RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POLD4 (Homo sapiens)

Ensembl gene IDs: ENSG00000175482

Ensembl transcript IDs: ENST00000312419.8, ENST00000524743.1, ENST00000528087.1, ENST00000529000.1, ENST00000529704.5, ENST00000530584.5, ENST00000531239.2, ENST00000532830.5, ENST00000533429.1, ENST00000534515.1, ENST00000539074.1, ENST00000542982.1

Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GACACCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTaGGCTGAGCAGGAGCAATGGGCTCTCGCTTCTGTCCTGAGGTTC +
Preference number: 1 (lower is better)
Translates to: DTSRFCLPRVPPQPG*AEQEQWALASVLRF
Trigger: GAACCTCAGGACAGAAGCGAGAGCCCATTGCTCCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
3UTR CCA 90 bp TCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTaGTTAGATGGAGGAGTTGAGCCTCTGACACCTCCAGGTTCTGCC +
Preference number: 1 (lower is better)
Translates to: SASAAQALPGTLGAC*LDGGVEPLTPPGSA
Trigger: GGCAGAACCTGGAGGTGTCAGAGGCTCAACTCCTCCATCTAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR CCA 90 bp TGTCTGAGCAGGTCCTGCAAGTTGAGACCCTCGCCAGCCCTGCTTTaGATCAAGGTGGCCCCCGATGTGGGAAGCCAGAGGTGCTTGCTG +
Preference number: 1 (lower is better)
Translates to: CLSRSCKLRPSPALL*IKVAPDVGSQRCLL
Trigger: CAGCAAGCACCTCTGGCTTCCCACATCGGGGGCCACCTTGATCCAAAGCAGGGCTGGCGAGGGTCTCAACTTGCAGGACCTGCTCAGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR TCA 90 bp AGCCGGGCTGAGCTGAGCAGGAGCAATGGGCTCTCGCTTCTGTCCTaGGGTTCTTGGGTGGTGAGCAAGAGAGCTAAGGGCAGGAGGTCT +
Preference number: 1 (lower is better)
Translates to: SRAELSRSNGLSLLS*GSWVVSKRAKGRRS
Trigger: AGACCTCCTGCCCTTAGCTCTCTTGCTCACCACCCAAGAACCTCAGGACAGAAGCGAGAGCCCATTGCTCCTGCTCAGCTCAGCCCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
3UTR GCA 90 bp TGGTTAGATGGAGGAGTTGAGCCTCTGACACCTCCAGGTTCTGCCTaGCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGAGCAAT +
Preference number: 1 (lower is better)
Translates to: WLDGGVEPLTPPGSA*QGFLRSRAELSRSN
Trigger: ATTGCTCCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGGTGTCAGAGGCTCAACTCCTCCATCTAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
3UTR GCA 90 bp CACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTaGTGGTTAGATGGAGGAGTTGAGCCTCTGACACCTCCAGGTTCT +
Preference number: 1 (lower is better)
Translates to: HSASAAQALPGTLGA*WLDGGVEPLTPPGS
Trigger: AGAACCTGGAGGTGTCAGAGGCTCAACTCCTCCATCTAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR TCA 90 bp GAGCCACCGCGCCCAGCCATCAGTTTCTTACCAAAGCCCCTCAGATaGTGGTCATGTCTGAGCAGGTCCTGCAAGTTGAGACCCTCGCCA +
Preference number: 1 (lower is better)
Translates to: EPPRPAISFLPKPLR*WSCLSRSCKLRPSP
Trigger: TGGCGAGGGTCTCAACTTGCAGGACCTGCTCAGACATGACCATCATCTGAGGGGCTTTGGTAAGAAACTGATGGCTGGGCGCGGTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR GCA 90 bp TGCTTTGGATCAAGGTGGCCCCCGATGTGGGAAGCCAGAGGTGCTTaGTGGGAATGTATAGATATGTTTGGACTTCATGAGCTATGGACC +
Preference number: 1 (lower is better)
Translates to: CFGSRWPPMWEARGA*WECIDMFGLHELWT
Trigger: GGTCCATAGCTCATGAAGTCCAAACATATCTATACATTCCCAGCAAGCACCTCTGGCTTCCCACATCGGGGGCCACCTTGATCCAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR TCA 90 bp AACTTGCTAGGGACTGCCAGTCAAAGCAGGGCCACAGTAAAGGACTaGAGGTCAGGATTCCAGGCTCAATATTCTTTATTGATAAGCATT +
Preference number: 1 (lower is better)
Translates to: NLLGTASQSRATVKD*RSGFQAQYSLLISI
Trigger: AATGCTTATCAATAAAGAATATTGAGCCTGGAATCCTGACCTTCAGTCCTTTACTGTGGCCCTGCTTTGACTGGCAGTCCCTAGCAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR-3UTR TCA 90 bp TCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTTAGATGGAGGACCTCCGCAGCCGGGCTaGGCTGAGCAGGAGCAATGG +
Preference number: 2 (lower is better)
Translates to: SAAQALPGTLGACWLDGGPPQPG*AEQEQW
Trigger: CCATTGCTCCTGCTCAGCTCAGCCCGGCTGCGGAGG...TCCTCCATCTAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR TCA 90 bp CCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGCTCTCGCTTCTGTCCTaGGGTTCTTGGGTGGTGAGC +
Preference number: 2 (lower is better)
Translates to: PPGSACQGFLRSRAELSRLSLLS*GSWVVS
Trigger: GCTCACCACCCAAGAACCTCAGGACAGAAGCGAGAG...CCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR TCA 90 bp TCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTCCTCCGCAGCCGGGCTaGGCTGAGCAGGAGCAATGG +
Preference number: 2 (lower is better)
Translates to: SRSTLLQLRRLFRGLWEPPPQPG*AEQEQW
Trigger: CCATTGCTCCTGCTCAGCTCAGCCCGGCTGCGGAGG...AGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR GCA 90 bp AGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTCCTCCAGGTTCTGCCTaGCAAGGGTTCCTCCGCAGC +
Preference number: 2 (lower is better)
Translates to: RSTLLQLRRLFRGLWEPAPPGSA*QGFLRS
Trigger: GCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG...AGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR TCA 90 bp AAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGCTCTCGCTTCTGTCCTaGGGTTCTTGGGTGGTGAGC +
Preference number: 2 (lower is better)
Translates to: KHSASAAQALPGTLGACWLSLLS*GSWVVS
Trigger: GCTCACCACCCAAGAACCTCAGGACAGAAGCGAGAG...CCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR TCA 90 bp AGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTCTCTCGCTTCTGTCCTaGGGTTCTTGGGTGGTGAGC +
Preference number: 2 (lower is better)
Translates to: STLLQLRRLFRGLWEPAGLSLLS*GSWVVS
Trigger: GCTCACCACCCAAGAACCTCAGGACAGAAGCGAGAG...ACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR GCA 90 bp CCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTCCAGGTTCTGCCTaGCAAGGGTTCCTCCGCAGC +
Preference number: 2 (lower is better)
Translates to: PSRSTLLQLRRLFRGLWEPPGSA*QGFLRS
Trigger: GCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG...CTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR CCA 90 bp GAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGCTGAGCAGGAGCAATaGGCTCTCGCTTCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: EALCFSCAGSSGDSGSLLAEQEQ*ALASVL
Trigger: CAGGACAGAAGCGAGAGCCCATTGCTCCTGCTCAGC...CAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR CCA 90 bp AAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGGCTGAGCAGGAGCAATaGGCTCTCGCTTCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: KHSASAAQALPGTLGACWAEQEQ*ALASVL
Trigger: CAGGACAGAAGCGAGAGCCCATTGCTCCTGCTCAGC...CCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR CAA 90 bp TGGGCCACCAGGGGGCACCAGAGGTCGCTCAGCTCTTCCGAGGACTaGATCCGTCTCAAGATGACTGTCTCCTCCCTCTTCGGCCTAGGA +
Preference number: 2 (lower is better)
Translates to: WATRGHQRSLSSSED*IRLKMTVSSLFGLG
Trigger: TCCTAGGCCGAAGAGGGAGGAGACAGTCATCTTGAGACGGATCAAGTCCTCGGAAGAGCTGAGCGACCTCTGGTGCCCCCTGGTGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR-3UTR TCA 90 bp GTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCAGGTATTGGAAGGCCTCCGCAGCCGGGCTaGGCTGAGCAGGAGCAATGG +
Preference number: 2 (lower is better)
Translates to: VPNLPDHGSGRQAAGIGRPPQPG*AEQEQW
Trigger: CCATTGCTCCTGCTCAGCTCAGCCCGGCTGCGGAGG...CCTTCCAATACCTGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR CAA 90 bp ATGTCTGAGCAGGTCCTGCAAGTTGAGACCCTCGCCAGCCCTGCTTaGGATCAAGGTGGCCCCCGATGTGGGAAGCCAGAGGTGCTTGCT +
Preference number: 2 (lower is better)
Translates to: MSEQVLQVETLASPA*DQGGPRCGKPEVLA
Trigger: AGCAAGCACCTCTGGCTTCCCACATCGGGGGCCACCTTGATCCAAAGCAGGGCTGGCGAGGGTCTCAACTTGCAGGACCTGCTCAGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR-3UTR TCA 90 bp TTGCCCTGGGAGCTCAGCCAGTCCTGCTCTCAGATTCCTGGCCTTAGGTGGGAGCTCTCGCTTCTGTCCTaGGGTTCTTGGGTGGTGAGC +
Preference number: 2 (lower is better)
Translates to: LPWELSQSCSQIPGLRWELSLLS*GSWVVS
Trigger: GCTCACCACCCAAGAACCTCAGGACAGAAGCGAGAG...CTCCCACCTAAGGCCAGGAATCTGAGAGCAGGACTGGCTGAGCTCCCAGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
3UTR-3UTR TCA 90 bp CCTGCTTTGGATCAAGGTGGCCCCCGATGTGGGAAGCCAGAGGTGCTTGCTGGGCCAGAAGGTGAGTCATaGGTAGTTTCCCTGTGGGCC +
Preference number: 2 (lower is better)
Translates to: PALDQGGPRCGKPEVLAGPEGES*VVSLWA
Trigger: GGCCCACAGGGAAACTACTCATGACTCACCTTCTGG...CCCAGCAAGCACCTCTGGCTTCCCACATCGGGGGCCACCTTGATCCAAAGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR-3UTR GCA 90 bp GTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCAGGTATTGGAAGGCCTCCAGGTTCTGCCTaGCAAGGGTTCCTCCGCAGC +
Preference number: 2 (lower is better)
Translates to: VPNLPDHGSGRQAAGIGRPPGSA*QGFLRS
Trigger: GCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG...CCTTCCAATACCTGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR TCA 90 bp ACTCTCCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTCTCTCGCTTCTGTCCTaGGGTTCTTGGGTGGTGAGC +
Preference number: 2 (lower is better)
Translates to: TLHLEALCFSCAGSSGDSLSLLS*GSWVVS
Trigger: GCTCACCACCCAAGAACCTCAGGACAGAAGCGAGAG...AGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR CCA 90 bp ACTCTCCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGCTGAGCAGGAGCAATaGGCTCTCGCTTCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: TLHLEALCFSCAGSSGDSAEQEQ*ALASVL
Trigger: CAGGACAGAAGCGAGAGCCCATTGCTCCTGCTCAGC...AGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR GCA 90 bp GTAGTGGTGCCTCTCTCATCTCCTAACTTGCTAGGGACTGCCAGTCAAAGCAGGGACACCTCCAGGTTCTaGCTGCCAAGGGTTCCTCCG +
Preference number: 2 (lower is better)
Translates to: VVVPLSSPNLLGTASQSRDTSRF*LPRVPP
Trigger: CGGAGGAACCCTTGGCAGGCAGAACCTGGAGGTGTC...CCTGCTTTGACTGGCAGTCCCTAGCAAGTTAGGAGATGAGAGAGGCACCACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR-3UTR CCA 90 bp GTCGCTCAGCTCTTCCGAGGACTTGATCCGTCTCAAGATGACTGTCTCCTCCCTGCTGAGCAGGAGCAATaGGCTCTCGCTTCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: VAQLFRGLDPSQDDCLLPAEQEQ*ALASVL
Trigger: CAGGACAGAAGCGAGAGCCCATTGCTCCTGCTCAGC...AGGGAGGAGACAGTCATCTTGAGACGGATCAAGTCCTCGGAAGAGCTGAGCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR-3UTR TCA 90 bp GTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCAGGTATTGGAAGGGTTAGATGGAGGAGTTaGGCCTCTGACACCTCCAGG +
Preference number: 2 (lower is better)
Translates to: VPNLPDHGSGRQAAGIGRVRWRS*ASDTSR
Trigger: CCTGGAGGTGTCAGAGGCTCAACTCCTCCATCTAAC...CCTTCCAATACCTGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR GCA 90 bp TCCTCATGGATCAACTGTCCATGTCTGACTGTGCCTAACTTGCCAGATCATGGGCCTCCAGGTTCTGCCTaGCAAGGGTTCCTCCGCAGC +
Preference number: 2 (lower is better)
Translates to: SSWINCPCLTVPNLPDHGPPGSA*QGFLRS
Trigger: GCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG...CCCATGATCTGGCAAGTTAGGCACAGTCAGACATGGACAGTTGATCCATGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR GCA 90 bp TCCTCATGGATCAACTGTCCATGTCTGACTGTGCCTAACTTGCCAGATCATGGGGCACTCTGCTTCAGCTaGGCAGGCTCTTCCGGGGAC +
Preference number: 2 (lower is better)
Translates to: SSWINCPCLTVPNLPDHGALCFS*AGSSGD
Trigger: GTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGC...CCCATGATCTGGCAAGTTAGGCACAGTCAGACATGGACAGTTGATCCATGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR TCA 90 bp ATCTTTTCCTCATGGATCAACTGTCCATGTCTGACTGTGCCTAACTTGCCAGATCCTCCGCAGCCGGGCTaGGCTGAGCAGGAGCAATGG +
Preference number: 2 (lower is better)
Translates to: IFSSWINCPCLTVPNLPDPPQPG*AEQEQW
Trigger: CCATTGCTCCTGCTCAGCTCAGCCCGGCTGCGGAGG...ATCTGGCAAGTTAGGCACAGTCAGACATGGACAGTTGATCCATGAGGAAAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR TCA 90 bp CTGTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCAGGTATTGGAAGTTAGATGGAGGAGTTaGGCCTCTGACACCTCCAGG +
Preference number: 2 (lower is better)
Translates to: LCLTCQIMGQGDRQQVLEVRWRS*ASDTSR
Trigger: CCTGGAGGTGTCAGAGGCTCAACTCCTCCATCTAAC...TTCCAATACCTGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR GCA 90 bp GTAGTGGTGCCTCTCTCATCTCCTAACTTGCTAGGGACTGCCAGTCAAAGCAGGGGGACTCTGGGAGCCTaGTGGTTAGATGGAGGAGTT +
Preference number: 2 (lower is better)
Translates to: VVVPLSSPNLLGTASQSRGTLGA*WLDGGV
Trigger: AACTCCTCCATCTAACCAGCAGGCTCCCAGAGTCCC...CCTGCTTTGACTGGCAGTCCCTAGCAAGTTAGGAGATGAGAGAGGCACCACTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR-3UTR CCA 90 bp AGGTGGCCCCCGATGTGGGAAGCCAGAGGTGCTTGCTGGGAATGTATAGATATGACTCTGGGAGCCTGCTaGTTAGATGGAGGAGTTGAG +
Preference number: 2 (lower is better)
Translates to: RWPPMWEARGACWECIDMTLGAC*LDGGVE
Trigger: CTCAACTCCTCCATCTAACCAGCAGGCTCCCAGAGT...CATATCTATACATTCCCAGCAAGCACCTCTGGCTTCCCACATCGGGGGCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR-3UTR CCA 90 bp CTTACCAAAGCCCCTCAGATGATGGTCATGTCTGAGCAGGTCCTGCAAGTTGAGTGCTTTGGATCAAGGTaGCCCCCGATGTGGGAAGCC +
Preference number: 2 (lower is better)
Translates to: LTKAPQMMVMSEQVLQVECFGSR*PPMWEA
Trigger: GGCTTCCCACATCGGGGGCCACCTTGATCCAAAGCA...CTCAACTTGCAGGACCTGCTCAGACATGACCATCATCTGAGGGGCTTTGGTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR-3UTR TCA 90 bp CTTACCAAAGCCCCTCAGATGATGGTCATGTCTGAGCAGGTCCTGCAAGTTGAGGCAGGTATTGGAAGGTaGTGGCCAGGTCCTTTTCCC +
Preference number: 2 (lower is better)
Translates to: LTKAPQMMVMSEQVLQVEAGIGR*WPGPFP
Trigger: GGGAAAAGGACCTGGCCATCACCTTCCAATACCTGC...CTCAACTTGCAGGACCTGCTCAGACATGACCATCATCTGAGGGGCTTTGGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR-3UTR GCA 90 bp CTTCGGCCTAGGACTTTCTTGAAGGAAAAGAGCTGTAGTGGTGCCTCTCTCATCGGGACTCTGGGAGCCTaGTGGTTAGATGGAGGAGTT +
Preference number: 2 (lower is better)
Translates to: LRPRTFLKEKSCSGASLIGTLGA*WLDGGV
Trigger: AACTCCTCCATCTAACCAGCAGGCTCCCAGAGTCCC...GATGAGAGAGGCACCACTACAGCTCTTTTCCTTCAAGAAAGTCCTAGGCCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR-3UTR GCA 90 bp TCCTCATGGATCAACTGTCCATGTCTGACTGTGCCTAACTTGCCAGATCATGGGGGGACTCTGGGAGCCTaGTGGTTAGATGGAGGAGTT +
Preference number: 2 (lower is better)
Translates to: SSWINCPCLTVPNLPDHGGTLGA*WLDGGV
Trigger: AACTCCTCCATCTAACCAGCAGGCTCCCAGAGTCCC...CCCATGATCTGGCAAGTTAGGCACAGTCAGACATGGACAGTTGATCCATGAGGA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR GCA 90 bp ATCTTTTCCTCATGGATCAACTGTCCATGTCTGACTGTGCCTAACTTGCCAGATGCACTCTGCTTCAGCTaGGCAGGCTCTTCCGGGGAC +
Preference number: 2 (lower is better)
Translates to: IFSSWINCPCLTVPNLPDALCFS*AGSSGD
Trigger: GTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGC...ATCTGGCAAGTTAGGCACAGTCAGACATGGACAGTTGATCCATGAGGAAAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR GCA 90 bp TCCTCATGGATCAACTGTCCATGTCTGACTGTGCCTAACTTGCCAGATCATGGGCATCTAGAAGCACTCTaGTTCAGCTGCGCAGGCTCT +
Preference number: 2 (lower is better)
Translates to: SSWINCPCLTVPNLPDHGHLEAL*FSCAGS
Trigger: AGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATG...CCCATGATCTGGCAAGTTAGGCACAGTCAGACATGGACAGTTGATCCATGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR CAA 90 bp ATCTTTTCCTCATGGATCAACTGTCCATGTCTGACTGTGCCTAACTaGCCAGATCATGGGTCAGGGAGACAGGCAGCAGGTATTGGAAGG +
Preference number: 2 (lower is better)
Translates to: IFSSWINCPCLTVPN*PDHGSGRQAAGIGR
Trigger: CCTTCCAATACCTGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCACAGTCAGACATGGACAGTTGATCCATGAGGAAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR CCA 90 bp TGTCTCCTCCCTCTTCGGCCTAGGACTTTCTTGAAGGAAAAGAGCTGTAGTGGTATTCCTGGCCTTAGGTaGGAGAGCATCTTTTCCTCA +
Preference number: 2 (lower is better)
Translates to: CLLPLRPRTFLKEKSCSGIPGLR*ESIFSS
Trigger: TGAGGAAAAGATGCTCTCCCACCTAAGGCCAGGAAT...ACCACTACAGCTCTTTTCCTTCAAGAAAGTCCTAGGCCGAAGAGGGAGGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR GCA 72 bp GGAGGAGTTGAGCCTCTGACACCTCCAGGTTCTGCCTaGCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGC +
Preference number: 3 (lower is better)
Translates to: GGVEPLTPPGSA*QGFLRSRAELS
Trigger: GCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGGTGTCAGAGGCTCAACTCCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
3UTR CCA 72 bp GCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTaGTTAGATGGAGGAGTTGAGCCTCTGACACCTCCA +
Preference number: 3 (lower is better)
Translates to: AAQALPGTLGAC*LDGGVEPLTPP
Trigger: TGGAGGTGTCAGAGGCTCAACTCCTCCATCTAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR CCA 72 bp AGGTCCTGCAAGTTGAGACCCTCGCCAGCCCTGCTTTaGATCAAGGTGGCCCCCGATGTGGGAAGCCAGAGG +
Preference number: 3 (lower is better)
Translates to: RSCKLRPSPALL*IKVAPDVGSQR
Trigger: CCTCTGGCTTCCCACATCGGGGGCCACCTTGATCCAAAGCAGGGCTGGCGAGGGTCTCAACTTGCAGGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR GCA 72 bp TCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTaGTGGTTAGATGGAGGAGTTGAGCCTCTGACACCT +
Preference number: 3 (lower is better)
Translates to: SAAQALPGTLGA*WLDGGVEPLTP
Trigger: AGGTGTCAGAGGCTCAACTCCTCCATCTAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR CAA 90 bp CCTGCTTTGGATCAAGGTGGCCCCCGATGTGGGAAGCCAGAGGTGCTTGCTGGGCTGACTGTGCCTAACTaGCCAGATCATGGGTCAGGG +
Preference number: 3 (lower is better)
Translates to: PALDQGGPRCGKPEVLAGLTVPN*PDHGSG
Trigger: CCCTGACCCATGATCTGGCAAGTTAGGCACAGTCAG...CCCAGCAAGCACCTCTGGCTTCCCACATCGGGGGCCACCTTGATCCAAAGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR CCA 72 bp GGGTCCTTCTCTGGCAAAGCACCCATGTTTGTGAGGTaGGCACCGCTTAGCAAGGCAGGTGGCTGGCTAGTC +
Preference number: 3 (lower is better)
Translates to: GSFSGKAPMFVR*APLSKAGGWLV
Trigger: GACTAGCCAGCCACCTGCCTTGCTAAGCGGTGCCCACCTCACAAACATGGGTGCTTTGCCAGAGAAGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR-3UTR CAA 90 bp GTCGCTCAGCTCTTCCGAGGACTTGATCCGTCTCAAGATGACTGTCTCCTCCCTGCATTAGTGAACCCCTaGCCCTGGGAGCTCAGCCAG +
Preference number: 3 (lower is better)
Translates to: VAQLFRGLDPSQDDCLLPALVNP*PWELSQ
Trigger: CTGGCTGAGCTCCCAGGGCAAGGGGTTCACTAATGC...AGGGAGGAGACAGTCATCTTGAGACGGATCAAGTCCTCGGAAGAGCTGAGCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR TCA 72 bp GAGCTGAGCAGGAGCAATGGGCTCTCGCTTCTGTCCTaGGGTTCTTGGGTGGTGAGCAAGAGAGCTAAGGGC +
Preference number: 3 (lower is better)
Translates to: ELSRSNGLSLLS*GSWVVSKRAKG
Trigger: GCCCTTAGCTCTCTTGCTCACCACCCAAGAACCTCAGGACAGAAGCGAGAGCCCATTGCTCCTGCTCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
3UTR CCA 72 bp GGACTTCATGAGCTATGGACCCCAGGGGTCCTTCTCTaGCAAAGCACCCATGTTTGTGAGGTGGGCACCGCT +
Preference number: 3 (lower is better)
Translates to: GLHELWTPGVLL*QSTHVCEVGTA
Trigger: AGCGGTGCCCACCTCACAAACATGGGTGCTTTGCCAGAGAAGGACCCCTGGGGTCCATAGCTCATGAAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR CCA 72 bp CGCCAGCCCTGCTTTGGATCAAGGTGGCCCCCGATGTaGGAAGCCAGAGGTGCTTGCTGGGAATGTATAGAT +
Preference number: 3 (lower is better)
Translates to: RQPCFGSRWPPM*EARGACWECID
Trigger: ATCTATACATTCCCAGCAAGCACCTCTGGCTTCCCACATCGGGGGCCACCTTGATCCAAAGCAGGGCTGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR-3UTR CAA 90 bp TGTCTCCTCCCTCTTCGGCCTAGGACTTTCTTGAAGGAAAAGAGCTGTAGTGGTGACAGGCAGCAGGTATaGGAAGGTGATGGCCAGGTC +
Preference number: 3 (lower is better)
Translates to: CLLPLRPRTFLKEKSCSGDRQQV*EGDGQV
Trigger: GACCTGGCCATCACCTTCCAATACCTGCTGCCTGTC...ACCACTACAGCTCTTTTCCTTCAAGAAAGTCCTAGGCCGAAGAGGGAGGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR GCA 72 bp TCAAGGTGGCCCCCGATGTGGGAAGCCAGAGGTGCTTaGTGGGAATGTATAGATATGTTTGGACTTCATGAG +
Preference number: 3 (lower is better)
Translates to: SRWPPMWEARGA*WECIDMFGLHE
Trigger: CTCATGAAGTCCAAACATATCTATACATTCCCAGCAAGCACCTCTGGCTTCCCACATCGGGGGCCACCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR GCA 72 bp TGGATCAAGGTGGCCCCCGATGTGGGAAGCCAGAGGTaGTTGCTGGGAATGTATAGATATGTTTGGACTTCA +
Preference number: 3 (lower is better)
Translates to: WIKVAPDVGSQR*LLGMYRYVWTS
Trigger: TGAAGTCCAAACATATCTATACATTCCCAGCAAGCACCTCTGGCTTCCCACATCGGGGGCCACCTTGATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR-3UTR CAA 90 bp ATCTTTTCCTCATGGATCAACTGTCCATGTCTGACTGTGCCTAACTTGCCAGATGACAGGCAGCAGGTATaGGAAGGTGATGGCCAGGTC +
Preference number: 3 (lower is better)
Translates to: IFSSWINCPCLTVPNLPDDRQQV*EGDGQV
Trigger: GACCTGGCCATCACCTTCCAATACCTGCTGCCTGTC...ATCTGGCAAGTTAGGCACAGTCAGACATGGACAGTTGATCCATGAGGAAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR TCA 72 bp AGAGCATCTTTTCCTCATGGATCAACTGTCCATGTCTaGCTGTGCCTAACTTGCCAGATCATGGGTCAGGGA +
Preference number: 3 (lower is better)
Translates to: RASFPHGSTVHV*LCLTCQIMGQG
Trigger: TCCCTGACCCATGATCTGGCAAGTTAGGCACAGTCAGACATGGACAGTTGATCCATGAGGAAAAGATGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
3UTR-3UTR CAA 90 bp TGGGAAGCCAGAGGTGCTTGCTGGGAATGTATAGATATGTTTGGACTTCATGAGCTCTCATCTCCTAACTaGCTAGGGACTGCCAGTCAA +
Preference number: 3 (lower is better)
Translates to: WEARGACWECIDMFGLHELSSPN*LGTASQ
Trigger: TTGACTGGCAGTCCCTAGCAAGTTAGGAGATGAGAG...CTCATGAAGTCCAAACATATCTATACATTCCCAGCAAGCACCTCTGGCTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR-3UTR CAA 90 bp TGGGAAGCCAGAGGTGCTTGCTGGGAATGTATAGATATGTTTGGACTTCATGAGCGGCCTAGGACTTTCTaGAAGGAAAAGAGCTGTAGT +
Preference number: 3 (lower is better)
Translates to: WEARGACWECIDMFGLHERPRTF*KEKSCS
Trigger: ACTACAGCTCTTTTCCTTCAAGAAAGTCCTAGGCCG...CTCATGAAGTCCAAACATATCTATACATTCCCAGCAAGCACCTCTGGCTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CCA 90 bp ACACCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCTCCTCGTCGCGGGGCTaGGGCTCCTCCCCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: TPPGSACQGFLRSRAELSSSSRG*GSSPCG
Trigger: CCCACAGGGGGAGGAGCCCCAGCCCCGCGACGAGGA...GCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGGTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532830.5
CDS-3UTR TCA 90 bp CCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGAGCCCTCCGCAGCCGGGCTaGGCTGAGCAGGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: PGSACQGFLRSRAELSRSPPQPG*AEQEQW
Trigger: CCATTGCTCCTGCTCAGCTCAGCCCGGCTGCGGAGG...GCTCCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
CDS-3UTR TCA 90 bp CCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGCCTCCGCAGCCGGGCTaGGCTGAGCAGGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: PPGSACQGFLRSRAELSRPPQPG*AEQEQW
Trigger: CCATTGCTCCTGCTCAGCTCAGCCCGGCTGCGGAGG...CCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CCA 90 bp CCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGCGGGGGTCTCCGGGGTaGGTCTTCAGCACCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PPGSACQGFLRSRAELSRRGSPG*VFSTCH
Trigger: GTGGCAGGTGCTGAAGACCCACCCCGGAGACCCCCG...CCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
CDS-3UTR GCA 90 bp AAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGAGCTCCCCCTTGCTGTaGCCAGCGGGCCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: KHSASAAQALPGTLGACWSSPLL*PAGPSL
Trigger: GAGGGAGGGGCCCGCTGGGCACAGCAAGGGGGAGCT...CCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312419.8
ENST00000530584.5
ENST00000539074.1
CDS-3UTR GCA 90 bp ACACCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCGCCCGACACCAGCGCTaGAGCCGTGTGATCCCGGTG +
Preference number: 4 (lower is better)
Translates to: TPPGSACQGFLRSRAELSARHQR*SRVIPV
Trigger: CACCGGGATCACACGGCTGCAGCGCTGGTGTCGGGC...GCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
CDS-3UTR GCA 90 bp CCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGAGCGGCTCCAAGCCCATCTaGTTGGCCCGACACCAGCGC +
Preference number: 4 (lower is better)
Translates to: PGSACQGFLRSRAELSRSGSKPI*LARHQR
Trigger: GCGCTGGTGTCGGGCCAAGCAGATGGGCTTGGAGCC...GCTCCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
CDS-3UTR GCA 90 bp CCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGGCGGTCTCAGCTCACTaGCAGCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: PPGSACQGFLRSRAELSRAVSAH*QLCLPG
Trigger: ACCCGGGAGGCAGAGCTGGCAGTGAGCTGAGACCGC...CCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CCA 90 bp AGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGCCGCTTCCGGCCCATaGCGGCCACCCAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RSTLLQLRRLFRGLWEPAAASGP*RPPRQA
Trigger: TGCCTGCCTGGGTGGCCGCCATGGGCCGGAAGCGGC...AGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312419.8
ENST00000530584.5
ENST00000539074.1
CDS-3UTR CCA 90 bp AGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTTCCTCGTCGCGGGGCTaGGGCTCCTCCCCTAGCTCG +
Preference number: 4 (lower is better)
Translates to: STLLQLRRLFRGLWEPAGSSSRG*GSSPSS
Trigger: CGAGCTAGGGGAGGAGCCCCAGCCCCGCGACGAGGA...ACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000539074.1
CDS-3UTR CCA 90 bp ACACCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCCGGGGGTCTCCGGGGTaGGTCTTCAGCACCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TPPGSACQGFLRSRAELSRGSPG*VFSTCH
Trigger: GTGGCAGGTGCTGAAGACCCACCCCGGAGACCCCCG...GCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
CDS-3UTR CCA 90 bp CCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGTGCCAGAGACTGCACTaGAAGCGGGGGTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: PPGSACQGFLRSRAELSRCQRLH*KRGSPG
Trigger: CCCCGGAGACCCCCGCTTCCAGTGCAGTCTCTGGCA...CCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
CDS-3UTR GCA 90 bp AGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGTGCCAGCTCCCCCTTaGTGTGCCCAGCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: RSTLLQLRRLFRGLWEPAVPAPP*CAQRAP
Trigger: AGGGGCCCGCTGGGCACAGCAAGGGGGAGCTGGCAC...AGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312419.8
ENST00000530584.5
ENST00000539074.1
CDS-3UTR GCA 90 bp CCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGGTGCAGGGCCCGTACTaGCAGGCCAGGTCAAACTGC +
Preference number: 4 (lower is better)
Translates to: PPGSACQGFLRSRAELSRVQGPY*QARSNC
Trigger: GCAGTTTGACCTGGCCTGGCAGTACGGGCCCTGCAC...CCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp CCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGTGGGTCTTCAGCACCTaGCACACCTCTGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: PPGSACQGFLRSRAELSRWVFST*HTSGGG
Trigger: GCCTCCCCCAGAGGTGTGGCAGGTGCTGAAGACCCA...CCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
CDS-3UTR GCA 90 bp CCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGCCTCCAGGTTCTGCCTaGCAAGGGTTCCTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PPGSACQGFLRSRAELSRPPGSA*QGFLRS
Trigger: GCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG...CCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp CCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGAGCCCTCCAGGTTCTGCCTaGCAAGGGTTCCTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PGSACQGFLRSRAELSRSPPGSA*QGFLRS
Trigger: GCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG...GCTCCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
CDS-3UTR TCA 90 bp CTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTTAGACCTCCGCAGCCGGGCTaGGCTGAGCAGGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: LCFSCAGSSGDSGSLLVRPPQPG*AEQEQW
Trigger: CCATTGCTCCTGCTCAGCTCAGCCCGGCTGCGGAGG...TCTAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp TCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTAGCTCCCCCTTGCTGTaGCCAGCGGGCCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SRSTLLQLRRLFRGLWEPSSPLL*PAGPSL
Trigger: GAGGGAGGGGCCCGCTGGGCACAGCAAGGGGGAGCT...AGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312419.8
ENST00000530584.5
ENST00000539074.1
CDS-3UTR GCA 90 bp CCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGCAGGCCAGGTCAAACTaGCTCAGCAGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PPGSACQGFLRSRAELSRQARSN*LSSSSS
Trigger: GGAGCTGGAGCTGCTGAGGCAGTTTGACCTGGCCTG...CCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp TCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTTAGATGGAGGAGCCCGACACCAGCGCTaGAGCCGTGTGATCCCGGTG +
Preference number: 4 (lower is better)
Translates to: SAAQALPGTLGACWLDGGARHQR*SRVIPV
Trigger: CACCGGGATCACACGGCTGCAGCGCTGGTGTCGGGC...TCCTCCATCTAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR GCA 90 bp CTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTTAGAGCCCGACACCAGCGCTaGAGCCGTGTGATCCCGGTG +
Preference number: 4 (lower is better)
Translates to: LCFSCAGSSGDSGSLLVRARHQR*SRVIPV
Trigger: CACCGGGATCACACGGCTGCAGCGCTGGTGTCGGGC...TCTAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR GCA 90 bp ACACCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCCCTCCAGGTTCTGCCTaGCAAGGGTTCCTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: TPPGSACQGFLRSRAELSPPGSA*QGFLRS
Trigger: GCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG...GCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp CCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGGACACCTCCAGGTTCTaGCTGCCAAGGGTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: PPGSACQGFLRSRAELSRDTSRF*LPRVPP
Trigger: CGGAGGAACCCTTGGCAGGCAGAACCTGGAGGTGTC...CCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CCA 90 bp ACACCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCGGAGAGACCGGCCAGTaGGCGCGAGAAAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: TPPGSACQGFLRSRAELSGETGQ*ARERQL
Trigger: CAGCTGTCTTTCTCGCGCCCACTGGCCGGTCTCTCC...GCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000530584.5
ENST00000531239.2
ENST00000539074.1
CDS-3UTR CCA 90 bp TTGCCCTGGGAGCTCAGCCAGTCCTGCTCTCAGATTCCTGGCCTTAGGTGGGAGTCCTCGTCGCGGGGCTaGGGCTCCTCCCCTAGCTCG +
Preference number: 4 (lower is better)
Translates to: LPWELSQSCSQIPGLRWESSSRG*GSSPSS
Trigger: CGAGCTAGGGGAGGAGCCCCAGCCCCGCGACGAGGA...CTCCCACCTAAGGCCAGGAATCTGAGAGCAGGACTGGCTGAGCTCCCAGGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312419.8
CDS-3UTR TCA 90 bp TTGCCCTGGGAGCTCAGCCAGTCCTGCTCTCAGATTCCTGGCCTTAGGTGGGAGCCTCCGCAGCCGGGCTaGGCTGAGCAGGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: LPWELSQSCSQIPGLRWEPPQPG*AEQEQW
Trigger: CCATTGCTCCTGCTCAGCTCAGCCCGGCTGCGGAGG...CTCCCACCTAAGGCCAGGAATCTGAGAGCAGGACTGGCTGAGCTCCCAGGGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR GCA 90 bp GCTGAGCAGGAGCAATGGGCTCTCGCTTCTGTCCTGAGGTTCTTGGGTGGTGAGGTGCCAGCTCCCCCTTaGTGTGCCCAGCGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: AEQEQWALASVLRFLGGEVPAPP*CAQRAP
Trigger: AGGGGCCCGCTGGGCACAGCAAGGGGGAGCTGGCAC...CTCACCACCCAAGAACCTCAGGACAGAAGCGAGAGCCCATTGCTCCTGCTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312419.8
ENST00000530584.5
ENST00000539074.1
CDS-3UTR GCA 90 bp GAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTGCAGGGCCCGTACTaGCAGGCCAGGTCAAACTGC +
Preference number: 4 (lower is better)
Translates to: EALCFSCAGSSGDSGSLLVQGPY*QARSNC
Trigger: GCAGTTTGACCTGGCCTGGCAGTACGGGCCCTGCAC...CAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp GAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGCCTCCAGGTTCTGCCTaGCAAGGGTTCCTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: EALCFSCAGSSGDSGSLLPPGSA*QGFLRS
Trigger: GCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG...CAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp GAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGACCCTCGCCAGCCCTaGTTTGGATCAAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: EALCFSCAGSSGDSGSLLDPRQP*FGSRWP
Trigger: GGGCCACCTTGATCCAAAGCAGGGCTGGCGAGGGTC...CAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp AGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGCGGTCTCAGCTCACTaGCAGCTCTGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: RSTLLQLRRLFRGLWEPAAVSAH*QLCLPG
Trigger: ACCCGGGAGGCAGAGCTGGCAGTGAGCTGAGACCGC...AGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp AAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGAGATGCCAGAGACGGTaGAGGGCCCGTACTGCCAGG +
Preference number: 4 (lower is better)
Translates to: KHSASAAQALPGTLGACWRCQRR*RARTAR
Trigger: CCTGGCAGTACGGGCCCTGCACCGTCTCTGGCATCT...CCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539074.1
CDS-3UTR CCA 90 bp TCCTGCAAGTTGAGACCCTCGCCAGCCCTGCTTTGGATCAAGGTGGCCCCCGATCGGGGGTCTCCGGGGTaGGTCTTCAGCACCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SCKLRPSPALLWIKVAPDRGSPG*VFSTCH
Trigger: GTGGCAGGTGCTGAAGACCCACCCCGGAGACCCCCG...ATCGGGGGCCACCTTGATCCAAAGCAGGGCTGGCGAGGGTCTCAACTTGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CCA 90 bp ACACCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCGGGCTCCTCCCCCTGTaGGCCAGAATTCTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: TPPGSACQGFLRSRAELSGLLPL*ARILSG
Trigger: GCCTGAAAGAATTCTGGCCCACAGGGGGAGGAGCCC...GCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532830.5
CDS-3UTR TCA 90 bp ACCACTCTCCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACCCTCCGCAGCCGGGCTaGGCTGAGCAGGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: TTLHLEALCFSCAGSSGDPPQPG*AEQEQW
Trigger: CCATTGCTCCTGCTCAGCTCAGCCCGGCTGCGGAGG...GTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGGAGAGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR TCA 90 bp CCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGAGCGTTAGATGGAGGAGTTaGGCCTCTGACACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PGSACQGFLRSRAELSRSVRWRS*ASDTSR
Trigger: CCTGGAGGTGTCAGAGGCTCAACTCCTCCATCTAAC...GCTCCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
CDS-3UTR TCA 90 bp CCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGGTTAGATGGAGGAGTTaGGCCTCTGACACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PPGSACQGFLRSRAELSRVRWRS*ASDTSR
Trigger: CCTGGAGGTGTCAGAGGCTCAACTCCTCCATCTAAC...CCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp TCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGGCTCCAAGCCCATCTaGTTGGCCCGACACCAGCGC +
Preference number: 4 (lower is better)
Translates to: SRSTLLQLRRLFRGLWEPGSKPI*LARHQR
Trigger: GCGCTGGTGTCGGGCCAAGCAGATGGGCTTGGAGCC...AGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR GCA 90 bp CCTGCTTTGGATCAAGGTGGCCCCCGATGTGGGAAGCCAGAGGTGCTTGCTGGGCCTCCAGGTTCTGCCTaGCAAGGGTTCCTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PALDQGGPRCGKPEVLAGPPGSA*QGFLRS
Trigger: GCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG...CCCAGCAAGCACCTCTGGCTTCCCACATCGGGGGCCACCTTGATCCAAAGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp CCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGGGGACTCTGGGAGCCTaGTGGTTAGATGGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: PPGSACQGFLRSRAELSRGTLGA*WLDGGV
Trigger: AACTCCTCCATCTAACCAGCAGGCTCCCAGAGTCCC...CCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp CTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTTAGAGACCCTCGCCAGCCCTaGTTTGGATCAAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LCFSCAGSSGDSGSLLVRDPRQP*FGSRWP
Trigger: GGGCCACCTTGATCCAAAGCAGGGCTGGCGAGGGTC...TCTAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp CACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTTAGCTCACTGCCAGCTCTaGCTCCCGGGTTCACGCCAT +
Preference number: 4 (lower is better)
Translates to: HSASAAQALPGTLGACWLAHCQL*LPGSRH
Trigger: ATGGCGTGAACCCGGGAGGCAGAGCTGGCAGTGAGC...TAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CCA 90 bp TCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTTGCCAGAGACTGCACTaGAAGCGGGGGTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: SRSTLLQLRRLFRGLWEPCQRLH*KRGSPG
Trigger: CCCCGGAGACCCCCGCTTCCAGTGCAGTCTCTGGCA...AGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR CCA 90 bp ACACCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCGCTGAGCAGGAGCAATaGGCTCTCGCTTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TPPGSACQGFLRSRAELSAEQEQ*ALASVL
Trigger: CAGGACAGAAGCGAGAGCCCATTGCTCCTGCTCAGC...GCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
CDS-3UTR TCA 90 bp CCTGCTTTGGATCAAGGTGGCCCCCGATGTGGGAAGCCAGAGGTGCTTGCTGGGCCTGCCTCAGCCTCCTaGGTAGCTGGGACTACACCT +
Preference number: 4 (lower is better)
Translates to: PALDQGGPRCGKPEVLAGPASAS*VAGTTP
Trigger: AGGTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGG...CCCAGCAAGCACCTCTGGCTTCCCACATCGGGGGCCACCTTGATCCAAAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp CACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTTACAGGCCAGGTCAAACTaGCTCAGCAGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HSASAAQALPGTLGACWLQARSN*LSSSSS
Trigger: GGAGCTGGAGCTGCTGAGGCAGTTTGACCTGGCCTG...TAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp CTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTTAGACAGGCCAGGTCAAACTaGCTCAGCAGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LCFSCAGSSGDSGSLLVRQARSN*LSSSSS
Trigger: GGAGCTGGAGCTGCTGAGGCAGTTTGACCTGGCCTG...TCTAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp TCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTTGGGTCTTCAGCACCTaGCACACCTCTGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SRSTLLQLRRLFRGLWEPWVFST*HTSGGG
Trigger: GCCTCCCCCAGAGGTGTGGCAGGTGCTGAAGACCCA...AGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR GCA 90 bp CACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTTAGACACCTCCAGGTTCTaGCTGCCAAGGGTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: HSASAAQALPGTLGACWLDTSRF*LPRVPP
Trigger: CGGAGGAACCCTTGGCAGGCAGAACCTGGAGGTGTC...TAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp CTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTTAGAGACACCTCCAGGTTCTaGCTGCCAAGGGTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: LCFSCAGSSGDSGSLLVRDTSRF*LPRVPP
Trigger: CGGAGGAACCCTTGGCAGGCAGAACCTGGAGGTGTC...TCTAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CCA 90 bp ACTCTCCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTCGGGGGTCTCCGGGGTaGGTCTTCAGCACCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TLHLEALCFSCAGSSGDSRGSPG*VFSTCH
Trigger: GTGGCAGGTGCTGAAGACCCACCCCGGAGACCCCCG...AGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGGAGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR CCA 90 bp ACCACTCTCCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTGCCAGAGACTGCACTaGAAGCGGGGGTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: TTLHLEALCFSCAGSSGDCQRLH*KRGSPG
Trigger: CCCCGGAGACCCCCGCTTCCAGTGCAGTCTCTGGCA...GTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGGAGAGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR CCA 90 bp CCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGAGCGCAGGAGGTCTTACGTaGTGCCTCATAGGGGATAGA +
Preference number: 4 (lower is better)
Translates to: PGSACQGFLRSRAELSRSAGGLT*CLIGDR
Trigger: TCTATCCCCTATGAGGCACCACGTAAGACCTCCTGC...GCTCCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CCA 90 bp CCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGAGCACTCTGGGAGCCTGCTaGTTAGATGGAGGAGTTGAG +
Preference number: 4 (lower is better)
Translates to: PGSACQGFLRSRAELSRSTLGAC*LDGGVE
Trigger: CTCAACTCCTCCATCTAACCAGCAGGCTCCCAGAGT...GCTCCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CCA 90 bp CCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGACTCTGGGAGCCTGCTaGTTAGATGGAGGAGTTGAG +
Preference number: 4 (lower is better)
Translates to: PPGSACQGFLRSRAELSRTLGAC*LDGGVE
Trigger: CTCAACTCCTCCATCTAACCAGCAGGCTCCCAGAGT...CCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CCA 90 bp CCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGCAGGTAGGTTTTCCCTaGCTGCTCCAGAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: PPGSACQGFLRSRAELSRQVGFP*LLQKVS
Trigger: ACTCACCTTCTGGAGCAGCCAGGGAAAACCTACCTG...CCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR CAA 72 bp CAGGTCCTGCAAGTTGAGACCCTCGCCAGCCCTGCTTaGGATCAAGGTGGCCCCCGATGTGGGAAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: QVLQVETLASPA*DQGGPRCGKPE
Trigger: CTCTGGCTTCCCACATCGGGGGCCACCTTGATCCAAAGCAGGGCTGGCGAGGGTCTCAACTTGCAGGACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR TCA 90 bp CACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTTACTCTCGCTTCTGTCCTaGGGTTCTTGGGTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: HSASAAQALPGTLGACWLLSLLS*GSWVVS
Trigger: GCTCACCACCCAAGAACCTCAGGACAGAAGCGAGAG...TAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR TCA 90 bp AGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTGCAGGTATTGGAAGGTaGTGGCCAGGTCCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: STLLQLRRLFRGLWEPAGAGIGR*WPGPFP
Trigger: GGGAAAAGGACCTGGCCATCACCTTCCAATACCTGC...ACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR TCA 90 bp CACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTTAATGGTCTCGATCTCTTaGCCTCGTGATCCGCCCTCC +
Preference number: 4 (lower is better)
Translates to: HSASAAQALPGTLGACWLMVSIS*PRDPPS
Trigger: GGAGGGCGGATCACGAGGTCAAGAGATCGAGACCAT...TAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp TCCTGCAAGTTGAGACCCTCGCCAGCCCTGCTTTGGATCAAGGTGGCCCCCGATCAGGCCAGGTCAAACTaGCTCAGCAGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SCKLRPSPALLWIKVAPDQARSN*LSSSSS
Trigger: GGAGCTGGAGCTGCTGAGGCAGTTTGACCTGGCCTG...ATCGGGGGCCACCTTGATCCAAAGCAGGGCTGGCGAGGGTCTCAACTTGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp TTGCCCTGGGAGCTCAGCCAGTCCTGCTCTCAGATTCCTGGCCTTAGGTGGGAGCAGGCCAGGTCAAACTaGCTCAGCAGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LPWELSQSCSQIPGLRWEQARSN*LSSSSS
Trigger: GGAGCTGGAGCTGCTGAGGCAGTTTGACCTGGCCTG...CTCCCACCTAAGGCCAGGAATCTGAGAGCAGGACTGGCTGAGCTCCCAGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR GCA 90 bp GAGGTCGCTCAGCTCTTCCGAGGACTTGATCCGTCTCAAGATGACTGTCTCCTCGCCCGACACCAGCGCTaGAGCCGTGTGATCCCGGTG +
Preference number: 4 (lower is better)
Translates to: EVAQLFRGLDPSQDDCLLARHQR*SRVIPV
Trigger: CACCGGGATCACACGGCTGCAGCGCTGGTGTCGGGC...GAGGAGACAGTCATCTTGAGACGGATCAAGTCCTCGGAAGAGCTGAGCGACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp AAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGGGGACTCTGGGAGCCTaGTGGTTAGATGGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: KHSASAAQALPGTLGACWGTLGA*WLDGGV
Trigger: AACTCCTCCATCTAACCAGCAGGCTCCCAGAGTCCC...CCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp GCTGAGCAGGAGCAATGGGCTCTCGCTTCTGTCCTGAGGTTCTTGGGTGGTGAGGCACTCTGCTTCAGCTaGGCAGGCTCTTCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: AEQEQWALASVLRFLGGEALCFS*AGSSGD
Trigger: GTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGC...CTCACCACCCAAGAACCTCAGGACAGAAGCGAGAGCCCATTGCTCCTGCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp CCTCGCCAGCCCTGCTTTGGATCAAGGTGGCCCCCGATGTGGGAAGCCAGAGGTTGTCTGAGCAGGTCCTaGAAGTTGAGACCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: PRQPCFGSRWPPMWEARGCLSRS*KLRPSP
Trigger: TGGCGAGGGTCTCAACTTGCAGGACCTGCTCAGACA...ACCTCTGGCTTCCCACATCGGGGGCCACCTTGATCCAAAGCAGGGCTGGCGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp AAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTGTCTGAGCAGGTCCTaGAAGTTGAGACCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: KHSASAAQALPGTLGACWCLSRS*KLRPSP
Trigger: TGGCGAGGGTCTCAACTTGCAGGACCTGCTCAGACA...CCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp CCTGCTTTGGATCAAGGTGGCCCCCGATGTGGGAAGCCAGAGGTGCTTGCTGGGTCACCCAGGCTGGAGTaGAGTGATGCGGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PALDQGGPRCGKPEVLAGSPRLE*SDAVSA
Trigger: AGCTGAGACCGCATCACTGCACTCCAGCCTGGGTGA...CCCAGCAAGCACCTCTGGCTTCCCACATCGGGGGCCACCTTGATCCAAAGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CCA 90 bp GCTGAGCAGGAGCAATGGGCTCTCGCTTCTGTCCTGAGGTTCTTGGGTGGTGAGGGAGAGACCGGCCAGTaGGCGCGAGAAAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: AEQEQWALASVLRFLGGEGETGQ*ARERQL
Trigger: CAGCTGTCTTTCTCGCGCCCACTGGCCGGTCTCTCC...CTCACCACCCAAGAACCTCAGGACAGAAGCGAGAGCCCATTGCTCCTGCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000530584.5
ENST00000531239.2
ENST00000539074.1
CDS-3UTR CCA 90 bp ACACCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCGCAGGAGGTCTTACGTaGTGCCTCATAGGGGATAGA +
Preference number: 4 (lower is better)
Translates to: TPPGSACQGFLRSRAELSAGGLT*CLIGDR
Trigger: TCTATCCCCTATGAGGCACCACGTAAGACCTCCTGC...GCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CCA 90 bp TCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTTAGATGGAGGAGCTGAGCAGGAGCAATaGGCTCTCGCTTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SAAQALPGTLGACWLDGGAEQEQ*ALASVL
Trigger: CAGGACAGAAGCGAGAGCCCATTGCTCCTGCTCAGC...TCCTCCATCTAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CCA 90 bp AGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTCCCATGTTTGTGAGGTaGGCACCGCTTAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: STLLQLRRLFRGLWEPAGPMFVR*APLSKA
Trigger: TGCCTTGCTAAGCGGTGCCCACCTCACAAACATGGG...ACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR TCA 90 bp TCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGAGAAAGACAGCTGCTaGGAGAGACAGACGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SRSTLLQLRRLFRGLWEPEKDSC*ERQTGP
Trigger: TGGCCCCGTCTGTCTCTCTCAGCAGCTGTCTTTCTC...AGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312419.8
ENST00000530584.5
ENST00000539074.1
CDS-3UTR TCA 90 bp CTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTTAGAGTTAGATGGAGGAGTTaGGCCTCTGACACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LCFSCAGSSGDSGSLLVRVRWRS*ASDTSR
Trigger: CCTGGAGGTGTCAGAGGCTCAACTCCTCCATCTAAC...TCTAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR TCA 90 bp CACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTTAGTTAGATGGAGGAGTTaGGCCTCTGACACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: HSASAAQALPGTLGACWLVRWRS*ASDTSR
Trigger: CCTGGAGGTGTCAGAGGCTCAACTCCTCCATCTAAC...TAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR TCA 90 bp GAGGTCGCTCAGCTCTTCCGAGGACTTGATCCGTCTCAAGATGACTGTCTCCTCGCAGGTCCTGCAAGTTaGGACCCTCGCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: EVAQLFRGLDPSQDDCLLAGPAS*DPRQPC
Trigger: GCAGGGCTGGCGAGGGTCTCAACTTGCAGGACCTGC...GAGGAGACAGTCATCTTGAGACGGATCAAGTCCTCGGAAGAGCTGAGCGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp CTGTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCAGGTATTGGAAGCCCGACACCAGCGCTaGAGCCGTGTGATCCCGGTG +
Preference number: 4 (lower is better)
Translates to: LCLTCQIMGQGDRQQVLEARHQR*SRVIPV
Trigger: CACCGGGATCACACGGCTGCAGCGCTGGTGTCGGGC...TTCCAATACCTGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR GCA 90 bp ACTCTCCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTTGGGTCTTCAGCACCTaGCACACCTCTGGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: TLHLEALCFSCAGSSGDSWVFST*HTSGGG
Trigger: GCCTCCCCCAGAGGTGTGGCAGGTGCTGAAGACCCA...AGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGGAGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR GCA 90 bp ACACCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCGGAGGTCTTACGTGGTaGCTCATAGGGGATAGAGAT +
Preference number: 4 (lower is better)
Translates to: TPPGSACQGFLRSRAELSGGLTW*LIGDRD
Trigger: ATCTCTATCCCCTATGAGGCACCACGTAAGACCTCC...GCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp GCTGAGCAGGAGCAATGGGCTCTCGCTTCTGTCCTGAGGTTCTTGGGTGGTGAGGACACCTCCAGGTTCTaGCTGCCAAGGGTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: AEQEQWALASVLRFLGGEDTSRF*LPRVPP
Trigger: CGGAGGAACCCTTGGCAGGCAGAACCTGGAGGTGTC...CTCACCACCCAAGAACCTCAGGACAGAAGCGAGAGCCCATTGCTCCTGCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp AGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGGACTCTGGGAGCCTaGTGGTTAGATGGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: RSTLLQLRRLFRGLWEPAGTLGA*WLDGGV
Trigger: AACTCCTCCATCTAACCAGCAGGCTCCCAGAGTCCC...AGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp GAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGCATCTAGAAGCACTCTaGTTCAGCTGCGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: EALCFSCAGSSGDSGSLLHLEAL*FSCAGS
Trigger: AGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATG...CAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CCA 90 bp ACTCTCCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGAGAGACCGGCCAGTaGGCGCGAGAAAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: TLHLEALCFSCAGSSGDSGETGQ*ARERQL
Trigger: CAGCTGTCTTTCTCGCGCCCACTGGCCGGTCTCTCC...AGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGGAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312419.8
ENST00000530584.5
ENST00000539074.1
CDS-3UTR CCA 90 bp GTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCAGGTATTGGAAGGTGCCAGAGACTGCACTaGAAGCGGGGGTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: VPNLPDHGSGRQAAGIGRCQRLH*KRGSPG
Trigger: CCCCGGAGACCCCCGCTTCCAGTGCAGTCTCTGGCA...CCTTCCAATACCTGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR CCA 90 bp TCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGAGCAGGAGCAATaGGCTCTCGCTTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SRSTLLQLRRLFRGLWEPAEQEQ*ALASVL
Trigger: CAGGACAGAAGCGAGAGCCCATTGCTCCTGCTCAGC...AGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CCA 90 bp CCTCGCCAGCCCTGCTTTGGATCAAGGTGGCCCCCGATGTGGGAAGCCAGAGGTCAGGTAGGTTTTCCCTaGCTGCTCCAGAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: PRQPCFGSRWPPMWEARGQVGFP*LLQKVS
Trigger: ACTCACCTTCTGGAGCAGCCAGGGAAAACCTACCTG...ACCTCTGGCTTCCCACATCGGGGGCCACCTTGATCCAAAGCAGGGCTGGCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CCA 90 bp ACCACTCTCCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCGCCAGCCCTGCTTTaGATCAAGGTGGCCCCCGAT +
Preference number: 4 (lower is better)
Translates to: TTLHLEALCFSCAGSSGDSPALL*IKVAPD
Trigger: ATCGGGGGCCACCTTGATCCAAAGCAGGGCTGGCGA...GTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGGAGAGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR TCA 90 bp GCTGAGCAGGAGCAATGGGCTCTCGCTTCTGTCCTGAGGTTCTTGGGTGGTGAGGAGAAAGACAGCTGCTaGGAGAGACAGACGGGGCCA +
Preference number: 4 (lower is better)
Translates to: AEQEQWALASVLRFLGGEEKDSC*ERQTGP
Trigger: TGGCCCCGTCTGTCTCTCTCAGCAGCTGTCTTTCTC...CTCACCACCCAAGAACCTCAGGACAGAAGCGAGAGCCCATTGCTCCTGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000530584.5
ENST00000531239.2
ENST00000539074.1
CDS-3UTR GCA 90 bp TCCTCATGGATCAACTGTCCATGTCTGACTGTGCCTAACTTGCCAGATCATGGGAGCTCCCCCTTGCTGTaGCCAGCGGGCCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SSWINCPCLTVPNLPDHGSSPLL*PAGPSL
Trigger: GAGGGAGGGGCCCGCTGGGCACAGCAAGGGGGAGCT...CCCATGATCTGGCAAGTTAGGCACAGTCAGACATGGACAGTTGATCCATGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312419.8
ENST00000530584.5
ENST00000539074.1
CDS-3UTR GCA 90 bp CCATGTCTGACTGTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCAGTGCAGGGCCCGTACTaGCAGGCCAGGTCAAACTGC +
Preference number: 4 (lower is better)
Translates to: PCLTVPNLPDHGSGRQAAVQGPY*QARSNC
Trigger: GCAGTTTGACCTGGCCTGGCAGTACGGGCCCTGCAC...TGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCACAGTCAGACATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp TTGCCCTGGGAGCTCAGCCAGTCCTGCTCTCAGATTCCTGGCCTTAGGTGGGAGGGGACTCTGGGAGCCTaGTGGTTAGATGGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: LPWELSQSCSQIPGLRWEGTLGA*WLDGGV
Trigger: AACTCCTCCATCTAACCAGCAGGCTCCCAGAGTCCC...CTCCCACCTAAGGCCAGGAATCTGAGAGCAGGACTGGCTGAGCTCCCAGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR GCA 90 bp CCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGTTCCTAGTCCCTCACTaGCTTCCCAGACACTCCCTC +
Preference number: 4 (lower is better)
Translates to: PSRSTLLQLRRLFRGLWEFLVPH*LPRHSL
Trigger: GAGGGAGTGTCTGGGAAGGCAGTGAGGGACTAGGAA...CTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532830.5
CDS-3UTR CCA 90 bp AGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTACTCTGGGAGCCTGCTaGTTAGATGGAGGAGTTGAG +
Preference number: 4 (lower is better)
Translates to: RSTLLQLRRLFRGLWEPATLGAC*LDGGVE
Trigger: CTCAACTCCTCCATCTAACCAGCAGGCTCCCAGAGT...AGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CCA 90 bp TCCTGCAAGTTGAGACCCTCGCCAGCCCTGCTTTGGATCAAGGTGGCCCCCGATCCCATGTTTGTGAGGTaGGCACCGCTTAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: SCKLRPSPALLWIKVAPDPMFVR*APLSKA
Trigger: TGCCTTGCTAAGCGGTGCCCACCTCACAAACATGGG...ATCGGGGGCCACCTTGATCCAAAGCAGGGCTGGCGAGGGTCTCAACTTGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CCA 90 bp CTGAGCAGGTCCTGCAAGTTGAGACCCTCGCCAGCCCTGCTTTGGATCAAGGTGTGCTTTGGATCAAGGTaGCCCCCGATGTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: LSRSCKLRPSPALLWIKVCFGSR*PPMWEA
Trigger: GGCTTCCCACATCGGGGGCCACCTTGATCCAAAGCA...CACCTTGATCCAAAGCAGGGCTGGCGAGGGTCTCAACTTGCAGGACCTGCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CCA 90 bp CCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGAAAGGATGGGGTCTCTaGGTTTTTCTACCACTGCAT +
Preference number: 4 (lower is better)
Translates to: PPGSACQGFLRSRAELSRKGWGL*VFLPLH
Trigger: ATGCAGTGGTAGAAAAACCCAGAGACCCCATCCTTT...CCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532830.5
CDS-3UTR CCA 90 bp TTGCCCTGGGAGCTCAGCCAGTCCTGCTCTCAGATTCCTGGCCTTAGGTGGGAGTCGCAGCAGCTTGAGTaGAAAGGATGGGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LPWELSQSCSQIPGLRWESQQLE*KGWGLW
Trigger: CCAGAGACCCCATCCTTTCCACTCAAGCTGCTGCGA...CTCCCACCTAAGGCCAGGAATCTGAGAGCAGGACTGGCTGAGCTCCCAGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532830.5
CDS-3UTR TCA 90 bp ACTCTCCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGCGGGCAGACAAGATaGCCCAGACAAACCGAGAGA +
Preference number: 4 (lower is better)
Translates to: TLHLEALCFSCAGSSGDSGGQTR*PRQTER
Trigger: TCTCTCGGTTTGTCTGGGTCATCTTGTCTGCCCGCC...AGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312419.8
CDS-3UTR TCA 90 bp GCTGAGCAGGAGCAATGGGCTCTCGCTTCTGTCCTGAGGTTCTTGGGTGGTGAGGCAGGTATTGGAAGGTaGTGGCCAGGTCCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: AEQEQWALASVLRFLGGEAGIGR*WPGPFP
Trigger: GGGAAAAGGACCTGGCCATCACCTTCCAATACCTGC...CTCACCACCCAAGAACCTCAGGACAGAAGCGAGAGCCCATTGCTCCTGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR TCA 90 bp CCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGGCCACAGTAAAGGACTaGAGGTCAGGATTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PSRSTLLQLRRLFRGLWEATVKD*RSGFQA
Trigger: AGCCTGGAATCCTGACCTTCAGTCCTTTACTGTGGC...CTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR TCA 90 bp AAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGGGCCTAGGACTTTCTTaGAGGAAAAGAGCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: KHSASAAQALPGTLGACWGLGLS*RKRAVV
Trigger: CACTACAGCTCTTTTCCTTCAAGAAAGTCCTAGGCC...CCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR TCA 90 bp GTCGCTCAGCTCTTCCGAGGACTTGATCCGTCTCAAGATGACTGTCTCCTCCCTCCTGCCTCAGCCTCCTaGGTAGCTGGGACTACACCT +
Preference number: 4 (lower is better)
Translates to: VAQLFRGLDPSQDDCLLPPASAS*VAGTTP
Trigger: AGGTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGG...AGGGAGGAGACAGTCATCTTGAGACGGATCAAGTCCTCGGAAGAGCTGAGCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR TCA 90 bp ACCACTCTCCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCCATCGCAGCAGCTTaGGTGGAAAGGATGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TTLHLEALCFSCAGSSGDSIAAA*VERMGS
Trigger: AGACCCCATCCTTTCCACTCAAGCTGCTGCGATGGA...GTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGGAGAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532830.5
CDS-3UTR GCA 90 bp GTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCAGGTATTGGAAGGCAGGCCAGGTCAAACTaGCTCAGCAGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VPNLPDHGSGRQAAGIGRQARSN*LSSSSS
Trigger: GGAGCTGGAGCTGCTGAGGCAGTTTGACCTGGCCTG...CCTTCCAATACCTGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp CTGTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCAGGTATTGGAAGTGCAGGGCCCGTACTaGCAGGCCAGGTCAAACTGC +
Preference number: 4 (lower is better)
Translates to: LCLTCQIMGQGDRQQVLEVQGPY*QARSNC
Trigger: GCAGTTTGACCTGGCCTGGCAGTACGGGCCCTGCAC...TTCCAATACCTGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp CCTGCTTTGGATCAAGGTGGCCCCCGATGTGGGAAGCCAGAGGTGCTTGCTGGGGGAGGTCTTACGTGGTaGCTCATAGGGGATAGAGAT +
Preference number: 4 (lower is better)
Translates to: PALDQGGPRCGKPEVLAGGGLTW*LIGDRD
Trigger: ATCTCTATCCCCTATGAGGCACCACGTAAGACCTCC...CCCAGCAAGCACCTCTGGCTTCCCACATCGGGGGCCACCTTGATCCAAAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp AGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGAGGTCTTACGTGGTaGCTCATAGGGGATAGAGAT +
Preference number: 4 (lower is better)
Translates to: RSTLLQLRRLFRGLWEPAGGLTW*LIGDRD
Trigger: ATCTCTATCCCCTATGAGGCACCACGTAAGACCTCC...AGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp AGGTCGCTCAGCTCTTCCGAGGACTTGATCCGTCTCAAGATGACTGTCTCCTCCGACACCTCCAGGTTCTaGCTGCCAAGGGTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: RSLSSSEDLIRLKMTVSSDTSRF*LPRVPP
Trigger: CGGAGGAACCCTTGGCAGGCAGAACCTGGAGGTGTC...GGAGGAGACAGTCATCTTGAGACGGATCAAGTCCTCGGAAGAGCTGAGCGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp TCCTGCAAGTTGAGACCCTCGCCAGCCCTGCTTTGGATCAAGGTGGCCCCCGATCATCTAGAAGCACTCTaGTTCAGCTGCGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SCKLRPSPALLWIKVAPDHLEAL*FSCAGS
Trigger: AGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATG...ATCGGGGGCCACCTTGATCCAAAGCAGGGCTGGCGAGGGTCTCAACTTGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp AGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGTGGGAAGCCAGAGGTaGTTGCTGGGAATGTATAGA +
Preference number: 4 (lower is better)
Translates to: RSTLLQLRRLFRGLWEPAVGSQR*LLGMYR
Trigger: TCTATACATTCCCAGCAAGCACCTCTGGCTTCCCAC...AGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CCA 90 bp TTGCCCTGGGAGCTCAGCCAGTCCTGCTCTCAGATTCCTGGCCTTAGGTGGGAGGCAGGAGGTCTTACGTaGTGCCTCATAGGGGATAGA +
Preference number: 4 (lower is better)
Translates to: LPWELSQSCSQIPGLRWEAGGLT*CLIGDR
Trigger: TCTATCCCCTATGAGGCACCACGTAAGACCTCCTGC...CTCCCACCTAAGGCCAGGAATCTGAGAGCAGGACTGGCTGAGCTCCCAGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR CCA 90 bp GAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGATTCCTGGCCTTAGGTaGGAGAGCATCTTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: EALCFSCAGSSGDSGSLLIPGLR*ESIFSS
Trigger: TGAGGAAAAGATGCTCTCCCACCTAAGGCCAGGAAT...CAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CCA 90 bp CTGAGCAGGTCCTGCAAGTTGAGACCCTCGCCAGCCCTGCTTTGGATCAAGGTGGGACTTCATGAGCTATaGACCCCAGGGGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LSRSCKLRPSPALLWIKVGLHEL*TPGVLL
Trigger: GAGAAGGACCCCTGGGGTCCATAGCTCATGAAGTCC...CACCTTGATCCAAAGCAGGGCTGGCGAGGGTCTCAACTTGCAGGACCTGCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CCA 90 bp CCATGTCTGACTGTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCATCGCCAGCCCTGCTTTaGATCAAGGTGGCCCCCGAT +
Preference number: 4 (lower is better)
Translates to: PCLTVPNLPDHGSGRQAASPALL*IKVAPD
Trigger: ATCGGGGGCCACCTTGATCCAAAGCAGGGCTGGCGA...TGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCACAGTCAGACATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR CAA 72 bp AGGGGGCACCAGAGGTCGCTCAGCTCTTCCGAGGACTaGATCCGTCTCAAGATGACTGTCTCCTCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RGHQRSLSSSED*IRLKMTVSSLF
Trigger: GAAGAGGGAGGAGACAGTCATCTTGAGACGGATCAAGTCCTCGGAAGAGCTGAGCGACCTCTGGTGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR TCA 90 bp GAGGTCGCTCAGCTCTTCCGAGGACTTGATCCGTCTCAAGATGACTGTCTCCTCGAGAAAGACAGCTGCTaGGAGAGACAGACGGGGCCA +
Preference number: 4 (lower is better)
Translates to: EVAQLFRGLDPSQDDCLLEKDSC*ERQTGP
Trigger: TGGCCCCGTCTGTCTCTCTCAGCAGCTGTCTTTCTC...GAGGAGACAGTCATCTTGAGACGGATCAAGTCCTCGGAAGAGCTGAGCGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312419.8
CDS-3UTR TCA 90 bp ACTCTCCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGCAGGTATTGGAAGGTaGTGGCCAGGTCCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: TLHLEALCFSCAGSSGDSAGIGR*WPGPFP
Trigger: GGGAAAAGGACCTGGCCATCACCTTCCAATACCTGC...AGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGGAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR TCA 90 bp TGTCTCCTCCCTCTTCGGCCTAGGACTTTCTTGAAGGAAAAGAGCTGTAGTGGTGCAGGTCCTGCAAGTTaGGACCCTCGCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: CLLPLRPRTFLKEKSCSGAGPAS*DPRQPC
Trigger: GCAGGGCTGGCGAGGGTCTCAACTTGCAGGACCTGC...ACCACTACAGCTCTTTTCCTTCAAGAAAGTCCTAGGCCGAAGAGGGAGGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp CTGTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCAGGTATTGGAAGACACCTCCAGGTTCTaGCTGCCAAGGGTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: LCLTCQIMGQGDRQQVLEDTSRF*LPRVPP
Trigger: CGGAGGAACCCTTGGCAGGCAGAACCTGGAGGTGTC...TTCCAATACCTGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp ACTCTCCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGACTCTGGGAGCCTaGTGGTTAGATGGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: TLHLEALCFSCAGSSGDSGTLGA*WLDGGV
Trigger: AACTCCTCCATCTAACCAGCAGGCTCCCAGAGTCCC...AGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGGAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp CTTACCAAAGCCCCTCAGATGATGGTCATGTCTGAGCAGGTCCTGCAAGTTGAGGCACTCTGCTTCAGCTaGGCAGGCTCTTCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: LTKAPQMMVMSEQVLQVEALCFS*AGSSGD
Trigger: GTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGC...CTCAACTTGCAGGACCTGCTCAGACATGACCATCATCTGAGGGGCTTTGGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp CCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGTTCTCTGGCCTAATGTaGTTCCATCGCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PSRSTLLQLRRLFRGLWEFSGLM*FHRSSL
Trigger: CAAGCTGCTGCGATGGAAGCACATTAGGCCAGAGAA...CTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532830.5
CDS-3UTR CCA 90 bp CTGAGCAGGTCCTGCAAGTTGAGACCCTCGCCAGCCCTGCTTTGGATCAAGGTGGCAGGAGGTCTTACGTaGTGCCTCATAGGGGATAGA +
Preference number: 4 (lower is better)
Translates to: LSRSCKLRPSPALLWIKVAGGLT*CLIGDR
Trigger: TCTATCCCCTATGAGGCACCACGTAAGACCTCCTGC...CACCTTGATCCAAAGCAGGGCTGGCGAGGGTCTCAACTTGCAGGACCTGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CCA 90 bp AGGTGGCCCCCGATGTGGGAAGCCAGAGGTGCTTGCTGGGAATGTATAGATATGGCTGAGCAGGAGCAATaGGCTCTCGCTTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: RWPPMWEARGACWECIDMAEQEQ*ALASVL
Trigger: CAGGACAGAAGCGAGAGCCCATTGCTCCTGCTCAGC...CATATCTATACATTCCCAGCAAGCACCTCTGGCTTCCCACATCGGGGGCCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CCA 90 bp AGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTATTCCTGGCCTTAGGTaGGAGAGCATCTTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: RSTLLQLRRLFRGLWEPAIPGLR*ESIFSS
Trigger: TGAGGAAAAGATGCTCTCCCACCTAAGGCCAGGAAT...AGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CCA 90 bp CTGAGCAGGTCCTGCAAGTTGAGACCCTCGCCAGCCCTGCTTTGGATCAAGGTGCCAGGGGTCCTTCTCTaGCAAAGCACCCATGTTTGT +
Preference number: 4 (lower is better)
Translates to: LSRSCKLRPSPALLWIKVPGVLL*QSTHVC
Trigger: ACAAACATGGGTGCTTTGCCAGAGAAGGACCCCTGG...CACCTTGATCCAAAGCAGGGCTGGCGAGGGTCTCAACTTGCAGGACCTGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CCA 90 bp GAGGTCGCTCAGCTCTTCCGAGGACTTGATCCGTCTCAAGATGACTGTCTCCTCTGCTTTGGATCAAGGTaGCCCCCGATGTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: EVAQLFRGLDPSQDDCLLCFGSR*PPMWEA
Trigger: GGCTTCCCACATCGGGGGCCACCTTGATCCAAAGCA...GAGGAGACAGTCATCTTGAGACGGATCAAGTCCTCGGAAGAGCTGAGCGACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CCA 90 bp TCCTGCAAGTTGAGACCCTCGCCAGCCCTGCTTTGGATCAAGGTGGCCCCCGATAGCCTCCTGAGTAGCTaGGACTACACCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: SCKLRPSPALLWIKVAPDSLLSS*DYTWLI
Trigger: AATTAGCCAGGTGTAGTCCCAGCTACTCAGGAGGCT...ATCGGGGGCCACCTTGATCCAAAGCAGGGCTGGCGAGGGTCTCAACTTGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CCA 90 bp ACCACTCTCCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACCTGGTCCAGGTTCTCTaGCCTAATGTGCTTCCATCG +
Preference number: 4 (lower is better)
Translates to: TTLHLEALCFSCAGSSGDLVQVL*PNVLPS
Trigger: CGATGGAAGCACATTAGGCCAGAGAACCTGGACCAG...GTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGGAGAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532830.5
CDS-3UTR TCA 90 bp GTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCAGGTATTGGAAGGGCAGGTATTGGAAGGTaGTGGCCAGGTCCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: VPNLPDHGSGRQAAGIGRAGIGR*WPGPFP
Trigger: GGGAAAAGGACCTGGCCATCACCTTCCAATACCTGC...CCTTCCAATACCTGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR TCA 90 bp GCTGAGCAGGAGCAATGGGCTCTCGCTTCTGTCCTGAGGTTCTTGGGTGGTGAGTATGTTTGGACTTCATaGGCTATGGACCCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: AEQEQWALASVLRFLGGEYVWTS*AMDPRG
Trigger: ACCCCTGGGGTCCATAGCTCATGAAGTCCAAACATA...CTCACCACCCAAGAACCTCAGGACAGAAGCGAGAGCCCATTGCTCCTGCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp TGTCTCCTCCCTCTTCGGCCTAGGACTTTCTTGAAGGAAAAGAGCTGTAGTGGTGCACTCTGCTTCAGCTaGGCAGGCTCTTCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: CLLPLRPRTFLKEKSCSGALCFS*AGSSGD
Trigger: GTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGC...ACCACTACAGCTCTTTTCCTTCAAGAAAGTCCTAGGCCGAAGAGGGAGGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp ACTCTCCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTCATCTAGAAGCACTCTaGTTCAGCTGCGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TLHLEALCFSCAGSSGDSHLEAL*FSCAGS
Trigger: AGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATG...AGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CCA 90 bp ACTCTCCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGCAGGAGGTCTTACGTaGTGCCTCATAGGGGATAGA +
Preference number: 4 (lower is better)
Translates to: TLHLEALCFSCAGSSGDSAGGLT*CLIGDR
Trigger: TCTATCCCCTATGAGGCACCACGTAAGACCTCCTGC...AGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CCA 90 bp AGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTGCCAGAGGTGCTTGCTaGGAATGTATAGATATGTTT +
Preference number: 4 (lower is better)
Translates to: STLLQLRRLFRGLWEPAGARGAC*ECIDMF
Trigger: AAACATATCTATACATTCCCAGCAAGCACCTCTGGC...ACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR TCA 90 bp GTCGCTCAGCTCTTCCGAGGACTTGATCCGTCTCAAGATGACTGTCTCCTCCCTGCCACAGTAAAGGACTaGAGGTCAGGATTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: VAQLFRGLDPSQDDCLLPATVKD*RSGFQA
Trigger: AGCCTGGAATCCTGACCTTCAGTCCTTTACTGTGGC...AGGGAGGAGACAGTCATCTTGAGACGGATCAAGTCCTCGGAAGAGCTGAGCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp TGGGAAGCCAGAGGTGCTTGCTGGGAATGTATAGATATGTTTGGACTTCATGAGGGCTCCAAGCCCATCTaGTTGGCCCGACACCAGCGC +
Preference number: 4 (lower is better)
Translates to: WEARGACWECIDMFGLHEGSKPI*LARHQR
Trigger: GCGCTGGTGTCGGGCCAAGCAGATGGGCTTGGAGCC...CTCATGAAGTCCAAACATATCTATACATTCCCAGCAAGCACCTCTGGCTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp ACTCTCCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGAGGTCTTACGTGGTaGCTCATAGGGGATAGAGAT +
Preference number: 4 (lower is better)
Translates to: TLHLEALCFSCAGSSGDSGGLTW*LIGDRD
Trigger: ATCTCTATCCCCTATGAGGCACCACGTAAGACCTCC...AGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp GTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCAGGTATTGGAAGGCATCTAGAAGCACTCTaGTTCAGCTGCGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VPNLPDHGSGRQAAGIGRHLEAL*FSCAGS
Trigger: AGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATG...CCTTCCAATACCTGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp GCTGAGCAGGAGCAATGGGCTCTCGCTTCTGTCCTGAGGTTCTTGGGTGGTGAGGGGTTTTTCTACCACTaGATCTTCTGTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AEQEQWALASVLRFLGGEGFFYH*IFCPAP
Trigger: AGGAGCAGGACAGAAGATGCAGTGGTAGAAAAACCC...CTCACCACCCAAGAACCTCAGGACAGAAGCGAGAGCCCATTGCTCCTGCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532830.5
CDS-3UTR CCA 90 bp CCATGTCTGACTGTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCAACTCTGGGAGCCTGCTaGTTAGATGGAGGAGTTGAG +
Preference number: 4 (lower is better)
Translates to: PCLTVPNLPDHGSGRQAATLGAC*LDGGVE
Trigger: CTCAACTCCTCCATCTAACCAGCAGGCTCCCAGAGT...TGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCACAGTCAGACATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CCA 90 bp AGGTGGCCCCCGATGTGGGAAGCCAGAGGTGCTTGCTGGGAATGTATAGATATGCCAGGGGTCCTTCTCTaGCAAAGCACCCATGTTTGT +
Preference number: 4 (lower is better)
Translates to: RWPPMWEARGACWECIDMPGVLL*QSTHVC
Trigger: ACAAACATGGGTGCTTTGCCAGAGAAGGACCCCTGG...CATATCTATACATTCCCAGCAAGCACCTCTGGCTTCCCACATCGGGGGCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR TCA 90 bp TCATCTCCTAACTTGCTAGGGACTGCCAGTCAAAGCAGGGCCACAGTAAAGGACCCAGAAGGTGAGTCATaGGTAGTTTCCCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SSPNLLGTASQSRATVKDPEGES*VVSLWA
Trigger: GGCCCACAGGGAAACTACTCATGACTCACCTTCTGG...GTCCTTTACTGTGGCCCTGCTTTGACTGGCAGTCCCTAGCAAGTTAGGAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp ATCTTTTCCTCATGGATCAACTGTCCATGTCTGACTGTGCCTAACTTGCCAGATGGCTCCAAGCCCATCTaGTTGGCCCGACACCAGCGC +
Preference number: 4 (lower is better)
Translates to: IFSSWINCPCLTVPNLPDGSKPI*LARHQR
Trigger: GCGCTGGTGTCGGGCCAAGCAGATGGGCTTGGAGCC...ATCTGGCAAGTTAGGCACAGTCAGACATGGACAGTTGATCCATGAGGAAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR GCA 90 bp TGGGAAGCCAGAGGTGCTTGCTGGGAATGTATAGATATGTTTGGACTTCATGAGGCTCACTGCCAGCTCTaGCTCCCGGGTTCACGCCAT +
Preference number: 4 (lower is better)
Translates to: WEARGACWECIDMFGLHEAHCQL*LPGSRH
Trigger: ATGGCGTGAACCCGGGAGGCAGAGCTGGCAGTGAGC...CTCATGAAGTCCAAACATATCTATACATTCCCAGCAAGCACCTCTGGCTTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CCA 90 bp CTGACTGTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCAGGTATTACTCTGGGAGCCTGCTaGTTAGATGGAGGAGTTGAG +
Preference number: 4 (lower is better)
Translates to: LTVPNLPDHGSGRQAAGITLGAC*LDGGVE
Trigger: CTCAACTCCTCCATCTAACCAGCAGGCTCCCAGAGT...AATACCTGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCACAGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CCA 90 bp ACTCTCCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTATTCCTGGCCTTAGGTaGGAGAGCATCTTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: TLHLEALCFSCAGSSGDSIPGLR*ESIFSS
Trigger: TGAGGAAAAGATGCTCTCCCACCTAAGGCCAGGAAT...AGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CCA 90 bp TCATCTCCTAACTTGCTAGGGACTGCCAGTCAAAGCAGGGCCACAGTAAAGGACGGACTTCATGAGCTATaGACCCCAGGGGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SSPNLLGTASQSRATVKDGLHEL*TPGVLL
Trigger: GAGAAGGACCCCTGGGGTCCATAGCTCATGAAGTCC...GTCCTTTACTGTGGCCCTGCTTTGACTGGCAGTCCCTAGCAAGTTAGGAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR CAA 72 bp TCATGGATCAACTGTCCATGTCTGACTGTGCCTAACTaGCCAGATCATGGGTCAGGGAGACAGGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: SWINCPCLTVPN*PDHGSGRQAAG
Trigger: ACCTGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCACAGTCAGACATGGACAGTTGATCCATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp CTGACTGTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCAGGTATTGGAGGTCTTACGTGGTaGCTCATAGGGGATAGAGAT +
Preference number: 4 (lower is better)
Translates to: LTVPNLPDHGSGRQAAGIGGLTW*LIGDRD
Trigger: ATCTCTATCCCCTATGAGGCACCACGTAAGACCTCC...AATACCTGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCACAGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR GCA 90 bp CTGTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCAGGTATTGGAAGTGGGAAGCCAGAGGTaGTTGCTGGGAATGTATAGA +
Preference number: 4 (lower is better)
Translates to: LCLTCQIMGQGDRQQVLEVGSQR*LLGMYR
Trigger: TCTATACATTCCCAGCAAGCACCTCTGGCTTCCCAC...TTCCAATACCTGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CCA 90 bp GTAGTGGTGCCTCTCTCATCTCCTAACTTGCTAGGGACTGCCAGTCAAAGCAGGAGCCTCCTGAGTAGCTaGGACTACACCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: VVVPLSSPNLLGTASQSRSLLSS*DYTWLI
Trigger: AATTAGCCAGGTGTAGTCCCAGCTACTCAGGAGGCT...CCTGCTTTGACTGGCAGTCCCTAGCAAGTTAGGAGATGAGAGAGGCACCACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR TCA 90 bp CACAGTAAAGGACTGAAGGTCAGGATTCCAGGCTCAATATTCTTTATTGATAAGCCTCCGCAGCCGGGCTaGGCTGAGCAGGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: HSKGLKVRIPGSIFFIDKPPQPG*AEQEQW
Trigger: CCATTGCTCCTGCTCAGCTCAGCCCGGCTGCGGAGG...CTTATCAATAAAGAATATTGAGCCTGGAATCCTGACCTTCAGTCCTTTACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
3UTR CAA 72 bp AAAAGAGCTGTAGTGGTGCCTCTCTCATCTCCTAACTaGCTAGGGACTGCCAGTCAAAGCAGGGCCACAGTA +
Preference number: 4 (lower is better)
Translates to: KRAVVVPLSSPN*LGTASQSRATV
Trigger: TACTGTGGCCCTGCTTTGACTGGCAGTCCCTAGCAAGTTAGGAGATGAGAGAGGCACCACTACAGCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR TCA 90 bp TCATCTCCTAACTTGCTAGGGACTGCCAGTCAAAGCAGGGCCACAGTAAAGGACGGCCTAGGACTTTCTTaGAGGAAAAGAGCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: SSPNLLGTASQSRATVKDGLGLS*RKRAVV
Trigger: CACTACAGCTCTTTTCCTTCAAGAAAGTCCTAGGCC...GTCCTTTACTGTGGCCCTGCTTTGACTGGCAGTCCCTAGCAAGTTAGGAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CCA 90 bp GAGGTCGCTCAGCTCTTCCGAGGACTTGATCCGTCTCAAGATGACTGTCTCCTCGCCAGAGGTGCTTGCTaGGAATGTATAGATATGTTT +
Preference number: 4 (lower is better)
Translates to: EVAQLFRGLDPSQDDCLLARGAC*ECIDMF
Trigger: AAACATATCTATACATTCCCAGCAAGCACCTCTGGC...GAGGAGACAGTCATCTTGAGACGGATCAAGTCCTCGGAAGAGCTGAGCGACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR TCA 90 bp ATCTTTTCCTCATGGATCAACTGTCCATGTCTGACTGTGCCTAACTTGCCAGATGCAGGTATTGGAAGGTaGTGGCCAGGTCCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: IFSSWINCPCLTVPNLPDAGIGR*WPGPFP
Trigger: GGGAAAAGGACCTGGCCATCACCTTCCAATACCTGC...ATCTGGCAAGTTAGGCACAGTCAGACATGGACAGTTGATCCATGAGGAAAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CCA 90 bp CACAGTAAAGGACTGAAGGTCAGGATTCCAGGCTCAATATTCTTTATTGATAAGGGAGAGACCGGCCAGTaGGCGCGAGAAAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: HSKGLKVRIPGSIFFIDKGETGQ*ARERQL
Trigger: CAGCTGTCTTTCTCGCGCCCACTGGCCGGTCTCTCC...CTTATCAATAAAGAATATTGAGCCTGGAATCCTGACCTTCAGTCCTTTACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312419.8
CDS-3UTR CCA 90 bp CTTCGGCCTAGGACTTTCTTGAAGGAAAAGAGCTGTAGTGGTGCCTCTCTCATCATTCCTGGCCTTAGGTaGGAGAGCATCTTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: LRPRTFLKEKSCSGASLIIPGLR*ESIFSS
Trigger: TGAGGAAAAGATGCTCTCCCACCTAAGGCCAGGAAT...GATGAGAGAGGCACCACTACAGCTCTTTTCCTTCAAGAAAGTCCTAGGCCGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR GCA 90 bp ATCTTTTCCTCATGGATCAACTGTCCATGTCTGACTGTGCCTAACTTGCCAGATCATCTAGAAGCACTCTaGTTCAGCTGCGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: IFSSWINCPCLTVPNLPDHLEAL*FSCAGS
Trigger: AGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATG...ATCTGGCAAGTTAGGCACAGTCAGACATGGACAGTTGATCCATGAGGAAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CCA 90 bp TCCTCATGGATCAACTGTCCATGTCTGACTGTGCCTAACTTGCCAGATCATGGGCTTGAGTGGAAAGGATaGGGTCTCTGGGTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: SSWINCPCLTVPNLPDHGLEWKG*GLWVFL
Trigger: TAGAAAAACCCAGAGACCCCATCCTTTCCACTCAAG...CCCATGATCTGGCAAGTTAGGCACAGTCAGACATGGACAGTTGATCCATGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532830.5
CDS-3UTR GCA 90 bp CACAGTAAAGGACTGAAGGTCAGGATTCCAGGCTCAATATTCTTTATTGATAAGTCACCCAGGCTGGAGTaGAGTGATGCGGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HSKGLKVRIPGSIFFIDKSPRLE*SDAVSA
Trigger: AGCTGAGACCGCATCACTGCACTCCAGCCTGGGTGA...CTTATCAATAAAGAATATTGAGCCTGGAATCCTGACCTTCAGTCCTTTACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR TCA 90 bp CACAGTAAAGGACTGAAGGTCAGGATTCCAGGCTCAATATTCTTTATTGATAAGCCAGAAGGTGAGTCATaGGTAGTTTCCCTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: HSKGLKVRIPGSIFFIDKPEGES*VVSLWA
Trigger: GGCCCACAGGGAAACTACTCATGACTCACCTTCTGG...CTTATCAATAAAGAATATTGAGCCTGGAATCCTGACCTTCAGTCCTTTACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CCA 90 bp ATCTTTTCCTCATGGATCAACTGTCCATGTCTGACTGTGCCTAACTTGCCAGATATTCCTGGCCTTAGGTaGGAGAGCATCTTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: IFSSWINCPCLTVPNLPDIPGLR*ESIFSS
Trigger: TGAGGAAAAGATGCTCTCCCACCTAAGGCCAGGAAT...ATCTGGCAAGTTAGGCACAGTCAGACATGGACAGTTGATCCATGAGGAAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR TCA 90 bp CACAGTAAAGGACTGAAGGTCAGGATTCCAGGCTCAATATTCTTTATTGATAAGTATGTTTGGACTTCATaGGCTATGGACCCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: HSKGLKVRIPGSIFFIDKYVWTS*AMDPRG
Trigger: ACCCCTGGGGTCCATAGCTCATGAAGTCCAAACATA...CTTATCAATAAAGAATATTGAGCCTGGAATCCTGACCTTCAGTCCTTTACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS GCA 90 bp CGTGTGATCCCGGTGCAGGGCCCGTACTGCCAGGCCAGGTCAAACTaGCTCAGCAGCTCCAGCTCCGCTTCCTCCTCGTCGCGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: RVIPVQGPYCQARSN*LSSSSSASSSSRGW
Trigger: CCAGCCCCGCGACGAGGAGGAAGCGGAGCTGGAGCTGCTGAGGCAGTTTGACCTGGCCTGGCAGTACGGGCCCTGCACCGGGATCACACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312419.8
ENST00000524743.1
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000542982.1
CDS GCA 90 bp GGGTTCTCACCGGTGCAGGGCCCGTACTGCCAGGCCAGGTCAAACTaGCTCAGCAGCTCCAGCTCCGCTTCCTCCTCGTCGCGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: GFSPVQGPYCQARSN*LSSSSSASSSSRGW
Trigger: CCAGCCCCGCGACGAGGAGGAAGCGGAGCTGGAGCTGCTGAGGCAGTTTGACCTGGCCTGGCAGTACGGGCCCTGCACCGGTGAGAACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528087.1
ENST00000529000.1
ENST00000533429.1
ENST00000534515.1
CDS GCA 90 bp TGGCTGGGAGAGGCGCCTCCGTGGGGCTGGGTGGGTTCTCACCGGTaGAGGGCCCGTACTGCCAGGCCAGGTCAAACTGCCTCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: WLGEAPPWGWVGSHR*RARTARPGQTASAA
Trigger: AGCTGCTGAGGCAGTTTGACCTGGCCTGGCAGTACGGGCCCTGCACCGGTGAGAACCCACCCAGCCCCACGGAGGCGCCTCTCCCAGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528087.1
ENST00000529000.1
ENST00000533429.1
ENST00000534515.1
CDS GCA 90 bp ATGCCAGAGACGGTGCAGGGCCCGTACTGCCAGGCCAGGTCAAACTaGCTCAGCAGCTCCAGCTCCGCTTCCTCCTCGTCGCGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: MPETVQGPYCQARSN*LSSSSSASSSSRGW
Trigger: CCAGCCCCGCGACGAGGAGGAAGCGGAGCTGGAGCTGCTGAGGCAGTTTGACCTGGCCTGGCAGTACGGGCCCTGCACCGTCTCTGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539074.1
CDS-3UTR CAA 90 bp CCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGTCCAAGCCCATCTGCTaGGCCCGACACCAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: PPGSACQGFLRSRAELSRSKPIC*ARHQRC
Trigger: GCAGCGCTGGTGTCGGGCCAAGCAGATGGGCTTGGA...CCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
CDS GCA 90 bp GTCTTCAGCACCTGCCACACCTCTGGGGGAGGCTCCAAGCCCATCTaGTTGGCCCGACACCAGCGCTGCAGCCGTGTGATCCCGGTGCAG +
Preference number: 5 (lower is better)
Translates to: VFSTCHTSGGGSKPI*LARHQRCSRVIPVQ
Trigger: CTGCACCGGGATCACACGGCTGCAGCGCTGGTGTCGGGCCAAGCAGATGGGCTTGGAGCCTCCCCCAGAGGTGTGGCAGGTGCTGAAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312419.8
ENST00000524743.1
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000542982.1
CDS GCA 90 bp GTCTTCAGCACCTGCCACACCTCTGGGGGAGGCTCCAAGCCCATCTaGTTGGCCCGACACCAGCGCTGCAGCCGTGTGATCCCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: VFSTCHTSGGGSKPI*LARHQRCSRVIPAR
Trigger: CCTGGCAGGGATCACACGGCTGCAGCGCTGGTGTCGGGCCAAGCAGATGGGCTTGGAGCCTCCCCCAGAGGTGTGGCAGGTGCTGAAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528087.1
ENST00000533429.1
ENST00000534515.1
CDS-3UTR CAA 90 bp CCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCAGGAGCAGCAGGTCCTGCAAGTaGAGACCCTCGCCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: PGSACQGFLRSRAELSRSSRSCK*RPSPAL
Trigger: CAGGGCTGGCGAGGGTCTCAACTTGCAGGACCTGCT...GCTCCTGCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS TCA 90 bp GGTCAGAGTCACGCAAGCGCTTGGGTGACTTCAGAGACGTGTGGGTaGCTGGCTGGGAGAGGCGCCTCCGTGGGGCTGGGTGGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: GQSHASAWVTSETCG*LAGRGASVGLGGFS
Trigger: TGAGAACCCACCCAGCCCCACGGAGGCGCCTCTCCCAGCCAGTCACCCACACGTCTCTGAAGTCACCCAAGCGCTTGCGTGACTCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528087.1
ENST00000529000.1
ENST00000533429.1
ENST00000534515.1
CDS TCA 90 bp GCTCCAAGCCCATCTGCTTGGCCCGACACCAGCGCTGCAGCCGTGTaGTCCCTGCCAGGGTGGGAAGAAGACTCTGGAGACTTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: APSPSAWPDTSAAAV*SLPGWEEDSGDLWG
Trigger: CCCCCACAAGTCTCCAGAGTCTTCTTCCCACCCTGGCAGGGATCACACGGCTGCAGCGCTGGTGTCGGGCCAAGCAGATGGGCTTGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528087.1
ENST00000533429.1
ENST00000534515.1
CDS GCA 90 bp TCTGGGGGAGGCTCCAAGCCCATCTGCTTGGCCCGACACCAGCGCTaGAGCCGTGTGATCCCTGCCAGGGTGGGAAGAAGACTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: SGGGSKPICLARHQR*SRVIPARVGRRLWR
Trigger: TCTCCAGAGTCTTCTTCCCACCCTGGCAGGGATCACACGGCTGCAGCGCTGGTGTCGGGCCAAGCAGATGGGCTTGGAGCCTCCCCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528087.1
ENST00000533429.1
ENST00000534515.1
CDS-3UTR CAA 90 bp ACACCTCCAGGTTCTGCCTGCCAAGGGTTCCTCCGCAGCCGGGCTGAGCTGAGCGACAGGCAGCAGGTATaGGAAGGTGATGGCCAGGTC +
Preference number: 5 (lower is better)
Translates to: TPPGSACQGFLRSRAELSDRQQV*EGDGQV
Trigger: GACCTGGCCATCACCTTCCAATACCTGCTGCCTGTC...GCTCAGCTCAGCCCGGCTGCGGAGGAACCCTTGGCAGGCAGAACCTGGAGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CAA 90 bp AAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGGCATTAGTGAACCCCTaGCCCTGGGAGCTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: KHSASAAQALPGTLGACWALVNP*PWELSQ
Trigger: CTGGCTGAGCTCCCAGGGCAAGGGGTTCACTAATGC...CCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR CAA 90 bp GAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGCATTAGTGAACCCCTaGCCCTGGGAGCTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: EALCFSCAGSSGDSGSLLALVNP*PWELSQ
Trigger: CTGGCTGAGCTCCCAGGGCAAGGGGTTCACTAATGC...CAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR CAA 90 bp CACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTTAGCATTAGTGAACCCCTaGCCCTGGGAGCTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: HSASAAQALPGTLGACWLALVNP*PWELSQ
Trigger: CTGGCTGAGCTCCCAGGGCAAGGGGTTCACTAATGC...TAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR CAA 90 bp AAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGCTGACTGTGCCTAACTaGCCAGATCATGGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: KHSASAAQALPGTLGACWLTVPN*PDHGSG
Trigger: CCCTGACCCATGATCTGGCAAGTTAGGCACAGTCAG...CCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CAA 90 bp AAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTTCCATCGCAGCAGCTaGAGTGGAAAGGATGGGGTC +
Preference number: 5 (lower is better)
Translates to: KHSASAAQALPGTLGACWFHRSS*SGKDGV
Trigger: GACCCCATCCTTTCCACTCAAGCTGCTGCGATGGAA...CCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532830.5
CDS-3UTR CAA 90 bp GTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCAGGTATTGGAAGGTCCAAGCCCATCTGCTaGGCCCGACACCAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: VPNLPDHGSGRQAAGIGRSKPIC*ARHQRC
Trigger: GCAGCGCTGGTGTCGGGCCAAGCAGATGGGCTTGGA...CCTTCCAATACCTGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR CAA 90 bp CCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGGACAGGCAGCAGGTATaGGAAGGTGATGGCCAGGTC +
Preference number: 5 (lower is better)
Translates to: PSRSTLLQLRRLFRGLWEDRQQV*EGDGQV
Trigger: GACCTGGCCATCACCTTCCAATACCTGCTGCCTGTC...CTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CAA 90 bp CTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCCTGCTGGTTAGACTGACTGTGCCTAACTaGCCAGATCATGGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: LCFSCAGSSGDSGSLLVRLTVPN*PDHGSG
Trigger: CCCTGACCCATGATCTGGCAAGTTAGGCACAGTCAG...TCTAACCAGCAGGCTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CAA 90 bp AGGTGGCCCCCGATGTGGGAAGCCAGAGGTGCTTGCTGGGAATGTATAGATATGCTCGCCAGCCCTGCTTaGGATCAAGGTGGCCCCCGA +
Preference number: 5 (lower is better)
Translates to: RWPPMWEARGACWECIDMLASPA*DQGGPR
Trigger: TCGGGGGCCACCTTGATCCAAAGCAGGGCTGGCGAG...CATATCTATACATTCCCAGCAAGCACCTCTGGCTTCCCACATCGGGGGCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS GCA 90 bp CCCAGACACTCCCTCTTCCCCTGGTCCAGGTTCTCTGGCCTAATGTaGTTCCATCGCAGCAGCTTGAGTGGAAAGGATGGGGTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: PRHSLFPWSRFSGLM*FHRSSLSGKDGVSG
Trigger: CCCAGAGACCCCATCCTTTCCACTCAAGCTGCTGCGATGGAAGCACATTAGGCCAGAGAACCTGGACCAGGGGAAGAGGGAGTGTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532830.5
CDS GCA 90 bp CCTGTGGGCCAGAATTCTTTCAGGCAGTCCTTCCTAGTCCCTCACTaGCTTCCCAGACACTCCCTCTTCCCCTGGTCCAGGTTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: PVGQNSFRQSFLVPH*LPRHSLFPWSRFSG
Trigger: GCCAGAGAACCTGGACCAGGGGAAGAGGGAGTGTCTGGGAAGGCAGTGAGGGACTAGGAAGGACTGCCTGAAAGAATTCTGGCCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532830.5
CDS-3UTR CAA 90 bp CTGAGCAGGTCCTGCAAGTTGAGACCCTCGCCAGCCCTGCTTTGGATCAAGGTGGACAGGCAGCAGGTATaGGAAGGTGATGGCCAGGTC +
Preference number: 5 (lower is better)
Translates to: LSRSCKLRPSPALLWIKVDRQQV*EGDGQV
Trigger: GACCTGGCCATCACCTTCCAATACCTGCTGCCTGTC...CACCTTGATCCAAAGCAGGGCTGGCGAGGGTCTCAACTTGCAGGACCTGCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CAA 90 bp GCTGAGCAGGAGCAATGGGCTCTCGCTTCTGTCCTGAGGTTCTTGGGTGGTGAGGACAGGCAGCAGGTATaGGAAGGTGATGGCCAGGTC +
Preference number: 5 (lower is better)
Translates to: AEQEQWALASVLRFLGGEDRQQV*EGDGQV
Trigger: GACCTGGCCATCACCTTCCAATACCTGCTGCCTGTC...CTCACCACCCAAGAACCTCAGGACAGAAGCGAGAGCCCATTGCTCCTGCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CAA 90 bp ACCACTCTCCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACGACAGGCAGCAGGTATaGGAAGGTGATGGCCAGGTC +
Preference number: 5 (lower is better)
Translates to: TTLHLEALCFSCAGSSGDDRQQV*EGDGQV
Trigger: GACCTGGCCATCACCTTCCAATACCTGCTGCCTGTC...GTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGGAGAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CAA 90 bp CCATCTAGAAGCACTCTGCTTCAGCTGCGCAGGCTCTTCCGGGGACTCTGGGAGCTGACTGTGCCTAACTaGCCAGATCATGGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: PSRSTLLQLRRLFRGLWELTVPN*PDHGSG
Trigger: CCCTGACCCATGATCTGGCAAGTTAGGCACAGTCAG...CTCCCAGAGTCCCCGGAAGAGCCTGCGCAGCTGAAGCAGAGTGCTTCTAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS-3UTR CAA 90 bp CCTCGCCAGCCCTGCTTTGGATCAAGGTGGCCCCCGATGTGGGAAGCCAGAGGTAGCTCTTCCGAGGACTaGATCCGTCTCAAGATGACT +
Preference number: 5 (lower is better)
Translates to: PRQPCFGSRWPPMWEARGSSSED*IRLKMT
Trigger: AGTCATCTTGAGACGGATCAAGTCCTCGGAAGAGCT...ACCTCTGGCTTCCCACATCGGGGGCCACCTTGATCCAAAGCAGGGCTGGCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS TCA 90 bp GCAGGAGCAATGGGCTCTCGCTTCTGTCCTGAGGTTCTTGGGTGGTaGGCAAGAGAGCTAAGGGCAGGAGGTCTTACGTGGTGCCTCATA +
Preference number: 5 (lower is better)
Translates to: AGAMGSRFCPEVLGW*ARELRAGGLTWCLI
Trigger: TATGAGGCACCACGTAAGACCTCCTGCCCTTAGCTCTCTTGCTCACCACCCAAGAACCTCAGGACAGAAGCGAGAGCCCATTGCTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000312419.8
ENST00000528087.1
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000533429.1
ENST00000534515.1
ENST00000539074.1
CDS-3UTR CAA 90 bp TCCTCATGGATCAACTGTCCATGTCTGACTGTGCCTAACTTGCCAGATCATGGGTCCAAGCCCATCTGCTaGGCCCGACACCAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: SSWINCPCLTVPNLPDHGSKPIC*ARHQRC
Trigger: GCAGCGCTGGTGTCGGGCCAAGCAGATGGGCTTGGA...CCCATGATCTGGCAAGTTAGGCACAGTCAGACATGGACAGTTGATCCATGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR CAA 90 bp CTGACTGTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCAGGTATTGCATTAGTGAACCCCTaGCCCTGGGAGCTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: LTVPNLPDHGSGRQAAGIALVNP*PWELSQ
Trigger: CTGGCTGAGCTCCCAGGGCAAGGGGTTCACTAATGC...AATACCTGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCACAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR CAA 90 bp CTTACCAAAGCCCCTCAGATGATGGTCATGTCTGAGCAGGTCCTGCAAGTTGAGAGCAGGTCCTGCAAGTaGAGACCCTCGCCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: LTKAPQMMVMSEQVLQVESRSCK*RPSPAL
Trigger: CAGGGCTGGCGAGGGTCTCAACTTGCAGGACCTGCT...CTCAACTTGCAGGACCTGCTCAGACATGACCATCATCTGAGGGGCTTTGGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CAA 90 bp CTGACTGTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCAGGTATTCTGACTGTGCCTAACTaGCCAGATCATGGGTCAGGG +
Preference number: 5 (lower is better)
Translates to: LTVPNLPDHGSGRQAAGILTVPN*PDHGSG
Trigger: CCCTGACCCATGATCTGGCAAGTTAGGCACAGTCAG...AATACCTGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCACAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
ENST00000539074.1
CDS CCA 90 bp CTCTGGCCTAATGTGCTTCCATCGCAGCAGCTTGAGTGGAAAGGATaGGGTCTCTGGGTTTTTCTACCACTGCATCTTCTGTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LWPNVLPSQQLEWKG*GLWVFLPLHLLSCS
Trigger: GGAGCAGGACAGAAGATGCAGTGGTAGAAAAACCCAGAGACCCCATCCTTTCCACTCAAGCTGCTGCGATGGAAGCACATTAGGCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532830.5
CDS-3UTR CAA 90 bp ATCTTTTCCTCATGGATCAACTGTCCATGTCTGACTGTGCCTAACTTGCCAGATTCCAAGCCCATCTGCTaGGCCCGACACCAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: IFSSWINCPCLTVPNLPDSKPIC*ARHQRC
Trigger: GCAGCGCTGGTGTCGGGCCAAGCAGATGGGCTTGGA...ATCTGGCAAGTTAGGCACAGTCAGACATGGACAGTTGATCCATGAGGAAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312419.8
ENST00000529704.5
ENST00000530584.5
ENST00000532830.5
CDS-3UTR CAA 90 bp CTGTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCAGGTATTGGAACTCTCATCTCCTAACTaGCTAGGGACTGCCAGTCAA +
Preference number: 5 (lower is better)
Translates to: LCLTCQIMGQGDRQQVLELSSPN*LGTASQ
Trigger: TTGACTGGCAGTCCCTAGCAAGTTAGGAGATGAGAG...TTCCAATACCTGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CAA 90 bp CCATGTCTGACTGTGCCTAACTTGCCAGATCATGGGTCAGGGAGACAGGCAGCACGGCCTAGGACTTTCTaGAAGGAAAAGAGCTGTAGT +
Preference number: 5 (lower is better)
Translates to: PCLTVPNLPDHGSGRQAARPRTF*KEKSCS
Trigger: ACTACAGCTCTTTTCCTTCAAGAAAGTCCTAGGCCG...TGCTGCCTGTCTCCCTGACCCATGATCTGGCAAGTTAGGCACAGTCAGACATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CAA 90 bp TCATCTCCTAACTTGCTAGGGACTGCCAGTCAAAGCAGGGCCACAGTAAAGGACAGCTCTTCCGAGGACTaGATCCGTCTCAAGATGACT +
Preference number: 5 (lower is better)
Translates to: SSPNLLGTASQSRATVKDSSSED*IRLKMT
Trigger: AGTCATCTTGAGACGGATCAAGTCCTCGGAAGAGCT...GTCCTTTACTGTGGCCCTGCTTTGACTGGCAGTCCCTAGCAAGTTAGGAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CAA 90 bp CACAGTAAAGGACTGAAGGTCAGGATTCCAGGCTCAATATTCTTTATTGATAAGTCCAAGCCCATCTGCTaGGCCCGACACCAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: HSKGLKVRIPGSIFFIDKSKPIC*ARHQRC
Trigger: GCAGCGCTGGTGTCGGGCCAAGCAGATGGGCTTGGA...CTTATCAATAAAGAATATTGAGCCTGGAATCCTGACCTTCAGTCCTTTACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CAA 90 bp CACAGTAAAGGACTGAAGGTCAGGATTCCAGGCTCAATATTCTTTATTGATAAGCTCGCCAGCCCTGCTTaGGATCAAGGTGGCCCCCGA +
Preference number: 5 (lower is better)
Translates to: HSKGLKVRIPGSIFFIDKLASPA*DQGGPR
Trigger: TCGGGGGCCACCTTGATCCAAAGCAGGGCTGGCGAG...CTTATCAATAAAGAATATTGAGCCTGGAATCCTGACCTTCAGTCCTTTACTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS-3UTR CAA 90 bp ATCTTTTCCTCATGGATCAACTGTCCATGTCTGACTGTGCCTAACTTGCCAGATCTCTCATCTCCTAACTaGCTAGGGACTGCCAGTCAA +
Preference number: 5 (lower is better)
Translates to: IFSSWINCPCLTVPNLPDLSSPN*LGTASQ
Trigger: TTGACTGGCAGTCCCTAGCAAGTTAGGAGATGAGAG...ATCTGGCAAGTTAGGCACAGTCAGACATGGACAGTTGATCCATGAGGAAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312419.8
ENST00000529704.5
CDS CCA 72 bp AGCAGCTCCAGCTCCGCTTCCTCCTCGTCGCGGGGCTaGGGCTCCTCCCCTAGCTCGGGTGCCAGCTCCCCC +
Preference number: 6 (lower is better)
Translates to: SSSSSASSSSRG*GSSPSSGASSP
Trigger: GGGGGAGCTGGCACCCGAGCTAGGGGAGGAGCCCCAGCCCCGCGACGAGGAGGAAGCGGAGCTGGAGCTGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312419.8
ENST00000528087.1
ENST00000539074.1
CDS GCA 72 bp GGCTCCAAGCCCATCTGCTTGGCCCGACACCAGCGCTaGAGCCGTGTGATCCCGGTGCAGGGCCCGTACTGC +
Preference number: 6 (lower is better)
Translates to: GSKPICLARHQR*SRVIPVQGPYC
Trigger: GCAGTACGGGCCCTGCACCGGGATCACACGGCTGCAGCGCTGGTGTCGGGCCAAGCAGATGGGCTTGGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312419.8
ENST00000524743.1
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000542982.1
CDS CAA 90 bp TTCAGCACCTGCCACACCTCTGGGGGAGGCTCCAAGCCCATCTGCTaGGCCCGACACCAGCGCTGCAGCCGTGTGATCCCGGTGCAGGGC +
Preference number: 6 (lower is better)
Translates to: FSTCHTSGGGSKPIC*ARHQRCSRVIPVQG
Trigger: GCCCTGCACCGGGATCACACGGCTGCAGCGCTGGTGTCGGGCCAAGCAGATGGGCTTGGAGCCTCCCCCAGAGGTGTGGCAGGTGCTGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000312419.8
ENST00000524743.1
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000542982.1
CDS GCA 72 bp CGCTGCAGCCGTGTGATCCCGGTGCAGGGCCCGTACTaGCAGGCCAGGTCAAACTGCCTCAGCAGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: RCSRVIPVQGPY*QARSNCLSSSS
Trigger: GCTGGAGCTGCTGAGGCAGTTTGACCTGGCCTGGCAGTACGGGCCCTGCACCGGGATCACACGGCTGCAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312419.8
ENST00000524743.1
ENST00000529704.5
ENST00000530584.5
ENST00000531239.2
ENST00000532830.5
ENST00000542982.1
CDS GCA 72 bp GGCTCCAAGCCCATCTGCTTGGCCCGACACCAGCGCTaGAGCCGTGTGATCCCTGCCAGGGTGGGAAGAAGA +
Preference number: 6 (lower is better)
Translates to: GSKPICLARHQR*SRVIPARVGRR
Trigger: TCTTCTTCCCACCCTGGCAGGGATCACACGGCTGCAGCGCTGGTGTCGGGCCAAGCAGATGGGCTTGGAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528087.1
ENST00000533429.1
ENST00000534515.1
CDS CCA 72 bp GAGTCACGCAAGCGCTTGGGTGACTTCAGAGACGTGTaGGTGACTGGCTGGGAGAGGCGCCTCCGTGGGGCT +
Preference number: 6 (lower is better)
Translates to: ESRKRLGDFRDV*VTGWERRLRGA
Trigger: AGCCCCACGGAGGCGCCTCTCCCAGCCAGTCACCCACACGTCTCTGAAGTCACCCAAGCGCTTGCGTGACTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528087.1
ENST00000529000.1
ENST00000533429.1
ENST00000534515.1
CDS GCA 72 bp CTTGGCCCGACACCAGCGCTGCAGCCGTGTGATCCCTaGCAGGGTGGGAAGAAGACTCTGGAGACTTGTGGG +
Preference number: 6 (lower is better)
Translates to: LGPTPALQPCDP*QGGKKTLETCG
Trigger: CCCACAAGTCTCCAGAGTCTTCTTCCCACCCTGGCAGGGATCACACGGCTGCAGCGCTGGTGTCGGGCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528087.1
ENST00000533429.1
ENST00000534515.1
CDS GCA 72 bp GGGATAGAGATGCCAGAGACGGTGCAGGGCCCGTACTaGCAGGCCAGGTCAAACTGCCTCAGCAGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: GIEMPETVQGPY*QARSNCLSSSS
Trigger: GCTGGAGCTGCTGAGGCAGTTTGACCTGGCCTGGCAGTACGGGCCCTGCACCGTCTCTGGCATCTCTATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539074.1
CDS CCA 72 bp AGGAGGCAACTGCGGGGAAGAGGAGAGACCGGCCAGTaGGCGCGAGAAAGACAGCTGCTGAGAGAGACAGAC +
Preference number: 6 (lower is better)
Translates to: RRQLRGRGETGQ*ARERQLLRETD
Trigger: GTCTGTCTCTCTCAGCAGCTGTCTTTCTCGCGCCCACTGGCCGGTCTCTCCTCTTCCCCGCAGTTGCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312419.8
ENST00000529000.1
ENST00000530584.5
ENST00000531239.2
ENST00000534515.1
ENST00000539074.1
ENST00000542982.1
CDS GCA 72 bp CAGCTGCTCTTCAGTACGAGGTTGGCTTCAGTCTCCTaGCCCTCACCTCCCAGCCTTCCTCACCACCGCTTT +
Preference number: 6 (lower is better)
Translates to: QLLFSTRLASVS*PSPPSLPHHRF
Trigger: AAAGCGGTGGTGAGGAAGGCTGGGAGGTGAGGGGCAGGAGACTGAAGCCAACCTCGTACTGAAGAGCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524743.1
ENST00000542982.1
CDS CAA 72 bp CGTGTCCTCCTGAGCCAGGCACCTCATAGAATCTTCTaGCCTGTTCAGCAAGGCCTTCCAACCCTCCATCCA +
Preference number: 6 (lower is better)
Translates to: RVLLSQAPHRIF*PVQQGLPTLHP
Trigger: TGGATGGAGGGTTGGAAGGCCTTGCTGAACAGGCAAGAAGATTCTATGAGGTGCCTGGCTCAGGAGGACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000524743.1
ENST00000528087.1
ENST00000534515.1
ENST00000542982.1
CDS CAA 90 bp CCCTGGTCCAGGTTCTCTGGCCTAATGTGCTTCCATCGCAGCAGCTaGAGTGGAAAGGATGGGGTCTCTGGGTTTTTCTACCACTGCATC +
Preference number: 6 (lower is better)
Translates to: PWSRFSGLMCFHRSS*SGKDGVSGFFYHCI
Trigger: GATGCAGTGGTAGAAAAACCCAGAGACCCCATCCTTTCCACTCAAGCTGCTGCGATGGAAGCACATTAGGCCAGAGAACCTGGACCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532830.5