RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PODNL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000132000

Ensembl transcript IDs: ENST00000254320.7, ENST00000339560.10, ENST00000538371.6, ENST00000538517.6, ENST00000585607.1, ENST00000586075.1, ENST00000587288.1, ENST00000587458.1, ENST00000587954.1, ENST00000588317.1, ENST00000588764.5, ENST00000588872.2, ENST00000588872.3, ENST00000591353.5, ENST00000671723.1, ENST00000671772.1, ENST00000672070.1, ENST00000672131.1, ENST00000672142.1, ENST00000672348.1, ENST00000672449.1, ENST00000672524.1, ENST00000672870.1, ENST00000673043.1, ENST00000673052.1, ENST00000673567.1, ENST00000673607.1

Found 710 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGCACGCAGGCGGGGTGTGCTGAGGAAGGCCTCGGGGCCCACGTaGCCGATGCGGTTGCCCTCGAGGTGCAGCTCCTCTAGGGCCTCA +
Preference number: 1 (lower is better)
Translates to: RARRRGVLRKASGPT*PMRLPSRCSSSRAS
Trigger: TGAGGCCCTAGAGGAGCTGCACCTCGAGGGCAACCGCATCGGCCACGTGGGCCCCGAGGCCTTCCTCAGCACACCCCGCCTGCGTGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR CCA 90 bp TGCTGGGCCTCTCTAGGATCAGGGGCCCCCTGCCCGTGGCCCACGTaGGGTGGTGGGAGGCAGCCGGATCAGGACCTGCTCCGGATTCCC +
Preference number: 1 (lower is better)
Translates to: CWASLGSGAPCPWPT*GGGRQPDQDLLRIP
Trigger: GGGAATCCGGAGCAGGTCCTGATCCGGCTGCCTCCCACCACCCCACGTGGGCCACGGGCAGGGGGCCCCTGATCCTAGAGAGGCCCAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
3UTR GCA 90 bp AGGAAGGCCTCGGGGCCCACGTGGCCGATGCGGTTGCCCTCGAGGTaGAGCTCCTCTAGGGCCTCAGGCAGGTCCGGGGGCACAAAGGAC +
Preference number: 1 (lower is better)
Translates to: RKASGPTWPMRLPSR*SSSRASGRSGGTKD
Trigger: GTCCTTTGTGCCCCCGGACCTGCCTGAGGCCCTAGAGGAGCTGCACCTCGAGGGCAACCGCATCGGCCACGTGGGCCCCGAGGCCTTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR GCA 90 bp GCCCGTGGCCCACGTGGGGTGGTGGGAGGCAGCCGGATCAGGACCTaGTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGC +
Preference number: 1 (lower is better)
Translates to: ARGPRGVVGGSRIRT*SGFPAVSTTRRFGS
Trigger: GCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGCCTCCCACCACCCCACGTGGGCCACGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
3UTR CCA 90 bp TCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTCTGCTaGGCCTCTCTAGGATCAGGGGCCCCCTGCCCGTGGCCCACGTGG +
Preference number: 1 (lower is better)
Translates to: SVHGPAESQESELLC*ASLGSGAPCPWPTW
Trigger: CCACGTGGGCCACGGGCAGGGGGCCCCTGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
3UTR GCA 90 bp TGGGGTGGTGGGAGGCAGCCGGATCAGGACCTGCTCCGGATTCCCTaGCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGGCCTC +
Preference number: 1 (lower is better)
Translates to: WGGGRQPDQDLLRIP*RVHHTQVWEPQEGL
Trigger: GAGGCCTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGCCTCCCACCACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR TCA 90 bp TGGGAGTTTGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTaGGCCTGGAGTATGCCAGCTGTGTGCCTCTGTGTCTCGGCCAGT +
Preference number: 1 (lower is better)
Translates to: WEFGVGCVPPGRRGL*AWSMPAVCLCVSAS
Trigger: ACTGGCCGAGACACAGAGGCACACAGCTGGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000588872.2
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
3UTR CCA 90 bp AGCTCATTGTGGCTGAGGTCCAGCATCTGGGCAGGGGGTTATAGATaGCATCGTGGCAGCCCCAGGCCTGGGCCACTCAGCTCAGCCAGC +
Preference number: 1 (lower is better)
Translates to: SSLWLRSSIWAGGYR*HRGSPRPGPLSSAS
Trigger: GCTGGCTGAGCTGAGTGGCCCAGGCCTGGGGCTGCCACGATGCCATCTATAACCCCCTGCCCAGATGCTGGACCTCAGCCACAATGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR CCA 90 bp TCTGTGTTGGGAGTTTGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTaGTCTGTGAGCCTGGAGTATGCCAGCTGTGTGCCTCTGTGTCTC +
Preference number: 1 (lower is better)
Translates to: SVLGVWGRVCPARPA*SVSLEYASCVPLCL
Trigger: GAGACACAGAGGCACACAGCTGGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCCCAACACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000588872.2
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
3UTR TCA 90 bp GGAGGAGTCCGTGGACAGAGCCCCCAAAGGGTGCCTGGTCCGTGCTaGGTGCTGGAAGGGTTTGGCTTTATTGTTGCTGCCTCCATCTGT +
Preference number: 1 (lower is better)
Translates to: GGVRGQSPQRVPGPC*VLEGFGFIVAASIC
Trigger: ACAGATGGAGGCAGCAACAATAAAGCCAAACCCTTCCAGCACTCAGCACGGACCAGGCACCCTTTGGGGGCTCTGTCCACGGACTCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
3UTR GCA 90 bp TGGACTGGTTGTGGGGAGGAGTCCGTGGACAGAGCCCCCAAAGGGTaGCTGGTCCGTGCTGAGTGCTGGAAGGGTTTGGCTTTATTGTTG +
Preference number: 1 (lower is better)
Translates to: WTGCGEESVDRAPKG*LVRAECWKGLALLL
Trigger: CAACAATAAAGCCAAACCCTTCCAGCACTCAGCACGGACCAGGCACCCTTTGGGGGCTCTGTCCACGGACTCCTCCCCACAACCAGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
3UTR CCA 90 bp AAGGGTTTGGCTTTATTGTTGCTGCCTCCATCTGTGTTGGGAGTTTaGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTG +
Preference number: 1 (lower is better)
Translates to: KGLALLLLPPSVLGV*GRVCPARPAWSVSL
Trigger: CAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCCCAACACAGATGGAGGCAGCAACAATAAAGCCAAACCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000588872.2
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
3UTR CCA 90 bp AGTGCTGGAAGGGTTTGGCTTTATTGTTGCTGCCTCCATCTGTGTTaGGAGTTTGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTG +
Preference number: 1 (lower is better)
Translates to: SAGRVWLYCCCLHLC*EFGVGCVPPGRRGL
Trigger: CAGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCCCAACACAGATGGAGGCAGCAACAATAAAGCCAAACCCTTCCAGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587954.1
ENST00000588872.2
ENST00000672348.1
ENST00000672449.1
3UTR GCA 90 bp GAGTCCGTGGACAGAGCCCCCAAAGGGTGCCTGGTCCGTGCTGAGTaGTGGAAGGGTTTGGCTTTATTGTTGCTGCCTCCATCTGTGTTG +
Preference number: 1 (lower is better)
Translates to: ESVDRAPKGCLVRAE*WKGLALLLLPPSVL
Trigger: CAACACAGATGGAGGCAGCAACAATAAAGCCAAACCCTTCCAGCACTCAGCACGGACCAGGCACCCTTTGGGGGCTCTGTCCACGGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
3UTR GCA 90 bp GGCCTTGGGCGTCCCTGCAATCACACGTGGCTAGGTCGCACAGGGTaGTGTTTGGTGACCCCAGTGTGTGCCTCAAGACCTCAAAATTCA +
Preference number: 1 (lower is better)
Translates to: GLGRPCNHTWLGRTG*CLVTPVCASRPQNS
Trigger: TGAATTTTGAGGTCTTGAGGCACACACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGCCACGTGTGATTGCAGGGACGCCCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
3UTR CCA 90 bp TCCGTGGACAGAGCCCCCAAAGGGTGCCTGGTCCGTGCTGAGTGCTaGAAGGGTTTGGCTTTATTGTTGCTGCCTCCATCTGTGTTGGGA +
Preference number: 1 (lower is better)
Translates to: SVDRAPKGCLVRAEC*KGLALLLLPPSVLG
Trigger: TCCCAACACAGATGGAGGCAGCAACAATAAAGCCAAACCCTTCCAGCACTCAGCACGGACCAGGCACCCTTTGGGGGCTCTGTCCACGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
3UTR CCA 90 bp GAGCCCCCAAAGGGTGCCTGGTCCGTGCTGAGTGCTGGAAGGGTTTaGCTTTATTGTTGCTGCCTCCATCTGTGTTGGGAGTTTGGGGTA +
Preference number: 1 (lower is better)
Translates to: EPPKGAWSVLSAGRV*LYCCCLHLCWEFGV
Trigger: TACCCCAAACTCCCAACACAGATGGAGGCAGCAACAATAAAGCCAAACCCTTCCAGCACTCAGCACGGACCAGGCACCCTTTGGGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
3UTR CAA 90 bp CGGGGTGTGCTGAGGAAGGCCTCGGGGCCCACGTGGCCGATGCGGTaGCCCTCGAGGTGCAGCTCCTCTAGGGCCTCAGGCAGGTCCGGG +
Preference number: 2 (lower is better)
Translates to: RGVLRKASGPTWPMR*PSRCSSSRASGRSG
Trigger: CCCGGACCTGCCTGAGGCCCTAGAGGAGCTGCACCTCGAGGGCAACCGCATCGGCCACGTGGGCCCCGAGGCCTTCCTCAGCACACCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR-3UTR TCA 90 bp GAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCGCAGGCGGGGTGTGCTaGGGAAGGCCTCGGGGCCCA +
Preference number: 2 (lower is better)
Translates to: EAQESQTKGPWWALSPQSAGGVC*GRPRGP
Trigger: TGGGCCCCGAGGCCTTCCTCAGCACACCCCGCCTGC...GGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR-3UTR CCA 90 bp GAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCTGCCCGTGGCCCACGTaGGGTGGTGGGAGGCAGCCG +
Preference number: 2 (lower is better)
Translates to: EAQESQTKGPWWALSPQSCPWPT*GGGRQP
Trigger: CGGCTGCCTCCCACCACCCCACGTGGGCCACGGGCA...GGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
3UTR CAA 90 bp GCCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTaGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGC +
Preference number: 2 (lower is better)
Translates to: ALEAQESQTKGPWWA*SPQSTAQRSPRSLS
Trigger: GCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000588872.2
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
3UTR-3UTR TCA 90 bp CCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTCACCCTCGGGGCACCTaGGGAAGAGGGCACGCAGGC +
Preference number: 2 (lower is better)
Translates to: PLVGVVSSVHGPAESQESHPRGT*GRGHAG
Trigger: GCCTGCGTGCCCTCTTCCTCAGGTGCCCCGAGGGTG...AGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR-3UTR CCA 90 bp GACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGCCTCGGGGCCCACGTaGCCGATGCGGTTGCCCTCG +
Preference number: 2 (lower is better)
Translates to: DLLRIPCRVHHTQVWEPQASGPT*PMRLPS
Trigger: CGAGGGCAACCGCATCGGCCACGTGGGCCCCGAGGC...CTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR-3UTR TCA 90 bp GGGAGGCAGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGACAGAGAGGCGGTCATaGCCCTCCCAGGCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: GRQPDQDLLRIPCRVHHTTERRS*PSQALP
Trigger: GGGGAGGGCCTGGGAGGGTCATGACCGCCTCTCTGT...CGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR-3UTR TCA 90 bp CCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGGCGATGCTCGTCATGTaGAGCCTGTTGGCCCTGCAC +
Preference number: 2 (lower is better)
Translates to: PRRARPRAPGGRCLLSPRAMLVM*SLLALH
Trigger: GTGCAGGGCCAACAGGCTTCACATGACGAGCATCGC...CCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR-3UTR GCA 90 bp GAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCGGCCTTGGGCGTCCCTaGAATCACACGTGGCTAGGT +
Preference number: 2 (lower is better)
Translates to: EAQESQTKGPWWALSPQSGLGRP*NHTWLG
Trigger: ACCTAGCCACGTGTGATTGCAGGGACGCCCAAGGCC...GGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
3UTR-3UTR CCA 90 bp CCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGTCTGAGCTGCTCTGCTaGGCCTCTCTAGGATCAGGG +
Preference number: 2 (lower is better)
Translates to: PRRARPRAPGGRCLLSPRSELLC*ASLGSG
Trigger: CCCTGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGA...CCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
3UTR-3UTR TCA 90 bp GACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGACAGCTCATTGTGGCTaGGGTCCAGCATCTGGGCAG +
Preference number: 2 (lower is better)
Translates to: DLLRIPCRVHHTQVWEPQTAHCG*GPASGQ
Trigger: CTGCCCAGATGCTGGACCTCAGCCACAATGAGCTGT...CTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR-3UTR GCA 90 bp AGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGCTAAAGCGATTCTCCTaGCTTGGCTCCCCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: SQTKGPWWALSPQSTAQRLKRFS*LGSPKC
Trigger: GCACTTTGGGGAGCCAAGGCAGGAGAATCGCTTTAG...CCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR-3UTR GCA 90 bp TCACCCTCGGGGCACCTGAGGAAGAGGGCACGCAGGCGGGGTGTGCTGAGGAAGCCGATCACGGCTCATTaGAGCCTCAAACTTCTGGGC +
Preference number: 2 (lower is better)
Translates to: SPSGHLRKRARRRGVLRKPITAH*SLKLLG
Trigger: GCCCAGAAGTTTGAGGCTGCAATGAGCCGTGATCGG...CTTCCTCAGCACACCCCGCCTGCGTGCCCTCTTCCTCAGGTGCCCCGAGGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR-3UTR CCA 90 bp TCACCCTCGGGGCACCTGAGGAAGAGGGCACGCAGGCGGGGTGTGCTGAGGAAGGCTGTGTTGCCAGGCTaGTCTCAAACCCATAGCCTA +
Preference number: 2 (lower is better)
Translates to: SPSGHLRKRARRRGVLRKAVLPG*SQTHSL
Trigger: TAGGCTATGGGTTTGAGACCAGCCTGGCAACACAGC...CTTCCTCAGCACACCCCGCCTGCGTGCCCTCTTCCTCAGGTGCCCCGAGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR-3UTR CCA 90 bp TGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGTTCAGTGGGTGGCCTTaGGCGTCCCTGCAATCACAC +
Preference number: 2 (lower is better)
Translates to: CSGFPAVSTTRRFGSPRKFSGWP*ASLQSH
Trigger: GTGTGATTGCAGGGACGCCCAAGGCCACCCACTGAA...CTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
3UTR-3UTR CCA 90 bp CCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCGTCCGTGCTGAGTGCTaGAAGGGTTTGGCTTTATTG +
Preference number: 2 (lower is better)
Translates to: PGEPDQGPLVGVVSSVHGVRAEC*KGLALL
Trigger: CAATAAAGCCAAACCCTTCCAGCACTCAGCACGGAC...GCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
3UTR-3UTR GCA 90 bp AGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTCTAAAGCGATTCTCCTaGCTTGGCTCCCCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: SRIRTCSGFPAVSTTRRFLKRFS*LGSPKC
Trigger: GCACTTTGGGGAGCCAAGGCAGGAGAATCGCTTTAG...AAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR CAA 90 bp GGGCGTCCCTGCAATCACACGTGGCTAGGTCGCACAGGGTGCTGTTaGGTGACCCCAGTGTGTGCCTCAAGACCTCAAAATTCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: GRPCNHTWLGRTGCC*VTPVCASRPQNSVL
Trigger: CAGGACTGAATTTTGAGGTCTTGAGGCACACACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGCCACGTGTGATTGCAGGGACGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
3UTR CAA 90 bp AGAGCCCCCAAAGGGTGCCTGGTCCGTGCTGAGTGCTGGAAGGGTTaGGCTTTATTGTTGCTGCCTCCATCTGTGTTGGGAGTTTGGGGT +
Preference number: 2 (lower is better)
Translates to: RAPKGCLVRAECWKG*ALLLLPPSVLGVWG
Trigger: ACCCCAAACTCCCAACACAGATGGAGGCAGCAACAATAAAGCCAAACCCTTCCAGCACTCAGCACGGACCAGGCACCCTTTGGGGGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
3UTR-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTAGGGTCTTGCTGTGTTaGCAGGCTGGTCTCAAACCC +
Preference number: 2 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLRVLLC*QAGLKP
Trigger: GGGTTTGAGACCAGCCTGGCAACACAGCAAGACCCT...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
3UTR-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGGGACTACAGGCATGTaGCACCACGCTTGGCTATGT +
Preference number: 2 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLGTTGM*HHAWLC
Trigger: ACATAGCCAAGCGTGGTGGCACATGCCTGTAGTCCC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
3UTR-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCTTGGCTCCCCAAAGTaGTGGGATTACAGGCATGAG +
Preference number: 2 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLLGSPK*WDYRHE
Trigger: CTCATGCCTGTAATCCCAGCACTTTGGGGAGCCAAG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
3UTR-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCTAAAGCGATTCTCCTaGCTTGGCTCCCCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLLKRFS*LGSPKC
Trigger: GCACTTTGGGGAGCCAAGGCAGGAGAATCGCTTTAG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
3UTR-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGCTGTGTTGCCAGGCTaGTCTCAAACCCATAGCCTA +
Preference number: 2 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLAVLPG*SQTHSL
Trigger: TAGGCTATGGGTTTGAGACCAGCCTGGCAACACAGC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
3UTR-3UTR TCA 90 bp AGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTAGACAGGTCCCCACTTaGTTAAATGAGTCAGTCATT +
Preference number: 2 (lower is better)
Translates to: SRIRTCSGFPAVSTTRRFRQVPT*LNESVI
Trigger: AATGACTGACTCATTTAATCAAGTGGGGACCTGTCT...AAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR CCA 72 bp GCCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTaGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGG +
Preference number: 3 (lower is better)
Translates to: ALEAQESQTKGP*WALSPQSTAQR
Trigger: CCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000588872.2
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
3UTR CCA 72 bp AGGCGGGGTGTGCTGAGGAAGGCCTCGGGGCCCACGTaGCCGATGCGGTTGCCCTCGAGGTGCAGCTCCTCT +
Preference number: 3 (lower is better)
Translates to: RRGVLRKASGPT*PMRLPSRCSSS
Trigger: AGAGGAGCTGCACCTCGAGGGCAACCGCATCGGCCACGTGGGCCCCGAGGCCTTCCTCAGCACACCCCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR CCA 72 bp TCTCTAGGATCAGGGGCCCCCTGCCCGTGGCCCACGTaGGGTGGTGGGAGGCAGCCGGATCAGGACCTGCTC +
Preference number: 3 (lower is better)
Translates to: SLGSGAPCPWPT*GGGRQPDQDLL
Trigger: GAGCAGGTCCTGATCCGGCTGCCTCCCACCACCCCACGTGGGCCACGGGCAGGGGGCCCCTGATCCTAGAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
3UTR-3UTR CAA 90 bp CCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGACGTGGCCGATGCGGTaGCCCTCGAGGTGCAGCTCC +
Preference number: 3 (lower is better)
Translates to: PRRARPRAPGGRCLLSPRTWPMR*PSRCSS
Trigger: GGAGCTGCACCTCGAGGGCAACCGCATCGGCCACGT...CCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR CCA 72 bp CTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTaGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGT +
Preference number: 3 (lower is better)
Translates to: LEAQESQTKGPW*ALSPQSTAQRS
Trigger: ACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000588872.2
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
3UTR-3UTR CAA 90 bp GACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGACGTGGCCGATGCGGTaGCCCTCGAGGTGCAGCTCC +
Preference number: 3 (lower is better)
Translates to: DLLRIPCRVHHTQVWEPQTWPMR*PSRCSS
Trigger: GGAGCTGCACCTCGAGGGCAACCGCATCGGCCACGT...CTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR GCA 72 bp GGGAGGCAGCCGGATCAGGACCTGCTCCGGATTCCCTaGCGTGTCCACCACACGCAGGTTTGGGAGCCCCAG +
Preference number: 3 (lower is better)
Translates to: GRQPDQDLLRIP*RVHHTQVWEPQ
Trigger: CTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
3UTR CCA 72 bp TGGCTGAGGTCCAGCATCTGGGCAGGGGGTTATAGATaGCATCGTGGCAGCCCCAGGCCTGGGCCACTCAGC +
Preference number: 3 (lower is better)
Translates to: WLRSSIWAGGYR*HRGSPRPGPLS
Trigger: GCTGAGTGGCCCAGGCCTGGGGCTGCCACGATGCCATCTATAACCCCCTGCCCAGATGCTGGACCTCAGCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR-3UTR CAA 90 bp CCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCATTTCAGTGGGTGGCCTaGGGCGTCCCTGCAATCACA +
Preference number: 3 (lower is better)
Translates to: PGGPGEPDQGPLVGVVSSFQWVA*GVPAIT
Trigger: TGTGATTGCAGGGACGCCCAAGGCCACCCACTGAAA...TGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
3UTR GCA 72 bp TGTGGGGAGGAGTCCGTGGACAGAGCCCCCAAAGGGTaGCTGGTCCGTGCTGAGTGCTGGAAGGGTTTGGCT +
Preference number: 3 (lower is better)
Translates to: CGEESVDRAPKG*LVRAECWKGLA
Trigger: AGCCAAACCCTTCCAGCACTCAGCACGGACCAGGCACCCTTTGGGGGCTCTGTCCACGGACTCCTCCCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
3UTR CCA 72 bp TCAGTGGGTGGCCTTGGGCGTCCCTGCAATCACACGTaGCTAGGTCGCACAGGGTGCTGTTTGGTGACCCCA +
Preference number: 3 (lower is better)
Translates to: SVGGLGRPCNHT*LGRTGCCLVTP
Trigger: TGGGGTCACCAAACAGCACCCTGTGCGACCTAGCCACGTGTGATTGCAGGGACGCCCAAGGCCACCCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
3UTR-3UTR CAA 90 bp GAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCGAGTGCTGGAAGGGTTaGGCTTTATTGTTGCTGCCT +
Preference number: 3 (lower is better)
Translates to: EAQESQTKGPWWALSPQSECWKG*ALLLLP
Trigger: AGGCAGCAACAATAAAGCCAAACCCTTCCAGCACTC...GGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587954.1
ENST00000588872.2
ENST00000672348.1
ENST00000672449.1
3UTR TCA 72 bp GCAGGTCCGGGGGCACAAAGGACAGCTCATTGTGGCTaGGGTCCAGCATCTGGGCAGGGGGTTATAGATGGC +
Preference number: 3 (lower is better)
Translates to: AGPGAQRTAHCG*GPASGQGVIDG
Trigger: GCCATCTATAACCCCCTGCCCAGATGCTGGACCTCAGCCACAATGAGCTGTCCTTTGTGCCCCCGGACCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR TCA 72 bp CGTGGACAGAGCCCCCAAAGGGTGCCTGGTCCGTGCTaGGTGCTGGAAGGGTTTGGCTTTATTGTTGCTGCC +
Preference number: 3 (lower is better)
Translates to: RGQSPQRVPGPC*VLEGFGFIVAA
Trigger: GGCAGCAACAATAAAGCCAAACCCTTCCAGCACTCAGCACGGACCAGGCACCCTTTGGGGGCTCTGTCCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
3UTR GCA 72 bp CGTCCCTGCAATCACACGTGGCTAGGTCGCACAGGGTaGTGTTTGGTGACCCCAGTGTGTGCCTCAAGACCT +
Preference number: 3 (lower is better)
Translates to: RPCNHTWLGRTG*CLVTPVCASRP
Trigger: AGGTCTTGAGGCACACACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGCCACGTGTGATTGCAGGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
3UTR CCA 72 bp GCTTTATTGTTGCTGCCTCCATCTGTGTTGGGAGTTTaGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCT +
Preference number: 3 (lower is better)
Translates to: ALLLLPPSVLGV*GRVCPARPAWS
Trigger: AGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCCCAACACAGATGGAGGCAGCAACAATAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000588872.2
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
3UTR GCA 72 bp GACAGAGCCCCCAAAGGGTGCCTGGTCCGTGCTGAGTaGTGGAAGGGTTTGGCTTTATTGTTGCTGCCTCCA +
Preference number: 3 (lower is better)
Translates to: DRAPKGCLVRAE*WKGLALLLLPP
Trigger: TGGAGGCAGCAACAATAAAGCCAAACCCTTCCAGCACTCAGCACGGACCAGGCACCCTTTGGGGGCTCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
3UTR CCA 72 bp AGGGTTTGGCTTTATTGTTGCTGCCTCCATCTGTGTTaGGAGTTTGGGGTAGGGTGTGTCCCGCCAGGCCGG +
Preference number: 3 (lower is better)
Translates to: RVWLYCCCLHLC*EFGVGCVPPGR
Trigger: CCGGCCTGGCGGGACACACCCTACCCCAAACTCCCAACACAGATGGAGGCAGCAACAATAAAGCCAAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000588872.2
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
3UTR CCA 72 bp AGAGCCCCCAAAGGGTGCCTGGTCCGTGCTGAGTGCTaGAAGGGTTTGGCTTTATTGTTGCTGCCTCCATCT +
Preference number: 3 (lower is better)
Translates to: RAPKGCLVRAEC*KGLALLLLPPS
Trigger: AGATGGAGGCAGCAACAATAAAGCCAAACCCTTCCAGCACTCAGCACGGACCAGGCACCCTTTGGGGGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
3UTR GCA 72 bp TCCGTGCTGAGTGCTGGAAGGGTTTGGCTTTATTGTTaGTGCCTCCATCTGTGTTGGGAGTTTGGGGTAGGG +
Preference number: 3 (lower is better)
Translates to: SVLSAGRVWLYC*CLHLCWEFGVG
Trigger: CCCTACCCCAAACTCCCAACACAGATGGAGGCAGCAACAATAAAGCCAAACCCTTCCAGCACTCAGCACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000587954.1
ENST00000588872.2
ENST00000672348.1
ENST00000672449.1
CDS-3UTR TCA 90 bp CCCTCGGGGCACCTGAGGAAGAGGGCACGCAGGCGGGGTGTGCTGAGGAAGGCCGCAGGCGGGGTGTGCTaGGGAAGGCCTCGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: PSGHLRKRARRRGVLRKAAGGVC*GRPRGP
Trigger: TGGGCCCCGAGGCCTTCCTCAGCACACCCCGCCTGC...GGCCTTCCTCAGCACACCCCGCCTGCGTGCCCTCTTCCTCAGGTGCCCCGAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR TCA 90 bp GCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGACCCGGCGGGCAGCCCTaGGCTCCCCAGCTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: ARPRAPGGRCLLSPRPSGPGGQP*APQLVV
Trigger: CACAACCAGCTGGGGAGCTCAGGGCTGCCCGCCGGG...TCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR TCA 90 bp AAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGGCAGGCGGGGTGTGCTaGGGAAGGCCTCGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: KGPWWALSPQSTAQRSPRAGGVC*GRPRGP
Trigger: TGGGCCCCGAGGCCTTCCTCAGCACACCCCGCCTGC...CCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp CCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCCGGAAGGCCCGGTGGTaGACACGGGCGCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PWRPRRARPRAPGGRCLLRKARW*TRALAR
Trigger: CCTGGCCAGCGCCCGTGTGCACCACCGGGCCTTCCG...GAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp TCTGAGCTGCTCTGCTGGGCCTCTCTAGGATCAGGGGCCCCCTGCCCGTGGCCCGCCTCGGGGCCCACGTaGCCGATGCGGTTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: SELLCWASLGSGAPCPWPASGPT*PMRLPS
Trigger: CGAGGGCAACCGCATCGGCCACGTGGGCCCCGAGGC...GGGCCACGGGCAGGGGGCCCCTGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR TCA 90 bp GTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGGTGGAGCCGCTCGAGTaGGGGCGGCAGGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: VGVVSSVHGPAESQESELVEPLE*GRQAGR
Trigger: CCGCCCAGCCTGCCGCCCTCACTCGAGCGGCTCCAC...CAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR TCA 90 bp GGAGTTTGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGGCAGGCGGGGTGTGCTaGGGAAGGCCTCGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GVWGRVCPARPAWSVSLEAGGVC*GRPRGP
Trigger: TGGGCCCCGAGGCCTTCCTCAGCACACCCCGCCTGC...CTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR TCA 90 bp AGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGCACCCTCGGGGCACCTaGGGAAGAGGGCACGCAGGC +
Preference number: 4 (lower is better)
Translates to: SQTKGPWWALSPQSTAQRHPRGT*GRGHAG
Trigger: GCCTGCGTGCCCTCTTCCTCAGGTGCCCCGAGGGTG...CCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR GCA 90 bp CCCTCGGGGCACCTGAGGAAGAGGGCACGCAGGCGGGGTGTGCTGAGGAAGGCCCGGTTGCGGCCCAGGTaGAGGATAGCCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: PSGHLRKRARRRGVLRKARLRPR*RIARVR
Trigger: CCGGACCCTGGCTATCCTGCACCTGGGCCGCAACCG...GGCCTTCCTCAGCACACCCCGCCTGCGTGCCCTCTTCCTCAGGTGCCCCGAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp GCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGCGAGCCGCCTCCACCTaGCGGATGCGGTTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: AQESQTKGPWWALSPQSTRAAST*RMRLRP
Trigger: GGGCCGCAACCGCATCCGGCAGGTGGAGGCGGCTCG...CGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GGAGTTTGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGAGACCACGCGCCCCGTaGAGCCGAGCCGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: GVWGRVCPARPAWSVSLERPRAP*SRAAST
Trigger: GGTGGAGGCGGCTCGGCTGCACGGGGCGCGTGGTCT...CTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGACTGCCAGGTCGAGGCTaGGCAGGGCACGCAACCGGC +
Preference number: 4 (lower is better)
Translates to: ARPRAPGGRCLLSPRPSGLPGRG*AGHATG
Trigger: GCCGGTTGCGTGCCCTGCGCAGCCTCGACCTGGCAG...TCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp CAGCCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCACCCGGAGCCGGTTGTaGGCCAGGCTGAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: QPWRPRRARPRAPGGRCLTRSRL*ARLSSR
Trigger: GCGGGAGCTCAGCCTGGCGCACAACCGGCTCCGGGT...GAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp AGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGACCCGGAGCCGGTTGTaGGCCAGGCTGAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SQTKGPWWALSPQSTAQRTRSRL*ARLSSR
Trigger: GCGGGAGCTCAGCCTGGCGCACAACCGGCTCCGGGT...CCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp AGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGGCGGCCACGTGGTTGTaGGGCAGCACCAGGGCACGC +
Preference number: 4 (lower is better)
Translates to: SQTKGPWWALSPQSTAQRAATWL*GSTRAR
Trigger: GCGTGCCCTGGTGCTGCCCCACAACCACGTGGCCGC...CCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCCCCAGCGCGGCCACGTaGTTGTGGGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: PWRPRRARPRAPGGRCLLPSAAT*LWGSTR
Trigger: CCTGGTGCTGCCCCACAACCACGTGGCCGCGCTGGG...GAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp AGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCTGCCCGTGGCCCACGTaGGGTGGTGGGAGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: RRARPRAPGGRCLLSPRPCPWPT*GGGRQP
Trigger: CGGCTGCCTCCCACCACCCCACGTGGGCCACGGGCA...GGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTTGCCCGTGGCCCACGTaGGGTGGTGGGAGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PLVGVVSSVHGPAESQESCPWPT*GGGRQP
Trigger: CGGCTGCCTCCCACCACCCCACGTGGGCCACGGGCA...AGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp TGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCTGCCCGTGGCCCACGTaGGGTGGTGGGAGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: WGRVCPARPAWSVSLEYACPWPT*GGGRQP
Trigger: CGGCTGCCTCCCACCACCCCACGTGGGCCACGGGCA...GGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
3UTR CAA 72 bp CTGAGGAAGGCCTCGGGGCCCACGTGGCCGATGCGGTaGCCCTCGAGGTGCAGCTCCTCTAGGGCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LRKASGPTWPMR*PSRCSSSRASG
Trigger: GCCTGAGGCCCTAGAGGAGCTGCACCTCGAGGGCAACCGCATCGGCCACGTGGGCCCCGAGGCCTTCCTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
3UTR CAA 72 bp GCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTaGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: AQESQTKGPWWA*SPQSTAQRSPR
Trigger: CCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000588872.2
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR TCA 90 bp AGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCAGCAGGCGGGGTGTGCTaGGGAAGGCCTCGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RPRRARPRAPGGRCLLSPAGGVC*GRPRGP
Trigger: TGGGCCCCGAGGCCTTCCTCAGCACACCCCGCCTGC...TGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR TCA 90 bp GTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGGCAGGCGGGGTGTGCTaGGGAAGGCCTCGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: VGVVSSVHGPAESQESELAGGVC*GRPRGP
Trigger: TGGGCCCCGAGGCCTTCCTCAGCACACCCCGCCTGC...CAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR TCA 90 bp CCTCGGGGCCCACGTGGCCGATGCGGTTGCCCTCGAGGTGCAGCTCCTCTAGGGGGCCGGCGTGGTCTGTaGGCCTGGAGTATGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PRGPRGRCGCPRGAAPLGGRRGL*AWSMPA
Trigger: AGCTGGCATACTCCAGGCTCACAGACCACGCCGGCC...CCCTAGAGGAGCTGCACCTCGAGGGCAACCGCATCGGCCACGTGGGCCCCGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp CCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCACGGTTGCGGCCCAGGTaGAGGATAGCCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: PRAPGGRCLLSPRPSGVPRLRPR*RIARVR
Trigger: CCGGACCCTGGCTATCCTGCACCTGGGCCGCAACCG...TGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCAGCTGTGTGCGAGCCGCCTCCACCTaGCGGATGCGGTTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: VCPARPAWSVSLEYASCVRAAST*RMRLRP
Trigger: GGGCCGCAACCGCATCCGGCAGGTGGAGGCGGCTCG...CACACAGCTGGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp AGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGAAGGCCCGGTGGTaGACACGGGCGCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RPRRARPRAPGGRCLLSPRKARW*TRALAR
Trigger: CCTGGCCAGCGCCCGTGTGCACCACCGGGCCTTCCG...TGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCAGCTGTGTGCGGAAGGCCCGGTGGTaGACACGGGCGCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VCPARPAWSVSLEYASCVRKARW*TRALAR
Trigger: CCTGGCCAGCGCCCGTGTGCACCACCGGGCCTTCCG...CACACAGCTGGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GGCAGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGCTGCCAGGTCGAGGCTaGGCAGGGCACGCAACCGGC +
Preference number: 4 (lower is better)
Translates to: GSRIRTCSGFPAVSTTRRLPGRG*AGHATG
Trigger: GCCGGTTGCGTGCCCTGCGCAGCCTCGACCTGGCAG...CCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp CAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCACCCGGAGCCGGTTGTaGGCCAGGCTGAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: QESQTKGPWWALSPQSTATRSRL*ARLSSR
Trigger: GCGGGAGCTCAGCCTGGCGCACAACCGGCTCCGGGT...GGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACCCGGAGCCGGTTGTaGGCCAGGCTGAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: EAQESQTKGPWWALSPQSTRSRL*ARLSSR
Trigger: GCGGGAGCTCAGCCTGGCGCACAACCGGCTCCGGGT...GGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp CAGCCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCACCTCCTGGAGCCTCTaGTGTGGCCACCACCGCCCC +
Preference number: 4 (lower is better)
Translates to: QPWRPRRARPRAPGGRCLTSWSL*CGHHRP
Trigger: GGGGCGGTGGTGGCCACAGCAGAGGCTCCAGGAGGT...GAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR GCA 90 bp CCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCGGCCCACGTGGCCGATaGGGTTGCCCTCGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: PWRPRRARPRAPGGRCLLGPRGR*GCPRGA
Trigger: TGCACCTCGAGGGCAACCGCATCGGCCACGTGGGCC...GAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp AGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGGGCCCACGTGGCCGATaGGGTTGCCCTCGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: SQTKGPWWALSPQSTAQRGPRGR*GCPRGA
Trigger: TGCACCTCGAGGGCAACCGCATCGGCCACGTGGGCC...CCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp GGAGTTTGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGGCGGCCACGTGGTTGTaGGGCAGCACCAGGGCACGC +
Preference number: 4 (lower is better)
Translates to: GVWGRVCPARPAWSVSLEAATWL*GSTRAR
Trigger: GCGTGCCCTGGTGCTGCCCCACAACCACGTGGCCGC...CTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTCCCAGCGCGGCCACGTaGTTGTGGGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: PLVGVVSSVHGPAESQESPSAAT*LWGSTR
Trigger: CCTGGTGCTGCCCCACAACCACGTGGCCGCGCTGGG...AGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTCCGTCAGGCCCGGTGTaGCGACCAGGTCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: PLVGVVSSVHGPAESQESPSGPV*RPGHGH
Trigger: GTGCCCGTGACCTGGTCGCCACACCGGGCCTGACGG...AGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp AGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGCTGAGCTCCCGCAGTTaGTCCAGGCCGGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SQTKGPWWALSPQSTAQRLSSRS*SRPARG
Trigger: GCCTCTGGCCGGCCTGGACCAACTGCGGGAGCTCAG...CCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCACTGAGCTCCCGCAGTTaGTCCAGGCCGGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PRAPGGRCLLSPRPSGVPLSSRS*SRPARG
Trigger: GCCTCTGGCCGGCCTGGACCAACTGCGGGAGCTCAG...TGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCCTCATGCCAGGTGCCTaGCCCGATGTCGCCGACCCG +
Preference number: 4 (lower is better)
Translates to: PWRPRRARPRAPGGRCLLLMPGA*PDVADP
Trigger: CGGGTCGGCGACATCGGGCCAGGCACCTGGCATGAG...GAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp TCTGAGCTGCTCTGCTGGGCCTCTCTAGGATCAGGGGCCCCCTGCCCGTGGCCCCTCATGCCAGGTGCCTaGCCCGATGTCGCCGACCCG +
Preference number: 4 (lower is better)
Translates to: SELLCWASLGSGAPCPWPLMPGA*PDVADP
Trigger: CGGGTCGGCGACATCGGGCCAGGCACCTGGCATGAG...GGGCCACGGGCAGGGGGCCCCTGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR CCA 90 bp GCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGACTCATGCCAGGTGCCTaGCCCGATGTCGCCGACCCG +
Preference number: 4 (lower is better)
Translates to: ARPRAPGGRCLLSPRPSGLMPGA*PDVADP
Trigger: CGGGTCGGCGACATCGGGCCAGGCACCTGGCATGAG...TCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp GTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGGCCTCGGGGCCCACGTaGCCGATGCGGTTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: VGVVSSVHGPAESQESELASGPT*PMRLPS
Trigger: CGAGGGCAACCGCATCGGCCACGTGGGCCCCGAGGC...CAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGCCCACGTGGGGTGGTaGGAGGCAGCCGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: PRAPGGRCLLSPRPSGVPAHVGW*EAAGSG
Trigger: TCCTGATCCGGCTGCCTCCCACCACCCCACGTGGGC...TGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp GCAGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTGCCCGTGGCCCACGTaGGGTGGTGGGAGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: AAGSGPAPDSLPCPPHAGCPWPT*GGGRQP
Trigger: CGGCTGCCTCCCACCACCCCACGTGGGCCACGGGCA...ACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR CCA 90 bp GACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGTGCCCGTGGCCCACGTaGGGTGGTGGGAGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: DLLRIPCRVHHTQVWEPQCPWPT*GGGRQP
Trigger: CGGCTGCCTCCCACCACCCCACGTGGGCCACGGGCA...CTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR TCA 90 bp GTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTCTGCCCCGGCGGGCAGCCCTaGGCTCCCCAGCTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: VVSSVHGPAESQESELLCPGGQP*APQLVV
Trigger: CACAACCAGCTGGGGAGCTCAGGGCTGCCCGCCGGG...GCAGAGCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR TCA 90 bp CTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGGCCACCCTCGGGGCACCTaGGGAAGAGGGCACGCAGGC +
Preference number: 4 (lower is better)
Translates to: LRIPCRVHHTQVWEPQEGHPRGT*GRGHAG
Trigger: GCCTGCGTGCCCTCTTCCTCAGGTGCCCCGAGGGTG...GCCTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR TCA 90 bp AGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACACCCTCGGGGCACCTaGGGAAGAGGGCACGCAGGC +
Preference number: 4 (lower is better)
Translates to: RPRRARPRAPGGRCLLSPHPRGT*GRGHAG
Trigger: GCCTGCGTGCCCTCTTCCTCAGGTGCCCCGAGGGTG...TGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR TCA 90 bp GACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGCACCCTCGGGGCACCTaGGGAAGAGGGCACGCAGGC +
Preference number: 4 (lower is better)
Translates to: DLLRIPCRVHHTQVWEPQHPRGT*GRGHAG
Trigger: GCCTGCGTGCCCTCTTCCTCAGGTGCCCCGAGGGTG...CTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR TCA 90 bp GGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAACAGAGAGGCGGTCATaGCCCTCCCAGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GEPDQGPLVGVVSSVHGPTERRS*PSQALP
Trigger: GGGGAGGGCCTGGGAGGGTCATGACCGCCTCTCTGT...TGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR TCA 90 bp AGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCACAGAGAGGCGGTCATaGCCCTCCCAGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RARPRAPGGRCLLSPRPSTERRS*PSQALP
Trigger: GGGGAGGGCCTGGGAGGGTCATGACCGCCTCTCTGT...GCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR TCA 90 bp AGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGGGCCGGCGTGGTCTGTaGGCCTGGAGTATGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SQTKGPWWALSPQSTAQRGRRGL*AWSMPA
Trigger: AGCTGGCATACTCCAGGCTCACAGACCACGCCGGCC...CCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCCGGTTGCGGCCCAGGTaGAGGATAGCCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: EAQESQTKGPWWALSPQSRLRPR*RIARVR
Trigger: CCGGACCCTGGCTATCCTGCACCTGGGCCGCAACCG...GGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp AGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCCCTCCACCTGCCGGATaGGGTTGCGGCCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: RRARPRAPGGRCLLSPRPPPPAG*GCGPGA
Trigger: TGCACCTGGGCCGCAACCGCATCCGGCAGGTGGAGG...GGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCCTCCACCTGCCGGATaGGGTTGCGGCCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: GGPGEPDQGPLVGVVSSVPPPAG*GCGPGA
Trigger: TGCACCTGGGCCGCAACCGCATCCGGCAGGTGGAGG...GACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp TGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGCGAGCCGCCTCCACCTaGCGGATGCGGTTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: CSGFPAVSTTRRFGSPRKRAAST*RMRLRP
Trigger: GGGCCGCAACCGCATCCGGCAGGTGGAGGCGGCTCG...CTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp TGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGAGACCACGCGCCCCGTaGAGCCGAGCCGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: CSGFPAVSTTRRFGSPRKRPRAP*SRAAST
Trigger: GGTGGAGGCGGCTCGGCTGCACGGGGCGCGTGGTCT...CTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp GTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTCTGCAGACCACGCGCCCCGTaGAGCCGAGCCGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: VVSSVHGPAESQESELLCRPRAP*SRAAST
Trigger: GGTGGAGGCGGCTCGGCTGCACGGGGCGCGTGGTCT...GCAGAGCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp AGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCAGCTGTCTGCCAGGTCGAGGCTaGGCAGGGCACGCAACCGGC +
Preference number: 4 (lower is better)
Translates to: RVCPARPAWSVSLEYASCLPGRG*AGHATG
Trigger: GCCGGTTGCGTGCCCTGCGCAGCCTCGACCTGGCAG...ACAGCTGGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp CCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCACGCAGCTGGTTGCGTTaGAGCTGCAGGGTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PRAPGGRCLLSPRPSGVPRSWLR*SCRVRR
Trigger: CCTGCGCACCCTGCAGCTGCAACGCAACCAGCTGCG...TGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GCAGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTACCCGGAGCCGGTTGTaGGCCAGGCTGAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: AAGSGPAPDSLPCPPHAGTRSRL*ARLSSR
Trigger: GCGGGAGCTCAGCCTGGCGCACAACCGGCTCCGGGT...ACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR GCA 90 bp AAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGGCCACGCAGAGGTGCTaGAGCTGGGTGAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: KGPWWALSPQSTAQRSPRATQRC*SWVRDS
Trigger: CGAGTCCCTCACCCAGCTGCAGCACCTCTGCGTGGC...CCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGACGTGGCCGATGCGGTTaGCCTCGAGGTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ARPRAPGGRCLLSPRPSGRGRCG*PRGAAP
Trigger: AGGAGCTGCACCTCGAGGGCAACCGCATCGGCCACG...TCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp TGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCGGCCCACGTGGCCGATaGGGTTGCCCTCGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: WGRVCPARPAWSVSLEYAGPRGR*GCPRGA
Trigger: TGCACCTCGAGGGCAACCGCATCGGCCACGTGGGCC...GGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp TGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCCCCAGCGCGGCCACGTaGTTGTGGGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: WWALSPQSTAQRSPRSLSPSAAT*LWGSTR
Trigger: CCTGGTGCTGCCCCACAACCACGTGGCCGCGCTGGG...GCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp GTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCCGTCAGGCCCGGTGTaGCGACCAGGTCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: VGVVSSVHGPAESQESELPSGPV*RPGHGH
Trigger: GTGCCCGTGACCTGGTCGCCACACCGGGCCTGACGG...CAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGTGCACACGGGCGCTaGCCAGGCGGTTATAGGCCA +
Preference number: 4 (lower is better)
Translates to: PRAPGGRCLLSPRPSGVPGAHGR*PGGYRP
Trigger: TGGCCTATAACCGCCTGGCCAGCGCCCGTGTGCACC...TGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp TCACCCTCGGGGCACCTGAGGAAGAGGGCACGCAGGCGGGGTGTGCTGAGGAAGCTGAGCTCCCGCAGTTaGTCCAGGCCGGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SPSGHLRKRARRRGVLRKLSSRS*SRPARG
Trigger: GCCTCTGGCCGGCCTGGACCAACTGCGGGAGCTCAG...CTTCCTCAGCACACCCCGCCTGCGTGCCCTCTTCCTCAGGTGCCCCGAGGGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp CCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCTGAGCTCCCGCAGTTaGTCCAGGCCGGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: PGEPDQGPLVGVVSSVHGLSSRS*SRPARG
Trigger: GCCTCTGGCCGGCCTGGACCAACTGCGGGAGCTCAG...GCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCTCATGCCAGGTGCCTaGCCCGATGTCGCCGACCCG +
Preference number: 4 (lower is better)
Translates to: PRRARPRAPGGRCLLSPRLMPGA*PDVADP
Trigger: CGGGTCGGCGACATCGGGCCAGGCACCTGGCATGAG...CCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp GAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCCTCATGCCAGGTGCCTaGCCCGATGTCGCCGACCCG +
Preference number: 4 (lower is better)
Translates to: EAQESQTKGPWWALSPQSLMPGA*PDVADP
Trigger: CGGGTCGGCGACATCGGGCCAGGCACCTGGCATGAG...GGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CAGCCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTGTGTCTCGGCCAGTaGCAGGCAGAGCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QPWRPRRARPRAPGGRCLLCLGQ*QAEQAQ
Trigger: CTGGGCCTGCTCTGCCTGCCACTGGCCGAGACACAG...GAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp AAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGCTGTGTCTCGGCCAGTaGCAGGCAGAGCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: KGPWWALSPQSTAQRSPRLCLGQ*QAEQAQ
Trigger: CTGGGCCTGCTCTGCCTGCCACTGGCCGAGACACAG...CCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp TCTGAGCTGCTCTGCTGGGCCTCTCTAGGATCAGGGGCCCCCTGCCCGTGGCCCCTGTGTCTCGGCCAGTaGCAGGCAGAGCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SELLCWASLGSGAPCPWPLCLGQ*QAEQAQ
Trigger: CTGGGCCTGCTCTGCCTGCCACTGGCCGAGACACAG...GGGCCACGGGCAGGGGGCCCCTGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR CCA 90 bp AAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGCCCGCCAGGCCGGCGTaGTCTGTGAGCCTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: KGPWWALSPQSTAQRSPRPARPA*SVSLEY
Trigger: ATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGG...CCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp AGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGCCCGCCAGGCCGGCGTaGTCTGTGAGCCTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: SQTKGPWWALSPQSTAQRPARPA*SVSLEY
Trigger: ATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGG...CCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR TCA 90 bp CAGCCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCGGAGGTACACGGACCTaGGTGCCGGCTTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: QPWRPRRARPRAPGGRCLGGTRT*VPASPQ
Trigger: TTGGGGAGAAGCCGGCACTCAGGTCCGTGTACCTCC...GAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR TCA 90 bp AGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTCCCGGCGGGCAGCCCTaGGCTCCCCAGCTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: SRIRTCSGFPAVSTTRRFPGGQP*APQLVV
Trigger: CACAACCAGCTGGGGAGCTCAGGGCTGCCCGCCGGG...AAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR TCA 90 bp GGAGTTTGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGGGCAGCCGGGTTAGCTaGTTCCCTGCCAGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: GVWGRVCPARPAWSVSLEGSRVS*FPARSR
Trigger: CCTCGACCTGGCAGGGAATCAGCTAACCCGGCTGCC...CTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR TCA 90 bp GGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGTTGTGCGCCAGGCTaGGCTCCCGCAGTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GPGEPDQGPLVGVVSSVHGCAPG*APAVGP
Trigger: TGGACCAACTGCGGGAGCTCAGCCTGGCGCACAACC...GTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR TCA 90 bp GAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCGGTTGTGCGCCAGGCTaGGCTCCCGCAGTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: EAQESQTKGPWWALSPQSGCAPG*APAVGP
Trigger: TGGACCAACTGCGGGAGCTCAGCCTGGCGCACAACC...GGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR TCA 90 bp GGAGTTTGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGGGTTGTGCGCCAGGCTaGGCTCCCGCAGTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GVWGRVCPARPAWSVSLEGCAPG*APAVGP
Trigger: TGGACCAACTGCGGGAGCTCAGCCTGGCGCACAACC...CTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR TCA 90 bp GGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGTGCTGCAGCTGGGTaGGGGACTCGAAGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: GPGEPDQGPLVGVVSSVHGAAAG*GTRRPR
Trigger: ACGAGGCCTTCGAGTCCCTCACCCAGCTGCAGCACC...GTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR TCA 90 bp GAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCGGTGCTGCAGCTGGGTaGGGGACTCGAAGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: EAQESQTKGPWWALSPQSGAAAG*GTRRPR
Trigger: ACGAGGCCTTCGAGTCCCTCACCCAGCTGCAGCACC...GGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR TCA 90 bp CCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGGTGCTGCAGCTGGGTaGGGGACTCGAAGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: PGGPGEPDQGPLVGVVSSGAAAG*GTRRPR
Trigger: ACGAGGCCTTCGAGTCCCTCACCCAGCTGCAGCACC...TGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR TCA 90 bp AGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGGACCGGGGCAGAAACTaGGGGGCCACTGAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SQTKGPWWALSPQSTAQRDRGRN*GATESL
Trigger: CAAGCTCTCAGTGGCCCCTCAGTTTCTGCCCCGGTC...CCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR TCA 90 bp CTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGGCACAGAGAGGCGGTCATaGCCCTCCCAGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LRIPCRVHHTQVWEPQEGTERRS*PSQALP
Trigger: GGGGAGGGCCTGGGAGGGTCATGACCGCCTCTCTGT...GCCTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR TCA 90 bp GCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTGCCTGGTCCGTGCTaGGTGCTGGAAGGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: ARPRAPGGRCLLSPRPSGVPGPC*VLEGFG
Trigger: GCCAAACCCTTCCAGCACTCAGCACGGACCAGGCAC...TCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR GCA 90 bp TGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCCGCAGCTGGTTGCGTTaGAGCTGCAGGGTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: WGRVCPARPAWSVSLEYARSWLR*SCRVRR
Trigger: CCTGCGCACCCTGCAGCTGCAACGCAACCAGCTGCG...GGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACCGCAGCTGGTTGCGTTaGAGCTGCAGGGTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GPGEPDQGPLVGVVSSVHRSWLR*SCRVRR
Trigger: CCTGCGCACCCTGCAGCTGCAACGCAACCAGCTGCG...GTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp CAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCGGAGCTCATGCCAGGTaGCTGGCCCGATGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: QESQTKGPWWALSPQSTAGAHAR*LARCRR
Trigger: TCGGCGACATCGGGCCAGGCACCTGGCATGAGCTCC...GGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp AGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGCTCATGCCAGGTaGCTGGCCCGATGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: RARPRAPGGRCLLSPRPSGAHAR*LARCRR
Trigger: TCGGCGACATCGGGCCAGGCACCTGGCATGAGCTCC...GCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp CCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGGAGCTCATGCCAGGTaGCTGGCCCGATGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: PGGPGEPDQGPLVGVVSSGAHAR*LARCRR
Trigger: TCGGCGACATCGGGCCAGGCACCTGGCATGAGCTCC...TGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp CAGCCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCGGTTGCCCTCGAGGTaGAGCTCCTCTAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: QPWRPRRARPRAPGGRCLRLPSR*SSSRAS
Trigger: TGAGGCCCTAGAGGAGCTGCACCTCGAGGGCAACCG...GAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGACGGTTGCCCTCGAGGTaGAGCTCCTCTAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: ARPRAPGGRCLLSPRPSGRLPSR*SSSRAS
Trigger: TGAGGCCCTAGAGGAGCTGCACCTCGAGGGCAACCG...TCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp CCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCACGTGGCCGATGCGGTTaGCCTCGAGGTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PGGPGEPDQGPLVGVVSSRGRCG*PRGAAP
Trigger: AGGAGCTGCACCTCGAGGGCAACCGCATCGGCCACG...TGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCAGCTGTGTGGGCCCACGTGGCCGATaGGGTTGCCCTCGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: VCPARPAWSVSLEYASCVGPRGR*GCPRGA
Trigger: TGCACCTCGAGGGCAACCGCATCGGCCACGTGGGCC...CACACAGCTGGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp CAGCCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCAGCCGGATCAGGACCTaGTCCGGATTCCCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: QPWRPRRARPRAPGGRCLSRIRT*SGFPAV
Trigger: CACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCT...GAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp AAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGCCGGATCAGGACCTaGTCCGGATTCCCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: KGPWWALSPQSTAQRSPRSRIRT*SGFPAV
Trigger: CACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCT...CCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CAGCCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCAGTGGGCAGGCCCATaGGCAGCCGGGTTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: QPWRPRRARPRAPGGRCLQWAGP*AAGLAD
Trigger: ATCAGCTAACCCGGCTGCCCATGGGCCTGCCCACTG...GAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp TGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCCTGAGCTCCCGCAGTTaGTCCAGGCCGGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: WALSPQSTAQRSPRSLSCLSSRS*SRPARG
Trigger: GCCTCTGGCCGGCCTGGACCAACTGCGGGAGCTCAG...GCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp TCTGAGCTGCTCTGCTGGGCCTCTCTAGGATCAGGGGCCCCCTGCCCGTGGCCCGCCCTGGGGACAGTGTaGCTAACCAGCCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SELLCWASLGSGAPCPWPALGTV*LTSLCL
Trigger: CAGGCACAGGCTGGTTAGCCACACTGTCCCCAGGGC...GGGCCACGGGCAGGGGGCCCCTGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp CCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCACAGGCGGTCACCTCCTaGAGCCTCTGCTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: PGGPGEPDQGPLVGVVSSQAVTS*SLCCGH
Trigger: GTGGCCACAGCAGAGGCTCCAGGAGGTGACCGCCTG...TGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR CCA 90 bp GGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCGCAGGCTCGGCCACATaGCCAGCCCTGACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GGPGEPDQGPLVGVVSSVAGSAT*PALTLP
Trigger: TGGCAGAGTCAGGGCTGGCCATGTGGCCGAGCCTGC...GACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR CCA 90 bp AAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGCAGAGGTGCTGCAGCTaGGTGAGGGACTCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: KGPWWALSPQSTAQRSPRQRCCS*VRDSKA
Trigger: GGCCTTCGAGTCCCTCACCCAGCTGCAGCACCTCTG...CCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp AAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGGGCTCGGCCACTGGGTaGGCCTCCCCATTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: KGPWWALSPQSTAQRSPRGSATG*ASPLKV
Trigger: CACTTTCAATGGGGAGGCCCACCCAGTGGCCGAGCC...CCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp GATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGGCCTCGGGGCCCACGTaGCCGATGCGGTTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: DQDLLRIPCRVHHTQVWEASGPT*PMRLPS
Trigger: CGAGGGCAACCGCATCGGCCACGTGGGCCCCGAGGC...CTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR CCA 90 bp GACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGCCCACGTGGGGTGGTaGGAGGCAGCCGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: DLLRIPCRVHHTQVWEPQAHVGW*EAAGSG
Trigger: TCCTGATCCGGCTGCCTCCCACCACCCCACGTGGGC...CTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR CCA 90 bp GCAGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTGCCCACGTGGGGTGGTaGGAGGCAGCCGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: AAGSGPAPDSLPCPPHAGAHVGW*EAAGSG
Trigger: TCCTGATCCGGCTGCCTCCCACCACCCCACGTGGGC...ACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR CCA 90 bp GTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCAGCTGTGTGGCCCACGTGGGGTGGTaGGAGGCAGCCGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: VCPARPAWSVSLEYASCVAHVGW*EAAGSG
Trigger: TCCTGATCCGGCTGCCTCCCACCACCCCACGTGGGC...CACACAGCTGGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCACCAAGGGCCCCTGGTaGGCGTTGTCTCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: PWRPRRARPRAPGGRCLLTKGPW*ALSPQS
Trigger: GGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGT...GAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCCAGACCAAGGGCCCCTaGTGGGCGTTGTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PWRPRRARPRAPGGRCLLQTKGP*WALSPQ
Trigger: CTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTG...GAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp AGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCCTGTGTCTCGGCCAGTaGCAGGCAGAGCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RARPRAPGGRCLLSPRPSLCLGQ*QAEQAQ
Trigger: CTGGGCCTGCTCTGCCTGCCACTGGCCGAGACACAG...GCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp GGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCACCCGCCAGGCCGGCGTaGTCTGTGAGCCTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: GEPDQGPLVGVVSSVHGPPARPA*SVSLEY
Trigger: ATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGG...TGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp AAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGGTGGGGAGGAGTCCGTaGACAGAGCCCCCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: KGPWWALSPQSTAQRSPRVGRSP*TEPPKG
Trigger: ACCCTTTGGGGGCTCTGTCCACGGACTCCTCCCCAC...CCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR TCA 90 bp GGCAGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGGGGTTCGCAGGCCACTaGGGCGGGACAGCTCATTGT +
Preference number: 4 (lower is better)
Translates to: GSRIRTCSGFPAVSTTRRGFAGH*GGTAHC
Trigger: ACAATGAGCTGTCCCGCCTCAGTGGCCTGCGAACCC...CCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR TCA 90 bp GGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGGGTTCGCAGGCCACTaGGGCGGGACAGCTCATTGT +
Preference number: 4 (lower is better)
Translates to: GEPDQGPLVGVVSSVHGPGFAGH*GGTAHC
Trigger: ACAATGAGCTGTCCCGCCTCAGTGGCCTGCGAACCC...TGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR TCA 90 bp CCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCGGCTATGCAGCTTGCTaGAGGTGGTGGCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: PWRPRRARPRAPGGRCLLGYAAC*RWWHPG
Trigger: GCCTGGATGCCACCACCTTCAGCAAGCTGCATAGCC...GAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR TCA 90 bp AGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCAGGCAGCCGGGTTAGCTaGTTCCCTGCCAGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: RPRRARPRAPGGRCLLSPGSRVS*FPARSR
Trigger: CCTCGACCTGGCAGGGAATCAGCTAACCCGGCTGCC...TGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR TCA 90 bp AGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCAGCTGTGGCAGCCGGGTTAGCTaGTTCCCTGCCAGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: RVCPARPAWSVSLEYASCGSRVS*FPARSR
Trigger: CCTCGACCTGGCAGGGAATCAGCTAACCCGGCTGCC...ACAGCTGGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR TCA 90 bp TGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCGGTTGTGCGCCAGGCTaGGCTCCCGCAGTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: WWALSPQSTAQRSPRSLSGCAPG*APAVGP
Trigger: TGGACCAACTGCGGGAGCTCAGCCTGGCGCACAACC...GCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR TCA 90 bp TGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCGGTGGGCCTCCCCATTaGAAGTGTGGGAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: WGRVCPARPAWSVSLEYAGGPPH*KCGSSL
Trigger: CAGGGAGCTCCCACACTTTCAATGGGGAGGCCCACC...GGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR TCA 90 bp AAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGGCGATGCTCGTCATGTaGAGCCTGTTGGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: KGPWWALSPQSTAQRSPRAMLVM*SLLALH
Trigger: GTGCAGGGCCAACAGGCTTCACATGACGAGCATCGC...CCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR TCA 90 bp AGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCAGGCCGGCGTGGTCTGTaGGCCTGGAGTATGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RPRRARPRAPGGRCLLSPGRRGL*AWSMPA
Trigger: AGCTGGCATACTCCAGGCTCACAGACCACGCCGGCC...TGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR TCA 90 bp GTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGGGCCGGCGTGGTCTGTaGGCCTGGAGTATGCCAGCT +
Preference number: 4 (lower is better)
Translates to: VGVVSSVHGPAESQESELGRRGL*AWSMPA
Trigger: AGCTGGCATACTCCAGGCTCACAGACCACGCCGGCC...CAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp TGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGCCTCCACCTGCCGGATaGGGTTGCGGCCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: CSGFPAVSTTRRFGSPRKPPPAG*GCGPGA
Trigger: TGCACCTGGGCCGCAACCGCATCCGGCAGGTGGAGG...CTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp CCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGTGGTTGCGTTGCAGCTaGAGGGTGCGCAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PRRARPRAPGGRCLLSPRWLRCS*RVRRPV
Trigger: CACTGGCCTGCGCACCCTGCAGCTGCAACGCAACCA...CCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp AGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCTGGTTGCGTTGCAGCTaGAGGGTGCGCAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RRARPRAPGGRCLLSPRPWLRCS*RVRRPV
Trigger: CACTGGCCTGCGCACCCTGCAGCTGCAACGCAACCA...GGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GGCAGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGGCATCCGCAGCTGGTTaGGTTGCAGCTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GSRIRTCSGFPAVSTTRRASAAG*VAAAGC
Trigger: GCACCCTGCAGCTGCAACGCAACCAGCTGCGGATGC...CCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp GGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCAGGGCTTGGAGCTCATaGCAGGTGCCTGGCCCGATG +
Preference number: 4 (lower is better)
Translates to: GGPGEPDQGPLVGVVSSVRAWSS*QVPGPM
Trigger: CATCGGGCCAGGCACCTGGCATGAGCTCCAAGCCCT...GACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GGAGTTTGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGAGGGCTTGGAGCTCATaGCAGGTGCCTGGCCCGATG +
Preference number: 4 (lower is better)
Translates to: GVWGRVCPARPAWSVSLERAWSS*QVPGPM
Trigger: CATCGGGCCAGGCACCTGGCATGAGCTCCAAGCCCT...CTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp CCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGAGGGCTTGGAGCTCATaGCAGGTGCCTGGCCCGATG +
Preference number: 4 (lower is better)
Translates to: PRRARPRAPGGRCLLSPRRAWSS*QVPGPM
Trigger: CATCGGGCCAGGCACCTGGCATGAGCTCCAAGCCCT...CCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp CCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCTCTGTGGACAGGGACTaGGCCTTCTCCGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PWRPRRARPRAPGGRCLLSVDRD*AFSVRL
Trigger: CAGCCTCACGGAGAAGGCGCAGTCCCTGTCCACAGA...GAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp GGCAGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGCGGTTGCCCTCGAGGTaGAGCTCCTCTAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GSRIRTCSGFPAVSTTRRRLPSR*SSSRAS
Trigger: TGAGGCCCTAGAGGAGCTGCACCTCGAGGGCAACCG...CCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR GCA 90 bp CCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCGGTTGCCCTCGAGGTaGAGCTCCTCTAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PRRARPRAPGGRCLLSPRRLPSR*SSSRAS
Trigger: TGAGGCCCTAGAGGAGCTGCACCTCGAGGGCAACCG...CCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCAGCTGTGTGCGTGGCCGATGCGGTTaGCCTCGAGGTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VCPARPAWSVSLEYASCVRGRCG*PRGAAP
Trigger: AGGAGCTGCACCTCGAGGGCAACCGCATCGGCCACG...CACACAGCTGGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp AGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCAGCTGTCGTGGCCGATGCGGTTaGCCTCGAGGTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RVCPARPAWSVSLEYASCRGRCG*PRGAAP
Trigger: AGGAGCTGCACCTCGAGGGCAACCGCATCGGCCACG...ACAGCTGGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGCTGCTCCGGATTCCCTaGCGTGTCCACCACACGCAG +
Preference number: 4 (lower is better)
Translates to: AQESQTKGPWWALSPQSTLLRIP*RVHHTQ
Trigger: CTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAG...CGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GGAGTTTGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGCTGCTCCGGATTCCCTaGCGTGTCCACCACACGCAG +
Preference number: 4 (lower is better)
Translates to: GVWGRVCPARPAWSVSLELLRIP*RVHHTQ
Trigger: CTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAG...CTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GGCAGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGCTGCTCCGGATTCCCTaGCGTGTCCACCACACGCAG +
Preference number: 4 (lower is better)
Translates to: GSRIRTCSGFPAVSTTRRLLRIP*RVHHTQ
Trigger: CTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAG...CCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR GCA 90 bp GGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCACTGCTCCGGATTCCCTaGCGTGTCCACCACACGCAG +
Preference number: 4 (lower is better)
Translates to: GEPDQGPLVGVVSSVHGPLLRIP*RVHHTQ
Trigger: CTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAG...TGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp CCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCTGCTCCGGATTCCCTaGCGTGTCCACCACACGCAG +
Preference number: 4 (lower is better)
Translates to: PGEPDQGPLVGVVSSVHGLLRIP*RVHHTQ
Trigger: CTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAG...GCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp CCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTAGCCGGATCAGGACCTaGTCCGGATTCCCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: PLVGVVSSVHGPAESQESSRIRT*SGFPAV
Trigger: CACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCT...AGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp AGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCAGCCGGATCAGGACCTaGTCCGGATTCCCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: RARPRAPGGRCLLSPRPSSRIRT*SGFPAV
Trigger: CACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCT...GCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp TCTGAGCTGCTCTGCTGGGCCTCTCTAGGATCAGGGGCCCCCTGCCCGTGGCCCGGCCTTGGGCGTCCCTaGAATCACACGTGGCTAGGT +
Preference number: 4 (lower is better)
Translates to: SELLCWASLGSGAPCPWPGLGRP*NHTWLG
Trigger: ACCTAGCCACGTGTGATTGCAGGGACGCCCAAGGCC...GGGCCACGGGCAGGGGGCCCCTGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR GCA 90 bp AAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGGGCCTTGGGCGTCCCTaGAATCACACGTGGCTAGGT +
Preference number: 4 (lower is better)
Translates to: KGPWWALSPQSTAQRSPRGLGRP*NHTWLG
Trigger: ACCTAGCCACGTGTGATTGCAGGGACGCCCAAGGCC...CCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CCA 90 bp TTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTCTGCTGCGGCCACGTGGTTGTaGGGCAGCACCAGGGCACGC +
Preference number: 4 (lower is better)
Translates to: LSPQSTAQRSPRSLSCSAAATWL*GSTRAR
Trigger: GCGTGCCCTGGTGCTGCCCCACAACCACGTGGCCGC...AGCAGAGCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp GGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGACCGTCAGGCCCGGTGTaGCGACCAGGTCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: GSGPAPDSLPCPPHAGLGPSGPV*RPGHGH
Trigger: GTGCCCGTGACCTGGTCGCCACACCGGGCCTGACGG...TCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp CTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGGCGGTGCACACGGGCGCTaGCCAGGCGGTTATAGGCCA +
Preference number: 4 (lower is better)
Translates to: LRIPCRVHHTQVWEPQEGGAHGR*PGGYRP
Trigger: TGGCCTATAACCGCCTGGCCAGCGCCCGTGTGCACC...GCCTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp TGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCGGTGCACACGGGCGCTaGCCAGGCGGTTATAGGCCA +
Preference number: 4 (lower is better)
Translates to: WWALSPQSTAQRSPRSLSGAHGR*PGGYRP
Trigger: TGGCCTATAACCGCCTGGCCAGCGCCCGTGTGCACC...GCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCATCGAGCATCCGCAGCTaGTTGCGTTGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PRAPGGRCLLSPRPSGVPSSIRS*LRCSCR
Trigger: CCTGCAGCTGCAACGCAACCAGCTGCGGATGCTCGA...TGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGCCTGTGCCTGACCTaGAGGGCTTGGAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: PWRPRRARPRAPGGRCLLSLCLT*RAWSSC
Trigger: GCATGAGCTCCAAGCCCTCCAGGTCAGGCACAGGCT...GAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp CCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCAGAGGTGCTGCAGCTaGGTGAGGGACTCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PGEPDQGPLVGVVSSVHGQRCCS*VRDSKA
Trigger: GGCCTTCGAGTCCCTCACCCAGCTGCAGCACCTCTG...GCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp GGAGTTTGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGAGCAGGCTCGGCCACTaGGTGGGCCTCCCCATTGAA +
Preference number: 4 (lower is better)
Translates to: GVWGRVCPARPAWSVSLESRLGH*VGLPIE
Trigger: TTCAATGGGGAGGCCCACCCAGTGGCCGAGCCTGCT...CTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp GGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCAGCAGGCTCGGCCACTaGGTGGGCCTCCCCATTGAA +
Preference number: 4 (lower is better)
Translates to: GGPGEPDQGPLVGVVSSVSRLGH*VGLPIE
Trigger: TTCAATGGGGAGGCCCACCCAGTGGCCGAGCCTGCT...GACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp CACGTGGCTAGGTCGCACAGGGTGCTGTTTGGTGACCCCAGTGTGTGCCTCAAGGCCTCGGGGCCCACGTaGCCGATGCGGTTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: HVARSHRVLFGDPSVCLKASGPT*PMRLPS
Trigger: CGAGGGCAACCGCATCGGCCACGTGGGCCCCGAGGC...CTTGAGGCACACACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGCCACGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CCA 90 bp GGGAGGCAGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCACCACACGCAGGTTTaGGAGCCCCAGGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GRQPDQDLLRIPCRVHHTHHTQV*EPQEGL
Trigger: GAGGCCTTCCTGGGGCTCCCAAACCTGCGTGTGGTG...CGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR CCA 90 bp CCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCACACCACACGCAGGTTTaGGAGCCCCAGGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PGGPGEPDQGPLVGVVSSHHTQV*EPQEGL
Trigger: GAGGCCTTCCTGGGGCTCCCAAACCTGCGTGTGGTG...TGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGACCAAGGGCCCCTGGTaGGCGTTGTCTCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: PRRARPRAPGGRCLLSPRTKGPW*ALSPQS
Trigger: GGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGT...CCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTACCAAGGGCCCCTGGTaGGCGTTGTCTCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: PLVGVVSSVHGPAESQESTKGPW*ALSPQS
Trigger: GGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGT...AGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCACCAAGGGCCCCTGGTaGGCGTTGTCTCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: QESQTKGPWWALSPQSTATKGPW*ALSPQS
Trigger: GGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGT...GGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp TCACCCTCGGGGCACCTGAGGAAGAGGGCACGCAGGCGGGGTGTGCTGAGGAAGCAGACCAAGGGCCCCTaGTGGGCGTTGTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SPSGHLRKRARRRGVLRKQTKGP*WALSPQ
Trigger: CTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTG...CTTCCTCAGCACACCCCGCCTGCGTGCCCTCTTCCTCAGGTGCCCCGAGGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp CAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGACCAAGGGCCCCTaGTGGGCGTTGTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: QESQTKGPWWALSPQSTAQTKGP*WALSPQ
Trigger: CTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTG...GGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp GCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGACCCTGCAATCACACGTaGCTAGGTCGCACAGGGTGC +
Preference number: 4 (lower is better)
Translates to: ARPRAPGGRCLLSPRPSGPCNHT*LGRTGC
Trigger: GCACCCTGTGCGACCTAGCCACGTGTGATTGCAGGG...TCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR TCA 90 bp AGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCAGCTGTGGGTTCGCAGGCCACTaGGGCGGGACAGCTCATTGT +
Preference number: 4 (lower is better)
Translates to: RVCPARPAWSVSLEYASCGFAGH*GGTAHC
Trigger: ACAATGAGCTGTCCCGCCTCAGTGGCCTGCGAACCC...ACAGCTGGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR TCA 90 bp GTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCAGCTGTGTGTGGGCGGCAGGTAGCTaGGCTGGTTGTTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: VCPARPAWSVSLEYASCVWAAGS*AGCWRG
Trigger: GCCTCTCCAACAACCAGCTCAGCTACCTGCCGCCCA...CACACAGCTGGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR TCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGTGGAGCCGCTCGAGTaGGGGCGGCAGGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLVEPLE*GRQAGR
Trigger: CCGCCCAGCCTGCCGCCCTCACTCGAGCGGCTCCAC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR TCA 90 bp TCACCCTCGGGGCACCTGAGGAAGAGGGCACGCAGGCGGGGTGTGCTGAGGAAGGGCTATGCAGCTTGCTaGAGGTGGTGGCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: SPSGHLRKRARRRGVLRKGYAAC*RWWHPG
Trigger: GCCTGGATGCCACCACCTTCAGCAAGCTGCATAGCC...CTTCCTCAGCACACCCCGCCTGCGTGCCCTCTTCCTCAGGTGCCCCGAGGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR TCA 90 bp CAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCCCAGAGCTGGGGGATaGTGTCTCTCTCCCCCATCA +
Preference number: 4 (lower is better)
Translates to: QESQTKGPWWALSPQSTAPRAGG*CLSPPS
Trigger: TGATGGGGGAGAGAGACATCATCCCCCAGCTCTGGG...GGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR TCA 90 bp GACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGGTGGGCCTCCCCATTaGAAGTGTGGGAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: DLLRIPCRVHHTQVWEPQGGPPH*KCGSSL
Trigger: CAGGGAGCTCCCACACTTTCAATGGGGAGGCCCACC...CTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR TCA 90 bp AGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGCGATGCTCGTCATGTaGAGCCTGTTGGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: RARPRAPGGRCLLSPRPSAMLVM*SLLALH
Trigger: GTGCAGGGCCAACAGGCTTCACATGACGAGCATCGC...GCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR TCA 90 bp TCACCCTCGGGGCACCTGAGGAAGAGGGCACGCAGGCGGGGTGTGCTGAGGAAGGCGATGCTCGTCATGTaGAGCCTGTTGGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: SPSGHLRKRARRRGVLRKAMLVM*SLLALH
Trigger: GTGCAGGGCCAACAGGCTTCACATGACGAGCATCGC...CTTCCTCAGCACACCCCGCCTGCGTGCCCTCTTCCTCAGGTGCCCCGAGGGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR TCA 90 bp TCTGAGCTGCTCTGCTGGGCCTCTCTAGGATCAGGGGCCCCCTGCCCGTGGCCCACAGCTCATTGTGGCTaGGGTCCAGCATCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SELLCWASLGSGAPCPWPTAHCG*GPASGG
Trigger: CCCTCCAGATGCTGGACCTCAGCCACAATGAGCTGT...GGGCCACGGGCAGGGGGCCCCTGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR TCA 90 bp GCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCGATGCTCGTCATGTaGAGCCTGTTGGCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: AQESQTKGPWWALSPQSTAMLVM*SLLALR
Trigger: CCTCAGGGCCAACAGGCTTCACATGACGAGCATCGC...CGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR GCA 90 bp GGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGGGCAGGCCAGCGTTaGTCAGCTGGTTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GPGEPDQGPLVGVVSSVHGAGQR*SAGCCG
Trigger: TCCACAACAACCAGCTGAGCAACGCTGGCCTGCCCC...GTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR GCA 90 bp GAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCCGCGGTCCAGCCCATTaGCATAGAGGTGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: EAQESQTKGPWWALSPQSRGPAH*HRGAAC
Trigger: ACACGCTGCACCTCTATGGCAATGGGCTGGACCGCG...GGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp AGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCAGCTGTTGGTTGCGTTGCAGCTaGAGGGTGCGCAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RVCPARPAWSVSLEYASCWLRCS*RVRRPV
Trigger: CACTGGCCTGCGCACCCTGCAGCTGCAACGCAACCA...ACAGCTGGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp CTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGGCGCATCCGCAGCTGGTTaGGTTGCAGCTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LRIPCRVHHTQVWEPQEGASAAG*VAAAGC
Trigger: GCACCCTGCAGCTGCAACGCAACCAGCTGCGGATGC...GCCTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp GTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGGCATCCGCAGCTGGTTaGGTTGCAGCTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: VGVVSSVHGPAESQESELASAAG*VAAAGC
Trigger: GCACCCTGCAGCTGCAACGCAACCAGCTGCGGATGC...CAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp TGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGGGAGCTCATGCCAGGTaGCTGGCCCGATGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: CSGFPAVSTTRRFGSPRKGAHAR*LARCRR
Trigger: TCGGCGACATCGGGCCAGGCACCTGGCATGAGCTCC...CTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR GCA 90 bp CTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGGCAGGGCTTGGAGCTCATaGCAGGTGCCTGGCCCGATG +
Preference number: 4 (lower is better)
Translates to: LRIPCRVHHTQVWEPQEGRAWSS*QVPGPM
Trigger: CATCGGGCCAGGCACCTGGCATGAGCTCCAAGCCCT...GCCTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR GCA 90 bp GGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCTGGCTAACCAGCCTGTaGCTGACCTGGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GGPGEPDQGPLVGVVSSVWLTSL*LTWRAW
Trigger: CCAAGCCCTCCAGGTCAGGCACAGGCTGGTTAGCCA...GACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp TGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCTGGCTAACCAGCCTGTaGCTGACCTGGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: WGRVCPARPAWSVSLEYAWLTSL*LTWRAW
Trigger: CCAAGCCCTCCAGGTCAGGCACAGGCTGGTTAGCCA...GGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp CCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCTCTCTGAGAGTCCCCTaGCCCCTTCATACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PWRPRRARPRAPGGRCLLSLRVP*PLHTSL
Trigger: CAGGCTGGTATGAAGGGGGCAGGGGACTCTCAGAGA...GAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp TTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTCTGCTGGCCCACGTGGCCGATaGGGTTGCCCTCGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: LSPQSTAQRSPRSLSCSAGPRGR*GCPRGA
Trigger: TGCACCTCGAGGGCAACCGCATCGGCCACGTGGGCC...AGCAGAGCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCAGCTGTGTGAGCCGGATCAGGACCTaGTCCGGATTCCCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: VCPARPAWSVSLEYASCVSRIRT*SGFPAV
Trigger: CACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCT...CACACAGCTGGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGGCCAGTGGGCAGGCCCATaGGCAGCCGGGTTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LRIPCRVHHTQVWEPQEGQWAGP*AAGLAD
Trigger: ATCAGCTAACCCGGCTGCCCATGGGCCTGCCCACTG...GCCTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp GGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCATCGAGCATCCGCAGCTaGTTGCGTTGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GEPDQGPLVGVVSSVHGPSSIRS*LRCSCR
Trigger: CCTGCAGCTGCAACGCAACCAGCTGCGGATGCTCGA...TGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp GGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAAGCCTGTGCCTGACCTaGAGGGCTTGGAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: GEPDQGPLVGVVSSVHGPSLCLT*RAWSSC
Trigger: GCATGAGCTCCAAGCCCTCCAGGTCAGGCACAGGCT...TGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp GAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCGCAGGGGGTTATAGATaGCATCGTGGCAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: EAQESQTKGPWWALSPQSAGGYR*HRGSPR
Trigger: CCTGGGGCTGCCACGATGCCATCTATAACCCCCTGC...GGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp CCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGCAGGGGGTTATAGATaGCATCGTGGCAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PGGPGEPDQGPLVGVVSSAGGYR*HRGSPR
Trigger: CCTGGGGCTGCCACGATGCCATCTATAACCCCCTGC...TGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp TGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCCACCACACGCAGGTTTaGGAGCCCCAGGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: WALSPQSTAQRSPRSLSCHHTQV*EPQEGL
Trigger: GAGGCCTTCCTGGGGCTCCCAAACCTGCGTGTGGTG...GCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp AGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACACCACACGCAGGTTTaGGAGCCCCAGGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RPRRARPRAPGGRCLLSPHHTQV*EPQEGL
Trigger: GAGGCCTTCCTGGGGCTCCCAAACCTGCGTGTGGTG...TGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp TTGGGAGTTTGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGCACCACACGCAGGTTTaGGAGCCCCAGGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LGVWGRVCPARPAWSVSLHHTQV*EPQEGL
Trigger: GAGGCCTTCCTGGGGCTCCCAAACCTGCGTGTGGTG...CAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp AGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGTTCAGTGGGTGGCCTTaGGCGTCCCTGCAATCACAC +
Preference number: 4 (lower is better)
Translates to: SQTKGPWWALSPQSTAQRFSGWP*ASLQSH
Trigger: GTGTGATTGCAGGGACGCCCAAGGCCACCCACTGAA...CCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR TCA 90 bp AGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCAGCTGAGCGGCTCTGGTaGTGTTGTCCGGGAACACTC +
Preference number: 4 (lower is better)
Translates to: RPRRARPRAPGGRCLLSPAERLW*CCPGTL
Trigger: GAGTGTTCCCGGACAACATCACCAGAGCCGCTCAGC...TGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR TCA 90 bp TTGGGAGTTTGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGCTGAGCGGCTCTGGTaGTGTTGTCCGGGAACACTC +
Preference number: 4 (lower is better)
Translates to: LGVWGRVCPARPAWSVSLAERLW*CCPGTL
Trigger: GAGTGTTCCCGGACAACATCACCAGAGCCGCTCAGC...CAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR TCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGTGGAGCCGCTCGAGTaGGGGCGGCAGGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSVEPLE*GRQAGR
Trigger: CCGCCCAGCCTGCCGCCCTCACTCGAGCGGCTCCAC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR TCA 90 bp AGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGGGGGCACCTTGGAGATaGGATTGTTCTGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SQTKGPWWALSPQSTAQRGAPWR*DCSAGG
Trigger: TCCACCTGCAGAACAATCTCATCTCCAAGGTGCCCC...CCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR TCA 90 bp AGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCAGGCTATGCAGCTTGCTaGAGGTGGTGGCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: RPRRARPRAPGGRCLLSPGYAAC*RWWHPG
Trigger: GCCTGGATGCCACCACCTTCAGCAAGCTGCATAGCC...TGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR TCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCCCGGCGGGCAGCCCTaGGCTCCCCAGCTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLPGGQP*APQLVV
Trigger: CACAACCAGCTGGGGAGCTCAGGGCTGCCCGCCGGG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGGCCGGATGGGGTGGTaGGGACAGGCCAGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLGRMGW*GQASPS
Trigger: GGACGGGCTGGCCTGTCCTCACCACCCCATCCGGCC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339560.10
ENST00000672524.1
CDS-3UTR TCA 90 bp GGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAACTGAGAGCTTGTTGTaGGCCACGCAGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GEPDQGPLVGVVSSVHGPTESLL*ATQRCC
Trigger: GCAGCACCTCTGCGTGGCTCACAACAAGCTCTCAGT...TGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR TCA 90 bp CCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAAAACTGAGGGGCCACTaGGAGCTTGTTGTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PRAPGGRCLLSPRPSGVPKLRGH*ELVVSH
Trigger: GTGGCTCACAACAAGCTCTCAGTGGCCCCTCAGTTT...TGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR TCA 90 bp CAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCTCTTCCCCCGCAGAGTaGGAGTTACCGAAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: QESQTKGPWWALSPQSTASSPAE*ELPKQA
Trigger: AGCCTGCTTCGGTAACTCTCACTCTGCGGGGGAAGA...GGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR TCA 90 bp GAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCTCTTCCCCCGCAGAGTaGGAGTTACCGAAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: EAQESQTKGPWWALSPQSSSPAE*ELPKQA
Trigger: AGCCTGCTTCGGTAACTCTCACTCTGCGGGGGAAGA...GGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR TCA 90 bp GGAGTTTGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGACAGCTCATTGTGGCTaGGGTCCAGCATCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: GVWGRVCPARPAWSVSLETAHCG*GPASGG
Trigger: CCCTCCAGATGCTGGACCTCAGCCACAATGAGCTGT...CTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587954.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCGTACACGGACCTGAGTaGCGGCTTCTCCCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: GGPGEPDQGPLVGVVSSVVHGPE*RLLPKG
Trigger: ACCTTTGGGGAGAAGCCGGCACTCAGGTCCGTGTAC...GACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCGAGCCGCCTCCACCTaGCGGATGCGGTTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLRAAST*RMRLRP
Trigger: GGGCCGCAACCGCATCCGGCAGGTGGAGGCGGCTCG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTAGACCACGCGCCCCGTaGAGCCGAGCCGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLRPRAP*SRAAST
Trigger: GGTGGAGGCGGCTCGGCTGCACGGGGCGCGTGGTCT...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCCGCGGTCCAGCCCATTaGCATAGAGGTGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: WALSPQSTAQRSPRSLSCRGPAH*HRGAAC
Trigger: ACACGCTGCACCTCTATGGCAATGGGCTGGACCGCG...GCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCGGAAGGCCCGGTGGTaGACACGGGCGCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLRKARW*TRALAR
Trigger: CCTGGCCAGCGCCCGTGTGCACCACCGGGCCTTCCG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp CCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGGGTCTTGCTGTGTTaGCAGGCTGGTCTCAAACCC +
Preference number: 4 (lower is better)
Translates to: PWRPRRARPRAPGGRCLLRVLLC*QAGLKP
Trigger: GGGTTTGAGACCAGCCTGGCAACACAGCAAGACCCT...GAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp GGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCACGCAGAGGTGCTaGAGCTGGGTGAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: GSGPAPDSLPCPPHAGLGATQRC*SWVRDS
Trigger: CGAGTCCCTCACCCAGCTGCAGCACCTCTGCGTGGC...TCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp GCAGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTCTGTGGACAGGGACTaGGCCTTCTCCGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AAGSGPAPDSLPCPPHAGSVDRD*AFSVRL
Trigger: CAGCCTCACGGAGAAGGCGCAGTCCCTGTCCACAGA...ACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp TGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCTCTCTGAGAGTCCCCTaGCCCCTTCATACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: WGRVCPARPAWSVSLEYASLRVP*PLHTSL
Trigger: CAGGCTGGTATGAAGGGGGCAGGGGACTCTCAGAGA...GGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp GGCAGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGAGGCCTCAGCCGCGATaGTCGTCATGTGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: GSRIRTCSGFPAVSTTRRRPQPR*SSCEAC
Trigger: ACAGGCTTCACATGACGAGCATCGCGGCTGAGGCCT...CCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR GCA 90 bp GTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTCTGCAGAGCCCCCAAAGGGTaGCTGGTCCGTGCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: VVSSVHGPAESQESELLCRAPKG*LVRAEC
Trigger: GCACTCAGCACGGACCAGGCACCCTTTGGGGGCTCT...GCAGAGCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR GCA 90 bp CAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCTAGGTCGCACAGGGTaGTGTTTGGTGACCCCAGTG +
Preference number: 4 (lower is better)
Translates to: QESQTKGPWWALSPQSTALGRTG*CLVTPV
Trigger: CACTGGGGTCACCAAACAGCACCCTGTGCGACCTAG...GGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CCA 90 bp AGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGCACTGTGGTCAGCTaGTTGTGGGAGAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: RARPRAPGGRCLLSPRPSGTVVS*LWERSR
Trigger: CCTGGATCTCTCCCACAACCAGCTGACCACAGTGCC...GCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGGCACTGTGGTCAGCTaGTTGTGGGAGAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: PGGPGEPDQGPLVGVVSSGTVVS*LWERSR
Trigger: CCTGGATCTCTCCCACAACCAGCTGACCACAGTGCC...TGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp AAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGCCTGAGCTCCCCAGCTaGTTGTGCTGCAGCAACAAA +
Preference number: 4 (lower is better)
Translates to: KGPWWALSPQSTAQRSPRPELPS*LCCSNK
Trigger: TTTGTTGCTGCAGCACAACCAGCTGGGGAGCTCAGG...CCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp GTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTCTGCCAGTGGGCAGGCCCATaGGCAGCCGGGTTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: VVSSVHGPAESQESELLCQWAGP*AAGLAD
Trigger: ATCAGCTAACCCGGCTGCCCATGGGCCTGCCCACTG...GCAGAGCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp AAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGGGAAACTCCCAGAGCTaGGGGATGATGTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: KGPWWALSPQSTAQRSPRGNSQS*GMMSLS
Trigger: GGAGAGAGACATCATCCCCCAGCTCTGGGAGTTTCC...CCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp TGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCTCATGTGAAGCCTGTTaGCCCTGCACAGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: WGRVCPARPAWSVSLEYASCEAC*PCTERR
Trigger: CCGCCTCTCTGTGCAGGGCCAACAGGCTTCACATGA...GGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR CCA 90 bp CCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCATCTGAGCTGCTCTGCTaGGCCTCTCTAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: PGGPGEPDQGPLVGVVSSSELLC*ASLGSG
Trigger: CCCTGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGA...TGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp GGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCATCTGAGCTGCTCTGCTaGGCCTCTCTAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: GEPDQGPLVGVVSSVHGPSELLC*ASLGSG
Trigger: CCCTGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGA...TGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp GGGAGGCAGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGTCTGTGTTGGGAGTTTaGGGTAGGGTGTGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: GRQPDQDLLRIPCRVHHTSVLGV*GRVCPA
Trigger: GGCGGGACACACCCTACCCCAAACTCCCAACACAGA...CGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR CCA 90 bp GGCAGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGCTGAGGTCCAGCATCTaGAGGGCTTGGAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: GSRIRTCSGFPAVSTTRRLRSSI*RAWSSC
Trigger: GCATGAGCTCCAAGCCCTCCAGATGCTGGACCTCAG...CCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CCA 90 bp AGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCCTGAGGTCCAGCATCTaGAGGGCTTGGAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: RARPRAPGGRCLLSPRPSLRSSI*RAWSSC
Trigger: GCATGAGCTCCAAGCCCTCCAGATGCTGGACCTCAG...GCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587954.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp TGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCTTTCCCCAGCTGGACTaGTTGTGGGGAGGAGTCCGT +
Preference number: 4 (lower is better)
Translates to: WGRVCPARPAWSVSLEYAFPQLD*LWGGVR
Trigger: ACGGACTCCTCCCCACAACCAGTCCAGCTGGGGAAA...GGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CCA 90 bp GGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCTTTCCCCAGCTGGACTaGTTGTGGGGAGGAGTCCGT +
Preference number: 4 (lower is better)
Translates to: GGPGEPDQGPLVGVVSSVFPQLD*LWGGVR
Trigger: ACGGACTCCTCCCCACAACCAGTCCAGCTGGGGAAA...GACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR TCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCCCGGCGGGCAGCCCTaGGCTCCCCAGCTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSPGGQP*APQLVV
Trigger: CACAACCAGCTGGGGAGCTCAGGGCTGCCCGCCGGG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGGCCGGATGGGGTGGTaGGGACAGGCCAGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSGRMGW*GQASPS
Trigger: GGACGGGCTGGCCTGTCCTCACCACCCCATCCGGCC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339560.10
ENST00000672524.1
CDS-3UTR TCA 90 bp GGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACTCTCGCCCAAGCTGCTaGCCAGGACTTCCTAATGGA +
Preference number: 4 (lower is better)
Translates to: GPGEPDQGPLVGVVSSVHSRPSC*PGLPNG
Trigger: TCCATTAGGAAGTCCTGGTCAGCAGCTTGGGCGAGA...GTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR TCA 90 bp TGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCACAGCTCATTGTGGCTaGGGTCCAGCATCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: WWALSPQSTAQRSPRSLSTAHCG*GPASGQ
Trigger: CTGCCCAGATGCTGGACCTCAGCCACAATGAGCTGT...GCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR TCA 90 bp GCTAGGTCGCACAGGGTGCTGTTTGGTGACCCCAGTGTGTGCCTCAAGACCTCAACAGAGAGGCGGTCATaGCCCTCCCAGGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: ARSHRVLFGDPSVCLKTSTERRS*PSQALP
Trigger: GGGGAGGGCCTGGGAGGGTCATGACCGCCTCTCTGT...TGAGGTCTTGAGGCACACACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR TCA 90 bp GTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGACAGCTCATTGTGGCTaGGGTCCAGCATCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: VGVVSSVHGPAESQESELTAHCG*GPASGG
Trigger: CCCTCCAGATGCTGGACCTCAGCCACAATGAGCTGT...CAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587954.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCGAGCCGCCTCCACCTaGCGGATGCGGTTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSRAAST*RMRLRP
Trigger: GGGCCGCAACCGCATCCGGCAGGTGGAGGCGGCTCG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCAGACCACGCGCCCCGTaGAGCCGAGCCGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSRPRAP*SRAAST
Trigger: GGTGGAGGCGGCTCGGCTGCACGGGGCGCGTGGTCT...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCGGAAGGCCCGGTGGTaGACACGGGCGCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSRKARW*TRALAR
Trigger: CCTGGCCAGCGCCCGTGTGCACCACCGGGCCTTCCG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCTGCCAGGTCGAGGCTaGGCAGGGCACGCAACCGGC +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLLPGRG*AGHATG
Trigger: GCCGGTTGCGTGCCCTGCGCAGCCTCGACCTGGCAG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTACCCGGAGCCGGTTGTaGGCCAGGCTGAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLTRSRL*ARLSSR
Trigger: GCGGGAGCTCAGCCTGGCGCACAACCGGCTCCGGGT...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TCTGAGCTGCTCTGCTGGGCCTCTCTAGGATCAGGGGCCCCCTGCCCGTGGCCCCTAAAGCGATTCTCCTaGCTTGGCTCCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: SELLCWASLGSGAPCPWPLKRFS*LGSPKC
Trigger: GCACTTTGGGGAGCCAAGGCAGGAGAATCGCTTTAG...GGGCCACGGGCAGGGGGCCCCTGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp GGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAAGGGTCTTGCTGTGTTaGCAGGCTGGTCTCAAACCC +
Preference number: 4 (lower is better)
Translates to: GEPDQGPLVGVVSSVHGPRVLLC*QAGLKP
Trigger: GGGTTTGAGACCAGCCTGGCAACACAGCAAGACCCT...TGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp GGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACCCGATCACGGCTCATTaGAGCCTCAAACTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GPGEPDQGPLVGVVSSVHPITAH*SLKLLG
Trigger: GCCCAGAAGTTTGAGGCTGCAATGAGCCGTGATCGG...GTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp CCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCGATCACGGCTCATTaGAGCCTCAAACTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PRRARPRAPGGRCLLSPRPITAH*SLKLLG
Trigger: GCCCAGAAGTTTGAGGCTGCAATGAGCCGTGATCGG...CCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp TGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCAGGCCTCAGCCGCGATaGTCGTCATGTGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: WWALSPQSTAQRSPRSLSRPQPR*SSCEAC
Trigger: ACAGGCTTCACATGACGAGCATCGCGGCTGAGGCCT...GCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp CCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCGAGTCTGAGCTGCTCTaGTGGGCCTCTCTAGGATCA +
Preference number: 4 (lower is better)
Translates to: PGEPDQGPLVGVVSSVHGESELL*WASLGS
Trigger: TGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGACTC...GCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp CAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCGAGTCTGAGCTGCTCTaGTGGGCCTCTCTAGGATCA +
Preference number: 4 (lower is better)
Translates to: QESQTKGPWWALSPQSTAESELL*WASLGS
Trigger: TGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGACTC...GGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp CTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGGCCTAGGTCGCACAGGGTaGTGTTTGGTGACCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LRIPCRVHHTQVWEPQEGLGRTG*CLVTPV
Trigger: CACTGGGGTCACCAAACAGCACCCTGTGCGACCTAG...GCCTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CCA 90 bp CAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCCAGCGTTGCTCAGCTaGTTGTTGTGGAGGTACACG +
Preference number: 4 (lower is better)
Translates to: QESQTKGPWWALSPQSTAPALLS*LLWRYT
Trigger: CGTGTACCTCCACAACAACCAGCTGAGCAACGCTGG...GGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR CCA 90 bp GGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCACCTGAGCTCCCCAGCTaGTTGTGCTGCAGCAACAAA +
Preference number: 4 (lower is better)
Translates to: GEPDQGPLVGVVSSVHGPPELPS*LCCSNK
Trigger: TTTGTTGCTGCAGCACAACCAGCTGGGGAGCTCAGG...TGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCTGAGCTCCCCAGCTaGTTGTGCTGCAGCAACAAA +
Preference number: 4 (lower is better)
Translates to: PGEPDQGPLVGVVSSVHGPELPS*LCCSNK
Trigger: TTTGTTGCTGCAGCACAACCAGCTGGGGAGCTCAGG...GCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGCGGCCACGTGGTTGTaGGGCAGCACCAGGGCACGC +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLAATWL*GSTRAR
Trigger: GCGTGCCCTGGTGCTGCCCCACAACCACGTGGCCGC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCCCAGCGCGGCCACGTaGTTGTGGGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLPSAAT*LWGSTR
Trigger: CCTGGTGCTGCCCCACAACCACGTGGCCGCGCTGGG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCCGTCAGGCCCGGTGTaGCGACCAGGTCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLPSGPV*RPGHGH
Trigger: GTGCCCGTGACCTGGTCGCCACACCGGGCCTGACGG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp GATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGGCCCTGGGGACAGTGTaGCTAACCAGCCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: DQDLLRIPCRVHHTQVWEALGTV*LTSLCL
Trigger: CAGGCACAGGCTGGTTAGCCACACTGTCCCCAGGGC...CTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp TTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTCTGCTCAGAGGTGCTGCAGCTaGGTGAGGGACTCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LSPQSTAQRSPRSLSCSAQRCCS*VRDSKA
Trigger: GGCCTTCGAGTCCCTCACCCAGCTGCAGCACCTCTG...AGCAGAGCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp GGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCAAGGCTGTGTCTCTGTaGACAGGGACTGCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GGPGEPDQGPLVGVVSSVKAVSL*TGTAPS
Trigger: AGAAGGCGCAGTCCCTGTCCACAGAGACACAGCCTT...GACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp GGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCATCTCCCCCATCAGTTTaGGAGCTCTGGAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: GEPDQGPLVGVVSSVHGPSPPSV*ELWRAE
Trigger: TTCTGCCCTCCAGAGCTCCCAAACTGATGGGGGAGA...TGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp GGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGAAACTCCCAGAGCTaGGGGATGATGTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GPGEPDQGPLVGVVSSVHGNSQS*GMMSLS
Trigger: GGAGAGAGACATCATCCCCCAGCTCTGGGAGTTTCC...GTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp GATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGGGCTCGGCCACTGGGTaGGCCTCCCCATTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: DQDLLRIPCRVHHTQVWEGSATG*ASPLKV
Trigger: CACTTTCAATGGGGAGGCCCACCCAGTGGCCGAGCC...CTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp AGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCATCATGTGAAGCCTGTTaGCCCTGCACAGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RPRRARPRAPGGRCLLSPSCEAC*PCTERR
Trigger: CCGCCTCTCTGTGCAGGGCCAACAGGCTTCACATGA...TGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR CCA 90 bp TCCCTGCAATCACACGTGGCTAGGTCGCACAGGGTGCTGTTTGGTGACCCCAGTGCCCACGTGGGGTGGTaGGAGGCAGCCGGATCAGGA +
Preference number: 4 (lower is better)
Translates to: SLQSHVARSHRVLFGDPSAHVGW*EAAGSG
Trigger: TCCTGATCCGGCTGCCTCCCACCACCCCACGTGGGC...ACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGCCACGTGTGATTGCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CCA 90 bp GATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCAGACCAAGGGCCCCTaGTGGGCGTTGTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: DQDLLRIPCRVHHTQVWEQTKGP*WALSPQ
Trigger: CTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTG...CTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR CCA 90 bp AGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCATCTGTGTTGGGAGTTTaGGGTAGGGTGTGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: RPRRARPRAPGGRCLLSPSVLGV*GRVCPA
Trigger: GGCGGGACACACCCTACCCCAAACTCCCAACACAGA...TGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp CCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCATGCCTCCATCTGTGTTaGGAGTTTGGGGTAGGGTGT +
Preference number: 4 (lower is better)
Translates to: PRAPGGRCLLSPRPSGVPCLHLC*EFGVGC
Trigger: ACACCCTACCCCAAACTCCCAACACAGATGGAGGCA...TGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp AGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGTGGGGAGGAGTCCGTaGACAGAGCCCCCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: SRIRTCSGFPAVSTTRRFVGRSP*TEPPKG
Trigger: ACCCTTTGGGGGCTCTGTCCACGGACTCCTCCCCAC...AAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CCA 90 bp CTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGGCTTCAGTGGGTGGCCTTaGGCGTCCCTGCAATCACAC +
Preference number: 4 (lower is better)
Translates to: LRIPCRVHHTQVWEPQEGFSGWP*ASLQSH
Trigger: GTGTGATTGCAGGGACGCCCAAGGCCACCCACTGAA...GCCTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR TCA 90 bp TTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTCTGCTCCCAGAGCTGGGGGATaGTGTCTCTCTCCCCCATCA +
Preference number: 4 (lower is better)
Translates to: LSPQSTAQRSPRSLSCSAPRAGG*CLSPPS
Trigger: TGATGGGGGAGAGAGACATCATCCCCCAGCTCTGGG...AGCAGAGCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR TCA 90 bp GGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCAGATTGTTCTTGTTGTaGGCCACGCAGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GGPGEPDQGPLVGVVSSVRLFLL*ATQRCC
Trigger: GCAGCACCTCTGCGTGGCTCACAACAAGAACAATCT...GACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR TCA 90 bp AAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGGGGGCACCTTGGAGATaGGATTGTTCTTGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: KGPWWALSPQSTAQRSPRGAPWR*DCSCCE
Trigger: CTCACAACAAGAACAATCTCATCTCCAAGGTGCCCC...CCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR TCA 90 bp TCCCTGCAATCACACGTGGCTAGGTCGCACAGGGTGCTGTTTGGTGACCCCAGTGGCCGGCGTGGTCTGTaGGCCTGGAGTATGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SLQSHVARSHRVLFGDPSGRRGL*AWSMPA
Trigger: AGCTGGCATACTCCAGGCTCACAGACCACGCCGGCC...ACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGCCACGTGTGATTGCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR GCA 90 bp GAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCGAGATGAGATTGTTCTaGAGGTGGAGCCGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: EAQESQTKGPWWALSPQSEMRLF*RWSRSS
Trigger: ACTCGAGCGGCTCCACCTGCAGAACAATCTCATCTC...GGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCGGTTGCGGCCCAGGTaGAGGATAGCCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLRLRPR*RIARVR
Trigger: CCGGACCCTGGCTATCCTGCACCTGGGCCGCAACCG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCCTCCACCTGCCGGATaGGGTTGCGGCCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLPPPAG*GCGPGA
Trigger: TGCACCTGGGCCGCAACCGCATCCGGCAGGTGGAGG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp GATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCGCGGTCCAGCCCATTaGCATAGAGGTGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: DQDLLRIPCRVHHTQVWERGPAH*HRGAAC
Trigger: ACACGCTGCACCTCTATGGCAATGGGCTGGACCGCG...CTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCTGCCAGGTCGAGGCTaGGCAGGGCACGCAACCGGC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSLPGRG*AGHATG
Trigger: GCCGGTTGCGTGCCCTGCGCAGCCTCGACCTGGCAG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCACCCGGAGCCGGTTGTaGGCCAGGCTGAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSTRSRL*ARLSSR
Trigger: GCGGGAGCTCAGCCTGGCGCACAACCGGCTCCGGGT...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp GCTAGGTCGCACAGGGTGCTGTTTGGTGACCCCAGTGTGTGCCTCAAGACCTCAGGAGCTCATGCCAGGTaGCTGGCCCGATGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: ARSHRVLFGDPSVCLKTSGAHAR*LARCRR
Trigger: TCGGCGACATCGGGCCAGGCACCTGGCATGAGCTCC...TGAGGTCTTGAGGCACACACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR GCA 90 bp CAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCTAAAGCGATTCTCCTaGCTTGGCTCCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: QESQTKGPWWALSPQSTALKRFS*LGSPKC
Trigger: GCACTTTGGGGAGCCAAGGCAGGAGAATCGCTTTAG...GGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp CTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGGCGGGACTACAGGCATGTaGCACCACGCTTGGCTATGT +
Preference number: 4 (lower is better)
Translates to: LRIPCRVHHTQVWEPQEGGTTGM*HHAWLC
Trigger: ACATAGCCAAGCGTGGTGGCACATGCCTGTAGTCCC...GCCTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTACCTCCTGGAGCCTCTaGTGTGGCCACCACCGCCCC +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLTSWSL*CGHHRP
Trigger: GGGGCGGTGGTGGCCACAGCAGAGGCTCCAGGAGGT...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339560.10
ENST00000672524.1
CDS-3UTR GCA 90 bp GCTAGGTCGCACAGGGTGCTGTTTGGTGACCCCAGTGTGTGCCTCAAGACCTCACGTGGCCGATGCGGTTaGCCTCGAGGTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ARSHRVLFGDPSVCLKTSRGRCG*PRGAAP
Trigger: AGGAGCTGCACCTCGAGGGCAACCGCATCGGCCACG...TGAGGTCTTGAGGCACACACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR GCA 90 bp CTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGGCGAGTCTGAGCTGCTCTaGTGGGCCTCTCTAGGATCA +
Preference number: 4 (lower is better)
Translates to: LRIPCRVHHTQVWEPQEGESELL*WASLGS
Trigger: TGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGACTC...GCCTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR GCA 90 bp GCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGCTGGTCCGTGCTGAGTaGTGGAAGGGTTTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: AQESQTKGPWWALSPQSTLVRAE*WKGLAL
Trigger: TAAAGCCAAACCCTTCCAGCACTCAGCACGGACCAG...CGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CCA 90 bp GGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGAGATGAGGTTGTTGTaGAGGTTGAGGGTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: GEPDQGPLVGVVSSVHGPEMRLL*RLRVRR
Trigger: CCTGCGAACCCTCAACCTCCACAACAACCTCATCTC...TGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp TGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTCTCCATCACTTGGTTaGCAGCCAGATCCGCGACAC +
Preference number: 4 (lower is better)
Translates to: WALSPQSTAQRSPRSLSCSPSLG*QPDPRH
Trigger: GTGTCGCGGATCTGGCTGCCAACCAAGTGATGGAGA...GCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR CCA 90 bp CCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGAAGATCTCCATCACTTaGTTGGCAGCCAGATCCGCG +
Preference number: 4 (lower is better)
Translates to: PRRARPRAPGGRCLLSPRKISIT*LAARSA
Trigger: CGCGGATCTGGCTGCCAACCAAGTGATGGAGATCTT...CCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGCGGCCACGTGGTTGTaGGGCAGCACCAGGGCACGC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSAATWL*GSTRAR
Trigger: GCGTGCCCTGGTGCTGCCCCACAACCACGTGGCCGC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCCCAGCGCGGCCACGTaGTTGTGGGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSPSAAT*LWGSTR
Trigger: CCTGGTGCTGCCCCACAACCACGTGGCCGCGCTGGG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCCGTCAGGCCCGGTGTaGCGACCAGGTCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSPSGPV*RPGHGH
Trigger: GTGCCCGTGACCTGGTCGCCACACCGGGCCTGACGG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCTGAGCTCCCGCAGTTaGTCCAGGCCGGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLLSSRS*SRPARG
Trigger: GCCTCTGGCCGGCCTGGACCAACTGCGGGAGCTCAG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCTCATGCCAGGTGCCTaGCCCGATGTCGCCGACCCG +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLLMPGA*PDVADP
Trigger: CGGGTCGGCGACATCGGGCCAGGCACCTGGCATGAG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp GGAGTTTGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGGCTGTGTTGCCAGGCTaGTCTCAAACCCATAGCCTA +
Preference number: 4 (lower is better)
Translates to: GVWGRVCPARPAWSVSLEAVLPG*SQTHSL
Trigger: TAGGCTATGGGTTTGAGACCAGCCTGGCAACACAGC...CTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp GACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGTGGATCTCTTGCAGGTaGGCAGTAACTGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: DLLRIPCRVHHTQVWEPQWISCR*AVTGAR
Trigger: CCTTGCCCCAGTTACTGCCCACCTGCAAGAGATCCA...CTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp GGGAGGCAGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGTGGAGGGCAGAAATGTaGATCTCTTGCAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GRQPDQDLLRIPCRVHHTWRAEM*ISCRWA
Trigger: TGCCCACCTGCAAGAGATCCACATTTCTGCCCTCCA...CGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp CCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCTCAGTTTGGGAGCTCTaGAGGGCAGAAATGTGGATC +
Preference number: 4 (lower is better)
Translates to: PWRPRRARPRAPGGRCLLSVWEL*RAEMWI
Trigger: GATCCACATTTCTGCCCTCCAGAGCTCCCAAACTGA...GAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp TGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGTCATGTGAAGCCTGTTaGCCCTGCACAGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: CSGFPAVSTTRRFGSPRKSCEAC*PCTERR
Trigger: CCGCCTCTCTGTGCAGGGCCAACAGGCTTCACATGA...CTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR CCA 90 bp GTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTCTGCTCTGAGCTGCTCTGCTaGGCCTCTCTAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: VVSSVHGPAESQESELLCSELLC*ASLGSG
Trigger: CCCTGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGA...GCAGAGCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp GATGCTCGTCATGTGAAGCCTGTTGGCCCTGCACAGAGAGGCGGTCATGACCCTCTGTGTCTCGGCCAGTaGCAGGCAGAGCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: DARHVKPVGPAQRGGHDPLCLGQ*QAEQAQ
Trigger: CTGGGCCTGCTCTGCCTGCCACTGGCCGAGACACAG...AGGGTCATGACCGCCTCTCTGTGCAGGGCCAACAGGCTTCACATGACGAGCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp TCCCTGCAATCACACGTGGCTAGGTCGCACAGGGTGCTGTTTGGTGACCCCAGTCCCGCCAGGCCGGCGTaGTCTGTGAGCCTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: SLQSHVARSHRVLFGDPSPARPA*SVSLEY
Trigger: ATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGG...ACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGCCACGTGTGATTGCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CCA 90 bp TGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCTGCCTCCATCTGTGTTaGGAGTTTGGGGTAGGGTGT +
Preference number: 4 (lower is better)
Translates to: WGRVCPARPAWSVSLEYACLHLC*EFGVGC
Trigger: ACACCCTACCCCAAACTCCCAACACAGATGGAGGCA...GGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR TCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGGCAGCCGGGTTAGCTaGTTCCCTGCCAGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLGSRVS*FPARSR
Trigger: CCTCGACCTGGCAGGGAATCAGCTAACCCGGCTGCC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGGTTGTGCGCCAGGCTaGGCTCCCGCAGTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLGCAPG*APAVGP
Trigger: TGGACCAACTGCGGGAGCTCAGCCTGGCGCACAACC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR TCA 90 bp CTAGGTCGCACAGGGTGCTGTTTGGTGACCCCAGTGTGTGCCTCAAGACCTCAAGGTTGTGCGCCAGGCTaGGCTCCCGCAGTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LGRTGCCLVTPVCASRPQGCAPG*APAVGP
Trigger: TGGACCAACTGCGGGAGCTCAGCCTGGCGCACAACC...TTGAGGTCTTGAGGCACACACTGGGGTCACCAAACAGCACCCTGTGCGACCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCCTCCACCTGCCGGATaGGGTTGCGGCCCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSPPPAG*GCGPGA
Trigger: TGCACCTGGGCCGCAACCGCATCCGGCAGGTGGAGG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCGCAGCTGGTTGCGTTaGAGCTGCAGGGTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLRSWLR*SCRVRR
Trigger: CCTGCGCACCCTGCAGCTGCAACGCAACCAGCTGCG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGGAGCTCATGCCAGGTaGCTGGCCCGATGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLGAHAR*LARCRR
Trigger: TCGGCGACATCGGGCCAGGCACCTGGCATGAGCTCC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCCTTGGCTCCCCAAAGTaGTGGGATTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: WALSPQSTAQRSPRSLSCLGSPK*WDYRHE
Trigger: CTCATGCCTGTAATCCCAGCACTTTGGGGAGCCAAG...GCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCACCTCCTGGAGCCTCTaGTGTGGCCACCACCGCCCC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSTSWSL*CGHHRP
Trigger: GGGGCGGTGGTGGCCACAGCAGAGGCTCCAGGAGGT...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339560.10
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGCCACGCAGAGGTGCTaGAGCTGGGTGAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLATQRC*SWVRDS
Trigger: CGAGTCCCTCACCCAGCTGCAGCACCTCTGCGTGGC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339560.10
ENST00000538517.6
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp AGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTAGGCCTCAGCCGCGATaGTCGTCATGTGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: SRIRTCSGFPAVSTTRRFRPQPR*SSCEAC
Trigger: ACAGGCTTCACATGACGAGCATCGCGGCTGAGGCCT...AAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR GCA 90 bp GATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGAGGCCTCAGCCGCGATaGTCGTCATGTGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: DQDLLRIPCRVHHTQVWERPQPR*SSCEAC
Trigger: ACAGGCTTCACATGACGAGCATCGCGGCTGAGGCCT...CTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR GCA 90 bp GTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTCTGCGAGTCTGAGCTGCTCTaGTGGGCCTCTCTAGGATCA +
Preference number: 4 (lower is better)
Translates to: VVSSVHGPAESQESELLCESELL*WASLGS
Trigger: TGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGACTC...GCAGAGCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp CCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCATGGCTTTATTGTTGCTaGCTCCATCTGTGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: PRAPGGRCLLSPRPSGVPWLYCC*LHLCWE
Trigger: CTCCCAACACAGATGGAGGCAGCAACAATAAAGCCA...TGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp TCCCTGCAATCACACGTGGCTAGGTCGCACAGGGTGCTGTTTGGTGACCCCAGTAGAGCCCCCAAAGGGTaGCTGGTCCGTGCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: SLQSHVARSHRVLFGDPSRAPKG*LVRAEC
Trigger: GCACTCAGCACGGACCAGGCACCCTTTGGGGGCTCT...ACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGCCACGTGTGATTGCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR GCA 90 bp CCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGGGTGACCCCAGTGTGTaGCTCAAGACCTCAAAATTC +
Preference number: 4 (lower is better)
Translates to: PRRARPRAPGGRCLLSPRGDPSV*LKTSKF
Trigger: GAATTTTGAGGTCTTGAGGCACACACTGGGGTCACC...CCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR GCA 90 bp AGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGTGACCCCAGTGTGTaGCTCAAGACCTCAAAATTC +
Preference number: 4 (lower is better)
Translates to: RARPRAPGGRCLLSPRPSGDPSV*LKTSKF
Trigger: GAATTTTGAGGTCTTGAGGCACACACTGGGGTCACC...GCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTAGCGTGTCTCCAGGCTaGGCGCAGGGTCGCCATGGT +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLSVSPG*AQGRHG
Trigger: ACCATGGCGACCCTGCGCCCAGCCTGGAGACACGCT...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254320.7
ENST00000671723.1
CDS-3UTR CCA 90 bp AGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGTTCCTGGAGCTaGTTGTTCTGCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SRIRTCSGFPAVSTTRRFGSSWS*LFCRER
Trigger: CCTCTCCCTGCAGAACAACCAGCTCCAGGAACTCCC...AAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp AGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCAGAGATGAGGTTGTTGTaGAGGTTGAGGGTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: RPRRARPRAPGGRCLLSPEMRLL*RLRVRR
Trigger: CCTGCGAACCCTCAACCTCCACAACAACCTCATCTC...TGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp TGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCGAGATGAGGTTGTTGTaGAGGTTGAGGGTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: WWALSPQSTAQRSPRSLSEMRLL*RLRVRR
Trigger: CCTGCGAACCCTCAACCTCCACAACAACCTCATCTC...GCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CCA 90 bp GTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCAGCTGTGTGCTCAGCTGGTTGTTGTaGAGGTACACGGACCTGAGT +
Preference number: 4 (lower is better)
Translates to: VCPARPAWSVSLEYASCVLSWLL*RYTDLS
Trigger: ACTCAGGTCCGTGTACCTCCACAACAACCAGCTGAG...CACACAGCTGGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR CCA 90 bp GGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGGCACTGTGGTCAGCTaGTTGTGGGAGAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: GSGPAPDSLPCPPHAGLGGTVVS*LWERSR
Trigger: CCTGGATCTCTCCCACAACCAGCTGACCACAGTGCC...TCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGGTGCACACGGGCGCTaGCCAGGCGGTTATAGGCCA +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLGAHGR*PGGYRP
Trigger: TGGCCTATAACCGCCTGGCCAGCGCCCGTGTGCACC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCTGAGCTCCCGCAGTTaGTCCAGGCCGGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSLSSRS*SRPARG
Trigger: GCCTCTGGCCGGCCTGGACCAACTGCGGGAGCTCAG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCTCATGCCAGGTGCCTaGCCCGATGTCGCCGACCCG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSLMPGA*PDVADP
Trigger: CGGGTCGGCGACATCGGGCCAGGCACCTGGCATGAG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCAGGCGGTCACCTCCTaGAGCCTCTGCTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLQAVTS*SLCCGH
Trigger: GTGGCCACAGCAGAGGCTCCAGGAGGTGACCGCCTG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339560.10
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGCAGGCTCGGCCACATaGCCAGCCCTGACTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLAGSAT*PALTLP
Trigger: TGGCAGAGTCAGGGCTGGCCATGTGGCCGAGCCTGC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339560.10
ENST00000672524.1
CDS-3UTR CCA 90 bp TGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGAAGGCTGTGTCTCTGTaGACAGGGACTGCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: CSGFPAVSTTRRFGSPRKKAVSL*TGTAPS
Trigger: AGAAGGCGCAGTCCCTGTCCACAGAGACACAGCCTT...CTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp GGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCTCAGTTTGGGAGCTCTaGAGGGCAGAAATGTGGATC +
Preference number: 4 (lower is better)
Translates to: GGPGEPDQGPLVGVVSSVSVWEL*RAEMWI
Trigger: GATCCACATTTCTGCCCTCCAGAGCTCCCAAACTGA...GACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp TCCCTGCAATCACACGTGGCTAGGTCGCACAGGGTGCTGTTTGGTGACCCCAGTACCAAGGGCCCCTGGTaGGCGTTGTCTCCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: SLQSHVARSHRVLFGDPSTKGPW*ALSPQS
Trigger: GGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGT...ACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGCCACGTGTGATTGCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CCA 90 bp CAATCACACGTGGCTAGGTCGCACAGGGTGCTGTTTGGTGACCCCAGTGTGTGCCAGACCAAGGGCCCCTaGTGGGCGTTGTCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: QSHVARSHRVLFGDPSVCQTKGP*WALSPQ
Trigger: CTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTG...GCACACACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGCCACGTGTGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CCA 90 bp AGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTTCTGTGTTGGGAGTTTaGGGTAGGGTGTGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: SRIRTCSGFPAVSTTRRFSVLGV*GRVCPA
Trigger: GGCGGGACACACCCTACCCCAAACTCCCAACACAGA...AAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR CCA 90 bp CTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGGCTGCCTCCATCTGTGTTaGGAGTTTGGGGTAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LRIPCRVHHTQVWEPQEGCLHLC*EFGVGC
Trigger: ACACCCTACCCCAAACTCCCAACACAGATGGAGGCA...GCCTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR CCA 90 bp GATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCTGAGGTCCAGCATCTaGAGGGCTTGGAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: DQDLLRIPCRVHHTQVWELRSSI*RAWSSC
Trigger: GCATGAGCTCCAAGCCCTCCAGATGCTGGACCTCAG...CTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CCA 90 bp GGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGTCCGTGCTGAGTGCTaGAAGGGTTTGGCTTTATTG +
Preference number: 4 (lower is better)
Translates to: GPGEPDQGPLVGVVSSVHVRAEC*KGLALL
Trigger: CAATAAAGCCAAACCCTTCCAGCACTCAGCACGGAC...GTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR TCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGGGTTCGCAGGCCACTaGGGCGGGACAGCTCATTGT +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLGFAGH*GGTAHC
Trigger: ACAATGAGCTGTCCCGCCTCAGTGGCCTGCGAACCC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGACCGGGGCAGAAACTaGGGGGCCACTGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLDRGRN*GATESF
Trigger: GAAGCTCTCAGTGGCCCCTCAGTTTCTGCCCCGGTC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254320.7
ENST00000671723.1
CDS-3UTR TCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGGAGGTACACGGACCTaGGTGCCGGCTTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLGGTRT*VPASPQ
Trigger: TTGGGGAGAAGCCGGCACTCAGGTCCGTGTACCTCC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGGCAGCCGGGTTAGCTaGTTCCCTGCCAGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSGSRVS*FPARSR
Trigger: CCTCGACCTGGCAGGGAATCAGCTAACCCGGCTGCC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGGTTGTGCGCCAGGCTaGGCTCCCGCAGTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSGCAPG*APAVGP
Trigger: TGGACCAACTGCGGGAGCTCAGCCTGGCGCACAACC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGGTGCTGCAGCTGGGTaGGGGACTCGAAGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSGAAAG*GTRRPR
Trigger: ACGAGGCCTTCGAGTCCCTCACCCAGCTGCAGCACC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339560.10
ENST00000538517.6
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp GGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACAGGTATTCAAGGCTATaGAGCTTGCTGAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GPGEPDQGPLVGVVSSVHRYSRL*SLLKVV
Trigger: CACCACCTTCAGCAAGCTGCATAGCCTTGAATACCT...GTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCAGGTATTCAAGGCTATaGAGCTTGCTGAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GGPGEPDQGPLVGVVSSVRYSRL*SLLKVV
Trigger: CACCACCTTCAGCAAGCTGCATAGCCTTGAATACCT...GACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTTGGTTGCGTTGCAGCTaGAGGGTGCGCAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLWLRCS*RVRRPV
Trigger: CACTGGCCTGCGCACCCTGCAGCTGCAACGCAACCA...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCGCAGCTGGTTGCGTTaGAGCTGCAGGGTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSRSWLR*SCRVRR
Trigger: CCTGCGCACCCTGCAGCTGCAACGCAACCAGCTGCG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGCATCCGCAGCTGGTTaGGTTGCAGCTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLASAAG*VAAAGC
Trigger: GCACCCTGCAGCTGCAACGCAACCAGCTGCGGATGC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGGAGCTCATGCCAGGTaGCTGGCCCGATGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSGAHAR*LARCRR
Trigger: TCGGCGACATCGGGCCAGGCACCTGGCATGAGCTCC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTAGGGCTTGGAGCTCATaGCAGGTGCCTGGCCCGATG +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLRAWSS*QVPGPM
Trigger: CATCGGGCCAGGCACCTGGCATGAGCTCCAAGCCCT...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGCCACGCAGAGGTGCTaGAGCTGGGTGAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSATQRC*SWVRDS
Trigger: CGAGTCCCTCACCCAGCTGCAGCACCTCTGCGTGGC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339560.10
ENST00000538517.6
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp CCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCATGGCTTTATTGTTGCTaGCTCCATCTGTGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: PGGPGEPDQGPLVGVVSSWLYCC*LHLCWE
Trigger: CTCCCAACACAGATGGAGGCAGCAACAATAAAGCCA...TGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp CCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCTGGCTTTATTGTTGCTaGCTCCATCTGTGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: PGEPDQGPLVGVVSSVHGWLYCC*LHLCWE
Trigger: CTCCCAACACAGATGGAGGCAGCAACAATAAAGCCA...GCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp TCTGAGCTGCTCTGCTGGGCCTCTCTAGGATCAGGGGCCCCCTGCCCGTGGCCCGTTTGGCTTTATTGTTaGTGCCTCCATCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SELLCWASLGSGAPCPWPVWLYC*CLHLCW
Trigger: CCAACACAGATGGAGGCAGCAACAATAAAGCCAAAC...GGGCCACGGGCAGGGGGCCCCTGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR GCA 90 bp CCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGTTTGGCTTTATTGTTaGTGCCTCCATCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: PRAPGGRCLLSPRPSGVPVWLYC*CLHLCW
Trigger: CCAACACAGATGGAGGCAGCAACAATAAAGCCAAAC...TGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCAGCGTGTCTCCAGGCTaGGCGCAGGGTCGCCATGGT +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSSVSPG*AQGRHG
Trigger: ACCATGGCGACCCTGCGCCCAGCCTGGAGACACGCT...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254320.7
ENST00000671723.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGGTGCACACGGGCGCTaGCCAGGCGGTTATAGGCCA +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSGAHGR*PGGYRP
Trigger: TGGCCTATAACCGCCTGGCCAGCGCCCGTGTGCACC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCAGTGGGCAGGCCCATaGGCAGCCGGGTTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLQWAGP*AAGLAD
Trigger: ATCAGCTAACCCGGCTGCCCATGGGCCTGCCCACTG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGCCCTGGGGACAGTGTaGCTAACCAGCCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLALGTV*LTSLCL
Trigger: CAGGCACAGGCTGGTTAGCCACACTGTCCCCAGGGC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCAGGCGGTCACCTCCTaGAGCCTCTGCTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSQAVTS*SLCCGH
Trigger: GTGGCCACAGCAGAGGCTCCAGGAGGTGACCGCCTG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339560.10
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCAGAGGTGCTGCAGCTaGGTGAGGGACTCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLQRCCS*VRDSKA
Trigger: GGCCTTCGAGTCCCTCACCCAGCTGCAGCACCTCTG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339560.10
ENST00000538517.6
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp GGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGATCTCCCCCATCAGTTTaGGAGCTCTGGAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: GSGPAPDSLPCPPHAGLGSPPSV*ELWRAE
Trigger: TTCTGCCCTCCAGAGCTCCCAAACTGATGGGGGAGA...TCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp CTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGGCGTCCGTGCTGAGTGCTaGAAGGGTTTGGCTTTATTG +
Preference number: 4 (lower is better)
Translates to: LRIPCRVHHTQVWEPQEGVRAEC*KGLALL
Trigger: CAATAAAGCCAAACCCTTCCAGCACTCAGCACGGAC...GCCTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CCA 90 bp CAATCACACGTGGCTAGGTCGCACAGGGTGCTGTTTGGTGACCCCAGTGTGTGCCCCTGCAATCACACGTaGCTAGGTCGCACAGGGTGC +
Preference number: 4 (lower is better)
Translates to: QSHVARSHRVLFGDPSVCPCNHT*LGRTGC
Trigger: GCACCCTGTGCGACCTAGCCACGTGTGATTGCAGGG...GCACACACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGCCACGTGTGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR TCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGCTGAGCGGCTCTGGTaGTGTTGTCCGGGAACACTC +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLAERLW*CCPGTL
Trigger: GAGTGTTCCCGGACAACATCACCAGAGCCGCTCAGC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGGGTTCGCAGGCCACTaGGGCGGGACAGCTCATTGT +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSGFAGH*GGTAHC
Trigger: ACAATGAGCTGTCCCGCCTCAGTGGCCTGCGAACCC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGACCGGGGCAGAAACTaGGGGGCCACTGAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSDRGRN*GATESF
Trigger: GAAGCTCTCAGTGGCCCCTCAGTTTCTGCCCCGGTC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254320.7
ENST00000671723.1
CDS-3UTR TCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGGAGGTACACGGACCTaGGTGCCGGCTTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSGGTRT*VPASPQ
Trigger: TTGGGGAGAAGCCGGCACTCAGGTCCGTGTACCTCC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCTGGGCGGCAGGTAGCTaGGCTGGTTGTTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSWAAGS*AGCWRG
Trigger: GCCTCTCCAACAACCAGCTCAGCTACCTGCCGCCCA...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGGCTATGCAGCTTGCTaGAGGTGGTGGCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLGYAAC*RWWHPG
Trigger: GCCTGGATGCCACCACCTTCAGCAAGCTGCATAGCC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGACCGGGGCAGAAACTaGGGGGCCACTGAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSDRGRN*GATESL
Trigger: CAAGCTCTCAGTGGCCCCTCAGTTTCTGCCCCGGTC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339560.10
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTCTGCTAGATTGTTCTTGTTGTaGGCCACGCAGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSPQSTAQRSPRSLSCSARLFLL*ATQRCC
Trigger: GCAGCACCTCTGCGTGGCTCACAACAAGAACAATCT...AGCAGAGCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGGGGCAGGCCAGCGTTaGTCAGCTGGTTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLGAGQR*SAGCCG
Trigger: TCCACAACAACCAGCTGAGCAACGCTGGCCTGCCCC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR GCA 90 bp GTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGAGGTATTCAAGGCTATaGAGCTTGCTGAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VGVVSSVHGPAESQESELRYSRL*SLLKVV
Trigger: CACCACCTTCAGCAAGCTGCATAGCCTTGAATACCT...CAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCGCGGTCCAGCCCATTaGCATAGAGGTGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLRGPAH*HRGAAC
Trigger: ACACGCTGCACCTCTATGGCAATGGGCTGGACCGCG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCTGGTTGCGTTGCAGCTaGAGGGTGCGCAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSWLRCS*RVRRPV
Trigger: CACTGGCCTGCGCACCCTGCAGCTGCAACGCAACCA...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGCATCCGCAGCTGGTTaGGTTGCAGCTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSASAAG*VAAAGC
Trigger: GCACCCTGCAGCTGCAACGCAACCAGCTGCGGATGC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCAGGGCTTGGAGCTCATaGCAGGTGCCTGGCCCGATG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSRAWSS*QVPGPM
Trigger: CATCGGGCCAGGCACCTGGCATGAGCTCCAAGCCCT...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTCTGCTCTTGGCTCCCCAAAGTaGTGGGATTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: LSPQSTAQRSPRSLSCSALGSPK*WDYRHE
Trigger: CTCATGCCTGTAATCCCAGCACTTTGGGGAGCCAAG...AGCAGAGCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp TGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCCAAATTCCTCCCTTCTaGAGAGGTAAACTAAGGCCC +
Preference number: 4 (lower is better)
Translates to: WWALSPQSTAQRSPRSLSQIPPF*RGKLRP
Trigger: GGGCCTTAGTTTACCTCTGCAGAAGGGAGGAATTTG...GCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp AGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACAAATTCCTCCCTTCTaGAGAGGTAAACTAAGGCCC +
Preference number: 4 (lower is better)
Translates to: RPRRARPRAPGGRCLLSPQIPPF*RGKLRP
Trigger: GGGCCTTAGTTTACCTCTGCAGAAGGGAGGAATTTG...TGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp TCCCTGCAATCACACGTGGCTAGGTCGCACAGGGTGCTGTTTGGTGACCCCAGTAGGCCTCAGCCGCGATaGTCGTCATGTGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: SLQSHVARSHRVLFGDPSRPQPR*SSCEAC
Trigger: ACAGGCTTCACATGACGAGCATCGCGGCTGAGGCCT...ACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGCCACGTGTGATTGCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR GCA 90 bp GGAGTTTGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGGTTTGGCTTTATTGTTaGTGCCTCCATCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GVWGRVCPARPAWSVSLEVWLYC*CLHLCW
Trigger: CCAACACAGATGGAGGCAGCAACAATAAAGCCAAAC...CTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR GCA 90 bp GATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCTGGTCCGTGCTGAGTaGTGGAAGGGTTTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: DQDLLRIPCRVHHTQVWELVRAE*WKGLAL
Trigger: TAAAGCCAAACCCTTCCAGCACTCAGCACGGACCAG...CTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCAGTGGGCAGGCCCATaGGCAGCCGGGTTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSQWAGP*AAGLAD
Trigger: ATCAGCTAACCCGGCTGCCCATGGGCCTGCCCACTG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTTCGAGCATCCGCAGCTaGTTGCGTTGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLSSIRS*LRCSCR
Trigger: CCTGCAGCTGCAACGCAACCAGCTGCGGATGCTCGA...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTAGCCTGTGCCTGACCTaGAGGGCTTGGAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLSLCLT*RAWSSC
Trigger: GCATGAGCTCCAAGCCCTCCAGGTCAGGCACAGGCT...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGCCCTGGGGACAGTGTaGCTAACCAGCCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSALGTV*LTSLCL
Trigger: CAGGCACAGGCTGGTTAGCCACACTGTCCCCAGGGC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp AGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGCTGTGTTGCCAGGCTaGTCTCAAACCCATAGCCTA +
Preference number: 4 (lower is better)
Translates to: SRIRTCSGFPAVSTTRRFAVLPG*SQTHSL
Trigger: TAGGCTATGGGTTTGAGACCAGCCTGGCAACACAGC...AAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCAGAGGTGCTGCAGCTaGGTGAGGGACTCGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSQRCCS*VRDSKA
Trigger: GGCCTTCGAGTCCCTCACCCAGCTGCAGCACCTCTG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339560.10
ENST00000538517.6
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTCTGCTTGGAGGGCAGAAATGTaGATCTCTTGCAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LSPQSTAQRSPRSLSCSAWRAEM*ISCRWA
Trigger: TGCCCACCTGCAAGAGATCCACATTTCTGCCCTCCA...AGCAGAGCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp TCCCTGCAATCACACGTGGCTAGGTCGCACAGGGTGCTGTTTGGTGACCCCAGTTCTGAGCTGCTCTGCTaGGCCTCTCTAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: SLQSHVARSHRVLFGDPSSELLC*ASLGSG
Trigger: CCCTGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGA...ACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGCCACGTGTGATTGCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CCA 90 bp GATGCTCGTCATGTGAAGCCTGTTGGCCCTGCACAGAGAGGCGGTCATGACCCTTCTGTGTTGGGAGTTTaGGGTAGGGTGTGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: DARHVKPVGPAQRGGHDPSVLGV*GRVCPA
Trigger: GGCGGGACACACCCTACCCCAAACTCCCAACACAGA...AGGGTCATGACCGCCTCTCTGTGCAGGGCCAACAGGCTTCACATGACGAGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CCA 90 bp GGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGATGCCTCCATCTGTGTTaGGAGTTTGGGGTAGGGTGT +
Preference number: 4 (lower is better)
Translates to: GSGPAPDSLPCPPHAGLGCLHLC*EFGVGC
Trigger: ACACCCTACCCCAAACTCCCAACACAGATGGAGGCA...TCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR TCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGCTGAGCGGCTCTGGTaGTGTTGTCCGGGAACACTC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSAERLW*CCPGTL
Trigger: GAGTGTTCCCGGACAACATCACCAGAGCCGCTCAGC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCTGCAGGGAGAGGTGCTaGGCGGCTCTGGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSCRERC*AALVML
Trigger: CAACATCACCAGAGCCGCTCAGCACCTCTCCCTGCA...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGGCTATGCAGCTTGCTaGAGGTGGTGGCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSGYAAC*RWWHPG
Trigger: GCCTGGATGCCACCACCTTCAGCAAGCTGCATAGCC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTACTGAGAGCTTGTTGTaGGCCACGCAGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLTESLL*ATQRCC
Trigger: GCAGCACCTCTGCGTGGCTCACAACAAGCTCTCAGT...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339560.10
ENST00000672524.1
CDS-3UTR TCA 90 bp AGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGGCACCTTGGAGATaGGATTGTTCTTGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: SRIRTCSGFPAVSTTRRFGAPWR*DCSCCE
Trigger: CTCACAACAAGAACAATCTCATCTCCAAGGTGCCCC...AAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR TCA 90 bp TCACCCTCGGGGCACCTGAGGAAGAGGGCACGCAGGCGGGGTGTGCTGAGGAAGAGACAGGTCCCCACTTaGTTAAATGAGTCAGTCATT +
Preference number: 4 (lower is better)
Translates to: SPSGHLRKRARRRGVLRKRQVPT*LNESVI
Trigger: AATGACTGACTCATTTAATCAAGTGGGGACCTGTCT...CTTCCTCAGCACACCCCGCCTGCGTGCCCTCTTCCTCAGGTGCCCCGAGGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR TCA 90 bp GGAGTTTGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGAGACAGGTCCCCACTTaGTTAAATGAGTCAGTCATT +
Preference number: 4 (lower is better)
Translates to: GVWGRVCPARPAWSVSLERQVPT*LNESVI
Trigger: AATGACTGACTCATTTAATCAAGTGGGGACCTGTCT...CTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGTACACGGACCTGAGTaGCGGCTTCTCCCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLVHGPE*RLLPKG
Trigger: ACCTTTGGGGAGAAGCCGGCACTCAGGTCCGTGTAC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCGCGGTCCAGCCCATTaGCATAGAGGTGCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSRGPAH*HRGAAC
Trigger: ACACGCTGCACCTCTATGGCAATGGGCTGGACCGCG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCTGGCTAACCAGCCTGTaGCTGACCTGGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSWLTSL*LTWRAW
Trigger: CCAAGCCCTCCAGGTCAGGCACAGGCTGGTTAGCCA...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp GATGCTCGTCATGTGAAGCCTGTTGGCCCTGCACAGAGAGGCGGTCATGACCCTGGGACTACAGGCATGTaGCACCACGCTTGGCTATGT +
Preference number: 4 (lower is better)
Translates to: DARHVKPVGPAQRGGHDPGTTGM*HHAWLC
Trigger: ACATAGCCAAGCGTGGTGGCACATGCCTGTAGTCCC...AGGGTCATGACCGCCTCTCTGTGCAGGGCCAACAGGCTTCACATGACGAGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp GACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGTTTGGCTTTATTGTTaGTGCCTCCATCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: DLLRIPCRVHHTQVWEPQVWLYC*CLHLCW
Trigger: CCAACACAGATGGAGGCAGCAACAATAAAGCCAAAC...CTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR GCA 90 bp GTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCAGCTGTGTGGTTTGGCTTTATTGTTaGTGCCTCCATCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: VCPARPAWSVSLEYASCVVWLYC*CLHLCW
Trigger: CCAACACAGATGGAGGCAGCAACAATAAAGCCAAAC...CACACAGCTGGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGGGAGTTCCTGGAGCTaGTTGTTCTGCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLGSSWS*LFCRER
Trigger: CCTCTCCCTGCAGAACAACCAGCTCCAGGAACTCCC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGGCACTGTGGTCAGCTaGTTGTGGGAGAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLGTVVS*LWERSR
Trigger: CCTGGATCTCTCCCACAACCAGCTGACCACAGTGCC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCTCGAGCATCCGCAGCTaGTTGCGTTGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSSSIRS*LRCSCR
Trigger: CCTGCAGCTGCAACGCAACCAGCTGCGGATGCTCGA...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCAGCCTGTGCCTGACCTaGAGGGCTTGGAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSSLCLT*RAWSSC
Trigger: GCATGAGCTCCAAGCCCTCCAGGTCAGGCACAGGCT...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGGGGCACCTTGGAGATaGGATTGTTCTGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLGAPWR*DCSAGG
Trigger: TCCACCTGCAGAACAATCTCATCTCCAAGGTGCCCC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCACTGAGAGCTTGTTGTaGGCCACGCAGAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSTESLL*ATQRCC
Trigger: GCAGCACCTCTGCGTGGCTCACAACAAGCTCTCAGT...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339560.10
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTAAACTGAGGGGCCACTaGGAGCTTGTTGTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLKLRGH*ELVVSH
Trigger: GTGGCTCACAACAAGCTCTCAGTGGCCCCTCAGTTT...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339560.10
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCACAGCTCATTGTGGCTaGGGTCCAGCATCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSTAHCG*GPASGQ
Trigger: CTGCCCAGATGCTGGACCTCAGCCACAATGAGCTGT...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGTACACGGACCTGAGTaGCGGCTTCTCCCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSVHGPE*RLLPKG
Trigger: ACCTTTGGGGAGAAGCCGGCACTCAGGTCCGTGTAC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCCGATCACGGCTCATTaGAGCCTCAAACTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLPITAH*SLKLLG
Trigger: GCCCAGAAGTTTGAGGCTGCAATGAGCCGTGATCGG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGGGAGTTCCTGGAGCTaGTTGTTCTGCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSGSSWS*LFCRER
Trigger: CCTCTCCCTGCAGAACAACCAGCTCCAGGAACTCCC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTTCTCCATCACTTGGTTaGCAGCCAGATCCGCGACAC +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLSPSLG*QPDPRH
Trigger: GTGTCGCGGATCTGGCTGCCAACCAAGTGATGGAGA...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCCAGCGTTGCTCAGCTaGTTGTTGTGGAGGTACACG +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLPALLS*LLWRYT
Trigger: CGTGTACCTCCACAACAACCAGCTGAGCAACGCTGG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGGCACTGTGGTCAGCTaGTTGTGGGAGAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSGTVVS*LWERSR
Trigger: CCTGGATCTCTCCCACAACCAGCTGACCACAGTGCC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCCTGAGCTCCCCAGCTaGTTGTGCTGCAGCAACAAA +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLPELPS*LCCSNK
Trigger: TTTGTTGCTGCAGCACAACCAGCTGGGGAGCTCAGG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCTCATGTGAAGCCTGTTaGCCCTGCACAGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSSCEAC*PCTERR
Trigger: CCGCCTCTCTGTGCAGGGCCAACAGGCTTCACATGA...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR TCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGGGGCACCTTGGAGATaGGATTGTTCTGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSGAPWR*DCSAGG
Trigger: TCCACCTGCAGAACAATCTCATCTCCAAGGTGCCCC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCTCTCGCCCAAGCTGCTaGCCAGGACTTCCTAATGGA +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSSRPSC*PGLPNG
Trigger: TCCATTAGGAAGTCCTGGTCAGCAGCTTGGGCGAGA...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339560.10
ENST00000672524.1
CDS-3UTR TCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCAAACTGAGGGGCCACTaGGAGCTTGTTGTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSKLRGH*ELVVSH
Trigger: GTGGCTCACAACAAGCTCTCAGTGGCCCCTCAGTTT...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339560.10
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGAGATGAGATTGTTCTaGAGGTGGAGCCGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLEMRLF*RWSRSS
Trigger: ACTCGAGCGGCTCCACCTGCAGAACAATCTCATCTC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCAGGGTCTTGCTGTGTTaGCAGGCTGGTCTCAAACCC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSRVLLC*QAGLKP
Trigger: GGGTTTGAGACCAGCCTGGCAACACAGCAAGACCCT...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGGGACTACAGGCATGTaGCACCACGCTTGGCTATGT +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSGTTGM*HHAWLC
Trigger: ACATAGCCAAGCGTGGTGGCACATGCCTGTAGTCCC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCCGATCACGGCTCATTaGAGCCTCAAACTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSPITAH*SLKLLG
Trigger: GCCCAGAAGTTTGAGGCTGCAATGAGCCGTGATCGG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGAGATGAGGTTGTTGTaGAGGTTGAGGGTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLEMRLL*RLRVRR
Trigger: CCTGCGAACCCTCAACCTCCACAACAACCTCATCTC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCTCTCCATCACTTGGTTaGCAGCCAGATCCGCGACAC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSSPSLG*QPDPRH
Trigger: GTGTCGCGGATCTGGCTGCCAACCAAGTGATGGAGA...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTAAGATCTCCATCACTTaGTTGGCAGCCAGATCCGCG +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLKISIT*LAARSA
Trigger: CGCGGATCTGGCTGCCAACCAAGTGATGGAGATCTT...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCTCAGCTGGTTGTTGTaGAGGTACACGGACCTGAGT +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLLSWLL*RYTDLS
Trigger: ACTCAGGTCCGTGTACCTCCACAACAACCAGCTGAG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCCAGCGTTGCTCAGCTaGTTGTTGTGGAGGTACACG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSPALLS*LLWRYT
Trigger: CGTGTACCTCCACAACAACCAGCTGAGCAACGCTGG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCCTGAGCTCCCCAGCTaGTTGTGCTGCAGCAACAAA +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSPELPS*LCCSNK
Trigger: TTTGTTGCTGCAGCACAACCAGCTGGGGAGCTCAGG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCTGGATCTCTTGCAGGTaGGCAGTAACTGGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSWISCR*AVTGAR
Trigger: CCTTGCCCCAGTTACTGCCCACCTGCAAGAGATCCA...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGAGATGAGATTGTTCTaGAGGTGGAGCCGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSEMRLF*RWSRSS
Trigger: ACTCGAGCGGCTCCACCTGCAGAACAATCTCATCTC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCTTGGCTCCCCAAAGTaGTGGGATTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSLGSPK*WDYRHE
Trigger: CTCATGCCTGTAATCCCAGCACTTTGGGGAGCCAAG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCTAAAGCGATTCTCCTaGCTTGGCTCCCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSLKRFS*LGSPKC
Trigger: GCACTTTGGGGAGCCAAGGCAGGAGAATCGCTTTAG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCAACCACCCCATCTCTaGTTTCGTAACCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSQPPHL*FRNLSQ
Trigger: CTGGCTGAGGTTACGAAAGCAGAGATGGGGTGGTTG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339560.10
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGAGATGAGGTTGTTGTaGAGGTTGAGGGTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSEMRLL*RLRVRR
Trigger: CCTGCGAACCCTCAACCTCCACAACAACCTCATCTC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCAAGATCTCCATCACTTaGTTGGCAGCCAGATCCGCG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSKISIT*LAARSA
Trigger: CGCGGATCTGGCTGCCAACCAAGTGATGGAGATCTT...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCTCAGCTGGTTGTTGTaGAGGTACACGGACCTGAGT +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSLSWLL*RYTDLS
Trigger: ACTCAGGTCCGTGTACCTCCACAACAACCAGCTGAG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR CCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGCTGTGTTGCCAGGCTaGTCTCAAACCCATAGCCTA +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSAVLPG*SQTHSL
Trigger: TAGGCTATGGGTTTGAGACCAGCCTGGCAACACAGC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
3UTR CAA 72 bp TGCAATCACACGTGGCTAGGTCGCACAGGGTGCTGTTaGGTGACCCCAGTGTGTGCCTCAAGACCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: CNHTWLGRTGCC*VTPVCASRPQN
Trigger: ATTTTGAGGTCTTGAGGCACACACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGCCACGTGTGATTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTAGGTATTCAAGGCTATaGAGCTTGCTGAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLRYSRL*SLLKVV
Trigger: CACCACCTTCAGCAAGCTGCATAGCCTTGAATACCT...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR GCA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTTGGCTTTATTGTTGCTaGCTCCATCTGTGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLWLYCC*LHLCWE
Trigger: CTCCCAACACAGATGGAGGCAGCAACAATAAAGCCA...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR GCA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCAGGTATTCAAGGCTATaGAGCTTGCTGAAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSRYSRL*SLLKVV
Trigger: CACCACCTTCAGCAAGCTGCATAGCCTTGAATACCT...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS CCA 90 bp GGTGTGGCGACCAGGTCACGGGCACCCAGCGCGGCCACGTGGTTGTaGGGCAGCACCAGGGCACGCAGGCGGCGGGGCAGGGCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: GVATRSRAPSAATWL*GSTRARRRRGRAGG
Trigger: GCCTCCAGCCCTGCCCCGCCGCCTGCGTGCCCTGGTGCTGCCCCACAACCACGTGGCCGCGCTGGGTGCCCGTGACCTGGTCGCCACACC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS CCA 90 bp AGGCCCGGTGTGGCGACCAGGTCACGGGCACCCAGCGCGGCCACGTaGTTGTGGGGCAGCACCAGGGCACGCAGGCGGCGGGGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: RPGVATRSRAPSAAT*LWGSTRARRRRGRA
Trigger: AGCCCTGCCCCGCCGCCTGCGTGCCCTGGTGCTGCCCCACAACCACGTGGCCGCGCTGGGTGCCCGTGACCTGGTCGCCACACCGGGCCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS TCA 90 bp TGCCTGGCCCGATGTCGCCGACCCGGAGCCGGTTGTGCGCCAGGCTaGGCTCCCGCAGTTGGTCCAGGCCGGCCAGAGGCTCGGGCTCGA +
Preference number: 5 (lower is better)
Translates to: CLARCRRPGAGCAPG*APAVGPGRPEARAR
Trigger: TCGAGCCCGAGCCTCTGGCCGGCCTGGACCAACTGCGGGAGCTCAGCCTGGCGCACAACCGGCTCCGGGTCGGCGACATCGGGCCAGGCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000587954.1
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672348.1
ENST00000672449.1
ENST00000672524.1
CDS CCA 90 bp TCGCCGACCCGGAGCCGGTTGTGCGCCAGGCTGAGCTCCCGCAGTTaGTCCAGGCCGGCCAGAGGCTCGGGCTCGAGCATCCGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SPTRSRLCARLSSRS*SRPARGSGSSIRSW
Trigger: CCAGCTGCGGATGCTCGAGCCCGAGCCTCTGGCCGGCCTGGACCAACTGCGGGAGCTCAGCCTGGCGCACAACCGGCTCCGGGTCGGCGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000587954.1
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672348.1
ENST00000672449.1
ENST00000672524.1
CDS TCA 90 bp AGGGTGCGCAGGCCAGTGGGCAGGCCCATGGGCAGCCGGGTTAGCTaGTTCCCTGCCAGGTCGAGGCTGCGCAGGGCACGCAACCGGCGG +
Preference number: 5 (lower is better)
Translates to: RVRRPVGRPMGSRVS*FPARSRLRRARNRR
Trigger: CCGCCGGTTGCGTGCCCTGCGCAGCCTCGACCTGGCAGGGAATCAGCTAACCCGGCTGCCCATGGGCCTGCCCACTGGCCTGCGCACCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS GCA 90 bp GGCCCATGGGCAGCCGGGTTAGCTGATTCCCTGCCAGGTCGAGGCTaGGCAGGGCACGCAACCGGCGGAAGGCCCGGTGGTGCACACGGG +
Preference number: 5 (lower is better)
Translates to: GPWAAGLADSLPGRG*AGHATGGRPGGAHG
Trigger: CCCGTGTGCACCACCGGGCCTTCCGCCGGTTGCGTGCCCTGCGCAGCCTCGACCTGGCAGGGAATCAGCTAACCCGGCTGCCCATGGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS GCA 90 bp GGTCCAGGCCGGCCAGAGGCTCGGGCTCGAGCATCCGCAGCTGGTTaGGTTGCAGCTGCAGGGTGCGCAGGCCAGTGGGCAGGCCCATGG +
Preference number: 5 (lower is better)
Translates to: GPGRPEARARASAAG*VAAAGCAGQWAGPW
Trigger: CCATGGGCCTGCCCACTGGCCTGCGCACCCTGCAGCTGCAACGCAACCAGCTGCGGATGCTCGAGCCCGAGCCTCTGGCCGGCCTGGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS GCA 90 bp TCATGCCAGGTGCCTGGCCCGATGTCGCCGACCCGGAGCCGGTTGTaGGCCAGGCTGAGCTCCCGCAGTTGGTCCAGGCCGGCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: SCQVPGPMSPTRSRL*ARLSSRSWSRPARG
Trigger: GCCTCTGGCCGGCCTGGACCAACTGCGGGAGCTCAGCCTGGCGCACAACCGGCTCCGGGTCGGCGACATCGGGCCAGGCACCTGGCATGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000587954.1
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672348.1
ENST00000672449.1
ENST00000672524.1
CDS-3UTR CAA 90 bp GCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGACCGACCCGGAGCCGGTaGTGCGCCAGGCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: ARPRAPGGRCLLSPRPSGPTRSR*CARLSS
Trigger: GGAGCTCAGCCTGGCGCACAACCGGCTCCGGGTCGG...TCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp TCTGAGCTGCTCTGCTGGGCCTCTCTAGGATCAGGGGCCCCCTGCCCGTGGCCCCCGACCCGGAGCCGGTaGTGCGCCAGGCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SELLCWASLGSGAPCPWPPTRSR*CARLSS
Trigger: GGAGCTCAGCCTGGCGCACAACCGGCTCCGGGTCGG...GGGCCACGGGCAGGGGGCCCCTGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS GCA 90 bp GCCAGAGGCTCGGGCTCGAGCATCCGCAGCTGGTTGCGTTGCAGCTaGAGGGTGCGCAGGCCAGTGGGCAGGCCCATGGGCAGCCGGGTT +
Preference number: 5 (lower is better)
Translates to: ARGSGSSIRSWLRCS*RVRRPVGRPMGSRV
Trigger: AACCCGGCTGCCCATGGGCCTGCCCACTGGCCTGCGCACCCTGCAGCTGCAACGCAACCAGCTGCGGATGCTCGAGCCCGAGCCTCTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS CCA 90 bp AGTTGGTCCAGGCCGGCCAGAGGCTCGGGCTCGAGCATCCGCAGCTaGTTGCGTTGCAGCTGCAGGGTGCGCAGGCCAGTGGGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: SWSRPARGSGSSIRS*LRCSCRVRRPVGRP
Trigger: GGGCCTGCCCACTGGCCTGCGCACCCTGCAGCTGCAACGCAACCAGCTGCGGATGCTCGAGCCCGAGCCTCTGGCCGGCCTGGACCAACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS-3UTR CAA 90 bp CCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAAGCGCGGCCACGTGGTaGTGGGGCAGCACCAGGGCA +
Preference number: 5 (lower is better)
Translates to: PRAPGGRCLLSPRPSGVPSAATW*WGSTRA
Trigger: TGCCCTGGTGCTGCCCCACAACCACGTGGCCGCGCT...TGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp TGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCCCGACCCGGAGCCGGTaGTGCGCCAGGCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: WGRVCPARPAWSVSLEYAPTRSR*CARLSS
Trigger: GGAGCTCAGCCTGGCGCACAACCGGCTCCGGGTCGG...GGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp GGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACCCGACCCGGAGCCGGTaGTGCGCCAGGCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: GPGEPDQGPLVGVVSSVHPTRSR*CARLSS
Trigger: GGAGCTCAGCCTGGCGCACAACCGGCTCCGGGTCGG...GTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp CAGCCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCGGCCCCTGGTGGGCGTaGTCTCCTCAGTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: QPWRPRRARPRAPGGRCLGPWWA*SPQSTA
Trigger: GGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCC...GAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS CCA 90 bp CAGCCTGTGCCTGACCTGGAGGGCTTGGAGCTCATGCCAGGTGCCTaGCCCGATGTCGCCGACCCGGAGCCGGTTGTGCGCCAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: QPVPDLEGLELMPGA*PDVADPEPVVRQAE
Trigger: CTCAGCCTGGCGCACAACCGGCTCCGGGTCGGCGACATCGGGCCAGGCACCTGGCATGAGCTCCAAGCCCTCCAGGTCAGGCACAGGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672524.1
CDS-3UTR CAA 90 bp GCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGAGCGCGGCCACGTGGTaGTGGGGCAGCACCAGGGCA +
Preference number: 5 (lower is better)
Translates to: AQESQTKGPWWALSPQSTSAATW*WGSTRA
Trigger: TGCCCTGGTGCTGCCCCACAACCACGTGGCCGCGCT...CGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp GGAGTTTGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGGCTGAGCTCCCGCAGTaGGTCCAGGCCGGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: GVWGRVCPARPAWSVSLEAELPQ*VQAGQR
Trigger: CCTCTGGCCGGCCTGGACCAACTGCGGGAGCTCAGC...CTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp CCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGCTGAGCTCCCGCAGTaGGTCCAGGCCGGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: PLVGVVSSVHGPAESQESAELPQ*VQAGQR
Trigger: CCTCTGGCCGGCCTGGACCAACTGCGGGAGCTCAGC...AGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp AGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCGCTGAGCTCCCGCAGTaGGTCCAGGCCGGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: RRARPRAPGGRCLLSPRPAELPQ*VQAGQR
Trigger: CCTCTGGCCGGCCTGGACCAACTGCGGGAGCTCAGC...GGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp CCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGCTGAGCTCCCGCAGTaGGTCCAGGCCGGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: PGGPGEPDQGPLVGVVSSAELPQ*VQAGQR
Trigger: CCTCTGGCCGGCCTGGACCAACTGCGGGAGCTCAGC...TGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp GGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCTGAGCTCCCGCAGTaGGTCCAGGCCGGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: GEPDQGPLVGVVSSVHGPAELPQ*VQAGQR
Trigger: CCTCTGGCCGGCCTGGACCAACTGCGGGAGCTCAGC...TGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp GTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCAGCTGTGTGCCGACCCGGAGCCGGTaGTGCGCCAGGCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: VCPARPAWSVSLEYASCVPTRSR*CARLSS
Trigger: GGAGCTCAGCCTGGCGCACAACCGGCTCCGGGTCGG...CACACAGCTGGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp CCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCACGTGGCCGATGCGGTaGCCCTCGAGGTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PWRPRRARPRAPGGRCLLTWPMR*PSRCSS
Trigger: GGAGCTGCACCTCGAGGGCAACCGCATCGGCCACGT...GAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp AGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGCCCCTGGTGGGCGTaGTCTCCTCAGTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: RARPRAPGGRCLLSPRPSGPWWA*SPQSTA
Trigger: GGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCC...GCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp TGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCGGCCCCTGGTGGGCGTaGTCTCCTCAGTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: WGRVCPARPAWSVSLEYAGPWWA*SPQSTA
Trigger: GGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCC...GGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS GCA 90 bp GCTCGGGCTCGAGCATCCGCAGCTGGTTGCGTTGCAGCTGCAGGGTaGGCAGGCCAGTGGGCAGGCCCATGGGCAGCCGGGTTAGCTGAT +
Preference number: 5 (lower is better)
Translates to: ARARASAAGCVAAAG*AGQWAGPWAAGLAD
Trigger: ATCAGCTAACCCGGCTGCCCATGGGCCTGCCCACTGGCCTGCGCACCCTGCAGCTGCAACGCAACCAGCTGCGGATGCTCGAGCCCGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS CCA 90 bp GGTTGCGTTGCAGCTGCAGGGTGCGCAGGCCAGTGGGCAGGCCCATaGGCAGCCGGGTTAGCTGATTCCCTGCCAGGTCGAGGCTGCGCA +
Preference number: 5 (lower is better)
Translates to: GCVAAAGCAGQWAGP*AAGLADSLPGRGCA
Trigger: TGCGCAGCCTCGACCTGGCAGGGAATCAGCTAACCCGGCTGCCCATGGGCCTGCCCACTGGCCTGCGCACCCTGCAGCTGCAACGCAACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS-3UTR CAA 90 bp CCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCGGGGGCAGGCCAGCGTaGCTCAGCTGGTTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: PWRPRRARPRAPGGRCLLGGRPA*LSWLLW
Trigger: CCACAACAACCAGCTGAGCAACGCTGGCCTGCCCCC...GAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR CAA 90 bp GTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCAGCTGTGTGAGCGCGGCCACGTGGTaGTGGGGCAGCACCAGGGCA +
Preference number: 5 (lower is better)
Translates to: VCPARPAWSVSLEYASCVSAATW*WGSTRA
Trigger: TGCCCTGGTGCTGCCCCACAACCACGTGGCCGCGCT...CACACAGCTGGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp CCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCACCGCAGCTGGTTGCGTaGCAGCTGCAGGGTGCGCAG +
Preference number: 5 (lower is better)
Translates to: PGGPGEPDQGPLVGVVSSPQLVA*QLQGAQ
Trigger: CTGCGCACCCTGCAGCTGCAACGCAACCAGCTGCGG...TGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp GGCAGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGACGTGGCCGATGCGGTaGCCCTCGAGGTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GSRIRTCSGFPAVSTTRRTWPMR*PSRCSS
Trigger: GGAGCTGCACCTCGAGGGCAACCGCATCGGCCACGT...CCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR CAA 90 bp TGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCGGCCCCTGGTGGGCGTaGTCTCCTCAGTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: WWALSPQSTAQRSPRSLSGPWWA*SPQSTA
Trigger: GGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCC...GCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS GCA 90 bp GTGTGGCTAACCAGCCTGTGCCTGACCTGGAGGGCTTGGAGCTCATaGCAGGTGCCTGGCCCGATGTCGCCGACCCGGAGCCGGTTGTGC +
Preference number: 5 (lower is better)
Translates to: VWLTSLCLTWRAWSS*QVPGPMSPTRSRLC
Trigger: GCACAACCGGCTCCGGGTCGGCGACATCGGGCCAGGCACCTGGCATGAGCTCCAAGCCCTCCAGGTCAGGCACAGGCTGGTTAGCCACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672524.1
CDS CCA 90 bp GCATCCGCAGCTGGTTGCGTTGCAGCTGCAGGGTGCGCAGGCCAGTaGGCAGGCCCATGGGCAGCCGGGTTAGCTGATTCCCTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: ASAAGCVAAAGCAGQ*AGPWAAGLADSLPG
Trigger: ACCTGGCAGGGAATCAGCTAACCCGGCTGCCCATGGGCCTGCCCACTGGCCTGCGCACCCTGCAGCTGCAACGCAACCAGCTGCGGATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCCCGCAGCTGGTTGCGTaGCAGCTGCAGGGTGCGCAG +
Preference number: 5 (lower is better)
Translates to: WWALSPQSTAQRSPRSLSPQLVA*QLQGAQ
Trigger: CTGCGCACCCTGCAGCTGCAACGCAACCAGCTGCGG...GCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp CCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAAGCATCCGCAGCTGGTaGCGTTGCAGCTGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: PRAPGGRCLLSPRPSGVPSIRSW*RCSCRV
Trigger: CACCCTGCAGCTGCAACGCAACCAGCTGCGGATGCT...TGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp CCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCTGACCTGGAGGGCTaGGAGCTCATGCCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: PGEPDQGPLVGVVSSVHGPDLEG*ELMPGA
Trigger: GGCACCTGGCATGAGCTCCAAGCCCTCCAGGTCAGG...GCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CAA 90 bp AGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCCCTGACCTGGAGGGCTaGGAGCTCATGCCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: RARPRAPGGRCLLSPRPSPDLEG*ELMPGA
Trigger: GGCACCTGGCATGAGCTCCAAGCCCTCCAGGTCAGG...GCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CAA 90 bp CAGCCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCGGGTGGGCCTCCCCATaGAAAGTGTGGGAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: QPWRPRRARPRAPGGRCLGWASP*KVWELP
Trigger: AGGGAGCTCCCACACTTTCAATGGGGAGGCCCACCC...GAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CAA 90 bp AGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCAACGTGGCCGATGCGGTaGCCCTCGAGGTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RPRRARPRAPGGRCLLSPTWPMR*PSRCSS
Trigger: GGAGCTGCACCTCGAGGGCAACCGCATCGGCCACGT...TGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp AGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCCCCCAGCTGGACTGGTaGTGGGGAGGAGTCCGTGGA +
Preference number: 5 (lower is better)
Translates to: RRARPRAPGGRCLLSPRPPQLDW*WGGVRG
Trigger: TCCACGGACTCCTCCCCACAACCAGTCCAGCTGGGG...GGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CAA 90 bp TGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCCCCCAGCTGGACTGGTaGTGGGGAGGAGTCCGTGGA +
Preference number: 5 (lower is better)
Translates to: WGRVCPARPAWSVSLEYAPQLDW*WGGVRG
Trigger: TCCACGGACTCCTCCCCACAACCAGTCCAGCTGGGG...GGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CAA 90 bp CCTCGGGGCCCACGTGGCCGATGCGGTTGCCCTCGAGGTGCAGCTCCTCTAGGGAGGTTGTTGTGGAGGTaGAGGGTTCGCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: PRGPRGRCGCPRGAAPLGRLLWR*RVRRPL
Trigger: CAGTGGCCTGCGAACCCTCAACCTCCACAACAACCT...CCCTAGAGGAGCTGCACCTCGAGGGCAACCGCATCGGCCACGTGGGCCCCGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CAA 90 bp AGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCGTAGAGCTCACGGAGTaGAGTCTGGCGGCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: RRARPRAPGGRCLLSPRPVELTE*SLAAQG
Trigger: GCCCTGAGCCGCCAGACTCAACTCCGTGAGCTCTAC...GGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp AGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCAGCATCCGCAGCTGGTaGCGTTGCAGCTGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: RARPRAPGGRCLLSPRPSSIRSW*RCSCRV
Trigger: CACCCTGCAGCTGCAACGCAACCAGCTGCGGATGCT...GCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp TGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCAGCATCCGCAGCTGGTaGCGTTGCAGCTGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: WGRVCPARPAWSVSLEYASIRSW*RCSCRV
Trigger: CACCCTGCAGCTGCAACGCAACCAGCTGCGGATGCT...GGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp GGGAGGCAGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGGGGTGGGCCTCCCCATaGAAAGTGTGGGAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: GRQPDQDLLRIPCRVHHTGWASP*KVWELP
Trigger: AGGGAGCTCCCACACTTTCAATGGGGAGGCCCACCC...CGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CAA 90 bp GAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCCAGCATCTGGAGGGCTaGGAGCTCATGCCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: EAQESQTKGPWWALSPQSQHLEG*ELMPGA
Trigger: GGCACCTGGCATGAGCTCCAAGCCCTCCAGATGCTG...GGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587954.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp GCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGCAGCATCTGGAGGGCTaGGAGCTCATGCCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: AQESQTKGPWWALSPQSTQHLEG*ELMPGA
Trigger: GGCACCTGGCATGAGCTCCAAGCCCTCCAGATGCTG...CGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587954.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp AGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGCGGCTCTGGTGATGTaGTCCGGGAACACTCGAAGG +
Preference number: 5 (lower is better)
Translates to: RARPRAPGGRCLLSPRPSAALVM*SGNTRR
Trigger: CCTTCGAGTGTTCCCGGACAACATCACCAGAGCCGC...GCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp TGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCGCGGCTCTGGTGATGTaGTCCGGGAACACTCGAAGG +
Preference number: 5 (lower is better)
Translates to: WGRVCPARPAWSVSLEYAAALVM*SGNTRR
Trigger: CCTTCGAGTGTTCCCGGACAACATCACCAGAGCCGC...GGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp CAGCCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCAGGTTGTTGTGGAGGTaGAGGGTTCGCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: QPWRPRRARPRAPGGRCLRLLWR*RVRRPL
Trigger: CAGTGGCCTGCGAACCCTCAACCTCCACAACAACCT...GAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp TGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCGTAGAGCTCACGGAGTaGAGTCTGGCGGCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: WALSPQSTAQRSPRSLSCVELTE*SLAAQG
Trigger: GCCCTGAGCCGCCAGACTCAACTCCGTGAGCTCTAC...GCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp AAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGCTGCCTCCATCTGTGTaGGGAGTTTGGGGTAGGGTG +
Preference number: 5 (lower is better)
Translates to: KGPWWALSPQSTAQRSPRLPPSV*GVWGRV
Trigger: CACCCTACCCCAAACTCCCAACACAGATGGAGGCAG...CCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp TGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCCAGCATCTGGAGGGCTaGGAGCTCATGCCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: WALSPQSTAQRSPRSLSCQHLEG*ELMPGA
Trigger: GGCACCTGGCATGAGCTCCAAGCCCTCCAGATGCTG...GCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587954.1
ENST00000672348.1
ENST00000672449.1
CDS GCA 90 bp CGGCAACAGCAGGAGCAGCAGCAGGCTCGGCCACTGGTATGGTGGTaGACACCCACAGTCCCAGGTACTCAGGAGGCCAAGGCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: RQQQEQQQARPLVWW*TPTVPGTQEAKAGG
Trigger: TCCTCCTGCCTTGGCCTCCTGAGTACCTGGGACTGTGGGTGTGCACCACCATACCAGTGGCCGAGCCTGCTGCTGCTCCTGCTGTTGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587458.1
ENST00000673052.1
CDS-3UTR CAA 90 bp CCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAATCTCCATCACTTGGTaGGCAGCCAGATCCGCGACA +
Preference number: 5 (lower is better)
Translates to: PRAPGGRCLLSPRPSGVPISITW*AARSAT
Trigger: TGTCGCGGATCTGGCTGCCAACCAAGTGATGGAGAT...TGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR CAA 90 bp CCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCGAAGATCTCCATCACTaGGTTGGCAGCCAGATCCGC +
Preference number: 5 (lower is better)
Translates to: PWRPRRARPRAPGGRCLLEDLHH*VGSQIR
Trigger: GCGGATCTGGCTGCCAACCAAGTGATGGAGATCTTC...GAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR CAA 90 bp CCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCTTGCTCAGCTGGTTGTaGTGGAGGTACACGGACCTG +
Preference number: 5 (lower is better)
Translates to: PWRPRRARPRAPGGRCLLLLSWL*WRYTDL
Trigger: CAGGTCCGTGTACCTCCACAACAACCAGCTGAGCAA...GAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR CAA 90 bp CCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGCGTTGCTCAGCTGGTaGTTGTGGAGGTACACGGAC +
Preference number: 5 (lower is better)
Translates to: PGGPGEPDQGPLVGVVSSALLSW*LWRYTD
Trigger: GTCCGTGTACCTCCACAACAACCAGCTGAGCAACGC...TGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR CAA 90 bp TGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCCCCAGGAAGGTAGAGCTCACGGAGTaGAGTCTGGCGGCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: CSGFPAVSTTRRFGSPRKVELTE*SLAAQG
Trigger: GCCCTGAGCCGCCAGACTCAACTCCGTGAGCTCTAC...CTTCCTGGGGCTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CAA 90 bp CCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCTCAAGGCTATGCAGCTaGCTGAAGGTGGTGGCATCC +
Preference number: 5 (lower is better)
Translates to: PWRPRRARPRAPGGRCLLSRLCS*LKVVAS
Trigger: GGATGCCACCACCTTCAGCAAGCTGCATAGCCTTGA...GAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCCGACCCGGAGCCGGTaGTGCGCCAGGCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLPTRSR*CARLSS
Trigger: GGAGCTCAGCCTGGCGCACAACCGGCTCCGGGTCGG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp CCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCGATCACGGCTCATaGCAGCCTCAAACTTCTGGG +
Preference number: 5 (lower is better)
Translates to: PRRARPRAPGGRCLLSPRPDHGS*QPQTSG
Trigger: CCCAGAAGTTTGAGGCTGCAATGAGCCGTGATCGGG...CCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CAA 90 bp CAATCACACGTGGCTAGGTCGCACAGGGTGCTGTTTGGTGACCCCAGTGTGTGCGGCCCCTGGTGGGCGTaGTCTCCTCAGTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: QSHVARSHRVLFGDPSVCGPWWA*SPQSTA
Trigger: GGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCC...GCACACACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGCCACGTGTGATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CAA 90 bp CAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCTGCCTCCATCTGTGTaGGGAGTTTGGGGTAGGGTG +
Preference number: 5 (lower is better)
Translates to: QESQTKGPWWALSPQSTALPPSV*GVWGRV
Trigger: CACCCTACCCCAAACTCCCAACACAGATGGAGGCAG...GGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp CCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCTGCCTCCATCTGTGTaGGGAGTTTGGGGTAGGGTG +
Preference number: 5 (lower is better)
Translates to: PRRARPRAPGGRCLLSPRLPPSV*GVWGRV
Trigger: CACCCTACCCCAAACTCCCAACACAGATGGAGGCAG...CCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp TTGGGAGTTTGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGAGTTCCTGGAGCTGGTaGTTCTGCAGGGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: LGVWGRVCPARPAWSVSLSSWSW*FCRERC
Trigger: GCACCTCTCCCTGCAGAACAACCAGCTCCAGGAACT...CAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCAAACTCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp GCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGAGGAGATGAGGTTGTaGTGGAGGTTGAGGGTTCGC +
Preference number: 5 (lower is better)
Translates to: AQESQTKGPWWALSPQSTEEMRL*WRLRVR
Trigger: GCGAACCCTCAACCTCCACAACAACCTCATCTCCTC...CGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp CCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGGAGATGAGGTTGTaGTGGAGGTTGAGGGTTCGC +
Preference number: 5 (lower is better)
Translates to: PLVGVVSSVHGPAESQESEEMRL*WRLRVR
Trigger: GCGAACCCTCAACCTCCACAACAACCTCATCTCCTC...AGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp AGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGTCGGAGGAGATGAGGTaGTTGTGGAGGTTGAGGGTT +
Preference number: 5 (lower is better)
Translates to: SQTKGPWWALSPQSTAQRSEEMR*LWRLRV
Trigger: AACCCTCAACCTCCACAACAACCTCATCTCCTCCGA...CCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp GGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAACCTTGGAGATGAGATaGTTCTGCAGGTGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: GEPDQGPLVGVVSSVHGPTLEMR*FCRWSR
Trigger: GCGGCTCCACCTGCAGAACAATCTCATCTCCAAGGT...TGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672449.1
CDS-3UTR CAA 90 bp GCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGTCAAGGCTATGCAGCTaGCTGAAGGTGGTGGCATCC +
Preference number: 5 (lower is better)
Translates to: AQESQTKGPWWALSPQSTSRLCS*LKVVAS
Trigger: GGATGCCACCACCTTCAGCAAGCTGCATAGCCTTGA...CGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp TCTGAGCTGCTCTGCTGGGCCTCTCTAGGATCAGGGGCCCCCTGCCCGTGGCCCACTGTGGTCAGCTGGTaGTGGGAGAGATCCAGGTAT +
Preference number: 5 (lower is better)
Translates to: SELLCWASLGSGAPCPWPTVVSW*WERSRY
Trigger: ATACCTGGATCTCTCCCACAACCAGCTGACCACAGT...GGGCCACGGGCAGGGGGCCCCTGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CAA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTAGCGCGGCCACGTGGTaGTGGGGCAGCACCAGGGCA +
Preference number: 5 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLSAATW*WGSTRA
Trigger: TGCCCTGGTGCTGCCCCACAACCACGTGGCCGCGCT...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGCTGAGCTCCCGCAGTaGGTCCAGGCCGGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLAELPQ*VQAGQR
Trigger: CCTCTGGCCGGCCTGGACCAACTGCGGGAGCTCAGC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCCGACCCGGAGCCGGTaGTGCGCCAGGCTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSPTRSR*CARLSS
Trigger: GGAGCTCAGCCTGGCGCACAACCGGCTCCGGGTCGG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TCTGAGCTGCTCTGCTGGGCCTCTCTAGGATCAGGGGCCCCCTGCCCGTGGCCCACAAAGGACAGCTCATaGTGGCTGAGGTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: SELLCWASLGSGAPCPWPTKDSS*WLRSSI
Trigger: GATGCTGGACCTCAGCCACAATGAGCTGTCCTTTGT...GGGCCACGGGCAGGGGGCCCCTGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR CAA 90 bp GATGCTCGTCATGTGAAGCCTGTTGGCCCTGCACAGAGAGGCGGTCATGACCCTACGTGGCCGATGCGGTaGCCCTCGAGGTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: DARHVKPVGPAQRGGHDPTWPMR*PSRCSS
Trigger: GGAGCTGCACCTCGAGGGCAACCGCATCGGCCACGT...AGGGTCATGACCGCCTCTCTGTGCAGGGCCAACAGGCTTCACATGACGAGCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CAA 90 bp TCCCTGCAATCACACGTGGCTAGGTCGCACAGGGTGCTGTTTGGTGACCCCAGTACGTGGCCGATGCGGTaGCCCTCGAGGTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SLQSHVARSHRVLFGDPSTWPMR*PSRCSS
Trigger: GGAGCTGCACCTCGAGGGCAACCGCATCGGCCACGT...ACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGCCACGTGTGATTGCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CAA 90 bp GATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGCGCACAGGGTGCTGTTaGGTGACCCCAGTGTGTGCC +
Preference number: 5 (lower is better)
Translates to: DQDLLRIPCRVHHTQVWERTGCC*VTPVCA
Trigger: GGCACACACTGGGGTCACCAAACAGCACCCTGTGCG...CTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CAA 90 bp TGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTTTCAGTGGGTGGCCTaGGGCGTCCCTGCAATCACA +
Preference number: 5 (lower is better)
Translates to: WALSPQSTAQRSPRSLSCFQWVA*GVPAIT
Trigger: TGTGATTGCAGGGACGCCCAAGGCCACCCACTGAAA...GCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS TCA 90 bp TGGTTGGCAGCCAGATCCGCGACACGGAGGGACCGGGGCAGAAACTaGGGGGCCACTGAGAGCTTCGGAGGAGATGAGGTTGTTGTGGAG +
Preference number: 5 (lower is better)
Translates to: WLAARSATRRDRGRN*GATESFGGDEVVVE
Trigger: CTCCACAACAACCTCATCTCCTCCGAAGCTCTCAGTGGCCCCTCAGTTTCTGCCCCGGTCCCTCCGTGTCGCGGATCTGGCTGCCAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000587288.1
ENST00000671723.1
ENST00000673607.1
CDS TCA 90 bp TCGGCCACATGGCCAGCCCTGACTCTGCCATCTCGCCCAAGCTGCTaGCCAGGACTTCCTAATGGAAACCAGGCGGTCACCTCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: SATWPALTLPSRPSC*PGLPNGNQAVTSWS
Trigger: GCTCCAGGAGGTGACCGCCTGGTTTCCATTAGGAAGTCCTGGTCAGCAGCTTGGGCGAGATGGCAGAGTCAGGGCTGGCCATGTGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339560.10
ENST00000588872.3
ENST00000672449.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTCTGCTGCGGCTCTGGTGATGTaGTCCGGGAACACTCGAAGG +
Preference number: 5 (lower is better)
Translates to: LSPQSTAQRSPRSLSCSAAALVM*SGNTRR
Trigger: CCTTCGAGTGTTCCCGGACAACATCACCAGAGCCGC...AGCAGAGCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp GTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTCTGCAGGTTGTTGTGGAGGTaGAGGGTTCGCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: VVSSVHGPAESQESELLCRLLWR*RVRRPL
Trigger: CAGTGGCCTGCGAACCCTCAACCTCCACAACAACCT...GCAGAGCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp GTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCAGCTGTGTGGAGGAGATGAGGTTGTaGTGGAGGTTGAGGGTTCGC +
Preference number: 5 (lower is better)
Translates to: VCPARPAWSVSLEYASCVEEMRL*WRLRVR
Trigger: GCGAACCCTCAACCTCCACAACAACCTCATCTCCTC...CACACAGCTGGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp CCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCTCGGAGGAGATGAGGTaGTTGTGGAGGTTGAGGGTT +
Preference number: 5 (lower is better)
Translates to: PGEPDQGPLVGVVSSVHGSEEMR*LWRLRV
Trigger: AACCCTCAACCTCCACAACAACCTCATCTCCTCCGA...GCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp GTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGTCAAGGCTATGCAGCTaGCTGAAGGTGGTGGCATCC +
Preference number: 5 (lower is better)
Translates to: VGVVSSVHGPAESQESELSRLCS*LKVVAS
Trigger: GGATGCCACCACCTTCAGCAAGCTGCATAGCCTTGA...CAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp TGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCACTGTGGTCAGCTGGTaGTGGGAGAGATCCAGGTAT +
Preference number: 5 (lower is better)
Translates to: WGRVCPARPAWSVSLEYATVVSW*WERSRY
Trigger: ATACCTGGATCTCTCCCACAACCAGCTGACCACAGT...GGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp GGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCACTGTGGTCAGCTGGTaGTGGGAGAGATCCAGGTAT +
Preference number: 5 (lower is better)
Translates to: GGPGEPDQGPLVGVVSSVTVVSW*WERSRY
Trigger: ATACCTGGATCTCTCCCACAACCAGCTGACCACAGT...GACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCAGCGCGGCCACGTGGTaGTGGGGCAGCACCAGGGCA +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSSAATW*WGSTRA
Trigger: TGCCCTGGTGCTGCCCCACAACCACGTGGCCGCGCT...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGCTGAGCTCCCGCAGTaGGTCCAGGCCGGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSAELPQ*VQAGQR
Trigger: CCTCTGGCCGGCCTGGACCAACTGCGGGAGCTCAGC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCTGTTCTCCCGGGGCTTaGGGGGAGCTGGCCCACCCC +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSCSPGA*GELAHP
Trigger: GGGGTGGGCCAGCTCCCCCAAAGCCCCGGGAGAACA...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339560.10
ENST00000672524.1
CDS-3UTR CAA 90 bp TCACCCTCGGGGCACCTGAGGAAGAGGGCACGCAGGCGGGGTGTGCTGAGGAAGACAAAGGACAGCTCATaGTGGCTGAGGTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: SPSGHLRKRARRRGVLRKTKDSS*WLRSSI
Trigger: GATGCTGGACCTCAGCCACAATGAGCTGTCCTTTGT...CTTCCTCAGCACACCCCGCCTGCGTGCCCTCTTCCTCAGGTGCCCCGAGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CAA 90 bp AGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCACAAAGGACAGCTCATaGTGGCTGAGGTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: RRARPRAPGGRCLLSPRPTKDSS*WLRSSI
Trigger: GATGCTGGACCTCAGCCACAATGAGCTGTCCTTTGT...GGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp TGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCACAAAGGACAGCTCATaGTGGCTGAGGTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: WGRVCPARPAWSVSLEYATKDSS*WLRSSI
Trigger: GATGCTGGACCTCAGCCACAATGAGCTGTCCTTTGT...GGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp TCTGAGCTGCTCTGCTGGGCCTCTCTAGGATCAGGGGCCCCCTGCCCGTGGCCCGAGTGCTGGAAGGGTTaGGCTTTATTGTTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: SELLCWASLGSGAPCPWPECWKG*ALLLLP
Trigger: AGGCAGCAACAATAAAGCCAAACCCTTCCAGCACTC...GGGCCACGGGCAGGGGGCCCCTGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS CCA 90 bp TCGAAGGCCTCGTCAGGCAGGCCTTCGGAGGAGATGAGGTTGTTGTaGAGGTTGAGGGTTCGCAGGCCACTGAGGCGGGACAGCTCATTG +
Preference number: 5 (lower is better)
Translates to: SKASSGRPSEEMRLL*RLRVRRPLRRDSSL
Trigger: CAATGAGCTGTCCCGCCTCAGTGGCCTGCGAACCCTCAACCTCCACAACAACCTCATCTCCTCCGAAGGCCTGCCTGACGAGGCCTTCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS-3UTR CAA 90 bp GATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTTTGGGAGAGTTCCTGGAGCTGGTaGTTCTGCAGGGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: DQDLLRIPCRVHHTQVWESSWSW*FCRERC
Trigger: GCACCTCTCCCTGCAGAACAACCAGCTCCAGGAACT...CTCCCAAACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CAA 90 bp TGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTCGGAGGAGATGAGGTaGTTGTGGAGGTTGAGGGTT +
Preference number: 5 (lower is better)
Translates to: WALSPQSTAQRSPRSLSCSEEMR*LWRLRV
Trigger: AACCCTCAACCTCCACAACAACCTCATCTCCTCCGA...GCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538517.6
ENST00000672131.1
ENST00000672449.1
CDS-3UTR CAA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGGGGGCAGGCCAGCGTaGCTCAGCTGGTTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLGGRPA*LSWLLW
Trigger: CCACAACAACCAGCTGAGCAACGCTGGCCTGCCCCC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCCGCAGCTGGTTGCGTaGCAGCTGCAGGGTGCGCAG +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSPQLVA*QLQGAQ
Trigger: CTGCGCACCCTGCAGCTGCAACGCAACCAGCTGCGG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCCTGACCTGGAGGGCTaGGAGCTCATGCCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLPDLEG*ELMPGA
Trigger: GGCACCTGGCATGAGCTCCAAGCCCTCCAGGTCAGG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCACAAAGGACAGCTCATaGTGGCTGAGGTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: WWALSPQSTAQRSPRSLSTKDSS*WLRSSI
Trigger: GATGCTGGACCTCAGCCACAATGAGCTGTCCTTTGT...GCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp TTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTCTGCTCTGCCTCCATCTGTGTaGGGAGTTTGGGGTAGGGTG +
Preference number: 5 (lower is better)
Translates to: LSPQSTAQRSPRSLSCSALPPSV*GVWGRV
Trigger: CACCCTACCCCAAACTCCCAACACAGATGGAGGCAG...AGCAGAGCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp CAGCCCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCGGTTTGGCTTTATTGTaGCTGCCTCCATCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: QPWRPRRARPRAPGGRCLGLALL*LPPSVL
Trigger: CAACACAGATGGAGGCAGCAACAATAAAGCCAAACC...GAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp TCTGAGCTGCTCTGCTGGGCCTCTCTAGGATCAGGGGCCCCCTGCCCGTGGCCCAAGGGTTTGGCTTTATaGTTGCTGCCTCCATCTGTG +
Preference number: 5 (lower is better)
Translates to: SELLCWASLGSGAPCPWPKGLAL*LLPPSV
Trigger: CACAGATGGAGGCAGCAACAATAAAGCCAAACCCTT...GGGCCACGGGCAGGGGGCCCCTGATCCTAGAGAGGCCCAGCAGAGCAGCTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR CAA 90 bp AGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAAGGGTTTGGCTTTATaGTTGCTGCCTCCATCTGTG +
Preference number: 5 (lower is better)
Translates to: SQTKGPWWALSPQSTAQRKGLAL*LLPPSV
Trigger: CACAGATGGAGGCAGCAACAATAAAGCCAAACCCTT...CCGCTGGGCCGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp TGGGGTAGGGTGTGTCCCGCCAGGCCGGCGTGGTCTGTGAGCCTGGAGTATGCCGAGTGCTGGAAGGGTTaGGCTTTATTGTTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: WGRVCPARPAWSVSLEYAECWKG*ALLLLP
Trigger: AGGCAGCAACAATAAAGCCAAACCCTTCCAGCACTC...GGCATACTCCAGGCTCACAGACCACGCCGGCCTGGCGGGACACACCCTACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587954.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp CAATCACACGTGGCTAGGTCGCACAGGGTGCTGTTTGGTGACCCCAGTGTGTGCCGCACAGGGTGCTGTTaGGTGACCCCAGTGTGTGCC +
Preference number: 5 (lower is better)
Translates to: QSHVARSHRVLFGDPSVCRTGCC*VTPVCA
Trigger: GGCACACACTGGGGTCACCAAACAGCACCCTGTGCG...GCACACACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGCCACGTGTGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGGGGGCAGGCCAGCGTaGCTCAGCTGGTTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSGGRPA*LSWLLW
Trigger: CCACAACAACCAGCTGAGCAACGCTGGCCTGCCCCC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGTAGAGCTCACGGAGTaGAGTCTGGCGGCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLVELTE*SLAAQG
Trigger: GCCCTGAGCCGCCAGACTCAACTCCGTGAGCTCTAC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTAGCATCCGCAGCTGGTaGCGTTGCAGCTGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLSIRSW*RCSCRV
Trigger: CACCCTGCAGCTGCAACGCAACCAGCTGCGGATGCT...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCCTGACCTGGAGGGCTaGGAGCTCATGCCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSPDLEG*ELMPGA
Trigger: GGCACCTGGCATGAGCTCCAAGCCCTCCAGGTCAGG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp GAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCGGTTTGGCTTTATTGTaGCTGCCTCCATCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: EAQESQTKGPWWALSPQSGLALL*LPPSVL
Trigger: CAACACAGATGGAGGCAGCAACAATAAAGCCAAACC...GGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp CCTGGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGGTTTGGCTTTATTGTaGCTGCCTCCATCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: PGGPGEPDQGPLVGVVSSGLALL*LPPSVL
Trigger: CAACACAGATGGAGGCAGCAACAATAAAGCCAAACC...TGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp GCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCACGAAGGGTTTGGCTTTATaGTTGCTGCCTCCATCTGTG +
Preference number: 5 (lower is better)
Translates to: AQESQTKGPWWALSPQSTKGLAL*LLPPSV
Trigger: CACAGATGGAGGCAGCAACAATAAAGCCAAACCCTT...CGTGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp GGAGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCAAGGGTTTGGCTTTATaGTTGCTGCCTCCATCTGTG +
Preference number: 5 (lower is better)
Translates to: GGPGEPDQGPLVGVVSSVKGLAL*LLPPSV
Trigger: CACAGATGGAGGCAGCAACAATAAAGCCAAACCCTT...GACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS CCA 90 bp GAAACTGAGGGGCCACTGAGAGCTTCGGAGGAGATGAGGTTGTTGTaGAGGTTGAGGGTTCGCAGGCCACTGAGGCGGGACAGCTCATTG +
Preference number: 5 (lower is better)
Translates to: ETEGPLRASEEMRLL*RLRVRRPLRRDSSL
Trigger: CAATGAGCTGTCCCGCCTCAGTGGCCTGCGAACCCTCAACCTCCACAACAACCTCATCTCCTCCGAAGCTCTCAGTGGCCCCTCAGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000587288.1
ENST00000671723.1
ENST00000673607.1
CDS-3UTR CAA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGCGGCTCTGGTGATGTaGTCCGGGAACACTCGAAGG +
Preference number: 5 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLAALVM*SGNTRR
Trigger: CCTTCGAGTGTTCCCGGACAACATCACCAGAGCCGC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGTAGAGCTCACGGAGTaGAGTCTGGCGGCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSVELTE*SLAAQG
Trigger: GCCCTGAGCCGCCAGACTCAACTCCGTGAGCTCTAC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCAGCATCCGCAGCTGGTaGCGTTGCAGCTGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSSIRSW*RCSCRV
Trigger: CACCCTGCAGCTGCAACGCAACCAGCTGCGGATGCT...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp GATGCTCGTCATGTGAAGCCTGTTGGCCCTGCACAGAGAGGCGGTCATGACCCTCTGCCTCCATCTGTGTaGGGAGTTTGGGGTAGGGTG +
Preference number: 5 (lower is better)
Translates to: DARHVKPVGPAQRGGHDPLPPSV*GVWGRV
Trigger: CACCCTACCCCAAACTCCCAACACAGATGGAGGCAG...AGGGTCATGACCGCCTCTCTGTGCAGGGCCAACAGGCTTCACATGACGAGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538517.6
ENST00000672131.1
CDS-3UTR CAA 90 bp GCAGCCGGATCAGGACCTGCTCCGGATTCCCTGCCGTGTCCACCACACGCAGGTGGTTTGGCTTTATTGTaGCTGCCTCCATCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: AAGSGPAPDSLPCPPHAGGLALL*LPPSVL
Trigger: CAACACAGATGGAGGCAGCAACAATAAAGCCAAACC...ACCTGCGTGTGGTGGACACGGCAGGGAATCCGGAGCAGGTCCTGATCCGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
CDS-3UTR CAA 90 bp TGGGCGTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCGGTTTGGCTTTATTGTaGCTGCCTCCATCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: WALSPQSTAQRSPRSLSCGLALL*LPPSVL
Trigger: CAACACAGATGGAGGCAGCAACAATAAAGCCAAACC...GCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAACGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp AGGCCCAGGAGAGCCAGACCAAGGGCCCCTGGTGGGCGTTGTCTCCTCAGTCCAAAGGGTTTGGCTTTATaGTTGCTGCCTCCATCTGTG +
Preference number: 5 (lower is better)
Translates to: RPRRARPRAPGGRCLLSPKGLAL*LLPPSV
Trigger: CACAGATGGAGGCAGCAACAATAAAGCCAAACCCTT...TGGACTGAGGAGACAACGCCCACCAGGGGCCCTTGGTCTGGCTCTCCTGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538517.6
ENST00000587954.1
ENST00000672131.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp GTTGTCTCCTCAGTCCACGGCCCAGCGGAGTCCCAGGAGTCTGAGCTGCTCTGCGAGTGCTGGAAGGGTTaGGCTTTATTGTTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: VVSSVHGPAESQESELLCECWKG*ALLLLP
Trigger: AGGCAGCAACAATAAAGCCAAACCCTTCCAGCACTC...GCAGAGCAGCTCAGACTCCTGGGACTCCGCTGGGCCGTGGACTGAGGAGACAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587954.1
ENST00000672348.1
ENST00000672449.1
CDS-3UTR CAA 90 bp TCCCTGCAATCACACGTGGCTAGGTCGCACAGGGTGCTGTTTGGTGACCCCAGTTTTCAGTGGGTGGCCTaGGGCGTCCCTGCAATCACA +
Preference number: 5 (lower is better)
Translates to: SLQSHVARSHRVLFGDPSFQWVA*GVPAIT
Trigger: TGTGATTGCAGGGACGCCCAAGGCCACCCACTGAAA...ACTGGGGTCACCAAACAGCACCCTGTGCGACCTAGCCACGTGTGATTGCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587954.1
ENST00000672348.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGCGGCTCTGGTGATGTaGTCCGGGAACACTCGAAGG +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSAALVM*SGNTRR
Trigger: CCTTCGAGTGTTCCCGGACAACATCACCAGAGCCGC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTAGTTCCTGGAGCTGGTaGTTCTGCAGGGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLSSWSW*FCRERC
Trigger: GCACCTCTCCCTGCAGAACAACCAGCTCCAGGAACT...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTAGGTTGTTGTGGAGGTaGAGGGTTCGCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLRLLWR*RVRRPL
Trigger: CAGTGGCCTGCGAACCCTCAACCTCCACAACAACCT...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGCGTTGCTCAGCTGGTaGTTGTGGAGGTACACGGAC +
Preference number: 5 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLALLSW*LWRYTD
Trigger: GTCCGTGTACCTCCACAACAACCAGCTGAGCAACGC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTCCCGATCACGGCTCATaGCAGCCTCAAACTTCTGGG +
Preference number: 5 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLPDHGS*QPQTSG
Trigger: CCCAGAAGTTTGAGGCTGCAATGAGCCGTGATCGGG...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCAGTTCCTGGAGCTGGTaGTTCTGCAGGGAGAGGTGC +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSSSWSW*FCRERC
Trigger: GCACCTCTCCCTGCAGAACAACCAGCTCCAGGAACT...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCAGGTTGTTGTGGAGGTaGAGGGTTCGCAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSRLLWR*RVRRPL
Trigger: CAGTGGCCTGCGAACCCTCAACCTCCACAACAACCT...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGAGGAGATGAGGTTGTaGTGGAGGTTGAGGGTTCGC +
Preference number: 5 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLEEMRL*WRLRVR
Trigger: GCGAACCCTCAACCTCCACAACAACCTCATCTCCTC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTATCTCCATCACTTGGTaGGCAGCCAGATCCGCGACA +
Preference number: 5 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLISITW*AARSAT
Trigger: TGTCGCGGATCTGGCTGCCAACCAAGTGATGGAGAT...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTGAAGATCTCCATCACTaGGTTGGCAGCCAGATCCGC +
Preference number: 5 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLEDLHH*VGSQIR
Trigger: GCGGATCTGGCTGCCAACCAAGTGATGGAGATCTTC...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTTTGCTCAGCTGGTTGTaGTGGAGGTACACGGACCTG +
Preference number: 5 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLLLSWL*WRYTDL
Trigger: CAGGTCCGTGTACCTCCACAACAACCAGCTGAGCAA...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGCGTTGCTCAGCTGGTaGTTGTGGAGGTACACGGAC +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSALLSW*LWRYTD
Trigger: GTCCGTGTACCTCCACAACAACCAGCTGAGCAACGC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTACCTTGGAGATGAGATaGTTCTGCAGGTGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLTLEMR*FCRWSR
Trigger: GCGGCTCCACCTGCAGAACAATCTCATCTCCAAGGT...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTTCAAGGCTATGCAGCTaGCTGAAGGTGGTGGCATCC +
Preference number: 5 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLSRLCS*LKVVAS
Trigger: GGATGCCACCACCTTCAGCAAGCTGCATAGCCTTGA...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCCCCGATCACGGCTCATaGCAGCCTCAAACTTCTGGG +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSPDHGS*QPQTSG
Trigger: CCCAGAAGTTTGAGGCTGCAATGAGCCGTGATCGGG...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGAGGAGATGAGGTTGTaGTGGAGGTTGAGGGTTCGC +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSEEMRL*WRLRVR
Trigger: GCGAACCCTCAACCTCCACAACAACCTCATCTCCTC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTTCGGAGGAGATGAGGTaGTTGTGGAGGTTGAGGGTT +
Preference number: 5 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLSEEMR*LWRLRV
Trigger: AACCCTCAACCTCCACAACAACCTCATCTCCTCCGA...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCATCTCCATCACTTGGTaGGCAGCCAGATCCGCGACA +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSISITW*AARSAT
Trigger: TGTCGCGGATCTGGCTGCCAACCAAGTGATGGAGAT...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCGAAGATCTCCATCACTaGGTTGGCAGCCAGATCCGC +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSEDLHH*VGSQIR
Trigger: GCGGATCTGGCTGCCAACCAAGTGATGGAGATCTTC...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCTTGCTCAGCTGGTTGTaGTGGAGGTACACGGACCTG +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSLLSWL*WRYTDL
Trigger: CAGGTCCGTGTACCTCCACAACAACCAGCTGAGCAA...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCACCTTGGAGATGAGATaGTTCTGCAGGTGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSTLEMR*FCRWSR
Trigger: GCGGCTCCACCTGCAGAACAATCTCATCTCCAAGGT...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000671723.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCTCAAGGCTATGCAGCTaGCTGAAGGTGGTGGCATCC +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSSRLCS*LKVVAS
Trigger: GGATGCCACCACCTTCAGCAAGCTGCATAGCCTTGA...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCCAGTCTAGAGGGCAGTGGCCCGATCACGGCTCATTGCAGCCTCAAACTTACTGTGGTCAGCTGGTaGTGGGAGAGATCCAGGTAT +
Preference number: 5 (lower is better)
Translates to: LPSLEGSGPITAHCSLKLTVVSW*WERSRY
Trigger: ATACCTGGATCTCTCCCACAACCAGCTGACCACAGT...AAGTTTGAGGCTGCAATGAGCCGTGATCGGGCCACTGCCCTCTAGACTGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS-3UTR CAA 90 bp TTGCCAGGCTGGTCTCAAACCCATAGCCTAAAGCGATTCTCCTGCCTTGGCTCCTCGGAGGAGATGAGGTaGTTGTGGAGGTTGAGGGTT +
Preference number: 5 (lower is better)
Translates to: LPGWSQTHSLKRFSCLGSSEEMR*LWRLRV
Trigger: AACCCTCAACCTCCACAACAACCTCATCTCCTCCGA...GGAGCCAAGGCAGGAGAATCGCTTTAGGCTATGGGTTTGAGACCAGCCTGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672524.1
CDS CAA 72 bp GCGACCAGGTCACGGGCACCCAGCGCGGCCACGTGGTaGTGGGGCAGCACCAGGGCACGCAGGCGGCGGGGC +
Preference number: 6 (lower is better)
Translates to: ATRSRAPSAATW*WGSTRARRRRG
Trigger: GCCCCGCCGCCTGCGTGCCCTGGTGCTGCCCCACAACCACGTGGCCGCGCTGGGTGCCCGTGACCTGGTCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS CAA 90 bp CCCGGTGTGGCGACCAGGTCACGGGCACCCAGCGCGGCCACGTGGTaGTGGGGCAGCACCAGGGCACGCAGGCGGCGGGGCAGGGCTGGA +
Preference number: 6 (lower is better)
Translates to: PGVATRSRAPSAATW*WGSTRARRRRGRAG
Trigger: TCCAGCCCTGCCCCGCCGCCTGCGTGCCCTGGTGCTGCCCCACAACCACGTGGCCGCGCTGGGTGCCCGTGACCTGGTCGCCACACCGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS CCA 72 bp ACCAGGTCACGGGCACCCAGCGCGGCCACGTGGTTGTaGGGCAGCACCAGGGCACGCAGGCGGCGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: TRSRAPSAATWL*GSTRARRRRGR
Trigger: CCTGCCCCGCCGCCTGCGTGCCCTGGTGCTGCCCCACAACCACGTGGCCGCGCTGGGTGCCCGTGACCTGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS CCA 72 bp GTGGCGACCAGGTCACGGGCACCCAGCGCGGCCACGTaGTTGTGGGGCAGCACCAGGGCACGCAGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: VATRSRAPSAAT*LWGSTRARRRR
Trigger: CCGCCGCCTGCGTGCCCTGGTGCTGCCCCACAACCACGTGGCCGCGCTGGGTGCCCGTGACCTGGTCGCCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS CAA 90 bp GTCGCCGACCCGGAGCCGGTTGTGCGCCAGGCTGAGCTCCCGCAGTaGGTCCAGGCCGGCCAGAGGCTCGGGCTCGAGCATCCGCAGCTG +
Preference number: 6 (lower is better)
Translates to: VADPEPVVRQAELPQ*VQAGQRLGLEHPQL
Trigger: CAGCTGCGGATGCTCGAGCCCGAGCCTCTGGCCGGCCTGGACCAACTGCGGGAGCTCAGCCTGGCGCACAACCGGCTCCGGGTCGGCGAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000587954.1
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672348.1
ENST00000672449.1
ENST00000672524.1
CDS CCA 72 bp CGGAGCCGGTTGTGCGCCAGGCTGAGCTCCCGCAGTTaGTCCAGGCCGGCCAGAGGCTCGGGCTCGAGCATC +
Preference number: 6 (lower is better)
Translates to: RSRLCARLSSRS*SRPARGSGSSI
Trigger: GATGCTCGAGCCCGAGCCTCTGGCCGGCCTGGACCAACTGCGGGAGCTCAGCCTGGCGCACAACCGGCTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000587954.1
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672348.1
ENST00000672449.1
ENST00000672524.1
CDS CAA 72 bp CCGGCCAGAGGCTCGGGCTCGAGCATCCGCAGCTGGTaGCGTTGCAGCTGCAGGGTGCGCAGGCCAGTGGGC +
Preference number: 6 (lower is better)
Translates to: PARGSGSSIRSW*RCSCRVRRPVG
Trigger: GCCCACTGGCCTGCGCACCCTGCAGCTGCAACGCAACCAGCTGCGGATGCTCGAGCCCGAGCCTCTGGCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS CAA 72 bp CAGGTGCCTGGCCCGATGTCGCCGACCCGGAGCCGGTaGTGCGCCAGGCTGAGCTCCCGCAGTTGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: QVPGPMSPTRSR*CARLSSRSWSR
Trigger: CCTGGACCAACTGCGGGAGCTCAGCCTGGCGCACAACCGGCTCCGGGTCGGCGACATCGGGCCAGGCACCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000587954.1
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672348.1
ENST00000672449.1
ENST00000672524.1
CDS CAA 90 bp TGGTCCAGGCCGGCCAGAGGCTCGGGCTCGAGCATCCGCAGCTGGTaGCGTTGCAGCTGCAGGGTGCGCAGGCCAGTGGGCAGGCCCATG +
Preference number: 6 (lower is better)
Translates to: WSRPARGSGSSIRSW*RCSCRVRRPVGRPM
Trigger: CATGGGCCTGCCCACTGGCCTGCGCACCCTGCAGCTGCAACGCAACCAGCTGCGGATGCTCGAGCCCGAGCCTCTGGCCGGCCTGGACCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS CAA 90 bp AGCTCATGCCAGGTGCCTGGCCCGATGTCGCCGACCCGGAGCCGGTaGTGCGCCAGGCTGAGCTCCCGCAGTTGGTCCAGGCCGGCCAGA +
Preference number: 6 (lower is better)
Translates to: SSCQVPGPMSPTRSR*CARLSSRSWSRPAR
Trigger: TCTGGCCGGCCTGGACCAACTGCGGGAGCTCAGCCTGGCGCACAACCGGCTCCGGGTCGGCGACATCGGGCCAGGCACCTGGCATGAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000587954.1
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672348.1
ENST00000672449.1
ENST00000672524.1
CDS TCA 72 bp AGGCCAGTGGGCAGGCCCATGGGCAGCCGGGTTAGCTaGTTCCCTGCCAGGTCGAGGCTGCGCAGGGCACGC +
Preference number: 6 (lower is better)
Translates to: RPVGRPMGSRVS*FPARSRLRRAR
Trigger: GCGTGCCCTGCGCAGCCTCGACCTGGCAGGGAATCAGCTAACCCGGCTGCCCATGGGCCTGCCCACTGGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS GCA 72 bp GCAGCCGGGTTAGCTGATTCCCTGCCAGGTCGAGGCTaGGCAGGGCACGCAACCGGCGGAAGGCCCGGTGGT +
Preference number: 6 (lower is better)
Translates to: AAGLADSLPGRG*AGHATGGRPGG
Trigger: ACCACCGGGCCTTCCGCCGGTTGCGTGCCCTGCGCAGCCTCGACCTGGCAGGGAATCAGCTAACCCGGCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS GCA 72 bp TCGGGCTCGAGCATCCGCAGCTGGTTGCGTTGCAGCTaGAGGGTGCGCAGGCCAGTGGGCAGGCCCATGGGC +
Preference number: 6 (lower is better)
Translates to: SGSSIRSWLRCS*RVRRPVGRPMG
Trigger: GCCCATGGGCCTGCCCACTGGCCTGCGCACCCTGCAGCTGCAACGCAACCAGCTGCGGATGCTCGAGCCCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS GCA 72 bp CGGCCAGAGGCTCGGGCTCGAGCATCCGCAGCTGGTTaGGTTGCAGCTGCAGGGTGCGCAGGCCAGTGGGCA +
Preference number: 6 (lower is better)
Translates to: RPEARARASAAG*VAAAGCAGQWA
Trigger: TGCCCACTGGCCTGCGCACCCTGCAGCTGCAACGCAACCAGCTGCGGATGCTCGAGCCCGAGCCTCTGGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS CCA 72 bp CCTGACCTGGAGGGCTTGGAGCTCATGCCAGGTGCCTaGCCCGATGTCGCCGACCCGGAGCCGGTTGTGCGC +
Preference number: 6 (lower is better)
Translates to: PDLEGLELMPGA*PDVADPEPVVR
Trigger: GCGCACAACCGGCTCCGGGTCGGCGACATCGGGCCAGGCACCTGGCATGAGCTCCAAGCCCTCCAGGTCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672524.1
CDS GCA 72 bp ACCAGCCTGTGCCTGACCTGGAGGGCTTGGAGCTCATaGCAGGTGCCTGGCCCGATGTCGCCGACCCGGAGC +
Preference number: 6 (lower is better)
Translates to: TSLCLTWRAWSS*QVPGPMSPTRS
Trigger: GCTCCGGGTCGGCGACATCGGGCCAGGCACCTGGCATGAGCTCCAAGCCCTCCAGGTCAGGCACAGGCTGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672524.1
CDS CCA 72 bp GCAGCTGCAGGGTGCGCAGGCCAGTGGGCAGGCCCATaGGCAGCCGGGTTAGCTGATTCCCTGCCAGGTCGA +
Preference number: 6 (lower is better)
Translates to: AAAGCAGQWAGP*AAGLADSLPGR
Trigger: TCGACCTGGCAGGGAATCAGCTAACCCGGCTGCCCATGGGCCTGCCCACTGGCCTGCGCACCCTGCAGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS CCA 72 bp CAGCATCTGGAGGGCTTGGAGCTCATGCCAGGTGCCTaGCCCGATGTCGCCGACCCGGAGCCGGTTGTGCGC +
Preference number: 6 (lower is better)
Translates to: QHLEGLELMPGA*PDVADPEPVVR
Trigger: GCGCACAACCGGCTCCGGGTCGGCGACATCGGGCCAGGCACCTGGCATGAGCTCCAAGCCCTCCAGATGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000587954.1
ENST00000588872.3
ENST00000672348.1
ENST00000672449.1
CDS CAA 90 bp CCTGGGGACAGTGTGGCTAACCAGCCTGTGCCTGACCTGGAGGGCTaGGAGCTCATGCCAGGTGCCTGGCCCGATGTCGCCGACCCGGAG +
Preference number: 6 (lower is better)
Translates to: PGDSVANQPVPDLEG*ELMPGAWPDVADPE
Trigger: CTCCGGGTCGGCGACATCGGGCCAGGCACCTGGCATGAGCTCCAAGCCCTCCAGGTCAGGCACAGGCTGGTTAGCCACACTGTCCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000671723.1
ENST00000672131.1
ENST00000672142.1
ENST00000672524.1
CDS CCA 72 bp GCAACAGCAGGAGCAGCAGCAGGCTCGGCCACTGGGTaGGCCTCCCCATTGAAAGTGTGGGAGCTCCCTGGA +
Preference number: 6 (lower is better)
Translates to: ATAGAAAGSATG*ASPLKVWELPG
Trigger: TCCAGGGAGCTCCCACACTTTCAATGGGGAGGCCCACCCAGTGGCCGAGCCTGCTGCTGCTCCTGCTGTTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000538371.6
ENST00000538517.6
ENST00000585607.1
ENST00000671772.1
ENST00000672131.1
ENST00000672142.1
CDS CCA 72 bp CAGCAGGAGCAGCAGCAGGCTCGGCCACTGGTATGGTaGTGCACACCCACAGTCCCAGGTACTCAGGAGGCC +
Preference number: 6 (lower is better)
Translates to: QQEQQQARPLVW*CTPTVPGTQEA
Trigger: GGCCTCCTGAGTACCTGGGACTGTGGGTGTGCACCACCATACCAGTGGCCGAGCCTGCTGCTGCTCCTGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587458.1
ENST00000673052.1
CDS CCA 72 bp CCCGGCAACAGCAGGAGCAGCAGCAGGCTCGGCCACTaGTATGGTGGTGCACACCCACAGTCCCAGGTACTC +
Preference number: 6 (lower is better)
Translates to: PGNSRSSSRLGH*YGGAHPQSQVL
Trigger: GAGTACCTGGGACTGTGGGTGTGCACCACCATACCAGTGGCCGAGCCTGCTGCTGCTCCTGCTGTTGCCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587458.1
ENST00000673052.1
CDS TCA 72 bp GCCAGATCCGCGACACGGAGGGACCGGGGCAGAAACTaGGGGGCCACTGAGAGCTTCGGAGGAGATGAGGTT +
Preference number: 6 (lower is better)
Translates to: ARSATRRDRGRN*GATESFGGDEV
Trigger: AACCTCATCTCCTCCGAAGCTCTCAGTGGCCCCTCAGTTTCTGCCCCGGTCCCTCCGTGTCGCGGATCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000587288.1
ENST00000671723.1
ENST00000673607.1
CDS TCA 72 bp CAGCAGCAGGCTCGGCCACTGGGTGGGCCTCCCCATTaGAAGTGTGGGAGCTCCCTGGATAGGGCTGAGTCT +
Preference number: 6 (lower is better)
Translates to: QQQARPLGGPPH*KCGSSLDRAES
Trigger: AGACTCAGCCCTATCCAGGGAGCTCCCACACTTTCAATGGGGAGGCCCACCCAGTGGCCGAGCCTGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000538371.6
ENST00000538517.6
ENST00000585607.1
ENST00000671772.1
ENST00000672131.1
ENST00000672142.1
CDS GCA 72 bp CAGGAGCAGCAGCAGGCTCGGCCACTGGTATGGTGGTaGACACCCACAGTCCCAGGTACTCAGGAGGCCAAG +
Preference number: 6 (lower is better)
Translates to: QEQQQARPLVWW*TPTVPGTQEAK
Trigger: CTTGGCCTCCTGAGTACCTGGGACTGTGGGTGTGCACCACCATACCAGTGGCCGAGCCTGCTGCTGCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587458.1
ENST00000673052.1
CDS GCA 72 bp GGGCACCTTGGAGATGAGATTGTTAGCAGGGCTACCTaGAGGTGGAGCCGCTCGAGTGAGGGCGGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: GHLGDEIVSRAT*RWSRSSEGGRL
Trigger: CAGCCTGCCGCCCTCACTCGAGCGGCTCCACCTGCAGGTAGCCCTGCTAACAATCTCATCTCCAAGGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591353.5
ENST00000672070.1
CDS CAA 72 bp GTCCGGGGCAGGCCGGCGGGCACTGTGGTCAGCTGGTaGTGGGAGAGATCCAGGTATTCAAGGCTATGCAGC +
Preference number: 6 (lower is better)
Translates to: VRGRPAGTVVSW*WERSRYSRLCS
Trigger: GCTGCATAGCCTTGAATACCTGGATCTCTCCCACAACCAGCTGACCACAGTGCCCGCCGGCCTGCCCCGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000586075.1
ENST00000588764.5
ENST00000588872.3
ENST00000591353.5
ENST00000671723.1
ENST00000672070.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
ENST00000672870.1
ENST00000673043.1
CDS CAA 72 bp TGTCAGCTGGTTGTGCTGGAGGTAGAGCTCACGGAGTaGAGTCTGGCGGCTCAGGGCTCCTCGGGGCACCTT +
Preference number: 6 (lower is better)
Translates to: CQLVVLEVELTE*SLAAQGSSGHL
Trigger: AAGGTGCCCCGAGGAGCCCTGAGCCGCCAGACTCAACTCCGTGAGCTCTACCTCCAGCACAACCAGCTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000586075.1
ENST00000587288.1
ENST00000588764.5
ENST00000588872.3
ENST00000591353.5
ENST00000671723.1
ENST00000672070.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
ENST00000672870.1
ENST00000673043.1
ENST00000673607.1
CDS CAA 72 bp GGCAGGCCTTCGGAGGAGATGAGGTTGTTGTGGAGGTaGAGGGTTCGCAGGCCACTGAGGCGGGACAGCTCA +
Preference number: 6 (lower is better)
Translates to: GRPSEEMRLLWR*RVRRPLRRDSS
Trigger: TGAGCTGTCCCGCCTCAGTGGCCTGCGAACCCTCAACCTCCACAACAACCTCATCTCCTCCGAAGGCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS CAA 90 bp ATAGCCAGGGTCCGGGGCAGGCCGGCGGGCACTGTGGTCAGCTGGTaGTGGGAGAGATCCAGGTATTCAAGGCTATGCAGCTTGCTGAAG +
Preference number: 6 (lower is better)
Translates to: IARVRGRPAGTVVSW*WERSRYSRLCSLLK
Trigger: CTTCAGCAAGCTGCATAGCCTTGAATACCTGGATCTCTCCCACAACCAGCTGACCACAGTGCCCGCCGGCCTGCCCCGGACCCTGGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000586075.1
ENST00000588764.5
ENST00000588872.3
ENST00000591353.5
ENST00000671723.1
ENST00000672070.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
ENST00000672870.1
ENST00000673043.1
CDS TCA 72 bp TGGCCAGCCCTGACTCTGCCATCTCGCCCAAGCTGCTaGCCAGGACTTCCTAATGGAAACCAGGCGGTCACC +
Preference number: 6 (lower is better)
Translates to: WPALTLPSRPSC*PGLPNGNQAVT
Trigger: GGTGACCGCCTGGTTTCCATTAGGAAGTCCTGGTCAGCAGCTTGGGCGAGATGGCAGAGTCAGGGCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339560.10
ENST00000588872.3
ENST00000672449.1
ENST00000672524.1
CDS CCA 72 bp TTCTCCCCAAAGGTGAGGGGGAAGATCTCCATCACTTaGTTGGCAGCCAGATCCGCGACACGGAGGGACCGG +
Preference number: 6 (lower is better)
Translates to: FSPKVRGKISIT*LAARSATRRDR
Trigger: CCGGTCCCTCCGTGTCGCGGATCTGGCTGCCAACCAAGTGATGGAGATCTTCCCCCTCACCTTTGGGGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000587288.1
ENST00000588872.3
ENST00000671723.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
ENST00000673607.1
CDS CAA 72 bp CTTCTCCCCAAAGGTGAGGGGGAAGATCTCCATCACTaGGTTGGCAGCCAGATCCGCGACACGGAGGGACCG +
Preference number: 6 (lower is better)
Translates to: LLPKGEGEDLHH*VGSQIRDTEGP
Trigger: CGGTCCCTCCGTGTCGCGGATCTGGCTGCCAACCAAGTGATGGAGATCTTCCCCCTCACCTTTGGGGAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000587288.1
ENST00000588872.3
ENST00000671723.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
ENST00000673607.1
CDS CAA 72 bp AAGGCCTCGTCAGGCAGGCCTTCGGAGGAGATGAGGTaGTTGTGGAGGTTGAGGGTTCGCAGGCCACTGAGG +
Preference number: 6 (lower is better)
Translates to: KASSGRPSEEMR*LWRLRVRRPLR
Trigger: CCTCAGTGGCCTGCGAACCCTCAACCTCCACAACAACCTCATCTCCTCCGAAGGCCTGCCTGACGAGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000588872.3
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
CDS CAA 72 bp CTGAGAGCTTCGGAGGAGATGAGGTTGTTGTGGAGGTaGAGGGTTCGCAGGCCACTGAGGCGGGACAGCTCA +
Preference number: 6 (lower is better)
Translates to: LRASEEMRLLWR*RVRRPLRRDSS
Trigger: TGAGCTGTCCCGCCTCAGTGGCCTGCGAACCCTCAACCTCCACAACAACCTCATCTCCTCCGAAGCTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000587288.1
ENST00000671723.1
ENST00000673607.1
CDS CAA 72 bp ACTGAGGGGCCACTGAGAGCTTCGGAGGAGATGAGGTaGTTGTGGAGGTTGAGGGTTCGCAGGCCACTGAGG +
Preference number: 6 (lower is better)
Translates to: TEGPLRASEEMR*LWRLRVRRPLR
Trigger: CCTCAGTGGCCTGCGAACCCTCAACCTCCACAACAACCTCATCTCCTCCGAAGCTCTCAGTGGCCCCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254320.7
ENST00000587288.1
ENST00000671723.1
ENST00000673607.1
CDS TCA 72 bp GGTTGTTCTGCAGGGAGAGGTGCTGAGCGGCTCTGGTaGTGTTGTCCGGGAACACTCGAAGGTCCAAGCCAT +
Preference number: 6 (lower is better)
Translates to: GCSAGRGAERLW*CCPGTLEGPSH
Trigger: ATGGCTTGGACCTTCGAGTGTTCCCGGACAACATCACCAGAGCCGCTCAGCACCTCTCCCTGCAGAACAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000254320.7
ENST00000339560.10
ENST00000538371.6
ENST00000538517.6
ENST00000585607.1
ENST00000586075.1
ENST00000587288.1
ENST00000587458.1
ENST00000588872.3
ENST00000671723.1
ENST00000671772.1
ENST00000672131.1
ENST00000672142.1
ENST00000672449.1
ENST00000672524.1
ENST00000673043.1
ENST00000673052.1
ENST00000673607.1
CDS CAA 72 bp GATTGTTCTTCGGAGGAGATGAGGTTGTTGTGGAGGTaGAGGGTTCGCAGGCCACTGAGGCGGGACAGCTCA +
Preference number: 6 (lower is better)
Translates to: DCSSEEMRLLWR*RVRRPLRRDSS
Trigger: TGAGCTGTCCCGCCTCAGTGGCCTGCGAACCCTCAACCTCCACAACAACCTCATCTCCTCCGAAGAACAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000585607.1
ENST00000586075.1
ENST00000671772.1
ENST00000673043.1
CDS CAA 72 bp CAGAGCTGGGGGATGATGTCTCTCTCCCCCATCAGTTaGGGAGCTCTGGAGGGCAGAAATGTGGATCTCTTG +
Preference number: 6 (lower is better)
Translates to: QSWGMMSLSPIS*GALEGRNVDLL
Trigger: CAAGAGATCCACATTTCTGCCCTCCAGAGCTCCCAAACTGATGGGGGAGAGAGACATCATCCCCCAGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000538371.6
ENST00000538517.6
ENST00000587458.1
ENST00000672131.1
ENST00000672142.1
ENST00000673052.1
CDS TCA 72 bp AGGCAGGAGGAACACTTGAGCCTCTGGGCTCAAGTTTaGGGTTACAATGAGCTATGTGCCACTGCACGCCAC +
Preference number: 6 (lower is better)
Translates to: RQEEHLSLWAQV*GYNELCATARH
Trigger: GTGGCGTGCAGTGGCACATAGCTCATTGTAACCTCAAACTTGAGCCCAGAGGCTCAAGTGTTCCTCCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587458.1
ENST00000673052.1
CDS CCA 72 bp GTGCCCAGCCTGAAATTAGACATTTTCAGATCTGGGTaGGCCTCCCCATTGAAAGTGTGGGAGCTCCCTGGA +
Preference number: 6 (lower is better)
Translates to: VPSLKLDIFRSG*ASPLKVWELPG
Trigger: TCCAGGGAGCTCCCACACTTTCAATGGGGAGGCCCACCCAGATCTGAAAATGTCTAATTTCAGGCTGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588317.1
ENST00000673567.1