RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POLA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000014138

Ensembl transcript IDs: ENST00000265465.8, ENST00000525924.1, ENST00000527618.5, ENST00000527850.5, ENST00000532391.1, ENST00000532469.1, ENST00000533192.1, ENST00000534785.1

Found 403 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTaGCACCAGGACTCCAGCTTTGGAACAGCCCAGCGAGGCGGCCCC +
Preference number: 1 (lower is better)
Translates to: GLQASPGYCATWQSS*HQDSSFGTAQRGGP
Trigger: GGGGCCGCCTCGCTGGGCTGTTCCAAAGCTGGAGTCCTGGTGGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR TCA 90 bp GCCCCCTCCAGATGGAGAGGTCAGGCTGGGACCACAGCATGCATGTaGGGAACTGCGCAGGGAGGCCCAGGCATGCAGCCAGTTGCTTGC +
Preference number: 1 (lower is better)
Translates to: APSRWRGQAGTTACM*GTAQGGPGMQPVAC
Trigger: GCAAGCAACTGGCTGCATGCCTGGGCCTCCCTGCGCAGTTCCTCACATGCATGCTGTGGTCCCAGCCTGACCTCTCCATCTGGAGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR TCA 90 bp GAAAGGCGGCTGGGGGTACACAGGCTCATGGTGCACATCTCTCAATaGCGGGACAAAGACAAGGTGGGAGCCGGAGCTTCTTGTGCCTTC +
Preference number: 1 (lower is better)
Translates to: ERRLGVHRLMVHISQ*RDKDKVGAGASCAF
Trigger: GAAGGCACAAGAAGCTCCGGCTCCCACCTTGTCTTTGTCCCGTCATTGAGAGATGTGCACCATGAGCCTGTGTACCCCCAGCCGCCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR TCA 90 bp TGTAGCTCCCAGTTAGTGCCTCTGGACATCCCAAGACCTTCAGGCTaGTGTTTCCAGCTCCTCCTCTCCCAGACCAAGATACTCCCTGTG +
Preference number: 1 (lower is better)
Translates to: CSSQLVPLDIPRPSG*CFQLLLSQTKILPV
Trigger: CACAGGGAGTATCTTGGTCTGGGAGAGGAGGAGCTGGAAACATCAGCCTGAAGGTCTTGGGATGTCCAGAGGCACTAACTGGGAGCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CCA 90 bp GCATCCAGGAAAGGGCCAAACAGGATGCAGACATCTGGCCGGTCATaGTTGATGACAGCAATCAGGTCAAGCAGGGGGTCATACGTGATG +
Preference number: 1 (lower is better)
Translates to: ASRKGPNRMQTSGRS*LMTAIRSSRGSYVM
Trigger: CATCACGTATGACCCCCTGCTTGACCTGATTGCTGTCATCAACCATGACCGGCCAGATGTCTGCATCCTGTTTGGCCCTTTCCTGGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CCA 90 bp CAGGTCAAGCAGGGGGTCATACGTGATGCTGTCAGATGTGGTGTATaGTCCACAGGCAACCAGGACCATGCTTTGCTCAAAGTCTGCATC +
Preference number: 1 (lower is better)
Translates to: QVKQGVIRDAVRCGV*STGNQDHALLKVCI
Trigger: GATGCAGACTTTGAGCAAAGCATGGTCCTGGTTGCCTGTGGACCATACACCACATCTGACAGCATCACGTATGACCCCCTGCTTGACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR TCA 90 bp AATTTGAGCACCCGAGGAATGTTCCCGGTCTCCCTCGAGAATCACTaGCTTGTTGTTCAGCTTCCCGTTGCTATCACAGCCAATCTGGCC +
Preference number: 1 (lower is better)
Translates to: NLSTRGMFPVSLENH*LVVQLPVAITANLA
Trigger: GGCCAGATTGGCTGTGATAGCAACGGGAAGCTGAACAACAAGTCAGTGATTCTCGAGGGAGACCGGGAACATTCCTCGGGTGCTCAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR TCA 90 bp CAAACTGTACTTGCTTTTTGTCCTCTCGAGACAGATCGGAGTAGCTaGAAGGCGGCTGGGGGTACACAGGCTCATGGTGCACATCTCTCA +
Preference number: 1 (lower is better)
Translates to: QTVLAFCPLETDRSS*KAAGGTQAHGAHLS
Trigger: TGAGAGATGTGCACCATGAGCCTGTGTACCCCCAGCCGCCTTTCAGCTACTCCGATCTGTCTCGAGAGGACAAAAAGCAAGTACAGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CCA 90 bp TCTCCTTTCCCACCCAACTGTTCACCTTGTCACAGGGCTATGTCTTaGCTCTTGGCTAAGACTTTAAGGGCCCACACAGCAGAGAACAGC +
Preference number: 1 (lower is better)
Translates to: SPFPPNCSPCHRAMS*LLAKTLRAHTAENS
Trigger: GCTGTTCTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGCCCTGTGACAAGGTGAACAGTTGGGTGGGAAAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR CCA 90 bp CTGTCTGAAGTTCCGGAAGAACTACTGATCTCCTCGGCCCCCAGGTaGAAAAGCAGATCTGTGGATGTCAAGCCGAAGATCACTCCGTTT +
Preference number: 1 (lower is better)
Translates to: LSEVPEELLISSAPR*KSRSVDVKPKITPF
Trigger: AAACGGAGTGATCTTCGGCTTGACATCCACAGATCTGCTTTTCCACCTGGGGGCCGAGGAGATCAGTAGTTCTTCCGGAACTTCAGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR TCA 90 bp AGTGTACATATGAAATCTTCCCCAGGTCACCTCTATGTGGCCTGGTaGAAGCCCTCATTTGAGGGCCTTCCTAGTCATCTGGGCTCTCGT +
Preference number: 1 (lower is better)
Translates to: SVHMKSSPGHLYVAW*KPSFEGLPSHLGSR
Trigger: ACGAGAGCCCAGATGACTAGGAAGGCCCTCAAATGAGGGCTTTCACCAGGCCACATAGAGGTGACCTGGGGAAGATTTCATATGTACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR GCA 90 bp GATCTGTGGATGTCAAGCCGAAGATCACTCCGTTTATGGAGAGGCTaGAGGGCTCGGACACAAACTGTACTTGCTTTTTGTCCTCTCGAG +
Preference number: 1 (lower is better)
Translates to: DLWMSSRRSLRLWRG*RARTQTVLAFCPLE
Trigger: CTCGAGAGGACAAAAAGCAAGTACAGTTTGTGTCCGAGCCCTGCAGCCTCTCCATAAACGGAGTGATCTTCGGCTTGACATCCACAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR TCA 90 bp GGTCATATCAGAATTTGGGAGGCAGAGGACAGGCAAGTGTACATATaGAATCTTCCCCAGGTCACCTCTATGTGGCCTGGTGAAAGCCCT +
Preference number: 1 (lower is better)
Translates to: GHIRIWEAEDRQVYI*NLPQVTSMWPGESP
Trigger: AGGGCTTTCACCAGGCCACATAGAGGTGACCTGGGGAAGATTTCATATGTACACTTGCCTGTCCTCTGCCTCCCAAATTCTGATATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CCA 90 bp TTTGATTCATGTAGAAAATCACAAAGCCTTCTCGCCTTTTCTGAGTaGGCGGGATCCACAGCTGGCTTACTTCTGGACACGGAGCATGGA +
Preference number: 1 (lower is better)
Translates to: FDSCRKSQSLLAFSE*AGSTAGLLLDTEHG
Trigger: TCCATGCTCCGTGTCCAGAAGTAAGCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAGAAGGCTTTGTGATTTTCTACATGAATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR CCA 90 bp TCTTACAGGTCAGAACTTCTCGAATGTCTGGGAGCTTCTGAAACATaGATTTGTAGCTCCCAGTTAGTGCCTCTGGACATCCCAAGACCT +
Preference number: 1 (lower is better)
Translates to: SYRSELLECLGASET*ICSSQLVPLDIPRP
Trigger: AGGTCTTGGGATGTCCAGAGGCACTAACTGGGAGCTACAAATCCATGTTTCAGAAGCTCCCAGACATTCGAGAAGTTCTGACCTGTAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR TCA 90 bp GGAAACAGAGAATATTCCTTAAGCTCAGATAAATCCACTGGAATTTaGGCACCCGAGGAATGTTCCCGGTCTCCCTCGAGAATCACTGAC +
Preference number: 1 (lower is better)
Translates to: GNREYSLSSDKSTGI*APEECSRSPSRITD
Trigger: GTCAGTGATTCTCGAGGGAGACCGGGAACATTCCTCGGGTGCTCAAATTCCAGTGGATTTATCTGAGCTTAAGGAATATTCTCTGTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR GCA 90 bp GGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCACCAGAGAGGCAGGCCCGGCTaGACAAGTCCTCCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: GLQASPGYCATWQSSCHQRGRPG*TSPPCW
Trigger: CCAGCAGGGAGGACTTGTGCAGCCGGGCCTGCCTCT...CTGGTGGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR CCA 90 bp CAGCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCAGATGGAGAGGTCAGGCTGGCTGAGGCAGGAGAATaGCATGAACCCGGGCGGCAG +
Preference number: 2 (lower is better)
Translates to: QLWNSPARRPPPDGEVRLAEAGE*HEPGRQ
Trigger: CTGCCGCCCGGGTTCATGCCATTCTCCTGCCTCAGC...CAGCCTGACCTCTCCATCTGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR TCA 90 bp GTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCACCACAGCATGCATGTaGGGAACTGCGCAGGGAGGC +
Preference number: 2 (lower is better)
Translates to: VLGCRQALATARLGKAAATTACM*GTAQGG
Trigger: GCCTCCCTGCGCAGTTCCTCACATGCATGCTGTGGT...GGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR GCA 90 bp GAGTGTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCCCGGGCGGCAGAGCTTaGAGTGAGCCGAGATCTCAC +
Preference number: 2 (lower is better)
Translates to: ECSGLQASPGYCATWQSSPGGRA*SEPRSH
Trigger: GTGAGATCTCGGCTCACTGCAAGCTCTGCCGCCCGG...GCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAACACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR CCA 90 bp GGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCACCAGCCCACTGGACAGGACTaGGGCTGGATAGAAACCCAG +
Preference number: 2 (lower is better)
Translates to: GLQASPGYCATWQSSCHQPTGQD*GWIETQ
Trigger: CTGGGTTTCTATCCAGCCCCAGTCCTGTCCAGTGGG...CTGGTGGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR CCA 90 bp GAGTGTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCCCAGGACTCCAGCTTTaGAACAGCCCAGCGAGGCGG +
Preference number: 2 (lower is better)
Translates to: ECSGLQASPGYCATWQSSPGLQL*NSPARR
Trigger: CCGCCTCGCTGGGCTGTTCCAAAGCTGGAGTCCTGG...GCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAACACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR TCA 90 bp GGTTTGCCGGTCTTGGCTCTGGCATGTGAGGCAGGACAGCCTGCCAGCTTAGGGTCCACGTCTGGCCAGTaGCAGCTTTTCCCCAGATGC +
Preference number: 2 (lower is better)
Translates to: GLPVLALACEAGQPASLGSTSGQ*QLFPRC
Trigger: GCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGA...CCCTAAGCTGGCAGGCTGTCCTGCCTCACATGCCAGAGCCAAGACCGGCAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR GCA 90 bp GGTTTGCCGGTCTTGGCTCTGGCATGTGAGGCAGGACAGCCTGCCAGCTTAGGGCACCCAGTGCACCTCTaGAGCATAGAGGTCACTGGG +
Preference number: 2 (lower is better)
Translates to: GLPVLALACEAGQPASLGHPVHL*SIEVTG
Trigger: CCCAGTGACCTCTATGCTGCAGAGGTGCACTGGGTG...CCCTAAGCTGGCAGGCTGTCCTGCCTCACATGCCAGAGCCAAGACCGGCAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR GCA 90 bp CAGGAAGCCACTCCACGTCTGGCCAGTGACAGCTTTTCCCCAGATGCCAGGACAGCAAGCCCTGGCTACTaGGCGACTTGGCAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: QEATPRLASDSFSPDARTASPGY*ATWQSS
Trigger: GCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGC...TGTCCTGGCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGAGTGGCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR TCA 90 bp GGGCAGGAAGCCACTCCACGTCTGGCCAGTGACAGCTTTTCCCCAGATGCCAGGACACGGAGCATGGACTaGGAAGCAAGAGCTTCCTTC +
Preference number: 2 (lower is better)
Translates to: GQEATPRLASDSFSPDARTRSMD*EARASF
Trigger: GAAGGAAGCTCTTGCTTCTCAGTCCATGCTCCGTGT...CCTGGCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGAGTGGCTTCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR TCA 90 bp GGGCAGGAAGCCACTCCACGTCTGGCCAGTGACAGCTTTTCCCCAGATGCCAGGGATAGAAACCCAGTGTaGCTGACACTCTGCCTTCTC +
Preference number: 2 (lower is better)
Translates to: GQEATPRLASDSFSPDARDRNPV*LTLCLL
Trigger: GAGAAGGCAGAGTGTCAGTCACACTGGGTTTCTATC...CCTGGCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGAGTGGCTTCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR TCA 90 bp GGATGTCAAGCCGAAGATCACTCCGTTTATGGAGAGGCTGCAGGGCTCGGACACACAGATCGGAGTAGCTaGAAGGCGGCTGGGGGTACA +
Preference number: 2 (lower is better)
Translates to: GCQAEDHSVYGEAAGLGHTDRSS*KAAGGT
Trigger: TGTACCCCCAGCCGCCTTTCAGCTACTCCGATCTGT...GTGTCCGAGCCCTGCAGCCTCTCCATAAACGGAGTGATCTTCGGCTTGACATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CCA 90 bp CAGGAAGCCACTCCACGTCTGGCCAGTGACAGCTTTTCCCCAGATGCCAGGACAGGACAGGACTGGGGCTaGATAGAAACCCAGTGTGAC +
Preference number: 2 (lower is better)
Translates to: QEATPRLASDSFSPDARTGQDWG*IETQCD
Trigger: GTCACACTGGGTTTCTATCCAGCCCCAGTCCTGTCC...TGTCCTGGCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGAGTGGCTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR CCA 90 bp CCTGGTCAGGTCTGGGGCTCGATTCCATTTCACCGTCAGAAAGGTGAGAGGCAATGCCGGTCTTGGCTCTaGCATGTGAGGCAGGACAGC +
Preference number: 2 (lower is better)
Translates to: PGQVWGSIPFHRQKGERQCRSWL*HVRQDS
Trigger: GCTGTCCTGCCTCACATGCCAGAGCCAAGACCGGCA...TTGCCTCTCACCTTTCTGACGGTGAAATGGAATCGAGCCCCAGACCTGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR CCA 90 bp TGTACCCTGGTCAGGTCTGGGGCTCGATTCCATTTCACCGTCAGAAAGGTGAGACCCTGCCCTGACAGCTaGGGTTTGCCGGTCTTGGCT +
Preference number: 2 (lower is better)
Translates to: CTLVRSGARFHFTVRKVRPCPDS*GLPVLA
Trigger: AGCCAAGACCGGCAAACCCCAGCTGTCAGGGCAGGG...TCTCACCTTTCTGACGGTGAAATGGAATCGAGCCCCAGACCTGACCAGGGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR TCA 90 bp GAGTGTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTCCTGGCTAACATGGTaGAACCCCATCTCCACTAAA +
Preference number: 2 (lower is better)
Translates to: ECSGLQASPGYCATWQSSSWLTW*NPISTK
Trigger: TTTAGTGGAGATGGGGTTTCACCATGTTAGCCAGGA...GCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAACACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR TCA 90 bp CAGGAAGCCACTCCACGTCTGGCCAGTGACAGCTTTTCCCCAGATGCCAGGACAGAAACCCAGTGTGACTaGCACTCTGCCTTCTCTGGA +
Preference number: 2 (lower is better)
Translates to: QEATPRLASDSFSPDARTETQCD*HSAFSG
Trigger: TCCAGAGAAGGCAGAGTGTCAGTCACACTGGGTTTC...TGTCCTGGCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGAGTGGCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR TCA 90 bp CAGACATCTGGCCGGTCATGGTTGATGACAGCAATCAGGTCAAGCAGGGGGTCAGACGGTGAGAGTAGCTaGTGGGGGCTACGAGTTGAC +
Preference number: 2 (lower is better)
Translates to: QTSGRSWLMTAIRSSRGSDGESS*WGLRVD
Trigger: GTCAACTCGTAGCCCCCATCAGCTACTCTCACCGTC...TGACCCCCTGCTTGACCTGATTGCTGTCATCAACCATGACCGGCCAGATGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR TCA 90 bp AGTTGTTTGTTTTCTGGTCCCACCACCTCCCCAAAGAAACAAGGCCACAGGGCACCCATCCCCATCAGCTaGCCCATGAGGGGTGAGTGC +
Preference number: 2 (lower is better)
Translates to: SCLFSGPTTSPKKQGHRAPIPIS*PMRGEC
Trigger: GCACTCACCCCTCATGGGTCAGCTGATGGGGATGGG...TGCCCTGTGGCCTTGTTTCTTTGGGGAGGTGGTGGGACCAGAAAACAAACAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR GCA 90 bp CCTGGTCAGGTCTGGGGCTCGATTCCATTTCACCGTCAGAAAGGTGAGAGGCAAAGGCATGCAGCCAGTTaGTTGCTCTGCAGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: PGQVWGSIPFHRQKGERQRHAAS*LLCSPA
Trigger: AGCTGGGCTGCAGAGCAAGCAACTGGCTGCATGCCT...TTGCCTCTCACCTTTCTGACGGTGAAATGGAATCGAGCCCCAGACCTGACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR CCA 90 bp TGTACCCTGGTCAGGTCTGGGGCTCGATTCCATTTCACCGTCAGAAAGGTGAGACTCGCCTTTTCTGAGTaGGCGGGATCCACAGCTGGC +
Preference number: 2 (lower is better)
Translates to: CTLVRSGARFHFTVRKVRLAFSE*AGSTAG
Trigger: GCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAG...TCTCACCTTTCTGACGGTGAAATGGAATCGAGCCCCAGACCTGACCAGGGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR CCA 90 bp CGGCCCCCAGGTGGAAAAGCAGATCTGTGGATGTCAAGCCGAAGATCACTCCGTCTATCACAGCCAATCTaGCCCAGCAGAGTGACAGGC +
Preference number: 2 (lower is better)
Translates to: RPPGGKADLWMSSRRSLRLSQPI*PSRVTG
Trigger: GCCTGTCACTCTGCTGGGCCAGATTGGCTGTGATAG...ACGGAGTGATCTTCGGCTTGACATCCACAGATCTGCTTTTCCACCTGGGGGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CAA 90 bp TCCCGGTCTCCCTCGAGAATCACTGACTTGTTGTTCAGCTTCCCGTaGCTATCACAGCCAATCTGGCCCAGCAGAGTGACAGGCTCCTGT +
Preference number: 2 (lower is better)
Translates to: SRSPSRITDLLFSFP*LSQPIWPSRVTGSC
Trigger: ACAGGAGCCTGTCACTCTGCTGGGCCAGATTGGCTGTGATAGCAACGGGAAGCTGAACAACAAGTCAGTGATTCTCGAGGGAGACCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CAA 90 bp AATCTTCCCCAGGTCACCTCTATGTGGCCTGGTGAAAGCCCTCATTaGAGGGCCTTCCTAGTCATCTGGGCTCTCGTTCTCTTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: NLPQVTSMWPGESPH*RAFLVIWALVLLGR
Trigger: CCTCCCCAAGAGAACGAGAGCCCAGATGACTAGGAAGGCCCTCAAATGAGGGCTTTCACCAGGCCACATAGAGGTGACCTGGGGAAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CAA 90 bp TCCAGGAAAGGGCCAAACAGGATGCAGACATCTGGCCGGTCATGGTaGATGACAGCAATCAGGTCAAGCAGGGGGTCATACGTGATGCTG +
Preference number: 2 (lower is better)
Translates to: SRKGPNRMQTSGRSW*MTAIRSSRGSYVML
Trigger: CAGCATCACGTATGACCCCCTGCTTGACCTGATTGCTGTCATCAACCATGACCGGCCAGATGTCTGCATCCTGTTTGGCCCTTTCCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CCA 90 bp GGATGTCAAGCCGAAGATCACTCCGTTTATGGAGAGGCTGCAGGGCTCGGACACGGGTACACAGGCTCATaGTGCACATCTCTCAATGAC +
Preference number: 2 (lower is better)
Translates to: GCQAEDHSVYGEAAGLGHGYTGS*CTSLND
Trigger: GTCATTGAGAGATGTGCACCATGAGCCTGTGTACCC...GTGTCCGAGCCCTGCAGCCTCTCCATAAACGGAGTGATCTTCGGCTTGACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CAA 90 bp TTCCCACCCAACTGTTCACCTTGTCACAGGGCTATGTCTTGGCTCTaGGCTAAGACTTTAAGGGCCCACACAGCAGAGAACAGCAGAGGA +
Preference number: 2 (lower is better)
Translates to: FPPNCSPCHRAMSWL*AKTLRAHTAENSRG
Trigger: TCCTCTGCTGTTCTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGCCCTGTGACAAGGTGAACAGTTGGGTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR TCA 90 bp TGTGGATGTCAAGCCGAAGATCACTCCGTTTATGGAGAGGCTGCAGGGCTCGGAAAATCCACTGGAATTTaGGCACCCGAGGAATGTTCC +
Preference number: 2 (lower is better)
Translates to: CGCQAEDHSVYGEAAGLGKSTGI*APEECS
Trigger: GGAACATTCCTCGGGTGCTCAAATTCCAGTGGATTT...TCCGAGCCCTGCAGCCTCTCCATAAACGGAGTGATCTTCGGCTTGACATCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR GCA 90 bp CAGACATCTGGCCGGTCATGGTTGATGACAGCAATCAGGTCAAGCAGGGGGTCAACCAGGACCATGCTTTaGTCAAAGTCTGCATCCTCT +
Preference number: 2 (lower is better)
Translates to: QTSGRSWLMTAIRSSRGSTRTML*SKSASS
Trigger: AGAGGATGCAGACTTTGAGCAAAGCATGGTCCTGGT...TGACCCCCTGCTTGACCTGATTGCTGTCATCAACCATGACCGGCCAGATGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR GCA 90 bp AGTTGTTTGTTTTCTGGTCCCACCACCTCCCCAAAGAAACAAGGCCACAGGGCAAAGGGCCAAACAGGATaGAGACATCTGGCCGGTCAT +
Preference number: 2 (lower is better)
Translates to: SCLFSGPTTSPKKQGHRAKGQTG*RHLAGH
Trigger: ATGACCGGCCAGATGTCTGCATCCTGTTTGGCCCTT...TGCCCTGTGGCCTTGTTTCTTTGGGGAGGTGGTGGGACCAGAAAACAAACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CCA 90 bp CCACAGGCAACCAGGACCATGCTTTGCTCAAAGTCTGCATCCTCTTCAGTGGGCCACCCTCGTAGAGTTTaGTGGCAACAAGTTTCCTAC +
Preference number: 2 (lower is better)
Translates to: PQATRTMLCSKSASSSVGHPRRV*WQQVSY
Trigger: GTAGGAAACTTGTTGCCACCAAACTCTACGAGGGTG...GCCCACTGAAGAGGATGCAGACTTTGAGCAAAGCATGGTCCTGGTTGCCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CCA 90 bp CTAACTCCAAGGCAGGCAGGGCTAAAGGGTGGCAGAGATCAAAATGACCCAATATCCTCGGCCCCCAGGTaGAAAAGCAGATCTGTGGAT +
Preference number: 2 (lower is better)
Translates to: LTPRQAGLKGGRDQNDPISSAPR*KSRSVD
Trigger: ATCCACAGATCTGCTTTTCCACCTGGGGGCCGAGGA...TATTGGGTCATTTTGATCTCTGCCACCCTTTAGCCCTGCCTGCCTTGGAGTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR TCA 90 bp GACAGCAATCAGGTCAAGCAGGGGGTCATACGTGATGCTGTCAGATGTGGTGTATCCCTCGAGAATCACTaGCTTGTTGTTCAGCTTCCC +
Preference number: 2 (lower is better)
Translates to: DSNQVKQGVIRDAVRCGVSLENH*LVVQLP
Trigger: GGGAAGCTGAACAACAAGTCAGTGATTCTCGAGGGA...TACACCACATCTGACAGCATCACGTATGACCCCCTGCTTGACCTGATTGCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR TCA 90 bp AGTTGTTTGTTTTCTGGTCCCACCACCTCCCCAAAGAAACAAGGCCACAGGGCAGTGCACATCTCTCAATaGCGGGACAAAGACAAGGTG +
Preference number: 2 (lower is better)
Translates to: SCLFSGPTTSPKKQGHRAVHISQ*RDKDKV
Trigger: CACCTTGTCTTTGTCCCGTCATTGAGAGATGTGCAC...TGCCCTGTGGCCTTGTTTCTTTGGGGAGGTGGTGGGACCAGAAAACAAACAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CCA 90 bp ATCCAGGAAAGGGCCAAACAGGATGCAGACATCTGGCCGGTCATGGTTGATGACAGTGGGCTGATAAAATaGAAGTGGCACACCCTCGTA +
Preference number: 2 (lower is better)
Translates to: IQERAKQDADIWPVMVDDSGLIK*KWHTLV
Trigger: TACGAGGGTGTGCCACTTCCATTTTATCAGCCCACT...GTCATCAACCATGACCGGCCAGATGTCTGCATCCTGTTTGGCCCTTTCCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CCA 90 bp CTGTGCGTAAACATAGAACGACTCATAGTCAATGGCCATGTCTTCTTGGGGCGGGTCAGATGTGGTGTATaGTCCACAGGCAACCAGGAC +
Preference number: 2 (lower is better)
Translates to: LCVNIERLIVNGHVFLGRVRCGV*STGNQD
Trigger: GTCCTGGTTGCCTGTGGACCATACACCACATCTGAC...CCGCCCCAAGAAGACATGGCCATTGACTATGAGTCGTTCTATGTTTACGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CAA 90 bp GCTAAGCCGAAGGAGGTAACCACTTCTCCTCGGTTACTTCGTGAGTaGTATTTCTGGGAGGGAGTAGCACTTGGAGAGAAACTTGACGGT +
Preference number: 2 (lower is better)
Translates to: AKPKEVTTSPRLLRE*YFWEGVALGEKLDG
Trigger: ACCGTCAAGTTTCTCTCCAAGTGCTACTCCCTCCCAGAAATACAACTCACGAAGTAACCGAGGAGAAGTGGTTACCTCCTTCGGCTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR TCA 90 bp GTTAGTGCCTCTGGACATCCCAAGACCTTCAGGCTGATGTTTCCAGCTCCTCCTCTTCTGAGAACCCTTTaGAGGTGTGGTGTAAGAGTT +
Preference number: 2 (lower is better)
Translates to: VSASGHPKTFRLMFPAPPLLRTL*RCGVRV
Trigger: AACTCTTACACCACACCTTCAAAGGGTTCTCAGAAG...AGGAGGAGCTGGAAACATCAGCCTGAAGGTCTTGGGATGTCCAGAGGCACTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR TCA 90 bp CCACAGGCAACCAGGACCATGCTTTGCTCAAAGTCTGCATCCTCTTCAGTGGGCGGGCTAGCAAAGGAGTaGAAGCTTCAATCTTGTAAT +
Preference number: 2 (lower is better)
Translates to: PQATRTMLCSKSASSSVGGLAKE*KLQSCN
Trigger: ATTACAAGATTGAAGCTTTCACTCCTTTGCTAGCCC...GCCCACTGAAGAGGATGCAGACTTTGAGCAAAGCATGGTCCTGGTTGCCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR GCA 90 bp GGCAGAGGACAGGCAAGTGTACATATGAAATCTTCCCCAGGTCACCTCTATGTGAATGTCTCTAGCTCCTaGATGGCCACTGTCCTTGCA +
Preference number: 2 (lower is better)
Translates to: GRGQASVHMKSSPGHLYVNVSSS*MATVLA
Trigger: TGCAAGGACAGTGGCCATGCAGGAGCTAGAGACATT...CACATAGAGGTGACCTGGGGAAGATTTCATATGTACACTTGCCTGTCCTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR GCA 90 bp GACAGCAATCAGGTCAAGCAGGGGGTCATACGTGATGCTGTCAGATGTGGTGTAAGGCAACCAGGACCATaGTTTGCTCAAAGTCTGCAT +
Preference number: 2 (lower is better)
Translates to: DSNQVKQGVIRDAVRCGVRQPGP*FAQSLH
Trigger: ATGCAGACTTTGAGCAAAGCATGGTCCTGGTTGCCT...TACACCACATCTGACAGCATCACGTATGACCCCCTGCTTGACCTGATTGCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CCA 90 bp GTTGTTCAGCTTCCCGTTGCTATCACAGCCAATCTGGCCCAGCAGAGTGACAGGAACTTCTCGAATGTCTaGGAGCTTCTGAAACATGGA +
Preference number: 2 (lower is better)
Translates to: VVQLPVAITANLAQQSDRNFSNV*ELLKHG
Trigger: TCCATGTTTCAGAAGCTCCCAGACATTCGAGAAGTT...CCTGTCACTCTGCTGGGCCAGATTGGCTGTGATAGCAACGGGAAGCTGAACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CCA 90 bp CTGGTGTTTCTGGGAAAAAGCAGAGTTCAAACCTACCTTCACGAAGTACCTCAGGGGACAAAGACAAGGTaGGAGCCGGAGCTTCTTGTG +
Preference number: 2 (lower is better)
Translates to: LVFLGKSRVQTYLHEVPQGTKTR*EPELLV
Trigger: CACAAGAAGCTCCGGCTCCCACCTTGTCTTTGTCCC...CTGAGGTACTTCGTGAAGGTAGGTTTGAACTCTGCTTTTTCCCAGAAACACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CCA 90 bp AGTTGTTTGTTTTCTGGTCCCACCACCTCCCCAAAGAAACAAGGCCACAGGGCAGGGAAAGTCAAAGACTaGGTTCTGGTGTTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: SCLFSGPTTSPKKQGHRAGKVKD*VLVFLG
Trigger: TCCCAGAAACACCAGAACCCAGTCTTTGACTTTCCC...TGCCCTGTGGCCTTGTTTCTTTGGGGAGGTGGTGGGACCAGAAAACAAACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR GCA 90 bp TCGTTCTCTTGGGGAGGGAGGAGAGGACACTGTTTACTCAAGCATTTTACTGACGGTGACAGGCAGCTGTaGGTAAACATAGAACGACTC +
Preference number: 2 (lower is better)
Translates to: SFSWGGRRGHCLLKHFTDGDRQL*VNIERL
Trigger: GAGTCGTTCTATGTTTACGCACAGCTGCCTGTCACC...GTCAGTAAAATGCTTGAGTAAACAGTGTCCTCTCCTCCCTCCCCAAGAGAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CCA 90 bp GCTCGGACACAAACTGTACTTGCTTTTTGTCCTCTCGAGACAGATCGGAGTAGCCGTGAGTTGTATTTCTaGGAGGGAGTAGCACTTGGA +
Preference number: 2 (lower is better)
Translates to: ARTQTVLAFCPLETDRSSRELYF*EGVALG
Trigger: TCCAAGTGCTACTCCCTCCCAGAAATACAACTCACG...GCTACTCCGATCTGTCTCGAGAGGACAAAAAGCAAGTACAGTTTGTGTCCGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CCA 90 bp CTAACTCCAAGGCAGGCAGGGCTAAAGGGTGGCAGAGATCAAAATGACCCAATACCTCGTAGAGTTTGGTaGCAACAAGTTTCCTACCAG +
Preference number: 2 (lower is better)
Translates to: LTPRQAGLKGGRDQNDPIPRRVW*QQVSYQ
Trigger: CTGGTAGGAAACTTGTTGCCACCAAACTCTACGAGG...TATTGGGTCATTTTGATCTCTGCCACCCTTTAGCCCTGCCTGCCTTGGAGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CCA 90 bp CGTGATGCTGTCAGATGTGGTGTATGGTCCACAGGCAACCAGGACCATGCTTTGCTGATAAAATGGAAGTaGCACACCCTCGTAGAGTTT +
Preference number: 2 (lower is better)
Translates to: RDAVRCGVWSTGNQDHALLIKWK*HTLVEF
Trigger: AAACTCTACGAGGGTGTGCCACTTCCATTTTATCAG...CAAAGCATGGTCCTGGTTGCCTGTGGACCATACACCACATCTGACAGCATCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CAA 90 bp TTCAAGGTATTCCCAGCTGAGCCCACTTGGAGGTCATATCAGAATTaGGGAGGCAGAGGACAGGCAAGTGTACATATGAAATCTTCCCCA +
Preference number: 2 (lower is better)
Translates to: FKVFPAEPTWRSYQN*GGRGQASVHMKSSP
Trigger: TGGGGAAGATTTCATATGTACACTTGCCTGTCCTCTGCCTCCCAAATTCTGATATGACCTCCAAGTGGGCTCAGCTGGGAATACCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR TCA 90 bp CCGGAGCTTCTTGTGCCTTCAATAATTGTTCGTAGACACTGCTTGAAAATGTCTGCAGGGGGTCATACGTaGTGCTGTCAGATGTGGTGT +
Preference number: 2 (lower is better)
Translates to: PELLVPSIIVRRHCLKMSAGGHT*CCQMWC
Trigger: ACACCACATCTGACAGCATCACGTATGACCCCCTGC...AGACATTTTCAAGCAGTGTCTACGAACAATTATTGAAGGCACAAGAAGCTCCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CCA 90 bp CTGTGCGTAAACATAGAACGACTCATAGTCAATGGCCATGTCTTCTTGGGGCGGCTGCATCCTCTTCAGTaGGCTGATAAAATGGAAGTG +
Preference number: 2 (lower is better)
Translates to: LCVNIERLIVNGHVFLGRLHPLQ*ADKMEV
Trigger: CACTTCCATTTTATCAGCCCACTGAAGAGGATGCAG...CCGCCCCAAGAAGACATGGCCATTGACTATGAGTCGTTCTATGTTTACGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR TCA 90 bp CTAACTCCAAGGCAGGCAGGGCTAAAGGGTGGCAGAGATCAAAATGACCCAATATCTTGTAATGTTCCTTaGGTTCGCTGCCAAGTTCTT +
Preference number: 2 (lower is better)
Translates to: LTPRQAGLKGGRDQNDPISCNVP*VRCQVL
Trigger: AAGAACTTGGCAGCGAACTCAAGGAACATTACAAGA...TATTGGGTCATTTTGATCTCTGCCACCCTTTAGCCCTGCCTGCCTTGGAGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR TCA 90 bp TTTCCTACCAGTGGTGTTGATTCCTTCCATAATTACAACCTGTCCAGGAAACAGGAGATAGCTCGCTTCTaGGAACCCTTTGAAGGTGTG +
Preference number: 2 (lower is better)
Translates to: FPTSGVDSFHNYNLSRKQEIARF*EPFEGV
Trigger: CACACCTTCAAAGGGTTCTCAGAAGCGAGCTATCTC...CTGTTTCCTGGACAGGTTGTAATTATGGAAGGAATCAACACCACTGGTAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CCA 90 bp AAGATGTGCTTGAGTATTCGGCTGAATCTGTCTGAAGTTCCGGAAGAACTACTGGGAGCTTCTGAAACATaGATTTGTAGCTCCCAGTTA +
Preference number: 2 (lower is better)
Translates to: KMCLSIRLNLSEVPEELLGASET*ICSSQL
Trigger: TAACTGGGAGCTACAAATCCATGTTTCAGAAGCTCC...CAGTAGTTCTTCCGGAACTTCAGACAGATTCAGCCGAATACTCAAGCACATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CCA 90 bp CCGGAGCTTCTTGTGCCTTCAATAATTGTTCGTAGACACTGCTTGAAAATGTCTAACCCTTTGAAGGTGTaGTGTAAGAGTTCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: PELLVPSIIVRRHCLKMSNPLKV*CKSSRG
Trigger: TCCTCTTGAACTCTTACACCACACCTTCAAAGGGTT...AGACATTTTCAAGCAGTGTCTACGAACAATTATTGAAGGCACAAGAAGCTCCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CCA 72 bp CACTTCCCTGCCCTGACAGCTGGGGTTTGCCGGTCTTaGCTCTGGCATGTGAGGCAGGACAGCCTGCCAGCT +
Preference number: 3 (lower is better)
Translates to: HFPALTAGVCRS*LWHVRQDSLPA
Trigger: AGCTGGCAGGCTGTCCTGCCTCACATGCCAGAGCCAAGACCGGCAAACCCCAGCTGTCAGGGCAGGGAAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR TCA 72 bp AGATGGAGAGGTCAGGCTGGGACCACAGCATGCATGTaGGGAACTGCGCAGGGAGGCCCAGGCATGCAGCCA +
Preference number: 3 (lower is better)
Translates to: RWRGQAGTTACM*GTAQGGPGMQP
Trigger: TGGCTGCATGCCTGGGCCTCCCTGCGCAGTTCCTCACATGCATGCTGTGGTCCCAGCCTGACCTCTCCATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR GCA 72 bp GCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTaGCACCAGGACTCCAGCTTTGGAACAGCCCAGCGA +
Preference number: 3 (lower is better)
Translates to: ASPGYCATWQSS*HQDSSFGTAQR
Trigger: TCGCTGGGCTGTTCCAAAGCTGGAGTCCTGGTGGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR GCA 72 bp TCTGAGTGTTCTGGGCTGCAGGCAAGCCCTGGCTACTaGGCGACTTGGCAAAGCAGCTGCCACCAGGACTCC +
Preference number: 3 (lower is better)
Translates to: SECSGLQASPGY*ATWQSSCHQDS
Trigger: GGAGTCCTGGTGGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAACACTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR CAA 90 bp GAGTGTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCCATGCAGCCAGTTGCTaGCTCTGCAGCCCAGCTCTA +
Preference number: 3 (lower is better)
Translates to: ECSGLQASPGYCATWQSSHAASC*LCSPAL
Trigger: TAGAGCTGGGCTGCAGAGCAAGCAACTGGCTGCATG...GCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAACACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR TCA 72 bp CCCAGATGCCAGGACATAGGGGCATGGGACGTGCTGTaGACCCTGGAAGGCCTGACCCTGTCTGAGTGTTCT +
Preference number: 3 (lower is better)
Translates to: PRCQDIGAWDVL*TLEGLTLSECS
Trigger: AGAACACTCAGACAGGGTCAGGCCTTCCAGGGTTCACAGCACGTCCCATGCCCCTATGTCCTGGCATCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR-3UTR CAA 90 bp GTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCACCCAACTGTTCACCTaGTCACAGGGCTATGTCTTG +
Preference number: 3 (lower is better)
Translates to: VLGCRQALATARLGKAAATQLFT*SQGYVL
Trigger: CAAGACATAGCCCTGTGACAAGGTGAACAGTTGGGT...GGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR CCA 72 bp GGGATCCACAGCTGGCTTACTTCTGGACACGGAGCATaGACTGAGAAGCAAGAGCTTCCTTCCAGGAGAGGC +
Preference number: 3 (lower is better)
Translates to: GIHSWLTSGHGA*TEKQELPSRRG
Trigger: GCCTCTCCTGGAAGGAAGCTCTTGCTTCTCAGTCCATGCTCCGTGTCCAGAAGTAAGCCAGCTGTGGATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR TCA 72 bp CTTGCTTTTTGTCCTCTCGAGACAGATCGGAGTAGCTaGAAGGCGGCTGGGGGTACACAGGCTCATGGTGCA +
Preference number: 3 (lower is better)
Translates to: LAFCPLETDRSS*KAAGGTQAHGA
Trigger: TGCACCATGAGCCTGTGTACCCCCAGCCGCCTTTCAGCTACTCCGATCTGTCTCGAGAGGACAAAAAGCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CAA 90 bp GGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCACCAGAATAGGCAACATTCTTaGTCTACTACCAGGATAAAG +
Preference number: 3 (lower is better)
Translates to: GLQASPGYCATWQSSCHQNRQHS*STTRIK
Trigger: CTTTATCCTGGTAGTAGACAAAGAATGTTGCCTATT...CTGGTGGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR TCA 72 bp ACCCGAGGAATGTTCCCGGTCTCCCTCGAGAATCACTaGCTTGTTGTTCAGCTTCCCGTTGCTATCACAGCC +
Preference number: 3 (lower is better)
Translates to: TRGMFPVSLENH*LVVQLPVAITA
Trigger: GGCTGTGATAGCAACGGGAAGCTGAACAACAAGTCAGTGATTCTCGAGGGAGACCGGGAACATTCCTCGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CCA 72 bp AAAGGGCCAAACAGGATGCAGACATCTGGCCGGTCATaGTTGATGACAGCAATCAGGTCAAGCAGGGGGTCA +
Preference number: 3 (lower is better)
Translates to: KGPNRMQTSGRS*LMTAIRSSRGS
Trigger: TGACCCCCTGCTTGACCTGATTGCTGTCATCAACCATGACCGGCCAGATGTCTGCATCCTGTTTGGCCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CAA 90 bp GGATGTCAAGCCGAAGATCACTCCGTTTATGGAGAGGCTGCAGGGCTCGGACACGATGGGGGCTACGAGTaGACACACTCCTTTTTGTTA +
Preference number: 3 (lower is better)
Translates to: GCQAEDHSVYGEAAGLGHDGGYE*THSFLL
Trigger: TAACAAAAAGGAGTGTGTCAACTCGTAGCCCCCATC...GTGTCCGAGCCCTGCAGCCTCTCCATAAACGGAGTGATCTTCGGCTTGACATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CAA 90 bp GGATGTCAAGCCGAAGATCACTCCGTTTATGGAGAGGCTGCAGGGCTCGGACACCACTTGGAGAGAAACTaGACGGTGAGAGTAGCTGAT +
Preference number: 3 (lower is better)
Translates to: GCQAEDHSVYGEAAGLGHHLERN*TVRVAD
Trigger: ATCAGCTACTCTCACCGTCAAGTTTCTCTCCAAGTG...GTGTCCGAGCCCTGCAGCCTCTCCATAAACGGAGTGATCTTCGGCTTGACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR GCA 72 bp CAGATGTGGTGTATGGTCCACAGGCAACCAGGACCATaGTTTGCTCAAAGTCTGCATCCTCTTCAGTGGGCT +
Preference number: 3 (lower is better)
Translates to: QMWCMVHRQPGP*FAQSLHPLQWA
Trigger: AGCCCACTGAAGAGGATGCAGACTTTGAGCAAAGCATGGTCCTGGTTGCCTGTGGACCATACACCACATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CCA 72 bp CCACCCAACTGTTCACCTTGTCACAGGGCTATGTCTTaGCTCTTGGCTAAGACTTTAAGGGCCCACACAGCA +
Preference number: 3 (lower is better)
Translates to: PPNCSPCHRAMS*LLAKTLRAHTA
Trigger: TGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGCCCTGTGACAAGGTGAACAGTTGGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR CCA 72 bp CAGGGGGTCATACGTGATGCTGTCAGATGTGGTGTATaGTCCACAGGCAACCAGGACCATGCTTTGCTCAAA +
Preference number: 3 (lower is better)
Translates to: QGVIRDAVRCGV*STGNQDHALLK
Trigger: TTTGAGCAAAGCATGGTCCTGGTTGCCTGTGGACCATACACCACATCTGACAGCATCACGTATGACCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CCA 72 bp AGCATCCAGGAAAGGGCCAAACAGGATGCAGACATCTaGCCGGTCATGGTTGATGACAGCAATCAGGTCAAG +
Preference number: 3 (lower is better)
Translates to: SIQERAKQDADI*PVMVDDSNQVK
Trigger: CTTGACCTGATTGCTGTCATCAACCATGACCGGCCAGATGTCTGCATCCTGTTTGGCCCTTTCCTGGATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CAA 90 bp CCACAGGCAACCAGGACCATGCTTTGCTCAAAGTCTGCATCCTCTTCAGTGGGCCGGTTACTTCGTGAGTaGTATTTCTGGGAGGGAGTA +
Preference number: 3 (lower is better)
Translates to: PQATRTMLCSKSASSSVGRLLRE*YFWEGV
Trigger: TACTCCCTCCCAGAAATACAACTCACGAAGTAACCG...GCCCACTGAAGAGGATGCAGACTTTGAGCAAAGCATGGTCCTGGTTGCCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CAA 90 bp TGTGGATGTCAAGCCGAAGATCACTCCGTTTATGGAGAGGCTGCAGGGCTCGGATCGAGAATCACTGACTaGTTGTTCAGCTTCCCGTTG +
Preference number: 3 (lower is better)
Translates to: CGCQAEDHSVYGEAAGLGSRITD*LFSFPL
Trigger: CAACGGGAAGCTGAACAACAAGTCAGTGATTCTCGA...TCCGAGCCCTGCAGCCTCTCCATAAACGGAGTGATCTTCGGCTTGACATCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR TCA 72 bp GCCGAAGGAGGTAACCACTTCTCCTCGGTTACTTCGTaGGTTGTATTTCTGGGAGGGAGTAGCACTTGGAGA +
Preference number: 3 (lower is better)
Translates to: AEGGNHFSSVTS*VVFLGGSSTWR
Trigger: TCTCCAAGTGCTACTCCCTCCCAGAAATACAACTCACGAAGTAACCGAGGAGAAGTGGTTACCTCCTTCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR TCA 72 bp GGTCAAGATGTGCTTGAGTATTCGGCTGAATCTGTCTaGAGTTCCGGAAGAACTACTGATCTCCTCGGCCCC +
Preference number: 3 (lower is better)
Translates to: GQDVLEYSAESV*SSGRTTDLLGP
Trigger: GGGGCCGAGGAGATCAGTAGTTCTTCCGGAACTTCAGACAGATTCAGCCGAATACTCAAGCACATCTTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR TCA 72 bp ATGAAATCTTCCCCAGGTCACCTCTATGTGGCCTGGTaGAAGCCCTCATTTGAGGGCCTTCCTAGTCATCTG +
Preference number: 3 (lower is better)
Translates to: MKSSPGHLYVAW*KPSFEGLPSHL
Trigger: CAGATGACTAGGAAGGCCCTCAAATGAGGGCTTTCACCAGGCCACATAGAGGTGACCTGGGGAAGATTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR GCA 72 bp CGGGATGATGAGGACATCTGGGGTGACAGGCAGCTGTaGGTAAACATAGAACGACTCATAGTCAATGGCCAT +
Preference number: 3 (lower is better)
Translates to: RDDEDIWGDRQL*VNIERLIVNGH
Trigger: ATGGCCATTGACTATGAGTCGTTCTATGTTTACGCACAGCTGCCTGTCACCCCAGATGTCCTCATCATCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CCA 72 bp TGTAGAAAATCACAAAGCCTTCTCGCCTTTTCTGAGTaGGCGGGATCCACAGCTGGCTTACTTCTGGACACG +
Preference number: 3 (lower is better)
Translates to: CRKSQSLLAFSE*AGSTAGLLLDT
Trigger: CGTGTCCAGAAGTAAGCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAGAAGGCTTTGTGATTTTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR CCA 72 bp GCAGCTGTGCGTAAACATAGAACGACTCATAGTCAATaGCCATGTCTTCTTGGGGCGGGTAGAGTGGGTAGT +
Preference number: 3 (lower is better)
Translates to: AAVRKHRTTHSQ*PCLLGAGRVGS
Trigger: ACTACCCACTCTACCCGCCCCAAGAAGACATGGCCATTGACTATGAGTCGTTCTATGTTTACGCACAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR TCA 72 bp AGAATTTGGGAGGCAGAGGACAGGCAAGTGTACATATaGAATCTTCCCCAGGTCACCTCTATGTGGCCTGGT +
Preference number: 3 (lower is better)
Translates to: RIWEAEDRQVYI*NLPQVTSMWPG
Trigger: ACCAGGCCACATAGAGGTGACCTGGGGAAGATTTCATATGTACACTTGCCTGTCCTCTGCCTCCCAAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR TCA 72 bp AAGGCAGGCAGGGCTAAAGGGTGGCAGAGATCAAAATaGCCCAATAGCTTCTTCAAGGTATTCCCAGCTGAG +
Preference number: 3 (lower is better)
Translates to: KAGRAKGWQRSK*PNSFFKVFPAE
Trigger: CTCAGCTGGGAATACCTTGAAGAAGCTATTGGGTCATTTTGATCTCTGCCACCCTTTAGCCCTGCCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CCA 72 bp GGACCATGCTTTGCTCAAAGTCTGCATCCTCTTCAGTaGGCTGATAAAATGGAAGTGGCACACCCTCGTAGA +
Preference number: 3 (lower is better)
Translates to: GPCFAQSLHPLQ*ADKMEVAHPRR
Trigger: TCTACGAGGGTGTGCCACTTCCATTTTATCAGCCCACTGAAGAGGATGCAGACTTTGAGCAAAGCATGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CAA 90 bp TCGTTCTCTTGGGGAGGGAGGAGAGGACACTGTTTACTCAAGCATTTTACTGACTTGTTCAGCTTCCCGTaGCTATCACAGCCAATCTGG +
Preference number: 3 (lower is better)
Translates to: SFSWGGRRGHCLLKHFTDLFSFP*LSQPIW
Trigger: CCAGATTGGCTGTGATAGCAACGGGAAGCTGAACAA...GTCAGTAAAATGCTTGAGTAAACAGTGTCCTCTCCTCCCTCCCCAAGAGAACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR TCA 72 bp GTAGCACTTGGAGAGAAACTTGACGGTGAGAGTAGCTaGTGGGGGCTACGAGTTGACACACTCCTTTTTGTT +
Preference number: 3 (lower is better)
Translates to: VALGEKLDGESS*WGLRVDTLLFV
Trigger: AACAAAAAGGAGTGTGTCAACTCGTAGCCCCCATCAGCTACTCTCACCGTCAAGTTTCTCTCCAAGTGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR GCA 72 bp ATGTCAAGCCGAAGATCACTCCGTTTATGGAGAGGCTaGAGGGCTCGGACACAAACTGTACTTGCTTTTTGT +
Preference number: 3 (lower is better)
Translates to: MSSRRSLRLWRG*RARTQTVLAFC
Trigger: ACAAAAAGCAAGTACAGTTTGTGTCCGAGCCCTGCAGCCTCTCCATAAACGGAGTGATCTTCGGCTTGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CCA 72 bp ACCACTTCTCCTCGGTTACTTCGTGAGTTGTATTTCTaGGAGGGAGTAGCACTTGGAGAGAAACTTGACGGT +
Preference number: 3 (lower is better)
Translates to: TTSPRLLRELYF*EGVALGEKLDG
Trigger: ACCGTCAAGTTTCTCTCCAAGTGCTACTCCCTCCCAGAAATACAACTCACGAAGTAACCGAGGAGAAGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CCA 72 bp GAGATTGAACTAACTCTTGTTTGGCAAGAGGGGGACTaGTCTAGGCAGATTCCTTGTAAGGGACCTAACTCC +
Preference number: 3 (lower is better)
Translates to: EIELTLVWQEGD*SRQIPCKGPNS
Trigger: GGAGTTAGGTCCCTTACAAGGAATCTGCCTAGACCAGTCCCCCTCTTGCCAAACAAGAGTTAGTTCAATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CAA 90 bp TGCGTAAACATAGAACGACTCATAGTCAATGGCCATGTCTTCTTGGGGCGGGTAGCTTCTGAGAACCCTTaGAAGGTGTGGTGTAAGAGT +
Preference number: 3 (lower is better)
Translates to: CVNIERLIVNGHVFLGRVASENP*KVWCKS
Trigger: ACTCTTACACCACACCTTCAAAGGGTTCTCAGAAGC...TACCCGCCCCAAGAAGACATGGCCATTGACTATGAGTCGTTCTATGTTTACGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CAA 90 bp AGTTGTTTGTTTTCTGGTCCCACCACCTCCCCAAAGAAACAAGGCCACAGGGCATTCCTACCAGTGGTGTaGATTCCTTCCATAATTACA +
Preference number: 3 (lower is better)
Translates to: SCLFSGPTTSPKKQGHRAFLPVV*IPSIIT
Trigger: TGTAATTATGGAAGGAATCAACACCACTGGTAGGAA...TGCCCTGTGGCCTTGTTTCTTTGGGGAGGTGGTGGGACCAGAAAACAAACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CAA 90 bp CTGGTGTTTCTGGGAAAAAGCAGAGTTCAAACCTACCTTCACGAAGTACCTCAGTGGGTCAAGATGTGCTaGAGTATTCGGCTGAATCTG +
Preference number: 3 (lower is better)
Translates to: LVFLGKSRVQTYLHEVPQWVKMC*SIRLNL
Trigger: CAGATTCAGCCGAATACTCAAGCACATCTTGACCCA...CTGAGGTACTTCGTGAAGGTAGGTTTGAACTCTGCTTTTTCCCAGAAACACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR TCA 72 bp GAATATTCCTTAAGCTCAGATAAATCCACTGGAATTTaGGCACCCGAGGAATGTTCCCGGTCTCCCTCGAGA +
Preference number: 3 (lower is better)
Translates to: EYSLSSDKSTGI*APEECSRSPSR
Trigger: TCTCGAGGGAGACCGGGAACATTCCTCGGGTGCTCAAATTCCAGTGGATTTATCTGAGCTTAAGGAATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR TCA 72 bp AGGGAGGAGAGGACACTGTTTACTCAAGCATTTTACTaGCAGAGTTGTTTGTTTTCTGGTCCCACCACCTCC +
Preference number: 3 (lower is better)
Translates to: REERTLFTQAFY*QSCLFSGPTTS
Trigger: GGAGGTGGTGGGACCAGAAAACAAACAACTCTGTCAGTAAAATGCTTGAGTAAACAGTGTCCTCTCCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CCA 72 bp TCAGAACTTCTCGAATGTCTGGGAGCTTCTGAAACATaGATTTGTAGCTCCCAGTTAGTGCCTCTGGACATC +
Preference number: 3 (lower is better)
Translates to: SELLECLGASET*ICSSQLVPLDI
Trigger: GATGTCCAGAGGCACTAACTGGGAGCTACAAATCCATGTTTCAGAAGCTCCCAGACATTCGAGAAGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CAA 90 bp GGCAGAGGACAGGCAAGTGTACATATGAAATCTTCCCCAGGTCACCTCTATGTGATTTTACTGACAGAGTaGTTTGTTTTCTGGTCCCAC +
Preference number: 3 (lower is better)
Translates to: GRGQASVHMKSSPGHLYVILLTE*FVFWSH
Trigger: GTGGGACCAGAAAACAAACAACTCTGTCAGTAAAAT...CACATAGAGGTGACCTGGGGAAGATTTCATATGTACACTTGCCTGTCCTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR-3UTR CAA 90 bp TCGTTCTCTTGGGGAGGGAGGAGAGGACACTGTTTACTCAAGCATTTTACTGACGTTCGTAGACACTGCTaGAAAATGTCTTCAAATGGA +
Preference number: 3 (lower is better)
Translates to: SFSWGGRRGHCLLKHFTDVRRHC*KMSSNG
Trigger: TCCATTTGAAGACATTTTCAAGCAGTGTCTACGAAC...GTCAGTAAAATGCTTGAGTAAACAGTGTCCTCTCCTCCCTCCCCAAGAGAACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp GGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCACCAGGGGCGGATGCGGACATaGTCGCCCAAGCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GLQASPGYCATWQSSCHQGRMRT*SPKPGA
Trigger: GGCCCCTGGCTTGGGCGACCATGTCCGCATCCGCCC...CTGGTGGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp CACTCAGAGGCAGGCCCGGCTGCACAAGTCCTCCCTGCTGGGCCTGGTCACTGCGCGGCCCCCTCCAGATaGAGAGGTCAGGCTGGGACC +
Preference number: 4 (lower is better)
Translates to: HSEAGPAAQVLPAGPGHCAAPSR*RGQAGT
Trigger: GGTCCCAGCCTGACCTCTCCATCTGGAGGGGGCCGC...GCAGTGACCAGGCCCAGCAGGGAGGACTTGTGCAGCCGGGCCTGCCTCTGAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp GCAGGCCCGGCTGCACAAGTCCTCCCTGCTGGGCCTGGTCACTGCAGCTGCCCCGCAAGCCCTGGCTACTaGGCGACTTGGCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: AGPAAQVLPAGPGHCSCPASPGY*ATWQSS
Trigger: GCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGC...GGGGCAGCTGCAGTGACCAGGCCCAGCAGGGAGGACTTGTGCAGCCGGGCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GCAGGCCCGGCTGCACAAGTCCTCCCTGCTGGGCCTGGTCACTGCAGCTGCCCCGGGGTTTGCCGGTCTTaGCTCTGGCATGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: AGPAAQVLPAGPGHCSCPGVCRS*LWHVRQ
Trigger: CTGCCTCACATGCCAGAGCCAAGACCGGCAAACCCC...GGGGCAGCTGCAGTGACCAGGCCCAGCAGGGAGGACTTGTGCAGCCGGGCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp GTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCCACCCAGCTCCGACCTaGGCCCAAGAAGCCCACGGG +
Preference number: 4 (lower is better)
Translates to: VLGCRQALATARLGKAAAHPAPT*AQEAHG
Trigger: CCCGTGGGCTTCTTGGGCGCAGGTCGGAGCTGGGTG...GGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp GTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCGCTGGGCCTGGTCACTaGAGCTGCCCCTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: VLGCRQALATARLGKAAAAGPGH*SCPSLA
Trigger: AGCCAGGGAGGGGCAGCTGCAGTGACCAGGCCCAGC...GGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp GCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCAGATGGAGAGGTCAGGCTGGGCCGGGCGGCAGAGCTTaGAGTGAGCCGAGATCTCAC +
Preference number: 4 (lower is better)
Translates to: ALEQPSEAAPSRWRGQAGPGGRA*SEPRSH
Trigger: GTGAGATCTCGGCTCACTGCAAGCTCTGCCGCCCGG...CCCAGCCTGACCTCTCCATCTGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCAGATGGAGAGGTCAGGCTGGGGCTGCAGGCAAGCCCTaGCTACTGCGCGACTTGGCA +
Preference number: 4 (lower is better)
Translates to: ALEQPSEAAPSRWRGQAGAAGKP*LLRDLA
Trigger: TGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGC...CCCAGCCTGACCTCTCCATCTGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp CACTCAGAGGCAGGCCCGGCTGCACAAGTCCTCCCTGCTGGGCCTGGTCACTGCGACCGTGACAGGAGGTaGCTGGCCCAAGCAAGACCT +
Preference number: 4 (lower is better)
Translates to: HSEAGPAAQVLPAGPGHCDRDRR*LAQARP
Trigger: AGGTCTTGCTTGGGCCAGTCACCTCCTGTCACGGTC...GCAGTGACCAGGCCCAGCAGGGAGGACTTGTGCAGCCGGGCCTGCCTCTGAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp GGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCACCAGGCAATGCATGGGCTCTaGCTCTCTGCCCCGTCCGCT +
Preference number: 4 (lower is better)
Translates to: GLQASPGYCATWQSSCHQAMHGL*LSAPSA
Trigger: AGCGGACGGGGCAGAGAGGCAGAGCCCATGCATTGC...CTGGTGGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCAGATGGAGAGGTCAGGCTGGGTGCCGGTCTTGGCTCTaGCATGTGAGGCAGGACAGC +
Preference number: 4 (lower is better)
Translates to: ALEQPSEAAPSRWRGQAGCRSWL*HVRQDS
Trigger: GCTGTCCTGCCTCACATGCCAGAGCCAAGACCGGCA...CCCAGCCTGACCTCTCCATCTGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp CACTCAGAGGCAGGCCCGGCTGCACAAGTCCTCCCTGCTGGGCCTGGTCACTGCGGCTCCCAAACGCCCTaGATGGAGGGAGCAGAAATC +
Preference number: 4 (lower is better)
Translates to: HSEAGPAAQVLPAGPGHCGSQTP*MEGAEI
Trigger: GATTTCTGCTCCCTCCATTCAGGGCGTTTGGGAGCC...GCAGTGACCAGGCCCAGCAGGGAGGACTTGTGCAGCCGGGCCTGCCTCTGAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp CACTCAGAGGCAGGCCCGGCTGCACAAGTCCTCCCTGCTGGGCCTGGTCACTGCTTCCGGAAGAACTACTaGTCTCCTCGGCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: HSEAGPAAQVLPAGPGHCFRKNY*SPRPPG
Trigger: ACCTGGGGGCCGAGGAGATCAGTAGTTCTTCCGGAA...GCAGTGACCAGGCCCAGCAGGGAGGACTTGTGCAGCCGGGCCTGCCTCTGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp GGTTTGCCGGTCTTGGCTCTGGCATGTGAGGCAGGACAGCCTGCCAGCTTAGGGAGCTCCTCCGCCAGCTaGTGGGCGGATGCGGACATG +
Preference number: 4 (lower is better)
Translates to: GLPVLALACEAGQPASLGSSSAS*WADADM
Trigger: CATGTCCGCATCCGCCCAGCAGCTGGCGGAGGAGCT...CCCTAAGCTGGCAGGCTGTCCTGCCTCACATGCCAGAGCCAAGACCGGCAAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp GGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCACCAGAAGGTGCCTCCCACCTaGCCTTTGGTAAGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: GLQASPGYCATWQSSCHQKVPPT*PLVRRP
Trigger: TGGGCGCCTTACCAAAGGGCAGGTGGGAGGCACCTT...CTGGTGGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp GGTTTGCCGGTCTTGGCTCTGGCATGTGAGGCAGGACAGCCTGCCAGCTTAGGGAGAGGCAGGCCCGGCTaGACAAGTCCTCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GLPVLALACEAGQPASLGRGRPG*TSPPCW
Trigger: CCAGCAGGGAGGACTTGTGCAGCCGGGCCTGCCTCT...CCCTAAGCTGGCAGGCTGTCCTGCCTCACATGCCAGAGCCAAGACCGGCAAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp GCAGGCCCGGCTGCACAAGTCCTCCCTGCTGGGCCTGGTCACTGCAGCTGCCCCACTTGGCAAAGCAGCTaGCACCAGGACTCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: AGPAAQVLPAGPGHCSCPTWQSS*HQDSSF
Trigger: AAAGCTGGAGTCCTGGTGGCAGCTGCTTTGCCAAGT...GGGGCAGCTGCAGTGACCAGGCCCAGCAGGGAGGACTTGTGCAGCCGGGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp CAGCTGCCACCAGGACTCCAGCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCACTGACAGCTGGGGTTTaGCGGTCTTGGCTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: QLPPGLQLWNSPARRPPPLTAGV*RSWLWH
Trigger: ATGCCAGAGCCAAGACCGGCAAACCCCAGCTGTCAG...TGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGCTGGAGTCCTGGTGGCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp CAGCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCAGATGGAGAGGTCAGGCTGACACCAGCAGCTTGCTaGCCCCTTGCCCACTTCCCT +
Preference number: 4 (lower is better)
Translates to: QLWNSPARRPPPDGEVRLTPAAC*PLAHFP
Trigger: AGGGAAGTGGGCAAGGGGGCAGCAAGCTGCTGGTGT...CAGCCTGACCTCTCCATCTGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCAGATGGAGAGGTCAGGCTGGGGGCGGGATCCACAGCTaGCTTACTTCTGGACACGGA +
Preference number: 4 (lower is better)
Translates to: ALEQPSEAAPSRWRGQAGGGIHS*LTSGHG
Trigger: TCCGTGTCCAGAAGTAAGCCAGCTGTGGATCCCGCC...CCCAGCCTGACCTCTCCATCTGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp CAGCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCAGATGGAGAGGTCAGGCTGAGGACGCTCTCCTGGTaGGAACGTCCTGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: QLWNSPARRPPPDGEVRLRTLSW*ERPASQ
Trigger: TTGGGAAGCAGGACGTTCTCACCAGGAGAGCGTCCT...CAGCCTGACCTCTCCATCTGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp CACTCAGAGGCAGGCCCGGCTGCACAAGTCCTCCCTGCTGGGCCTGGTCACTGCGTGACAGGAGGTGACTaGCCCAAGCAAGACCTCAGA +
Preference number: 4 (lower is better)
Translates to: HSEAGPAAQVLPAGPGHCVTGGD*PKQDLR
Trigger: TCTGAGGTCTTGCTTGGGCCAGTCACCTCCTGTCAC...GCAGTGACCAGGCCCAGCAGGGAGGACTTGTGCAGCCGGGCCTGCCTCTGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GGTTTGCCGGTCTTGGCTCTGGCATGTGAGGCAGGACAGCCTGCCAGCTTAGGGCCCTGCCCTGACAGCTaGGGTTTGCCGGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GLPVLALACEAGQPASLGPCPDS*GLPVLA
Trigger: AGCCAAGACCGGCAAACCCCAGCTGTCAGGGCAGGG...CCCTAAGCTGGCAGGCTGTCCTGCCTCACATGCCAGAGCCAAGACCGGCAAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp CAGACATCTGGCCGGTCATGGTTGATGACAGCAATCAGGTCAAGCAGGGGGTCACCCCTCCGCGGACCGTaGCAGGAGGTGACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: QTSGRSWLMTAIRSSRGSPLRGP*QEVTGP
Trigger: TGGGCCAGTCACCTCCTGTCACGGTCCGCGGAGGGG...TGACCCCCTGCTTGACCTGATTGCTGTCATCAACCATGACCGGCCAGATGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR GCA 90 bp GGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCACCAGCAGATCCTGACGACCTaGACAGCAATGCATGGGCTC +
Preference number: 4 (lower is better)
Translates to: GLQASPGYCATWQSSCHQQILTT*TAMHGL
Trigger: GAGCCCATGCATTGCTGTGCAGGTCGTCAGGATCTG...CTGGTGGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp GGGCAGGAAGCCACTCCACGTCTGGCCAGTGACAGCTTTTCCCCAGATGCCAGGTGCACAAGTCCTCCCTaGTGGGCCTGGTCACTGCAG +
Preference number: 4 (lower is better)
Translates to: GQEATPRLASDSFSPDARCTSPP*WAWSLQ
Trigger: CTGCAGTGACCAGGCCCAGCAGGGAGGACTTGTGCA...CCTGGCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGAGTGGCTTCCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCCCCACTGGACAGGACTaGGGCTGGATAGAAACCCAG +
Preference number: 4 (lower is better)
Translates to: VLGCRQALATARLGKAAAPTGQD*GWIETQ
Trigger: CTGGGTTTCTATCCAGCCCCAGTCCTGTCCAGTGGG...GGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp CAGCTGCCACCAGGACTCCAGCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCACCTTTTACTGTACCCTaGTCAGGTCTGGGGCTCGAT +
Preference number: 4 (lower is better)
Translates to: QLPPGLQLWNSPARRPPPPFTVP*SGLGLD
Trigger: ATCGAGCCCCAGACCTGACCAGGGTACAGTAAAAGG...TGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGCTGGAGTCCTGGTGGCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR CAA 72 bp TTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTaGGCAAAGCAGCTGCCACCAGGACTCCAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: FWAAGKPWLLRD*AKQLPPGLQLW
Trigger: CCAAAGCTGGAGTCCTGGTGGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp CACAGGGCTATGTCTTGGCTCTTGGCTAAGACTTTAAGGGCCCACACAGCAGAGCCCCTCCGCGGACCGTaGCAGGAGGTGACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: HRAMSWLLAKTLRAHTAEPLRGP*QEVTGP
Trigger: TGGGCCAGTCACCTCCTGTCACGGTCCGCGGAGGGG...CTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp GTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCAGAAGCCTCAGATCCTaGCGACCTGCACAGCAATGC +
Preference number: 4 (lower is better)
Translates to: VLGCRQALATARLGKAAARSLRS*RPAQQC
Trigger: GCATTGCTGTGCAGGTCGTCAGGATCTGAGGCTTCT...GGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp CACTCAGAGGCAGGCCCGGCTGCACAAGTCCTCCCTGCTGGGCCTGGTCACTGCACATCTGGCCGGTCATaGTTGATGACAGCAATCAGG +
Preference number: 4 (lower is better)
Translates to: HSEAGPAAQVLPAGPGHCTSGRS*LMTAIR
Trigger: CCTGATTGCTGTCATCAACCATGACCGGCCAGATGT...GCAGTGACCAGGCCCAGCAGGGAGGACTTGTGCAGCCGGGCCTGCCTCTGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCAGATGGAGAGGTCAGGCTGGGACGACTCATAGTCAATaGCCATGTCTTCTTGGGGCG +
Preference number: 4 (lower is better)
Translates to: ALEQPSEAAPSRWRGQAGTTHSQ*PCLLGA
Trigger: CGCCCCAAGAAGACATGGCCATTGACTATGAGTCGT...CCCAGCCTGACCTCTCCATCTGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp CAGCTGCCACCAGGACTCCAGCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCATCTGGACACGGAGCATaGACTGAGAAGCAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: QLPPGLQLWNSPARRPPPSGHGA*TEKQEL
Trigger: AAGCTCTTGCTTCTCAGTCCATGCTCCGTGTCCAGA...TGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGCTGGAGTCCTGGTGGCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp CAGGAAGCCACTCCACGTCTGGCCAGTGACAGCTTTTCCCCAGATGCCAGGACAGCTGAGGCAGGAGAATaGCATGAACCCGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: QEATPRLASDSFSPDARTAEAGE*HEPGRQ
Trigger: CTGCCGCCCGGGTTCATGCCATTCTCCTGCCTCAGC...TGTCCTGGCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGAGTGGCTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GAGTGTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCCAGCATAGAGGTCACTaGGGCCTTTGGGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: ECSGLQASPGYCATWQSSQHRGH*GLWGMR
Trigger: CCTCATCCCCCAAAGGCCCCAGTGACCTCTATGCTG...GCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp CAGACATCTGGCCGGTCATGGTTGATGACAGCAATCAGGTCAAGCAGGGGGTCAGGGGGTGGCGAGCGATaGGCTCCTCGCCCTCTTATC +
Preference number: 4 (lower is better)
Translates to: QTSGRSWLMTAIRSSRGSGGGER*APRPLI
Trigger: GATAAGAGGGCGAGGAGCTCATCGCTCGCCACCCCC...TGACCCCCTGCTTGACCTGATTGCTGTCATCAACCATGACCGGCCAGATGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp CAGCTGCCACCAGGACTCCAGCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCATCGGCTGAATCTGTCTaGAGTTCCGGAAGAACTACT +
Preference number: 4 (lower is better)
Translates to: QLPPGLQLWNSPARRPPPSAESV*SSGRTT
Trigger: AGTAGTTCTTCCGGAACTTCAGACAGATTCAGCCGA...TGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGCTGGAGTCCTGGTGGCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp CAGCTGCCACCAGGACTCCAGCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCATCCTGGCTAACATGGTaGAACCCCATCTCCACTAAA +
Preference number: 4 (lower is better)
Translates to: QLPPGLQLWNSPARRPPPSWLTW*NPISTK
Trigger: TTTAGTGGAGATGGGGTTTCACCATGTTAGCCAGGA...TGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGCTGGAGTCCTGGTGGCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp CAGGAAGCCACTCCACGTCTGGCCAGTGACAGCTTTTCCCCAGATGCCAGGACAACCACAGCATGCATGTaGGGAACTGCGCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: QEATPRLASDSFSPDARTTTACM*GTAQGG
Trigger: GCCTCCCTGCGCAGTTCCTCACATGCATGCTGTGGT...TGTCCTGGCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGAGTGGCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp CAGACATCTGGCCGGTCATGGTTGATGACAGCAATCAGGTCAAGCAGGGGGTCACCATCAGCTGACCCATaGGGGGTGAGTGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: QTSGRSWLMTAIRSSRGSPSADP*GVSAGW
Trigger: CCACCCGGCACTCACCCCTCATGGGTCAGCTGATGG...TGACCCCCTGCTTGACCTGATTGCTGTCATCAACCATGACCGGCCAGATGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR GCA 90 bp CAGCTGCCACCAGGACTCCAGCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCAACCAGGACCATGCTTTaGTCAAAGTCTGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: QLPPGLQLWNSPARRPPPTRTML*SKSASS
Trigger: AGAGGATGCAGACTTTGAGCAAAGCATGGTCCTGGT...TGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGCTGGAGTCCTGGTGGCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp GCTATGTCTTGGCTCTTGGCTAAGACTTTAAGGGCCCACACAGCAGAGAACAGCTGGGCTCTGCCTCTCTaGCCCGTCCGCTGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: AMSWLLAKTLRAHTAENSWALPL*PVRCRP
Trigger: AGGCCGGCAGCGGACGGGGCAGAGAGGCAGAGCCCA...GCTGTTCTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCCCCAAACGCCCTGAATaGAGGGAGCAGAAATCTCGA +
Preference number: 4 (lower is better)
Translates to: VLGCRQALATARLGKAAAPKRPE*REQKSR
Trigger: TCGAGATTTCTGCTCCCTCCATTCAGGGCGTTTGGG...GGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCAGATGGAGAGGTCAGGCTGGGAGTGGGCTGATAAAATaGAAGTGGCACACCCTCGTA +
Preference number: 4 (lower is better)
Translates to: ALEQPSEAAPSRWRGQAGSGLIK*KWHTLV
Trigger: TACGAGGGTGTGCCACTTCCATTTTATCAGCCCACT...CCCAGCCTGACCTCTCCATCTGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GGGCAGGAAGCCACTCCACGTCTGGCCAGTGACAGCTTTTCCCCAGATGCCAGGGATGATGAGGACATCTaGGGTGACAGGCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GQEATPRLASDSFSPDARDDEDI*GDRQLC
Trigger: GCACAGCTGCCTGTCACCCCAGATGTCCTCATCATC...CCTGGCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGAGTGGCTTCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCAAAATTAGCCAGGCGTaGTGGTGGGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: VLGCRQALATARLGKAAAKISQA*WWVPVV
Trigger: GACTACAGGCACCCACCACCACGCCTGGCTAATTTT...GGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GGTTTGCCGGTCTTGGCTCTGGCATGTGAGGCAGGACAGCCTGCCAGCTTAGGGATGGAGAGGTCAGGCTaGGACCACAGCATGCATGTG +
Preference number: 4 (lower is better)
Translates to: GLPVLALACEAGQPASLGMERSG*DHSMHV
Trigger: CACATGCATGCTGTGGTCCCAGCCTGACCTCTCCAT...CCCTAAGCTGGCAGGCTGTCCTGCCTCACATGCCAGAGCCAAGACCGGCAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp CAGGAAGCCACTCCACGTCTGGCCAGTGACAGCTTTTCCCCAGATGCCAGGACAGGCTACTGCGCGACTTaGCAAAGCAGCTGCCACCAG +
Preference number: 4 (lower is better)
Translates to: QEATPRLASDSFSPDARTGYCAT*QSSCHQ
Trigger: CTGGTGGCAGCTGCTTTGCCAAGTCGCGCAGTAGCC...TGTCCTGGCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGAGTGGCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCTACCCTGGTCAGGTCTaGGGCTCGATTCCATTTCAC +
Preference number: 4 (lower is better)
Translates to: VLGCRQALATARLGKAAAYPGQV*GSIPFH
Trigger: GTGAAATGGAATCGAGCCCCAGACCTGACCAGGGTA...GGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp GGGCAGGAAGCCACTCCACGTCTGGCCAGTGACAGCTTTTCCCCAGATGCCAGGGAAACCCAGTGTGACTaGCACTCTGCCTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GQEATPRLASDSFSPDARETQCD*HSAFSG
Trigger: TCCAGAGAAGGCAGAGTGTCAGTCACACTGGGTTTC...CCTGGCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGAGTGGCTTCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp AACAGGATGCAGACATCTGGCCGGTCATGGTTGATGACAGCAATCAGGTCAAGCCACCCAGCTCCGACCTaGGCCCAAGAAGCCCACGGG +
Preference number: 4 (lower is better)
Translates to: NRMQTSGRSWLMTAIRSSHPAPT*AQEAHG
Trigger: CCCGTGGGCTTCTTGGGCGCAGGTCGGAGCTGGGTG...GCTTGACCTGATTGCTGTCATCAACCATGACCGGCCAGATGTCTGCATCCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR GCA 90 bp GGGCAGGAAGCCACTCCACGTCTGGCCAGTGACAGCTTTTCCCCAGATGCCAGGCGTTTATGGAGAGGCTaGAGGGCTCGGACACAAACT +
Preference number: 4 (lower is better)
Translates to: GQEATPRLASDSFSPDARRLWRG*RARTQT
Trigger: AGTTTGTGTCCGAGCCCTGCAGCCTCTCCATAAACG...CCTGGCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGAGTGGCTTCCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp CACAGGGCTATGTCTTGGCTCTTGGCTAAGACTTTAAGGGCCCACACAGCAGAGTCCTCCGCCAGCTGCTaGGCGGATGCGGACATGGTC +
Preference number: 4 (lower is better)
Translates to: HRAMSWLLAKTLRAHTAESSASC*ADADMV
Trigger: GACCATGTCCGCATCCGCCCAGCAGCTGGCGGAGGA...CTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGCCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp CGTGATGCTGTCAGATGTGGTGTATGGTCCACAGGCAACCAGGACCATGCTTTGTCCTCCGCCAGCTGCTaGGCGGATGCGGACATGGTC +
Preference number: 4 (lower is better)
Translates to: RDAVRCGVWSTGNQDHALSSASC*ADADMV
Trigger: GACCATGTCCGCATCCGCCCAGCAGCTGGCGGAGGA...CAAAGCATGGTCCTGGTTGCCTGTGGACCATACACCACATCTGACAGCATCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp GCTATGTCTTGGCTCTTGGCTAAGACTTTAAGGGCCCACACAGCAGAGAACAGCGGGGGTGGCGAGCGATaGGCTCCTCGCCCTCTTATC +
Preference number: 4 (lower is better)
Translates to: AMSWLLAKTLRAHTAENSGGGER*APRPLI
Trigger: GATAAGAGGGCGAGGAGCTCATCGCTCGCCACCCCC...GCTGTTCTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp GAAAATCACAAAGCCTTCTCGCCTTTTCTGAGTGGGCGGGATCCACAGCTGGCTGGCAGGAGAATGGCATaGACCCGGGCGGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: ENHKAFSPFLSGRDPQLAGRRMA*TRAAEL
Trigger: AAGCTCTGCCGCCCGGGTTCATGCCATTCTCCTGCC...AGCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAGAAGGCTTTGTGATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp GAAAATCACAAAGCCTTCTCGCCTTTTCTGAGTGGGCGGGATCCACAGCTGGCTCTTGGCTCTGGCATGTaGGGCAGGACAGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ENHKAFSPFLSGRDPQLALGSGM*GRTACQ
Trigger: CTGGCAGGCTGTCCTGCCTCACATGCCAGAGCCAAG...AGCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAGAAGGCTTTGTGATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp GTTGTTCAGCTTCCCGTTGCTATCACAGCCAATCTGGCCCAGCAGAGTGACAGGCTGACCCATGAGGGGTaGGTGCCGGGTGGTCTAGAA +
Preference number: 4 (lower is better)
Translates to: VVQLPVAITANLAQQSDRLTHEG*VPGGLE
Trigger: TTCTAGACCACCCGGCACTCACCCCTCATGGGTCAG...CCTGTCACTCTGCTGGGCCAGATTGGCTGTGATAGCAACGGGAAGCTGAACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR GCA 90 bp GCTATGTCTTGGCTCTTGGCTAAGACTTTAAGGGCCCACACAGCAGAGAACAGCCAGCTGCTGGGCGGATaGGGACATGGTCGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: AMSWLLAKTLRAHTAENSQLLGG*GHGRPS
Trigger: GCTTGGGCGACCATGTCCGCATCCGCCCAGCAGCTG...GCTGTTCTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp GACAGCAATCAGGTCAAGCAGGGGGTCATACGTGATGCTGTCAGATGTGGTGTAAGCTCCTCCGCCAGCTaGTGGGCGGATGCGGACATG +
Preference number: 4 (lower is better)
Translates to: DSNQVKQGVIRDAVRCGVSSSAS*WADADM
Trigger: CATGTCCGCATCCGCCCAGCAGCTGGCGGAGGAGCT...TACACCACATCTGACAGCATCACGTATGACCCCCTGCTTGACCTGATTGCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR GCA 90 bp GCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCAGATGGAGAGGTCAGGCTGGGTCCTTGCAGGTACTATaGCTGGCTTTCGATAATCTT +
Preference number: 4 (lower is better)
Translates to: ALEQPSEAAPSRWRGQAGSLQVL*LAFDNL
Trigger: AAGATTATCGAAAGCCAGGCATAGTACCTGCAAGGA...CCCAGCCTGACCTCTCCATCTGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp GTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCTTCTCCACCTGTTCATaGTTAGCATCCAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: VLGCRQALATARLGKAAAFSTCS*LASRKG
Trigger: CCCTTTCCTGGATGCTAAGCATGAACAGGTGGAGAA...GGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp ATCCACAGCTGGCTTACTTCTGGACACGGAGCATGGACTGAGAAGCAAGAGCTTCTCTGCCCCGTCCGCTaGCGGCCTCCTAAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: IHSWLTSGHGAWTEKQELLCPVR*RPPKVE
Trigger: CTCTACCTTAGGAGGCCGGCAGCGGACGGGGCAGAG...AAGCTCTTGCTTCTCAGTCCATGCTCCGTGTCCAGAAGTAAGCCAGCTGTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GCTATGTCTTGGCTCTTGGCTAAGACTTTAAGGGCCCACACAGCAGAGAACAGCAGAAGCCCACGGGGGTaGCGAGCGATGAGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: AMSWLLAKTLRAHTAENSRSPRG*RAMSSS
Trigger: CGAGGAGCTCATCGCTCGCCACCCCCGTGGGCTTCT...GCTGTTCTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp TCGTTCTCTTGGGGAGGGAGGAGAGGACACTGTTTACTCAAGCATTTTACTGACGGGCGGATGCGGACATaGTCGCCCAAGCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: SFSWGGRRGHCLLKHFTDGRMRT*SPKPGA
Trigger: GGCCCCTGGCTTGGGCGACCATGTCCGCATCCGCCC...GTCAGTAAAATGCTTGAGTAAACAGTGTCCTCTCCTCCCTCCCCAAGAGAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp GTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCCCTCGTAGAGTTTGGTaGCAACAAGTTTCCTACCAG +
Preference number: 4 (lower is better)
Translates to: VLGCRQALATARLGKAAAPRRVW*QQVSYQ
Trigger: CTGGTAGGAAACTTGTTGCCACCAAACTCTACGAGG...GGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp CAGGAAGCCACTCCACGTCTGGCCAGTGACAGCTTTTCCCCAGATGCCAGGACAGGGACAAAGACAAGGTaGGAGCCGGAGCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: QEATPRLASDSFSPDARTGTKTR*EPELLV
Trigger: CACAAGAAGCTCCGGCTCCCACCTTGTCTTTGTCCC...TGTCCTGGCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGAGTGGCTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GGTTTGCCGGTCTTGGCTCTGGCATGTGAGGCAGGACAGCCTGCCAGCTTAGGGGGGTACACAGGCTCATaGTGCACATCTCTCAATGAC +
Preference number: 4 (lower is better)
Translates to: GLPVLALACEAGQPASLGGYTGS*CTSLND
Trigger: GTCATTGAGAGATGTGCACCATGAGCCTGTGTACCC...CCCTAAGCTGGCAGGCTGTCCTGCCTCACATGCCAGAGCCAAGACCGGCAAACC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp CAGGAAGCCACTCCACGTCTGGCCAGTGACAGCTTTTCCCCAGATGCCAGGACAAGATCACTCCGTTTATaGAGAGGCTGCAGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: QEATPRLASDSFSPDARTRSLRL*RGCRAR
Trigger: CCGAGCCCTGCAGCCTCTCCATAAACGGAGTGATCT...TGTCCTGGCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGAGTGGCTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp GTTGTTCAGCTTCCCGTTGCTATCACAGCCAATCTGGCCCAGCAGAGTGACAGGGGCTCCCAAACGCCCTaGATGGAGGGAGCAGAAATC +
Preference number: 4 (lower is better)
Translates to: VVQLPVAITANLAQQSDRGSQTP*MEGAEI
Trigger: GATTTCTGCTCCCTCCATTCAGGGCGTTTGGGAGCC...CCTGTCACTCTGCTGGGCCAGATTGGCTGTGATAGCAACGGGAAGCTGAACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp GTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCAGAGTTCAGGATCTCTaGGGTAAGGCCAACTTTATG +
Preference number: 4 (lower is better)
Translates to: VLGCRQALATARLGKAAARVQDL*GKANFM
Trigger: CATAAAGTTGGCCTTACCTCAGAGATCCTGAACTCT...GGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp CGGCCCCCAGGTGGAAAAGCAGATCTGTGGATGTCAAGCCGAAGATCACTCCGTGCAGGGGGTCATACGTaGTGCTGTCAGATGTGGTGT +
Preference number: 4 (lower is better)
Translates to: RPPGGKADLWMSSRRSLRAGGHT*CCQMWC
Trigger: ACACCACATCTGACAGCATCACGTATGACCCCCTGC...ACGGAGTGATCTTCGGCTTGACATCCACAGATCTGCTTTTCCACCTGGGGGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp CCTGGTCAGGTCTGGGGCTCGATTCCATTTCACCGTCAGAAAGGTGAGAGGCAAACAGATCGGAGTAGCTaGAAGGCGGCTGGGGGTACA +
Preference number: 4 (lower is better)
Translates to: PGQVWGSIPFHRQKGERQTDRSS*KAAGGT
Trigger: TGTACCCCCAGCCGCCTTTCAGCTACTCCGATCTGT...TTGCCTCTCACCTTTCTGACGGTGAAATGGAATCGAGCCCCAGACCTGACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp GAAAATCACAAAGCCTTCTCGCCTTTTCTGAGTGGGCGGGATCCACAGCTGGCTCCTTCTCGCCTTTTCTaGGTGGGCGGGATCCACAGC +
Preference number: 4 (lower is better)
Translates to: ENHKAFSPFLSGRDPQLAPSRLF*VGGIHS
Trigger: GCTGTGGATCCCGCCCACTCAGAAAAGGCGAGAAGG...AGCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAGAAGGCTTTGTGATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp CACAGGGCTATGTCTTGGCTCTTGGCTAAGACTTTAAGGGCCCACACAGCAGAGTCTAGGCCGAAGATCTaGAGCTCCTCCGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HRAMSWLLAKTLRAHTAESRPKI*SSSASC
Trigger: GCAGCTGGCGGAGGAGCTGCAGATCTTCGGCCTAGA...CTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGCCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp ATCCAGGAAAGGGCCAAACAGGATGCAGACATCTGGCCGGTCATGGTTGATGACTCTAGGCCGAAGATCTaGAGCTCCTCCGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IQERAKQDADIWPVMVDDSRPKI*SSSASC
Trigger: GCAGCTGGCGGAGGAGCTGCAGATCTTCGGCCTAGA...GTCATCAACCATGACCGGCCAGATGTCTGCATCCTGTTTGGCCCTTTCCTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR GCA 90 bp GCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCAGATGGAGAGGTCAGGCTGGGTTGCTCAGAAACTCATaGTCAAAAGAGTTCAGGATC +
Preference number: 4 (lower is better)
Translates to: ALEQPSEAAPSRWRGQAGLLRNS*SKEFRI
Trigger: GATCCTGAACTCTTTTGAGCATGAGTTTCTGAGCAA...CCCAGCCTGACCTCTCCATCTGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp GGTTTGCCGGTCTTGGCTCTGGCATGTGAGGCAGGACAGCCTGCCAGCTTAGGGAGGCAACCAGGACCATaGTTTGCTCAAAGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: GLPVLALACEAGQPASLGRQPGP*FAQSLH
Trigger: ATGCAGACTTTGAGCAAAGCATGGTCCTGGTTGCCT...CCCTAAGCTGGCAGGCTGTCCTGCCTCACATGCCAGAGCCAAGACCGGCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp CGGCCCCCAGGTGGAAAAGCAGATCTGTGGATGTCAAGCCGAAGATCACTCCGTGTGACAGGAGGTGACTaGCCCAAGCAAGACCTCAGA +
Preference number: 4 (lower is better)
Translates to: RPPGGKADLWMSSRRSLRVTGGD*PKQDLR
Trigger: TCTGAGGTCTTGCTTGGGCCAGTCACCTCCTGTCAC...ACGGAGTGATCTTCGGCTTGACATCCACAGATCTGCTTTTCCACCTGGGGGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp CAGCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCAGATGGAGAGGTCAGGCTGGGAGCTTCTGAAACATaGATTTGTAGCTCCCAGTTA +
Preference number: 4 (lower is better)
Translates to: QLWNSPARRPPPDGEVRLGASET*ICSSQL
Trigger: TAACTGGGAGCTACAAATCCATGTTTCAGAAGCTCC...CAGCCTGACCTCTCCATCTGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCACCAGAACTTCTCGAATGTCTaGGAGCTTCTGAAACATGGA +
Preference number: 4 (lower is better)
Translates to: GLQASPGYCATWQSSCHQNFSNV*ELLKHG
Trigger: TCCATGTTTCAGAAGCTCCCAGACATTCGAGAAGTT...CTGGTGGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp CTGTGGATGTCAAGCCGAAGATCACTCCGTTTATGGAGAGGCTGCAGGGCTCGGCTATCACAGCCAATCTaGCCCAGCAGAGTGACAGGC +
Preference number: 4 (lower is better)
Translates to: LWMSSRRSLRLWRGCRARLSQPI*PSRVTG
Trigger: GCCTGTCACTCTGCTGGGCCAGATTGGCTGTGATAG...CCGAGCCCTGCAGCCTCTCCATAAACGGAGTGATCTTCGGCTTGACATCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp CAGGAAGCCACTCCACGTCTGGCCAGTGACAGCTTTTCCCCAGATGCCAGGACACAGGATGCAGACATCTaGCCGGTCATGGTTGATGAC +
Preference number: 4 (lower is better)
Translates to: QEATPRLASDSFSPDARTQDADI*PVMVDD
Trigger: GTCATCAACCATGACCGGCCAGATGTCTGCATCCTG...TGTCCTGGCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGAGTGGCTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp ATCCACAGCTGGCTTACTTCTGGACACGGAGCATGGACTGAGAAGCAAGAGCTTCCAGGACTCCAGCTTTaGAACAGCCCAGCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: IHSWLTSGHGAWTEKQELPGLQL*NSPARR
Trigger: CCGCCTCGCTGGGCTGTTCCAAAGCTGGAGTCCTGG...AAGCTCTTGCTTCTCAGTCCATGCTCCGTGTCCAGAAGTAAGCCAGCTGTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp GAGTGTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCCTTCTGAGAACCCTTTaGAGGTGTGGTGTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: ECSGLQASPGYCATWQSSLLRTL*RCGVRV
Trigger: AACTCTTACACCACACCTTCAAAGGGTTCTCAGAAG...GCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAACACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp CAGGAAGCCACTCCACGTCTGGCCAGTGACAGCTTTTCCCCAGATGCCAGGACATCCCTCGAGAATCACTaGCTTGTTGTTCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: QEATPRLASDSFSPDARTSLENH*LVVQLP
Trigger: GGGAAGCTGAACAACAAGTCAGTGATTCTCGAGGGA...TGTCCTGGCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGAGTGGCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp CCTGGTCAGGTCTGGGGCTCGATTCCATTTCACCGTCAGAAAGGTGAGAGGCAAGCAGGGGGTCATACGTaGTGCTGTCAGATGTGGTGT +
Preference number: 4 (lower is better)
Translates to: PGQVWGSIPFHRQKGERQAGGHT*CCQMWC
Trigger: ACACCACATCTGACAGCATCACGTATGACCCCCTGC...TTGCCTCTCACCTTTCTGACGGTGAAATGGAATCGAGCCCCAGACCTGACCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp GTTAGTGCCTCTGGACATCCCAAGACCTTCAGGCTGATGTTTCCAGCTCCTCCTACAGATCGGAGTAGCTaGAAGGCGGCTGGGGGTACA +
Preference number: 4 (lower is better)
Translates to: VSASGHPKTFRLMFPAPPTDRSS*KAAGGT
Trigger: TGTACCCCCAGCCGCCTTTCAGCTACTCCGATCTGT...AGGAGGAGCTGGAAACATCAGCCTGAAGGTCTTGGGATGTCCAGAGGCACTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp CGGCCCCCAGGTGGAAAAGCAGATCTGTGGATGTCAAGCCGAAGATCACTCCGTGAAGTACCTCAGCTCTaGCGGGATGATGAGGACATC +
Preference number: 4 (lower is better)
Translates to: RPPGGKADLWMSSRRSLREVPQL*RDDEDI
Trigger: GATGTCCTCATCATCCCGTCAGAGCTGAGGTACTTC...ACGGAGTGATCTTCGGCTTGACATCCACAGATCTGCTTTTCCACCTGGGGGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp CAGGAAGCCACTCCACGTCTGGCCAGTGACAGCTTTTCCCCAGATGCCAGGACAGATAGAAACCCAGTGTaGCTGACACTCTGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: QEATPRLASDSFSPDARTDRNPV*LTLCLL
Trigger: GAGAAGGCAGAGTGTCAGTCACACTGGGTTTCTATC...TGTCCTGGCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGAGTGGCTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp TGTACCCTGGTCAGGTCTGGGGCTCGATTCCATTTCACCGTCAGAAAGGTGAGAGATGAGGAGTGGGGCTaGGAGTTACCCACTGGACAG +
Preference number: 4 (lower is better)
Translates to: CTLVRSGARFHFTVRKVRDEEWG*ELPTGQ
Trigger: CTGTCCAGTGGGTAACTCTCAGCCCCACTCCTCATC...TCTCACCTTTCTGACGGTGAAATGGAATCGAGCCCCAGACCTGACCAGGGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp GAAAATCACAAAGCCTTCTCGCCTTTTCTGAGTGGGCGGGATCCACAGCTGGCTTCCACGTCTGGCCAGTaGCAGCTTTTCCCCAGATGC +
Preference number: 4 (lower is better)
Translates to: ENHKAFSPFLSGRDPQLASTSGQ*QLFPRC
Trigger: GCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGA...AGCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAGAAGGCTTTGTGATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp GAAAATCACAAAGCCTTCTCGCCTTTTCTGAGTGGGCGGGATCCACAGCTGGCTCGACCTGCACAGCAATaGATGGGCTCTGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: ENHKAFSPFLSGRDPQLARPAQQ*MGSASL
Trigger: CAGAGAGGCAGAGCCCATGCATTGCTGTGCAGGTCG...AGCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAGAAGGCTTTGTGATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp CACAGGGCTATGTCTTGGCTCTTGGCTAAGACTTTAAGGGCCCACACAGCAGAGCTGAGTGTTCTGGGCTaGAGGCAAGCCCTGGCTACT +
Preference number: 4 (lower is better)
Translates to: HRAMSWLLAKTLRAHTAELSVLG*RQALAT
Trigger: AGTAGCCAGGGCTTGCCTGCAGCCCAGAACACTCAG...CTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCTGCAGGTACTATGCCTaGCTTTCGATAATCTTTTGC +
Preference number: 4 (lower is better)
Translates to: VLGCRQALATARLGKAAACRYYA*LSIIFC
Trigger: GCAAAAGATTATCGAAAGCCAGGCATAGTACCTGCA...GGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp CGGCCCCCAGGTGGAAAAGCAGATCTGTGGATGTCAAGCCGAAGATCACTCCGTCAGGATGCAGACATCTaGCCGGTCATGGTTGATGAC +
Preference number: 4 (lower is better)
Translates to: RPPGGKADLWMSSRRSLRQDADI*PVMVDD
Trigger: GTCATCAACCATGACCGGCCAGATGTCTGCATCCTG...ACGGAGTGATCTTCGGCTTGACATCCACAGATCTGCTTTTCCACCTGGGGGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp GGGCAGGAAGCCACTCCACGTCTGGCCAGTGACAGCTTTTCCCCAGATGCCAGGCACAGGGCTATGTCTTaGCTCTTGGCTAAGACTTTA +
Preference number: 4 (lower is better)
Translates to: GQEATPRLASDSFSPDARHRAMS*LLAKTL
Trigger: TAAAGTCTTAGCCAAGAGCCAAGACATAGCCCTGTG...CCTGGCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGAGTGGCTTCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GCTATGTCTTGGCTCTTGGCTAAGACTTTAAGGGCCCACACAGCAGAGAACAGCCTCGCCTTTTCTGAGTaGGCGGGATCCACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: AMSWLLAKTLRAHTAENSLAFSE*AGSTAG
Trigger: GCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAG...GCTGTTCTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp CCACAGGCAACCAGGACCATGCTTTGCTCAAAGTCTGCATCCTCTTCAGTGGGCGGGGTGAGTGCCGGGTaGTCTAGAAGGGAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: PQATRTMLCSKSASSSVGGVSAG*SRRESQ
Trigger: TTGACTTTCCCTTCTAGACCACCCGGCACTCACCCC...GCCCACTGAAGAGGATGCAGACTTTGAGCAAAGCATGGTCCTGGTTGCCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp AGTTGTTTGTTTTCTGGTCCCACCACCTCCCCAAAGAAACAAGGCCACAGGGCAGGGCTCTCGTTCTCTTaGGGAGGGAGGAGAGGACAC +
Preference number: 4 (lower is better)
Translates to: SCLFSGPTTSPKKQGHRAGLSFS*GGRRGH
Trigger: GTGTCCTCTCCTCCCTCCCCAAGAGAACGAGAGCCC...TGCCCTGTGGCCTTGTTTCTTTGGGGAGGTGGTGGGACCAGAAAACAAACAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp CGGCCCCCAGGTGGAAAAGCAGATCTGTGGATGTCAAGCCGAAGATCACTCCGTCAGGTCACCTCTATGTaGCCTGGTGAAAGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: RPPGGKADLWMSSRRSLRQVTSM*PGESPH
Trigger: ATGAGGGCTTTCACCAGGCCACATAGAGGTGACCTG...ACGGAGTGATCTTCGGCTTGACATCCACAGATCTGCTTTTCCACCTGGGGGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CAA 72 bp CAGGTCACCTCTATGTGGCCTGGTGAAAGCCCTCATTaGAGGGCCTTCCTAGTCATCTGGGCTCTCGTTCTC +
Preference number: 4 (lower is better)
Translates to: QVTSMWPGESPH*RAFLVIWALVL
Trigger: GAGAACGAGAGCCCAGATGACTAGGAAGGCCCTCAAATGAGGGCTTTCACCAGGCCACATAGAGGTGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp GCTATGTCTTGGCTCTTGGCTAAGACTTTAAGGGCCCACACAGCAGAGAACAGCGACGGTGAGAGTAGCTaGTGGGGGCTACGAGTTGAC +
Preference number: 4 (lower is better)
Translates to: AMSWLLAKTLRAHTAENSDGESS*WGLRVD
Trigger: GTCAACTCGTAGCCCCCATCAGCTACTCTCACCGTC...GCTGTTCTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp GGGCAGGAAGCCACTCCACGTCTGGCCAGTGACAGCTTTTCCCCAGATGCCAGGTCTTGTAATGTTCCTTaGGTTCGCTGCCAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: GQEATPRLASDSFSPDARSCNVP*VRCQVL
Trigger: AAGAACTTGGCAGCGAACTCAAGGAACATTACAAGA...CCTGGCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGAGTGGCTTCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp GGATGTCAAGCCGAAGATCACTCCGTTTATGGAGAGGCTGCAGGGCTCGGACACTCCCTCGAGAATCACTaGCTTGTTGTTCAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GCQAEDHSVYGEAAGLGHSLENH*LVVQLP
Trigger: GGGAAGCTGAACAACAAGTCAGTGATTCTCGAGGGA...GTGTCCGAGCCCTGCAGCCTCTCCATAAACGGAGTGATCTTCGGCTTGACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp ATCCACAGCTGGCTTACTTCTGGACACGGAGCATGGACTGAGAAGCAAGAGCTTGAACCCTGGAAGGCCTaGCCCTGTCTGAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: IHSWLTSGHGAWTEKQELEPWKA*PCLSVL
Trigger: CAGAACACTCAGACAGGGTCAGGCCTTCCAGGGTTC...AAGCTCTTGCTTCTCAGTCCATGCTCCGTGTCCAGAAGTAAGCCAGCTGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp CCTGGTCAGGTCTGGGGCTCGATTCCATTTCACCGTCAGAAAGGTGAGAGGCAACTGGTGAGAACGTCCTaGTTCCCAAAAGCTACCGCT +
Preference number: 4 (lower is better)
Translates to: PGQVWGSIPFHRQKGERQLVRTS*FPKATA
Trigger: AGCGGTAGCTTTTGGGAAGCAGGACGTTCTCACCAG...TTGCCTCTCACCTTTCTGACGGTGAAATGGAATCGAGCCCCAGACCTGACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp ATCCACAGCTGGCTTACTTCTGGACACGGAGCATGGACTGAGAAGCAAGAGCTTCACCCAGTGCACCTCTaGAGCATAGAGGTCACTGGG +
Preference number: 4 (lower is better)
Translates to: IHSWLTSGHGAWTEKQELHPVHL*SIEVTG
Trigger: CCCAGTGACCTCTATGCTGCAGAGGTGCACTGGGTG...AAGCTCTTGCTTCTCAGTCCATGCTCCGTGTCCAGAAGTAAGCCAGCTGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp ATCCACAGCTGGCTTACTTCTGGACACGGAGCATGGACTGAGAAGCAAGAGCTTAGGCATGCAGCCAGTTaGTTGCTCTGCAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: IHSWLTSGHGAWTEKQELRHAAS*LLCSPA
Trigger: AGCTGGGCTGCAGAGCAAGCAACTGGCTGCATGCCT...AAGCTCTTGCTTCTCAGTCCATGCTCCGTGTCCAGAAGTAAGCCAGCTGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp CCACAGGCAACCAGGACCATGCTTTGCTCAAAGTCTGCATCCTCTTCAGTGGGCCCCAAACGCCCTGAATaGAGGGAGCAGAAATCTCGA +
Preference number: 4 (lower is better)
Translates to: PQATRTMLCSKSASSSVGPKRPE*REQKSR
Trigger: TCGAGATTTCTGCTCCCTCCATTCAGGGCGTTTGGG...GCCCACTGAAGAGGATGCAGACTTTGAGCAAAGCATGGTCCTGGTTGCCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp GGTTTGCCGGTCTTGGCTCTGGCATGTGAGGCAGGACAGCCTGCCAGCTTAGGGCTGATAAAATGGAAGTaGCACACCCTCGTAGAGTTT +
Preference number: 4 (lower is better)
Translates to: GLPVLALACEAGQPASLGLIKWK*HTLVEF
Trigger: AAACTCTACGAGGGTGTGCCACTTCCATTTTATCAG...CCCTAAGCTGGCAGGCTGTCCTGCCTCACATGCCAGAGCCAAGACCGGCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp CTGTGGATGTCAAGCCGAAGATCACTCCGTTTATGGAGAGGCTGCAGGGCTCGGACATCTGGCCGGTCATaGTTGATGACAGCAATCAGG +
Preference number: 4 (lower is better)
Translates to: LWMSSRRSLRLWRGCRARTSGRS*LMTAIR
Trigger: CCTGATTGCTGTCATCAACCATGACCGGCCAGATGT...CCGAGCCCTGCAGCCTCTCCATAAACGGAGTGATCTTCGGCTTGACATCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp TGTCAAGCCGAAGATCACTCCGTTTATGGAGAGGCTGCAGGGCTCGGACACAAAGGGACAAAGACAAGGTaGGAGCCGGAGCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: CQAEDHSVYGEAAGLGHKGTKTR*EPELLV
Trigger: CACAAGAAGCTCCGGCTCCCACCTTGTCTTTGTCCC...TTTGTGTCCGAGCCCTGCAGCCTCTCCATAAACGGAGTGATCTTCGGCTTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp TGTACCCTGGTCAGGTCTGGGGCTCGATTCCATTTCACCGTCAGAAAGGTGAGATCCTCGGCCCCCAGGTaGAAAAGCAGATCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: CTLVRSGARFHFTVRKVRSSAPR*KSRSVD
Trigger: ATCCACAGATCTGCTTTTCCACCTGGGGGCCGAGGA...TCTCACCTTTCTGACGGTGAAATGGAATCGAGCCCCAGACCTGACCAGGGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GAAAATCACAAAGCCTTCTCGCCTTTTCTGAGTGGGCGGGATCCACAGCTGGCTGGACAGGACTGGGGCTaGATAGAAACCCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: ENHKAFSPFLSGRDPQLAGQDWG*IETQCD
Trigger: GTCACACTGGGTTTCTATCCAGCCCCAGTCCTGTCC...AGCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAGAAGGCTTTGTGATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp GCTCGGACACAAACTGTACTTGCTTTTTGTCCTCTCGAGACAGATCGGAGTAGCAGGACGCTCTCCTGGTaGGAACGTCCTGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: ARTQTVLAFCPLETDRSSRTLSW*ERPASQ
Trigger: TTGGGAAGCAGGACGTTCTCACCAGGAGAGCGTCCT...GCTACTCCGATCTGTCTCGAGAGGACAAAAAGCAAGTACAGTTTGTGTCCGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp GGCAGAGGACAGGCAAGTGTACATATGAAATCTTCCCCAGGTCACCTCTATGTGGACGGTGAGAGTAGCTaGTGGGGGCTACGAGTTGAC +
Preference number: 4 (lower is better)
Translates to: GRGQASVHMKSSPGHLYVDGESS*WGLRVD
Trigger: GTCAACTCGTAGCCCCCATCAGCTACTCTCACCGTC...CACATAGAGGTGACCTGGGGAAGATTTCATATGTACACTTGCCTGTCCTCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp GCTCGGACACAAACTGTACTTGCTTTTTGTCCTCTCGAGACAGATCGGAGTAGCTTCCGGAAGAACTACTaGTCTCCTCGGCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ARTQTVLAFCPLETDRSSFRKNY*SPRPPG
Trigger: ACCTGGGGGCCGAGGAGATCAGTAGTTCTTCCGGAA...GCTACTCCGATCTGTCTCGAGAGGACAAAAAGCAAGTACAGTTTGTGTCCGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp GAAAATCACAAAGCCTTCTCGCCTTTTCTGAGTGGGCGGGATCCACAGCTGGCTGAAGTACCTCAGCTCTaGCGGGATGATGAGGACATC +
Preference number: 4 (lower is better)
Translates to: ENHKAFSPFLSGRDPQLAEVPQL*RDDEDI
Trigger: GATGTCCTCATCATCCCGTCAGAGCTGAGGTACTTC...AGCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAGAAGGCTTTGTGATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp CCTGGTCAGGTCTGGGGCTCGATTCCATTTCACCGTCAGAAAGGTGAGAGGCAAAATGTCTCTAGCTCCTaGATGGCCACTGTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: PGQVWGSIPFHRQKGERQNVSSS*MATVLA
Trigger: TGCAAGGACAGTGGCCATGCAGGAGCTAGAGACATT...TTGCCTCTCACCTTTCTGACGGTGAAATGGAATCGAGCCCCAGACCTGACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp GTTGTTCAGCTTCCCGTTGCTATCACAGCCAATCTGGCCCAGCAGAGTGACAGGTGTTCAGCTTCCCGTTaGTATCACAGCCAATCTGGC +
Preference number: 4 (lower is better)
Translates to: VVQLPVAITANLAQQSDRCSASR*YHSQSG
Trigger: GCCAGATTGGCTGTGATAGCAACGGGAAGCTGAACA...CCTGTCACTCTGCTGGGCCAGATTGGCTGTGATAGCAACGGGAAGCTGAACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR GCA 90 bp CTGTGGATGTCAAGCCGAAGATCACTCCGTTTATGGAGAGGCTGCAGGGCTCGGACCAGGACCATGCTTTaGTCAAAGTCTGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: LWMSSRRSLRLWRGCRARTRTML*SKSASS
Trigger: AGAGGATGCAGACTTTGAGCAAAGCATGGTCCTGGT...CCGAGCCCTGCAGCCTCTCCATAAACGGAGTGATCTTCGGCTTGACATCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR GCA 90 bp CTGTGGATGTCAAGCCGAAGATCACTCCGTTTATGGAGAGGCTGCAGGGCTCGGAGGCAACCAGGACCATaGTTTGCTCAAAGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LWMSSRRSLRLWRGCRARRQPGP*FAQSLH
Trigger: ATGCAGACTTTGAGCAAAGCATGGTCCTGGTTGCCT...CCGAGCCCTGCAGCCTCTCCATAAACGGAGTGATCTTCGGCTTGACATCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR GCA 90 bp CACAGGGCTATGTCTTGGCTCTTGGCTAAGACTTTAAGGGCCCACACAGCAGAGAAGGGCCAAACAGGATaGAGACATCTGGCCGGTCAT +
Preference number: 4 (lower is better)
Translates to: HRAMSWLLAKTLRAHTAEKGQTG*RHLAGH
Trigger: ATGACCGGCCAGATGTCTGCATCCTGTTTGGCCCTT...CTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGCCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp GTTAGTGCCTCTGGACATCCCAAGACCTTCAGGCTGATGTTTCCAGCTCCTCCTAAGGGCCAAACAGGATaGAGACATCTGGCCGGTCAT +
Preference number: 4 (lower is better)
Translates to: VSASGHPKTFRLMFPAPPKGQTG*RHLAGH
Trigger: ATGACCGGCCAGATGTCTGCATCCTGTTTGGCCCTT...AGGAGGAGCTGGAAACATCAGCCTGAAGGTCTTGGGATGTCCAGAGGCACTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR GCA 90 bp CAGACATCTGGCCGGTCATGGTTGATGACAGCAATCAGGTCAAGCAGGGGGTCATACACAGGCTCATGGTaGACATCTCTCAATGACGGG +
Preference number: 4 (lower is better)
Translates to: QTSGRSWLMTAIRSSRGSYTGSW*TSLNDG
Trigger: CCCGTCATTGAGAGATGTGCACCATGAGCCTGTGTA...TGACCCCCTGCTTGACCTGATTGCTGTCATCAACCATGACCGGCCAGATGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp GCTATGTCTTGGCTCTTGGCTAAGACTTTAAGGGCCCACACAGCAGAGAACAGCCTATCACAGCCAATCTaGCCCAGCAGAGTGACAGGC +
Preference number: 4 (lower is better)
Translates to: AMSWLLAKTLRAHTAENSLSQPI*PSRVTG
Trigger: GCCTGTCACTCTGCTGGGCCAGATTGGCTGTGATAG...GCTGTTCTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp TGTACCCTGGTCAGGTCTGGGGCTCGATTCCATTTCACCGTCAGAAAGGTGAGAGTCAGATGTGGTGTATaGTCCACAGGCAACCAGGAC +
Preference number: 4 (lower is better)
Translates to: CTLVRSGARFHFTVRKVRVRCGV*STGNQD
Trigger: GTCCTGGTTGCCTGTGGACCATACACCACATCTGAC...TCTCACCTTTCTGACGGTGAAATGGAATCGAGCCCCAGACCTGACCAGGGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GTTGTTCAGCTTCCCGTTGCTATCACAGCCAATCTGGCCCAGCAGAGTGACAGGGGGTACACAGGCTCATaGTGCACATCTCTCAATGAC +
Preference number: 4 (lower is better)
Translates to: VVQLPVAITANLAQQSDRGYTGS*CTSLND
Trigger: GTCATTGAGAGATGTGCACCATGAGCCTGTGTACCC...CCTGTCACTCTGCTGGGCCAGATTGGCTGTGATAGCAACGGGAAGCTGAACAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp GTTGTTCAGCTTCCCGTTGCTATCACAGCCAATCTGGCCCAGCAGAGTGACAGGACGACTCATAGTCAATaGCCATGTCTTCTTGGGGCG +
Preference number: 4 (lower is better)
Translates to: VVQLPVAITANLAQQSDRTTHSQ*PCLLGA
Trigger: CGCCCCAAGAAGACATGGCCATTGACTATGAGTCGT...CCTGTCACTCTGCTGGGCCAGATTGGCTGTGATAGCAACGGGAAGCTGAACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CAA 72 bp CCCTCGAGAATCACTGACTTGTTGTTCAGCTTCCCGTaGCTATCACAGCCAATCTGGCCCAGCAGAGTGACA +
Preference number: 4 (lower is better)
Translates to: PSRITDLLFSFP*LSQPIWPSRVT
Trigger: TGTCACTCTGCTGGGCCAGATTGGCTGTGATAGCAACGGGAAGCTGAACAACAAGTCAGTGATTCTCGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp GAAAATCACAAAGCCTTCTCGCCTTTTCTGAGTGGGCGGGATCCACAGCTGGCTGTGCACATCTCTCAATaGCGGGACAAAGACAAGGTG +
Preference number: 4 (lower is better)
Translates to: ENHKAFSPFLSGRDPQLAVHISQ*RDKDKV
Trigger: CACCTTGTCTTTGTCCCGTCATTGAGAGATGTGCAC...AGCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAGAAGGCTTTGTGATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp CGTGATGCTGTCAGATGTGGTGTATGGTCCACAGGCAACCAGGACCATGCTTTGGTGCACATCTCTCAATaGCGGGACAAAGACAAGGTG +
Preference number: 4 (lower is better)
Translates to: RDAVRCGVWSTGNQDHALVHISQ*RDKDKV
Trigger: CACCTTGTCTTTGTCCCGTCATTGAGAGATGTGCAC...CAAAGCATGGTCCTGGTTGCCTGTGGACCATACACCACATCTGACAGCATCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp ATCCACAGCTGGCTTACTTCTGGACACGGAGCATGGACTGAGAAGCAAGAGCTTACACGGAGCATGGACTaGGAAGCAAGAGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: IHSWLTSGHGAWTEKQELTRSMD*EARASF
Trigger: GAAGGAAGCTCTTGCTTCTCAGTCCATGCTCCGTGT...AAGCTCTTGCTTCTCAGTCCATGCTCCGTGTCCAGAAGTAAGCCAGCTGTGGAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp AACAGGATGCAGACATCTGGCCGGTCATGGTTGATGACAGCAATCAGGTCAAGCCTGGTGAGAACGTCCTaGTTCCCAAAAGCTACCGCT +
Preference number: 4 (lower is better)
Translates to: NRMQTSGRSWLMTAIRSSLVRTS*FPKATA
Trigger: AGCGGTAGCTTTTGGGAAGCAGGACGTTCTCACCAG...GCTTGACCTGATTGCTGTCATCAACCATGACCGGCCAGATGTCTGCATCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR GCA 90 bp CCACAGGCAACCAGGACCATGCTTTGCTCAAAGTCTGCATCCTCTTCAGTGGGCTTCTCCACCTGTTCATaGTTAGCATCCAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: PQATRTMLCSKSASSSVGFSTCS*LASRKG
Trigger: CCCTTTCCTGGATGCTAAGCATGAACAGGTGGAGAA...GCCCACTGAAGAGGATGCAGACTTTGAGCAAAGCATGGTCCTGGTTGCCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR GCA 90 bp GAAAATCACAAAGCCTTCTCGCCTTTTCTGAGTGGGCGGGATCCACAGCTGGCTGGTGACAGGCAGCTGTaGGTAAACATAGAACGACTC +
Preference number: 4 (lower is better)
Translates to: ENHKAFSPFLSGRDPQLAGDRQL*VNIERL
Trigger: GAGTCGTTCTATGTTTACGCACAGCTGCCTGTCACC...AGCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAGAAGGCTTTGTGATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp CGTGATGCTGTCAGATGTGGTGTATGGTCCACAGGCAACCAGGACCATGCTTTGGGTGACAGGCAGCTGTaGGTAAACATAGAACGACTC +
Preference number: 4 (lower is better)
Translates to: RDAVRCGVWSTGNQDHALGDRQL*VNIERL
Trigger: GAGTCGTTCTATGTTTACGCACAGCTGCCTGTCACC...CAAAGCATGGTCCTGGTTGCCTGTGGACCATACACCACATCTGACAGCATCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp CAAGATACTCCCTGTGCTAAGCCGAAGGAGGTAACCACTTCTCCTCGGTTACTTAGATCACTCCGTTTATaGAGAGGCTGCAGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: QDTPCAKPKEVTTSPRLLRSLRL*RGCRAR
Trigger: CCGAGCCCTGCAGCCTCTCCATAAACGGAGTGATCT...AAGTAACCGAGGAGAAGTGGTTACCTCCTTCGGCTTAGCACAGGGAGTATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp CAAGATACTCCCTGTGCTAAGCCGAAGGAGGTAACCACTTCTCCTCGGTTACTTGCCTTCCTAGTCATCTaGGCTCTCGTTCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QDTPCAKPKEVTTSPRLLAFLVI*ALVLLG
Trigger: CCCCAAGAGAACGAGAGCCCAGATGACTAGGAAGGC...AAGTAACCGAGGAGAAGTGGTTACCTCCTTCGGCTTAGCACAGGGAGTATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp CAGACATCTGGCCGGTCATGGTTGATGACAGCAATCAGGTCAAGCAGGGGGTCAGAACTAACTCTTGTTTaGCAAGAGGGGGACTGGTCT +
Preference number: 4 (lower is better)
Translates to: QTSGRSWLMTAIRSSRGSELTLV*QEGDWS
Trigger: AGACCAGTCCCCCTCTTGCCAAACAAGAGTTAGTTC...TGACCCCCTGCTTGACCTGATTGCTGTCATCAACCATGACCGGCCAGATGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp GCTATGTCTTGGCTCTTGGCTAAGACTTTAAGGGCCCACACAGCAGAGAACAGCGAGATAGCTCGCTTCTaGGAACCCTTTGAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: AMSWLLAKTLRAHTAENSEIARF*EPFEGV
Trigger: CACACCTTCAAAGGGTTCTCAGAAGCGAGCTATCTC...GCTGTTCTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp GAAAATCACAAAGCCTTCTCGCCTTTTCTGAGTGGGCGGGATCCACAGCTGGCTAAATCCACTGGAATTTaGGCACCCGAGGAATGTTCC +
Preference number: 4 (lower is better)
Translates to: ENHKAFSPFLSGRDPQLAKSTGI*APEECS
Trigger: GGAACATTCCTCGGGTGCTCAAATTCCAGTGGATTT...AGCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAGAAGGCTTTGTGATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp CCGGAGCTTCTTGTGCCTTCAATAATTGTTCGTAGACACTGCTTGAAAATGTCTCCCATCCCCATCAGCTaGCCCATGAGGGGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: PELLVPSIIVRRHCLKMSPIPIS*PMRGEC
Trigger: GCACTCACCCCTCATGGGTCAGCTGATGGGGATGGG...AGACATTTTCAAGCAGTGTCTACGAACAATTATTGAAGGCACAAGAAGCTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp TGCGTAAACATAGAACGACTCATAGTCAATGGCCATGTCTTCTTGGGGCGGGTACTCTATGTGGCCTGGTaGAAGCCCTCATTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: CVNIERLIVNGHVFLGRVLYVAW*KPSFEG
Trigger: GCCCTCAAATGAGGGCTTTCACCAGGCCACATAGAG...TACCCGCCCCAAGAAGACATGGCCATTGACTATGAGTCGTTCTATGTTTACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR GCA 90 bp ATCCACAGCTGGCTTACTTCTGGACACGGAGCATGGACTGAGAAGCAAGAGCTTTGTTCAGCTTCCCGTTaGTATCACAGCCAATCTGGC +
Preference number: 4 (lower is better)
Translates to: IHSWLTSGHGAWTEKQELCSASR*YHSQSG
Trigger: GCCAGATTGGCTGTGATAGCAACGGGAAGCTGAACA...AAGCTCTTGCTTCTCAGTCCATGCTCCGTGTCCAGAAGTAAGCCAGCTGTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp GCTATGTCTTGGCTCTTGGCTAAGACTTTAAGGGCCCACACAGCAGAGAACAGCTACACAGGCTCATGGTaGACATCTCTCAATGACGGG +
Preference number: 4 (lower is better)
Translates to: AMSWLLAKTLRAHTAENSYTGSW*TSLNDG
Trigger: CCCGTCATTGAGAGATGTGCACCATGAGCCTGTGTA...GCTGTTCTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp CTAACTCCAAGGCAGGCAGGGCTAAAGGGTGGCAGAGATCAAAATGACCCAATACGTTTATGGAGAGGCTaGAGGGCTCGGACACAAACT +
Preference number: 4 (lower is better)
Translates to: LTPRQAGLKGGRDQNDPIRLWRG*RARTQT
Trigger: AGTTTGTGTCCGAGCCCTGCAGCCTCTCCATAAACG...TATTGGGTCATTTTGATCTCTGCCACCCTTTAGCCCTGCCTGCCTTGGAGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp GAAAATCACAAAGCCTTCTCGCCTTTTCTGAGTGGGCGGGATCCACAGCTGGCTCGTGAGTTGTATTTCTaGGAGGGAGTAGCACTTGGA +
Preference number: 4 (lower is better)
Translates to: ENHKAFSPFLSGRDPQLARELYF*EGVALG
Trigger: TCCAAGTGCTACTCCCTCCCAGAAATACAACTCACG...AGCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAGAAGGCTTTGTGATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp TCGTTCTCTTGGGGAGGGAGGAGAGGACACTGTTTACTCAAGCATTTTACTGACTCCTCGGCCCCCAGGTaGAAAAGCAGATCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: SFSWGGRRGHCLLKHFTDSSAPR*KSRSVD
Trigger: ATCCACAGATCTGCTTTTCCACCTGGGGGCCGAGGA...GTCAGTAAAATGCTTGAGTAAACAGTGTCCTCTCCTCCCTCCCCAAGAGAACGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp ATCCAGGAAAGGGCCAAACAGGATGCAGACATCTGGCCGGTCATGGTTGATGACGAGTTGTTTGTTTTCTaGTCCCACCACCTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: IQERAKQDADIWPVMVDDELFVF*SHHLPK
Trigger: TTTGGGGAGGTGGTGGGACCAGAAAACAAACAACTC...GTCATCAACCATGACCGGCCAGATGTCTGCATCCTGTTTGGCCCTTTCCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp GGCAGAGGACAGGCAAGTGTACATATGAAATCTTCCCCAGGTCACCTCTATGTGTGGCAAGAGGGGGACTaGTCTAGGCAGATTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GRGQASVHMKSSPGHLYVWQEGD*SRQIPC
Trigger: ACAAGGAATCTGCCTAGACCAGTCCCCCTCTTGCCA...CACATAGAGGTGACCTGGGGAAGATTTCATATGTACACTTGCCTGTCCTCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CAA 72 bp GAGGAATGTTCCCGGTCTCCCTCGAGAATCACTGACTaGTTGTTCAGCTTCCCGTTGCTATCACAGCCAATC +
Preference number: 4 (lower is better)
Translates to: EECSRSPSRITD*LFSFPLLSQPI
Trigger: GATTGGCTGTGATAGCAACGGGAAGCTGAACAACAAGTCAGTGATTCTCGAGGGAGACCGGGAACATTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp TTGTTGTTCAGCTTCCCGTTGCTATCACAGCCAATCTGGCCCAGCAGAGTGACAAAATCCACTGGAATTTaGGCACCCGAGGAATGTTCC +
Preference number: 4 (lower is better)
Translates to: LLFSFPLLSQPIWPSRVTKSTGI*APEECS
Trigger: GGAACATTCCTCGGGTGCTCAAATTCCAGTGGATTT...TGTCACTCTGCTGGGCCAGATTGGCTGTGATAGCAACGGGAAGCTGAACAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR GCA 90 bp CACAGGGCTATGTCTTGGCTCTTGGCTAAGACTTTAAGGGCCCACACAGCAGAGCTCTGGGTCAAGATGTaGTTGAGTATTCGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: HRAMSWLLAKTLRAHTAELWVKM*LSIRLN
Trigger: ATTCAGCCGAATACTCAAGCACATCTTGACCCAGAG...CTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGCCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp ATCCACAGCTGGCTTACTTCTGGACACGGAGCATGGACTGAGAAGCAAGAGCTTCACCCTCGTAGAGTTTaGTGGCAACAAGTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: IHSWLTSGHGAWTEKQELHPRRV*WQQVSY
Trigger: GTAGGAAACTTGTTGCCACCAAACTCTACGAGGGTG...AAGCTCTTGCTTCTCAGTCCATGCTCCGTGTCCAGAAGTAAGCCAGCTGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp GTTGTTCAGCTTCCCGTTGCTATCACAGCCAATCTGGCCCAGCAGAGTGACAGGCTGATAAAATGGAAGTaGCACACCCTCGTAGAGTTT +
Preference number: 4 (lower is better)
Translates to: VVQLPVAITANLAQQSDRLIKWK*HTLVEF
Trigger: AAACTCTACGAGGGTGTGCCACTTCCATTTTATCAG...CCTGTCACTCTGCTGGGCCAGATTGGCTGTGATAGCAACGGGAAGCTGAACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp CACAGGGCTATGTCTTGGCTCTTGGCTAAGACTTTAAGGGCCCACACAGCAGAGCTGCATCCTCTTCAGTaGGCTGATAAAATGGAAGTG +
Preference number: 4 (lower is better)
Translates to: HRAMSWLLAKTLRAHTAELHPLQ*ADKMEV
Trigger: CACTTCCATTTTATCAGCCCACTGAAGAGGATGCAG...CTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGCCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp TGCGTAAACATAGAACGACTCATAGTCAATGGCCATGTCTTCTTGGGGCGGGTAGTCAGATGTGGTGTATaGTCCACAGGCAACCAGGAC +
Preference number: 4 (lower is better)
Translates to: CVNIERLIVNGHVFLGRVVRCGV*STGNQD
Trigger: GTCCTGGTTGCCTGTGGACCATACACCACATCTGAC...TACCCGCCCCAAGAAGACATGGCCATTGACTATGAGTCGTTCTATGTTTACGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp CTGGTGTTTCTGGGAAAAAGCAGAGTTCAAACCTACCTTCACGAAGTACCTCAGGATGATGAGGACATCTaGGGTGACAGGCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: LVFLGKSRVQTYLHEVPQDDEDI*GDRQLC
Trigger: GCACAGCTGCCTGTCACCCCAGATGTCCTCATCATC...CTGAGGTACTTCGTGAAGGTAGGTTTGAACTCTGCTTTTTCCCAGAAACACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp GAAAATCACAAAGCCTTCTCGCCTTTTCTGAGTGGGCGGGATCCACAGCTGGCTGTGAGAGGCAAAAGTTaGCCACTGTTAGGTCATCTA +
Preference number: 4 (lower is better)
Translates to: ENHKAFSPFLSGRDPQLAVRGKS*PLLGHL
Trigger: TAGATGACCTAACAGTGGCCAACTTTTGCCTCTCAC...AGCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAGAAGGCTTTGTGATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265465.8
3UTR CAA 72 bp AACTGTTCACCTTGTCACAGGGCTATGTCTTGGCTCTaGGCTAAGACTTTAAGGGCCCACACAGCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: NCSPCHRAMSWL*AKTLRAHTAEN
Trigger: GTTCTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGCCCTGTGACAAGGTGAACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp GAAAATCACAAAGCCTTCTCGCCTTTTCTGAGTGGGCGGGATCCACAGCTGGCTGGGCTAGCAAAGGAGTaGAAGCTTCAATCTTGTAAT +
Preference number: 4 (lower is better)
Translates to: ENHKAFSPFLSGRDPQLAGLAKE*KLQSCN
Trigger: ATTACAAGATTGAAGCTTTCACTCCTTTGCTAGCCC...AGCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAGAAGGCTTTGTGATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp TGCGTAAACATAGAACGACTCATAGTCAATGGCCATGTCTTCTTGGGGCGGGTAAATGTCTCTAGCTCCTaGATGGCCACTGTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: CVNIERLIVNGHVFLGRVNVSSS*MATVLA
Trigger: TGCAAGGACAGTGGCCATGCAGGAGCTAGAGACATT...TACCCGCCCCAAGAAGACATGGCCATTGACTATGAGTCGTTCTATGTTTACGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp GGCAGAGGACAGGCAAGTGTACATATGAAATCTTCCCCAGGTCACCTCTATGTGCGTGAGTTGTATTTCTaGGAGGGAGTAGCACTTGGA +
Preference number: 4 (lower is better)
Translates to: GRGQASVHMKSSPGHLYVRELYF*EGVALG
Trigger: TCCAAGTGCTACTCCCTCCCAGAAATACAACTCACG...CACATAGAGGTGACCTGGGGAAGATTTCATATGTACACTTGCCTGTCCTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp CTAACTCCAAGGCAGGCAGGGCTAAAGGGTGGCAGAGATCAAAATGACCCAATACACCCTCGTAGAGTTTaGTGGCAACAAGTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: LTPRQAGLKGGRDQNDPIHPRRV*WQQVSY
Trigger: GTAGGAAACTTGTTGCCACCAAACTCTACGAGGGTG...TATTGGGTCATTTTGATCTCTGCCACCCTTTAGCCCTGCCTGCCTTGGAGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp TTGTTGTTCAGCTTCCCGTTGCTATCACAGCCAATCTGGCCCAGCAGAGTGACACTGCATCCTCTTCAGTaGGCTGATAAAATGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LLFSFPLLSQPIWPSRVTLHPLQ*ADKMEV
Trigger: CACTTCCATTTTATCAGCCCACTGAAGAGGATGCAG...TGTCACTCTGCTGGGCCAGATTGGCTGTGATAGCAACGGGAAGCTGAACAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp AAGATGTGCTTGAGTATTCGGCTGAATCTGTCTGAAGTTCCGGAAGAACTACTGGGTGGCAGAACTGAGTaGCCGGAAAAACCCGCCAAA +
Preference number: 4 (lower is better)
Translates to: KMCLSIRLNLSEVPEELLGGRTE*PEKPAK
Trigger: TTTGGCGGGTTTTTCCGGCCACTCAGTTCTGCCACC...CAGTAGTTCTTCCGGAACTTCAGACAGATTCAGCCGAATACTCAAGCACATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CAA 72 bp TTCCCAGCTGAGCCCACTTGGAGGTCATATCAGAATTaGGGAGGCAGAGGACAGGCAAGTGTACATATGAAA +
Preference number: 4 (lower is better)
Translates to: FPAEPTWRSYQN*GGRGQASVHMK
Trigger: TTTCATATGTACACTTGCCTGTCCTCTGCCTCCCAAATTCTGATATGACCTCCAAGTGGGCTCAGCTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp GAAAATCACAAAGCCTTCTCGCCTTTTCTGAGTGGGCGGGATCCACAGCTGGCTTTCGTAGACACTGCTTaGAAATGTCTTCAAATGGAC +
Preference number: 4 (lower is better)
Translates to: ENHKAFSPFLSGRDPQLAFVDTA*KCLQMD
Trigger: GTCCATTTGAAGACATTTTCAAGCAGTGTCTACGAA...AGCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAGAAGGCTTTGTGATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp ATCCAGGAAAGGGCCAAACAGGATGCAGACATCTGGCCGGTCATGGTTGATGACTTCGTAGACACTGCTTaGAAATGTCTTCAAATGGAC +
Preference number: 4 (lower is better)
Translates to: IQERAKQDADIWPVMVDDFVDTA*KCLQMD
Trigger: GTCCATTTGAAGACATTTTCAAGCAGTGTCTACGAA...GTCATCAACCATGACCGGCCAGATGTCTGCATCCTGTTTGGCCCTTTCCTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR GCA 90 bp GCTGTCAGATGTGGTGTATGGTCCACAGGCAACCAGGACCATGCTTTGCTCAAATCCTTGCAGGTACTATaGCTGGCTTTCGATAATCTT +
Preference number: 4 (lower is better)
Translates to: AVRCGVWSTGNQDHALLKSLQVL*LAFDNL
Trigger: AAGATTATCGAAAGCCAGGCATAGTACCTGCAAGGA...TTTGAGCAAAGCATGGTCCTGGTTGCCTGTGGACCATACACCACATCTGACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR GCA 90 bp ATCCACAGCTGGCTTACTTCTGGACACGGAGCATGGACTGAGAAGCAAGAGCTTGACACAAACTGTACTTaGTTTTTGTCCTCTCGAGAC +
Preference number: 4 (lower is better)
Translates to: IHSWLTSGHGAWTEKQELDTNCT*FLSSRD
Trigger: GTCTCGAGAGGACAAAAAGCAAGTACAGTTTGTGTC...AAGCTCTTGCTTCTCAGTCCATGCTCCGTGTCCAGAAGTAAGCCAGCTGTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR GCA 90 bp CTGTGCGTAAACATAGAACGACTCATAGTCAATGGCCATGTCTTCTTGGGGCGGCTCTGGGTCAAGATGTaGTTGAGTATTCGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LCVNIERLIVNGHVFLGRLWVKM*LSIRLN
Trigger: ATTCAGCCGAATACTCAAGCACATCTTGACCCAGAG...CCGCCCCAAGAAGACATGGCCATTGACTATGAGTCGTTCTATGTTTACGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp GCTATGTCTTGGCTCTTGGCTAAGACTTTAAGGGCCCACACAGCAGAGAACAGCAACCCTTTGAAGGTGTaGTGTAAGAGTTCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: AMSWLLAKTLRAHTAENSNPLKV*CKSSRG
Trigger: TCCTCTTGAACTCTTACACCACACCTTCAAAGGGTT...GCTGTTCTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp AACAGGATGCAGACATCTGGCCGGTCATGGTTGATGACAGCAATCAGGTCAAGCGGAGCTTCTGAAACATaGATTTGTAGCTCCCAGTTA +
Preference number: 4 (lower is better)
Translates to: NRMQTSGRSWLMTAIRSSGASET*ICSSQL
Trigger: TAACTGGGAGCTACAAATCCATGTTTCAGAAGCTCC...GCTTGACCTGATTGCTGTCATCAACCATGACCGGCCAGATGTCTGCATCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp TGCGTAAACATAGAACGACTCATAGTCAATGGCCATGTCTTCTTGGGGCGGGTAAGTGGGCTGATAAAATaGAAGTGGCACACCCTCGTA +
Preference number: 4 (lower is better)
Translates to: CVNIERLIVNGHVFLGRVSGLIK*KWHTLV
Trigger: TACGAGGGTGTGCCACTTCCATTTTATCAGCCCACT...TACCCGCCCCAAGAAGACATGGCCATTGACTATGAGTCGTTCTATGTTTACGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp ATCCACAGCTGGCTTACTTCTGGACACGGAGCATGGACTGAGAAGCAAGAGCTTTCATTCTGTCCATACTaGACACAAAGCTCTACCAAT +
Preference number: 4 (lower is better)
Translates to: IHSWLTSGHGAWTEKQELSFCPY*TQSSTN
Trigger: ATTGGTAGAGCTTTGTGTTCAGTATGGACAGAATGA...AAGCTCTTGCTTCTCAGTCCATGCTCCGTGTCCAGAAGTAAGCCAGCTGTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp CTAACTCCAAGGCAGGCAGGGCTAAAGGGTGGCAGAGATCAAAATGACCCAATAGGGCTAGCAAAGGAGTaGAAGCTTCAATCTTGTAAT +
Preference number: 4 (lower is better)
Translates to: LTPRQAGLKGGRDQNDPIGLAKE*KLQSCN
Trigger: ATTACAAGATTGAAGCTTTCACTCCTTTGCTAGCCC...TATTGGGTCATTTTGATCTCTGCCACCCTTTAGCCCTGCCTGCCTTGGAGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp GCTCGGACACAAACTGTACTTGCTTTTTGTCCTCTCGAGACAGATCGGAGTAGCTGGCAGAGATCAAAATaGCCCAATAGCTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: ARTQTVLAFCPLETDRSSWQRSK*PNSFFK
Trigger: CTTGAAGAAGCTATTGGGTCATTTTGATCTCTGCCA...GCTACTCCGATCTGTCTCGAGAGGACAAAAAGCAAGTACAGTTTGTGTCCGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR GCA 90 bp GGCAGAGGACAGGCAAGTGTACATATGAAATCTTCCCCAGGTCACCTCTATGTGGACACAAACTGTACTTaGTTTTTGTCCTCTCGAGAC +
Preference number: 4 (lower is better)
Translates to: GRGQASVHMKSSPGHLYVDTNCT*FLSSRD
Trigger: GTCTCGAGAGGACAAAAAGCAAGTACAGTTTGTGTC...CACATAGAGGTGACCTGGGGAAGATTTCATATGTACACTTGCCTGTCCTCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp GCTCGGACACAAACTGTACTTGCTTTTTGTCCTCTCGAGACAGATCGGAGTAGCTGCAGGTACTATGCCTaGCTTTCGATAATCTTTTGC +
Preference number: 4 (lower is better)
Translates to: ARTQTVLAFCPLETDRSSCRYYA*LSIIFC
Trigger: GCAAAAGATTATCGAAAGCCAGGCATAGTACCTGCA...GCTACTCCGATCTGTCTCGAGAGGACAAAAAGCAAGTACAGTTTGTGTCCGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp CTAACTCCAAGGCAGGCAGGGCTAAAGGGTGGCAGAGATCAAAATGACCCAATAGGGTTCTGGTGTTTCTaGGAAAAAGCAGAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: LTPRQAGLKGGRDQNDPIGFWCF*EKAEFK
Trigger: TTTGAACTCTGCTTTTTCCCAGAAACACCAGAACCC...TATTGGGTCATTTTGATCTCTGCCACCCTTTAGCCCTGCCTGCCTTGGAGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CAA 72 bp AAGGAGGTAACCACTTCTCCTCGGTTACTTCGTGAGTaGTATTTCTGGGAGGGAGTAGCACTTGGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: KEVTTSPRLLRE*YFWEGVALGEK
Trigger: TTTCTCTCCAAGTGCTACTCCCTCCCAGAAATACAACTCACGAAGTAACCGAGGAGAAGTGGTTACCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp TGCGTAAACATAGAACGACTCATAGTCAATGGCCATGTCTTCTTGGGGCGGGTATCTTGTAATGTTCCTTaGGTTCGCTGCCAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: CVNIERLIVNGHVFLGRVSCNVP*VRCQVL
Trigger: AAGAACTTGGCAGCGAACTCAAGGAACATTACAAGA...TACCCGCCCCAAGAAGACATGGCCATTGACTATGAGTCGTTCTATGTTTACGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp AAGATGTGCTTGAGTATTCGGCTGAATCTGTCTGAAGTTCCGGAAGAACTACTGTCGGCTGAATCTGTCTaGAGTTCCGGAAGAACTACT +
Preference number: 4 (lower is better)
Translates to: KMCLSIRLNLSEVPEELLSAESV*SSGRTT
Trigger: AGTAGTTCTTCCGGAACTTCAGACAGATTCAGCCGA...CAGTAGTTCTTCCGGAACTTCAGACAGATTCAGCCGAATACTCAAGCACATCTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR TCA 90 bp AAGATGTGCTTGAGTATTCGGCTGAATCTGTCTGAAGTTCCGGAAGAACTACTGAGGCAAGTGTACATATaGAATCTTCCCCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: KMCLSIRLNLSEVPEELLRQVYI*NLPQVT
Trigger: GGTGACCTGGGGAAGATTTCATATGTACACTTGCCT...CAGTAGTTCTTCCGGAACTTCAGACAGATTCAGCCGAATACTCAAGCACATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp TGCGTAAACATAGAACGACTCATAGTCAATGGCCATGTCTTCTTGGGGCGGGTAAACCCTTTGAAGGTGTaGTGTAAGAGTTCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: CVNIERLIVNGHVFLGRVNPLKV*CKSSRG
Trigger: TCCTCTTGAACTCTTACACCACACCTTCAAAGGGTT...TACCCGCCCCAAGAAGACATGGCCATTGACTATGAGTCGTTCTATGTTTACGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp TGCGTAAACATAGAACGACTCATAGTCAATGGCCATGTCTTCTTGGGGCGGGTATCAAAGACTGGGTTCTaGTGTTTCTGGGAAAAAGCA +
Preference number: 4 (lower is better)
Translates to: CVNIERLIVNGHVFLGRVSKTGF*CFWEKA
Trigger: TGCTTTTTCCCAGAAACACCAGAACCCAGTCTTTGA...TACCCGCCCCAAGAAGACATGGCCATTGACTATGAGTCGTTCTATGTTTACGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR GCA 90 bp ATCCACAGCTGGCTTACTTCTGGACACGGAGCATGGACTGAGAAGCAAGAGCTTCTTTCGATAATCTTTTaGTCAGAAACTCATGCTCAA +
Preference number: 4 (lower is better)
Translates to: IHSWLTSGHGAWTEKQELLSIIF*SETHAQ
Trigger: TTGAGCATGAGTTTCTGAGCAAAAGATTATCGAAAG...AAGCTCTTGCTTCTCAGTCCATGCTCCGTGTCCAGAAGTAAGCCAGCTGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CCA 90 bp TTTCCTACCAGTGGTGTTGATTCCTTCCATAATTACAACCTGTCCAGGAAACAGCCTCGTAGAGTTTGGTaGCAACAAGTTTCCTACCAG +
Preference number: 4 (lower is better)
Translates to: FPTSGVDSFHNYNLSRKQPRRVW*QQVSYQ
Trigger: CTGGTAGGAAACTTGTTGCCACCAAACTCTACGAGG...CTGTTTCCTGGACAGGTTGTAATTATGGAAGGAATCAACACCACTGGTAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CAA 72 bp ATTCCATTTCACCGTCAGAAAGGTGAGAGGCAAAAGTaGGCCACTGTTAGGTCATCTATTTATCTCGGAGTC +
Preference number: 4 (lower is better)
Translates to: IPFHRQKGERQK*ATVRSSIYLGV
Trigger: GACTCCGAGATAAATAGATGACCTAACAGTGGCCAACTTTTGCCTCTCACCTTTCTGACGGTGAAATGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR TCA 90 bp CCGGAGCTTCTTGTGCCTTCAATAATTGTTCGTAGACACTGCTTGAAAATGTCTCTTCTGAGAACCCTTTaGAGGTGTGGTGTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: PELLVPSIIVRRHCLKMSLLRTL*RCGVRV
Trigger: AACTCTTACACCACACCTTCAAAGGGTTCTCAGAAG...AGACATTTTCAAGCAGTGTCTACGAACAATTATTGAAGGCACAAGAAGCTCCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CCA 90 bp AAGATGTGCTTGAGTATTCGGCTGAATCTGTCTGAAGTTCCGGAAGAACTACTGAACTTCTCGAATGTCTaGGAGCTTCTGAAACATGGA +
Preference number: 4 (lower is better)
Translates to: KMCLSIRLNLSEVPEELLNFSNV*ELLKHG
Trigger: TCCATGTTTCAGAAGCTCCCAGACATTCGAGAAGTT...CAGTAGTTCTTCCGGAACTTCAGACAGATTCAGCCGAATACTCAAGCACATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
3UTR CAA 72 bp GCCTTCTCTGGACATAGGTCAAATAGGCAACATTCTTaGTCTACTACCAGGATAAAGAAAATAGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: AFSGHRSNRQHS*STTRIKKIEER
Trigger: CCTTTCTTCTATTTTCTTTATCCTGGTAGTAGACAAAGAATGTTGCCTATTTGACCTATGTCCAGAGAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS CCA 90 bp CGAAGATCTGCAGCTCCTCCGCCAGCTGCTGGGCGGATGCGGACATaGTCGCCCAAGCCAGGGGCCGGGGAGCCGGCCCACCCAGCTCCG +
Preference number: 5 (lower is better)
Translates to: RRSAAPPPAAGRMRT*SPKPGAGEPAHPAP
Trigger: CGGAGCTGGGTGGGCCGGCTCCCCGGCCCCTGGCTTGGGCGACCATGTCCGCATCCGCCCAGCAGCTGGCGGAGGAGCTGCAGATCTTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265465.8
ENST00000527850.5
ENST00000532469.1
CDS GCA 90 bp GCCTCCTCGCAGTCTAGGCCGAAGATCTGCAGCTCCTCCGCCAGCTaGTGGGCGGATGCGGACATGGTCGCCCAAGCCAGGGGCCGGGGA +
Preference number: 5 (lower is better)
Translates to: ASSQSRPKICSSSAS*WADADMVAQARGRG
Trigger: TCCCCGGCCCCTGGCTTGGGCGACCATGTCCGCATCCGCCCAGCAGCTGGCGGAGGAGCTGCAGATCTTCGGCCTAGACTGCGAGGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265465.8
ENST00000527850.5
ENST00000532469.1
CDS CCA 90 bp TCCTCGCAGTCTAGGCCGAAGATCTGCAGCTCCTCCGCCAGCTGCTaGGCGGATGCGGACATGGTCGCCCAAGCCAGGGGCCGGGGAGCC +
Preference number: 5 (lower is better)
Translates to: SSQSRPKICSSSASC*ADADMVAQARGRGA
Trigger: GGCTCCCCGGCCCCTGGCTTGGGCGACCATGTCCGCATCCGCCCAGCAGCTGGCGGAGGAGCTGCAGATCTTCGGCCTAGACTGCGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265465.8
ENST00000527850.5
ENST00000532469.1
CDS-3UTR CAA 90 bp GCAGGCCCGGCTGCACAAGTCCTCCCTGCTGGGCCTGGTCACTGCAGCTGCCCCCCTCCCACCTGCCCTTaGGTAAGGCGCCCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: AGPAAQVLPAGPGHCSCPPPTCP*VRRPGF
Trigger: GAACCCTGGGCGCCTTACCAAAGGGCAGGTGGGAGG...GGGGCAGCTGCAGTGACCAGGCCCAGCAGGGAGGACTTGTGCAGCCGGGCCTGC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CAA 90 bp CAGCTGCCACCAGGACTCCAGCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCATGGGGTTTGCCGGTCTaGGCTCTGGCATGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: QLPPGLQLWNSPARRPPPWGLPV*ALACEA
Trigger: TGCCTCACATGCCAGAGCCAAGACCGGCAAACCCCA...TGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGCTGGAGTCCTGGTGGCAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CAA 90 bp CAGCTGCCACCAGGACTCCAGCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCAACCCAACTGTTCACCTaGTCACAGGGCTATGTCTTG +
Preference number: 5 (lower is better)
Translates to: QLPPGLQLWNSPARRPPPTQLFT*SQGYVL
Trigger: CAAGACATAGCCCTGTGACAAGGTGAACAGTTGGGT...TGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGCTGGAGTCCTGGTGGCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CAA 90 bp GGTTTGCCGGTCTTGGCTCTGGCATGTGAGGCAGGACAGCCTGCCAGCTTAGGGCATGCAGCCAGTTGCTaGCTCTGCAGCCCAGCTCTA +
Preference number: 5 (lower is better)
Translates to: GLPVLALACEAGQPASLGHAASC*LCSPAL
Trigger: TAGAGCTGGGCTGCAGAGCAAGCAACTGGCTGCATG...CCCTAAGCTGGCAGGCTGTCCTGCCTCACATGCCAGAGCCAAGACCGGCAAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CAA 90 bp CACTCAGAGGCAGGCCCGGCTGCACAAGTCCTCCCTGCTGGGCCTGGTCACTGCGGTGAGAGGCAAAAGTaGGCCACTGTTAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: HSEAGPAAQVLPAGPGHCGERQK*ATVRSS
Trigger: AGATGACCTAACAGTGGCCAACTTTTGCCTCTCACC...GCAGTGACCAGGCCCAGCAGGGAGGACTTGTGCAGCCGGGCCTGCCTCTGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS GCA 90 bp ACCAATTTCTCAATTAGAGCCTCCTCGCAGTCTAGGCCGAAGATCTaGAGCTCCTCCGCCAGCTGCTGGGCGGATGCGGACATGGTCGCC +
Preference number: 5 (lower is better)
Translates to: TNFSIRASSQSRPKI*SSSASCWADADMVA
Trigger: GGCGACCATGTCCGCATCCGCCCAGCAGCTGGCGGAGGAGCTGCAGATCTTCGGCCTAGACTGCGAGGAGGCTCTAATTGAGAAATTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265465.8
ENST00000532469.1
CDS-3UTR CAA 90 bp GGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCACCAGTTGTTCAGCTTCCCGTaGCTATCACAGCCAATCTGG +
Preference number: 5 (lower is better)
Translates to: GLQASPGYCATWQSSCHQLFSFP*LSQPIW
Trigger: CCAGATTGGCTGTGATAGCAACGGGAAGCTGAACAA...CTGGTGGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CAA 90 bp GTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCTCTGGCCGGTCATGGTaGATGACAGCAATCAGGTCA +
Preference number: 5 (lower is better)
Translates to: VLGCRQALATARLGKAAASGRSW*MTAIRS
Trigger: TGACCTGATTGCTGTCATCAACCATGACCGGCCAGA...GGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CAA 90 bp GGTTTGCCGGTCTTGGCTCTGGCATGTGAGGCAGGACAGCCTGCCAGCTTAGGGAATGGCCATGTCTTCTaGGGGCGGGTAGAGTGGGTA +
Preference number: 5 (lower is better)
Translates to: GLPVLALACEAGQPASLGNGHVF*GRVEWV
Trigger: TACCCACTCTACCCGCCCCAAGAAGACATGGCCATT...CCCTAAGCTGGCAGGCTGTCCTGCCTCACATGCCAGAGCCAAGACCGGCAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS GCA 90 bp GAAAATTTCTCAATTAGAGCCTCCTCGCAGTCTAGGCCGAAGATCTaGAGCTCCTCCGCCAGCTGCTGGGCGGATGCGGACATGGTCGCC +
Preference number: 5 (lower is better)
Translates to: ENFSIRASSQSRPKI*SSSASCWADADMVA
Trigger: GGCGACCATGTCCGCATCCGCCCAGCAGCTGGCGGAGGAGCTGCAGATCTTCGGCCTAGACTGCGAGGAGGCTCTAATTGAGAAATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS CCA 90 bp CTTGGCTGCAGAAAGGGCTGGGACCAGAAAGCCAGTCATCCTGCTTaGGGCCTGGAACACACTTCTTACCTACTGATCTCCTCGGCCCCC +
Preference number: 5 (lower is better)
Translates to: LGCRKGWDQKASHPA*GLEHTSYLLISSAP
Trigger: GGGGGCCGAGGAGATCAGTAGGTAAGAAGTGTGTTCCAGGCCCCAAGCAGGATGACTGGCTTTCTGGTCCCAGCCCTTTCTGCAGCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533192.1
CDS-3UTR CAA 90 bp GCAGGCCCGGCTGCACAAGTCCTCCCTGCTGGGCCTGGTCACTGCAGCTGCCCCGCTTTCGATAATCTTTaGCTCAGAAACTCATGCTCA +
Preference number: 5 (lower is better)
Translates to: AGPAAQVLPAGPGHCSCPAFDNL*LRNSCS
Trigger: TGAGCATGAGTTTCTGAGCAAAAGATTATCGAAAGC...GGGGCAGCTGCAGTGACCAGGCCCAGCAGGGAGGACTTGTGCAGCCGGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CAA 90 bp GGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCACCAGTGGGTCAAGATGTGCTaGAGTATTCGGCTGAATCTG +
Preference number: 5 (lower is better)
Translates to: GLQASPGYCATWQSSCHQWVKMC*SIRLNL
Trigger: CAGATTCAGCCGAATACTCAAGCACATCTTGACCCA...CTGGTGGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CAA 90 bp GTTCTGGGCTGCAGGCAAGCCCTGGCTACTGCGCGACTTGGCAAAGCAGCTGCCGCTTCTGAGAACCCTTaGAAGGTGTGGTGTAAGAGT +
Preference number: 5 (lower is better)
Translates to: VLGCRQALATARLGKAAAASENP*KVWCKS
Trigger: ACTCTTACACCACACCTTCAAAGGGTTCTCAGAAGC...GGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCAGGGCTTGCCTGCAGCCCAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS GCA 90 bp AGGGAGCAGAAATCTCGAGAGGACGCTCTCCTGGTGAGAACGTCCTaGTTCCCAAAAGCTACCGCTGAGCTTCTCAGTGACGGTGGCAGA +
Preference number: 5 (lower is better)
Translates to: REQKSREDALLVRTS*FPKATAELLSDGGR
Trigger: TCTGCCACCGTCACTGAGAAGCTCAGCGGTAGCTTTTGGGAAGCAGGACGTTCTCACCAGGAGAGCGTCCTCTCGAGATTTCTGCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265465.8
ENST00000527850.5
ENST00000532469.1
CDS-3UTR CAA 90 bp GGTTTGCCGGTCTTGGCTCTGGCATGTGAGGCAGGACAGCCTGCCAGCTTAGGGCGGTTACTTCGTGAGTaGTATTTCTGGGAGGGAGTA +
Preference number: 5 (lower is better)
Translates to: GLPVLALACEAGQPASLGRLLRE*YFWEGV
Trigger: TACTCCCTCCCAGAAATACAACTCACGAAGTAACCG...CCCTAAGCTGGCAGGCTGTCCTGCCTCACATGCCAGAGCCAAGACCGGCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CAA 90 bp ATCCACAGCTGGCTTACTTCTGGACACGGAGCATGGACTGAGAAGCAAGAGCTTCCTGACAGCTGGGGTTaGCCGGTCTTGGCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: IHSWLTSGHGAWTEKQELPDSWG*PVLALA
Trigger: TGCCAGAGCCAAGACCGGCAAACCCCAGCTGTCAGG...AAGCTCTTGCTTCTCAGTCCATGCTCCGTGTCCAGAAGTAAGCCAGCTGTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS CCA 90 bp CAGCTTGCAGTGGTCATTTTGTCAGCTCTGTCAGCTTGTCCTTCTTaGAGACTGTGCCAGGTACCAGGCCCCCACACAGTCAACAGGGCT +
Preference number: 5 (lower is better)
Translates to: QLAVVILSALSACPS*RLCQVPGPHTVNRA
Trigger: AGCCCTGTTGACTGTGTGGGGGCCTGGTACCTGGCACAGTCTCCAAGAAGGACAAGCTGACAGAGCTGACAAAATGACCACTGCAAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525924.1
CDS-3UTR CAA 90 bp CAGCTTTGGAACAGCCCAGCGAGGCGGCCCCCTCCAGATGGAGAGGTCAGGCTGTTCCTACCAGTGGTGTaGATTCCTTCCATAATTACA +
Preference number: 5 (lower is better)
Translates to: QLWNSPARRPPPDGEVRLFLPVV*IPSIIT
Trigger: TGTAATTATGGAAGGAATCAACACCACTGGTAGGAA...CAGCCTGACCTCTCCATCTGGAGGGGGCCGCCTCGCTGGGCTGTTCCAAAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CAA 90 bp GGTTTGCCGGTCTTGGCTCTGGCATGTGAGGCAGGACAGCCTGCCAGCTTAGGGGGACACAAACTGTACTaGCTTTTTGTCCTCTCGAGA +
Preference number: 5 (lower is better)
Translates to: GLPVLALACEAGQPASLGGHKLY*LFVLSR
Trigger: TCTCGAGAGGACAAAAAGCAAGTACAGTTTGTGTCC...CCCTAAGCTGGCAGGCTGTCCTGCCTCACATGCCAGAGCCAAGACCGGCAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CAA 90 bp ATCCACAGCTGGCTTACTTCTGGACACGGAGCATGGACTGAGAAGCAAGAGCTTTGGCTACTGCGCGACTaGGCAAAGCAGCTGCCACCA +
Preference number: 5 (lower is better)
Translates to: IHSWLTSGHGAWTEKQELWLLRD*AKQLPP
Trigger: TGGTGGCAGCTGCTTTGCCAAGTCGCGCAGTAGCCA...AAGCTCTTGCTTCTCAGTCCATGCTCCGTGTCCAGAAGTAAGCCAGCTGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CAA 90 bp ATCCACAGCTGGCTTACTTCTGGACACGGAGCATGGACTGAGAAGCAAGAGCTTGCATGGCCACTGTCCTaGCAGGTACTATGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: IHSWLTSGHGAWTEKQELAWPLS*QVLCLA
Trigger: AGCCAGGCATAGTACCTGCAAGGACAGTGGCCATGC...AAGCTCTTGCTTCTCAGTCCATGCTCCGTGTCCAGAAGTAAGCCAGCTGTGGAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CAA 90 bp CGTGATGCTGTCAGATGTGGTGTATGGTCCACAGGCAACCAGGACCATGCTTTGAATGGCCATGTCTTCTaGGGGCGGGTAGAGTGGGTA +
Preference number: 5 (lower is better)
Translates to: RDAVRCGVWSTGNQDHALNGHVF*GRVEWV
Trigger: TACCCACTCTACCCGCCCCAAGAAGACATGGCCATT...CAAAGCATGGTCCTGGTTGCCTGTGGACCATACACCACATCTGACAGCATCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CAA 90 bp GCTATGTCTTGGCTCTTGGCTAAGACTTTAAGGGCCCACACAGCAGAGAACAGCATAGACACCAGCAGCTaGCTGCCCCCTTGCCCACTT +
Preference number: 5 (lower is better)
Translates to: AMSWLLAKTLRAHTAENSIDTSS*LPPCPL
Trigger: AAGTGGGCAAGGGGGCAGCAAGCTGCTGGTGTCTAT...GCTGTTCTCTGCTGTGTGGGCCCTTAAAGTCTTAGCCAAGAGCCAAGACATAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS CCA 90 bp GGCCTGGAACACACTTCTTACCTACTGATCTCCTCGGCCCCCAGGTaGAAAAGCAGATCTGTGGATGTCAAGCCGAAGATCACTCCGTTT +
Preference number: 5 (lower is better)
Translates to: GLEHTSYLLISSAPR*KSRSVDVKPKITPF
Trigger: AAACGGAGTGATCTTCGGCTTGACATCCACAGATCTGCTTTTCCACCTGGGGGCCGAGGAGATCAGTAGGTAAGAAGTGTGTTCCAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533192.1
CDS-3UTR CAA 90 bp CTGTGCGTAAACATAGAACGACTCATAGTCAATGGCCATGTCTTCTTGGGGCGGGCATGGCCACTGTCCTaGCAGGTACTATGCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LCVNIERLIVNGHVFLGRAWPLS*QVLCLA
Trigger: AGCCAGGCATAGTACCTGCAAGGACAGTGGCCATGC...CCGCCCCAAGAAGACATGGCCATTGACTATGAGTCGTTCTATGTTTACGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS CCA 90 bp ATCACTGACTTGTTGTTCAGCTTCCCGTTGCTATCACAGCCAATCTaGCCCAGCAGAGTGACAGGCTCCTACCAAAGGAAGGTCACAGCA +
Preference number: 5 (lower is better)
Translates to: ITDLLFSFPLLSQPI*PSRVTGSYQRKVTA
Trigger: TGCTGTGACCTTCCTTTGGTAGGAGCCTGTCACTCTGCTGGGCCAGATTGGCTGTGATAGCAACGGGAAGCTGAACAACAAGTCAGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527618.5
CDS-3UTR CAA 90 bp CCTGGTCAGGTCTGGGGCTCGATTCCATTTCACCGTCAGAAAGGTGAGAGGCAAGATGGGGGCTACGAGTaGACACACTCCTTTTTGTTA +
Preference number: 5 (lower is better)
Translates to: PGQVWGSIPFHRQKGERQDGGYE*THSFLL
Trigger: TAACAAAAAGGAGTGTGTCAACTCGTAGCCCCCATC...TTGCCTCTCACCTTTCTGACGGTGAAATGGAATCGAGCCCCAGACCTGACCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CAA 90 bp CCTGGTCAGGTCTGGGGCTCGATTCCATTTCACCGTCAGAAAGGTGAGAGGCAATCGAGAATCACTGACTaGTTGTTCAGCTTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: PGQVWGSIPFHRQKGERQSRITD*LFSFPL
Trigger: CAACGGGAAGCTGAACAACAAGTCAGTGATTCTCGA...TTGCCTCTCACCTTTCTGACGGTGAAATGGAATCGAGCCCCAGACCTGACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CAA 90 bp AACAGGATGCAGACATCTGGCCGGTCATGGTTGATGACAGCAATCAGGTCAAGCTCTGGCCGGTCATGGTaGATGACAGCAATCAGGTCA +
Preference number: 5 (lower is better)
Translates to: NRMQTSGRSWLMTAIRSSSGRSW*MTAIRS
Trigger: TGACCTGATTGCTGTCATCAACCATGACCGGCCAGA...GCTTGACCTGATTGCTGTCATCAACCATGACCGGCCAGATGTCTGCATCCTGTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CAA 90 bp GGATGTCAAGCCGAAGATCACTCCGTTTATGGAGAGGCTGCAGGGCTCGGACACAACTGTACTTGCTTTTaGTCCTCTCGAGACAGATCG +
Preference number: 5 (lower is better)
Translates to: GCQAEDHSVYGEAAGLGHNCTCF*SSRDRS
Trigger: CGATCTGTCTCGAGAGGACAAAAAGCAAGTACAGTT...GTGTCCGAGCCCTGCAGCCTCTCCATAAACGGAGTGATCTTCGGCTTGACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CAA 90 bp GGGCAGGAAGCCACTCCACGTCTGGCCAGTGACAGCTTTTCCCCAGATGCCAGGAATAGGCAACATTCTTaGTCTACTACCAGGATAAAG +
Preference number: 5 (lower is better)
Translates to: GQEATPRLASDSFSPDARNRQHS*STTRIK
Trigger: CTTTATCCTGGTAGTAGACAAAGAATGTTGCCTATT...CCTGGCATCTGGGGAAAAGCTGTCACTGGCCAGACGTGGAGTGGCTTCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS TCA 90 bp TGTTCAGCTTCCCGTTGCTATCACAGCCAATCTGGCCCAGCAGAGTaGCAGGCTCCTACCAAAGGAAGGTCACAGCATAAGAATGACAGT +
Preference number: 5 (lower is better)
Translates to: CSASRCYHSQSGPAE*QAPTKGRSQHKNDS
Trigger: ACTGTCATTCTTATGCTGTGACCTTCCTTTGGTAGGAGCCTGTCACTCTGCTGGGCCAGATTGGCTGTGATAGCAACGGGAAGCTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527618.5
CDS TCA 90 bp ATCCCCGGGGAGCTACCTGACTCACCACCAAGGGAAACAAGGCCTTaGGTCTCTGCTTATGTGCAAGACTCTAATCCAAGTGGGAAGAAA +
Preference number: 5 (lower is better)
Translates to: IPGELPDSPPRETRP*VSAYVQDSNPSGKK
Trigger: TTTCTTCCCACTTGGATTAGAGTCTTGCACATAAGCAGAGACTCAAGGCCTTGTTTCCCTTGGTGGTGAGTCAGGTAGCTCCCCGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532469.1
CDS-3UTR CAA 90 bp GAAAATCACAAAGCCTTCTCGCCTTTTCTGAGTGGGCGGGATCCACAGCTGGCTCACTTGGAGAGAAACTaGACGGTGAGAGTAGCTGAT +
Preference number: 5 (lower is better)
Translates to: ENHKAFSPFLSGRDPQLAHLERN*TVRVAD
Trigger: ATCAGCTACTCTCACCGTCAAGTTTCTCTCCAAGTG...AGCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAGAAGGCTTTGTGATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CAA 90 bp GCTGTCAGATGTGGTGTATGGTCCACAGGCAACCAGGACCATGCTTTGCTCAAATTGTTCAGCTTCCCGTaGCTATCACAGCCAATCTGG +
Preference number: 5 (lower is better)
Translates to: AVRCGVWSTGNQDHALLKLFSFP*LSQPIW
Trigger: CCAGATTGGCTGTGATAGCAACGGGAAGCTGAACAA...TTTGAGCAAAGCATGGTCCTGGTTGCCTGTGGACCATACACCACATCTGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CAA 90 bp GACAGCAATCAGGTCAAGCAGGGGGTCATACGTGATGCTGTCAGATGTGGTGTAGCTTCTGAGAACCCTTaGAAGGTGTGGTGTAAGAGT +
Preference number: 5 (lower is better)
Translates to: DSNQVKQGVIRDAVRCGVASENP*KVWCKS
Trigger: ACTCTTACACCACACCTTCAAAGGGTTCTCAGAAGC...TACACCACATCTGACAGCATCACGTATGACCCCCTGCTTGACCTGATTGCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CAA 90 bp CTGTGGATGTCAAGCCGAAGATCACTCCGTTTATGGAGAGGCTGCAGGGCTCGGTTCCTACCAGTGGTGTaGATTCCTTCCATAATTACA +
Preference number: 5 (lower is better)
Translates to: LWMSSRRSLRLWRGCRARFLPVV*IPSIIT
Trigger: TGTAATTATGGAAGGAATCAACACCACTGGTAGGAA...CCGAGCCCTGCAGCCTCTCCATAAACGGAGTGATCTTCGGCTTGACATCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CAA 90 bp CTGTGGATGTCAAGCCGAAGATCACTCCGTTTATGGAGAGGCTGCAGGGCTCGGTGTCTTCAAATGGACTaGTCAGTAGACAATTCTCCA +
Preference number: 5 (lower is better)
Translates to: LWMSSRRSLRLWRGCRARCLQMD*SVDNSP
Trigger: TGGAGAATTGTCTACTGACAAGTCCATTTGAAGACA...CCGAGCCCTGCAGCCTCTCCATAAACGGAGTGATCTTCGGCTTGACATCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CAA 90 bp TGTACCCTGGTCAGGTCTGGGGCTCGATTCCATTTCACCGTCAGAAAGGTGAGAAACTGTACTTGCTTTTaGTCCTCTCGAGACAGATCG +
Preference number: 5 (lower is better)
Translates to: CTLVRSGARFHFTVRKVRNCTCF*SSRDRS
Trigger: CGATCTGTCTCGAGAGGACAAAAAGCAAGTACAGTT...TCTCACCTTTCTGACGGTGAAATGGAATCGAGCCCCAGACCTGACCAGGGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CAA 90 bp TTGTTGTTCAGCTTCCCGTTGCTATCACAGCCAATCTGGCCCAGCAGAGTGACATGGGTCAAGATGTGCTaGAGTATTCGGCTGAATCTG +
Preference number: 5 (lower is better)
Translates to: LLFSFPLLSQPIWPSRVTWVKMC*SIRLNL
Trigger: CAGATTCAGCCGAATACTCAAGCACATCTTGACCCA...TGTCACTCTGCTGGGCCAGATTGGCTGTGATAGCAACGGGAAGCTGAACAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS GCA 90 bp CTGACTCACCACCAAGGGAAACAAGGCCTTGAGTCTCTGCTTATGTaGAAGACTCTAATCCAAGTGGGAAGAAAATCACTCTCTGGCCAC +
Preference number: 5 (lower is better)
Translates to: LTHHQGKQGLESLLM*KTLIQVGRKSLSGH
Trigger: GTGGCCAGAGAGTGATTTTCTTCCCACTTGGATTAGAGTCTTGCACATAAGCAGAGACTCAAGGCCTTGTTTCCCTTGGTGGTGAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532469.1
CDS-3UTR CAA 90 bp GACAGCAATCAGGTCAAGCAGGGGGTCATACGTGATGCTGTCAGATGTGGTGTAGGACACAAACTGTACTaGCTTTTTGTCCTCTCGAGA +
Preference number: 5 (lower is better)
Translates to: DSNQVKQGVIRDAVRCGVGHKLY*LFVLSR
Trigger: TCTCGAGAGGACAAAAAGCAAGTACAGTTTGTGTCC...TACACCACATCTGACAGCATCACGTATGACCCCCTGCTTGACCTGATTGCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CAA 90 bp TGCGTAAACATAGAACGACTCATAGTCAATGGCCATGTCTTCTTGGGGCGGGTACACTTGGAGAGAAACTaGACGGTGAGAGTAGCTGAT +
Preference number: 5 (lower is better)
Translates to: CVNIERLIVNGHVFLGRVHLERN*TVRVAD
Trigger: ATCAGCTACTCTCACCGTCAAGTTTCTCTCCAAGTG...TACCCGCCCCAAGAAGACATGGCCATTGACTATGAGTCGTTCTATGTTTACGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CAA 90 bp TCGTTCTCTTGGGGAGGGAGGAGAGGACACTGTTTACTCAAGCATTTTACTGACCGGTTACTTCGTGAGTaGTATTTCTGGGAGGGAGTA +
Preference number: 5 (lower is better)
Translates to: SFSWGGRRGHCLLKHFTDRLLRE*YFWEGV
Trigger: TACTCCCTCCCAGAAATACAACTCACGAAGTAACCG...GTCAGTAAAATGCTTGAGTAAACAGTGTCCTCTCCTCCCTCCCCAAGAGAACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CAA 90 bp TGTACCCTGGTCAGGTCTGGGGCTCGATTCCATTTCACCGTCAGAAAGGTGAGATGTCTTCAAATGGACTaGTCAGTAGACAATTCTCCA +
Preference number: 5 (lower is better)
Translates to: CTLVRSGARFHFTVRKVRCLQMD*SVDNSP
Trigger: TGGAGAATTGTCTACTGACAAGTCCATTTGAAGACA...TCTCACCTTTCTGACGGTGAAATGGAATCGAGCCCCAGACCTGACCAGGGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CAA 90 bp GAAAATCACAAAGCCTTCTCGCCTTTTCTGAGTGGGCGGGATCCACAGCTGGCTGTTCGTAGACACTGCTaGAAAATGTCTTCAAATGGA +
Preference number: 5 (lower is better)
Translates to: ENHKAFSPFLSGRDPQLAVRRHC*KMSSNG
Trigger: TCCATTTGAAGACATTTTCAAGCAGTGTCTACGAAC...AGCCAGCTGTGGATCCCGCCCACTCAGAAAAGGCGAGAAGGCTTTGTGATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265465.8
CDS-3UTR CAA 90 bp CGTGATGCTGTCAGATGTGGTGTATGGTCCACAGGCAACCAGGACCATGCTTTGATTTTACTGACAGAGTaGTTTGTTTTCTGGTCCCAC +
Preference number: 5 (lower is better)
Translates to: RDAVRCGVWSTGNQDHALILLTE*FVFWSH
Trigger: GTGGGACCAGAAAACAAACAACTCTGTCAGTAAAAT...CAAAGCATGGTCCTGGTTGCCTGTGGACCATACACCACATCTGACAGCATCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS GCA 90 bp ACAATGTCTCTAGCTCCTGCATGGCCACTGTCCTTGCAGGTACTATaGCTGGCTTTCGATAATCTTTTGCTCAGAAACTCATGCTCAAAA +
Preference number: 5 (lower is better)
Translates to: TMSLAPAWPLSLQVL*LAFDNLLLRNSCSK
Trigger: TTTTGAGCATGAGTTTCTGAGCAAAAGATTATCGAAAGCCAGGCATAGTACCTGCAAGGACAGTGGCCATGCAGGAGCTAGAGACATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265465.8
ENST00000532391.1
ENST00000532469.1
CDS CCA 90 bp CAGGCTCCTACCAAAGGAAGGTCACAGCATAAGAATGACAGTCTTTaGAGCAGGAGCTCAAAATCTGAAGTCGATAGGGTGAATAGCAAA +
Preference number: 5 (lower is better)
Translates to: QAPTKGRSQHKNDSL*SRSSKSEVDRVNSK
Trigger: TTTGCTATTCACCCTATCGACTTCAGATTTTGAGCTCCTGCTCCAAAGACTGTCATTCTTATGCTGTGACCTTCCTTTGGTAGGAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527618.5
CDS-3UTR CAA 90 bp TTTCCTACCAGTGGTGTTGATTCCTTCCATAATTACAACCTGTCCAGGAAACAGGATGGGGGCTACGAGTaGACACACTCCTTTTTGTTA +
Preference number: 5 (lower is better)
Translates to: FPTSGVDSFHNYNLSRKQDGGYE*THSFLL
Trigger: TAACAAAAAGGAGTGTGTCAACTCGTAGCCCCCATC...CTGTTTCCTGGACAGGTTGTAATTATGGAAGGAATCAACACCACTGGTAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS-3UTR CAA 90 bp TTTCCTACCAGTGGTGTTGATTCCTTCCATAATTACAACCTGTCCAGGAAACAGTCGAGAATCACTGACTaGTTGTTCAGCTTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: FPTSGVDSFHNYNLSRKQSRITD*LFSFPL
Trigger: CAACGGGAAGCTGAACAACAAGTCAGTGATTCTCGA...CTGTTTCCTGGACAGGTTGTAATTATGGAAGGAATCAACACCACTGGTAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS TCA 90 bp AAGGCTATAAGCTCGCCTACCATTCCCTCCTCATTCTGTCCATACTaGACACAAAGCTCTACCACTGTAGAAAGGAAAATTGGACAAGTA +
Preference number: 5 (lower is better)
Translates to: KAISSPTIPSSFCPY*TQSSTTVERKIGQV
Trigger: TACTTGTCCAATTTTCCTTTCTACAGTGGTAGAGCTTTGTGTTCAGTATGGACAGAATGAGGAGGGAATGGTAGGCGAGCTTATAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532391.1
CDS CCA 90 bp GCTTATGTGCAAGACTCTAATCCAAGTGGGAAGAAAATCACTCTCTaGCCACAAAACCAGACAGCACTTACAAATCTTTCTTCAGAAGGG +
Preference number: 5 (lower is better)
Translates to: AYVQDSNPSGKKITL*PQNQTALTNLSSEG
Trigger: CCCTTCTGAAGAAAGATTTGTAAGTGCTGTCTGGTTTTGTGGCCAGAGAGTGATTTTCTTCCCACTTGGATTAGAGTCTTGCACATAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532469.1
CDS-3UTR CAA 90 bp CCGGAGCTTCTTGTGCCTTCAATAATTGTTCGTAGACACTGCTTGAAAATGTCTGTTCGTAGACACTGCTaGAAAATGTCTTCAAATGGA +
Preference number: 5 (lower is better)
Translates to: PELLVPSIIVRRHCLKMSVRRHC*KMSSNG
Trigger: TCCATTTGAAGACATTTTCAAGCAGTGTCTACGAAC...AGACATTTTCAAGCAGTGTCTACGAACAATTATTGAAGGCACAAGAAGCTCCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS CCA 72 bp GCAGCTCCTCCGCCAGCTGCTGGGCGGATGCGGACATaGTCGCCCAAGCCAGGGGCCGGGGAGCCGGCCCAC +
Preference number: 6 (lower is better)
Translates to: AAPPPAAGRMRT*SPKPGAGEPAH
Trigger: GTGGGCCGGCTCCCCGGCCCCTGGCTTGGGCGACCATGTCCGCATCCGCCCAGCAGCTGGCGGAGGAGCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265465.8
ENST00000527850.5
ENST00000532469.1
CDS CCA 72 bp CCCAGCTCCGACCTGCGCCCAAGAAGCCCACGGGGGTaGCGAGCGATGAGCTCCTCGCCCTCTTATCCTTCC +
Preference number: 6 (lower is better)
Translates to: PSSDLRPRSPRG*RAMSSSPSYPS
Trigger: GGAAGGATAAGAGGGCGAGGAGCTCATCGCTCGCCACCCCCGTGGGCTTCTTGGGCGCAGGTCGGAGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265465.8
ENST00000527850.5
ENST00000532469.1
CDS CCA 72 bp TCTAGGCCGAAGATCTGCAGCTCCTCCGCCAGCTGCTaGGCGGATGCGGACATGGTCGCCCAAGCCAGGGGC +
Preference number: 6 (lower is better)
Translates to: SRPKICSSSASC*ADADMVAQARG
Trigger: GCCCCTGGCTTGGGCGACCATGTCCGCATCCGCCCAGCAGCTGGCGGAGGAGCTGCAGATCTTCGGCCTAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265465.8
ENST00000527850.5
ENST00000532469.1
CDS GCA 72 bp CAGTCTAGGCCGAAGATCTGCAGCTCCTCCGCCAGCTaGTGGGCGGATGCGGACATGGTCGCCCAAGCCAGG +
Preference number: 6 (lower is better)
Translates to: QSRPKICSSSAS*WADADMVAQAR
Trigger: CCTGGCTTGGGCGACCATGTCCGCATCCGCCCAGCAGCTGGCGGAGGAGCTGCAGATCTTCGGCCTAGACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265465.8
ENST00000527850.5
ENST00000532469.1
CDS GCA 72 bp CAGATCCTGACGACCTGCACAGCAATGCATGGGCTCTaGCTCTCTGCCCCGTCCGCTGCCGGCCTCCTAAGG +
Preference number: 6 (lower is better)
Translates to: QILTTCTAMHGL*LSAPSAAGLLR
Trigger: CCTTAGGAGGCCGGCAGCGGACGGGGCAGAGAGGCAGAGCCCATGCATTGCTGTGCAGGTCGTCAGGATCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265465.8
ENST00000527618.5
ENST00000534785.1
CDS CCA 72 bp GAAGCCTCAGATCCTGACGACCTGCACAGCAATGCATaGGCTCTGCCTCTCTGCCCCGTCCGCTGCCGGCCT +
Preference number: 6 (lower is better)
Translates to: EASDPDDLHSNA*ALPLCPVRCRP
Trigger: AGGCCGGCAGCGGACGGGGCAGAGAGGCAGAGCCCATGCATTGCTGTGCAGGTCGTCAGGATCTGAGGCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265465.8
ENST00000527618.5
ENST00000534785.1
CDS GCA 72 bp TCAATTAGAGCCTCCTCGCAGTCTAGGCCGAAGATCTaGAGCTCCTCCGCCAGCTGCTGGGCGGATGCGGAC +
Preference number: 6 (lower is better)
Translates to: SIRASSQSRPKI*SSSASCWADAD
Trigger: GTCCGCATCCGCCCAGCAGCTGGCGGAGGAGCTGCAGATCTTCGGCCTAGACTGCGAGGAGGCTCTAATTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265465.8
ENST00000527850.5
ENST00000532469.1
CDS GCA 72 bp AACAGCAGAGGACAGAAGCCTCAGATCCTGACGACCTaGACAGCAATGCATGGGCTCTGCCTCTCTGCCCCG +
Preference number: 6 (lower is better)
Translates to: NSRGQKPQILTT*TAMHGLCLSAP
Trigger: CGGGGCAGAGAGGCAGAGCCCATGCATTGCTGTGCAGGTCGTCAGGATCTGAGGCTTCTGTCCTCTGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265465.8
ENST00000527618.5
ENST00000534785.1
CDS CAA 90 bp CCACCGTGCCCAGCTTGCAGTGGTCATTTTGTCAGCTCTGTCAGCTaGTCCTTCTTGGAGACTGTGCCAGGTACCAGGCCCCCACACAGT +
Preference number: 6 (lower is better)
Translates to: PPCPACSGHFVSSVS*SFLETVPGTRPPHS
Trigger: ACTGTGTGGGGGCCTGGTACCTGGCACAGTCTCCAAGAAGGACAAGCTGACAGAGCTGACAAAATGACCACTGCAAGCTGGGCACGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525924.1
CDS CAA 90 bp CCAGCTTGCAGTGGTCATTTTGTCAGCTCTGTCAGCTTGTCCTTCTaGGAGACTGTGCCAGGTACCAGGCCCCCACACAGTCAACAGGGC +
Preference number: 6 (lower is better)
Translates to: PACSGHFVSSVSLSF*ETVPGTRPPHSQQG
Trigger: GCCCTGTTGACTGTGTGGGGGCCTGGTACCTGGCACAGTCTCCAAGAAGGACAAGCTGACAGAGCTGACAAAATGACCACTGCAAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525924.1
CDS CCA 72 bp ACCGCTGAGCTTCTCAGTGACGGTGGCAGAACTGAGTaGCCGGAAAAACCCGCCAAATGGTTTGTGCAGTGC +
Preference number: 6 (lower is better)
Translates to: TAELLSDGGRTE*PEKPAKWFVQC
Trigger: GCACTGCACAAACCATTTGGCGGGTTTTTCCGGCCACTCAGTTCTGCCACCGTCACTGAGAAGCTCAGCGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS CAA 90 bp TCCCGGTCTCCCTCGAGAATCACTGACTTGTTGTTCAGCTTCCCGTaGCTATCACAGCCAATCTGGCCCAGCAGAGTGACAGGCTCCTAC +
Preference number: 6 (lower is better)
Translates to: SRSPSRITDLLFSFP*LSQPIWPSRVTGSY
Trigger: GTAGGAGCCTGTCACTCTGCTGGGCCAGATTGGCTGTGATAGCAACGGGAAGCTGAACAACAAGTCAGTGATTCTCGAGGGAGACCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527618.5
CDS CAA 72 bp CCAGCTTGCAGTGGTCATTTTGTCAGCTCTGTCAGCTaGTCCTTCTTGGAGACTGTGCCAGGTACCAGGCCC +
Preference number: 6 (lower is better)
Translates to: PACSGHFVSSVS*SFLETVPGTRP
Trigger: GGGCCTGGTACCTGGCACAGTCTCCAAGAAGGACAAGCTGACAGAGCTGACAAAATGACCACTGCAAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525924.1
CDS CAA 72 bp CTGAAAGGGCATCTTGTCCACCCATCCACCCAGCACTaGAGCCTTCCTAGGAGGCTGCCTAAGTGTGAGCAT +
Preference number: 6 (lower is better)
Translates to: LKGHLVHPSTQH*SLPRRLPKCEH
Trigger: ATGCTCACACTTAGGCAGCCTCCTAGGAAGGCTCAAGTGCTGGGTGGATGGGTGGACAAGATGCCCTTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527618.5
CDS TCA 72 bp ACCGCGTCATCACTGACTCTCAGGATGGAAGAACTCTaGAAGGGCATCTTGTCCACCCATCCACCCAGCACT +
Preference number: 6 (lower is better)
Translates to: TASSLTLRMEEL*KGILSTHPPST
Trigger: AGTGCTGGGTGGATGGGTGGACAAGATGCCCTTTCAGAGTTCTTCCATCCTGAGAGTCAGTGATGACGCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527618.5
CDS TCA 72 bp TCCCGTTGCTATCACAGCCAATCTGGCCCAGCAGAGTaGCAGGCTCCTACCAAAGGAAGGTCACAGCATAAG +
Preference number: 6 (lower is better)
Translates to: SRCYHSQSGPAE*QAPTKGRSQHK
Trigger: CTTATGCTGTGACCTTCCTTTGGTAGGAGCCTGTCACTCTGCTGGGCCAGATTGGCTGTGATAGCAACGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527618.5
CDS GCA 72 bp AAATCTCGAGAGGACGCTCTCCTGGTGAGAACGTCCTaGTTCCCAAAAGCTACCGCTGAGCTTCTCAGTGAC +
Preference number: 6 (lower is better)
Translates to: KSREDALLVRTS*FPKATAELLSD
Trigger: GTCACTGAGAAGCTCAGCGGTAGCTTTTGGGAAGCAGGACGTTCTCACCAGGAGAGCGTCCTCTCGAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265465.8
ENST00000527850.5
ENST00000532469.1
CDS CCA 72 bp AGAAAGGGCTGGGACCAGAAAGCCAGTCATCCTGCTTaGGGCCTGGAACACACTTCTTACCTACTGATCTCC +
Preference number: 6 (lower is better)
Translates to: RKGWDQKASHPA*GLEHTSYLLIS
Trigger: GGAGATCAGTAGGTAAGAAGTGTGTTCCAGGCCCCAAGCAGGATGACTGGCTTTCTGGTCCCAGCCCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533192.1
CDS CAA 72 bp AGTGGTCATTTTGTCAGCTCTGTCAGCTTGTCCTTCTaGGAGACTGTGCCAGGTACCAGGCCCCCACACAGT +
Preference number: 6 (lower is better)
Translates to: SGHFVSSVSLSF*ETVPGTRPPHS
Trigger: ACTGTGTGGGGGCCTGGTACCTGGCACAGTCTCCAAGAAGGACAAGCTGACAGAGCTGACAAAATGACCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525924.1
CDS CAA 72 bp CTCTGGTCAAGACCGTTAAGCAGCCCCTTGATTTTCTaGGCTGCAGAAAGGGCTGGGACCAGAAAGCCAGTC +
Preference number: 6 (lower is better)
Translates to: LWSRPLSSPLIF*AAERAGTRKPV
Trigger: GACTGGCTTTCTGGTCCCAGCCCTTTCTGCAGCCAAGAAAATCAAGGGGCTGCTTAACGGTCTTGACCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533192.1
CDS CAA 90 bp CTTGCTGCTTTCAGCTCTCTCTGGTCAAGACCGTTAAGCAGCCCCTaGATTTTCTTGGCTGCAGAAAGGGCTGGGACCAGAAAGCCAGTC +
Preference number: 6 (lower is better)
Translates to: LAAFSSLWSRPLSSP*IFLAAERAGTRKPV
Trigger: GACTGGCTTTCTGGTCCCAGCCCTTTCTGCAGCCAAGAAAATCAAGGGGCTGCTTAACGGTCTTGACCAGAGAGAGCTGAAAGCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533192.1
CDS TCA 72 bp ATGCTTCTATTTGTGGGAAATCCCCGGGGAGCTACCTaGCTCACCACCAAGGGAAACAAGGCCTTGAGTCTC +
Preference number: 6 (lower is better)
Translates to: MLLFVGNPRGAT*LTTKGNKALSL
Trigger: GAGACTCAAGGCCTTGTTTCCCTTGGTGGTGAGTCAGGTAGCTCCCCGGGGATTTCCCACAAATAGAAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532469.1
CDS CAA 72 bp TGGGGTGACAGGCAGCTCCTCTGGGTCAAGATGTGCTaGAGTATTCGGCTGAATCTGTCTGAAGTTCCGGAA +
Preference number: 6 (lower is better)
Translates to: WGDRQLLWVKMC*SIRLNLSEVPE
Trigger: TTCCGGAACTTCAGACAGATTCAGCCGAATACTCAAGCACATCTTGACCCAGAGGAGCTGCCTGTCACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534785.1
CDS CAA 72 bp TTCAGCTCTCTCTGGTCAAGACCGTTAAGCAGCCCCTaGATTTTCTTGGCTGCAGAAAGGGCTGGGACCAGA +
Preference number: 6 (lower is better)
Translates to: FSSLWSRPLSSP*IFLAAERAGTR
Trigger: TCTGGTCCCAGCCCTTTCTGCAGCCAAGAAAATCAAGGGGCTGCTTAACGGTCTTGACCAGAGAGAGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533192.1
CDS CAA 90 bp TTCAGCTCTCTCTGGTCAAGACCGTTAAGCAGCCCCTTGATTTTCTaGGCTGCAGAAAGGGCTGGGACCAGAAAGCCAGTCATCCTGCTT +
Preference number: 6 (lower is better)
Translates to: FSSLWSRPLSSPLIF*AAERAGTRKPVILL
Trigger: AAGCAGGATGACTGGCTTTCTGGTCCCAGCCCTTTCTGCAGCCAAGAAAATCAAGGGGCTGCTTAACGGTCTTGACCAGAGAGAGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533192.1
CDS TCA 72 bp GAGCTACCTGACTCACCACCAAGGGAAACAAGGCCTTaGGTCTCTGCTTATGTGCAAGACTCTAATCCAAGT +
Preference number: 6 (lower is better)
Translates to: ELPDSPPRETRP*VSAYVQDSNPS
Trigger: ACTTGGATTAGAGTCTTGCACATAAGCAGAGACTCAAGGCCTTGTTTCCCTTGGTGGTGAGTCAGGTAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532469.1
CDS GCA 72 bp CTAGCTCCTGCATGGCCACTGTCCTTGCAGGTACTATaGCTGGCTTTCGATAATCTTTTGCTCAGAAACTCA +
Preference number: 6 (lower is better)
Translates to: LAPAWPLSLQVL*LAFDNLLLRNS
Trigger: TGAGTTTCTGAGCAAAAGATTATCGAAAGCCAGGCATAGTACCTGCAAGGACAGTGGCCATGCAGGAGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265465.8
ENST00000532391.1
ENST00000532469.1
CDS CCA 72 bp CTCCTGCATGGCCACTGTCCTTGCAGGTACTATGCCTaGCTTTCGATAATCTTTTGCTCAGAAACTCATGCT +
Preference number: 6 (lower is better)
Translates to: LLHGHCPCRYYA*LSIIFCSETHA
Trigger: AGCATGAGTTTCTGAGCAAAAGATTATCGAAAGCCAGGCATAGTACCTGCAAGGACAGTGGCCATGCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265465.8
ENST00000532391.1
ENST00000532469.1
CDS GCA 72 bp AACTGCAAACAACAAATACATTTCTTGGCAGGGCATTaGTTTGACCCTGAGGTGACTACCGCGTCATCACTG +
Preference number: 6 (lower is better)
Translates to: NCKQQIHFLAGH*FDPEVTTASSL
Trigger: CAGTGATGACGCGGTAGTCACCTCAGGGTCAAAGCAATGCCCTGCCAAGAAATGTATTTGTTGTTTGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527618.5
CDS TCA 72 bp AGCTCGCCTACCATTCCCTCCTCATTCTGTCCATACTaGACACAAAGCTCTACCAATTTCTCAATTAGAGCC +
Preference number: 6 (lower is better)
Translates to: SSPTIPSSFCPY*TQSSTNFSIRA
Trigger: GGCTCTAATTGAGAAATTGGTAGAGCTTTGTGTTCAGTATGGACAGAATGAGGAGGGAATGGTAGGCGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265465.8
ENST00000532469.1
CDS TCA 72 bp GCTCAGAAACTCATGCTCAAAAGAGTTCAGGATCTCTaGGGTAAGGCCAACTTTATGTGTGCTGGTGCAGAA +
Preference number: 6 (lower is better)
Translates to: AQKLMLKRVQDL*GKANFMCAGAE
Trigger: TTCTGCACCAGCACACATAAAGTTGGCCTTACCTCAGAGATCCTGAACTCTTTTGAGCATGAGTTTCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265465.8
ENST00000532391.1
ENST00000532469.1
CDS GCA 72 bp CACCAAGGGAAACAAGGCCTTGAGTCTCTGCTTATGTaGAAGACTCTAATCCAAGTGGGAAGAAAATCACTC +
Preference number: 6 (lower is better)
Translates to: HQGKQGLESLLM*KTLIQVGRKSL
Trigger: GAGTGATTTTCTTCCCACTTGGATTAGAGTCTTGCACATAAGCAGAGACTCAAGGCCTTGTTTCCCTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532469.1
CDS CCA 72 bp CTCCTGCATGGCCACTGTCCTTGCAGGTACTATGCCTaGCTTTCGATAATCTTTTGCTCAGAAAATTTCTCA +
Preference number: 6 (lower is better)
Translates to: LLHGHCPCRYYA*LSIIFCSENFS
Trigger: TGAGAAATTTTCTGAGCAAAAGATTATCGAAAGCCAGGCATAGTACCTGCAAGGACAGTGGCCATGCAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527850.5
CDS CAA 90 bp GATAGGGTGAATAGCAAAACAAACTGCAAACAACAAATACATTTCTaGGCAGGGCATTGCTTTGACCCTGAGGTGACTACCGCGTCATCA +
Preference number: 6 (lower is better)
Translates to: DRVNSKTNCKQQIHF*AGHCFDPEVTTASS
Trigger: TGATGACGCGGTAGTCACCTCAGGGTCAAAGCAATGCCCTGCCAAGAAATGTATTTGTTGTTTGCAGTTTGTTTTGCTATTCACCCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527618.5
CDS CCA 72 bp CAAGACTCTAATCCAAGTGGGAAGAAAATCACTCTCTaGCCACAAAACCAGACAGCACTTACAAATCTTTCT +
Preference number: 6 (lower is better)
Translates to: QDSNPSGKKITL*PQNQTALTNLS
Trigger: AGAAAGATTTGTAAGTGCTGTCTGGTTTTGTGGCCAGAGAGTGATTTTCTTCCCACTTGGATTAGAGTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532469.1
CDS TCA 72 bp TTTGGAGCAGGAGCTCAAAATCTGAAGTCGATAGGGTaGATAGCAAAACAAACTGCAAACAACAAATACATT +
Preference number: 6 (lower is better)
Translates to: FGAGAQNLKSIG*IAKQTANNKYI
Trigger: AATGTATTTGTTGTTTGCAGTTTGTTTTGCTATTCACCCTATCGACTTCAGATTTTGAGCTCCTGCTCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527618.5