RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POGLUT3 (Homo sapiens)

Ensembl gene IDs: ENSG00000178202

Ensembl transcript IDs: ENST00000323468.10, ENST00000434945.6, ENST00000524787.1, ENST00000530318.1, ENST00000530529.5

Found 312 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCTTTTTCCTGTGGCACTGGCAGATGGCTGTGCTATCTTCTGGCTaGGGAACAAGTTCCATTCCATCACGTACTTCGGGTTTGCTGGAC +
Preference number: 1 (lower is better)
Translates to: GFFLWHWQMAVLSSG*GTSSIPSRTSGLLD
Trigger: GTCCAGCAAACCCGAAGTACGTGATGGAATGGAACTTGTTCCTCAGCCAGAAGATAGCACAGCCATCTGCCAGTGCCACAGGAAAAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530529.5
3UTR CCA 90 bp CTGGCTGAGGAACAAGTTCCATTCCATCACGTACTTCGGGTTTGCTaGACTGGCGCTCGGCATATTTCTGCAGTACTTGGTAATAGTAGC +
Preference number: 1 (lower is better)
Translates to: LAEEQVPFHHVLRVC*TGARHISAVLGNSS
Trigger: GCTACTATTACCAAGTACTGCAGAAATATGCCGAGCGCCAGTCCAGCAAACCCGAAGTACGTGATGGAATGGAACTTGTTCCTCAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530529.5
3UTR GCA 90 bp CTTCTGGCTGAGGAACAAGTTCCATTCCATCACGTACTTCGGGTTTaGTGGACTGGCGCTCGGCATATTTCTGCAGTACTTGGTAATAGT +
Preference number: 1 (lower is better)
Translates to: LLAEEQVPFHHVLRV*WTGARHISAVLGNS
Trigger: ACTATTACCAAGTACTGCAGAAATATGCCGAGCGCCAGTCCAGCAAACCCGAAGTACGTGATGGAATGGAACTTGTTCCTCAGCCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530529.5
3UTR GCA 90 bp GTTCTTCTCTTGAAGGCTTTTTCCTGTGGCACTGGCAGATGGCTGTaGTATCTTCTGGCTGAGGAACAAGTTCCATTCCATCACGTACTT +
Preference number: 1 (lower is better)
Translates to: VLLLKAFSCGTGRWL*YLLAEEQVPFHHVL
Trigger: AAGTACGTGATGGAATGGAACTTGTTCCTCAGCCAGAAGATAGCACAGCCATCTGCCAGTGCCACAGGAAAAAGCCTTCAAGAGAAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530529.5
3UTR CCA 90 bp CTCAAAGTTCTTCTCTTGAAGGCTTTTTCCTGTGGCACTGGCAGATaGCTGTGCTATCTTCTGGCTGAGGAACAAGTTCCATTCCATCAC +
Preference number: 1 (lower is better)
Translates to: LKVLLLKAFSCGTGR*LCYLLAEEQVPFHH
Trigger: GTGATGGAATGGAACTTGTTCCTCAGCCAGAAGATAGCACAGCCATCTGCCAGTGCCACAGGAAAAAGCCTTCAAGAGAAGAACTTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530529.5
3UTR CCA 90 bp TCCAAAGTCTTCATCGTAGCAACGACACCCACTGAAATAGAAAAGTaGTGGAGTGAGGAATGGATGCTTGCCTTTGTTCTTGGCCTATTA +
Preference number: 1 (lower is better)
Translates to: SKVFIVATTPTEIEK*WSEEWMLAFVLGLL
Trigger: TAATAGGCCAAGAACAAAGGCAAGCATCCATTCCTCACTCCACCACTTTTCTATTTCAGTGGGTGTCGTTGCTACGATGAAGACTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
3UTR GCA 90 bp CACCTGGAATTTGAGGCAGAAAGGTATGAGTTAGGCAACCTTTCTTaGCATAATCCCAGTTTTGACAAGCCTCAAACACAATGTACAATA +
Preference number: 1 (lower is better)
Translates to: HLEFEAERYELGNLS*HNPSFDKPQTQCTI
Trigger: TATTGTACATTGTGTTTGAGGCTTGTCAAAACTGGGATTATGGCAAGAAAGGTTGCCTAACTCATACCTTTCTGCCTCAAATTCCAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
3UTR GCA 90 bp CAATATTTAAGACACAAATTCATTAGGTATGGGCTCAGGACAGCTTaGTCTTATTTAATACTTGCGTGCTTGTGGTTTTGCACAATGGAT +
Preference number: 1 (lower is better)
Translates to: QYLRHKFIRYGLRTA*SYLILACLWFCTMD
Trigger: ATCCATTGTGCAAAACCACAAGCACGCAAGTATTAAATAAGAGCAAGCTGTCCTGAGCCCATACCTAATGAATTTGTGTCTTAAATATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
3UTR-3UTR TCA 90 bp CCTTGGACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTCTGGTCTCAAACTCCTaGCCTCAAAAGATCCGCCCA +
Preference number: 2 (lower is better)
Translates to: PWTDGYKEYVMSFQAMSPLVSNS*PQKIRP
Trigger: TGGGCGGATCTTTTGAGGTCAGGAGTTTGAGACCAG...AGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGTCCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
3UTR-3UTR GCA 90 bp TTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTCACGTACTTCGGGTTTaGTGGACTGGCGCTCGGCAT +
Preference number: 2 (lower is better)
Translates to: LVNPKIAGFLKIVVEVFSHVLRV*WTGARH
Trigger: ATGCCGAGCGCCAGTCCAGCAAACCCGAAGTACGTG...ACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530529.5
3UTR-3UTR GCA 90 bp AAGCCTGAAACACTCCTGGTCCTAAGCATTTCAGATGAGGGATACTCAACCAGTACTGGCAGATGGCTGTaGTATCTTCTGGCTGAGGAA +
Preference number: 2 (lower is better)
Translates to: KPETLLVLSISDEGYSTSTGRWL*YLLAEE
Trigger: TTCCTCAGCCAGAAGATAGCACAGCCATCTGCCAGT...ACTGGTTGAGTATCCCTCATCTGAAATGCTTAGGACCAGGAGTGTTTCAGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530529.5
3UTR-3UTR CCA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTATCGGGTTTGCTGGACTaGCGCTCGGCATATTTCTGC +
Preference number: 2 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVSGLLD*RSAYFC
Trigger: GCAGAAATATGCCGAGCGCCAGTCCAGCAAACCCGA...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530529.5
3UTR-3UTR TCA 90 bp TTTGAGGCAGAAAGGTATGAGTTAGGCAACCTTTCTTGCCATAATCCCAGTTTTCTGGTCTCAAACTCCTaGCCTCAAAAGATCCGCCCA +
Preference number: 2 (lower is better)
Translates to: FEAERYELGNLSCHNPSFLVSNS*PQKIRP
Trigger: TGGGCGGATCTTTTGAGGTCAGGAGTTTGAGACCAG...AAAACTGGGATTATGGCAAGAAAGGTTGCCTAACTCATACCTTTCTGCCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
3UTR-3UTR TCA 90 bp TTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTGGATACACAGGAGTGTaGTTCTGGGCTGACTCAAAG +
Preference number: 2 (lower is better)
Translates to: LVNPKIAGFLKIVVEVFSGYTGV*FWADSK
Trigger: CTTTGAGTCAGCCCAGAATCACACTCCTGTGTATCC...ACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530529.5
3UTR-3UTR CCA 90 bp AAAAATATTCCCTCCACAGTCTCCATGCCACCTTTAATAACAGAGTCATTCTCTGAAGGCTTTTTCCTGTaGCACTGGCAGATGGCTGTG +
Preference number: 2 (lower is better)
Translates to: KNIPSTVSMPPLITESFSEGFFL*HWQMAV
Trigger: CACAGCCATCTGCCAGTGCCACAGGAAAAAGCCTTC...AGAGAATGACTCTGTTATTAAAGGTGGCATGGAGACTGTGGAGGGAATATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000530529.5
3UTR-3UTR TCA 90 bp TTTGAGGCAGAAAGGTATGAGTTAGGCAACCTTTCTTGCCATAATCCCAGTTTTAGCAACGACACCCACTaGAATAGAAAAGTGGTGGAG +
Preference number: 2 (lower is better)
Translates to: FEAERYELGNLSCHNPSFSNDTH*NRKVVE
Trigger: CTCCACCACTTTTCTATTTCAGTGGGTGTCGTTGCT...AAAACTGGGATTATGGCAAGAAAGGTTGCCTAACTCATACCTTTCTGCCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
3UTR-3UTR CCA 90 bp AAGGAAATTTCCAAAGTCTTCATCGTAGCAACGACACCCACTGAAATAGAAAAGGCTGACACCACCACTTaGGTCGCTAAGATAGTGACA +
Preference number: 2 (lower is better)
Translates to: KEISKVFIVATTPTEIEKADTTT*VAKIVT
Trigger: TGTCACTATCTTAGCGACCCAAGTGGTGGTGTCAGC...CTTTTCTATTTCAGTGGGTGTCGTTGCTACGATGAAGACTTTGGAAATTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
3UTR-3UTR CCA 90 bp AAAAATATTCCCTCCACAGTCTCCATGCCACCTTTAATAACAGAGTCATTCTCTGCTGACACCACCACTTaGGTCGCTAAGATAGTGACA +
Preference number: 2 (lower is better)
Translates to: KNIPSTVSMPPLITESFSADTTT*VAKIVT
Trigger: TGTCACTATCTTAGCGACCCAAGTGGTGGTGTCAGC...AGAGAATGACTCTGTTATTAAAGGTGGCATGGAGACTGTGGAGGGAATATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
3UTR-3UTR CCA 90 bp TGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCAAATATTGTACTTCGGGTTTGCTaGACTGGCGCTCGGCATATT +
Preference number: 2 (lower is better)
Translates to: CLDLDLIPKIPHYVHANIVLRVC*TGARHI
Trigger: AATATGCCGAGCGCCAGTCCAGCAAACCCGAAGTAC...AATATTTGCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530529.5
3UTR-3UTR TCA 90 bp ACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTAAATCCATGAGTCCTAAATCCTaGCCCTGTCCTAAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: TDGYKEYVMSFQAMSPKSMSPKS*PCPKRE
Trigger: TTCTCTTTTAGGACAGGGTCAGGATTTAGGACTCAT...GGATTTAGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
3UTR-3UTR CCA 90 bp AATTTTGTGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCGGCTGTGCTATCTTCTaGCTGAGGAACAAGTTCCAT +
Preference number: 2 (lower is better)
Translates to: NFVFRLGSHPQDTSLCTCGCAIF*LRNKFH
Trigger: ATGGAACTTGTTCCTCAGCCAGAAGATAGCACAGCC...GCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACACAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530529.5
3UTR-3UTR TCA 90 bp TGTTCTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTAAATCCAAAACTTTTTaGGTGCTGACACCACCACTT +
Preference number: 2 (lower is better)
Translates to: CSWPIISESQDSRLPEDCKSKTF*VLTPPL
Trigger: AAGTGGTGGTGTCAGCACTCAAAAAGTTTTGGATTT...ACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
3UTR-3UTR TCA 90 bp TGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCAAATATTGTGCTATCTTCTGGCTaGGGAACAAGTTCCATTCCA +
Preference number: 2 (lower is better)
Translates to: CLDLDLIPKIPHYVHANIVLSSG*GTSSIP
Trigger: TGGAATGGAACTTGTTCCTCAGCCAGAAGATAGCAC...AATATTTGCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530529.5
3UTR-3UTR CCA 90 bp CTGGTTTGTCTCAACTTGCTTTTAACTATTAGGCCTGTTTGGCAGAGGCAATATGCTTGCCTTTGTTCTTaGCCTATTATTAGTGAATCC +
Preference number: 2 (lower is better)
Translates to: LVCLNLLLTIRPVWQRQYACLCS*PIISES
Trigger: GGATTCACTAATAATAGGCCAAGAACAAAGGCAAGC...ATATTGCCTCTGCCAAACAGGCCTAATAGTTAAAAGCAAGTTGAGACAAACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
3UTR-3UTR CCA 90 bp ACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTAAATCCACTGAAATAGAAAAGTaGTGGAGTGAGGAATGGATG +
Preference number: 2 (lower is better)
Translates to: TDGYKEYVMSFQAMSPKSTEIEK*WSEEWM
Trigger: CATCCATTCCTCACTCCACCACTTTTCTATTTCAGT...GGATTTAGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
3UTR-3UTR TCA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGACACCTTTGCTTTCTaGCAGTTCAATGTATACAAA +
Preference number: 2 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVDTFAF*QFNVYK
Trigger: TTTGTATACATTGAACTGTCAGAAAGCAAAGGTGTC...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
3UTR-3UTR TCA 90 bp TGTTCTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTGACACCTTTGCTTTCTaGCAGTTCAATGTATACAAA +
Preference number: 2 (lower is better)
Translates to: CSWPIISESQDSRLPEDCDTFAF*QFNVYK
Trigger: TTTGTATACATTGAACTGTCAGAAAGCAAAGGTGTC...ACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
3UTR-3UTR TCA 90 bp AAGGAAATTTCCAAAGTCTTCATCGTAGCAACGACACCCACTGAAATAGAAAAGTCTCTCTATCGGCTATaGTCCCCAAGTTTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: KEISKVFIVATTPTEIEKSLYRL*SPSFLF
Trigger: AAAAAGAAAACTTGGGGATCATAGCCGATAGAGAGA...CTTTTCTATTTCAGTGGGTGTCGTTGCTACGATGAAGACTTTGGAAATTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
3UTR TCA 72 bp CTGTGGCACTGGCAGATGGCTGTGCTATCTTCTGGCTaGGGAACAAGTTCCATTCCATCACGTACTTCGGGT +
Preference number: 3 (lower is better)
Translates to: LWHWQMAVLSSG*GTSSIPSRTSG
Trigger: ACCCGAAGTACGTGATGGAATGGAACTTGTTCCTCAGCCAGAAGATAGCACAGCCATCTGCCAGTGCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530529.5
3UTR GCA 72 bp GAGGAACAAGTTCCATTCCATCACGTACTTCGGGTTTaGTGGACTGGCGCTCGGCATATTTCTGCAGTACTT +
Preference number: 3 (lower is better)
Translates to: EEQVPFHHVLRV*WTGARHISAVL
Trigger: AAGTACTGCAGAAATATGCCGAGCGCCAGTCCAGCAAACCCGAAGTACGTGATGGAATGGAACTTGTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530529.5
3UTR CCA 72 bp GAACAAGTTCCATTCCATCACGTACTTCGGGTTTGCTaGACTGGCGCTCGGCATATTTCTGCAGTACTTGGT +
Preference number: 3 (lower is better)
Translates to: EQVPFHHVLRVC*TGARHISAVLG
Trigger: ACCAAGTACTGCAGAAATATGCCGAGCGCCAGTCCAGCAAACCCGAAGTACGTGATGGAATGGAACTTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530529.5
3UTR CCA 72 bp TTTCCTGTGGCACTGGCAGATGGCTGTGCTATCTTCTaGCTGAGGAACAAGTTCCATTCCATCACGTACTTC +
Preference number: 3 (lower is better)
Translates to: FPVALADGCAIF*LRNKFHSITYF
Trigger: GAAGTACGTGATGGAATGGAACTTGTTCCTCAGCCAGAAGATAGCACAGCCATCTGCCAGTGCCACAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530529.5
3UTR CCA 72 bp TTCATCGTAGCAACGACACCCACTGAAATAGAAAAGTaGTGGAGTGAGGAATGGATGCTTGCCTTTGTTCTT +
Preference number: 3 (lower is better)
Translates to: FIVATTPTEIEK*WSEEWMLAFVL
Trigger: AAGAACAAAGGCAAGCATCCATTCCTCACTCCACCACTTTTCTATTTCAGTGGGTGTCGTTGCTACGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
3UTR-3UTR CAA 90 bp TTTGAGGCAGAAAGGTATGAGTTAGGCAACCTTTCTTGCCATAATCCCAGTTTTGGAGAACTAGTCCACTaGGTGCAGTCTTCTATACTG +
Preference number: 3 (lower is better)
Translates to: FEAERYELGNLSCHNPSFGELVH*VQSSIL
Trigger: CAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCC...AAAACTGGGATTATGGCAAGAAAGGTTGCCTAACTCATACCTTTCTGCCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
3UTR-3UTR CAA 90 bp AATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTGTTTTCGGAGAACTAGTCCACTaGGTGCAGTCTTCTATACTG +
Preference number: 3 (lower is better)
Translates to: NPKIAGFLKIVVEVFSVFGELVH*VQSSIL
Trigger: CAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCC...GAAAACACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
3UTR-3UTR CAA 90 bp TTTGAGGCAGAAAGGTATGAGTTAGGCAACCTTTCTTGCCATAATCCCAGTTTTGTGAGGAATGGATGCTaGCCTTTGTTCTTGGCCTAT +
Preference number: 3 (lower is better)
Translates to: FEAERYELGNLSCHNPSFVRNGC*PLFLAY
Trigger: ATAGGCCAAGAACAAAGGCAAGCATCCATTCCTCAC...AAAACTGGGATTATGGCAAGAAAGGTTGCCTAACTCATACCTTTCTGCCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
3UTR-3UTR CAA 90 bp AAGCCTGAAACACTCCTGGTCCTAAGCATTTCAGATGAGGGATACTCAACCAGTTCAACTGTCCTTCTTTaGCAATCTTCTTGGCTTCTT +
Preference number: 3 (lower is better)
Translates to: KPETLLVLSISDEGYSTSSTVLL*QSSWLL
Trigger: AAGAAGCCAAGAAGATTGCAAAAGAAGGACAGTTGA...ACTGGTTGAGTATCCCTCATCTGAAATGCTTAGGACCAGGAGTGTTTCAGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530529.5
3UTR-3UTR CAA 90 bp AAGCCTGAAACACTCCTGGTCCTAAGCATTTCAGATGAGGGATACTCAACCAGTATTTTGTGTTTAGACTaGGATCTCATCCCCAAGATA +
Preference number: 3 (lower is better)
Translates to: KPETLLVLSISDEGYSTSILCLD*DLIPKI
Trigger: TATCTTGGGGATGAGATCCAAGTCTAAACACAAAAT...ACTGGTTGAGTATCCCTCATCTGAAATGCTTAGGACCAGGAGTGTTTCAGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
3UTR-3UTR CAA 90 bp CCTTGGACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTAAGATAGTGACACCTTaGCTTTCTGACAGTTCAATG +
Preference number: 3 (lower is better)
Translates to: PWTDGYKEYVMSFQAMSPKIVTP*LSDSSM
Trigger: CATTGAACTGTCAGAAAGCAAAGGTGTCACTATCTT...AGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGTCCAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
3UTR GCA 72 bp AGACACAAATTCATTAGGTATGGGCTCAGGACAGCTTaGTCTTATTTAATACTTGCGTGCTTGTGGTTTTGC +
Preference number: 3 (lower is better)
Translates to: RHKFIRYGLRTA*SYLILACLWFC
Trigger: GCAAAACCACAAGCACGCAAGTATTAAATAAGAGCAAGCTGTCCTGAGCCCATACCTAATGAATTTGTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
3UTR-3UTR CAA 90 bp CTGCTATATCCATCTACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGATTTTGTGTTTAGACTaGGATCTCATCCCCAAGATA +
Preference number: 3 (lower is better)
Translates to: LLYPSTYIKPPGELVHLVILCLD*DLIPKI
Trigger: TATCTTGGGGATGAGATCCAAGTCTAAACACAAAAT...CACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGTAGATGGATATAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
3UTR-3UTR CAA 90 bp CTGGTTTGTCTCAACTTGCTTTTAACTATTAGGCCTGTTTGGCAGAGGCAATATGTTTGCCTTGGATACTaGGCATTGATTAGACTGTTC +
Preference number: 3 (lower is better)
Translates to: LVCLNLLLTIRPVWQRQYVCLGY*ALIRLF
Trigger: GAACAGTCTAATCAATGCCAAGTATCCAAGGCAAAC...ATATTGCCTCTGCCAAACAGGCCTAATAGTTAAAAGCAAGTTGAGACAAACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
3UTR-3UTR CAA 90 bp CTGGTTTGTCTCAACTTGCTTTTAACTATTAGGCCTGTTTGGCAGAGGCAATATGCCATAATCCCAGTTTaGACAAGCCTCAAACACAAT +
Preference number: 3 (lower is better)
Translates to: LVCLNLLLTIRPVWQRQYAIIPV*TSLKHN
Trigger: ATTGTGTTTGAGGCTTGTCAAAACTGGGATTATGGC...ATATTGCCTCTGCCAAACAGGCCTAATAGTTAAAAGCAAGTTGAGACAAACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
3UTR-3UTR CAA 90 bp TTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTAATTTCTCCTTAATGTaGTCTCGGGCTTTGGCAAAA +
Preference number: 3 (lower is better)
Translates to: LVNPKIAGFLKIVVEVFSNFSLM*SRALAK
Trigger: TTTTGCCAAAGCCCGAGACAACATTAAGGAGAAATT...ACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
3UTR-3UTR CAA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAATTTTGTGTTTAGACTaGGATCTCATCCCCAAGATA +
Preference number: 3 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVILCLD*DLIPKI
Trigger: TATCTTGGGGATGAGATCCAAGTCTAAACACAAAAT...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
3UTR-3UTR CAA 90 bp AAGGAAATTTCCAAAGTCTTCATCGTAGCAACGACACCCACTGAAATAGAAAAGAAGATAGTGACACCTTaGCTTTCTGACAGTTCAATG +
Preference number: 3 (lower is better)
Translates to: KEISKVFIVATTPTEIEKKIVTP*LSDSSM
Trigger: CATTGAACTGTCAGAAAGCAAAGGTGTCACTATCTT...CTTTTCTATTTCAGTGGGTGTCGTTGCTACGATGAAGACTTTGGAAATTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
3UTR-3UTR CAA 90 bp TTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTATGTTGTCTCGGGCTTaGGCAAAATTTAGTTTAAAG +
Preference number: 3 (lower is better)
Translates to: LVNPKIAGFLKIVVEVFSMLSRA*AKFSLK
Trigger: CTTTAAACTAAATTTTGCCAAAGCCCGAGACAACAT...ACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
3UTR TCA 72 bp GGATGGGTATTAGAGTTTGCCTTGGATACTTGGCATTaGTTAGACTGTTCTGAAATTTGGTTATGCTTAGTC +
Preference number: 3 (lower is better)
Translates to: GWVLEFALDTWH*LDCSEIWLCLV
Trigger: GACTAAGCATAACCAAATTTCAGAACAGTCTAATCAATGCCAAGTATCCAAGGCAAACTCTAATACCCATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR GCA 90 bp CTGGCTGAGGAACAAGTTCCATTCCATCACGTACTTCGGGTTTGCTGGACTGGCCCGGGAGGCAGAGGTTaGAGTGAGTGGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: LAEEQVPFHHVLRVCWTGPGGRG*SEWRSC
Trigger: GCACGATCTCCACTCACTGCAACCTCTGCCTCCCGG...GCCAGTCCAGCAAACCCGAAGTACGTGATGGAATGGAACTTGTTCCTCAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530529.5
CDS-3UTR GCA 90 bp GAACAAGTTCCATTCCATCACGTACTTCGGGTTTGCTGGACTGGCGCTCGGCATACAGGCGTGAGCCACTaGAACCGGCCAGAGTACATA +
Preference number: 4 (lower is better)
Translates to: EQVPFHHVLRVCWTGARHTGVSH*NRPEYI
Trigger: TATGTACTCTGGCCGGTTGCAGTGGCTCACGCCTGT...ATGCCGAGCGCCAGTCCAGCAAACCCGAAGTACGTGATGGAATGGAACTTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530529.5
CDS-3UTR TCA 90 bp CCTTGGACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTCTGCGGGAGAGCGAGTaGGGTTCTGGCCCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: PWTDGYKEYVMSFQAMSPLRESE*GSGPPS
Trigger: ACTCGGAGGGCCAGAACCTCACTCGCTCTCCCGCAG...AGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGTCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323468.10
CDS-3UTR GCA 90 bp AAGCCTGAAACACTCCTGGTCCTAAGCATTTCAGATGAGGGATACTCAACCAGTCACGTACTTCGGGTTTaGTGGACTGGCGCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: KPETLLVLSISDEGYSTSHVLRV*WTGARH
Trigger: ATGCCGAGCGCCAGTCCAGCAAACCCGAAGTACGTG...ACTGGTTGAGTATCCCTCATCTGAAATGCTTAGGACCAGGAGTGTTTCAGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp CCTTGGACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTGTCTTCTGCCAGGCCTaGGGATCTTCCGGACACTCA +
Preference number: 4 (lower is better)
Translates to: PWTDGYKEYVMSFQAMSPVFCQA*GSSGHS
Trigger: TGAGTGTCCGGAAGATCCTCAGGCCTGGCAGAAGAC...AGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGTCCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR GCA 90 bp AGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCACGTACTTCGGGTTTaGTGGACTGGCGCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: RFNLSLKCSRDTQECDSGHVLRV*WTGARH
Trigger: ATGCCGAGCGCCAGTCCAGCAAACCCGAAGTACGTG...CCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR GCA 90 bp AGTAGGTCCCTAGCCATCAACTGTCCTTCTTTTGCAATCTTCTTGGCTTCTTCACTCGGCCTGCCAAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: SRSLAINCPSFAIFLASSLGLPK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTTGGCAGGCCGAG...TGAAGAAGCCAAGAAGATTGCAAAAGAAGGACAGTTGATGGCTAGGGACCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530529.5
CDS-3UTR CCA 90 bp CTGGTTTGTCTCAACTTGCTTTTAACTATTAGGCCTGTTTGGCAGAGGCAATATGAGCGAGTGAGGTTCTaGCCCTCCGAGTTGACCGCC +
Preference number: 4 (lower is better)
Translates to: LVCLNLLLTIRPVWQRQYERVRF*PSELTA
Trigger: GGCGGTCAACTCGGAGGGCCAGAACCTCACTCGCTC...ATATTGCCTCTGCCAAACAGGCCTAATAGTTAAAAGCAAGTTGAGACAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323468.10
CDS-3UTR CCA 90 bp GAACAAGTTCCATTCCATCACGTACTTCGGGTTTGCTGGACTGGCGCTCGGCATCTGTGGTTCCTTGGTTaGACAAGAAAGAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: EQVPFHHVLRVCWTGARHLWFLG*TRKSLL
Trigger: CAGAAGACTCTTTCTTGTCCAACCAAGGAACCACAG...ATGCCGAGCGCCAGTCCAGCAAACCCGAAGTACGTGATGGAATGGAACTTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530529.5
CDS-3UTR CCA 90 bp GAACAAGTTCCATTCCATCACGTACTTCGGGTTTGCTGGACTGGCGCTCGGCATTCGTGTAATGAACAATaGCACCTCTCTCATCCCCAA +
Preference number: 4 (lower is better)
Translates to: EQVPFHHVLRVCWTGARHSCNEQ*HLSHPQ
Trigger: TTGGGGATGAGAGAGGTGCCATTGTTCATTACACGA...ATGCCGAGCGCCAGTCCAGCAAACCCGAAGTACGTGATGGAATGGAACTTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530529.5
CDS-3UTR CCA 90 bp GGGCTCAGGACAGCTTGCTCTTATTTAATACTTGCGTGCTTGTGGTTTTGCACATCGGGTTTGCTGGACTaGCGCTCGGCATATTTCTGC +
Preference number: 4 (lower is better)
Translates to: GLRTACSYLILACLWFCTSGLLD*RSAYFC
Trigger: GCAGAAATATGCCGAGCGCCAGTCCAGCAAACCCGA...TGTGCAAAACCACAAGCACGCAAGTATTAAATAAGAGCAAGCTGTCCTGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR TCA 90 bp AAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGTCTTCTATACTGTCCTTCACGACTGTCGCCCAGCATaGGATATGGATATCTGTAAG +
Preference number: 4 (lower is better)
Translates to: KATGRTSPLGAVFYTVLHDCRPA*DMDICK
Trigger: CTTACAGATATCCATATCTCATGCTGGGCGACAGTC...GTGAAGGACAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCCCGGTGGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp ACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGTCTTCTATACTGTCGGGTTTGCTGGACTaGCGCTCGGCATATTTCTGC +
Preference number: 4 (lower is better)
Translates to: TYIKPPGELVHLVQSSILSGLLD*RSAYFC
Trigger: GCAGAAATATGCCGAGCGCCAGTCCAGCAAACCCGA...CAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp TTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCTGAGCCTCCCGAGTAGCTaGGATTACAGGCAAATGCCA +
Preference number: 4 (lower is better)
Translates to: FNLSLKCSRDTQECDSGLSLPSS*DYRQMP
Trigger: TGGCATTTGCCTGTAATCCCAGCTACTCGGGAGGCT...CAGCCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp TTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTGTCTTCTGCCAGGCCTaGGGATCTTCCGGACACTCA +
Preference number: 4 (lower is better)
Translates to: LVNPKIAGFLKIVVEVFSVFCQA*GSSGHS
Trigger: TGAGTGTCCGGAAGATCCTCAGGCCTGGCAGAAGAC...ACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp CTGGTTTGTCTCAACTTGCTTTTAACTATTAGGCCTGTTTGGCAGAGGCAATATGTCTTCTGCCAGGCCTaGGGATCTTCCGGACACTCA +
Preference number: 4 (lower is better)
Translates to: LVCLNLLLTIRPVWQRQYVFCQA*GSSGHS
Trigger: TGAGTGTCCGGAAGATCCTCAGGCCTGGCAGAAGAC...ATATTGCCTCTGCCAAACAGGCCTAATAGTTAAAAGCAAGTTGAGACAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR GCA 90 bp AATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTGTTTTCCACGTACTTCGGGTTTaGTGGACTGGCGCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: NPKIAGFLKIVVEVFSVFHVLRV*WTGARH
Trigger: ATGCCGAGCGCCAGTCCAGCAAACCCGAAGTACGTG...GAAAACACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR GCA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTCACGTACTTCGGGTTTaGTGGACTGGCGCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSHVLRV*WTGARH
Trigger: ATGCCGAGCGCCAGTCCAGCAAACCCGAAGTACGTG...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR GCA 90 bp TTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTCTCGGCCTGCCAAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: LVNPKIAGFLKIVVEVFSLGLPK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTTGGCAGGCCGAG...ACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGACAGCTGTACCAACTaGAGCCTCTCCTCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSDSCTN*SLSSRL
Trigger: CAGCCGAGAGGAGAGGCTCCAGTTGGTACAGCTGTC...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR CCA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGACAGCTGTACCAACTaGAGCCTCTCCTCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVDSCTN*SLSSRL
Trigger: CAGCCGAGAGGAGAGGCTCCAGTTGGTACAGCTGTC...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp AGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGGTACTTCGGGTTTGCTaGACTGGCGCTCGGCATATT +
Preference number: 4 (lower is better)
Translates to: RFNLSLKCSRDTQECDSGVLRVC*TGARHI
Trigger: AATATGCCGAGCGCCAGTCCAGCAAACCCGAAGTAC...CCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR CCA 90 bp CTGCTATATCCATCTACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGGAAGGCTTTTTCCTGTaGCACTGGCAGATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LLYPSTYIKPPGELVHLVEGFFL*HWQMAV
Trigger: CACAGCCATCTGCCAGTGCCACAGGAAAAAGCCTTC...CACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGTAGATGGATATAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp AGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGGAAGGCTTTTTCCTGTaGCACTGGCAGATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RFNLSLKCSRDTQECDSGEGFFL*HWQMAV
Trigger: CACAGCCATCTGCCAGTGCCACAGGAAAAAGCCTTC...CCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR CCA 90 bp GGGCTCAGGACAGCTTGCTCTTATTTAATACTTGCGTGCTTGTGGTTTTGCACAGCTGACACCACCACTTaGGTCGCTAAGATAGTGACA +
Preference number: 4 (lower is better)
Translates to: GLRTACSYLILACLWFCTADTTT*VAKIVT
Trigger: TGTCACTATCTTAGCGACCCAAGTGGTGGTGTCAGC...TGTGCAAAACCACAAGCACGCAAGTATTAAATAAGAGCAAGCTGTCCTGAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CCA 90 bp AAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGTCTTCTATACTGTCCTTCACATACTTGCGTGCTTGTaGTTTTGCACAATGGATGGG +
Preference number: 4 (lower is better)
Translates to: KATGRTSPLGAVFYTVLHILACL*FCTMDG
Trigger: CCCATCCATTGTGCAAAACCACAAGCACGCAAGTAT...GTGAAGGACAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCCCGGTGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR TCA 90 bp AAGGAAATTTCCAAAGTCTTCATCGTAGCAACGACACCCACTGAAATAGAAAAGTCTGGCCCTCCGAGTTaGCCGCCTGCAGGTAGAAAT +
Preference number: 4 (lower is better)
Translates to: KEISKVFIVATTPTEIEKSGPPS*PPAGRN
Trigger: ATTTCTACCTGCAGGCGGTCAACTCGGAGGGCCAGA...CTTTTCTATTTCAGTGGGTGTCGTTGCTACGATGAAGACTTTGGAAATTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323468.10
CDS-3UTR TCA 90 bp CTGCTATATCCATCTACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGAGAGCCACACCATaGAATGATAGGTATGGGGCT +
Preference number: 4 (lower is better)
Translates to: LLYPSTYIKPPGELVHLVQRATP*NDRYGA
Trigger: AGCCCCATACCTATCATTTCATGGTGTGGCTCTCTG...CACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGTAGATGGATATAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp AGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCAAGCATGGAGTGGGTaGTGTCATACGTTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RFNLSLKCSRDTQECDSGQAWSG*CHTLEG
Trigger: TCCTTCCAACGTATGACATCACCCACTCCATGCTTG...CCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp TTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCTGGTGCTATCTTCTGGCTaGGGAACAAGTTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: FNLSLKCSRDTQECDSGLVLSSG*GTSSIP
Trigger: TGGAATGGAACTTGTTCCTCAGCCAGAAGATAGCAC...CAGCCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR TCA 90 bp AGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGGGATACACAGGAGTGTaGTTCTGGGCTGACTCAAAG +
Preference number: 4 (lower is better)
Translates to: RFNLSLKCSRDTQECDSGGYTGV*FWADSK
Trigger: CTTTGAGTCAGCCCAGAATCACACTCCTGTGTATCC...CCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR TCA 90 bp CCTTGGACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTTCCTGTTCCACACACTaGATCTGCCTGGTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: PWTDGYKEYVMSFQAMSPSCSTH*ICLVCL
Trigger: GAGACAAACCAGGCAGATTCAGTGTGTGGAACAGGA...AGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGTCCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR TCA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAAGGCACGAAATTCCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVRHEIP*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGGAATTTCGTGCCT...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530529.5
CDS-3UTR GCA 90 bp AATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTGTTTTCACAGGCGTGAGCCACTaGAACCGGCCAGAGTACATA +
Preference number: 4 (lower is better)
Translates to: NPKIAGFLKIVVEVFSVFTGVSH*NRPEYI
Trigger: TATGTACTCTGGCCGGTTGCAGTGGCTCACGCCTGT...GAAAACACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR GCA 90 bp AAAAATATTCCCTCCACAGTCTCCATGCCACCTTTAATAACAGAGTCATTCTCTCTCGGCCTGCCAAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: KNIPSTVSMPPLITESFSLGLPK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTTGGCAGGCCGAG...AGAGAATGACTCTGTTATTAAAGGTGGCATGGAGACTGTGGAGGGAATATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTTCGGGTTTGCTGGACTaGCGCTCGGCATATTTCTGC +
Preference number: 4 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSSGLLD*RSAYFC
Trigger: GCAGAAATATGCCGAGCGCCAGTCCAGCAAACCCGA...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR CCA 90 bp ACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTAAATCCTCGGGTTTGCTGGACTaGCGCTCGGCATATTTCTGC +
Preference number: 4 (lower is better)
Translates to: TDGYKEYVMSFQAMSPKSSGLLD*RSAYFC
Trigger: GCAGAAATATGCCGAGCGCCAGTCCAGCAAACCCGA...GGATTTAGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp CCTTGGACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTGCTGACACCACCACTTaGGTCGCTAAGATAGTGACA +
Preference number: 4 (lower is better)
Translates to: PWTDGYKEYVMSFQAMSPADTTT*VAKIVT
Trigger: TGTCACTATCTTAGCGACCCAAGTGGTGGTGTCAGC...AGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGTCCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp TTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCTGCTCTCTCTGTTTTATTaGTCCAGGAAGGCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: FNLSLKCSRDTQECDSGLLSLFY*SRKALY
Trigger: ATACAGGGCCTTCCTGGATCAATAAAACAGAGAGAG...CAGCCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR TCA 90 bp CCTTGGACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTCCTGCATCTAGTAGCTaGGGATTTTCTTTGGACAGC +
Preference number: 4 (lower is better)
Translates to: PWTDGYKEYVMSFQAMSPPASSS*GFSLDS
Trigger: GCTGTCCAAAGAAAATCCTCAGCTACTAGATGCAGG...AGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGTCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp TTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCTGAGTGTGATTCTGGGCTaGCTCAAAGTTCTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: FNLSLKCSRDTQECDSGLSVILG*LKVLLL
Trigger: CAAGAGAAGAACTTTGAGTCAGCCCAGAATCACACT...CAGCCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR TCA 90 bp TTTTCCTGTGGCACTGGCAGATGGCTGTGCTATCTTCTGGCTGAGGAACAAGTTAAATCCAAAACTTTTTaGGTGCTGACACCACCACTT +
Preference number: 4 (lower is better)
Translates to: FSCGTGRWLCYLLAEEQVKSKTF*VLTPPL
Trigger: AAGTGGTGGTGTCAGCACTCAAAAAGTTTTGGATTT...AACTTGTTCCTCAGCCAGAAGATAGCACAGCCATCTGCCAGTGCCACAGGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530529.5
CDS-3UTR TCA 90 bp AGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGAGAAAAGTGGTGGAGTaGGGAATGGATGCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: RFNLSLKCSRDTQECDSGRKVVE*GMDACL
Trigger: AAGGCAAGCATCCATTCCTCACTCCACCACTTTTCT...CCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp CTGGTTTGTCTCAACTTGCTTTTAACTATTAGGCCTGTTTGGCAGAGGCAATATCTGGTCTCAAACTCCTaGCCTCAAAAGATCCGCCCA +
Preference number: 4 (lower is better)
Translates to: LVCLNLLLTIRPVWQRQYLVSNS*PQKIRP
Trigger: TGGGCGGATCTTTTGAGGTCAGGAGTTTGAGACCAG...ATATTGCCTCTGCCAAACAGGCCTAATAGTTAAAAGCAAGTTGAGACAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR TCA 90 bp CCTTGGACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTCCTTTGGAAGATCTTTaGGGCCAGGAACTGTCATGT +
Preference number: 4 (lower is better)
Translates to: PWTDGYKEYVMSFQAMSPPLEDL*GQELSC
Trigger: ACATGACAGTTCCTGGCCTCAAAGATCTTCCAAAGG...AGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGTCCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434945.6
CDS-3UTR TCA 90 bp GTCGCTAAGATAGTGACACCTTTGCTTTCTGACAGTTCAATGTATACAAACTTTAGGCAGAGGTTGCAGTaGGTGGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: VAKIVTPLLSDSSMYTNFRQRLQ*VEIVPL
Trigger: CAGTGGCACGATCTCCACTCACTGCAACCTCTGCCT...AAAGTTTGTATACATTGAACTGTCAGAAAGCAAAGGTGTCACTATCTTAGCGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530529.5
CDS-3UTR GCA 90 bp TTTGAGGCAGAAAGGTATGAGTTAGGCAACCTTTCTTGCCATAATCCCAGTTTTGAATGGTGTTTCACCTaGGGGAGAGCGAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: FEAERYELGNLSCHNPSFEWCFT*GRASEV
Trigger: AACCTCACTCGCTCTCCCGCAGGTGAAACACCATTC...AAAACTGGGATTATGGCAAGAAAGGTTGCCTAACTCATACCTTTCTGCCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323468.10
CDS-3UTR CCA 90 bp AAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGTCTTCTATACTGTCCTTCACATCTTTTGCAATCTGTaGTTCCTTGGTTGGACAAGA +
Preference number: 4 (lower is better)
Translates to: KATGRTSPLGAVFYTVLHIFCNL*FLGWTR
Trigger: TCTTGTCCAACCAAGGAACCACAGATTGCAAAAGAT...GTGAAGGACAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCCCGGTGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp GTCGCTAAGATAGTGACACCTTTGCTTTCTGACAGTTCAATGTATACAAACTTTGACAGCTGTACCAACTaGAGCCTCTCCTCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: VAKIVTPLLSDSSMYTNFDSCTN*SLSSRL
Trigger: CAGCCGAGAGGAGAGGCTCCAGTTGGTACAGCTGTC...AAAGTTTGTATACATTGAACTGTCAGAAAGCAAAGGTGTCACTATCTTAGCGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp AATTTTGTGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCGACAGCTGTACCAACTaGAGCCTCTCCTCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: NFVFRLGSHPQDTSLCTCDSCTN*SLSSRL
Trigger: CAGCCGAGAGGAGAGGCTCCAGTTGGTACAGCTGTC...GCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACACAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp TTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCTGGCTGAGGATTTTCTTTaGACAGCTGTACCAACTGGA +
Preference number: 4 (lower is better)
Translates to: FNLSLKCSRDTQECDSGLAEDFL*TAVPTG
Trigger: TCCAGTTGGTACAGCTGTCCAAAGAAAATCCTCAGC...CAGCCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR CCA 90 bp ACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGTCTTCTATACTGGCCCAGCATGAGATATaGATATCTGTAAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TYIKPPGELVHLVQSSILAQHEI*ISVSSH
Trigger: GTGGCTGCTTACAGATATCCATATCTCATGCTGGGC...CAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp CTGGCTGAGGAACAAGTTCCATTCCATCACGTACTTCGGGTTTGCTGGACTGGCCTTTTGCAATCTTCTTaGCTTCTTCATCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: LAEEQVPFHHVLRVCWTGLLQSS*LLHHFP
Trigger: AGGAAAATGATGAAGAAGCCAAGAAGATTGCAAAAG...GCCAGTCCAGCAAACCCGAAGTACGTGATGGAATGGAACTTGTTCCTCAGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530529.5
CDS-3UTR CCA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGTACTTCGGGTTTGCTaGACTGGCGCTCGGCATATT +
Preference number: 4 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSVLRVC*TGARHI
Trigger: AATATGCCGAGCGCCAGTCCAGCAAACCCGAAGTAC...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR CCA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGTACTTCGGGTTTGCTaGACTGGCGCTCGGCATATT +
Preference number: 4 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVVLRVC*TGARHI
Trigger: AATATGCCGAGCGCCAGTCCAGCAAACCCGAAGTAC...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp AGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGGGCTGTGCTATCTTCTaGCTGAGGAACAAGTTCCAT +
Preference number: 4 (lower is better)
Translates to: RFNLSLKCSRDTQECDSGGCAIF*LRNKFH
Trigger: ATGGAACTTGTTCCTCAGCCAGAAGATAGCACAGCC...CCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR CCA 90 bp CTGCTATATCCATCTACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGGGCTGTGCTATCTTCTaGCTGAGGAACAAGTTCCAT +
Preference number: 4 (lower is better)
Translates to: LLYPSTYIKPPGELVHLVGCAIF*LRNKFH
Trigger: ATGGAACTTGTTCCTCAGCCAGAAGATAGCACAGCC...CACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGTAGATGGATATAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp ACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGTCTTCTATACTGGGCTGTGCTATCTTCTaGCTGAGGAACAAGTTCCAT +
Preference number: 4 (lower is better)
Translates to: TYIKPPGELVHLVQSSILGCAIF*LRNKFH
Trigger: ATGGAACTTGTTCCTCAGCCAGAAGATAGCACAGCC...CAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp ACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTAAATCCTGTGGCACTGGCAGATaGCTGTGCTATCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: TDGYKEYVMSFQAMSPKSCGTGR*LCYLLA
Trigger: AGCCAGAAGATAGCACAGCCATCTGCCAGTGCCACA...GGATTTAGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTTGTGGCACTGGCAGATaGCTGTGCTATCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSCGTGR*LCYLLA
Trigger: AGCCAGAAGATAGCACAGCCATCTGCCAGTGCCACA...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR CCA 90 bp TGTTCTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTGGCACTGGCAGATaGCTGTGCTATCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: CSWPIISESQDSRLPEDCCGTGR*LCYLLA
Trigger: AGCCAGAAGATAGCACAGCCATCTGCCAGTGCCACA...ACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp TTTGAGGCAGAAAGGTATGAGTTAGGCAACCTTTCTTGCCATAATCCCAGTTTTGAAGGCTTTTTCCTGTaGCACTGGCAGATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: FEAERYELGNLSCHNPSFEGFFL*HWQMAV
Trigger: CACAGCCATCTGCCAGTGCCACAGGAAAAAGCCTTC...AAAACTGGGATTATGGCAAGAAAGGTTGCCTAACTCATACCTTTCTGCCTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CCA 90 bp TTTTCCTGTGGCACTGGCAGATGGCTGTGCTATCTTCTGGCTGAGGAACAAGTTACTGAAATAGAAAAGTaGTGGAGTGAGGAATGGATG +
Preference number: 4 (lower is better)
Translates to: FSCGTGRWLCYLLAEEQVTEIEK*WSEEWM
Trigger: CATCCATTCCTCACTCCACCACTTTTCTATTTCAGT...AACTTGTTCCTCAGCCAGAAGATAGCACAGCCATCTGCCAGTGCCACAGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530529.5
CDS-3UTR CCA 90 bp CTGGTTTGTCTCAACTTGCTTTTAACTATTAGGCCTGTTTGGCAGAGGCAATATAGCCTCCCGAGTAGCTaGGATTACAGGCAAATGCCA +
Preference number: 4 (lower is better)
Translates to: LVCLNLLLTIRPVWQRQYSLPSS*DYRQMP
Trigger: TGGCATTTGCCTGTAATCCCAGCTACTCGGGAGGCT...ATATTGCCTCTGCCAAACAGGCCTAATAGTTAAAAGCAAGTTGAGACAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CCA 90 bp TTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTAGCCTCCCGAGTAGCTaGGATTACAGGCAAATGCCA +
Preference number: 4 (lower is better)
Translates to: LVNPKIAGFLKIVVEVFSSLPSS*DYRQMP
Trigger: TGGCATTTGCCTGTAATCCCAGCTACTCGGGAGGCT...ACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp AAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGTCTTCTATACTGTCCTTCACTGTGGTTTTGCACAATaGATGGGTATTAGAGTTTGC +
Preference number: 4 (lower is better)
Translates to: KATGRTSPLGAVFYTVLHCGFAQ*MGIRVC
Trigger: GCAAACTCTAATACCCATCCATTGTGCAAAACCACA...GTGAAGGACAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCCCGGTGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR TCA 90 bp TTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCTGGACCAACTCTTTAGGTaGAAGAGATTTGACTACGAC +
Preference number: 4 (lower is better)
Translates to: FNLSLKCSRDTQECDSGLDQLFR*KRFDYD
Trigger: GTCGTAGTCAAATCTCTTTCACCTAAAGAGTTGGTC...CAGCCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp TTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTCAAGCATGGAGTGGGTaGTGTCATACGTTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LVNPKIAGFLKIVVEVFSQAWSG*CHTLEG
Trigger: TCCTTCCAACGTATGACATCACCCACTCCATGCTTG...ACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp AATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTGTTTTCCAAGCATGGAGTGGGTaGTGTCATACGTTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: NPKIAGFLKIVVEVFSVFQAWSG*CHTLEG
Trigger: TCCTTCCAACGTATGACATCACCCACTCCATGCTTG...GAAAACACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp AGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCTCTCTCTGTTTTATTaGTCCAGGAAGGCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: RFNLSLKCSRDTQECDSGLSLFY*SRKALY
Trigger: ATACAGGGCCTTCCTGGATCAATAAAACAGAGAGAG...CCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR TCA 90 bp ACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGTCTTCTATACTGCTCTCTCTGTTTTATTaGTCCAGGAAGGCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: TYIKPPGELVHLVQSSILLSLFY*SRKALY
Trigger: ATACAGGGCCTTCCTGGATCAATAAAACAGAGAGAG...CAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp CTGCTATATCCATCTACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGAGTGTGATTCTGGGCTaGCTCAAAGTTCTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LLYPSTYIKPPGELVHLVSVILG*LKVLLL
Trigger: CAAGAGAAGAACTTTGAGTCAGCCCAGAATCACACT...CACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGTAGATGGATATAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp TGTTCTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTGGATACACAGGAGTGTaGTTCTGGGCTGACTCAAAG +
Preference number: 4 (lower is better)
Translates to: CSWPIISESQDSRLPEDCGYTGV*FWADSK
Trigger: CTTTGAGTCAGCCCAGAATCACACTCCTGTGTATCC...ACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp ACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTAAATCCGGATACACAGGAGTGTaGTTCTGGGCTGACTCAAAG +
Preference number: 4 (lower is better)
Translates to: TDGYKEYVMSFQAMSPKSGYTGV*FWADSK
Trigger: CTTTGAGTCAGCCCAGAATCACACTCCTGTGTATCC...GGATTTAGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp AATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTGTTTTCGGATACACAGGAGTGTaGTTCTGGGCTGACTCAAAG +
Preference number: 4 (lower is better)
Translates to: NPKIAGFLKIVVEVFSVFGYTGV*FWADSK
Trigger: CTTTGAGTCAGCCCAGAATCACACTCCTGTGTATCC...GAAAACACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp AAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGTCTTCTATACTGTCCTTCACGACACCTTTGCTTTCTaGCAGTTCAATGTATACAAA +
Preference number: 4 (lower is better)
Translates to: KATGRTSPLGAVFYTVLHDTFAF*QFNVYK
Trigger: TTTGTATACATTGAACTGTCAGAAAGCAAAGGTGTC...GTGAAGGACAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCCCGGTGGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp TTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCTGATGAGTCCTAAATCCTaGCCCTGTCCTAAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: FNLSLKCSRDTQECDSGLMSPKS*PCPKRE
Trigger: TTCTCTTTTAGGACAGGGTCAGGATTTAGGACTCAT...CAGCCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp ACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTAAATCCTCCTGTTCCACACACTaGATCTGCCTGGTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: TDGYKEYVMSFQAMSPKSSCSTH*ICLVCL
Trigger: GAGACAAACCAGGCAGATTCAGTGTGTGGAACAGGA...GGATTTAGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR TCA 90 bp CCTTGGACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTTTTAAAGGCTGCGGCTaGATTGGCGAGATGAAGAAT +
Preference number: 4 (lower is better)
Translates to: PWTDGYKEYVMSFQAMSPFKGCG*IGEMKN
Trigger: ATTCTTCATCTCGCCAATTCAGCCGCAGCCTTTAAA...AGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGTCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR GCA 90 bp TGTTCTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTACTGGCAGATGGCTGTaGTATCTTCTGGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: CSWPIISESQDSRLPEDCTGRWL*YLLAEE
Trigger: TTCCTCAGCCAGAAGATAGCACAGCCATCTGCCAGT...ACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR GCA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTACTGGCAGATGGCTGTaGTATCTTCTGGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSTGRWL*YLLAEE
Trigger: TTCCTCAGCCAGAAGATAGCACAGCCATCTGCCAGT...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR GCA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAACTGGCAGATGGCTGTaGTATCTTCTGGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVTGRWL*YLLAEE
Trigger: TTCCTCAGCCAGAAGATAGCACAGCCATCTGCCAGT...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR GCA 90 bp AATTTTGTGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCACAGGCGTGAGCCACTaGAACCGGCCAGAGTACATA +
Preference number: 4 (lower is better)
Translates to: NFVFRLGSHPQDTSLCTCTGVSH*NRPEYI
Trigger: TATGTACTCTGGCCGGTTGCAGTGGCTCACGCCTGT...GCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACACAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR GCA 90 bp CCTTGGACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTGGGCTCAGGACAGCTTaGTCTTATTTAATACTTGCG +
Preference number: 4 (lower is better)
Translates to: PWTDGYKEYVMSFQAMSPGLRTA*SYLILA
Trigger: CGCAAGTATTAAATAAGAGCAAGCTGTCCTGAGCCC...AGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGTCCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CCA 90 bp CCTTGGACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTGCTGAGGATTTTCTTTaGACAGCTGTACCAACTGGA +
Preference number: 4 (lower is better)
Translates to: PWTDGYKEYVMSFQAMSPAEDFL*TAVPTG
Trigger: TCCAGTTGGTACAGCTGTCCAAAGAAAATCCTCAGC...AGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGTCCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp AAGGAAATTTCCAAAGTCTTCATCGTAGCAACGACACCCACTGAAATAGAAAAGTGTGGCACTGGCAGATaGCTGTGCTATCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: KEISKVFIVATTPTEIEKCGTGR*LCYLLA
Trigger: AGCCAGAAGATAGCACAGCCATCTGCCAGTGCCACA...CTTTTCTATTTCAGTGGGTGTCGTTGCTACGATGAAGACTTTGGAAATTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGCTGACACCACCACTTaGGTCGCTAAGATAGTGACA +
Preference number: 4 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSADTTT*VAKIVT
Trigger: TGTCACTATCTTAGCGACCCAAGTGGTGGTGTCAGC...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp TTTGAGGCAGAAAGGTATGAGTTAGGCAACCTTTCTTGCCATAATCCCAGTTTTGCATTTGCTGGAGATTaGTGCTGGGAAAGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: FEAERYELGNLSCHNPSFAFAGD*CWERKQ
Trigger: TTGCTTCCTTTCCCAGCATCAATCTCCAGCAAATGC...AAAACTGGGATTATGGCAAGAAAGGTTGCCTAACTCATACCTTTCTGCCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR TCA 90 bp AATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTGTTTTCGCATTTGCTGGAGATTaGTGCTGGGAAAGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: NPKIAGFLKIVVEVFSVFAFAGD*CWERKQ
Trigger: TTGCTTCCTTTCCCAGCATCAATCTCCAGCAAATGC...GAAAACACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp AAAAATATTCCCTCCACAGTCTCCATGCCACCTTTAATAACAGAGTCATTCTCTCAGAGAGCCACACCATaGAATGATAGGTATGGGGCT +
Preference number: 4 (lower is better)
Translates to: KNIPSTVSMPPLITESFSQRATP*NDRYGA
Trigger: AGCCCCATACCTATCATTTCATGGTGTGGCTCTCTG...AGAGAATGACTCTGTTATTAAAGGTGGCATGGAGACTGTGGAGGGAATATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp AAGGAAATTTCCAAAGTCTTCATCGTAGCAACGACACCCACTGAAATAGAAAAGCAGAGAGCCACACCATaGAATGATAGGTATGGGGCT +
Preference number: 4 (lower is better)
Translates to: KEISKVFIVATTPTEIEKQRATP*NDRYGA
Trigger: AGCCCCATACCTATCATTTCATGGTGTGGCTCTCTG...CTTTTCTATTTCAGTGGGTGTCGTTGCTACGATGAAGACTTTGGAAATTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAAAGGACAACATCTCTTaGATCCAGAGAGCCACACCA +
Preference number: 4 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVKDNIS*IQRATP
Trigger: TGGTGTGGCTCTCTGGATTCAAGAGATGTTGTCCTT...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTAAGGACAACATCTCTTaGATCCAGAGAGCCACACCA +
Preference number: 4 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSKDNIS*IQRATP
Trigger: TGGTGTGGCTCTCTGGATTCAAGAGATGTTGTCCTT...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTCCTGCATCTAGTAGCTaGGGATTTTCTTTGGACAGC +
Preference number: 4 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSPASSS*GFSLDS
Trigger: GCTGTCCAAAGAAAATCCTCAGCTACTAGATGCAGG...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR TCA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGACTGTCGCCCAGCATaGGATATGGATATCTGTAAG +
Preference number: 4 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVDCRPA*DMDICK
Trigger: CTTACAGATATCCATATCTCATGCTGGGCGACAGTC...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGTGCTATCTTCTGGCTaGGGAACAAGTTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSVLSSG*GTSSIP
Trigger: TGGAATGGAACTTGTTCCTCAGCCAGAAGATAGCAC...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR TCA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAAGAAAAGTGGTGGAGTaGGGAATGGATGCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVRKVVE*GMDACL
Trigger: AAGGCAAGCATCCATTCCTCACTCCACCACTTTTCT...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp TGTTCTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTAGCAACGACACCCACTaGAATAGAAAAGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: CSWPIISESQDSRLPEDCSNDTH*NRKVVE
Trigger: CTCCACCACTTTTCTATTTCAGTGGGTGTCGTTGCT...ACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp ACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTAAATCCAGCAACGACACCCACTaGAATAGAAAAGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: TDGYKEYVMSFQAMSPKSSNDTH*NRKVVE
Trigger: CTCCACCACTTTTCTATTTCAGTGGGTGTCGTTGCT...GGATTTAGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp GTCGCTAAGATAGTGACACCTTTGCTTTCTGACAGTTCAATGTATACAAACTTTCTGGTCTCAAACTCCTaGCCTCAAAAGATCCGCCCA +
Preference number: 4 (lower is better)
Translates to: VAKIVTPLLSDSSMYTNFLVSNS*PQKIRP
Trigger: TGGGCGGATCTTTTGAGGTCAGGAGTTTGAGACCAG...AAAGTTTGTATACATTGAACTGTCAGAAAGCAAAGGTGTCACTATCTTAGCGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR GCA 90 bp AAGGAAATTTCCAAAGTCTTCATCGTAGCAACGACACCCACTGAAATAGAAAAGACTGGCAGATGGCTGTaGTATCTTCTGGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: KEISKVFIVATTPTEIEKTGRWL*YLLAEE
Trigger: TTCCTCAGCCAGAAGATAGCACAGCCATCTGCCAGT...CTTTTCTATTTCAGTGGGTGTCGTTGCTACGATGAAGACTTTGGAAATTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR GCA 90 bp AAGCCTGAAACACTCCTGGTCCTAAGCATTTCAGATGAGGGATACTCAACCAGTATGGGTATTAGAGTTTaGCTTGGATACTTGGCATTG +
Preference number: 4 (lower is better)
Translates to: KPETLLVLSISDEGYSTSMGIRV*LGYLAL
Trigger: CAATGCCAAGTATCCAAGGCAAACTCTAATACCCAT...ACTGGTTGAGTATCCCTCATCTGAAATGCTTAGGACCAGGAGTGTTTCAGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CCA 90 bp TTTGAGGCAGAAAGGTATGAGTTAGGCAACCTTTCTTGCCATAATCCCAGTTTTGACTACGACTTTGAATaGTGTTTCACCTGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: FEAERYELGNLSCHNPSFDYDFE*CFTCGR
Trigger: TCTCCCGCAGGTGAAACACCATTCAAAGTCGTAGTC...AAAACTGGGATTATGGCAAGAAAGGTTGCCTAACTCATACCTTTCTGCCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323468.10
CDS-3UTR CCA 90 bp CTGCTATATCCATCTACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGCACTCACAGTACTCATaGTACACTGGTCCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LLYPSTYIKPPGELVHLVHSQYS*YTGPFK
Trigger: TTTGAAAGGACCAGTGTACCATGAGTACTGTGAGTG...CACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGTAGATGGATATAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp ACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGTCTTCTATACTGCAATCTGTGGTTCCTTaGTTGGACAAGAAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: TYIKPPGELVHLVQSSILQSVVP*LDKKES
Trigger: AGACTCTTTCTTGTCCAACCAAGGAACCACAGATTG...CAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp TGTTCTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTGCTTCAAGCATGGAGTaGGTGATGTCATACGTTGGA +
Preference number: 4 (lower is better)
Translates to: CSWPIISESQDSRLPEDCASSME*VMSYVG
Trigger: TCCAACGTATGACATCACCCACTCCATGCTTGAAGC...ACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp ACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTAAATCCGCTTCAAGCATGGAGTaGGTGATGTCATACGTTGGA +
Preference number: 4 (lower is better)
Translates to: TDGYKEYVMSFQAMSPKSASSME*VMSYVG
Trigger: TCCAACGTATGACATCACCCACTCCATGCTTGAAGC...GGATTTAGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp AATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTGTTTTCGCTTCAAGCATGGAGTaGGTGATGTCATACGTTGGA +
Preference number: 4 (lower is better)
Translates to: NPKIAGFLKIVVEVFSVFASSME*VMSYVG
Trigger: TCCAACGTATGACATCACCCACTCCATGCTTGAAGC...GAAAACACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp AATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTGTTTTCGCCCAGCATGAGATATaGATATCTGTAAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: NPKIAGFLKIVVEVFSVFAQHEI*ISVSSH
Trigger: GTGGCTGCTTACAGATATCCATATCTCATGCTGGGC...GAAAACACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp AAGCCTGAAACACTCCTGGTCCTAAGCATTTCAGATGAGGGATACTCAACCAGTGCTTGCCTTTGTTCTTaGCCTATTATTAGTGAATCC +
Preference number: 4 (lower is better)
Translates to: KPETLLVLSISDEGYSTSACLCS*PIISES
Trigger: GGATTCACTAATAATAGGCCAAGAACAAAGGCAAGC...ACTGGTTGAGTATCCCTCATCTGAAATGCTTAGGACCAGGAGTGTTTCAGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp TTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCTGACTGAAATAGAAAAGTaGTGGAGTGAGGAATGGATG +
Preference number: 4 (lower is better)
Translates to: FNLSLKCSRDTQECDSGLTEIEK*WSEEWM
Trigger: CATCCATTCCTCACTCCACCACTTTTCTATTTCAGT...CAGCCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp CCTTGGACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTTTAGCCTTTAGCACCTaGAATTTGAGGCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: PWTDGYKEYVMSFQAMSPLAFST*NLRQKG
Trigger: ACCTTTCTGCCTCAAATTCCAGGTGCTAAAGGCTAA...AGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGTCCAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR TCA 90 bp AAAAATATTCCCTCCACAGTCTCCATGCCACCTTTAATAACAGAGTCATTCTCTAAGGACAACATCTCTTaGATCCAGAGAGCCACACCA +
Preference number: 4 (lower is better)
Translates to: KNIPSTVSMPPLITESFSKDNIS*IQRATP
Trigger: TGGTGTGGCTCTCTGGATTCAAGAGATGTTGTCCTT...AGAGAATGACTCTGTTATTAAAGGTGGCATGGAGACTGTGGAGGGAATATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp AAGGAAATTTCCAAAGTCTTCATCGTAGCAACGACACCCACTGAAATAGAAAAGGTGCTATCTTCTGGCTaGGGAACAAGTTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: KEISKVFIVATTPTEIEKVLSSG*GTSSIP
Trigger: TGGAATGGAACTTGTTCCTCAGCCAGAAGATAGCAC...CTTTTCTATTTCAGTGGGTGTCGTTGCTACGATGAAGACTTTGGAAATTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTAGTGTGATTCTGGGCTaGCTCAAAGTTCTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSSVILG*LKVLLL
Trigger: CAAGAGAAGAACTTTGAGTCAGCCCAGAATCACACT...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR TCA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAAGTGTGATTCTGGGCTaGCTCAAAGTTCTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVSVILG*LKVLLL
Trigger: CAAGAGAAGAACTTTGAGTCAGCCCAGAATCACACT...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp CCTTGGACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTTCTCTCTATCGGCTATaGTCCCCAAGTTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: PWTDGYKEYVMSFQAMSPSLYRL*SPSFLF
Trigger: AAAAAGAAAACTTGGGGATCATAGCCGATAGAGAGA...AGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGTCCAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTATTTAAAGGCTGCGGCTaGATTGGCGAGATGAAGAAT +
Preference number: 4 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVFKGCG*IGEMKN
Trigger: ATTCTTCATCTCGCCAATTCAGCCGCAGCCTTTAAA...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR GCA 90 bp AGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGATGGGTATTAGAGTTTaGCTTGGATACTTGGCATTG +
Preference number: 4 (lower is better)
Translates to: RFNLSLKCSRDTQECDSGMGIRV*LGYLAL
Trigger: CAATGCCAAGTATCCAAGGCAAACTCTAATACCCAT...CCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR GCA 90 bp TTTGAGGCAGAAAGGTATGAGTTAGGCAACCTTTCTTGCCATAATCCCAGTTTTGGGCTCAGGACAGCTTaGTCTTATTTAATACTTGCG +
Preference number: 4 (lower is better)
Translates to: FEAERYELGNLSCHNPSFGLRTA*SYLILA
Trigger: CGCAAGTATTAAATAAGAGCAAGCTGTCCTGAGCCC...AAAACTGGGATTATGGCAAGAAAGGTTGCCTAACTCATACCTTTCTGCCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CCA 90 bp CTGCTATATCCATCTACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGGTACTCATGGTACACTaGTCCTTTCAAAATATAGGG +
Preference number: 4 (lower is better)
Translates to: LLYPSTYIKPPGELVHLVVLMVH*SFQNIG
Trigger: CCCTATATTTTGAAAGGACCAGTGTACCATGAGTAC...CACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGTAGATGGATATAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp ACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGTCTTCTATACTGGTACTCATGGTACACTaGTCCTTTCAAAATATAGGG +
Preference number: 4 (lower is better)
Translates to: TYIKPPGELVHLVQSSILVLMVH*SFQNIG
Trigger: CCCTATATTTTGAAAGGACCAGTGTACCATGAGTAC...CAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp CTGGTTTGTCTCAACTTGCTTTTAACTATTAGGCCTGTTTGGCAGAGGCAATATCTGTGGTTCCTTGGTTaGACAAGAAAGAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LVCLNLLLTIRPVWQRQYLWFLG*TRKSLL
Trigger: CAGAAGACTCTTTCTTGTCCAACCAAGGAACCACAG...ATATTGCCTCTGCCAAACAGGCCTAATAGTTAAAAGCAAGTTGAGACAAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CCA 90 bp CTGGTTTGTCTCAACTTGCTTTTAACTATTAGGCCTGTTTGGCAGAGGCAATATTCGTGTAATGAACAATaGCACCTCTCTCATCCCCAA +
Preference number: 4 (lower is better)
Translates to: LVCLNLLLTIRPVWQRQYSCNEQ*HLSHPQ
Trigger: TTGGGGATGAGAGAGGTGCCATTGTTCATTACACGA...ATATTGCCTCTGCCAAACAGGCCTAATAGTTAAAAGCAAGTTGAGACAAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CCA 90 bp TTTGAGGCAGAAAGGTATGAGTTAGGCAACCTTTCTTGCCATAATCCCAGTTTTTCGTGTAATGAACAATaGCACCTCTCTCATCCCCAA +
Preference number: 4 (lower is better)
Translates to: FEAERYELGNLSCHNPSFSCNEQ*HLSHPQ
Trigger: TTGGGGATGAGAGAGGTGCCATTGTTCATTACACGA...AAAACTGGGATTATGGCAAGAAAGGTTGCCTAACTCATACCTTTCTGCCTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CCA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGCTGAGGATTTTCTTTaGACAGCTGTACCAACTGGA +
Preference number: 4 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSAEDFL*TAVPTG
Trigger: TCCAGTTGGTACAGCTGTCCAAAGAAAATCCTCAGC...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR CCA 90 bp TGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCAAATATTGAAGGCTTTTTCCTGTaGCACTGGCAGATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: CLDLDLIPKIPHYVHANIEGFFL*HWQMAV
Trigger: CACAGCCATCTGCCAGTGCCACAGGAAAAAGCCTTC...AATATTTGCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp AGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGGTTTTGCACAATGGATaGGTATTAGAGTTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: RFNLSLKCSRDTQECDSGVLHNG*VLEFAL
Trigger: CAAGGCAAACTCTAATACCCATCCATTGTGCAAAAC...CCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CCA 90 bp TTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTAGGCTGCGGCTGAATTaGCGAGATGAAGAATTATGT +
Preference number: 4 (lower is better)
Translates to: LVNPKIAGFLKIVVEVFSRLRLN*RDEELC
Trigger: ACATAATTCTTCATCTCGCCAATTCAGCCGCAGCCT...ACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
3UTR CAA 72 bp GTAAGAATTCCCTTCACTCCATCTTCTCCTCAGATATaGGTGAATCTCCTCCCAAACTTTCAACCACATAGA +
Preference number: 4 (lower is better)
Translates to: VRIPFTPSSPQI*VNLLPNFQPHR
Trigger: TCTATGTGGTTGAAAGTTTGGGAGGAGATTCACCAATATCTGAGGAGAAGATGGAGTGAAGGGAATTCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR TCA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGACCAACTCTTTAGGTaGAAGAGATTTGACTACGAC +
Preference number: 4 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSDQLFR*KRFDYD
Trigger: GTCGTAGTCAAATCTCTTTCACCTAAAGAGTTGGTC...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp GTCGCTAAGATAGTGACACCTTTGCTTTCTGACAGTTCAATGTATACAAACTTTGCATTTGCTGGAGATTaGTGCTGGGAAAGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: VAKIVTPLLSDSSMYTNFAFAGD*CWERKQ
Trigger: TTGCTTCCTTTCCCAGCATCAATCTCCAGCAAATGC...AAAGTTTGTATACATTGAACTGTCAGAAAGCAAAGGTGTCACTATCTTAGCGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp GTCGCTAAGATAGTGACACCTTTGCTTTCTGACAGTTCAATGTATACAAACTTTCCTGCATCTAGTAGCTaGGGATTTTCTTTGGACAGC +
Preference number: 4 (lower is better)
Translates to: VAKIVTPLLSDSSMYTNFPASSS*GFSLDS
Trigger: GCTGTCCAAAGAAAATCCTCAGCTACTAGATGCAGG...AAAGTTTGTATACATTGAACTGTCAGAAAGCAAAGGTGTCACTATCTTAGCGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp AATTTTGTGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCGTGCTATCTTCTGGCTaGGGAACAAGTTCCATTCCA +
Preference number: 4 (lower is better)
Translates to: NFVFRLGSHPQDTSLCTCVLSSG*GTSSIP
Trigger: TGGAATGGAACTTGTTCCTCAGCCAGAAGATAGCAC...GCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACACAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp TGTTCTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTCACTCACAGTACTCATaGTACACTGGTCCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: CSWPIISESQDSRLPEDCHSQYS*YTGPFK
Trigger: TTTGAAAGGACCAGTGTACCATGAGTACTGTGAGTG...ACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTACACTCACAGTACTCATaGTACACTGGTCCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVHSQYS*YTGPFK
Trigger: TTTGAAAGGACCAGTGTACCATGAGTACTGTGAGTG...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp AAAAATATTCCCTCCACAGTCTCCATGCCACCTTTAATAACAGAGTCATTCTCTCTGTGGTTCCTTGGTTaGACAAGAAAGAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: KNIPSTVSMPPLITESFSLWFLG*TRKSLL
Trigger: CAGAAGACTCTTTCTTGTCCAACCAAGGAACCACAG...AGAGAATGACTCTGTTATTAAAGGTGGCATGGAGACTGTGGAGGGAATATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp ACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTAAATCCCAATCTGTGGTTCCTTaGTTGGACAAGAAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: TDGYKEYVMSFQAMSPKSQSVVP*LDKKES
Trigger: AGACTCTTTCTTGTCCAACCAAGGAACCACAGATTG...GGATTTAGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTACAATCTGTGGTTCCTTaGTTGGACAAGAAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVQSVVP*LDKKES
Trigger: AGACTCTTTCTTGTCCAACCAAGGAACCACAGATTG...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp AATTTTGTGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCGCCCAGCATGAGATATaGATATCTGTAAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: NFVFRLGSHPQDTSLCTCAQHEI*ISVSSH
Trigger: GTGGCTGCTTACAGATATCCATATCTCATGCTGGGC...GCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACACAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp TTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCTGCTTTTGCAATCTTCTTaGCTTCTTCATCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: FNLSLKCSRDTQECDSGLLLQSS*LLHHFP
Trigger: AGGAAAATGATGAAGAAGCCAAGAAGATTGCAAAAG...CAGCCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR CCA 90 bp AAGCCTGAAACACTCCTGGTCCTAAGCATTTCAGATGAGGGATACTCAACCAGTCTTTTGCAATCTTCTTaGCTTCTTCATCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: KPETLLVLSISDEGYSTSLLQSS*LLHHFP
Trigger: AGGAAAATGATGAAGAAGCCAAGAAGATTGCAAAAG...ACTGGTTGAGTATCCCTCATCTGAAATGCTTAGGACCAGGAGTGTTTCAGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp CTGGTTTGTCTCAACTTGCTTTTAACTATTAGGCCTGTTTGGCAGAGGCAATATTTAGCCTTTAGCACCTaGAATTTGAGGCAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: LVCLNLLLTIRPVWQRQYLAFST*NLRQKG
Trigger: ACCTTTCTGCCTCAAATTCCAGGTGCTAAAGGCTAA...ATATTGCCTCTGCCAAACAGGCCTAATAGTTAAAAGCAAGTTGAGACAAACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CCA 90 bp AAGGAAATTTCCAAAGTCTTCATCGTAGCAACGACACCCACTGAAATAGAAAAGAGGCTGCGGCTGAATTaGCGAGATGAAGAATTATGT +
Preference number: 4 (lower is better)
Translates to: KEISKVFIVATTPTEIEKRLRLN*RDEELC
Trigger: ACATAATTCTTCATCTCGCCAATTCAGCCGCAGCCT...CTTTTCTATTTCAGTGGGTGTCGTTGCTACGATGAAGACTTTGGAAATTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR TCA 90 bp ACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTAAATCCCATCAGAGAACATCTTaGAGTCTGTGTATTTCCCTA +
Preference number: 4 (lower is better)
Translates to: TDGYKEYVMSFQAMSPKSHQRTS*SLCISL
Trigger: TAGGGAAATACACAGACTTCAAGATGTTCTCTGATG...GGATTTAGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp AATTTTGTGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCCTCTCTCTGTTTTATTaGTCCAGGAAGGCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: NFVFRLGSHPQDTSLCTCLSLFY*SRKALY
Trigger: ATACAGGGCCTTCCTGGATCAATAAAACAGAGAGAG...GCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACACAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp ACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTAAATCCAAATCCAAAACTTTTTaGGTGCTGACACCACCACTT +
Preference number: 4 (lower is better)
Translates to: TDGYKEYVMSFQAMSPKSKSKTF*VLTPPL
Trigger: AAGTGGTGGTGTCAGCACTCAAAAAGTTTTGGATTT...GGATTTAGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp CTGGTTTGTCTCAACTTGCTTTTAACTATTAGGCCTGTTTGGCAGAGGCAATATAAATCCAAAACTTTTTaGGTGCTGACACCACCACTT +
Preference number: 4 (lower is better)
Translates to: LVCLNLLLTIRPVWQRQYKSKTF*VLTPPL
Trigger: AAGTGGTGGTGTCAGCACTCAAAAAGTTTTGGATTT...ATATTGCCTCTGCCAAACAGGCCTAATAGTTAAAAGCAAGTTGAGACAAACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR TCA 90 bp TTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTTCTCTCTATCGGCTATaGTCCCCAAGTTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LVNPKIAGFLKIVVEVFSSLYRL*SPSFLF
Trigger: AAAAAGAAAACTTGGGGATCATAGCCGATAGAGAGA...ACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTATCTCTCTATCGGCTATaGTCCCCAAGTTTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVSLYRL*SPSFLF
Trigger: AAAAAGAAAACTTGGGGATCATAGCCGATAGAGAGA...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp TGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCAAATATTAGAAAAGTGGTGGAGTaGGGAATGGATGCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: CLDLDLIPKIPHYVHANIRKVVE*GMDACL
Trigger: AAGGCAAGCATCCATTCCTCACTCCACCACTTTTCT...AATATTTGCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp AAGGAAATTTCCAAAGTCTTCATCGTAGCAACGACACCCACTGAAATAGAAAAGATGAGTCCTAAATCCTaGCCCTGTCCTAAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: KEISKVFIVATTPTEIEKMSPKS*PCPKRE
Trigger: TTCTCTTTTAGGACAGGGTCAGGATTTAGGACTCAT...CTTTTCTATTTCAGTGGGTGTCGTTGCTACGATGAAGACTTTGGAAATTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR GCA 90 bp AATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTGTTTTCACTTCTTTTAGCATTTaGTGGAGATTGATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: NPKIAGFLKIVVEVFSVFTSFSI*WRLMLG
Trigger: TCCCAGCATCAATCTCCAGCAAATGCTAAAAGAAGT...GAAAACACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR GCA 90 bp TTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTACTTCTTTTAGCATTTaGTGGAGATTGATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LVNPKIAGFLKIVVEVFSTSFSI*WRLMLG
Trigger: TCCCAGCATCAATCTCCAGCAAATGCTAAAAGAAGT...ACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR GCA 90 bp TGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCAAATATTCCATTGACTTTTCGATaGTCCAAGGGCCAATCTCCA +
Preference number: 4 (lower is better)
Translates to: CLDLDLIPKIPHYVHANIPLTFR*SKGQSP
Trigger: TGGAGATTGGCCCTTGGAGCATCGAAAAGTCAATGG...AATATTTGCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR GCA 90 bp TTTGAGGCAGAAAGGTATGAGTTAGGCAACCTTTCTTGCCATAATCCCAGTTTTTTAGGCAACCTTTCTTaGCATAATCCCAGTTTTGAC +
Preference number: 4 (lower is better)
Translates to: FEAERYELGNLSCHNPSFLGNLS*HNPSFD
Trigger: GTCAAAACTGGGATTATGGCAAGAAAGGTTGCCTAA...AAAACTGGGATTATGGCAAGAAAGGTTGCCTAACTCATACCTTTCTGCCTCAAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CCA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAATCTTTTGCAATCTGTaGTTCCTTGGTTGGACAAGA +
Preference number: 4 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVIFCNL*FLGWTR
Trigger: TCTTGTCCAACCAAGGAACCACAGATTGCAAAAGAT...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp AATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTGTTTTCGCTTGCCTTTGTTCTTaGCCTATTATTAGTGAATCC +
Preference number: 4 (lower is better)
Translates to: NPKIAGFLKIVVEVFSVFACLCS*PIISES
Trigger: GGATTCACTAATAATAGGCCAAGAACAAAGGCAAGC...GAAAACACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp AATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTGTTTTCACTGAAATAGAAAAGTaGTGGAGTGAGGAATGGATG +
Preference number: 4 (lower is better)
Translates to: NPKIAGFLKIVVEVFSVFTEIEK*WSEEWM
Trigger: CATCCATTCCTCACTCCACCACTTTTCTATTTCAGT...GAAAACACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGTTTTGCACAATGGATaGGTATTAGAGTTTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVVLHNG*VLEFAL
Trigger: CAAGGCAAACTCTAATACCCATCCATTGTGCAAAAC...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CCA 90 bp TTTGAGGCAGAAAGGTATGAGTTAGGCAACCTTTCTTGCCATAATCCCAGTTTTTGTGGTTTTGCACAATaGATGGGTATTAGAGTTTGC +
Preference number: 4 (lower is better)
Translates to: FEAERYELGNLSCHNPSFCGFAQ*MGIRVC
Trigger: GCAAACTCTAATACCCATCCATTGTGCAAAACCACA...AAAACTGGGATTATGGCAAGAAAGGTTGCCTAACTCATACCTTTCTGCCTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR TCA 90 bp AATTTTGTGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCGACCAACTCTTTAGGTaGAAGAGATTTGACTACGAC +
Preference number: 4 (lower is better)
Translates to: NFVFRLGSHPQDTSLCTCDQLFR*KRFDYD
Trigger: GTCGTAGTCAAATCTCTTTCACCTAAAGAGTTGGTC...GCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACACAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp AAGGAAATTTCCAAAGTCTTCATCGTAGCAACGACACCCACTGAAATAGAAAAGCATCAGAGAACATCTTaGAGTCTGTGTATTTCCCTA +
Preference number: 4 (lower is better)
Translates to: KEISKVFIVATTPTEIEKHQRTS*SLCISL
Trigger: TAGGGAAATACACAGACTTCAAGATGTTCTCTGATG...CTTTTCTATTTCAGTGGGTGTCGTTGCTACGATGAAGACTTTGGAAATTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp AAAAATATTCCCTCCACAGTCTCCATGCCACCTTTAATAACAGAGTCATTCTCTCATCAGAGAACATCTTaGAGTCTGTGTATTTCCCTA +
Preference number: 4 (lower is better)
Translates to: KNIPSTVSMPPLITESFSHQRTS*SLCISL
Trigger: TAGGGAAATACACAGACTTCAAGATGTTCTCTGATG...AGAGAATGACTCTGTTATTAAAGGTGGCATGGAGACTGTGGAGGGAATATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp TTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTGACACCTTTGCTTTCTaGCAGTTCAATGTATACAAA +
Preference number: 4 (lower is better)
Translates to: LVNPKIAGFLKIVVEVFSDTFAF*QFNVYK
Trigger: TTTGTATACATTGAACTGTCAGAAAGCAAAGGTGTC...ACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp AATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTGTTTTCGACACCTTTGCTTTCTaGCAGTTCAATGTATACAAA +
Preference number: 4 (lower is better)
Translates to: NPKIAGFLKIVVEVFSVFDTFAF*QFNVYK
Trigger: TTTGTATACATTGAACTGTCAGAAAGCAAAGGTGTC...GAAAACACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR TCA 90 bp AATTTTGTGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCATGAGTCCTAAATCCTaGCCCTGTCCTAAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: NFVFRLGSHPQDTSLCTCMSPKS*PCPKRE
Trigger: TTCTCTTTTAGGACAGGGTCAGGATTTAGGACTCAT...GCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACACAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp TGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCAAATATTATACTTGCGTGCTTGTaGTTTTGCACAATGGATGGG +
Preference number: 4 (lower is better)
Translates to: CLDLDLIPKIPHYVHANIILACL*FCTMDG
Trigger: CCCATCCATTGTGCAAAACCACAAGCACGCAAGTAT...AATATTTGCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR GCA 90 bp ACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTAAATCCTATTTAATACTTGCGTaGTTGTGGTTTTGCACAATG +
Preference number: 4 (lower is better)
Translates to: TDGYKEYVMSFQAMSPKSYLILA*LWFCTM
Trigger: CATTGTGCAAAACCACAAGCACGCAAGTATTAAATA...GGATTTAGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CCA 90 bp AATTTTGTGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCGTACTCATGGTACACTaGTCCTTTCAAAATATAGGG +
Preference number: 4 (lower is better)
Translates to: NFVFRLGSHPQDTSLCTCVLMVH*SFQNIG
Trigger: CCCTATATTTTGAAAGGACCAGTGTACCATGAGTAC...GCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACACAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp GTCGCTAAGATAGTGACACCTTTGCTTTCTGACAGTTCAATGTATACAAACTTTGCTTGCCTTTGTTCTTaGCCTATTATTAGTGAATCC +
Preference number: 4 (lower is better)
Translates to: VAKIVTPLLSDSSMYTNFACLCS*PIISES
Trigger: GGATTCACTAATAATAGGCCAAGAACAAAGGCAAGC...AAAGTTTGTATACATTGAACTGTCAGAAAGCAAAGGTGTCACTATCTTAGCGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CCA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTACTATTAGGCCTGTTTaGCAGAGGCAATATAAATTT +
Preference number: 4 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSTIRPV*QRQYKF
Trigger: AAATTTATATTGCCTCTGCCAAACAGGCCTAATAGT...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CCA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAACTATTAGGCCTGTTTaGCAGAGGCAATATAAATTT +
Preference number: 4 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVTIRPV*QRQYKF
Trigger: AAATTTATATTGCCTCTGCCAAACAGGCCTAATAGT...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR GCA 90 bp TGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCAAATATTACTTCTTTTAGCATTTaGTGGAGATTGATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: CLDLDLIPKIPHYVHANITSFSI*WRLMLG
Trigger: TCCCAGCATCAATCTCCAGCAAATGCTAAAAGAAGT...AATATTTGCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR GCA 90 bp TGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCAAATATTTTAGGCAACCTTTCTTaGCATAATCCCAGTTTTGAC +
Preference number: 4 (lower is better)
Translates to: CLDLDLIPKIPHYVHANILGNLS*HNPSFD
Trigger: GTCAAAACTGGGATTATGGCAAGAAAGGTTGCCTAA...AATATTTGCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR GCA 90 bp AATTTTGTGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCTATTTAATACTTGCGTaGTTGTGGTTTTGCACAATG +
Preference number: 4 (lower is better)
Translates to: NFVFRLGSHPQDTSLCTCYLILA*LWFCTM
Trigger: CATTGTGCAAAACCACAAGCACGCAAGTATTAAATA...GCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACACAAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CAA 90 bp GAACAAGTTCCATTCCATCACGTACTTCGGGTTTGCTGGACTGGCGCTCGGCATGCAATCTGTGGTTCCTaGGTTGGACAAGAAAGAGTC +
Preference number: 5 (lower is better)
Translates to: EQVPFHHVLRVCWTGARHAICGS*VGQERV
Trigger: GACTCTTTCTTGTCCAACCAAGGAACCACAGATTGC...ATGCCGAGCGCCAGTCCAGCAAACCCGAAGTACGTGATGGAATGGAACTTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530529.5
CDS-3UTR CAA 90 bp AGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGTCACGTACTTCGGGTTaGCTGGACTGGCGCTCGGCA +
Preference number: 5 (lower is better)
Translates to: RFNLSLKCSRDTQECDSGSRTSG*LDWRSA
Trigger: TGCCGAGCGCCAGTCCAGCAAACCCGAAGTACGTGA...CCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR CAA 90 bp ACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGTCTTCTATACTGTCACGTACTTCGGGTTaGCTGGACTGGCGCTCGGCA +
Preference number: 5 (lower is better)
Translates to: TYIKPPGELVHLVQSSILSRTSG*LDWRSA
Trigger: TGCCGAGCGCCAGTCCAGCAAACCCGAAGTACGTGA...CAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp CTGGTTTGTCTCAACTTGCTTTTAACTATTAGGCCTGTTTGGCAGAGGCAATATTCACGTACTTCGGGTTaGCTGGACTGGCGCTCGGCA +
Preference number: 5 (lower is better)
Translates to: LVCLNLLLTIRPVWQRQYSRTSG*LDWRSA
Trigger: TGCCGAGCGCCAGTCCAGCAAACCCGAAGTACGTGA...ATATTGCCTCTGCCAAACAGGCCTAATAGTTAAAAGCAAGTTGAGACAAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS CCA 90 bp GAGAGGAGATCATTTGTAACACCCCGCATGGCTTCAAGCATGGAGTaGGTGATGTCATACGTTGGAAGGACAACATCTCTTGAATCCAGA +
Preference number: 5 (lower is better)
Translates to: ERRSFVTPRMASSME*VMSYVGRTTSLESR
Trigger: TCTGGATTCAAGAGATGTTGTCCTTCCAACGTATGACATCACCCACTCCATGCTTGAAGCCATGCGGGGTGTTACAAATGATCTCCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp TTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCTGGAAGGACAACATCTCTaGAATCCAGAGAGCCACACC +
Preference number: 5 (lower is better)
Translates to: FNLSLKCSRDTQECDSGLEGQHL*NPESHT
Trigger: GGTGTGGCTCTCTGGATTCAAGAGATGTTGTCCTTC...CAGCCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGCACGAAATTCCTaGAACCCGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVEARNS*NPGGRG
Trigger: ACCTCTGCCTCCCGGGTTCAAGGAATTTCGTGCCTC...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530529.5
CDS TCA 90 bp CCTGTCCAAAGGTTTAGGGACATGTATCCGGACCAACTCTTTAGGTaGAAGAGATTTGACTACGACTTTGAATGGTGTTTCACCTGCGGG +
Preference number: 5 (lower is better)
Translates to: PVQRFRDMYPDQLFR*KRFDYDFEWCFTCG
Trigger: CCCGCAGGTGAAACACCATTCAAAGTCGTAGTCAAATCTCTTTCACCTAAAGAGTTGGTCCGGATACATGTCCCTAAACCTTTGGACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323468.10
CDS TCA 90 bp CATAATATGGCGAGTCCTGCTTTAAAACCAGACTGTCGCCCAGCATaGGATATGGATATCTGTAAGCAGCCACGGTCCCATCCACATTTA +
Preference number: 5 (lower is better)
Translates to: HNMASPALKPDCRPA*DMDICKQPRSHPHL
Trigger: TAAATGTGGATGGGACCGTGGCTGCTTACAGATATCCATATCTCATGCTGGGCGACAGTCTGGTTTTAAAGCAGGACTCGCCATATTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp AAGCCTGAAACACTCCTGGTCCTAAGCATTTCAGATGAGGGATACTCAACCAGTGCAATCTGTGGTTCCTaGGTTGGACAAGAAAGAGTC +
Preference number: 5 (lower is better)
Translates to: KPETLLVLSISDEGYSTSAICGS*VGQERV
Trigger: GACTCTTTCTTGTCCAACCAAGGAACCACAGATTGC...ACTGGTTGAGTATCCCTCATCTGAAATGCTTAGGACCAGGAGTGTTTCAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp CCTTGGACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTGAAGGACAACATCTCTaGAATCCAGAGAGCCACACC +
Preference number: 5 (lower is better)
Translates to: PWTDGYKEYVMSFQAMSPEGQHL*NPESHT
Trigger: GGTGTGGCTCTCTGGATTCAAGAGATGTTGTCCTTC...AGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGTCCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp TTTTCCTGTGGCACTGGCAGATGGCTGTGCTATCTTCTGGCTGAGGAACAAGTTAAGAAACCCATCAACTaGGCTTTTCCAAGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: FSCGTGRWLCYLLAEEQVKKPIN*AFPSSF
Trigger: AAAGGAGCTTGGAAAAGCCAAGTTGATGGGTTTCTT...AACTTGTTCCTCAGCCAGAAGATAGCACAGCCATCTGCCAGTGCCACAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530529.5
CDS-3UTR CAA 90 bp GTCGCTAAGATAGTGACACCTTTGCTTTCTGACAGTTCAATGTATACAAACTTTTCACGTACTTCGGGTTaGCTGGACTGGCGCTCGGCA +
Preference number: 5 (lower is better)
Translates to: VAKIVTPLLSDSSMYTNFSRTSG*LDWRSA
Trigger: TGCCGAGCGCCAGTCCAGCAAACCCGAAGTACGTGA...AAAGTTTGTATACATTGAACTGTCAGAAAGCAAAGGTGTCACTATCTTAGCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp GGGCTCAGGACAGCTTGCTCTTATTTAATACTTGCGTGCTTGTGGTTTTGCACATCCTTTGGAAGATCTTaGAGGCCAGGAACTGTCATG +
Preference number: 5 (lower is better)
Translates to: GLRTACSYLILACLWFCTSFGRS*RPGTVM
Trigger: CATGACAGTTCCTGGCCTCAAAGATCTTCCAAAGGA...TGTGCAAAACCACAAGCACGCAAGTATTAAATAAGAGCAAGCTGTCCTGAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434945.6
CDS-3UTR CAA 90 bp TTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCTGGATTTGACTACGACTTaGAATGGTGTTTCACCTGCG +
Preference number: 5 (lower is better)
Translates to: FNLSLKCSRDTQECDSGLDLTTT*NGVSPA
Trigger: CGCAGGTGAAACACCATTCAAAGTCGTAGTCAAATC...CAGCCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323468.10
CDS-3UTR CAA 90 bp ACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGTCTTCTATACTGGCTCTCTCTGTTTTATaGATCCAGGAAGGCCCTGTA +
Preference number: 5 (lower is better)
Translates to: TYIKPPGELVHLVQSSILALSVL*IQEGPV
Trigger: TACAGGGCCTTCCTGGATCAATAAAACAGAGAGAGC...CAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp AGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGGCTCTCTCTGTTTTATaGATCCAGGAAGGCCCTGTA +
Preference number: 5 (lower is better)
Translates to: RFNLSLKCSRDTQECDSGALSVL*IQEGPV
Trigger: TACAGGGCCTTCCTGGATCAATAAAACAGAGAGAGC...CCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR CAA 90 bp AGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGGGAGAACTAGTCCACTaGGTGCAGTCTTCTATACTG +
Preference number: 5 (lower is better)
Translates to: RFNLSLKCSRDTQECDSGGELVH*VQSSIL
Trigger: CAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCC...CCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp TTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCTGTGCGTGCTTGTGGTTTaGCACAATGGATGGGTATTA +
Preference number: 5 (lower is better)
Translates to: FNLSLKCSRDTQECDSGLCVLVV*HNGWVL
Trigger: TAATACCCATCCATTGTGCAAAACCACAAGCACGCA...CAGCCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CAA 90 bp AAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGTCTTCTATACTGTCCTTCACTTAATACTTGCGTGCTaGTGGTTTTGCACAATGGAT +
Preference number: 5 (lower is better)
Translates to: KATGRTSPLGAVFYTVLHLILAC*WFCTMD
Trigger: ATCCATTGTGCAAAACCACAAGCACGCAAGTATTAA...GTGAAGGACAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCCCGGTGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CAA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGAAGGACAACATCTCTaGAATCCAGAGAGCCACACC +
Preference number: 5 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSEGQHL*NPESHT
Trigger: GGTGTGGCTCTCTGGATTCAAGAGATGTTGTCCTTC...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp TTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCTGAAGAAACCCATCAACTaGGCTTTTCCAAGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: FNLSLKCSRDTQECDSGLKKPIN*AFPSSF
Trigger: AAAGGAGCTTGGAAAAGCCAAGTTGATGGGTTTCTT...CAGCCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR CAA 90 bp AAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGTCTTCTATACTGTCCTTCACTCTTTTGCAATCTTCTaGGCTTCTTCATCATTTTCC +
Preference number: 5 (lower is better)
Translates to: KATGRTSPLGAVFYTVLHSFAIF*ASSSFS
Trigger: GGAAAATGATGAAGAAGCCAAGAAGATTGCAAAAGA...GTGAAGGACAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCCCGGTGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp ACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGTCTTCTATACTGCTCAAAGTTCTTCTCTaGAAGGCTTTTTCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: TYIKPPGELVHLVQSSILLKVLL*KAFSCG
Trigger: GCCACAGGAAAAAGCCTTCAAGAGAAGAACTTTGAG...CAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp TTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCTGTTTAGCACCTGGAATTaGAGGCAGAAAGGTATGAGT +
Preference number: 5 (lower is better)
Translates to: FNLSLKCSRDTQECDSGLFSTWN*RQKGMS
Trigger: ACTCATACCTTTCTGCCTCAAATTCCAGGTGCTAAA...CAGCCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CAA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGCAATCTGTGGTTCCTaGGTTGGACAAGAAAGAGTC +
Preference number: 5 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSAICGS*VGQERV
Trigger: GACTCTTTCTTGTCCAACCAAGGAACCACAGATTGC...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGCTCTCTCTGTTTTATaGATCCAGGAAGGCCCTGTA +
Preference number: 5 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSALSVL*IQEGPV
Trigger: TACAGGGCCTTCCTGGATCAATAAAACAGAGAGAGC...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR CAA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGAGAACTAGTCCACTaGGTGCAGTCTTCTATACTG +
Preference number: 5 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSGELVH*VQSSIL
Trigger: CAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCC...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp CTGGTTTGTCTCAACTTGCTTTTAACTATTAGGCCTGTTTGGCAGAGGCAATATGTGAGGAATGGATGCTaGCCTTTGTTCTTGGCCTAT +
Preference number: 5 (lower is better)
Translates to: LVCLNLLLTIRPVWQRQYVRNGC*PLFLAY
Trigger: ATAGGCCAAGAACAAAGGCAAGCATCCATTCCTCAC...ATATTGCCTCTGCCAAACAGGCCTAATAGTTAAAAGCAAGTTGAGACAAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CAA 90 bp AGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGGTTTGCCTTGGATACTaGGCATTGATTAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: RFNLSLKCSRDTQECDSGVCLGY*ALIRLF
Trigger: GAACAGTCTAATCAATGCCAAGTATCCAAGGCAAAC...CCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CAA 90 bp CTGCTATATCCATCTACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGGTTTGCCTTGGATACTaGGCATTGATTAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: LLYPSTYIKPPGELVHLVVCLGY*ALIRLF
Trigger: GAACAGTCTAATCAATGCCAAGTATCCAAGGCAAAC...CACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGTAGATGGATATAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CAA 90 bp CCTTGGACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTGCCATAATCCCAGTTTaGACAAGCCTCAAACACAAT +
Preference number: 5 (lower is better)
Translates to: PWTDGYKEYVMSFQAMSPAIIPV*TSLKHN
Trigger: ATTGTGTTTGAGGCTTGTCAAAACTGGGATTATGGC...AGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGTCCAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CAA 90 bp ACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGTCTTCTATACTGCTGAATCTGCCTGGTTaGTCTCAACTTGCTTTTAAC +
Preference number: 5 (lower is better)
Translates to: TYIKPPGELVHLVQSSILLNLPG*SQLAFN
Trigger: GTTAAAAGCAAGTTGAGACAAACCAGGCAGATTCAG...CAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS TCA 90 bp TTCTCTTGGAAAAAGAAATATCCTGTAATTCCTGCATCTAGTAGCTaGGGATTTTCTTTGGACAGCTGTACCAACTGGAGCCTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: FSWKKKYPVIPASSS*GFSLDSCTNWSLSS
Trigger: AGAGGAGAGGCTCCAGTTGGTACAGCTGTCCAAAGAAAATCCTCAGCTACTAGATGCAGGAATTACAGGATATTTCTTTTTCCAAGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR CAA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTTCTGTGGTTCCTTGGTaGGACAAGAAAGAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSSVVPW*DKKESS
Trigger: AGAAGACTCTTTCTTGTCCAACCAAGGAACCACAGA...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp TTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCTGGGAGAAGGACCTTTCTaGTCAATGATAACAAAATCT +
Preference number: 5 (lower is better)
Translates to: FNLSLKCSRDTQECDSGLGEGPF*SMITKS
Trigger: AGATTTTGTTATCATTGACAAGAAAGGTCCTTCTCC...CAGCCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp TTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCTGTCTTTTGCAATCTTCTaGGCTTCTTCATCATTTTCC +
Preference number: 5 (lower is better)
Translates to: FNLSLKCSRDTQECDSGLSFAIF*ASSSFS
Trigger: GGAAAATGATGAAGAAGCCAAGAAGATTGCAAAAGA...CAGCCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR CAA 90 bp ACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGTCTTCTATACTGTCAACTGTCCTTCTTTaGCAATCTTCTTGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: TYIKPPGELVHLVQSSILSTVLL*QSSWLL
Trigger: AAGAAGCCAAGAAGATTGCAAAAGAAGGACAGTTGA...CAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp CTGGTTTGTCTCAACTTGCTTTTAACTATTAGGCCTGTTTGGCAGAGGCAATATCTCAAAGTTCTTCTCTaGAAGGCTTTTTCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: LVCLNLLLTIRPVWQRQYLKVLL*KAFSCG
Trigger: GCCACAGGAAAAAGCCTTCAAGAGAAGAACTTTGAG...ATATTGCCTCTGCCAAACAGGCCTAATAGTTAAAAGCAAGTTGAGACAAACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CAA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTCTCAAAGTTCTTCTCTaGAAGGCTTTTTCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSLKVLL*KAFSCG
Trigger: GCCACAGGAAAAAGCCTTCAAGAGAAGAACTTTGAG...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR CAA 90 bp AAAAATATTCCCTCCACAGTCTCCATGCCACCTTTAATAACAGAGTCATTCTCTGGAGAACTAGTCCACTaGGTGCAGTCTTCTATACTG +
Preference number: 5 (lower is better)
Translates to: KNIPSTVSMPPLITESFSGELVH*VQSSIL
Trigger: CAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCC...AGAGAATGACTCTGTTATTAAAGGTGGCATGGAGACTGTGGAGGGAATATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp TTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCTGATGTTGTCTCGGGCTTaGGCAAAATTTAGTTTAAAG +
Preference number: 5 (lower is better)
Translates to: FNLSLKCSRDTQECDSGLMLSRA*AKFSLK
Trigger: CTTTAAACTAAATTTTGCCAAAGCCCGAGACAACAT...CAGCCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp ACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTAAATCCTGCGTGCTTGTGGTTTaGCACAATGGATGGGTATTA +
Preference number: 5 (lower is better)
Translates to: TDGYKEYVMSFQAMSPKSCVLVV*HNGWVL
Trigger: TAATACCCATCCATTGTGCAAAACCACAAGCACGCA...GGATTTAGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CAA 90 bp ACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGTCTTCTATACTGTTAATACTTGCGTGCTaGTGGTTTTGCACAATGGAT +
Preference number: 5 (lower is better)
Translates to: TYIKPPGELVHLVQSSILLILAC*WFCTMD
Trigger: ATCCATTGTGCAAAACCACAAGCACGCAAGTATTAA...CAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CAA 90 bp ACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTAAATCCTCTTCTCCTCAGATATaGGTGAATCTCCTCCCAAAC +
Preference number: 5 (lower is better)
Translates to: TDGYKEYVMSFQAMSPKSSSPQI*VNLLPN
Trigger: GTTTGGGAGGAGATTCACCAATATCTGAGGAGAAGA...GGATTTAGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CAA 90 bp AATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTGTTTTCTCTTCTCCTCAGATATaGGTGAATCTCCTCCCAAAC +
Preference number: 5 (lower is better)
Translates to: NPKIAGFLKIVVEVFSVFSSPQI*VNLLPN
Trigger: GTTTGGGAGGAGATTCACCAATATCTGAGGAGAAGA...GAAAACACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CAA 90 bp TTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGCTGGATTTGACTACGACTTaGAATGGTGTTTCACCTAAA +
Preference number: 5 (lower is better)
Translates to: FNLSLKCSRDTQECDSGLDLTTT*NGVSPK
Trigger: TTTAGGTGAAACACCATTCAAAGTCGTAGTCAAATC...CAGCCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp ACATATATAAAGCCACCGGGAGAACTAGTCCACTTGGTGCAGTCTTCTATACTGGGAGAAGGACCTTTCTaGTCAATGATAACAAAATCT +
Preference number: 5 (lower is better)
Translates to: TYIKPPGELVHLVQSSILGEGPF*SMITKS
Trigger: AGATTTTGTTATCATTGACAAGAAAGGTCCTTCTCC...CAGTATAGAAGACTGCACCAAGTGGACTAGTTCTCCCGGTGGCTTTATATATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp TTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTAAGAAACCCATCAACTaGGCTTTTCCAAGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: LVNPKIAGFLKIVVEVFSKKPIN*AFPSSF
Trigger: AAAGGAGCTTGGAAAAGCCAAGTTGATGGGTTTCTT...ACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp AAGGAAATTTCCAAAGTCTTCATCGTAGCAACGACACCCACTGAAATAGAAAAGCTCAAAGTTCTTCTCTaGAAGGCTTTTTCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: KEISKVFIVATTPTEIEKLKVLL*KAFSCG
Trigger: GCCACAGGAAAAAGCCTTCAAGAGAAGAACTTTGAG...CTTTTCTATTTCAGTGGGTGTCGTTGCTACGATGAAGACTTTGGAAATTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp AGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTGGGATTTTGTGTTTAGACTaGGATCTCATCCCCAAGATA +
Preference number: 5 (lower is better)
Translates to: RFNLSLKCSRDTQECDSGILCLD*DLIPKI
Trigger: TATCTTGGGGATGAGATCCAAGTCTAAACACAAAAT...CCCAGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp AGTAGGTCCCTAGCCATCAACTGTCCTTCTTTTGCAATCTTCTTGGCTTCTTCAATTTTGTGTTTAGACTaGGATCTCATCCCCAAGATA +
Preference number: 5 (lower is better)
Translates to: SRSLAINCPSFAIFLASSILCLD*DLIPKI
Trigger: TATCTTGGGGATGAGATCCAAGTCTAAACACAAAAT...TGAAGAAGCCAAGAAGATTGCAAAAGAAGGACAGTTGATGGCTAGGGACCTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530529.5
CDS-3UTR CAA 90 bp AATTTTGTGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCGTGAGGAATGGATGCTaGCCTTTGTTCTTGGCCTAT +
Preference number: 5 (lower is better)
Translates to: NFVFRLGSHPQDTSLCTCVRNGC*PLFLAY
Trigger: ATAGGCCAAGAACAAAGGCAAGCATCCATTCCTCAC...GCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACACAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp TTTGAGGCAGAAAGGTATGAGTTAGGCAACCTTTCTTGCCATAATCCCAGTTTTGCCATAATCCCAGTTTaGACAAGCCTCAAACACAAT +
Preference number: 5 (lower is better)
Translates to: FEAERYELGNLSCHNPSFAIIPV*TSLKHN
Trigger: ATTGTGTTTGAGGCTTGTCAAAACTGGGATTATGGC...AAAACTGGGATTATGGCAAGAAAGGTTGCCTAACTCATACCTTTCTGCCTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CAA 90 bp AATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTGTTTTCCTGAATCTGCCTGGTTaGTCTCAACTTGCTTTTAAC +
Preference number: 5 (lower is better)
Translates to: NPKIAGFLKIVVEVFSVFLNLPG*SQLAFN
Trigger: GTTAAAAGCAAGTTGAGACAAACCAGGCAGATTCAG...GAAAACACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CAA 90 bp TTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTTCATCAGAGAACATCTaGAAGTCTGTGTATTTCCCT +
Preference number: 5 (lower is better)
Translates to: LVNPKIAGFLKIVVEVFSSSENI*KSVYFP
Trigger: AGGGAAATACACAGACTTCAAGATGTTCTCTGATGA...ACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp TTTGAGGCAGAAAGGTATGAGTTAGGCAACCTTTCTTGCCATAATCCCAGTTTTTCATCAGAGAACATCTaGAAGTCTGTGTATTTCCCT +
Preference number: 5 (lower is better)
Translates to: FEAERYELGNLSCHNPSFSSENI*KSVYFP
Trigger: AGGGAAATACACAGACTTCAAGATGTTCTCTGATGA...AAAACTGGGATTATGGCAAGAAAGGTTGCCTAACTCATACCTTTCTGCCTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CAA 90 bp AATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTGTTTTCTCATCAGAGAACATCTaGAAGTCTGTGTATTTCCCT +
Preference number: 5 (lower is better)
Translates to: NPKIAGFLKIVVEVFSVFSSENI*KSVYFP
Trigger: AGGGAAATACACAGACTTCAAGATGTTCTCTGATGA...GAAAACACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTTCAACTGTCCTTCTTTaGCAATCTTCTTGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSSTVLL*QSSWLL
Trigger: AAGAAGCCAAGAAGATTGCAAAAGAAGGACAGTTGA...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS-3UTR CAA 90 bp AATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTGTTTTCAAGATAGTGACACCTTaGCTTTCTGACAGTTCAATG +
Preference number: 5 (lower is better)
Translates to: NPKIAGFLKIVVEVFSVFKIVTP*LSDSSM
Trigger: CATTGAACTGTCAGAAAGCAAAGGTGTCACTATCTT...GAAAACACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp TTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTAAGATAGTGACACCTTaGCTTTCTGACAGTTCAATG +
Preference number: 5 (lower is better)
Translates to: LVNPKIAGFLKIVVEVFSKIVTP*LSDSSM
Trigger: CATTGAACTGTCAGAAAGCAAAGGTGTCACTATCTT...ACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp AATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGAGGTTTTCAGTGTTTTCAATTTCTCCTTAATGTaGTCTCGGGCTTTGGCAAAA +
Preference number: 5 (lower is better)
Translates to: NPKIAGFLKIVVEVFSVFNFSLM*SRALAK
Trigger: TTTTGCCAAAGCCCGAGACAACATTAAGGAGAAATT...GAAAACACTGAAAACCTCTACAACAATCTTCAGGAAGCCTGCTATCTTGGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAAATTTCTCCTTAATGTaGTCTCGGGCTTTGGCAAAA +
Preference number: 5 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVNFSLM*SRALAK
Trigger: TTTTGCCAAAGCCCGAGACAACATTAAGGAGAAATT...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp TGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCAAATATTGTGAGGAATGGATGCTaGCCTTTGTTCTTGGCCTAT +
Preference number: 5 (lower is better)
Translates to: CLDLDLIPKIPHYVHANIVRNGC*PLFLAY
Trigger: ATAGGCCAAGAACAAAGGCAAGCATCCATTCCTCAC...AATATTTGCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp AAAAATATTCCCTCCACAGTCTCCATGCCACCTTTAATAACAGAGTCATTCTCTTTTAGCACCTGGAATTaGAGGCAGAAAGGTATGAGT +
Preference number: 5 (lower is better)
Translates to: KNIPSTVSMPPLITESFSFSTWN*RQKGMS
Trigger: ACTCATACCTTTCTGCCTCAAATTCCAGGTGCTAAA...AGAGAATGACTCTGTTATTAAAGGTGGCATGGAGACTGTGGAGGGAATATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CAA 90 bp CTTAGATTCAATCTTTCCTTAAAGTGTAGCCGGGATACACAGGAGTGTGATTCTCTGGTTTGTCTCAACTaGCTTTTAACTATTAGGCCT +
Preference number: 5 (lower is better)
Translates to: LRFNLSLKCSRDTQECDSLVCLN*LLTIRP
Trigger: AGGCCTAATAGTTAAAAGCAAGTTGAGACAAACCAG...AGAATCACACTCCTGTGTATCCCGGCTACACTTTAAGGAAAGATTGAATCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CAA 90 bp TGTTCTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTCTGGTTTGTCTCAACTaGCTTTTAACTATTAGGCCT +
Preference number: 5 (lower is better)
Translates to: CSWPIISESQDSRLPEDCLVCLN*LLTIRP
Trigger: AGGCCTAATAGTTAAAAGCAAGTTGAGACAAACCAG...ACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CAA 90 bp ACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTAAATCCTTAGGTGAAAGAGATTaGACTACGACTTTGAATGGT +
Preference number: 5 (lower is better)
Translates to: TDGYKEYVMSFQAMSPKSLGERD*TTTLNG
Trigger: ACCATTCAAAGTCGTAGTCAAATCTCTTTCACCTAA...GGATTTAGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp TGTTCTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTTAGGTGAAAGAGATTaGACTACGACTTTGAATGGT +
Preference number: 5 (lower is better)
Translates to: CSWPIISESQDSRLPEDCLGERD*TTTLNG
Trigger: ACCATTCAAAGTCGTAGTCAAATCTCTTTCACCTAA...ACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAGAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp ACTGATGGTTACAAGGAGTATGTAATGAGCTTTCAGGCTATGAGTCCTAAATCCGGAGAAGGACCTTTCTaGTCAATGATAACAAAATCT +
Preference number: 5 (lower is better)
Translates to: TDGYKEYVMSFQAMSPKSGEGPF*SMITKS
Trigger: AGATTTTGTTATCATTGACAAGAAAGGTCCTTCTCC...GGATTTAGGACTCATAGCCTGAAAGCTCATTACATACTCCTTGTAACCATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp AATTTTGTGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCAAGAAACCCATCAACTaGGCTTTTCCAAGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: NFVFRLGSHPQDTSLCTCKKPIN*AFPSSF
Trigger: AAAGGAGCTTGGAAAAGCCAAGTTGATGGGTTTCTT...GCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACACAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp CTGGTTTGTCTCAACTTGCTTTTAACTATTAGGCCTGTTTGGCAGAGGCAATATATGTTGTCTCGGGCTTaGGCAAAATTTAGTTTAAAG +
Preference number: 5 (lower is better)
Translates to: LVCLNLLLTIRPVWQRQYMLSRA*AKFSLK
Trigger: CTTTAAACTAAATTTTGCCAAAGCCCGAGACAACAT...ATATTGCCTCTGCCAAACAGGCCTAATAGTTAAAAGCAAGTTGAGACAAACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6
CDS-3UTR CAA 90 bp AAAAATATTCCCTCCACAGTCTCCATGCCACCTTTAATAACAGAGTCATTCTCTAATTTCTCCTTAATGTaGTCTCGGGCTTTGGCAAAA +
Preference number: 5 (lower is better)
Translates to: KNIPSTVSMPPLITESFSNFSLM*SRALAK
Trigger: TTTTGCCAAAGCCCGAGACAACATTAAGGAGAAATT...AGAGAATGACTCTGTTATTAAAGGTGGCATGGAGACTGTGGAGGGAATATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp CTTGGCCTATTATTAGTGAATCCCAAGATAGCAGGCTTCCTGAAGATTGTTGTAGATTTGACTACGACTTaGAATGGTGTTTCACCTAAA +
Preference number: 5 (lower is better)
Translates to: LGLLLVNPKIAGFLKIVVDLTTT*NGVSPK
Trigger: TTTAGGTGAAACACCATTCAAAGTCGTAGTCAAATC...TACAACAATCTTCAGGAAGCCTGCTATCTTGGGATTCACTAATAATAGGCCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp AAGGAAATTTCCAAAGTCTTCATCGTAGCAACGACACCCACTGAAATAGAAAAGTTAGGTGAAAGAGATTaGACTACGACTTTGAATGGT +
Preference number: 5 (lower is better)
Translates to: KEISKVFIVATTPTEIEKLGERD*TTTLNG
Trigger: ACCATTCAAAGTCGTAGTCAAATCTCTTTCACCTAA...CTTTTCTATTTCAGTGGGTGTCGTTGCTACGATGAAGACTTTGGAAATTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp GTCGCTAAGATAGTGACACCTTTGCTTTCTGACAGTTCAATGTATACAAACTTTTCAACTGTCCTTCTTTaGCAATCTTCTTGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: VAKIVTPLLSDSSMYTNFSTVLL*QSSWLL
Trigger: AAGAAGCCAAGAAGATTGCAAAAGAAGGACAGTTGA...AAAGTTTGTATACATTGAACTGTCAGAAAGCAAAGGTGTCACTATCTTAGCGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp GTCGCTAAGATAGTGACACCTTTGCTTTCTGACAGTTCAATGTATACAAACTTTAAGATAGTGACACCTTaGCTTTCTGACAGTTCAATG +
Preference number: 5 (lower is better)
Translates to: VAKIVTPLLSDSSMYTNFKIVTP*LSDSSM
Trigger: CATTGAACTGTCAGAAAGCAAAGGTGTCACTATCTT...AAAGTTTGTATACATTGAACTGTCAGAAAGCAAAGGTGTCACTATCTTAGCGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp AAGGAAATTTCCAAAGTCTTCATCGTAGCAACGACACCCACTGAAATAGAAAAGATGTTGTCTCGGGCTTaGGCAAAATTTAGTTTAAAG +
Preference number: 5 (lower is better)
Translates to: KEISKVFIVATTPTEIEKMLSRA*AKFSLK
Trigger: CTTTAAACTAAATTTTGCCAAAGCCCGAGACAACAT...CTTTTCTATTTCAGTGGGTGTCGTTGCTACGATGAAGACTTTGGAAATTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp AATTTTGTGTTTAGACTTGGATCTCATCCCCAAGATACCTCATTATGTACATGCTCTTTTGCAATCTTCTaGGCTTCTTCATCATTTTCC +
Preference number: 5 (lower is better)
Translates to: NFVFRLGSHPQDTSLCTCSFAIF*ASSSFS
Trigger: GGAAAATGATGAAGAAGCCAAGAAGATTGCAAAAGA...GCATGTACATAATGAGGTATCTTGGGGATGAGATCCAAGTCTAAACACAAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS-3UTR CAA 90 bp GTCGCTAAGATAGTGACACCTTTGCTTTCTGACAGTTCAATGTATACAAACTTTATTTTGTGTTTAGACTaGGATCTCATCCCCAAGATA +
Preference number: 5 (lower is better)
Translates to: VAKIVTPLLSDSSMYTNFILCLD*DLIPKI
Trigger: TATCTTGGGGATGAGATCCAAGTCTAAACACAAAAT...AAAGTTTGTATACATTGAACTGTCAGAAAGCAAAGGTGTCACTATCTTAGCGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS GCA 72 bp ACTAGTTCGGCCACGAAGGGAAAGGGGAACCAGGCATaGCTCATTATACCCTCCTCCCTTTTGGAATTCAGG +
Preference number: 6 (lower is better)
Translates to: TSSATKGKGNQA*LIIPSSLLEFR
Trigger: CCTGAATTCCAAAAGGGAGGAGGGTATAATGAGGCATGCCTGGTTCCCCTTTCCCTTCGTGGCCGAACTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524787.1
CDS TCA 72 bp GCGAGTCCTGCTTTAAAACCAGACTGTCGCCCAGCATaGGATATGGATATCTGTAAGCAGCCACGGTCCCAT +
Preference number: 6 (lower is better)
Translates to: ASPALKPDCRPA*DMDICKQPRSH
Trigger: ATGGGACCGTGGCTGCTTACAGATATCCATATCTCATGCTGGGCGACAGTCTGGTTTTAAAGCAGGACTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS CAA 90 bp GGTTTAGGGACATGTATCCGGACCAACTCTTTAGGTGAAAGAGATTaGACTACGACTTTGAATGGTGTTTCACCTGCGGGAGAGCGAGTG +
Preference number: 6 (lower is better)
Translates to: GLGTCIRTNSLGERD*TTTLNGVSPAGERV
Trigger: CACTCGCTCTCCCGCAGGTGAAACACCATTCAAAGTCGTAGTCAAATCTCTTTCACCTAAAGAGTTGGTCCGGATACATGTCCCTAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323468.10
CDS CCA 72 bp TCATTTGTAACACCCCGCATGGCTTCAAGCATGGAGTaGGTGATGTCATACGTTGGAAGGACAACATCTCTT +
Preference number: 6 (lower is better)
Translates to: SFVTPRMASSME*VMSYVGRTTSL
Trigger: AAGAGATGTTGTCCTTCCAACGTATGACATCACCCACTCCATGCTTGAAGCCATGCGGGGTGTTACAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS CAA 72 bp ACCAACTCTTTAGGTGAAAGAGATTTGACTACGACTTaGAATGGTGTTTCACCTGCGGGAGAGCGAGTGAGG +
Preference number: 6 (lower is better)
Translates to: TNSLGERDLTTT*NGVSPAGERVR
Trigger: CCTCACTCGCTCTCCCGCAGGTGAAACACCATTCAAAGTCGTAGTCAAATCTCTTTCACCTAAAGAGTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323468.10
CDS TCA 72 bp AGGTTTAGGGACATGTATCCGGACCAACTCTTTAGGTaGAAGAGATTTGACTACGACTTTGAATGGTGTTTC +
Preference number: 6 (lower is better)
Translates to: RFRDMYPDQLFR*KRFDYDFEWCF
Trigger: GAAACACCATTCAAAGTCGTAGTCAAATCTCTTTCACCTAAAGAGTTGGTCCGGATACATGTCCCTAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530529.5
CDS TCA 72 bp AAAAAGAAATATCCTGTAATTCCTGCATCTAGTAGCTaGGGATTTTCTTTGGACAGCTGTACCAACTGGAGC +
Preference number: 6 (lower is better)
Translates to: KKKYPVIPASSS*GFSLDSCTNWS
Trigger: GCTCCAGTTGGTACAGCTGTCCAAAGAAAATCCTCAGCTACTAGATGCAGGAATTACAGGATATTTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323468.10
ENST00000434945.6
ENST00000530318.1
ENST00000530529.5
CDS CAA 72 bp TCCCTAGCCATCAACTGTCCTTCTTTTGCAATCTTCTaGGCTTCTTCATCATTTTCCTTAGCCCATTTAACT +
Preference number: 6 (lower is better)
Translates to: SLAINCPSFAIF*ASSSFSLAHLT
Trigger: AGTTAAATGGGCTAAGGAAAATGATGAAGAAGCCAAGAAGATTGCAAAAGAAGGACAGTTGATGGCTAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323468.10
ENST00000434945.6