates to: SVTRGCRLFTVI*VPSNGLRTGSA
Trigger: TGCTGAGCCTGTTCTCAGCCCATTGGAAGGCACCAAGATGACTGTGAATAATCTGCACCCTCGAGTCACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000451060.6
ENST00000491021.1
CDS GCA 72 bp TGCACTTTCCCTTTGATTCGAAATCGGGCATCTTTCTaGAAAAGCTTCTCCCGGGCATCCTTGACTCCCAGT +
Preference number: 6 (lower is better)
Translates to: CTFPLIRNRASF*KSFSRASLTPS
Trigger: ACTGGGAGTCAAGGATGCCCGGGAGAAGCTTTTGCAGAAAGATGCCCGATTTCGAATCAAAGGGAAAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000252115.10
ENST00000339677.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000454057.1
ENST00000463133.1
ENST00000617178.4
CDS GCA 72 bp ATTGATTCTCATTCCGGCAGGATGGGGATGAAGTGGTaGCATGGCTTTCTGCTGTGGAACCTGGATGGTTTT +
Preference number: 6 (lower is better)
Translates to: IDSHSGRMGMKW*HGFLLWNLDGF
Trigger: AAAACCATCCAGGTTCCACAGCAGAAAGCCATGGCACCACTTCATCCCCATCCTGCCGGAATGAGAATCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252115.10
ENST00000445215.5
ENST00000491021.1
CDS CCA 72 bp AACATTGATTCTCATTCCGGCAGGATGGGGATGAAGTaGTGCCATGGCTTTCTGCTGTGGAACCTGGAAACA +
Preference number: 6 (lower is better)
Translates to: NIDSHSGRMGMK*CHGFLLWNLET
Trigger: TGTTTCCAGGTTCCACAGCAGAAAGCCATGGCACCACTTCATCCCCATCCTGCCGGAATGAGAATCAATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451060.6
CDS TCA 72 bp CACACACACAGAAAAGCTCAACAATGTCCTCCTCAGTaGCTCGAGGGTGCAGATTATTCACAGTCATCTTGG +
Preference number: 6 (lower is better)
Translates to: HTHRKAQQCPPQ*LEGADYSQSSW
Trigger: CCAAGATGACTGTGAATAATCTGCACCCTCGAGTCACTGAGGAGGACATTGTTGAGCTTTTCTGTGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000491021.1
CDS TCA 72 bp CTTTACAGTGGGAGAAGCAGGTTTGGAGAGGCTCAATaGTTAACAAAGAGTGTCTCTAAGGAAGGCAGACAC +
Preference number: 6 (lower is better)
Translates to: LYSGRSRFGEAQ*LTKSVSKEGRH
Trigger: GTGTCTGCCTTCCTTAGAGACACTCTTTGTTAATCATTGAGCCTCTCCAAACCTGCTTCTCCCACTGTAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463133.1
CDS GCA 72 bp AAAAGCTCAACAATGTCCTCCTCAGTGACTCGAGGGTaGAGATTATTCACAGTCATCTTGGTGCCTTCCAAT +
Preference number: 6 (lower is better)
Translates to: KSSTMSSSVTRG*RLFTVILVPSN
Trigger: ATTGGAAGGCACCAAGATGACTGTGAATAATCTGCACCCTCGAGTCACTGAGGAGGACATTGTTGAGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000252115.10
ENST00000348657.6
ENST00000445215.5
ENST00000451060.6
ENST00000491021.1
CDS CAA 72 bp AACTGCTTAGCCCAGCTGAGCAAGCTGATAGTTCCCTaGATAGCAGACTTGAGCAGTCTAATTACTGGAAAG +
Preference number: 6 (lower is better)
Translates to: NCLAQLSKLIVP*IADLSSLITGK
Trigger: CTTTCCAGTAATTAGACTGCTCAAGTCTGCTATCAAGGGAACTATCAGCTTGCTCAGCTGGGCTAAGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491021.1