RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PODN (Homo sapiens)

Ensembl gene IDs: ENSG00000174348

Ensembl transcript IDs: ENST00000312553.10, ENST00000371500.8, ENST00000395871.7, ENST00000471210.1, ENST00000471285.1, ENST00000490650.1, ENST00000618387.1, ENST00000673702.1, ENST00000673956.1

Found 770 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCATGTGTCTGGCCGTGGGACACGCCGTGGGAAGGGGTGGGGATATaGGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCA +
Preference number: 1 (lower is better)
Translates to: ACVWPWDTPWEGVGI*DCVSPCHVGCLMCA
Trigger: TGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTCATATCCCCACCCCTTCCCACGGCGTGTCCCACGGCCAGACACATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
3UTR-3UTR GCA 90 bp CCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATGGGGGAGGGAATGGGTaGCTGTGTGTGCCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: PGNGRTDGQGRRRAAMADGGGNG*LCVPGQ
Trigger: CTGCCCTGGCACACACAGGCACCCATTCCCTCCCCC...ATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR TCA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGAAGGGGTGGGGATATaGGACTGTGTCAGCCCGTGT +
Preference number: 2 (lower is better)
Translates to: DGQMDRADGELLWLILAGEGVGI*DCVSPC
Trigger: ACACGGGCTGACACAGTCTCATATCCCCACCCCTTC...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR GCA 90 bp CCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATCACACAGGCGTGTGCTaGAGAAAAGAGTCCGGCGGT +
Preference number: 2 (lower is better)
Translates to: PGNGRTDGQGRRRAAMADHTGVC*RKESGG
Trigger: ACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTG...ATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR GCA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCACCTCTGCTTCACTCCTaGCCCAAGGCCCCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGAPLLHS*PKAPAA
Trigger: TGCTGCTGGGGCCTTGGGGCAGGAGTGAAGCAGAGG...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR CCA 90 bp CTGGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGAGCATGTGTCTGGCCGTaGGACACGCCGTGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: LATEHGYPCVFSRERTDRACVWP*DTPWEG
Trigger: CCCTTCCCACGGCGTGTCCCACGGCCAGACACATGC...TCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR CCA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGCATGTGTCTGGCCGTaGGACACGCCGTGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMACVWP*DTPWEG
Trigger: CCCTTCCCACGGCGTGTCCCACGGCCAGACACATGC...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR TCA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGAAGGGGTGGGGATATaGGACTGTGTCAGCCCGTGT +
Preference number: 2 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRREGVGI*DCVSPC
Trigger: ACACGGGCTGACACAGTCTCATATCCCCACCCCTTC...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR TCA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCGCTGAGCTGGGTGTTTaGGGGTGTGATGTGTGTGCA +
Preference number: 2 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSAELGV*GCDVCA
Trigger: TGCACACACATCACACCCTCAAACACCCAGCTCAGC...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR TCA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGTAGTTGTGTGTGGCTaGGCTGGGTGTTTGAGGGTG +
Preference number: 2 (lower is better)
Translates to: DGQMDRADGELLWLILAGVVVCG*AGCLRV
Trigger: CACCCTCAAACACCCAGCTCAGCCACACACAACTAC...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR GCA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGACAGCACACAGGCGTGTaGTGCAGAAAAGAGTCCGGC +
Preference number: 2 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRRQHTGV*CRKESG
Trigger: GCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTG...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR GCA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCGGGATGCCTCATGTGTaGAGCTGGGTGTGTCTGTGT +
Preference number: 2 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSGMPHV*SWVCLC
Trigger: ACACAGACACACCCAGCTGCACACATGAGGCATCCC...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR GCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCGGGATGCCTCATGTGTaGAGCTGGGTGTGTCTGTGT +
Preference number: 2 (lower is better)
Translates to: DRADGELLWLILAGARAVGMPHV*SWVCLC
Trigger: ACACAGACACACCCAGCTGCACACATGAGGCATCCC...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR GCA 90 bp CCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATGGGATGCCTCATGTGTaGAGCTGGGTGTGTCTGTGT +
Preference number: 2 (lower is better)
Translates to: PGNGRTDGQGRRRAAMADGMPHV*SWVCLC
Trigger: ACACAGACACACCCAGCTGCACACATGAGGCATCCC...ATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR TCA 90 bp CTGGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGAAGACCCTTCCCTGCATaGTTCAGAGGGCGTGGCAGC +
Preference number: 2 (lower is better)
Translates to: LATEHGYPCVFSRERTDRRPFPA*FRGRGS
Trigger: GCTGCCACGCCCTCTGAATCATGCAGGGAAGGGTCT...TCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR TCA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCAGGGCTGTTCGCACATaGCTTGTGCATGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSRAVRT*LVHVCV
Trigger: CACACACACATGCACAAGTCATGTGCGAACAGCCCT...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR TCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCAGGGCTGTTCGCACATaGCTTGTGCATGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: DRADGELLWLILAGARAVRAVRT*LVHVCV
Trigger: CACACACACATGCACAAGTCATGTGCGAACAGCCCT...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR GCA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCACAGCACACAGGCGTGTaGTGCAGAAAAGAGTCCGGC +
Preference number: 2 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGAQHTGV*CRKESG
Trigger: GCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTG...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR CCA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGGTGAGCACGGCAGAGTaGGGGGCTCACAGCACACAG +
Preference number: 2 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVVSTAE*GAHSTQ
Trigger: CTGTGTGCTGTGAGCCCCCCACTCTGCCGTGCTCAC...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
3UTR-3UTR CCA 90 bp TGGTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGGTGAGCACGGCAGAGTaGGGGGCTCACAGCACACAG +
Preference number: 2 (lower is better)
Translates to: WCVCIRIHMSAGGGNGCLVSTAE*GAHSTQ
Trigger: CTGTGTGCTGTGAGCCCCCCACTCTGCCGTGCTCAC...CAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR CCA 90 bp GCCAGGCCAGCAGTCCTGAAGGCTCCTGTCCCCATAGGATGGGAAAGGAATAAAGTGAGCACGGCAGAGTaGGGGGCTCACAGCACACAG +
Preference number: 2 (lower is better)
Translates to: ARPAVLKAPVPIGWERNKVSTAE*GAHSTQ
Trigger: CTGTGTGCTGTGAGCCCCCCACTCTGCCGTGCTCAC...TTTATTCCTTTCCCATCCTATGGGGACAGGAGCCTTCAGGACTGCTGGCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR CCA 90 bp GCCAGGCCAGCAGTCCTGAAGGCTCCTGTCCCCATAGGATGGGAAAGGAATAAAGTGTGTGCATGTGTCTaGCCGTGGGACACGCCGTGG +
Preference number: 2 (lower is better)
Translates to: ARPAVLKAPVPIGWERNKVCACV*PWDTPW
Trigger: CCACGGCGTGTCCCACGGCCAGACACATGCACACAC...TTTATTCCTTTCCCATCCTATGGGGACAGGAGCCTTCAGGACTGCTGGCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR CCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGTGTGCATGTGTCTaGCCGTGGGACACGCCGTGG +
Preference number: 2 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGVCACV*PWDTPW
Trigger: CCACGGCGTGTCCCACGGCCAGACACATGCACACAC...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
3UTR-3UTR CCA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGGTGTGTGCATGTGTCTaGCCGTGGGACACGCCGTGG +
Preference number: 2 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVVCACV*PWDTPW
Trigger: CCACGGCGTGTCCCACGGCCAGACACATGCACACAC...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
3UTR-3UTR CCA 90 bp TGGCAGGGAGGGACTCTTAGCAGAGTGACTGCCCAGCACCTGGAGGAGCAGGGTGAGACTGTGGTGGTTTaGAGGGTAGTTGTGTGTGGC +
Preference number: 2 (lower is better)
Translates to: WQGGTLSRVTAQHLEEQGETVVV*RVVVCG
Trigger: GCCACACACAACTACCCTCCAAACCACCACAGTCTC...ACCCTGCTCCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCCCTCCCTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR CCA 90 bp TGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTAGGCAAGAGCTGTCTGTaGCATAGGCTTTGGAGGGCT +
Preference number: 2 (lower is better)
Translates to: CLLQGTDGQMDRADGELLGKSCL*HRLWRA
Trigger: AGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCC...TAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR TCA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCAGTAGTTGTGTGTGGCTaGGCTGGGTGTTTGAGGGTG +
Preference number: 2 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGAVVVCG*AGCLRV
Trigger: CACCCTCAAACACCCAGCTCAGCCACACACAACTAC...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR TCA 90 bp TGGTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGAGACCCTTCCCTGCATaGTTCAGAGGGCGTGGCAGC +
Preference number: 2 (lower is better)
Translates to: WCVCIRIHMSAGGGNGCLRPFPA*FRGRGS
Trigger: GCTGCCACGCCCTCTGAATCATGCAGGGAAGGGTCT...CAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR GCA 90 bp GCCAGGCCAGCAGTCCTGAAGGCTCCTGTCCCCATAGGATGGGAAAGGAATAAAGGGCAGACCCTTCCCTaGATGATTCAGAGGGCGTGG +
Preference number: 2 (lower is better)
Translates to: ARPAVLKAPVPIGWERNKGQTLP*MIQRAW
Trigger: CCACGCCCTCTGAATCATGCAGGGAAGGGTCTGCCC...TTTATTCCTTTCCCATCCTATGGGGACAGGAGCCTTCAGGACTGCTGGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR CCA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATGCATGTGTCTGGCCGTaGGACACGCCGTGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHACVWP*DTPWEG
Trigger: CCCTTCCCACGGCGTGTCCCACGGCCAGACACATGC...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR TCA 90 bp GCCAGGCCAGCAGTCCTGAAGGCTCCTGTCCCCATAGGATGGGAAAGGAATAAAGAAGGGGTGGGGATATaGGACTGTGTCAGCCCGTGT +
Preference number: 2 (lower is better)
Translates to: ARPAVLKAPVPIGWERNKEGVGI*DCVSPC
Trigger: ACACGGGCTGACACAGTCTCATATCCCCACCCCTTC...TTTATTCCTTTCCCATCCTATGGGGACAGGAGCCTTCAGGACTGCTGGCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR TCA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGGCGGTAGTGGGGGTGTaGCAGAGACTGTGGTGGTTT +
Preference number: 2 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVAVVGV*QRLWWF
Trigger: AAACCACCACAGTCTCTGTCACACCCCCACTACCGC...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR TCA 90 bp ACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAAGACCCTTCCCTGCATaGTTCAGAGGGCGTGGCAGC +
Preference number: 2 (lower is better)
Translates to: TEHGYPCVFSRERTDRWTRPFPA*FRGRGS
Trigger: GCTGCCACGCCCTCTGAATCATGCAGGGAAGGGTCT...TGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR GCA 90 bp TGGTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGCACACAGGCGTGTGCTaGAGAAAAGAGTCCGGCGGT +
Preference number: 2 (lower is better)
Translates to: WCVCIRIHMSAGGGNGCLHTGVC*RKESGG
Trigger: ACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTG...CAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR GCA 90 bp TGGTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGCAGCACACAGGCGTGTaGTGCAGAAAAGAGTCCGGC +
Preference number: 2 (lower is better)
Translates to: WCVCIRIHMSAGGGNGCLQHTGV*CRKESG
Trigger: GCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTG...CAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR GCA 90 bp ACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACCCTTCCCTaGATGATTCAGAGGGCGTGG +
Preference number: 2 (lower is better)
Translates to: TEHGYPCVFSRERTDRWTGQTLP*MIQRAW
Trigger: CCACGCCCTCTGAATCATGCAGGGAAGGGTCTGCCC...TGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR CCA 90 bp CTGGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATCAGCCCGTGTCATGTaGGATGCCTCATGTGTGCAG +
Preference number: 2 (lower is better)
Translates to: LATEHGYPCVFSRERTDRSARVM*DASCVQ
Trigger: CTGCACACATGAGGCATCCCACATGACACGGGCTGA...TCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR CCA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCAGAGACTGTGGTGGTTTaGAGGGTAGTTGTGTGTGGC +
Preference number: 2 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGAETVVV*RVVVCG
Trigger: GCCACACACAACTACCCTCCAAACCACCACAGTCTC...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR CCA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCTGTGTGTGGCTGAGCTaGGTGTTTGAGGGTGTGATG +
Preference number: 2 (lower is better)
Translates to: LILAGARAVCGIGFGGLFCVWLS*VFEGVM
Trigger: CATCACACCCTCAAACACCCAGCTCAGCCACACACA...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR CCA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCGCATGTGTGTGTGTGTaGTGTGTATGCATACGCATA +
Preference number: 2 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSACVCV*CVCIRI
Trigger: TATGCGTATGCATACACACCACACACACACACATGC...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR TCA 90 bp ACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGCTGAGCTGGGTGTTTaGGGGTGTGATGTGTGTGCA +
Preference number: 2 (lower is better)
Translates to: TEHGYPCVFSRERTDRWTAELGV*GCDVCA
Trigger: TGCACACACATCACACCCTCAAACACCCAGCTCAGC...TGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR TCA 90 bp ACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGTAGTTGTGTGTGGCTaGGCTGGGTGTTTGAGGGTG +
Preference number: 2 (lower is better)
Translates to: TEHGYPCVFSRERTDRWTVVVCG*AGCLRV
Trigger: CACCCTCAAACACCCAGCTCAGCCACACACAACTAC...TGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR CCA 90 bp CACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCATACACATGGCATGTGTCTGGCCGTaGGACACGCCGTGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: HMTCACVCVWCVCIRIHMACVWP*DTPWEG
Trigger: CCCTTCCCACGGCGTGTCCCACGGCCAGACACATGC...CATGTGTATGCGTATGCATACACACCACACACACACACATGCACAAGTCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR CCA 90 bp GCCAGGCCAGCAGTCCTGAAGGCTCCTGTCCCCATAGGATGGGAAAGGAATAAATGTGTGTGGCTGAGCTaGGTGTTTGAGGGTGTGATG +
Preference number: 2 (lower is better)
Translates to: ARPAVLKAPVPIGWERNKCVWLS*VFEGVM
Trigger: CATCACACCCTCAAACACCCAGCTCAGCCACACACA...TTTATTCCTTTCCCATCCTATGGGGACAGGAGCCTTCAGGACTGCTGGCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR TCA 90 bp TTGGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCGTAGTTGTGTGTGGCTaGGCTGGGTGTTTGAGGGTG +
Preference number: 2 (lower is better)
Translates to: LEGCSHMTCACVCVWCVCVVVCG*AGCLRV
Trigger: CACCCTCAAACACCCAGCTCAGCCACACACAACTAC...GCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR CCA 90 bp CACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCATACACATGGTGAGCACGGCAGAGTaGGGGGCTCACAGCACACAG +
Preference number: 2 (lower is better)
Translates to: HMTCACVCVWCVCIRIHMVSTAE*GAHSTQ
Trigger: CTGTGTGCTGTGAGCCCCCCACTCTGCCGTGCTCAC...CATGTGTATGCGTATGCATACACACCACACACACACACATGCACAAGTCATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR CCA 90 bp ACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGAGACTGTGGTGGTTTaGAGGGTAGTTGTGTGTGGC +
Preference number: 2 (lower is better)
Translates to: TEHGYPCVFSRERTDRWTETVVV*RVVVCG
Trigger: GCCACACACAACTACCCTCCAAACCACCACAGTCTC...TGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR CCA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCGCATGTGTGTGTGTGTaGTGTGTATGCATACGCATA +
Preference number: 2 (lower is better)
Translates to: LILAGARAVCGIGFGGLFACVCV*CVCIRI
Trigger: TATGCGTATGCATACACACCACACACACACACATGC...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR GCA 90 bp CACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCATACACATGCCGTGTCATGTGGGATaGCTCATGTGTGCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: HMTCACVCVWCVCIRIHMPCHVG*LMCAAG
Trigger: CCCAGCTGCACACATGAGGCATCCCACATGACACGG...CATGTGTATGCGTATGCATACACACCACACACACACACATGCACAAGTCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR GCA 72 bp ACCCAGGGGGCTCTCCCATCCTGCCTCCACTGGGCTTaGCCATTGGAAAAGTGCCTGTGTCCTGCCAGGGCG +
Preference number: 3 (lower is better)
Translates to: TQGALPSCLHWA*PLEKCLCPARA
Trigger: CGCCCTGGCAGGACACAGGCACTTTTCCAATGGGCAAGCCCAGTGGAGGCAGGATGGGAGAGCCCCCTGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR TCA 72 bp TGGCCGTGGGACACGCCGTGGGAAGGGGTGGGGATATaGGACTGTGTCAGCCCGTGTCATGTGGGATGCCTC +
Preference number: 3 (lower is better)
Translates to: WPWDTPWEGVGI*DCVSPCHVGCL
Trigger: GAGGCATCCCACATGACACGGGCTGACACAGTCTCATATCCCCACCCCTTCCCACGGCGTGTCCCACGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
3UTR-3UTR CAA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAAGAGACTGTGGTGGTTaGGAGGGTAGTTGTGTGTGG +
Preference number: 3 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRRRDCGG*EGSCVW
Trigger: CCACACACAACTACCCTCCAAACCACCACAGTCTCT...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR CAA 90 bp TGGCAGGGAGGGACTCTTAGCAGAGTGACTGCCCAGCACCTGGAGGAGCAGGGTCTGTTCGCACATGACTaGTGCATGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: WQGGTLSRVTAQHLEEQGLFAHD*CMCVCV
Trigger: CACACACACACACATGCACAAGTCATGTGCGAACAG...ACCCTGCTCCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCCCTCCCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR CCA 72 bp GGGTGGGGATATGAGACTGTGTCAGCCCGTGTCATGTaGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTG +
Preference number: 3 (lower is better)
Translates to: GWGYETVSARVM*DASCVQLGVSV
Trigger: CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTCATATCCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
3UTR-3UTR CAA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCAAGAGACTGTGGTGGTTaGGAGGGTAGTTGTGTGTGG +
Preference number: 3 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGARDCGG*EGSCVW
Trigger: CCACACACAACTACCCTCCAAACCACCACAGTCTCT...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR-3UTR CAA 90 bp TGGTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGAGAGACTGTGGTGGTTaGGAGGGTAGTTGTGTGTGG +
Preference number: 3 (lower is better)
Translates to: WCVCIRIHMSAGGGNGCLRDCGG*EGSCVW
Trigger: CCACACACAACTACCCTCCAAACCACCACAGTCTCT...CAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR TCA 72 bp TGTCTGTGGCATAGGCTTTGGAGGGCTGTTCGCACATaGCTTGTGCATGTGTGTGTGTGTGGTGTGTATGCA +
Preference number: 3 (lower is better)
Translates to: CLWHRLWRAVRT*LVHVCVCGVYA
Trigger: TGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCCAAAGCCTATGCCACAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCGGCGAGGCAGGCCACTaGGCACGCGCTCCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVGEAGH*ARAPAR
Trigger: ACGCGCTGGAGCGCGTGCCCAGTGGCCTGCCTCGCC...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp TGGCAGGGAGGGACTCTTAGCAGAGTGACTGCCCAGCACCTGGAGGAGCAGGGTGGCGAGGCAGGCCACTaGGCACGCGCTCCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: WQGGTLSRVTAQHLEEQGGEAGH*ARAPAR
Trigger: ACGCGCTGGAGCGCGTGCCCAGTGGCCTGCCTCGCC...ACCCTGCTCCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCCCTCCCTGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGCCTGGGCGCCAGGGCTaGCGGAACCTGCTGCGCCCC +
Preference number: 4 (lower is better)
Translates to: ETVSARVMWDASCVQLGVPGRQG*RNLLRP
Trigger: GGGGCGCAGCAGGTTCCGTCAGCCCTGGCGCCCAGG...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312553.10
ENST00000395871.7
ENST00000673956.1
CDS-3UTR GCA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCGGGTGCCGAGTCAGATaGGCCTGGGCGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVGCRVR*AWAPGL
Trigger: CAGCCCTGGCGCCCAGGCGCATCTGACTCGGCACCC...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCGCAGCAGCACCAGGCTaGGCGGCAGCCCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: DRADGELLWLILAGARAVAAAPG*AAAQLG
Trigger: TCCCAGCTGGGCTGCCGCGCAGCCTGGTGCTGCTGC...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATGCAGCAGCACCAGGCTaGGCGGCAGCCCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PGNGRTDGQGRRRAAMADAAAPG*AAAQLG
Trigger: TCCCAGCTGGGCTGCCGCGCAGCCTGGTGCTGCTGC...ATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCCCGGCTCTGGGCCATaGTGCCTGCAGGGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: QGTDGQMDRADGELLWLIPGSGP*CLQGVP
Trigger: CGGCACCCCCTGCAGGCACCATGGCCCAGAGCCGGG...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTGGCGAGGCAGGCCACTaGGCACGCGCTCCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: QGTDGQMDRADGELLWLIGEAGH*ARAPAR
Trigger: ACGCGCTGGAGCGCGTGCCCAGTGGCCTGCCTCGCC...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGCCTGGGCGCCAGGGCTaGCGGAACCTGCTGCGCCCC +
Preference number: 4 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMPGRQG*RNLLRP
Trigger: GGGGCGCAGCAGGTTCCGTCAGCCCTGGCGCCCAGG...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312553.10
ENST00000395871.7
CDS-3UTR GCA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTTCCCCCAGTCTCAGCTaGGCTCCGCGGGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: QGTDGQMDRADGELLWLISPSLS*APRARA
Trigger: AGCCCGAGCCCGCGGAGCGCAGCTGAGACTGGGGGA...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTAGGGCTGACGGAACCTaGTGCGCCCCGGCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGRADGT*CAPAPS
Trigger: GCTCGGCGCCGGGGCGCAGCAGGTTCCGTCAGCCCT...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312553.10
ENST00000395871.7
ENST00000673956.1
CDS-3UTR GCA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGAGGGCTGACGGAACCTaGTGCGCCCCGGCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: ETVSARVMWDASCVQLGVRADGT*CAPAPS
Trigger: GCTCGGCGCCGGGGCGCAGCAGGTTCCGTCAGCCCT...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312553.10
ENST00000395871.7
ENST00000673956.1
CDS-3UTR GCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCGGCTCTGGGCCATGGTaGCTGCAGGGGGTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: DRADGELLWLILAGARAVGSGPW*LQGVPS
Trigger: ACTCGGCACCCCCTGCAGGCACCATGGCCCAGAGCC...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGGCAGGGAGGGACTCTTAGCAGAGTGACTGCCCAGCACCTGGAGGAGCAGGGTGGCTCTGGGCCATGGTaGCTGCAGGGGGTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: WQGGTLSRVTAQHLEEQGGSGPW*LQGVPS
Trigger: ACTCGGCACCCCCTGCAGGCACCATGGCCCAGAGCC...ACCCTGCTCCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCCCTCCCTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCGCGTCGCGGTGCACCTaGGGGCTGGTGATGCGGTTG +
Preference number: 4 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVASRCT*GLVMRL
Trigger: CAACCGCATCACCAGCCCGCAGGTGCACCGCGACGC...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCCGGAAGGCGTCGCGGTaGACCTGCGGGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: DRADGELLWLILAGARAVRKASR*TCGLVM
Trigger: CATCACCAGCCCGCAGGTGCACCGCGACGCCTTCCG...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCGTGTGCAGCCGGTTaGCCGACAGGTCCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: DGQMDRADGELLWLILAGACAAG*PTGPAS
Trigger: GCTCGCTGGACCTGTCGGGCAACCGGCTGCACACGC...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCCCAGGTGGCAGCGTGTaGAGCCGGTTGCCCGACAGG +
Preference number: 4 (lower is better)
Translates to: DRADGELLWLILAGARAVPGGSV*SRLPDR
Trigger: CCTGTCGGGCAACCGGCTGCACACGCTGCCACCTGG...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTGGCGAGGCAGGCCACTaGGCACGCGCTCCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGGEAGH*ARAPAR
Trigger: ACGCGCTGGAGCGCGTGCCCAGTGGCCTGCCTCGCC...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp TGGCAGGGAGGGACTCTTAGCAGAGTGACTGCCCAGCACCTGGAGGAGCAGGGTCCGTGTGCAACCGCTTaGGGCCCTGGAAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: WQGGTLSRVTAQHLEEQGPCATA*GPGRPV
Trigger: CACTGGCCTTCCAGGGCCTCAAGCGGTTGCACACGG...ACCCTGCTCCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCCCTCCCTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCCGTGTGCAACCGCTTaGGGCCCTGGAAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVPCATA*GPGRPV
Trigger: CACTGGCCTTCCAGGGCCTCAAGCGGTTGCACACGG...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGTCCCCCAGTCTCAGCTaGGCTCCGCGGGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLSPSLS*APRARA
Trigger: AGCCCGAGCCCGCGGAGCGCAGCTGAGACTGGGGGA...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTTCCCCCAGTCTCAGCTaGGCTCCGCGGGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGSPSLS*APRARA
Trigger: AGCCCGAGCCCGCGGAGCGCAGCTGAGACTGGGGGA...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCCCCCAGTCTCAGCTaGGCTCCGCGGGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: ETVSARVMWDASCVQLGVSPSLS*APRARA
Trigger: AGCCCGAGCCCGCGGAGCGCAGCTGAGACTGGGGGA...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTGGGTGCCGAGTCAGATaGGCCTGGGCGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGGCRVR*AWAPGL
Trigger: CAGCCCTGGCGCCCAGGCGCATCTGACTCGGCACCC...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGGGGTGCCGAGTCAGATaGGCCTGGGCGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: ETVSARVMWDASCVQLGVGCRVR*AWAPGL
Trigger: CAGCCCTGGCGCCCAGGCGCATCTGACTCGGCACCC...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCAGCAGCAGCACCAGGCTaGGCGGCAGCCCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGAAAAPG*AAAQLG
Trigger: TCCCAGCTGGGCTGCCGCGCAGCCTGGTGCTGCTGC...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGGCAGCAGCACCAGGCTaGGCGGCAGCCCAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLAAAPG*AAAQLG
Trigger: TCCCAGCTGGGCTGCCGCGCAGCCTGGTGCTGCTGC...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp TGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTAGCGTCGCGGTGCACCTaGGGGCTGGTGATGCGGTTG +
Preference number: 4 (lower is better)
Translates to: CLLQGTDGQMDRADGELLASRCT*GLVMRL
Trigger: CAACCGCATCACCAGCCCGCAGGTGCACCGCGACGC...TAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTAGCAGCAGGCGCAGCTTaGGGAAGGCGTCGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: CLLQGTDGQMDRADGELLAAGAA*GRRRGA
Trigger: TGCACCGCGACGCCTTCCGCAAGCTGCGCCTGCTGC...TAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCGTGTGCAGCCGGTTaGCCGACAGGTCCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRRACAAG*PTGPAS
Trigger: GCTCGCTGGACCTGTCGGGCAACCGGCTGCACACGC...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCGCCCCGGGAGCATCTaGTGGACGCCGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGRPGSI*WTPASF
Trigger: GAAGGAGGCCGGCGTCCAGCAGATGCTCCCGGGGCG...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395871.7
CDS-3UTR CCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCCCCTGCTCCCGCAGCTaGTTGCTGTGCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: DRADGELLWLILAGARAVPCSRS*LLCSSR
Trigger: CCTGCTGCTGCACAGCAACCAGCTGCGGGAGCAGGG...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TGGCAGGGAGGGACTCTTAGCAGAGTGACTGCCCAGCACCTGGAGGAGCAGGGTTCGAGGCAGCCCAGGTaGCAGCGTGTGCAGCCGGTT +
Preference number: 4 (lower is better)
Translates to: WQGGTLSRVTAQHLEEQGSRQPR*QRVQPV
Trigger: AACCGGCTGCACACGCTGCCACCTGGGCTGCCTCGA...ACCCTGCTCCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCCCTCCCTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCGTACAGGTACTCAAGTaGCTCGGGGAGCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: DRADGELLWLILAGARAVVQVLK*LGEPLG
Trigger: CCCGAGGGGCTCCCCGAGTCACTTGAGTACCTGTAC...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCGTACAGGTACTCAAGTaGCTCGGGGAGCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVVQVLK*LGEPLG
Trigger: CCCGAGGGGCTCCCCGAGTCACTTGAGTACCTGTAC...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCCCTGGGCGCCAGGGCTaGCGGAACCAGGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LILAGARAVCGIGFGGLFPGRQG*RNQAGC
Trigger: ACAGCCTGCCTGGTTCCGTCAGCCCTGGCGCCCAGG...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371500.8
ENST00000618387.1
CDS-3UTR GCA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTAGGGCTGACGGAACCTaGTGCGCCCCGGCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLRADGT*CAPAPS
Trigger: GCTCGGCGCCGGGGCGCAGCAGGTTCCGTCAGCCCT...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312553.10
ENST00000395871.7
ENST00000673956.1
CDS-3UTR GCA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTGGTGCCTGCAGGGGGTaGCGAGTCAGATGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGGACRG*RVRCAW
Trigger: CCAGGCGCATCTGACTCGGCACCCCCTGCAGGCACC...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAAGCACAGGTCCCAGGTaGAGCTGTGGCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRRSTGPR*SCGGSS
Trigger: GCTGCTGCCGCCACAGCTGCACCTGGGACCTGTGCT...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGAGTGGGTGGATGCCCTaGTCCCGCAGCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: DGQMDRADGELLWLILAGSGWMP*SRSWLL
Trigger: CAGCAACCAGCTGCGGGAGCAGGGCATCCACCCACT...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGGCAGGGAGGGACTCTTAGCAGAGTGACTGCCCAGCACCTGGAGGAGCAGGGTAGTGGGTGGATGCCCTaGTCCCGCAGCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: WQGGTLSRVTAQHLEEQGSGWMP*SRSWLL
Trigger: CAGCAACCAGCTGCGGGAGCAGGGCATCCACCCACT...ACCCTGCTCCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCCCTCCCTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCAGTGGGTGGATGCCCTaGTCCCGCAGCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: DRADGELLWLILAGARAVSGWMP*SRSWLL
Trigger: CAGCAACCAGCTGCGGGAGCAGGGCATCCACCCACT...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTAAGGCCAGTGGGTGGATaGCCTGCTCCCGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: CLLQGTDGQMDRADGELLRPVGG*PAPAAG
Trigger: ACCAGCTGCGGGAGCAGGGCATCCACCCACTGGCCT...TAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCAGCGTCGCGGTGCACCTaGGGGCTGGTGATGCGGTTG +
Preference number: 4 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGAASRCT*GLVMRL
Trigger: CAACCGCATCACCAGCCCGCAGGTGCACCGCGACGC...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGGCGTCGCGGTGCACCTaGGGGCTGGTGATGCGGTTG +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLASRCT*GLVMRL
Trigger: CAACCGCATCACCAGCCCGCAGGTGCACCGCGACGC...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCAGCAGCAGGCGCAGCTTaGGGAAGGCGTCGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGAAAGAA*GRRRGA
Trigger: TGCACCGCGACGCCTTCCGCAAGCTGCGCCTGCTGC...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTGCAGCAGGCGCAGCTTaGGGAAGGCGTCGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGAAGAA*GRRRGA
Trigger: TGCACCGCGACGCCTTCCGCAAGCTGCGCCTGCTGC...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGGCGTGTGCAGCCGGTTaGCCGACAGGTCCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVACAAG*PTGPAS
Trigger: GCTCGCTGGACCTGTCGGGCAACCGGCTGCACACGC...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCCAGGTGGCAGCGTGTaGAGCCGGTTGCCCGACAGG +
Preference number: 4 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGPGGSV*SRLPDR
Trigger: CCTGTCGGGCAACCGGCTGCACACGCTGCCACCTGG...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCGCGATGTCCAGCAGCTaGAGATGGGCGAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSAMSSS*RWARST
Trigger: GGTGGACCTCGCCCATCTGCAGCTGCTGGACATCGC...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCGCGATGTCCAGCAGCTaGAGATGGGCGAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: DRADGELLWLILAGARAVAMSSS*RWARST
Trigger: GGTGGACCTCGCCCATCTGCAGCTGCTGGACATCGC...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGGCAGGGAGGGACTCTTAGCAGAGTGACTGCCCAGCACCTGGAGGAGCAGGGTCCTCTGCTTCACTCCTaGCCCAAGGCCCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: WQGGTLSRVTAQHLEEQGPLLHS*PKAPAA
Trigger: TGCTGCTGGGGCCTTGGGGCAGGAGTGAAGCAGAGG...ACCCTGCTCCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCCCTCCCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCGAGTCAGATGCGCCTaGGCGCCAGGGCTGACGGAA +
Preference number: 4 (lower is better)
Translates to: QGTDGQMDRADGELLWLIRVRCA*APGLTE
Trigger: TTCCGTCAGCCCTGGCGCCCAGGCGCATCTGACTCG...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGAGCAGCACCCGGCTCTaGGCCATGGTGCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVSSTRL*AMVPAG
Trigger: CCCTGCAGGCACCATGGCCCAGAGCCGGGTGCTGCT...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGTCGGGGCTCAGGCTGTaGCCGCCACTTCGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: DGQMDRADGELLWLILAGSGLRL*PPLRPN
Trigger: ATTTGGCCGAAGTGGCGGCCACAGCCTGAGCCCCGA...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTGCCCTGGAAGGCCAGTaGGTGGATGCCCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGALEGQ*VDALLP
Trigger: CGGGAGCAGGGCATCCACCCACTGGCCTTCCAGGGC...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCGTGAGCACGGCAGAGTaGGGGGCTCACAGCACACAG +
Preference number: 4 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVVSTAE*GAHSTQ
Trigger: CTGTGTGCTGTGAGCCCCCCACTCTGCCGTGCTCAC...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp TGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTAGCATGTGTCTGGCCGTaGGACACGCCGTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: CLLQGTDGQMDRADGELLACVWP*DTPWEG
Trigger: CCCTTCCCACGGCGTGTCCCACGGCCAGACACATGC...TAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCGTGTGTGCATGTGTCTaGCCGTGGGACACGCCGTGG +
Preference number: 4 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVVCACV*PWDTPW
Trigger: CCACGGCGTGTCCCACGGCCAGACACATGCACACAC...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp CCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATGAACGGACGGACAGATaGACAGGGCAGACGGCGAGC +
Preference number: 4 (lower is better)
Translates to: PGNGRTDGQGRRRAAMADERTDR*TGQTAS
Trigger: GCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTC...ATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGCCCGGGAGCATCTGCTaGACGCCGGCCTCCTTCGGA +
Preference number: 4 (lower is better)
Translates to: ETVSARVMWDASCVQLGVPGSIC*TPASFG
Trigger: TCCGAAGGAGGCCGGCGTCCAGCAGATGCTCCCGGG...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395871.7
CDS-3UTR TCA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCGTTGCTGGAGCCGTTaGACATGTTGTCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVRCWSR*TCCPAA
Trigger: GGCTGCCGGACAACATGTTCAACGGCTCCAGCAACG...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCCGTTGCTGGAGCCGTTaGACATGTTGTCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: DRADGELLWLILAGARAVRCWSR*TCCPAA
Trigger: GGCTGCCGGACAACATGTTCAACGGCTCCAGCAACG...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGCCGTGTGCAACCGCTTaGGGCCCTGGAAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: ETVSARVMWDASCVQLGVPCATA*GPGRPV
Trigger: CACTGGCCTTCCAGGGCCTCAAGCGGTTGCACACGG...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCCGTGTGCAACCGCTTaGGGCCCTGGAAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLPCATA*GPGRPV
Trigger: CACTGGCCTTCCAGGGCCTCAAGCGGTTGCACACGG...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGGGTTGTGCAGGATCATaGGGGTGCGCACGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: ETVSARVMWDASCVQLGVGCAGS*GCARGE
Trigger: CTCGCCGCGTGCGCACCCTCATGATCCTGCACAACC...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAGTCGGTTGCTGGTaGGGTACAGCTCACGCAGCT +
Preference number: 4 (lower is better)
Translates to: DGQMDRADGELLWLILAGAVGCW*GTAHAA
Trigger: AGCTGCGTGAGCTGTACCTCACCAGCAACCGACTGC...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCGCAGTCGGTTGCTGGTaGGGTACAGCTCACGCAGCT +
Preference number: 4 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVAVGCW*GTAHAA
Trigger: AGCTGCGTGAGCTGTACCTCACCAGCAACCGACTGC...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp GCCAGGCCAGCAGTCCTGAAGGCTCCTGTCCCCATAGGATGGGAAAGGAATAAACCTGGGCGCCAGGGCTaGCGGAACCAGGCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: ARPAVLKAPVPIGWERNKPGRQG*RNQAGC
Trigger: ACAGCCTGCCTGGTTCCGTCAGCCCTGGCGCCCAGG...TTTATTCCTTTCCCATCCTATGGGGACAGGAGCCTTCAGGACTGCTGGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371500.8
ENST00000618387.1
CDS-3UTR GCA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGGGGTGCCGAGTCAGATaGGCCTGGGCGCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVGCRVR*AWAPGL
Trigger: CAGCCCTGGCGCCCAGGCGCATCTGACTCGGCACCC...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGGTGCCTGCAGGGGGTaGCGAGTCAGATGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCGACRG*RVRCAW
Trigger: CCAGGCGCATCTGACTCGGCACCCCCTGCAGGCACC...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp CTGGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGAGGCTCTGGGCCATGGTaGCTGCAGGGGGTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: LATEHGYPCVFSRERTDRGSGPW*LQGVPS
Trigger: ACTCGGCACCCCCTGCAGGCACCATGGCCCAGAGCC...TCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGAGCACAGGTCCCAGGTaGAGCTGTGGCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLSTGPR*SCGGSS
Trigger: GCTGCTGCCGCCACAGCTGCACCTGGGACCTGTGCT...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGAGCGTCTCCAGCCGGTaGAGCCGGGAGAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVSVSSR*SRESSS
Trigger: TGAGGAGCTCTCCCGGCTGCACCGGCTGGAGACGCT...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGACGGCAGCCCGGCGTCTaGCAGCTTGTTGTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRRRQPGV*QLVVVQ
Trigger: CTGCACAACAACAAGCTGGCAGACGCCGGGCTGCCG...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGAGGCCAGTGGGTGGATaGCCTGCTCCCGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLRPVGG*PAPAAG
Trigger: ACCAGCTGCGGGAGCAGGGCATCCACCCACTGGCCT...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp CCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTACAGGTGCACCGTGTaGAACCGCTTGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PGNGRTDGQGRRRAAMADYRCTV*NRLRPW
Trigger: CCAGGGCCTCAAGCGGTTGCACACGGTGCACCTGTA...ATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCTACAGGTGCACCGTGTaGAACCGCTTGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVYRCTV*NRLRPW
Trigger: CCAGGGCCTCAAGCGGTTGCACACGGTGCACCTGTA...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp ACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTCGGAAGGCGTCGCGGTaGACCTGCGGGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: TVSARVMWDASCVQLGVSRKASR*TCGLVM
Trigger: CATCACCAGCCCGCAGGTGCACCGCGACGCCTTCCG...AGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGCAGCAGGCGCAGCTTaGGGAAGGCGTCGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMAAGAA*GRRRGA
Trigger: TGCACCGCGACGCCTTCCGCAAGCTGCGCCTGCTGC...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGCCAGGTGGCAGCGTGTaGAGCCGGTTGCCCGACAGG +
Preference number: 4 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMPGGSV*SRLPDR
Trigger: CCTGTCGGGCAACCGGCTGCACACGCTGCCACCTGG...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCGGGCAGACCCTTCCCTaGATGATTCAGAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: DRADGELLWLILAGARAVGQTLP*MIQRAW
Trigger: CCACGCCCTCTGAATCATGCAGGGAAGGGTCTGCCC...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATGGGCAGACCCTTCCCTaGATGATTCAGAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: PGNGRTDGQGRRRAAMADGQTLP*MIQRAW
Trigger: CCACGCCCTCTGAATCATGCAGGGAAGGGTCTGCCC...ATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTGGGGGAGGGAATGGGTaGCTGTGTGTGCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGGGGNG*LCVPGQ
Trigger: CTGCCCTGGCACACACAGGCACCCATTCCCTCCCCC...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAAAAGTGCCTGTGTCCTaGCAGGGCGTGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRRKVPVS*QGVAGR
Trigger: CCTCCCTGCCACGCCCTGGCAGGACACAGGCACTTT...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTTCCACGACGCCCTCCTaGGAACAGGCACAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: QGTDGQMDRADGELLWLISTTPS*EQAQSR
Trigger: CCGAGACTGTGCCTGTTCCCAGGAGGGCGTCGTGGA...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGCAGGCGGCAGGTGCTTaGGCACGTGGCGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVQAAGA*ARGAGS
Trigger: ACTTCCTGCGCCACGTGCCCAAGCACCTGCCGCCTG...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCAGGCGGCAGGTGCTTaGGCACGTGGCGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGQAAGA*ARGAGS
Trigger: ACTTCCTGCGCCACGTGCCCAAGCACCTGCCGCCTG...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCACTCCAGGCTGCGGATaGGGGTCAGCACATTCGCGT +
Preference number: 4 (lower is better)
Translates to: DRADGELLWLILAGARAVTPGCG*GSAHSR
Trigger: ACGCGAATGTGCTGACCCCCATCCGCAGCCTGGAGT...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGACTCCAGGCTGCGGATaGGGGTCAGCACATTCGCGT +
Preference number: 4 (lower is better)
Translates to: DGQMDRADGELLWLILAGTPGCG*GSAHSR
Trigger: ACGCGAATGTGCTGACCCCCATCCGCAGCCTGGAGT...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGCCCTGCTCCCGCAGCTaGTTGCTGTGCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVPCSRS*LLCSSR
Trigger: CCTGCTGCTGCACAGCAACCAGCTGCGGGAGCAGGG...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCCCTGCTCCCGCAGCTaGTTGCTGTGCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGPCSRS*LLCSSR
Trigger: CCTGCTGCTGCACAGCAACCAGCTGCGGGAGCAGGG...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCCCTGCTCCCGCAGCTaGTTGCTGTGCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLPCSRS*LLCSSR
Trigger: CCTGCTGCTGCACAGCAACCAGCTGCGGGAGCAGGG...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCATGGAAGGCCAGTGGGTaGATGCCCTGCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGAWKASG*MPCSRS
Trigger: GCTGCGGGAGCAGGGCATCCACCCACTGGCCTTCCA...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTTGGAAGGCCAGTGGGTaGATGCCCTGCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGWKASG*MPCSRS
Trigger: GCTGCGGGAGCAGGGCATCCACCCACTGGCCTTCCA...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp CTGGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGAGCCCTGGAAGGCCAGTaGGTGGATGCCCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: LATEHGYPCVFSRERTDRALEGQ*VDALLP
Trigger: CGGGAGCAGGGCATCCACCCACTGGCCTTCCAGGGC...TCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGCCCTGGAAGGCCAGTaGGTGGATGCCCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCALEGQ*VDALLP
Trigger: CGGGAGCAGGGCATCCACCCACTGGCCTTCCAGGGC...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCGCCCTGGAAGGCCAGTaGGTGGATGCCCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: LILAGARAVCGIGFGGLFALEGQ*VDALLP
Trigger: CGGGAGCAGGGCATCCACCCACTGGCCTTCCAGGGC...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCATCGAGGCAGCCCAGGTaGCAGCGTGTGCAGCCGGTT +
Preference number: 4 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGASRQPR*QRVQPV
Trigger: AACCGGCTGCACACGCTGCCACCTGGGCTGCCTCGA...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGTCGAGGCAGCCCAGGTaGCAGCGTGTGCAGCCGGTT +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLSRQPR*QRVQPV
Trigger: AACCGGCTGCACACGCTGCCACCTGGGCTGCCTCGA...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGGCATGTGTCTGGCCGTaGGACACGCCGTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLACVWP*DTPWEG
Trigger: CCCTTCCCACGGCGTGTCCCACGGCCAGACACATGC...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCAGGGTGGCAGGCACCTaGCCACAGAGCATGGATACC +
Preference number: 4 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSRVAGT*PQSMDT
Trigger: GGTATCCATGCTCTGTGGCCAGGTGCCTGCCACCCT...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TGGCAGGGAGGGACTCTTAGCAGAGTGACTGCCCAGCACCTGGAGGAGCAGGGTTCTCCTAGGTGCAGCTaGGTCCTTCCTCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: WQGGTLSRVTAQHLEEQGSPRCS*VLPPWL
Trigger: GAGCCAGGGAGGAAGGACCCAGCTGCACCTAGGAGA...ACCCTGCTCCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCCCTCCCTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGTCTCCTAGGTGCAGCTaGGTCCTTCCTCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: DGQMDRADGELLWLILAGSPRCS*VLPPWL
Trigger: GAGCCAGGGAGGAAGGACCCAGCTGCACCTAGGAGA...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGGTTGTGCAGGATCATaGGGGTGCGCACGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMGCAGS*GCARGE
Trigger: CTCGCCGCGTGCGCACCCTCATGATCCTGCACAACC...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGGTTGTGCAGGATCATaGGGGTGCGCACGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCGCAGS*GCARGE
Trigger: CTCGCCGCGTGCGCACCCTCATGATCCTGCACAACC...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCGCGGCCAATGCCTGTaGTCTGGTTGTGCAGGATCA +
Preference number: 4 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVRGQCL*SGCAGS
Trigger: TGATCCTGCACAACCAGATCACAGGCATTGGCCGCG...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp CCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATGAAGGGGTGGGGATATaGGACTGTGTCAGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: PGNGRTDGQGRRRAAMADEGVGI*DCVSPC
Trigger: ACACGGGCTGACACAGTCTCATATCCCCACCCCTTC...ATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCGCGGTAGTGGGGGTGTaGCAGAGACTGTGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSAVVGV*QRLWWF
Trigger: AAACCACCACAGTCTCTGTCACACCCCCACTACCGC...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp TGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTAGCGAGCTGCTATGGCTaGTTCTGGCTGGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: CLLQGTDGQMDRADGELLASCYG*FWLGQE
Trigger: CTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGC...TAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCGAGCTGCTATGGCTaGTTCTGGCTGGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRRASCYG*FWLGQE
Trigger: CTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGC...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTGGACTCTTAGCAGAGTaGCTGCCCAGCACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QGTDGQMDRADGELLWLIGLLAE*LPSTWR
Trigger: CCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCC...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGGGTGCCTGCAGGGGGTaGCGAGTCAGATGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVGACRG*RVRCAW
Trigger: CCAGGCGCATCTGACTCGGCACCCCCTGCAGGCACC...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GCCAGGCCAGCAGTCCTGAAGGCTCCTGTCCCCATAGGATGGGAAAGGAATAAAGGCTCTGGGCCATGGTaGCTGCAGGGGGTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: ARPAVLKAPVPIGWERNKGSGPW*LQGVPS
Trigger: ACTCGGCACCCCCTGCAGGCACCATGGCCCAGAGCC...TTTATTCCTTTCCCATCCTATGGGGACAGGAGCCTTCAGGACTGCTGGCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGGCTCTGGGCCATGGTaGCTGCAGGGGGTGCCGAGT +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGGSGPW*LQGVPS
Trigger: ACTCGGCACCCCCTGCAGGCACCATGGCCCAGAGCC...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTAGCACAGGTCCCAGGTaGAGCTGTGGCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCSTGPR*SCGGSS
Trigger: GCTGCTGCCGCCACAGCTGCACCTGGGACCTGTGCT...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp CTGGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGAAGCGTCTCCAGCCGGTaGAGCCGGGAGAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LATEHGYPCVFSRERTDRSVSSR*SRESSS
Trigger: TGAGGAGCTCTCCCGGCTGCACCGGCTGGAGACGCT...TCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTAGCGTCTCCAGCCGGTaGAGCCGGGAGAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCSVSSR*SRESSS
Trigger: TGAGGAGCTCTCCCGGCTGCACCGGCTGGAGACGCT...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTAGTGGGTGGATGCCCTaGTCCCGCAGCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGSGWMP*SRSWLL
Trigger: CAGCAACCAGCTGCGGGAGCAGGGCATCCACCCACT...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGAGTGGGTGGATGCCCTaGTCCCGCAGCTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ETVSARVMWDASCVQLGVSGWMP*SRSWLL
Trigger: CAGCAACCAGCTGCGGGAGCAGGGCATCCACCCACT...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCAGGCCAGTGGGTGGATaGCCTGCTCCCGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LILAGARAVCGIGFGGLFRPVGG*PAPAAG
Trigger: ACCAGCTGCGGGAGCAGGGCATCCACCCACTGGCCT...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CTGGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGAAGGCCAGTGGGTGGATaGCCTGCTCCCGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LATEHGYPCVFSRERTDRRPVGG*PAPAAG
Trigger: ACCAGCTGCGGGAGCAGGGCATCCACCCACTGGCCT...TCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATACAGGTGCACCGTGTaGAACCGCTTGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CLLQGTDGQMDRADGELLYRCTV*NRLRPW
Trigger: CCAGGGCCTCAAGCGGTTGCACACGGTGCACCTGTA...TAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTCGGAAGGCGTCGCGGTaGACCTGCGGGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLRKASR*TCGLVM
Trigger: CATCACCAGCCCGCAGGTGCACCGCGACGCCTTCCG...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGGCAGCAGGCGCAGCTTaGGGAAGGCGTCGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVAAGAA*GRRRGA
Trigger: TGCACCGCGACGCCTTCCGCAAGCTGCGCCTGCTGC...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGGCGTGTGCAGCCGGTTaGCCGACAGGTCCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVACAAG*PTGPAS
Trigger: GCTCGCTGGACCTGTCGGGCAACCGGCTGCACACGC...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTCCAGGTGGCAGCGTGTaGAGCCGGTTGCCCGACAGG +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGPGGSV*SRLPDR
Trigger: CCTGTCGGGCAACCGGCTGCACACGCTGCCACCTGG...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGGCGATGTCCAGCAGCTaGAGATGGGCGAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVAMSSS*RWARST
Trigger: GGTGGACCTCGCCCATCTGCAGCTGCTGGACATCGC...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCACACAGGCGTGTGCTaGAGAAAAGAGTCCGGCGGT +
Preference number: 4 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVHTGVC*RKESGG
Trigger: ACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTG...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp TGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTAGGGCAGACCCTTCCCTaGATGATTCAGAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: CLLQGTDGQMDRADGELLGQTLP*MIQRAW
Trigger: CCACGCCCTCTGAATCATGCAGGGAAGGGTCTGCCC...TAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGGGGGAGGGAATGGGTaGCTGTGTGTGCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCGGGNG*LCVPGQ
Trigger: CTGCCCTGGCACACACAGGCACCCATTCCCTCCCCC...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGAAGGTGTCTCCTAGGTaGAGCTGGGTCCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: DGQMDRADGELLWLILAGKVSPR*SWVLPP
Trigger: GGGAGGAAGGACCCAGCTGCACCTAGGAGACACCTT...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATCCAGGCAGGCTGTTCTaGCTCCTCGCCTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: PGNGRTDGQGRRRAAMADPGRLF*LLAFHL
Trigger: CAAATGGAAGGCGAGGAGGCAGAACAGCCTGCCTGG...ATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371500.8
ENST00000618387.1
CDS-3UTR CCA 90 bp ACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTCGAGTCAGATGCGCCTaGGCGCCAGGGCTGACGGAA +
Preference number: 4 (lower is better)
Translates to: TVSARVMWDASCVQLGVSRVRCA*APGLTE
Trigger: TTCCGTCAGCCCTGGCGCCCAGGCGCATCTGACTCG...AGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATCCCGGCTCTGGGCCATaGTGCCTGCAGGGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHPGSGP*CLQGVP
Trigger: CGGCACCCCCTGCAGGCACCATGGCCCAGAGCCGGG...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TGGTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGAGCAGCACCCGGCTCTaGGCCATGGTGCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: WCVCIRIHMSAGGGNGCLSSTRL*AMVPAG
Trigger: CCCTGCAGGCACCATGGCCCAGAGCCGGGTGCTGCT...CAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGAGCAGCACCCGGCTCTaGGCCATGGTGCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVSSTRL*AMVPAG
Trigger: CCCTGCAGGCACCATGGCCCAGAGCCGGGTGCTGCT...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTAGCAGCACCCGGCTCTaGGCCATGGTGCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGSSTRL*AMVPAG
Trigger: CCCTGCAGGCACCATGGCCCAGAGCCGGGTGCTGCT...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGTCGGGGCTCAGGCTGTaGCCGCCACTTCGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLSGLRL*PPLRPN
Trigger: ATTTGGCCGAAGTGGCGGCCACAGCCTGAGCCCCGA...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGTCCACGACGCCCTCCTaGGAACAGGCACAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVSTTPS*EQAQSR
Trigger: CCGAGACTGTGCCTGTTCCCAGGAGGGCGTCGTGGA...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp CCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATACTGATCAGGGCGTTTaGCAGGAAGCGGGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: PGNGRTDGQGRRRAAMADTDQGV*QEAGCQ
Trigger: TTGGCACCCCGCTTCCTGCCAAACGCCCTGATCAGT...ATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAAGGTGCTTGGGCACGTaGCGCAGGAAGTTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRRRCLGT*RRKLLD
Trigger: GTCCAGCAACTTCCTGCGCCACGTGCCCAAGCACCT...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp CTGGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGACAGGCGGCAGGTGCTTaGGCACGTGGCGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LATEHGYPCVFSRERTDRQAAGA*ARGAGS
Trigger: ACTTCCTGCGCCACGTGCCCAAGCACCTGCCGCCTG...TCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TGGCAGGGAGGGACTCTTAGCAGAGTGACTGCCCAGCACCTGGAGGAGCAGGGTCGTCCACGCTCCGGATaGCGTTCTTCTCCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: WQGGTLSRVTAQHLEEQGRPRSG*RSSPSA
Trigger: TGCACTTGGAGAAGAACGCCATCCGGAGCGTGGACG...ACCCTGCTCCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCCCTCCCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATGGCGAGGCAGGCCACTaGGCACGCGCTCCAGCGCGT +
Preference number: 4 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHGEAGH*ARAPAR
Trigger: ACGCGCTGGAGCGCGTGCCCAGTGGCCTGCCTCGCC...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCCCTCCAGGAAGTAGGTaGTGGCAAAGTCTTCGCGGC +
Preference number: 4 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSPPGSR*WQSLRG
Trigger: GCCGCGAAGACTTTGCCACCACCTACTTCCTGGAGG...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGGTGAGCACGGCAGAGTaGGGGGCTCACAGCACACAG +
Preference number: 4 (lower is better)
Translates to: ETVSARVMWDASCVQLGVVSTAE*GAHSTQ
Trigger: CTGTGTGCTGTGAGCCCCCCACTCTGCCGTGCTCAC...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCGCATGTGTCTGGCCGTaGGACACGCCGTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LILAGARAVCGIGFGGLFACVWP*DTPWEG
Trigger: CCCTTCCCACGGCGTGTCCCACGGCCAGACACATGC...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGCATGTGTCTGGCCGTaGGACACGCCGTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCACVWP*DTPWEG
Trigger: CCCTTCCCACGGCGTGTCCCACGGCCAGACACATGC...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGGTGTGTGCATGTGTCTaGCCGTGGGACACGCCGTGG +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLVCACV*PWDTPW
Trigger: CCACGGCGTGTCCCACGGCCAGACACATGCACACAC...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGGTGTGTGCATGTGTCTaGCCGTGGGACACGCCGTGG +
Preference number: 4 (lower is better)
Translates to: ETVSARVMWDASCVQLGVVCACV*PWDTPW
Trigger: CCACGGCGTGTCCCACGGCCAGACACATGCACACAC...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAAGGGTGGCAGGCACCTaGCCACAGAGCATGGATACC +
Preference number: 4 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRRRVAGT*PQSMDT
Trigger: GGTATCCATGCTCTGTGGCCAGGTGCCTGCCACCCT...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATCTCCTAGGTGCAGCTaGGTCCTTCCTCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CLLQGTDGQMDRADGELLSPRCS*VLPPWL
Trigger: GAGCCAGGGAGGAAGGACCCAGCTGCACCTAGGAGA...TAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
3UTR CAA 72 bp GGGTGGCAGGCACCTGGCCACAGAGCATGGATACCCTaGTGTCTTCTCCAGGGAACGGACGGACAGATGGAC +
Preference number: 4 (lower is better)
Translates to: GWQAPGHRAWIP*CLLQGTDGQMD
Trigger: GTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCCAGGTGCCTGCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCCAGCAAAGTCCACACTaGTCAGGGCGTTTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSQQSPH*SGRLAG
Trigger: TCCTGCCAAACGCCCTGATCAGTGTGGACTTTGCTG...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGCAGCAAAGTCCACACTaGTCAGGGCGTTTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: DGQMDRADGELLWLILAGQQSPH*SGRLAG
Trigger: TCCTGCCAAACGCCCTGATCAGTGTGGACTTTGCTG...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTAGTTGCTGGACAGGATaGGGACCTCGACGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: QGTDGQMDRADGELLWLISCWTG*GPRRCW
Trigger: CCAGCAACGTCGAGGTCCTCATCCTGTCCAGCAACT...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GCCAGGCCAGCAGTCCTGAAGGCTCCTGTCCCCATAGGATGGGAAAGGAATAAAGGTTGTGCAGGATCATaGGGGTGCGCACGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: ARPAVLKAPVPIGWERNKGCAGS*GCARGE
Trigger: CTCGCCGCGTGCGCACCCTCATGATCCTGCACAACC...TTTATTCCTTTCCCATCCTATGGGGACAGGAGCCTTCAGGACTGCTGGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCGCGGCCAATGCCTGTaGTCTGGTTGTGCAGGATCA +
Preference number: 4 (lower is better)
Translates to: QGTDGQMDRADGELLWLIRGQCL*SGCAGS
Trigger: TGATCCTGCACAACCAGATCACAGGCATTGGCCGCG...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGACGCGGCCAATGCCTGTaGTCTGGTTGTGCAGGATCA +
Preference number: 4 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRRRGQCL*SGCAGS
Trigger: TGATCCTGCACAACCAGATCACAGGCATTGGCCGCG...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGCCTCGGGGATCTCTGTaGGCTGATTCCCGGCGATGT +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVPRGSL*ADSRRC
Trigger: ACATCGCCGGGAATCAGCTCACAGAGATCCCCGAGG...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCGTACAGGTACTCAAGTaGCTCGGGGAGCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: LILAGARAVCGIGFGGLFVQVLK*LGEPLG
Trigger: CCCGAGGGGCTCCCCGAGTCACTTGAGTACCTGTAC...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCGCTGAGCTGGGTGTTTaGGGGTGTGATGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: DRADGELLWLILAGARAVAELGV*GCDVCA
Trigger: TGCACACACATCACACCCTCAAACACCCAGCTCAGC...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTAGACCCTTCCCTGCATaGTTCAGAGGGCGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGRPFPA*FRGRGS
Trigger: GCTGCCACGCCCTCTGAATCATGCAGGGAAGGGTCT...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCCTTCCCCCACAGGCCTaGAGAACAAAGGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: DRADGELLWLILAGARAVLPPQA*RTKVSP
Trigger: AGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAG...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTAGCACAGGTCCCAGGTaGAGCTGTGGCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLSTGPR*SCGGSS
Trigger: GCTGCTGCCGCCACAGCTGCACCTGGGACCTGTGCT...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGAGCACAGGTCCCAGGTaGAGCTGTGGCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VCMHTHTHVSRGREWVPVSTGPR*SCGGSS
Trigger: GCTGCTGCCGCCACAGCTGCACCTGGGACCTGTGCT...CACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTAGCGTCTCCAGCCGGTaGAGCCGGGAGAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGSVSSR*SRESSS
Trigger: TGAGGAGCTCTCCCGGCTGCACCGGCTGGAGACGCT...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCCGGCAGCCCGGCGTCTaGCAGCTTGTTGTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LILAGARAVCGIGFGGLFRQPGV*QLVVVQ
Trigger: CTGCACAACAACAAGCTGGCAGACGCCGGGCTGCCG...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGAGGCCAGTGGGTGGATaGCCTGCTCCCGCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVRPVGG*PAPAAG
Trigger: ACCAGCTGCGGGAGCAGGGCATCCACCCACTGGCCT...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCGCGTTGTTGTACAGGTaGACCGTGTGCAACCGCTTG +
Preference number: 4 (lower is better)
Translates to: DRADGELLWLILAGARAVALLYR*TVCNRL
Trigger: CAAGCGGTTGCACACGGTGCACCTGTACAACAACGC...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCGCGTTGTTGTACAGGTaGACCGTGTGCAACCGCTTG +
Preference number: 4 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVALLYR*TVCNRL
Trigger: CAAGCGGTTGCACACGGTGCACCTGTACAACAACGC...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGCCTGTGATCTGGTTGTaGAGGATCATGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: DGQMDRADGELLWLILAGPVIWL*RIMRVR
Trigger: GCGCACCCTCATGATCCTGCACAACCAGATCACAGG...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCCACCAGCGCCCCTCGTaGCAAGGCAGCCAGCTCATT +
Preference number: 4 (lower is better)
Translates to: LILAGARAVCGIGFGGLFHQRPS*QGSQLI
Trigger: AATGAGCTGGCTGCCTTGGCACGAGGGGCGCTGGTG...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCTCAATGTCCAAGACCTaGAGGTGCTTCAGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVSMSKT*RCFSLR
Trigger: CCGGAGGCTGAAGCACCTGCAGGTCTTGGACATTGA...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp CCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCAATGTCCAAGACCTaGAGGTGCTTCAGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: PGNGRTDGQGRRRAAMADSMSKT*RCFSLR
Trigger: CCGGAGGCTGAAGCACCTGCAGGTCTTGGACATTGA...ATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTACAGCACACAGGCGTGTaGTGCAGAAAAGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: CLLQGTDGQMDRADGELLQHTGV*CRKESG
Trigger: GCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTG...TAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTACCGTGTCATGTGGGATaGCTCATGTGTGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: CLLQGTDGQMDRADGELLPCHVG*LMCAAG
Trigger: CCCAGCTGCACACATGAGGCATCCCACATGACACGG...TAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGAAAGTGCCTGTGTCCTaGCAGGGCGTGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMKVPVS*QGVAGR
Trigger: CCTCCCTGCCACGCCCTGGCAGGACACAGGCACTTT...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCAAAGTGCCTGTGTCCTaGCAGGGCGTGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LILAGARAVCGIGFGGLFKVPVS*QGVAGR
Trigger: CCTCCCTGCCACGCCCTGGCAGGACACAGGCACTTT...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCTGCCTCCACTGGGCTTaGCCATTGGAAAAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: DRADGELLWLILAGARAVCLHWA*PLEKCL
Trigger: CAGGCACTTTTCCAATGGGCAAGCCCAGTGGAGGCA...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAAAGGTGTCTCCTAGGTaGAGCTGGGTCCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRRKVSPR*SWVLPP
Trigger: GGGAGGAAGGACCCAGCTGCACCTAGGAGACACCTT...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGGGAATGCTGTGCGCCTaGAGATCAGCCGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVGMLCA*RSAGLL
Trigger: AAGGAGGCCGGCTGATCTGCAGGCGCACAGCATTCC...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371500.8
CDS-3UTR CCA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTACTTCGGCCAAATCCTaGGGCCCTCACGGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGTSAKS*GPHGKH
Trigger: GTGCTTGCCGTGAGGGCCCCAGGATTTGGCCGAAGT...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp CTGGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATCGGGGCTCAGGCTGTaGCCGCCACTTCGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: LATEHGYPCVFSRERTDRSGLRL*PPLRPN
Trigger: ATTTGGCCGAAGTGGCGGCCACAGCCTGAGCCCCGA...TCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp ACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTTCGGGGCTCAGGCTGTaGCCGCCACTTCGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: TVSARVMWDASCVQLGVSSGLRL*PPLRPN
Trigger: ATTTGGCCGAAGTGGCGGCCACAGCCTGAGCCCCGA...AGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTCAAACGCCTTCTCTaGGAGCCCTCGGGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: QGTDGQMDRADGELLWLILKRLL*EPSGSQ
Trigger: CTGACTTCCCGAGGGCTCCCAGAGAAGGCGTTTGAG...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGAGGTGCTTGGGCACGTaGCGCAGGAAGTTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVRCLGT*RRKLLD
Trigger: GTCCAGCAACTTCCTGCGCCACGTGCCCAAGCACCT...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp CCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATCCAGGTACTCCAGGCTaGAGAGCTTCCAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: PGNGRTDGQGRRRAAMADPGTPG*RASRRS
Trigger: AGACCTTCTGGAAGCTCTCCAGCCTGGAGTACCTGG...ATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCCAGGTACTCCAGGCTaGAGAGCTTCCAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVPGTPG*RASRRS
Trigger: AGACCTTCTGGAAGCTCTCCAGCCTGGAGTACCTGG...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGACTCCAGGCTGCGGATaGGGGTCAGCACATTCGCGT +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLTPGCG*GSAHSR
Trigger: ACGCGAATGTGCTGACCCCCATCCGCAGCCTGGAGT...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGACTCCAGGCTGCGGATaGGGGTCAGCACATTCGCGT +
Preference number: 4 (lower is better)
Translates to: ETVSARVMWDASCVQLGVTPGCG*GSAHSR
Trigger: ACGCGAATGTGCTGACCCCCATCCGCAGCCTGGAGT...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTCCCTGCTCCCGCAGCTaGTTGCTGTGCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGPCSRS*LLCSSR
Trigger: CCTGCTGCTGCACAGCAACCAGCTGCGGGAGCAGGG...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTTGGAAGGCCAGTGGGTaGATGCCCTGCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLWKASG*MPCSRS
Trigger: GCTGCGGGAGCAGGGCATCCACCCACTGGCCTTCCA...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGTGGAAGGCCAGTGGGTaGATGCCCTGCTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVWKASG*MPCSRS
Trigger: GCTGCGGGAGCAGGGCATCCACCCACTGGCCTTCCA...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCCAGGAAGTAGGTGGTaGCAAAGTCTTCGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVPGSRW*QSLRGQ
Trigger: TTGGCCGCGAAGACTTTGCCACCACCTACTTCCTGG...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGTCGAGGCAGCCCAGGTaGCAGCGTGTGCAGCCGGTT +
Preference number: 4 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVSRQPR*QRVQPV
Trigger: AACCGGCTGCACACGCTGCCACCTGGGCTGCCTCGA...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTTCGAGGCAGCCCAGGTaGCAGCGTGTGCAGCCGGTT +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGSRQPR*QRVQPV
Trigger: AACCGGCTGCACACGCTGCCACCTGGGCTGCCTCGA...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCTCAGCCCGTGTCATGTaGGATGCCTCATGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVSARVM*DASCVQ
Trigger: CTGCACACATGAGGCATCCCACATGACACGGGCTGA...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GCCAGGCCAGCAGTCCTGAAGGCTCCTGTCCCCATAGGATGGGAAAGGAATAAAGCATGTGTCTGGCCGTaGGACACGCCGTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: ARPAVLKAPVPIGWERNKACVWP*DTPWEG
Trigger: CCCTTCCCACGGCGTGTCCCACGGCCAGACACATGC...TTTATTCCTTTCCCATCCTATGGGGACAGGAGCCTTCAGGACTGCTGGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGGACGGCGAGCTGCTATaGCTGATTCTGGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLDGELL*LILAGA
Trigger: TGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTC...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp CTGGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGAGAACGGACGGACAGATaGACAGGGCAGACGGCGAGC +
Preference number: 4 (lower is better)
Translates to: LATEHGYPCVFSRERTDRERTDR*TGQTAS
Trigger: GCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTC...TCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTAGGGTGGCAGGCACCTaGCCACAGAGCATGGATACC +
Preference number: 4 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGRVAGT*PQSMDT
Trigger: GGTATCCATGCTCTGTGGCCAGGTGCCTGCCACCCT...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TGGTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGACCAGTGGCGCCTCGTaGAGCAGGGCAGACCACAGC +
Preference number: 4 (lower is better)
Translates to: WCVCIRIHMSAGGGNGCLTSGAS*SRADHS
Trigger: GCTGTGGTCTGCCCTGCTCCACGAGGCGCCACTGGT...CAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371500.8
CDS-3UTR CCA 90 bp TGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTACCATTCAAGTCAAGCTaGGCGCTCTCCGCGACGCAA +
Preference number: 4 (lower is better)
Translates to: CLLQGTDGQMDRADGELLPFKSS*ALSATQ
Trigger: TTGCGTCGCGGAGAGCGCCCAGCTTGACTTGAATGG...TAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395871.7
CDS-3UTR TCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGAGTTGCTGGACAGGATaGGGACCTCGACGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVSCWTG*GPRRCW
Trigger: CCAGCAACGTCGAGGTCCTCATCCTGTCCAGCAACT...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCGCGGCCAATGCCTGTaGTCTGGTTGTGCAGGATCA +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLRGQCL*SGCAGS
Trigger: TGATCCTGCACAACCAGATCACAGGCATTGGCCGCG...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp CTGGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGAGCAGTCGGTTGCTGGTaGGGTACAGCTCACGCAGCT +
Preference number: 4 (lower is better)
Translates to: LATEHGYPCVFSRERTDRAVGCW*GTAHAA
Trigger: AGCTGCGTGAGCTGTACCTCACCAGCAACCGACTGC...TCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGCAGTCGGTTGCTGGTaGGGTACAGCTCACGCAGCT +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCAVGCW*GTAHAA
Trigger: AGCTGCGTGAGCTGTACCTCACCAGCAACCGACTGC...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGGGATCTCTGTGAGCTaGTTCCCGGCGATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCGISVS*FPAMSS
Trigger: GCTGGACATCGCCGGGAATCAGCTCACAGAGATCCC...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGGGATCTCTGTGAGCTaGTTCCCGGCGATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMGISVS*FPAMSS
Trigger: GCTGGACATCGCCGGGAATCAGCTCACAGAGATCCC...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp ACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTCCTCGGGGATCTCTGTaGGCTGATTCCCGGCGATGT +
Preference number: 4 (lower is better)
Translates to: TVSARVMWDASCVQLGVSPRGSL*ADSRRC
Trigger: ACATCGCCGGGAATCAGCTCACAGAGATCCCCGAGG...AGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTACAGGTACTCAAGTaGCTCGGGGAGCCCCTCGGG +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGVQVLK*LGEPLG
Trigger: CCCGAGGGGCTCCCCGAGTCACTTGAGTACCTGTAC...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGGAAGGGGTGGGGATATaGGACTGTGTCAGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVEGVGI*DCVSPC
Trigger: ACACGGGCTGACACAGTCTCATATCCCCACCCCTTC...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTGCTGAGCTGGGTGTTTaGGGGTGTGATGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: QGTDGQMDRADGELLWLIAELGV*GCDVCA
Trigger: TGCACACACATCACACCCTCAAACACCCAGCTCAGC...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTAGACCCTTCCCTGCATaGTTCAGAGGGCGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCRPFPA*FRGRGS
Trigger: GCTGCCACGCCCTCTGAATCATGCAGGGAAGGGTCT...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTTCCCCCACAGGCCTaGAGAACAAAGGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: QGTDGQMDRADGELLWLILPPQA*RTKVSP
Trigger: AGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAG...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TTGGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCGGTGCCTGCAGGGGGTaGCGAGTCAGATGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LEGCSHMTCACVCVWCVCGACRG*RVRCAW
Trigger: CCAGGCGCATCTGACTCGGCACCCCCTGCAGGCACC...GCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGGCAGGAAGCGGGGTaGCAAGGTCAGCTTGTTATT +
Preference number: 4 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSWQEAG*QGQLVI
Trigger: AATAACAAGCTGACCTTGGCACCCCGCTTCCTGCCA...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGCGGCAGCCCGGCGTCTaGCAGCTTGTTGTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVRQPGV*QLVVVQ
Trigger: CTGCACAACAACAAGCTGGCAGACGCCGGGCTGCCG...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTCGGCAGCCCGGCGTCTaGCAGCTTGTTGTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLRQPGV*QLVVVQ
Trigger: CTGCACAACAACAAGCTGGCAGACGCCGGGCTGCCG...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TTGGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCGCGTGTGCAGCCGGTTaGCCGACAGGTCCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: LEGCSHMTCACVCVWCVCACAAG*PTGPAS
Trigger: GCTCGCTGGACCTGTCGGGCAACCGGCTGCACACGC...GCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TTGGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCCCAGGTGGCAGCGTGTaGAGCCGGTTGCCCGACAGG +
Preference number: 4 (lower is better)
Translates to: LEGCSHMTCACVCVWCVCPGGSV*SRLPDR
Trigger: CCTGTCGGGCAACCGGCTGCACACGCTGCCACCTGG...GCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTCACCAGCGCCCCTCGTaGCAAGGCAGCCAGCTCATT +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGHQRPS*QGSQLI
Trigger: AATGAGCTGGCTGCCTTGGCACGAGGGGCGCTGGTG...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGGCGATGTCCAGCAGCTaGAGATGGGCGAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVAMSSS*RWARST
Trigger: GGTGGACCTCGCCCATCTGCAGCTGCTGGACATCGC...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCACACAGGCGTGTGCTaGAGAAAAGAGTCCGGCGGT +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLHTGVC*RKESGG
Trigger: ACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTG...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGGGATGCCTCATGTGTaGAGCTGGGTGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRRGMPHV*SWVCLC
Trigger: ACACAGACACACCCAGCTGCACACATGAGGCATCCC...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp ACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGGGAGGGAATGGGTaGCTGTGTGTGCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TEHGYPCVFSRERTDRWTGGGNG*LCVPGQ
Trigger: CTGCCCTGGCACACACAGGCACCCATTCCCTCCCCC...TGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGTGCCCATTGGAAAAGTaGCTGTGTCCTGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVCPLEK*LCPARA
Trigger: CGCCCTGGCAGGACACAGGCACTTTTCCAATGGGCA...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTTGCCTCCACTGGGCTTaGCCATTGGAAAAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: QGTDGQMDRADGELLWLICLHWA*PLEKCL
Trigger: CAGGCACTTTTCCAATGGGCAAGCCCAGTGGAGGCA...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGCCTCTGCTTCACTCCTaGCCCAAGGCCCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VCMHTHTHVSRGREWVPVPLLHS*PKAPAA
Trigger: TGCTGCTGGGGCCTTGGGGCAGGAGTGAAGCAGAGG...CACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGGTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGCCTCTGCTTCACTCCTaGCCCAAGGCCCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: WCVCIRIHMSAGGGNGCLPLLHS*PKAPAA
Trigger: TGCTGCTGGGGCCTTGGGGCAGGAGTGAAGCAGAGG...CAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp ACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTACTTCGGCCAAATCCTaGGGCCCTCACGGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: TVSARVMWDASCVQLGVSTSAKS*GPHGKH
Trigger: GTGCTTGCCGTGAGGGCCCCAGGATTTGGCCGAAGT...AGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTACTTCGGCCAAATCCTaGGGCCCTCACGGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCTSAKS*GPHGKH
Trigger: GTGCTTGCCGTGAGGGCCCCAGGATTTGGCCGAAGT...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp TGGTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTCGGGGCTCAGGCTGTaGCCGCCACTTCGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: WCVCIRIHMSAGGGNGCLSGLRL*PPLRPN
Trigger: ATTTGGCCGAAGTGGCGGCCACAGCCTGAGCCCCGA...CAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GCCAGGCCAGCAGTCCTGAAGGCTCCTGTCCCCATAGGATGGGAAAGGAATAAATCCACGACGCCCTCCTaGGAACAGGCACAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: ARPAVLKAPVPIGWERNKSTTPS*EQAQSR
Trigger: CCGAGACTGTGCCTGTTCCCAGGAGGGCGTCGTGGA...TTTATTCCTTTCCCATCCTATGGGGACAGGAGCCTTCAGGACTGCTGGCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTTCCACGACGCCCTCCTaGGAACAGGCACAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGSTTPS*EQAQSR
Trigger: CCGAGACTGTGCCTGTTCCCAGGAGGGCGTCGTGGA...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGCTCAAACGCCTTCTCTaGGAGCCCTCGGGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: ETVSARVMWDASCVQLGVLKRLL*EPSGSQ
Trigger: CTGACTTCCCGAGGGCTCCCAGAGAAGGCGTTTGAG...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGACTGATCAGGGCGTTTaGCAGGAAGCGGGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: ETVSARVMWDASCVQLGVTDQGV*QEAGCQ
Trigger: TTGGCACCCCGCTTCCTGCCAAACGCCCTGATCAGT...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGAGGTGCTTGGGCACGTaGCGCAGGAAGTTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMRCLGT*RRKLLD
Trigger: GTCCAGCAACTTCCTGCGCCACGTGCCCAAGCACCT...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCCAGGTACTCCAGGCTaGAGAGCTTCCAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: QGTDGQMDRADGELLWLIPGTPG*RASRRS
Trigger: AGACCTTCTGGAAGCTCTCCAGCCTGGAGTACCTGG...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGCGTCCACGCTCCGGATaGCGTTCTTCTCCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVRPRSG*RSSPSA
Trigger: TGCACTTGGAGAAGAACGCCATCCGGAGCGTGGACG...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCGTCCACGCTCCGGATaGCGTTCTTCTCCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLRPRSG*RSSPSA
Trigger: TGCACTTGGAGAAGAACGCCATCCGGAGCGTGGACG...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCACTCCAGGCTGCGGATaGGGGTCAGCACATTCGCGT +
Preference number: 4 (lower is better)
Translates to: LILAGARAVCGIGFGGLFTPGCG*GSAHSR
Trigger: ACGCGAATGTGCTGACCCCCATCCGCAGCCTGGAGT...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TTGGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCGCCCTGGAAGGCCAGTaGGTGGATGCCCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: LEGCSHMTCACVCVWCVCALEGQ*VDALLP
Trigger: CGGGAGCAGGGCATCCACCCACTGGCCTTCCAGGGC...GCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTACCAGGAAGTAGGTGGTaGCAAAGTCTTCGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: CLLQGTDGQMDRADGELLPGSRW*QSLRGQ
Trigger: TTGGCCGCGAAGACTTTGCCACCACCTACTTCCTGG...TAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGCCTCCAGGAAGTAGGTaGTGGCAAAGTCTTCGCGGC +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVPPGSR*WQSLRG
Trigger: GCCGCGAAGACTTTGCCACCACCTACTTCCTGGAGG...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGGCAAGAGCTGTCTGTaGCATAGGCTTTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRRGKSCL*HRLWRA
Trigger: AGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCC...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCACTGGGCTTGCCCATTaGAAAAGTGCCTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: DRADGELLWLILAGARAVTGLAH*KSACVL
Trigger: CAGGACACAGGCACTTTTCCAATGGGCAAGCCCAGT...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGACTGGGCTTGCCCATTaGAAAAGTGCCTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: DGQMDRADGELLWLILAGTGLAH*KSACVL
Trigger: CAGGACACAGGCACTTTTCCAATGGGCAAGCCCAGT...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TTGGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCCCCGGTTCACACCAGTaGCGCCTCGTGGAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LEGCSHMTCACVCVWCVCPGSHQ*RLVEQG
Trigger: GCCCTGCTCCACGAGGCGCCACTGGTGTGAACCGGG...GCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371500.8
CDS-3UTR TCA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCAGTTGCTGGACAGGATaGGGACCTCGACGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LILAGARAVCGIGFGGLFSCWTG*GPRRCW
Trigger: CCAGCAACGTCGAGGTCCTCATCCTGTCCAGCAACT...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTAGTTGCTGGACAGGATaGGGACCTCGACGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCSCWTG*GPRRCW
Trigger: CCAGCAACGTCGAGGTCCTCATCCTGTCCAGCAACT...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCCAGCTTGTTGTTCTTaGGGTGCAGCTTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: QGTDGQMDRADGELLWLIPACCS*GAACTG
Trigger: CCCTGTACAAGCTGCACCTCAAGAACAACAAGCTGG...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGGGATCTCTGTGAGCTaGTTCCCGGCGATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGGISVS*FPAMSS
Trigger: GCTGGACATCGCCGGGAATCAGCTCACAGAGATCCC...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp TGGTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGCCTCGGGGATCTCTGTaGGCTGATTCCCGGCGATGT +
Preference number: 4 (lower is better)
Translates to: WCVCIRIHMSAGGGNGCLPRGSL*ADSRRC
Trigger: ACATCGCCGGGAATCAGCTCACAGAGATCCCCGAGG...CAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGCGGTAGTGGGGGTGTaGCAGAGACTGTGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMAVVGV*QRLWWF
Trigger: AAACCACCACAGTCTCTGTCACACCCCCACTACCGC...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTAGACCCTTCCCTGCATaGTTCAGAGGGCGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLRPFPA*FRGRGS
Trigger: GCTGCCACGCCCTCTGAATCATGCAGGGAAGGGTCT...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGGCGAGCTGCTATGGCTaGTTCTGGCTGGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: VCMHTHTHVSRGREWVPVASCYG*FWLGQE
Trigger: CTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGC...CACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGGGACTCTTAGCAGAGTaGCTGCCCAGCACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVGLLAE*LPSTWR
Trigger: CCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCC...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GCCAGGCCAGCAGTCCTGAAGGCTCCTGTCCCCATAGGATGGGAAAGGAATAAAGGACTCTTAGCAGAGTaGCTGCCCAGCACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ARPAVLKAPVPIGWERNKGLLAE*LPSTWR
Trigger: CCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCC...TTTATTCCTTTCCCATCCTATGGGGACAGGAGCCTTCAGGACTGCTGGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGGTCAGGCGGTTGTTTTaGAGGTTCAGCGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVVRRLF*RFSVSS
Trigger: GCTGGAGACGCTGAACCTGCAAAACAACCGCCTGAC...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCCAGCTTGTTGTTGTaGAGGTACACAGACCTCAAG +
Preference number: 4 (lower is better)
Translates to: DGQMDRADGELLWLILAGASLLL*RYTDLK
Trigger: CTTGAGGTCTGTGTACCTGCACAACAACAAGCTGGC...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATGCCAGCTTGTTGTTGTaGAGGTACACAGACCTCAAG +
Preference number: 4 (lower is better)
Translates to: PGNGRTDGQGRRRAAMADASLLL*RYTDLK
Trigger: CTTGAGGTCTGTGTACCTGCACAACAACAAGCTGGC...ATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCGCCAGCTTGTTGTTGTaGAGGTACACAGACCTCAAG +
Preference number: 4 (lower is better)
Translates to: DRADGELLWLILAGARAVASLLL*RYTDLK
Trigger: CTTGAGGTCTGTGTACCTGCACAACAACAAGCTGGC...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGTACAGGTGCACCGTGTaGAACCGCTTGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVYRCTV*NRLRPW
Trigger: CCAGGGCCTCAAGCGGTTGCACACGGTGCACCTGTA...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGCCTGTGATCTGGTTGTaGAGGATCATGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVPVIWL*RIMRVR
Trigger: GCGCACCCTCATGATCCTGCACAACCAGATCACAGG...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCCTGTGATCTGGTTGTaGAGGATCATGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLPVIWL*RIMRVR
Trigger: GCGCACCCTCATGATCCTGCACAACCAGATCACAGG...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp ACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGCGATGTCCAGCAGCTaGAGATGGGCGAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: TEHGYPCVFSRERTDRWTAMSSS*RWARST
Trigger: GGTGGACCTCGCCCATCTGCAGCTGCTGGACATCGC...TGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGTCAATGTCCAAGACCTaGAGGTGCTTCAGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLSMSKT*RCFSLR
Trigger: CCGGAGGCTGAAGCACCTGCAGGTCTTGGACATTGA...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp ACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTCACACAGGCGTGTGCTaGAGAAAAGAGTCCGGCGGT +
Preference number: 4 (lower is better)
Translates to: TVSARVMWDASCVQLGVSHTGVC*RKESGG
Trigger: ACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTG...AGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp CTGGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGACAGCACACAGGCGTGTaGTGCAGAAAAGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: LATEHGYPCVFSRERTDRQHTGV*CRKESG
Trigger: GCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTG...TCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGGGGATGCCTCATGTGTaGAGCTGGGTGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ETVSARVMWDASCVQLGVGMPHV*SWVCLC
Trigger: ACACAGACACACCCAGCTGCACACATGAGGCATCCC...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTGGGATGCCTCATGTGTaGAGCTGGGTGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGGMPHV*SWVCLC
Trigger: ACACAGACACACCCAGCTGCACACATGAGGCATCCC...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp ACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTCCGTGTCATGTGGGATaGCTCATGTGTGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TVSARVMWDASCVQLGVSPCHVG*LMCAAG
Trigger: CCCAGCTGCACACATGAGGCATCCCACATGACACGG...AGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCCCGTGTCATGTGGGATaGCTCATGTGTGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LILAGARAVCGIGFGGLFPCHVG*LMCAAG
Trigger: CCCAGCTGCACACATGAGGCATCCCACATGACACGG...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGCCGTGTCATGTGGGATaGCTCATGTGTGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMPCHVG*LMCAAG
Trigger: CCCAGCTGCACACATGAGGCATCCCACATGACACGG...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGGGCAGACCCTTCCCTaGATGATTCAGAGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGGQTLP*MIQRAW
Trigger: CCACGCCCTCTGAATCATGCAGGGAAGGGTCTGCCC...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATGGGGGAGGGAATGGGTaGCTGTGTGTGCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHGGGNG*LCVPGQ
Trigger: CTGCCCTGGCACACACAGGCACCCATTCCCTCCCCC...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCATGCCTCCACTGGGCTTaGCCATTGGAAAAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGACLHWA*PLEKCL
Trigger: CAGGCACTTTTCCAATGGGCAAGCCCAGTGGAGGCA...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp ACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACACCTCTGCTTCACTCCTaGCCCAAGGCCCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TEHGYPCVFSRERTDRWTPLLHS*PKAPAA
Trigger: TGCTGCTGGGGCCTTGGGGCAGGAGTGAAGCAGAGG...TGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGAAGGTGTCTCCTAGGTaGAGCTGGGTCCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMKVSPR*SWVLPP
Trigger: GGGAGGAAGGACCCAGCTGCACCTAGGAGACACCTT...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTACTTCGGCCAAATCCTaGGGCCCTCACGGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGTSAKS*GPHGKH
Trigger: GTGCTTGCCGTGAGGGCCCCAGGATTTGGCCGAAGT...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp ACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTCTCAAACGCCTTCTCTaGGAGCCCTCGGGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: TVSARVMWDASCVQLGVSLKRLL*EPSGSQ
Trigger: CTGACTTCCCGAGGGCTCCCAGAGAAGGCGTTTGAG...AGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp CTGGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGAACTGATCAGGGCGTTTaGCAGGAAGCGGGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: LATEHGYPCVFSRERTDRTDQGV*QEAGCQ
Trigger: TTGGCACCCCGCTTCCTGCCAAACGCCCTGATCAGT...TCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTAGGTGCTTGGGCACGTaGCGCAGGAAGTTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLRCLGT*RRKLLD
Trigger: GTCCAGCAACTTCCTGCGCCACGTGCCCAAGCACCT...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATCAGGCGGCAGGTGCTTaGGCACGTGGCGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHQAAGA*ARGAGS
Trigger: ACTTCCTGCGCCACGTGCCCAAGCACCTGCCGCCTG...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTCGTCCACGCTCCGGATaGCGTTCTTCTCCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCRPRSG*RSSPSA
Trigger: TGCACTTGGAGAAGAACGCCATCCGGAGCGTGGACG...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCACCAGGAAGTAGGTGGTaGCAAAGTCTTCGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGAPGSRW*QSLRGQ
Trigger: TTGGCCGCGAAGACTTTGCCACCACCTACTTCCTGG...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTCCTCCAGGAAGTAGGTaGTGGCAAAGTCTTCGCGGC +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCPPGSR*WQSLRG
Trigger: GCCGCGAAGACTTTGCCACCACCTACTTCCTGGAGG...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGAGCGGCCACGGTCCTTaGAAATGTCACCAAACTCTA +
Preference number: 4 (lower is better)
Translates to: DGQMDRADGELLWLILAGSGHGP*KCHQTL
Trigger: TAGAGTTTGGTGACATTTCCAAGGACCGTGGCCGCT...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TGGCAGGGAGGGACTCTTAGCAGAGTGACTGCCCAGCACCTGGAGGAGCAGGGTAGCGGCCACGGTCCTTaGAAATGTCACCAAACTCTA +
Preference number: 4 (lower is better)
Translates to: WQGGTLSRVTAQHLEEQGSGHGP*KCHQTL
Trigger: TAGAGTTTGGTGACATTTCCAAGGACCGTGGCCGCT...ACCCTGCTCCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCCCTCCCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGTGTGTGGCTGAGCTaGGTGTTTGAGGGTGTGATG +
Preference number: 4 (lower is better)
Translates to: CLLQGTDGQMDRADGELLCVWLS*VFEGVM
Trigger: CATCACACCCTCAAACACCCAGCTCAGCCACACACA...TAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGGGCAAGAGCTGTCTGTaGCATAGGCTTTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: ETVSARVMWDASCVQLGVGKSCL*HRLWRA
Trigger: AGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCC...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGGACGGCGAGCTGCTATaGCTGATTCTGGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVDGELL*LILAGA
Trigger: TGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTC...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGGACGGCGAGCTGCTATaGCTGATTCTGGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVDGELL*LILAGA
Trigger: TGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTC...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GCCAGGCCAGCAGTCCTGAAGGCTCCTGTCCCCATAGGATGGGAAAGGAATAAATCTCCTAGGTGCAGCTaGGTCCTTCCTCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ARPAVLKAPVPIGWERNKSPRCS*VLPPWL
Trigger: GAGCCAGGGAGGAAGGACCCAGCTGCACCTAGGAGA...TTTATTCCTTTCCCATCCTATGGGGACAGGAGCCTTCAGGACTGCTGGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp CTGGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGACAGCAAAGTCCACACTaGTCAGGGCGTTTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LATEHGYPCVFSRERTDRQQSPH*SGRLAG
Trigger: TCCTGCCAAACGCCCTGATCAGTGTGGACTTTGCTG...TCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCGCCCATAGATCTTGGTaGGATAGTTGGCAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: DRADGELLWLILAGARAVAHRSW*DSWQQS
Trigger: ACTTTGCTGCCAACTATCTCACCAAGATCTATGGGC...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCCCATAGATCTTGGTaGGATAGTTGGCAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: DGQMDRADGELLWLILAGAHRSW*DSWQQS
Trigger: ACTTTGCTGCCAACTATCTCACCAAGATCTATGGGC...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCACCAGCTTGTTGTTCTTaGGGTGCAGCTTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGAPACCS*GAACTG
Trigger: CCCTGTACAAGCTGCACCTCAAGAACAACAAGCTGG...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGCGCGGCCAATGCCTGTaGTCTGGTTGTGCAGGATCA +
Preference number: 4 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVRGQCL*SGCAGS
Trigger: TGATCCTGCACAACCAGATCACAGGCATTGGCCGCG...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCACCAGCTCATTGCGCTTaGCCTTCAGCACATGGACAT +
Preference number: 4 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGAPAHCA*PSAHGH
Trigger: ATGTCCATGTGCTGAAGGTCAAGCGCAATGAGCTGG...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCCAGCTCATTGCGCTTaGCCTTCAGCACATGGACAT +
Preference number: 4 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGPAHCA*PSAHGH
Trigger: ATGTCCATGTGCTGAAGGTCAAGCGCAATGAGCTGG...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGCCAGCTCATTGCGCTTaGCCTTCAGCACATGGACAT +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVPAHCA*PSAHGH
Trigger: ATGTCCATGTGCTGAAGGTCAAGCGCAATGAGCTGG...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp ACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGATCTCTGTGAGCTaGTTCCCGGCGATGTCCAGC +
Preference number: 4 (lower is better)
Translates to: TEHGYPCVFSRERTDRWTGISVS*FPAMSS
Trigger: GCTGGACATCGCCGGGAATCAGCTCACAGAGATCCC...TGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTGAAGGGGTGGGGATATaGGACTGTGTCAGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLEGVGI*DCVSPC
Trigger: ACACGGGCTGACACAGTCTCATATCCCCACCCCTTC...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGGAAGGGGTGGGGATATaGGACTGTGTCAGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVEGVGI*DCVSPC
Trigger: ACACGGGCTGACACAGTCTCATATCCCCACCCCTTC...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGAAGGGGTGGGGATATaGGACTGTGTCAGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGEGVGI*DCVSPC
Trigger: ACACGGGCTGACACAGTCTCATATCCCCACCCCTTC...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGCTGAGCTGGGTGTTTaGGGGTGTGATGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMAELGV*GCDVCA
Trigger: TGCACACACATCACACCCTCAAACACCCAGCTCAGC...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCGCTGAGCTGGGTGTTTaGGGGTGTGATGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: LILAGARAVCGIGFGGLFAELGV*GCDVCA
Trigger: TGCACACACATCACACCCTCAAACACCCAGCTCAGC...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGCTGAGCTGGGTGTTTaGGGGTGTGATGTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCAELGV*GCDVCA
Trigger: TGCACACACATCACACCCTCAAACACCCAGCTCAGC...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGCGGTAGTGGGGGTGTaGCAGAGACTGTGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGAVVGV*QRLWWF
Trigger: AAACCACCACAGTCTCTGTCACACCCCCACTACCGC...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp CTGGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGACTTCCCCCACAGGCCTaGAGAACAAAGGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LATEHGYPCVFSRERTDRLPPQA*RTKVSP
Trigger: AGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAG...TCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTCTTCCCCCACAGGCCTaGAGAACAAAGGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCLPPQA*RTKVSP
Trigger: AGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAG...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCATACACATGTCCCCCAGTCTCAGCTaGGCTCCGCGGGCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: HMTCACVCVWCVCIRIHMSPSLS*APRARA
Trigger: AGCCCGAGCCCGCGGAGCGCAGCTGAGACTGGGGGA...CATGTGTATGCGTATGCATACACACCACACACACACACATGCACAAGTCATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCGTCAGGCGGTTGTTTTaGAGGTTCAGCGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LILAGARAVCGIGFGGLFVRRLF*RFSVSS
Trigger: GCTGGAGACGCTGAACCTGCAAAACAACCGCCTGAC...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGTCAGGCGGTTGTTTTaGAGGTTCAGCGTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMVRRLF*RFSVSS
Trigger: GCTGGAGACGCTGAACCTGCAAAACAACCGCCTGAC...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGTGGCAGGAAGCGGGGTaGCAAGGTCAGCTTGTTATT +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVWQEAG*QGQLVI
Trigger: AATAACAAGCTGACCTTGGCACCCCGCTTCCTGCCA...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTGCCAGCTTGTTGTTGTaGAGGTACACAGACCTCAAG +
Preference number: 4 (lower is better)
Translates to: QGTDGQMDRADGELLWLIASLLL*RYTDLK
Trigger: CTTGAGGTCTGTGTACCTGCACAACAACAAGCTGGC...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGATTGTTGTTCTTGAGGTaGAGCTTGTACAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRRLLFLR*SLYRAG
Trigger: GCCTGCCCTGTACAAGCTGCACCTCAAGAACAACAA...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp ACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGCGTTGTTGTACAGGTaGACCGTGTGCAACCGCTTG +
Preference number: 4 (lower is better)
Translates to: TVSARVMWDASCVQLGVSALLYR*TVCNRL
Trigger: CAAGCGGTTGCACACGGTGCACCTGTACAACAACGC...AGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp ACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTCCTGTGATCTGGTTGTaGAGGATCATGAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: TVSARVMWDASCVQLGVSPVIWL*RIMRVR
Trigger: GCGCACCCTCATGATCCTGCACAACCAGATCACAGG...AGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATCACCAGCGCCCCTCGTaGCAAGGCAGCCAGCTCATT +
Preference number: 4 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHHQRPS*QGSQLI
Trigger: AATGAGCTGGCTGCCTTGGCACGAGGGGCGCTGGTG...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CTGGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATCAATGTCCAAGACCTaGAGGTGCTTCAGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LATEHGYPCVFSRERTDRSMSKT*RCFSLR
Trigger: CCGGAGGCTGAAGCACCTGCAGGTCTTGGACATTGA...TCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGCAGCACACAGGCGTGTaGTGCAGAAAAGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVQHTGV*CRKESG
Trigger: GCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTG...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTCAGCACACAGGCGTGTaGTGCAGAAAAGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLQHTGV*CRKESG
Trigger: GCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTG...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTCCGTGTCATGTGGGATaGCTCATGTGTGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLPCHVG*LMCAAG
Trigger: CCCAGCTGCACACATGAGGCATCCCACATGACACGG...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp TGGTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGCCCATTGGAAAAGTaGCTGTGTCCTGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: WCVCIRIHMSAGGGNGCLCPLEK*LCPARA
Trigger: CGCCCTGGCAGGACACAGGCACTTTTCCAATGGGCA...CAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGTGCCCATTGGAAAAGTaGCTGTGTCCTGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVCPLEK*LCPARA
Trigger: CGCCCTGGCAGGACACAGGCACTTTTCCAATGGGCA...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTTGCCCATTGGAAAAGTaGCTGTGTCCTGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGCPLEK*LCPARA
Trigger: CGCCCTGGCAGGACACAGGCACTTTTCCAATGGGCA...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGGTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGAAGGTGTCTCCTAGGTaGAGCTGGGTCCTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: WCVCIRIHMSAGGGNGCLKVSPR*SWVLPP
Trigger: GGGAGGAAGGACCCAGCTGCACCTAGGAGACACCTT...CAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGATCTGTAAACTCGGAATaGTGTGCGCCTGCAGATCAG +
Preference number: 4 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRRSVNSE*CAPADQ
Trigger: CTGATCTGCAGGCGCACAGCATTCCGAGTTTACAGA...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371500.8
CDS-3UTR GCA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGCCAGGCAGGCTGTTCTaGCTCCTCGCCTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVPGRLF*LLAFHL
Trigger: CAAATGGAAGGCGAGGAGGCAGAACAGCCTGCCTGG...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371500.8
ENST00000618387.1
CDS-3UTR GCA 90 bp TTGGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCAAATCTGTAAACTGCTaGGCCCCGGCGCCGAGCGGC +
Preference number: 4 (lower is better)
Translates to: LEGCSHMTCACVCVWCVCKSVNC*APAPSG
Trigger: GCCGCTCGGCGCCGGGGCGCAGCAGTTTACAGATTT...GCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618387.1
CDS-3UTR CCA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCATTCTGCAGAGATAGGTaGTTGGTGTGCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGAFCRDR*LVCSGR
Trigger: CCTGCCTGAGCACACCAACCACCTATCTCTGCAGAA...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGTTCTGCAGAGATAGGTaGTTGGTGTGCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVFCRDR*LVCSGR
Trigger: CCTGCCTGAGCACACCAACCACCTATCTCTGCAGAA...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTTCTGCAGAGATAGGTaGTTGGTGTGCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ETVSARVMWDASCVQLGVFCRDR*LVCSGR
Trigger: CCTGCCTGAGCACACCAACCACCTATCTCTGCAGAA...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp TGGTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGCTCAAACGCCTTCTCTaGGAGCCCTCGGGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: WCVCIRIHMSAGGGNGCLLKRLL*EPSGSQ
Trigger: CTGACTTCCCGAGGGCTCCCAGAGAAGGCGTTTGAG...CAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTACTGATCAGGGCGTTTaGCAGGAAGCGGGGTGCCAA +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGTDQGV*QEAGCQ
Trigger: TTGGCACCCCGCTTCCTGCCAAACGCCCTGATCAGT...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp ACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTCCAGGTACTCCAGGCTaGAGAGCTTCCAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: TVSARVMWDASCVQLGVSPGTPG*RASRRS
Trigger: AGACCTTCTGGAAGCTCTCCAGCCTGGAGTACCTGG...AGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGCGTCCACGCTCCGGATaGCGTTCTTCTCCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVRPRSG*RSSPSA
Trigger: TGCACTTGGAGAAGAACGCCATCCGGAGCGTGGACG...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCCAATGCCTGTGATCTaGTTGTGCAGGATCATGAGG +
Preference number: 4 (lower is better)
Translates to: QGTDGQMDRADGELLWLIPMPVI*LCRIMR
Trigger: CCTCATGATCCTGCACAACCAGATCACAGGCATTGG...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGCCTCCAGGAAGTAGGTaGTGGCAAAGTCTTCGCGGC +
Preference number: 4 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVPPGSR*WQSLRG
Trigger: GCCGCGAAGACTTTGCCACCACCTACTTCCTGGAGG...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp TGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTAAGCGGCCACGGTCCTTaGAAATGTCACCAAACTCTA +
Preference number: 4 (lower is better)
Translates to: CLLQGTDGQMDRADGELLSGHGP*KCHQTL
Trigger: TAGAGTTTGGTGACATTTCCAAGGACCGTGGCCGCT...TAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATGTGAGCACGGCAGAGTaGGGGGCTCACAGCACACAG +
Preference number: 4 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHVSTAE*GAHSTQ
Trigger: CTGTGTGCTGTGAGCCCCCCACTCTGCCGTGCTCAC...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TTGGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCGTGAGCACGGCAGAGTaGGGGGCTCACAGCACACAG +
Preference number: 4 (lower is better)
Translates to: LEGCSHMTCACVCVWCVCVSTAE*GAHSTQ
Trigger: CTGTGTGCTGTGAGCCCCCCACTCTGCCGTGCTCAC...GCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCTCAGCCCGTGTCATGTaGGATGCCTCATGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LILAGARAVCGIGFGGLFSARVM*DASCVQ
Trigger: CTGCACACATGAGGCATCCCACATGACACGGGCTGA...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTTCAGCCCGTGTCATGTaGGATGCCTCATGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCSARVM*DASCVQ
Trigger: CTGCACACATGAGGCATCCCACATGACACGGGCTGA...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGTGTGTGTGGCTGAGCTaGGTGTTTGAGGGTGTGATG +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVCVWLS*VFEGVM
Trigger: CATCACACCCTCAAACACCCAGCTCAGCCACACACA...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGTGTGTGTGGCTGAGCTaGGTGTTTGAGGGTGTGATG +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLCVWLS*VFEGVM
Trigger: CATCACACCCTCAAACACCCAGCTCAGCCACACACA...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp ACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGACGGCGAGCTGCTATaGCTGATTCTGGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: TEHGYPCVFSRERTDRWTDGELL*LILAGA
Trigger: TGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTC...TGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATGAACGGACGGACAGATaGACAGGGCAGACGGCGAGC +
Preference number: 4 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHERTDR*TGQTAS
Trigger: GCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTC...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATCGTTGCTGGAGCCGTTaGACATGTTGTCCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHRCWSR*TCCPAA
Trigger: GGCTGCCGGACAACATGTTCAACGGCTCCAGCAACG...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTCCAGCTTGTTGTTCTTaGGGTGCAGCTTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCPACCS*GAACTG
Trigger: CCCTGTACAAGCTGCACCTCAAGAACAACAAGCTGG...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGCCAGCTTGTTGTTCTTaGGGTGCAGCTTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMPACCS*GAACTG
Trigger: CCCTGTACAAGCTGCACCTCAAGAACAACAAGCTGG...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGCCAGCTCATTGCGCTTaGCCTTCAGCACATGGACAT +
Preference number: 4 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMPAHCA*PSAHGH
Trigger: ATGTCCATGTGCTGAAGGTCAAGCGCAATGAGCTGG...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp TTGGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCGCAGTCGGTTGCTGGTaGGGTACAGCTCACGCAGCT +
Preference number: 4 (lower is better)
Translates to: LEGCSHMTCACVCVWCVCAVGCW*GTAHAA
Trigger: AGCTGCGTGAGCTGTACCTCACCAGCAACCGACTGC...GCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp TTGGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCCCTCGGGGATCTCTGTaGGCTGATTCCCGGCGATGT +
Preference number: 4 (lower is better)
Translates to: LEGCSHMTCACVCVWCVCPRGSL*ADSRRC
Trigger: ACATCGCCGGGAATCAGCTCACAGAGATCCCCGAGG...GCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGGTAGTTGTGTGTGGCTaGGCTGGGTGTTTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVVVVCG*AGCLRV
Trigger: CACCCTCAAACACCCAGCTCAGCCACACACAACTAC...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp GTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGGTAGTTGTGTGTGGCTaGGCTGGGTGTTTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VCMHTHTHVSRGREWVPVVVVCG*AGCLRV
Trigger: CACCCTCAAACACCCAGCTCAGCCACACACAACTAC...CACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTAGTTGTGTGTGGCTaGGCTGGGTGTTTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGVVVCG*AGCLRV
Trigger: CACCCTCAAACACCCAGCTCAGCCACACACAACTAC...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR TCA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGAGGGCTGTTCGCACATaGCTTGTGCATGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMRAVRT*LVHVCV
Trigger: CACACACACATGCACAAGTCATGTGCGAACAGCCCT...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp ACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTAGGGCTGTTCGCACATaGCTTGTGCATGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TVSARVMWDASCVQLGVSRAVRT*LVHVCV
Trigger: CACACACACATGCACAAGTCATGTGCGAACAGCCCT...AGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATGGACTCTTAGCAGAGTaGCTGCCCAGCACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHGLLAE*LPSTWR
Trigger: CCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCC...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCATACACATGGGTGCCTGCAGGGGGTaGCGAGTCAGATGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: HMTCACVCVWCVCIRIHMGACRG*RVRCAW
Trigger: CCAGGCGCATCTGACTCGGCACCCCCTGCAGGCACC...CATGTGTATGCGTATGCATACACACCACACACACACACATGCACAAGTCATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCCAGCTGGTTGTTCTaGAGAGATAGGTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: ETVSARVMWDASCVQLGVSSWLF*RDRWLV
Trigger: CACCAACCACCTATCTCTGCAGAACAACCAGCTGGA...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGTTGAGGTTGGTCAGATaGTCAAACGCCTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLLRLVR*SNAFSG
Trigger: CCCAGAGAAGGCGTTTGAGCATCTGACCAACCTCAA...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGTGGCAGGAAGCGGGGTaGCAAGGTCAGCTTGTTATT +
Preference number: 4 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMWQEAG*QGQLVI
Trigger: AATAACAAGCTGACCTTGGCACCCCGCTTCCTGCCA...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCATTGTTGTTCTTGAGGTaGAGCTTGTACAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGALLFLR*SLYRAG
Trigger: GCCTGCCCTGTACAAGCTGCACCTCAAGAACAACAA...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATTACAGGTGCACCGTGTaGAACCGCTTGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHYRCTV*NRLRPW
Trigger: CCAGGGCCTCAAGCGGTTGCACACGGTGCACCTGTA...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGGCGTTGTTGTACAGGTaGACCGTGTGCAACCGCTTG +
Preference number: 4 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVALLYR*TVCNRL
Trigger: CAAGCGGTTGCACACGGTGCACCTGTACAACAACGC...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp CACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCATACACATGGCGTCGCGGTGCACCTaGGGGCTGGTGATGCGGTTG +
Preference number: 4 (lower is better)
Translates to: HMTCACVCVWCVCIRIHMASRCT*GLVMRL
Trigger: CAACCGCATCACCAGCCCGCAGGTGCACCGCGACGC...CATGTGTATGCGTATGCATACACACCACACACACACACATGCACAAGTCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCATACACATGCGGAAGGCGTCGCGGTaGACCTGCGGGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: HMTCACVCVWCVCIRIHMRKASR*TCGLVM
Trigger: CATCACCAGCCCGCAGGTGCACCGCGACGCCTTCCG...CATGTGTATGCGTATGCATACACACCACACACACACACATGCACAAGTCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCGTCCTAGGTCACATCTaGATCACCTTGTCACTATCT +
Preference number: 4 (lower is better)
Translates to: DRADGELLWLILAGARAVVLGHI*ITLSLS
Trigger: AGATAGTGACAAGGTGATGCAGATGTGACCTAGGAC...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GCCAGGCCAGCAGTCCTGAAGGCTCCTGTCCCCATAGGATGGGAAAGGAATAAAGGGATGCCTCATGTGTaGAGCTGGGTGTGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: ARPAVLKAPVPIGWERNKGMPHV*SWVCLC
Trigger: ACACAGACACACCCAGCTGCACACATGAGGCATCCC...TTTATTCCTTTCCCATCCTATGGGGACAGGAGCCTTCAGGACTGCTGGCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGTGCCTCCACTGGGCTTaGCCATTGGAAAAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVCLHWA*PLEKCL
Trigger: CAGGCACTTTTCCAATGGGCAAGCCCAGTGGAGGCA...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp ACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAAAACTCGGAATGCTGTaGGCCTGCAGATCAGCCGGC +
Preference number: 4 (lower is better)
Translates to: TEHGYPCVFSRERTDRWTKLGML*ACRSAG
Trigger: GCCGGCTGATCTGCAGGCGCACAGCATTCCGAGTTT...TGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371500.8
CDS-3UTR CCA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACTTCGGCCAAATCCTaGGGCCCTCACGGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHTSAKS*GPHGKH
Trigger: GTGCTTGCCGTGAGGGCCCCAGGATTTGGCCGAAGT...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGCCAATGCCTGTGATCTaGTTGTGCAGGATCATGAGG +
Preference number: 4 (lower is better)
Translates to: ETVSARVMWDASCVQLGVPMPVI*LCRIMR
Trigger: CCTCATGATCCTGCACAACCAGATCACAGGCATTGG...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGCCAATGCCTGTGATCTaGTTGTGCAGGATCATGAGG +
Preference number: 4 (lower is better)
Translates to: VSARVMWDASCVQLGVSVPMPVI*LCRIMR
Trigger: CCTCATGATCCTGCACAACCAGATCACAGGCATTGG...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTCCAGGAAGTAGGTGGTaGCAAAGTCTTCGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGPGSRW*QSLRGQ
Trigger: TTGGCCGCGAAGACTTTGCCACCACCTACTTCCTGG...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGAGCGGCCACGGTCCTTaGAAATGTCACCAAACTCTA +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLSGHGP*KCHQTL
Trigger: TAGAGTTTGGTGACATTTCCAAGGACCGTGGCCGCT...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGTCAGCCCGTGTCATGTaGGATGCCTCATGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVSARVM*DASCVQ
Trigger: CTGCACACATGAGGCATCCCACATGACACGGGCTGA...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTTCAGCCCGTGTCATGTaGGATGCCTCATGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGSARVM*DASCVQ
Trigger: CTGCACACATGAGGCATCCCACATGACACGGGCTGA...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGAGACTGTGGTGGTTTaGAGGGTAGTTGTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCETVVV*RVVVCG
Trigger: GCCACACACAACTACCCTCCAAACCACCACAGTCTC...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp ACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGAGACTGTGGTGGTTTaGAGGGTAGTTGTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: TVSARVMWDASCVQLGVSETVVV*RVVVCG
Trigger: GCCACACACAACTACCCTCCAAACCACCACAGTCTC...AGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCATGTGTGTGTGTGTaGTGTGTATGCATACGCATA +
Preference number: 4 (lower is better)
Translates to: DGQMDRADGELLWLILAGACVCV*CVCIRI
Trigger: TATGCGTATGCATACACACCACACACACACACATGC...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGGGCAAGAGCTGTCTGTaGCATAGGCTTTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VCMHTHTHVSRGREWVPVGKSCL*HRLWRA
Trigger: AGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCC...CACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCCAAGTACAGGTAATTaGGGTTGGTCAGATGCTCAA +
Preference number: 4 (lower is better)
Translates to: QGTDGQMDRADGELLWLIPSTGN*GWSDAQ
Trigger: TTGAGCATCTGACCAACCTCAATTACCTGTACTTGG...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGCCAGCTCATTGCGCTTaGCCTTCAGCACATGGACAT +
Preference number: 4 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVPAHCA*PSAHGH
Trigger: ATGTCCATGTGCTGAAGGTCAAGCGCAATGAGCTGG...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATGCGGTAGTGGGGGTGTaGCAGAGACTGTGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHAVVGV*QRLWWF
Trigger: AAACCACCACAGTCTCTGTCACACCCCCACTACCGC...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTAGGGCTGTTCGCACATaGCTTGTGCATGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGRAVRT*LVHVCV
Trigger: CACACACACATGCACAAGTCATGTGCGAACAGCCCT...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGAGGGCTGTTCGCACATaGCTTGTGCATGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVRAVRT*LVHVCV
Trigger: CACACACACATGCACAAGTCATGTGCGAACAGCCCT...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTTCCAGCTGGTTGTTCTaGAGAGATAGGTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCSSWLF*RDRWLV
Trigger: CACCAACCACCTATCTCTGCAGAACAACCAGCTGGA...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp ACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTTTGAGGTTGGTCAGATaGTCAAACGCCTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: TVSARVMWDASCVQLGVSLRLVR*SNAFSG
Trigger: CCCAGAGAAGGCGTTTGAGCATCTGACCAACCTCAA...AGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GCCAGGCCAGCAGTCCTGAAGGCTCCTGTCCCCATAGGATGGGAAAGGAATAAATGGCAGGAAGCGGGGTaGCAAGGTCAGCTTGTTATT +
Preference number: 4 (lower is better)
Translates to: ARPAVLKAPVPIGWERNKWQEAG*QGQLVI
Trigger: AATAACAAGCTGACCTTGGCACCCCGCTTCCTGCCA...TTTATTCCTTTCCCATCCTATGGGGACAGGAGCCTTCAGGACTGCTGGCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCTTGTTGTTCTTGAGGTaGAGCTTGTACAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LILAGARAVCGIGFGGLFLLFLR*SLYRAG
Trigger: GCCTGCCCTGTACAAGCTGCACCTCAAGAACAACAA...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp ACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGCGTTGTTGTACAGGTaGACCGTGTGCAACCGCTTG +
Preference number: 4 (lower is better)
Translates to: TEHGYPCVFSRERTDRWTALLYR*TVCNRL
Trigger: CAAGCGGTTGCACACGGTGCACCTGTACAACAACGC...TGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGGCAGGGAGGGACTCTTAGCAGAGTGACTGCCCAGCACCTGGAGGAGCAGGGTCACCAAACTCTAAGTTaGCTTCAATGTCCAAGACCT +
Preference number: 4 (lower is better)
Translates to: WQGGTLSRVTAQHLEEQGHQTLS*LQCPRP
Trigger: AGGTCTTGGACATTGAAGGCAACTTAGAGTTTGGTG...ACCCTGCTCCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCCCTCCCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCCACCAAACTCTAAGTTaGCTTCAATGTCCAAGACCT +
Preference number: 4 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSHQTLS*LQCPRP
Trigger: AGGTCTTGGACATTGAAGGCAACTTAGAGTTTGGTG...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCACCAAACTCTAAGTTaGCTTCAATGTCCAAGACCT +
Preference number: 4 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVHQTLS*LQCPRP
Trigger: AGGTCTTGGACATTGAAGGCAACTTAGAGTTTGGTG...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATCACACAGGCGTGTGCTaGAGAAAAGAGTCCGGCGGT +
Preference number: 4 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHHTGVC*RKESGG
Trigger: ACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTG...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TTGGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCCAGCACACAGGCGTGTaGTGCAGAAAAGAGTCCGGC +
Preference number: 4 (lower is better)
Translates to: LEGCSHMTCACVCVWCVCQHTGV*CRKESG
Trigger: GCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTG...GCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCCAGCTTGTTGTTCTaGAGAGATAGGTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: ETVSARVMWDASCVQLGVSSLLF*RDRWLV
Trigger: CACCAACCACCTATCTCTGCAGAACAACAAGCTGGA...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673956.1
CDS-3UTR CCA 90 bp CACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCATACACATGCGAGTCAGATGCGCCTaGGCGCCAGGGCTGACGGAA +
Preference number: 4 (lower is better)
Translates to: HMTCACVCVWCVCIRIHMRVRCA*APGLTE
Trigger: TTCCGTCAGCCCTGGCGCCCAGGCGCATCTGACTCG...CATGTGTATGCGTATGCATACACACCACACACACACACATGCACAAGTCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGTTCTGCAGAGATAGGTaGTTGGTGTGCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVFCRDR*LVCSGR
Trigger: CCTGCCTGAGCACACCAACCACCTATCTCTGCAGAA...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GCCAGGCCAGCAGTCCTGAAGGCTCCTGTCCCCATAGGATGGGAAAGGAATAAATTCTGCAGAGATAGGTaGTTGGTGTGCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ARPAVLKAPVPIGWERNKFCRDR*LVCSGR
Trigger: CCTGCCTGAGCACACCAACCACCTATCTCTGCAGAA...TTTATTCCTTTCCCATCCTATGGGGACAGGAGCCTTCAGGACTGCTGGCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCCACAGACCTCAAGTTTaGCTTCTGGCCAAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LILAGARAVCGIGFGGLFHRPQV*LLAKGE
Trigger: CTCACCTTTGGCCAGAAGCCAAACTTGAGGTCTGTG...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTCACAGACCTCAAGTTTaGCTTCTGGCCAAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCHRPQV*LLAKGE
Trigger: CTCACCTTTGGCCAGAAGCCAAACTTGAGGTCTGTG...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp ACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACACCAGGAAGTAGGTGGTaGCAAAGTCTTCGCGGCCAA +
Preference number: 4 (lower is better)
Translates to: TEHGYPCVFSRERTDRWTPGSRW*QSLRGQ
Trigger: TTGGCCGCGAAGACTTTGCCACCACCTACTTCCTGG...TGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATCCTCCAGGAAGTAGGTaGTGGCAAAGTCTTCGCGGC +
Preference number: 4 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHPPGSR*WQSLRG
Trigger: GCCGCGAAGACTTTGCCACCACCTACTTCCTGGAGG...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTAGCGGCCACGGTCCTTaGAAATGTCACCAAACTCTA +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCSGHGP*KCHQTL
Trigger: TAGAGTTTGGTGACATTTCCAAGGACCGTGGCCGCT...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGTGTGGCTGAGCTaGGTGTTTGAGGGTGTGATG +
Preference number: 4 (lower is better)
Translates to: VCMHTHTHVSRGREWVPVCVWLS*VFEGVM
Trigger: CATCACACCCTCAAACACCCAGCTCAGCCACACACA...CACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp CTGGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGAGCCCATAGATCTTGGTaGGATAGTTGGCAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: LATEHGYPCVFSRERTDRAHRSW*DSWQQS
Trigger: ACTTTGCTGCCAACTATCTCACCAAGATCTATGGGC...TCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGCCCATAGATCTTGGTaGGATAGTTGGCAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMAHRSW*DSWQQS
Trigger: ACTTTGCTGCCAACTATCTCACCAAGATCTATGGGC...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTTCCAGCTGGTTGTTCTaGAGAGATAGGTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGSSWLF*RDRWLV
Trigger: CACCAACCACCTATCTCTGCAGAACAACCAGCTGGA...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GCCAGGCCAGCAGTCCTGAAGGCTCCTGTCCCCATAGGATGGGAAAGGAATAAATTGAGGTTGGTCAGATaGTCAAACGCCTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ARPAVLKAPVPIGWERNKLRLVR*SNAFSG
Trigger: CCCAGAGAAGGCGTTTGAGCATCTGACCAACCTCAA...TTTATTCCTTTCCCATCCTATGGGGACAGGAGCCTTCAGGACTGCTGGCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGGCAGGGAGGGACTCTTAGCAGAGTGACTGCCCAGCACCTGGAGGAGCAGGGTCTAATCTTGTTGTTCTaGAGGTACAGGTACTCAAGT +
Preference number: 4 (lower is better)
Translates to: WQGGTLSRVTAQHLEEQGLILLF*RYRYSS
Trigger: ACTTGAGTACCTGTACCTGCAGAACAACAAGATTAG...ACCCTGCTCCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCCCTCCCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGGTCCTAGGTCACATCTaGATCACCTTGTCACTATCT +
Preference number: 4 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLVLGHI*ITLSLS
Trigger: AGATAGTGACAAGGTGATGCAGATGTGACCTAGGAC...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGGCATGTGTGTGTGTGTaGTGTGTATGCATACGCATA +
Preference number: 4 (lower is better)
Translates to: ETVSARVMWDASCVQLGVACVCV*CVCIRI
Trigger: TATGCGTATGCATACACACCACACACACACACATGC...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp CACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCATACACATGGAACGGACGGACAGATaGACAGGGCAGACGGCGAGC +
Preference number: 4 (lower is better)
Translates to: HMTCACVCVWCVCIRIHMERTDR*TGQTAS
Trigger: GCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTC...CATGTGTATGCGTATGCATACACACCACACACACACACATGCACAAGTCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp ACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAACTGGGCTTGCCCATTaGAAAAGTGCCTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TEHGYPCVFSRERTDRWTTGLAH*KSACVL
Trigger: CAGGACACAGGCACTTTTCCAATGGGCAAGCCCAGT...TGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp CACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCATACACATGAGACCCTTCCCTGCATaGTTCAGAGGGCGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: HMTCACVCVWCVCIRIHMRPFPA*FRGRGS
Trigger: GCTGCCACGCCCTCTGAATCATGCAGGGAAGGGTCT...CATGTGTATGCGTATGCATACACACCACACACACACACATGCACAAGTCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp CACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCATACACATGGCGAGCTGCTATGGCTaGTTCTGGCTGGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: HMTCACVCVWCVCIRIHMASCYG*FWLGQE
Trigger: CTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGC...CATGTGTATGCGTATGCATACACACCACACACACACACATGCACAAGTCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp ACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACATTGAGGTTGGTCAGATaGTCAAACGCCTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: TEHGYPCVFSRERTDRWTLRLVR*SNAFSG
Trigger: CCCAGAGAAGGCGTTTGAGCATCTGACCAACCTCAA...TGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTACTAATCTTGTTGTTCTaGAGGTACAGGTACTCAAGT +
Preference number: 4 (lower is better)
Translates to: CLLQGTDGQMDRADGELLLILLF*RYRYSS
Trigger: ACTTGAGTACCTGTACCTGCAGAACAACAAGATTAG...TAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGTCCTAGGTCACATCTaGATCACCTTGTCACTATCT +
Preference number: 4 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCVLGHI*ITLSLS
Trigger: AGATAGTGACAAGGTGATGCAGATGTGACCTAGGAC...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGTCCTAGGTCACATCTaGATCACCTTGTCACTATCT +
Preference number: 4 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMVLGHI*ITLSLS
Trigger: AGATAGTGACAAGGTGATGCAGATGTGACCTAGGAC...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp TGGTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGCCAAGTACAGGTAATTaGGGTTGGTCAGATGCTCAA +
Preference number: 4 (lower is better)
Translates to: WCVCIRIHMSAGGGNGCLPSTGN*GWSDAQ
Trigger: TTGAGCATCTGACCAACCTCAATTACCTGTACTTGG...CAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGGTCCTAGGTCACATCTaGATCACCTTGTCACTATCT +
Preference number: 4 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVVLGHI*ITLSLS
Trigger: AGATAGTGACAAGGTGATGCAGATGTGACCTAGGAC...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATCACAGACCTCAAGTTTaGCTTCTGGCCAAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHHRPQV*LLAKGE
Trigger: CTCACCTTTGGCCAGAAGCCAAACTTGAGGTCTGTG...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp TTGGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCCCAATGCCTGTGATCTaGTTGTGCAGGATCATGAGG +
Preference number: 4 (lower is better)
Translates to: LEGCSHMTCACVCVWCVCPMPVI*LCRIMR
Trigger: CCTCATGATCCTGCACAACCAGATCACAGGCATTGG...GCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTGCATGTGTGTGTGTGTaGTGTGTATGCATACGCATA +
Preference number: 4 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLACVCV*CVCIRI
Trigger: TATGCGTATGCATACACACCACACACACACACATGC...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp CACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCATACACATGCAGCAAAGTCCACACTaGTCAGGGCGTTTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: HMTCACVCVWCVCIRIHMQQSPH*SGRLAG
Trigger: TCCTGCCAAACGCCCTGATCAGTGTGGACTTTGCTG...CATGTGTATGCGTATGCATACACACCACACACACACACATGCACAAGTCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp CACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCATACACATGGTAGTTGTGTGTGGCTaGGCTGGGTGTTTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: HMTCACVCVWCVCIRIHMVVVCG*AGCLRV
Trigger: CACCCTCAAACACCCAGCTCAGCCACACACAACTAC...CATGTGTATGCGTATGCATACACACCACACACACACACATGCACAAGTCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp ACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTCTAATCTTGTTGTTCTaGAGGTACAGGTACTCAAGT +
Preference number: 4 (lower is better)
Translates to: TVSARVMWDASCVQLGVSLILLF*RYRYSS
Trigger: ACTTGAGTACCTGTACCTGCAGAACAACAAGATTAG...AGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR GCA 90 bp CTGGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGACTAATCTTGTTGTTCTaGAGGTACAGGTACTCAAGT +
Preference number: 4 (lower is better)
Translates to: LATEHGYPCVFSRERTDRLILLF*RYRYSS
Trigger: ACTTGAGTACCTGTACCTGCAGAACAACAAGATTAG...TCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTCACCAAACTCTAAGTTaGCTTCAATGTCCAAGACCT +
Preference number: 4 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGHQTLS*LQCPRP
Trigger: AGGTCTTGGACATTGAAGGCAACTTAGAGTTTGGTG...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp CACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCATACACATGCCAGGTACTCCAGGCTaGAGAGCTTCCAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: HMTCACVCVWCVCIRIHMPGTPG*RASRRS
Trigger: AGACCTTCTGGAAGCTCTCCAGCCTGGAGTACCTGG...CATGTGTATGCGTATGCATACACACCACACACACACACATGCACAAGTCATGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp CACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCATACACATGGGCAAGAGCTGTCTGTaGCATAGGCTTTGGAGGGCT +
Preference number: 4 (lower is better)
Translates to: HMTCACVCVWCVCIRIHMGKSCL*HRLWRA
Trigger: AGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCC...CATGTGTATGCGTATGCATACACACCACACACACACACATGCACAAGTCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR TCA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATCCAAGTACAGGTAATTaGGGTTGGTCAGATGCTCAA +
Preference number: 4 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHPSTGN*GWSDAQ
Trigger: TTGAGCATCTGACCAACCTCAATTACCTGTACTTGG...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR GCA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTCTAATCTTGTTGTTCTaGAGGTACAGGTACTCAAGT +
Preference number: 4 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLLILLF*RYRYSS
Trigger: ACTTGAGTACCTGTACCTGCAGAACAACAAGATTAG...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CCA 90 bp CACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCATACACATGGAGACTGTGGTGGTTTaGAGGGTAGTTGTGTGTGGC +
Preference number: 4 (lower is better)
Translates to: HMTCACVCVWCVCIRIHMETVVV*RVVVCG
Trigger: GCCACACACAACTACCCTCCAAACCACCACAGTCTC...CATGTGTATGCGTATGCATACACACCACACACACACACATGCACAAGTCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CCA 90 bp CACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCATACACATGCACAGACCTCAAGTTTaGCTTCTGGCCAAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: HMTCACVCVWCVCIRIHMHRPQV*LLAKGE
Trigger: CTCACCTTTGGCCAGAAGCCAAACTTGAGGTCTGTG...CATGTGTATGCGTATGCATACACACCACACACACACACATGCACAAGTCATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS GCA 90 bp CACCCGGCTCTGGGCCATGGTGCCTGCAGGGGGTGCCGAGTCAGATaGGCCTGGGCGCCAGGGCTGACGGAACCTGCTGCGCCCCGGCGC +
Preference number: 5 (lower is better)
Translates to: HPALGHGACRGCRVR*AWAPGLTEPAAPRR
Trigger: GCGCCGGGGCGCAGCAGGTTCCGTCAGCCCTGGCGCCCAGGCGCATCTGACTCGGCACCCCCTGCAGGCACCATGGCCCAGAGCCGGGTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312553.10
ENST00000395871.7
ENST00000673956.1
CDS GCA 90 bp GCGGCAGCAGCAGCAGGAGCAGCAGCACCCGGCTCTGGGCCATGGTaGCTGCAGGGGGTGCCGAGTCAGATGCGCCTGGGCGCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: AAAAAGAAAPGSGPW*LQGVPSQMRLGARA
Trigger: AGCCCTGGCGCCCAGGCGCATCTGACTCGGCACCCCCTGCAGGCACCATGGCCCAGAGCCGGGTGCTGCTGCTCCTGCTGCTGCTGCCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673702.1
ENST00000673956.1
CDS CCA 90 bp GTGGCGGCAGCAGCAGCAGGAGCAGCAGCACCCGGCTCTGGGCCATaGTGCCTGCAGGGGGTGCCGAGTCAGATGCGCCTGGGCGCCAGG +
Preference number: 5 (lower is better)
Translates to: VAAAAAGAAAPGSGP*CLQGVPSQMRLGAR
Trigger: CCTGGCGCCCAGGCGCATCTGACTCGGCACCCCCTGCAGGCACCATGGCCCAGAGCCGGGTGCTGCTGCTCCTGCTGCTGCTGCCGCCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673702.1
ENST00000673956.1
CDS GCA 90 bp CAGCAGCAGCAGGAGCAGCAGCACCCGGCTCTGGGCCATGGTGCCTaGAGGGGGTGCCGAGTCAGATGCGCCTGGGCGCCAGGGCTGACG +
Preference number: 5 (lower is better)
Translates to: QQQQEQQHPALGHGA*RGCRVRCAWAPGLT
Trigger: CGTCAGCCCTGGCGCCCAGGCGCATCTGACTCGGCACCCCCTGCAGGCACCATGGCCCAGAGCCGGGTGCTGCTGCTCCTGCTGCTGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673702.1
ENST00000673956.1
CDS GCA 90 bp GCCGAGCGGCGCCCCACAGGCCGAACGCGCTCCCCCAGTCTCAGCTaGGCTCCGCGGGCTCGGGCTCCTTCCATTCAAGTCAAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: AERRPTGRTRSPSLS*APRARAPSIQVKLG
Trigger: GCCCAGCTTGACTTGAATGGAAGGAGCCCGAGCCCGCGGAGCGCAGCTGAGACTGGGGGAGCGCGTTCGGCCTGTGGGGCGCCGCTCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395871.7
CDS GCA 90 bp CACCCGGCTCTGGGCCATGGTGCCTGCAGGGGGTGCCGAGTCAGATaGGCCTGGGCGCCAGGGCTGACGGAACCAGGCAGGCTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: HPALGHGACRGCRVR*AWAPGLTEPGRLFC
Trigger: GCAGAACAGCCTGCCTGGTTCCGTCAGCCCTGGCGCCCAGGCGCATCTGACTCGGCACCCCCTGCAGGCACCATGGCCCAGAGCCGGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371500.8
ENST00000618387.1
ENST00000673702.1
CDS GCA 90 bp CTTCGGCCAAATCCTGGGGCCCTCACGGCAAGCACAGGTCCCAGGTaGAGCTGTGGCGGCAGCAGCAGCAGGAGCAGCAGCACCCGGCTC +
Preference number: 5 (lower is better)
Translates to: LRPNPGALTASTGPR*SCGGSSSRSSSTRL
Trigger: GAGCCGGGTGCTGCTGCTCCTGCTGCTGCTGCCGCCACAGCTGCACCTGGGACCTGTGCTTGCCGTGAGGGCCCCAGGATTTGGCCGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673702.1
ENST00000673956.1
CDS GCA 90 bp TGCCTCGCCACTGACTGTAAGCACAGGGCAGGGAACGCCGGGCCCTaGCTCCATGCCCAGCCCCTACACAGGACCAGAGGCCCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: CLATDCKHRAGNAGP*LHAQPLHRTRGPVQ
Trigger: CTGCACTGGGCCTCTGGTCCTGTGTAGGGGCTGGGCATGGAGGCAGGGCCCGGCGTTCCCTGCCCTGTGCTTACAGTCAGTGGCGAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471210.1
CDS CCA 90 bp AAATCCTGGGGCCCTCACGGCAAGCACAGGTCCCAGGTGCAGCTGTaGCGGCAGCAGCAGCAGGAGCAGCAGCACCCGGCTCTGGGCCAT +
Preference number: 5 (lower is better)
Translates to: KSWGPHGKHRSQVQL*RQQQQEQQHPALGH
Trigger: ATGGCCCAGAGCCGGGTGCTGCTGCTCCTGCTGCTGCTGCCGCCACAGCTGCACCTGGGACCTGTGCTTGCCGTGAGGGCCCCAGGATTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673702.1
ENST00000673956.1
CDS CCA 90 bp GTTCTCTTCGGGGCTCAGGCTGTGGCCGCCACTTCGGCCAAATCCTaGGGCCCTCACGGCAAGCACAGGTCCCAGGTGCAGCTGTGGCGG +
Preference number: 5 (lower is better)
Translates to: VLFGAQAVAATSAKS*GPHGKHRSQVQLWR
Trigger: CCGCCACAGCTGCACCTGGGACCTGTGCTTGCCGTGAGGGCCCCAGGATTTGGCCGAAGTGGCGGCCACAGCCTGAGCCCCGAAGAGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673702.1
ENST00000673956.1
CDS CCA 90 bp GGGAACTCACGCAGGTCAATACCGCCACAGTCCACGACGCCCTCCTaGGAACAGGCACAGTCTCGGGGGCAGCTGACCGCGGCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: GNSRRSIPPQSTTPS*EQAQSRGQLTAAGP
Trigger: TGGCCCAGCCGCGGTCAGCTGCCCCCGAGACTGTGCCTGTTCCCAGGAGGGCGTCGTGGACTGTGGCGGTATTGACCTGCGTGAGTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTGTCCGCAGCAGGCGCAGCTaGCGGAAGGCGTCGCGGTGC +
Preference number: 5 (lower is better)
Translates to: DRADGELLWLILAGARAVRSRRS*RKASRC
Trigger: GCACCGCGACGCCTTCCGCAAGCTGCGCCTGCTGCG...GACAGCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS GCA 90 bp CCACGCTCCGGATGGCGTTCTTCTCCAAGTGCAGCAGCACCAGGCTaGGCGGCAGCCCAGCTGGGACCCGAGACAGGTTGTTGCTGGACA +
Preference number: 5 (lower is better)
Translates to: PRSGWRSSPSAAAPG*AAAQLGPETGCCWT
Trigger: TGTCCAGCAACAACCTGTCTCGGGTCCCAGCTGGGCTGCCGCGCAGCCTGGTGCTGCTGCACTTGGAGAAGAACGCCATCCGGAGCGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCACGCAGCAGGCGCAGCTaGCGGAAGGCGTCGCGGTGC +
Preference number: 5 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGARSRRS*RKASRC
Trigger: GCACCGCGACGCCTTCCGCAAGCTGCGCCTGCTGCG...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCGCAGCAGGCGCAGCTaGCGGAAGGCGTCGCGGTGC +
Preference number: 5 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGRSRRS*RKASRC
Trigger: GCACCGCGACGCCTTCCGCAAGCTGCGCCTGCTGCG...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS TCA 90 bp TGCCCACCAGCGCCCCTCGTGCCAAGGCAGCCAGCTCATTGCGCTTaGCCTTCAGCACATGGACATTTCGAGGCAGCCCAGGTGGCAGCG +
Preference number: 5 (lower is better)
Translates to: CPPAPLVPRQPAHCA*PSAHGHFEAAQVAA
Trigger: CGCTGCCACCTGGGCTGCCTCGAAATGTCCATGTGCTGAAGGTCAAGCGCAATGAGCTGGCTGCCTTGGCACGAGGGGCGCTGGTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000471285.1
ENST00000490650.1
ENST00000618387.1
ENST00000673956.1
CDS CCA 90 bp ACCGGCTCCTCCTCCGCAAATTCGTTCTCTTCGGGGCTCAGGCTGTaGCCGCCACTTCGGCCAAATCCTGGGGCCCTCACGGCAAGCACA +
Preference number: 5 (lower is better)
Translates to: TGSSSANSFSSGLRL*PPLRPNPGALTAST
Trigger: TGTGCTTGCCGTGAGGGCCCCAGGATTTGGCCGAAGTGGCGGCCACAGCCTGAGCCCCGAAGAGAACGAATTTGCGGAGGAGGAGCCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673702.1
ENST00000673956.1
CDS CCA 90 bp AGCGCGTTGTTGTACAGGTGCACCGTGTGCAACCGCTTGAGGCCCTaGAAGGCCAGTGGGTGGATGCCCTGCTCCCGCAGCTGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: SALLYRCTVCNRLRP*KASGWMPCSRSWLL
Trigger: CAGCAACCAGCTGCGGGAGCAGGGCATCCACCCACTGGCCTTCCAGGGCCTCAAGCGGTTGCACACGGTGCACCTGTACAACAACGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS TCA 90 bp GATCTCTGTGAGCTGATTCCCGGCGATGTCCAGCAGCTGCAGGGGTaGCCAAGGGAGTCAGGGACTCCCACCTGCAGATGGGCGAGGTCC +
Preference number: 5 (lower is better)
Translates to: DLCELIPGDVQQLQG*PRESGTPTCRWARS
Trigger: GGACCTCGCCCATCTGCAGGTGGGAGTCCCTGACTCCCTTGGTCACCCCTGCAGCTGCTGGACATCGCCGGGAATCAGCTCACAGAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471285.1
CDS-3UTR CAA 90 bp CCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATGAGCCGTTGAACATGTaGTCCGGCAGCCCGGCGTCT +
Preference number: 5 (lower is better)
Translates to: PGNGRTDGQGRRRAAMADEPLNM*SGSPAS
Trigger: AGACGCCGGGCTGCCGGACAACATGTTCAACGGCTC...ATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGAGCCGTTGAACATGTaGTCCGGCAGCCCGGCGTCT +
Preference number: 5 (lower is better)
Translates to: DGQMDRADGELLWLILAGEPLNM*SGSPAS
Trigger: AGACGCCGGGCTGCCGGACAACATGTTCAACGGCTC...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TGGCAGGGAGGGACTCTTAGCAGAGTGACTGCCCAGCACCTGGAGGAGCAGGGTGAGCCGTTGAACATGTaGTCCGGCAGCCCGGCGTCT +
Preference number: 5 (lower is better)
Translates to: WQGGTLSRVTAQHLEEQGEPLNM*SGSPAS
Trigger: AGACGCCGGGCTGCCGGACAACATGTTCAACGGCTC...ACCCTGCTCCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCCCTCCCTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TGGCAGGGAGGGACTCTTAGCAGAGTGACTGCCCAGCACCTGGAGGAGCAGGGTACCGTGTGCAACCGCTaGAGGCCCTGGAAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: WQGGTLSRVTAQHLEEQGTVCNR*RPWKAS
Trigger: ACTGGCCTTCCAGGGCCTCAAGCGGTTGCACACGGT...ACCCTGCTCCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCCCTCCCTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGCGCTCCAGCGCGTTGTaGTACAGGTGCACCGTGTGC +
Preference number: 5 (lower is better)
Translates to: DGQMDRADGELLWLILAGRSSAL*YRCTVC
Trigger: GCACACGGTGCACCTGTACAACAACGCGCTGGAGCG...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGCGCAGCAGGCGCAGCTaGCGGAAGGCGTCGCGGTGC +
Preference number: 5 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVRSRRS*RKASRC
Trigger: GCACCGCGACGCCTTCCGCAAGCTGCGCCTGCTGCG...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCAAGCGTGTGCAGCCGGTaGCCCGACAGGTCCAGCGAG +
Preference number: 5 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGASVCSR*PDRSSE
Trigger: CTCGCTGGACCTGTCGGGCAACCGGCTGCACACGCT...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGCGGCTGCGCAGTCGGTaGCTGGTGAGGTACAGCTCA +
Preference number: 5 (lower is better)
Translates to: DGQMDRADGELLWLILAGRLRSR*LVRYSS
Trigger: TGAGCTGTACCTCACCAGCAACCGACTGCGCAGCCG...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS TCA 90 bp GCCAGCTCTGGGCCAGGTCTGCATATGGGCTCTGGGGCACAGCAGTaGTCACAACAGGAGTGTGGGTCCTGCCTTCAGGGAGCCCACACA +
Preference number: 5 (lower is better)
Translates to: ASSGPGLHMGSGAQQ*SQQECGSCLQGAHT
Trigger: TGTGTGGGCTCCCTGAAGGCAGGACCCACACTCCTGTTGTGATCACTGCTGTGCCCCAGAGCCCATATGCAGACCTGGCCCAGAGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471210.1
CDS GCA 90 bp TCAAACGCCTTCTCTGGGAGCCCTCGGGAAGTCAGGCGGTTGTTTTaGAGGTTCAGCGTCTCCAGCCGGTGCAGCCGGGAGAGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SNAFSGSPREVRRLF*RFSVSSRCSRESSS
Trigger: TGAGGAGCTCTCCCGGCTGCACCGGCTGGAGACGCTGAACCTGCAAAACAACCGCCTGACTTCCCGAGGGCTCCCAGAGAAGGCGTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TGGCAGGGAGGGACTCTTAGCAGAGTGACTGCCCAGCACCTGGAGGAGCAGGGTTTCTTGAGGTGCAGCTaGTACAGGGCAGGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: WQGGTLSRVTAQHLEEQGFLRCS*YRAGGR
Trigger: CCTGCCGCCTGCCCTGTACAAGCTGCACCTCAAGAA...ACCCTGCTCCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCCCTCCCTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGACGCTCCAGCGCGTTGTaGTACAGGTGCACCGTGTGC +
Preference number: 5 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRRRSSAL*YRCTVC
Trigger: GCACACGGTGCACCTGTACAACAACGCGCTGGAGCG...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTACGCGCTCCAGCGCGTaGTTGTACAGGTGCACCGTG +
Preference number: 5 (lower is better)
Translates to: QGTDGQMDRADGELLWLITRSSA*LYRCTV
Trigger: CACGGTGCACCTGTACAACAACGCGCTGGAGCGCGT...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTAGCGTGTGCAGCCGGTaGCCCGACAGGTCCAGCGAG +
Preference number: 5 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCSVCSR*PDRSSE
Trigger: CTCGCTGGACCTGTCGGGCAACCGGCTGCACACGCT...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCGTGGAGTCGAAGGCATaGGCGGGCACCGCACTAATC +
Preference number: 5 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSVESKA*AGTALI
Trigger: GATTAGTGCGGTGCCCGCCAATGCCTTCGACTCCAC...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp CCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATGTGGAGTCGAAGGCATaGGCGGGCACCGCACTAATC +
Preference number: 5 (lower is better)
Translates to: PGNGRTDGQGRRRAAMADVESKA*AGTALI
Trigger: GATTAGTGCGGTGCCCGCCAATGCCTTCGACTCCAC...ATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TGGCAGGGAGGGACTCTTAGCAGAGTGACTGCCCAGCACCTGGAGGAGCAGGGTGTGGAGTCGAAGGCATaGGCGGGCACCGCACTAATC +
Preference number: 5 (lower is better)
Translates to: WQGGTLSRVTAQHLEEQGVESKA*AGTALI
Trigger: GATTAGTGCGGTGCCCGCCAATGCCTTCGACTCCAC...ACCCTGCTCCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCCCTCCCTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS CCA 90 bp TCAGCTGCGCTCCGCGGGCTCGGGCTCCTTCCATTCAAGTCAAGCTaGGCGCTCTCCGCGACGCAAGTTTTGTTGTGGGTTTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SAALRGLGLLPFKSS*ALSATQVLLWVFSS
Trigger: GGAGGAGAAAACCCACAACAAAACTTGCGTCGCGGAGAGCGCCCAGCTTGACTTGAATGGAAGGAGCCCGAGCCCGCGGAGCGCAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395871.7
CDS-3UTR CAA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCCGGGAAGTCAGGCGGTaGTTTTGCAGGTTCAGCGTC +
Preference number: 5 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSREVRR*FCRFSV
Trigger: GACGCTGAACCTGCAAAACAACCGCCTGACTTCCCG...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCTTCCAGAAGGTCTCGTaGTCCAGGCCCTCGTCAGTC +
Preference number: 5 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVFQKVS*SRPSSV
Trigger: GACTGACGAGGGCCTGGACAACGAGACCTTCTGGAA...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCAACCGTGTGCAACCGCTaGAGGCCCTGGAAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGATVCNR*RPWKAS
Trigger: ACTGGCCTTCCAGGGCCTCAAGCGGTTGCACACGGT...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGACCGTGTGCAACCGCTaGAGGCCCTGGAAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: VSARVMWDASCVQLGVSVTVCNR*RPWKAS
Trigger: ACTGGCCTTCCAGGGCCTCAAGCGGTTGCACACGGT...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCGCTCCAGCGCGTTGTaGTACAGGTGCACCGTGTGC +
Preference number: 5 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLRSSAL*YRCTVC
Trigger: GCACACGGTGCACCTGTACAACAACGCGCTGGAGCG...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGCGCTCCAGCGCGTTGTaGTACAGGTGCACCGTGTGC +
Preference number: 5 (lower is better)
Translates to: VSARVMWDASCVQLGVSVRSSAL*YRCTVC
Trigger: GCACACGGTGCACCTGTACAACAACGCGCTGGAGCG...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATCGCAGCAGGCGCAGCTaGCGGAAGGCGTCGCGGTGC +
Preference number: 5 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHRSRRS*RKASRC
Trigger: GCACCGCGACGCCTTCCGCAAGCTGCGCCTGCTGCG...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTAGCGTGTGCAGCCGGTaGCCCGACAGGTCCAGCGAG +
Preference number: 5 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLSVCSR*PDRSSE
Trigger: CTCGCTGGACCTGTCGGGCAACCGGCTGCACACGCT...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCACGGCTGCGCAGTCGGTaGCTGGTGAGGTACAGCTCA +
Preference number: 5 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGARLRSR*LVRYSS
Trigger: TGAGCTGTACCTCACCAGCAACCGACTGCGCAGCCG...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGCGGCTGCGCAGTCGGTaGCTGGTGAGGTACAGCTCA +
Preference number: 5 (lower is better)
Translates to: ETVSARVMWDASCVQLGVRLRSR*LVRYSS
Trigger: TGAGCTGTACCTCACCAGCAACCGACTGCGCAGCCG...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTGCCTCCACTGGGCTaGCCCATTGGAAAAGTGCCT +
Preference number: 5 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVLPPLG*PIGKVP
Trigger: AGGCACTTTTCCAATGGGCAAGCCCAGTGGAGGCAG...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCAGTCAGGCGGTTGTTTaGCAGGTTCAGCGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSSQAVV*QVQRLQ
Trigger: CTGGAGACGCTGAACCTGCAAAACAACCGCCTGACT...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCGGGAAGTCAGGCGGTaGTTTTGCAGGTTCAGCGTC +
Preference number: 5 (lower is better)
Translates to: QGTDGQMDRADGELLWLIREVRR*FCRFSV
Trigger: GACGCTGAACCTGCAAAACAACCGCCTGACTTCCCG...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGACCGGCGTCTGCCAGCTaGTTGTTGTGCAGGTACACA +
Preference number: 5 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRRPASAS*LLCRYT
Trigger: TGTGTACCTGCACAACAACAAGCTGGCAGACGCCGG...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGACCCGAGACAGGTTGTaGCTGGACAGATCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: DGQMDRADGELLWLILAGTRDRL*LDRSRY
Trigger: GTACCTGGATCTGTCCAGCAACAACCTGTCTCGGGT...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCACCCGAGACAGGTTGTaGCTGGACAGATCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVTRDRL*LDRSRY
Trigger: GTACCTGGATCTGTCCAGCAACAACCTGTCTCGGGT...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp ACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTACGCGCTCCAGCGCGTaGTTGTACAGGTGCACCGTG +
Preference number: 5 (lower is better)
Translates to: TVSARVMWDASCVQLGVSTRSSA*LYRCTV
Trigger: CACGGTGCACCTGTACAACAACGCGCTGGAGCGCGT...AGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCGCCAGCTCATTGCGCTaGACCTTCAGCACATGGACA +
Preference number: 5 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVASSLR*TFSTWT
Trigger: TGTCCATGTGCTGAAGGTCAAGCGCAATGAGCTGGC...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCAAGGCAGCCAGCTCATaGCGCTTGACCTTCAGCACA +
Preference number: 5 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSKAASS*RLTFST
Trigger: TGTGCTGAAGGTCAAGCGCAATGAGCTGGCTGCCTT...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTCGGCTGCGCAGTCGGTaGCTGGTGAGGTACAGCTCA +
Preference number: 5 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCRLRSR*LVRYSS
Trigger: TGAGCTGTACCTCACCAGCAACCGACTGCGCAGCCG...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGGTGGAGTCGAAGGCATaGGCGGGCACCGCACTAATC +
Preference number: 5 (lower is better)
Translates to: ETVSARVMWDASCVQLGVVESKA*AGTALI
Trigger: GATTAGTGCGGTGCCCGCCAATGCCTTCGACTCCAC...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGACTGAGAAAGATCCCCTaGAGGTTGGGCGTGGAGTCG +
Preference number: 5 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRRLRKIP*RLGVES
Trigger: CGACTCCACGCCCAACCTCAAGGGGATCTTTCTCAG...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCCACTGGGCTTGCCCATaGGAAAAGTGCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSHWACP*EKCLCP
Trigger: AGGACACAGGCACTTTTCCAATGGGCAAGCCCAGTG...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS GCA 90 bp ACTCCATTCCCTACCCATAGCTCCAGTCCTAGAATCCAGTCCACCTaGTGGGCACCTCCCTTGGAATTCTCCCCCATGGCAGCAGACCCC +
Preference number: 5 (lower is better)
Translates to: TPFPTHSSSPRIQST*WAPPLEFSPMAADP
Trigger: GGGGTCTGCTGCCATGGGGGAGAATTCCAAGGGAGGTGCCCAGCAGGTGGACTGGATTCTAGGACTGGAGCTATGGGTAGGGAATGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471210.1
CDS-3UTR CAA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGTGCAGAGATAGGTGGTaGGTGTGCTCAGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLCRDRW*VCSGRS
Trigger: GGACCTGCCTGAGCACACCAACCACCTATCTCTGCA...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGCGGGAAGTCAGGCGGTaGTTTTGCAGGTTCAGCGTC +
Preference number: 5 (lower is better)
Translates to: VSARVMWDASCVQLGVSVREVRR*FCRFSV
Trigger: GACGCTGAACCTGCAAAACAACCGCCTGACTTCCCG...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp CCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATGGTGCCAAGGTCAGCTaGTTATTGGCCAAGTACAGG +
Preference number: 5 (lower is better)
Translates to: PGNGRTDGQGRRRAAMADGAKVS*LLAKYR
Trigger: CCTGTACTTGGCCAATAACAAGCTGACCTTGGCACC...ATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCTCTGCCAGCTTGTTGTaGTGCAGGTACACAGACCTC +
Preference number: 5 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSSASLL*CRYTDL
Trigger: GAGGTCTGTGTACCTGCACAACAACAAGCTGGCAGA...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp CCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGCCAGCTTGTTGTaGTGCAGGTACACAGACCTC +
Preference number: 5 (lower is better)
Translates to: PGNGRTDGQGRRRAAMADSASLL*CRYTDL
Trigger: GAGGTCTGTGTACCTGCACAACAACAAGCTGGCAGA...ATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGCCGGCGTCTGCCAGCTaGTTGTTGTGCAGGTACACA +
Preference number: 5 (lower is better)
Translates to: ETVSARVMWDASCVQLGVPASAS*LLCRYT
Trigger: TGTGTACCTGCACAACAACAAGCTGGCAGACGCCGG...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCACCGGCGTCTGCCAGCTaGTTGTTGTGCAGGTACACA +
Preference number: 5 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGAPASAS*LLCRYT
Trigger: TGTGTACCTGCACAACAACAAGCTGGCAGACGCCGG...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAATGAGGACCTCGACGTaGCTGGAGCCGTTGAACATG +
Preference number: 5 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRRMRTST*LEPLNM
Trigger: CATGTTCAACGGCTCCAGCAACGTCGAGGTCCTCAT...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCTTCTTGAGGTGCAGCTaGTACAGGGCAGGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: LILAGARAVCGIGFGGLFFLRCS*YRAGGR
Trigger: CCTGCCGCCTGCCCTGTACAAGCTGCACCTCAAGAA...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCGGGATCTTCTCCAGCTaGTTGTTCTTGAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSGIFSS*LFLRCS
Trigger: GCTGCACCTCAAGAACAACAAGCTGGAGAAGATCCC...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCATTCCAGAAGGTCTCGTaGTCCAGGCCCTCGTCAGTC +
Preference number: 5 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGAFQKVS*SRPSSV
Trigger: GACTGACGAGGGCCTGGACAACGAGACCTTCTGGAA...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGTTCCAGAAGGTCTCGTaGTCCAGGCCCTCGTCAGTC +
Preference number: 5 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLFQKVS*SRPSSV
Trigger: GACTGACGAGGGCCTGGACAACGAGACCTTCTGGAA...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTTCCAGAAGGTCTCGTaGTCCAGGCCCTCGTCAGTC +
Preference number: 5 (lower is better)
Translates to: ETVSARVMWDASCVQLGVFQKVS*SRPSSV
Trigger: GACTGACGAGGGCCTGGACAACGAGACCTTCTGGAA...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGACCGTGTGCAACCGCTaGAGGCCCTGGAAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVTVCNR*RPWKAS
Trigger: ACTGGCCTTCCAGGGCCTCAAGCGGTTGCACACGGT...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTCGCTCCAGCGCGTTGTaGTACAGGTGCACCGTGTGC +
Preference number: 5 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLRSSAL*YRCTVC
Trigger: GCACACGGTGCACCTGTACAACAACGCGCTGGAGCG...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp TGGTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGACGCGCTCCAGCGCGTaGTTGTACAGGTGCACCGTG +
Preference number: 5 (lower is better)
Translates to: WCVCIRIHMSAGGGNGCLTRSSA*LYRCTV
Trigger: CACGGTGCACCTGTACAACAACGCGCTGGAGCGCGT...CAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTACGCGCTCCAGCGCGTaGTTGTACAGGTGCACCGTG +
Preference number: 5 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLTRSSA*LYRCTV
Trigger: CACGGTGCACCTGTACAACAACGCGCTGGAGCGCGT...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGATGCCTGTGATCTGGTaGTGCAGGATCATGAGGGTG +
Preference number: 5 (lower is better)
Translates to: DGQMDRADGELLWLILAGMPVIW*CRIMRV
Trigger: CACCCTCATGATCCTGCACAACCAGATCACAGGCAT...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp CCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATATGCCTGTGATCTGGTaGTGCAGGATCATGAGGGTG +
Preference number: 5 (lower is better)
Translates to: PGNGRTDGQGRRRAAMADMPVIW*CRIMRV
Trigger: CACCCTCATGATCCTGCACAACCAGATCACAGGCAT...ATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTAAGGCAGCCAGCTCATaGCGCTTGACCTTCAGCACA +
Preference number: 5 (lower is better)
Translates to: QGTDGQMDRADGELLWLIKAASS*RLTFST
Trigger: TGTGCTGAAGGTCAAGCGCAATGAGCTGGCTGCCTT...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTCGGCTGCGCAGTCGGTaGCTGGTGAGGTACAGCTCA +
Preference number: 5 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLRLRSR*LVRYSS
Trigger: TGAGCTGTACCTCACCAGCAACCGACTGCGCAGCCG...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGAAGATCCCCTTGAGGTaGGGCGTGGAGTCGAAGGCA +
Preference number: 5 (lower is better)
Translates to: ETVSARVMWDASCVQLGVKIPLR*GVESKA
Trigger: TGCCTTCGACTCCACGCCCAACCTCAAGGGGATCTT...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCTGAGAAAGATCCCCTaGAGGTTGGGCGTGGAGTCG +
Preference number: 5 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLLRKIP*RLGVES
Trigger: CGACTCCACGCCCAACCTCAAGGGGATCTTTCTCAG...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCTGAGAAAGATCCCCTaGAGGTTGGGCGTGGAGTCG +
Preference number: 5 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGLRKIP*RLGVES
Trigger: CGACTCCACGCCCAACCTCAAGGGGATCTTTCTCAG...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCAAGCGGCCACGGTCCTaGGAAATGTCACCAAACTCT +
Preference number: 5 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSKRPRS*EMSPNS
Trigger: AGAGTTTGGTGACATTTCCAAGGACCGTGGCCGCTT...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCAAGCGGCCACGGTCCTaGGAAATGTCACCAAACTCT +
Preference number: 5 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVKRPRS*EMSPNS
Trigger: AGAGTTTGGTGACATTTCCAAGGACCGTGGCCGCTT...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCAGAGACTGTGGTGGTTaGGAGGGTAGTTGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSRDCGG*EGSCVW
Trigger: CCACACACAACTACCCTCCAAACCACCACAGTCTCT...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS GCA 90 bp CACAGTCCTTCCATTTCCATCTGGTGCCTCTGTTTAAGAAGTCTCTaGCTCGCCACTGACTGTAAGCACAGGGCAGGGAACGCCGGGCCC +
Preference number: 5 (lower is better)
Translates to: HSPSISIWCLCLRSL*LATDCKHRAGNAGP
Trigger: GGGCCCGGCGTTCCCTGCCCTGTGCTTACAGTCAGTGGCGAGGCAGAGACTTCTTAAACAGAGGCACCAGATGGAAATGGAAGGACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471210.1
CDS-3UTR CAA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCTGCAGAGATAGGTGGTaGGTGTGCTCAGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: LILAGARAVCGIGFGGLFCRDRW*VCSGRS
Trigger: GGACCTGCCTGAGCACACCAACCACCTATCTCTGCA...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTTGCAGAGATAGGTGGTaGGTGTGCTCAGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCCRDRW*VCSGRS
Trigger: GGACCTGCCTGAGCACACCAACCACCTATCTCTGCA...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCAAGTCAGGCGGTTGTTTaGCAGGTTCAGCGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGASQAVV*QVQRLQ
Trigger: CTGGAGACGCTGAACCTGCAAAACAACCGCCTGACT...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp CAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTTCTGCCAGCTTGTTGTaGTGCAGGTACACAGACCTC +
Preference number: 5 (lower is better)
Translates to: QGTDGQMDRADGELLWLISASLL*CRYTDL
Trigger: GAGGTCTGTGTACCTGCACAACAACAAGCTGGCAGA...AATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTTTCTTGAGGTGCAGCTaGTACAGGGCAGGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLFLRCS*YRAGGR
Trigger: CCTGCCGCCTGCCCTGTACAAGCTGCACCTCAAGAA...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCTCCAGCTTGTTGTTCTaGAGGTGCAGCTTGTACAGG +
Preference number: 5 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVSSLLF*RCSLYR
Trigger: CCTGTACAAGCTGCACCTCAAGAACAACAAGCTGGA...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GAGACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGACCCGAGACAGGTTGTaGCTGGACAGATCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: ETVSARVMWDASCVQLGVTRDRL*LDRSRY
Trigger: GTACCTGGATCTGTCCAGCAACAACCTGTCTCGGGT...CACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCAACCCGAGACAGGTTGTaGCTGGACAGATCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGATRDRL*LDRSRY
Trigger: GTACCTGGATCTGTCCAGCAACAACCTGTCTCGGGT...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGGCCAGCTCATTGCGCTaGACCTTCAGCACATGGACA +
Preference number: 5 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLASSLR*TFSTWT
Trigger: TGTCCATGTGCTGAAGGTCAAGCGCAATGAGCTGGC...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGGTGGAGTCGAAGGCATaGGCGGGCACCGCACTAATC +
Preference number: 5 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVVESKA*AGTALI
Trigger: GATTAGTGCGGTGCCCGCCAATGCCTTCGACTCCAC...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTAAGATCCCCTTGAGGTaGGGCGTGGAGTCGAAGGCA +
Preference number: 5 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCKIPLR*GVESKA
Trigger: TGCCTTCGACTCCACGCCCAACCTCAAGGGGATCTT...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTCTGAGAAAGATCCCCTaGAGGTTGGGCGTGGAGTCG +
Preference number: 5 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCLRKIP*RLGVES
Trigger: CGACTCCACGCCCAACCTCAAGGGGATCTTTCTCAG...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp TGGCAGGGAGGGACTCTTAGCAGAGTGACTGCCCAGCACCTGGAGGAGCAGGGTGAGCCCACAGCCAGCTaGTTAAACCTGAGAAAGATC +
Preference number: 5 (lower is better)
Translates to: WQGGTLSRVTAQHLEEQGEPTAS*LNLRKI
Trigger: GATCTTTCTCAGGTTTAACAAGCTGGCTGTGGGCTC...ACCCTGCTCCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCCCTCCCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCCTGTTCGCACATGACTaGTGCATGTGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSLFAHD*CMCVCV
Trigger: CACACACACACACATGCACAAGTCATGTGCGAACAG...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp ACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTCTGCCTCCACTGGGCTaGCCCATTGGAAAAGTGCCT +
Preference number: 5 (lower is better)
Translates to: TVSARVMWDASCVQLGVSLPPLG*PIGKVP
Trigger: AGGCACTTTTCCAATGGGCAAGCCCAGTGGAGGCAG...AGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS TCA 90 bp CGGAACCGAAGATCCTGTGACAAGGTTCTGGAAGCTCAGCTTCTCTaGAGCCTCTCTCCTGCGCATCCCCCAGGTCTTAGAAACACCCGC +
Preference number: 5 (lower is better)
Translates to: RNRRSCDKVLEAQLL*SLSPAHPPGLRNTR
Trigger: GCGGGTGTTTCTAAGACCTGGGGGATGCGCAGGAGAGAGGCTTCAGAGAAGCTGAGCTTCCAGAACCTTGTCACAGGATCTTCGGTTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471210.1
CDS GCA 90 bp GACGTTGCTGGAGCCGTTGAACATGTTGTCCGGCAGCCCGGCGTCTaGCAGCTTGTTGTTGTGCAGGTACACAGACCTCAAGTTTGGCTT +
Preference number: 5 (lower is better)
Translates to: DVAGAVEHVVRQPGV*QLVVVQVHRPQVWL
Trigger: AAGCCAAACTTGAGGTCTGTGTACCTGCACAACAACAAGCTGGCAGACGCCGGGCTGCCGGACAACATGTTCAACGGCTCCAGCAACGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS CCA 90 bp TGGGTTCTAAAGGCCCTCGGAACCGAAGATCCTGTGACAAGGTTCTaGAAGCTCAGCTTCTCTGAAGCCTCTCTCCTGCGCATCCCCCAG +
Preference number: 5 (lower is better)
Translates to: WVLKALGTEDPVTRF*KLSFSEASLLRIPQ
Trigger: CTGGGGGATGCGCAGGAGAGAGGCTTCAGAGAAGCTGAGCTTCCAGAACCTTGTCACAGGATCTTCGGTTCCGAGGGCCTTTAGAACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471210.1
CDS-3UTR CAA 90 bp GTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGCAGAGATAGGTGGTaGGTGTGCTCAGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: VCMHTHTHVSRGREWVPVCRDRW*VCSGRS
Trigger: GGACCTGCCTGAGCACACCAACCACCTATCTCTGCA...CACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGCGTCTGCCAGCTTGTaGTTGTGCAGGTACACAGAC +
Preference number: 5 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMASASL*LCRYTD
Trigger: GTCTGTGTACCTGCACAACAACAAGCTGGCAGACGC...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TGGTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGCCGGCGTCTGCCAGCTaGTTGTTGTGCAGGTACACA +
Preference number: 5 (lower is better)
Translates to: WCVCIRIHMSAGGGNGCLPASAS*LLCRYT
Trigger: TGTGTACCTGCACAACAACAAGCTGGCAGACGCCGG...CAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TGGCAGGGAGGGACTCTTAGCAGAGTGACTGCCCAGCACCTGGAGGAGCAGGGTATCTTCTCCAGCTTGTaGTTCTTGAGGTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: WQGGTLSRVTAQHLEEQGIFSSL*FLRCSL
Trigger: CAAGCTGCACCTCAAGAACAACAAGCTGGAGAAGAT...ACCCTGCTCCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCCCTCCCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGGGGATCTTCTCCAGCTaGTTGTTCTTGAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLGIFSS*LFLRCS
Trigger: GCTGCACCTCAAGAACAACAAGCTGGAGAAGATCCC...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TGGTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTTCCAGAAGGTCTCGTaGTCCAGGCCCTCGTCAGTC +
Preference number: 5 (lower is better)
Translates to: WCVCIRIHMSAGGGNGCLFQKVS*SRPSSV
Trigger: GACTGACGAGGGCCTGGACAACGAGACCTTCTGGAA...CAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TTGGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCACCGTGTGCAACCGCTaGAGGCCCTGGAAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: LEGCSHMTCACVCVWCVCTVCNR*RPWKAS
Trigger: ACTGGCCTTCCAGGGCCTCAAGCGGTTGCACACGGT...GCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCGCTCCAGCGCGTaGTTGTACAGGTGCACCGTG +
Preference number: 5 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHTRSSA*LYRCTV
Trigger: CACGGTGCACCTGTACAACAACGCGCTGGAGCGCGT...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGCCAGCTCATTGCGCTaGACCTTCAGCACATGGACA +
Preference number: 5 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCASSLR*TFSTWT
Trigger: TGTCCATGTGCTGAAGGTCAAGCGCAATGAGCTGGC...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTAAGGCAGCCAGCTCATaGCGCTTGACCTTCAGCACA +
Preference number: 5 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCKAASS*RLTFST
Trigger: TGTGCTGAAGGTCAAGCGCAATGAGCTGGCTGCCTT...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCAGGCACCGCACTAATCTaGTTGTTCTGCAGGTACAGG +
Preference number: 5 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGAGTALI*LFCRYR
Trigger: CCTGTACCTGCAGAACAACAAGATTAGTGCGGTGCC...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTGGCACCGCACTAATCTaGTTGTTCTGCAGGTACAGG +
Preference number: 5 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGGTALI*LFCRYR
Trigger: CCTGTACCTGCAGAACAACAAGATTAGTGCGGTGCC...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GCCAGGCCAGCAGTCCTGAAGGCTCCTGTCCCCATAGGATGGGAAAGGAATAAAAAGATCCCCTTGAGGTaGGGCGTGGAGTCGAAGGCA +
Preference number: 5 (lower is better)
Translates to: ARPAVLKAPVPIGWERNKKIPLR*GVESKA
Trigger: TGCCTTCGACTCCACGCCCAACCTCAAGGGGATCTT...TTTATTCCTTTCCCATCCTATGGGGACAGGAGCCTTCAGGACTGCTGGCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTAAGATCCCCTTGAGGTaGGGCGTGGAGTCGAAGGCA +
Preference number: 5 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLKIPLR*GVESKA
Trigger: TGCCTTCGACTCCACGCCCAACCTCAAGGGGATCTT...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTAAGATCCCCTTGAGGTaGGGCGTGGAGTCGAAGGCA +
Preference number: 5 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGKIPLR*GVESKA
Trigger: TGCCTTCGACTCCACGCCCAACCTCAAGGGGATCTT...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGGCAAGAGCCACCTTGTCACTATCTaGTTTCCTCTTCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: DGQGRRRAAMADSGWGKSHLVTI*FPLPPP
Trigger: AGGAGGAGGAAGAGGAAACAAGATAGTGACAAGGTG...GCTCTTGCCCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TGGCAGGGAGGGACTCTTAGCAGAGTGACTGCCCAGCACCTGGAGGAGCAGGGTCACCTTGTCACTATCTaGTTTCCTCTTCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: WQGGTLSRVTAQHLEEQGHLVTI*FPLPPP
Trigger: AGGAGGAGGAAGAGGAAACAAGATAGTGACAAGGTG...ACCCTGCTCCTCCAGGTGCTGGGCAGTCACTCTGCTAAGAGTCCCTCCCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GGGCTCACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCACCTTGTCACTATCTaGTTTCCTCTTCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: GLTAHRRVLQKRVRRSIVHLVTI*FPLPPP
Trigger: AGGAGGAGGAAGAGGAAACAAGATAGTGACAAGGTG...GACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGTGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGAGAGACTGTGGTGGTTaGGAGGGTAGTTGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: VSARVMWDASCVQLGVSVRDCGG*EGSCVW
Trigger: CCACACACAACTACCCTCCAAACCACCACAGTCTCT...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCCACTGGGCTTGCCCATaGGAAAAGTGCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: LILAGARAVCGIGFGGLFHWACP*EKCLCP
Trigger: AGGACACAGGCACTTTTCCAATGGGCAAGCCCAGTG...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTCTGCCTCCACTGGGCTaGCCCATTGGAAAAGTGCCT +
Preference number: 5 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLLPPLG*PIGKVP
Trigger: AGGCACTTTTCCAATGGGCAAGCCCAGTGGAGGCAG...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGCTGCCTCCACTGGGCTaGCCCATTGGAAAAGTGCCT +
Preference number: 5 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVLPPLG*PIGKVP
Trigger: AGGCACTTTTCCAATGGGCAAGCCCAGTGGAGGCAG...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS TCA 90 bp AGCGGGGTGCCAAGGTCAGCTTGTTATTGGCCAAGTACAGGTAATTaGGGTTGGTCAGATGCTCAAACGCCTTCTCTGGGAGCCCTCGGG +
Preference number: 5 (lower is better)
Translates to: SGVPRSACYWPSTGN*GWSDAQTPSLGALG
Trigger: CCCGAGGGCTCCCAGAGAAGGCGTTTGAGCATCTGACCAACCTCAATTACCTGTACTTGGCCAATAACAAGCTGACCTTGGCACCCCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS GCA 90 bp TCCCCAAGCGGCCACGGTCCTTGGAAATGTCACCAAACTCTAAGTTaGCTTCAATGTCCAAGACCTGCAGGTGCTTCAGCCTCCGGAAGG +
Preference number: 5 (lower is better)
Translates to: SPSGHGPWKCHQTLS*LQCPRPAGASASGR
Trigger: CCTTCCGGAGGCTGAAGCACCTGCAGGTCTTGGACATTGAAGGCAACTTAGAGTTTGGTGACATTTCCAAGGACCGTGGCCGCTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000490650.1
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGAGTCAGGCGGTTGTTTaGCAGGTTCAGCGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: VCMHTHTHVSRGREWVPVSQAVV*QVQRLQ
Trigger: CTGGAGACGCTGAACCTGCAAAACAACCGCCTGACT...CACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGAGTCAGGCGGTTGTTTaGCAGGTTCAGCGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVSQAVV*QVQRLQ
Trigger: CTGGAGACGCTGAACCTGCAAAACAACCGCCTGACT...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp CTGGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGAGGTGCCAAGGTCAGCTaGTTATTGGCCAAGTACAGG +
Preference number: 5 (lower is better)
Translates to: LATEHGYPCVFSRERTDRGAKVS*LLAKYR
Trigger: CCTGTACTTGGCCAATAACAAGCTGACCTTGGCACC...TCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp ACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTTCTGCCAGCTTGTTGTaGTGCAGGTACACAGACCTC +
Preference number: 5 (lower is better)
Translates to: TVSARVMWDASCVQLGVSSASLL*CRYTDL
Trigger: GAGGTCTGTGTACCTGCACAACAACAAGCTGGCAGA...AGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGGCGTCTGCCAGCTTGTaGTTGTGCAGGTACACAGAC +
Preference number: 5 (lower is better)
Translates to: VCMHTHTHVSRGREWVPVASASL*LCRYTD
Trigger: GTCTGTGTACCTGCACAACAACAAGCTGGCAGACGC...CACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TGGTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGGCGTCTGCCAGCTTGTaGTTGTGCAGGTACACAGAC +
Preference number: 5 (lower is better)
Translates to: WCVCIRIHMSAGGGNGCLASASL*LCRYTD
Trigger: GTCTGTGTACCTGCACAACAACAAGCTGGCAGACGC...CAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGGCGTCTGCCAGCTTGTaGTTGTGCAGGTACACAGAC +
Preference number: 5 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVASASL*LCRYTD
Trigger: GTCTGTGTACCTGCACAACAACAAGCTGGCAGACGC...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGATGAGGACCTCGACGTaGCTGGAGCCGTTGAACATG +
Preference number: 5 (lower is better)
Translates to: VCMHTHTHVSRGREWVPVMRTST*LEPLNM
Trigger: CATGTTCAACGGCTCCAGCAACGTCGAGGTCCTCAT...CACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TTGGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCTTCTTGAGGTGCAGCTaGTACAGGGCAGGCGGCAGG +
Preference number: 5 (lower is better)
Translates to: LEGCSHMTCACVCVWCVCFLRCS*YRAGGR
Trigger: CCTGCCGCCTGCCCTGTACAAGCTGCACCTCAAGAA...GCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp ACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGGGCAGACGGCGAATCTTCTCCAGCTTGTaGTTCTTGAGGTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: TLVSSPGNGRTDGQGRRRIFSSL*FLRCSL
Trigger: CAAGCTGCACCTCAAGAACAACAAGCTGGAGAAGAT...TCGCCGTCTGCCCTGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCATGCCTGTGATCTGGTaGTGCAGGATCATGAGGGTG +
Preference number: 5 (lower is better)
Translates to: LILAGARAVCGIGFGGLFMPVIW*CRIMRV
Trigger: CACCCTCATGATCCTGCACAACCAGATCACAGGCAT...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp ACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTATGCCTGTGATCTGGTaGTGCAGGATCATGAGGGTG +
Preference number: 5 (lower is better)
Translates to: TVSARVMWDASCVQLGVSMPVIW*CRIMRV
Trigger: CACCCTCATGATCCTGCACAACCAGATCACAGGCAT...AGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp CACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCATACACATGAGCGTGTGCAGCCGGTaGCCCGACAGGTCCAGCGAG +
Preference number: 5 (lower is better)
Translates to: HMTCACVCVWCVCIRIHMSVCSR*PDRSSE
Trigger: CTCGCTGGACCTGTCGGGCAACCGGCTGCACACGCT...CATGTGTATGCGTATGCATACACACCACACACACACACATGCACAAGTCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTAAGGCAGCCAGCTCATaGCGCTTGACCTTCAGCACA +
Preference number: 5 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLKAASS*RLTFST
Trigger: TGTGCTGAAGGTCAAGCGCAATGAGCTGGCTGCCTT...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCAGAGCCCACAGCCAGCTaGTTAAACCTGAGAAAGATC +
Preference number: 5 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGAEPTAS*LNLRKI
Trigger: GATCTTTCTCAGGTTTAACAAGCTGGCTGTGGGCTC...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTGAGCCCACAGCCAGCTaGTTAAACCTGAGAAAGATC +
Preference number: 5 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGEPTAS*LNLRKI
Trigger: GATCTTTCTCAGGTTTAACAAGCTGGCTGTGGGCTC...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTGGAGCCCACAGCCAGCTaGTTAAACCTGAGAAAGATC +
Preference number: 5 (lower is better)
Translates to: VSARVMWDASCVQLGVSVEPTAS*LNLRKI
Trigger: GATCTTTCTCAGGTTTAACAAGCTGGCTGTGGGCTC...CACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCAAGCGGCCACGGTCCTaGGAAATGTCACCAAACTCT +
Preference number: 5 (lower is better)
Translates to: LILAGARAVCGIGFGGLFKRPRS*EMSPNS
Trigger: AGAGTTTGGTGACATTTCCAAGGACCGTGGCCGCTT...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GACGGACAGATGGACAGGGCAGACGGCGAGCTGCTATGGCTGATTCTGGCTGGGCACATCTGCATCACCTaGTCACTATCTTGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: DGQMDRADGELLWLILAGHICIT*SLSCFL
Trigger: GAGGAAACAAGATAGTGACAAGGTGATGCAGATGTG...CCCAGCCAGAATCAGCCATAGCAGCTCGCCGTCTGCCCTGTCCATCTGTCCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGAGAGACTGTGGTGGTTaGGAGGGTAGTTGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMRDCGG*EGSCVW
Trigger: CCACACACAACTACCCTCCAAACCACCACAGTCTCT...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTAGAGACTGTGGTGGTTaGGAGGGTAGTTGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCRDCGG*EGSCVW
Trigger: CCACACACAACTACCCTCCAAACCACCACAGTCTCT...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp TGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGTAGAGCATGGATACCCTaGTGTCTTCTCCAGGGAACG +
Preference number: 5 (lower is better)
Translates to: CVSPCHVGCLMCAAGCVCRAWIP*CLLQGT
Trigger: CGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCT...ACAGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGAGAGCATGGATACCCTaGTGTCTTCTCCAGGGAACG +
Preference number: 5 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMRAWIP*CLLQGT
Trigger: CGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCT...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TGGTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGCACTGGGCTTGCCCATaGGAAAAGTGCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: WCVCIRIHMSAGGGNGCLHWACP*EKCLCP
Trigger: AGGACACAGGCACTTTTCCAATGGGCAAGCCCAGTG...CAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTATCTTTTCCAGCTGGTaGTTCTGCAGAGATAGGTGG +
Preference number: 5 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGIFSSW*FCRDRW
Trigger: CCACCTATCTCTGCAGAACAACCAGCTGGAAAAGAT...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGGTGCCAAGGTCAGCTaGTTATTGGCCAAGTACAGG +
Preference number: 5 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGGAKVS*LLAKYR
Trigger: CCTGTACTTGGCCAATAACAAGCTGACCTTGGCACC...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TGGTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGGGTGCCAAGGTCAGCTaGTTATTGGCCAAGTACAGG +
Preference number: 5 (lower is better)
Translates to: WCVCIRIHMSAGGGNGCLGAKVS*LLAKYR
Trigger: CCTGTACTTGGCCAATAACAAGCTGACCTTGGCACC...CAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCTCCAGCTTGTTGTTCTaGAGGTGCAGCTTGTACAGG +
Preference number: 5 (lower is better)
Translates to: LILAGARAVCGIGFGGLFSSLLF*RCSLYR
Trigger: CCTGTACAAGCTGCACCTCAAGAACAACAAGCTGGA...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGGGATCTTCTCCAGCTaGTTGTTCTTGAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGGIFSS*LFLRCS
Trigger: GCTGCACCTCAAGAACAACAAGCTGGAGAAGATCCC...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp ACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACAGCCAGCTCATTGCGCTaGACCTTCAGCACATGGACA +
Preference number: 5 (lower is better)
Translates to: TEHGYPCVFSRERTDRWTASSLR*TFSTWT
Trigger: TGTCCATGTGCTGAAGGTCAAGCGCAATGAGCTGGC...TGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGTGTGGGCACCGCACTAATCTaGTTGTTCTGCAGGTACAGG +
Preference number: 5 (lower is better)
Translates to: VCIRIHMSAGGGNGCLCVGTALI*LFCRYR
Trigger: CCTGTACCTGCAGAACAACAAGATTAGTGCGGTGCC...CACACACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GTGTGTATGCATACGCATACACATGTCAGCAGGGGGAGGGAATGGGTGCCTGTGGGCACCGCACTAATCTaGTTGTTCTGCAGGTACAGG +
Preference number: 5 (lower is better)
Translates to: VCMHTHTHVSRGREWVPVGTALI*LFCRYR
Trigger: CCTGTACCTGCAGAACAACAAGATTAGTGCGGTGCC...CACAGGCACCCATTCCCTCCCCCTGCTGACATGTGTATGCGTATGCATACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATCTGAGAAAGATCCCCTaGAGGTTGGGCGTGGAGTCG +
Preference number: 5 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHLRKIP*RLGVES
Trigger: CGACTCCACGCCCAACCTCAAGGGGATCTTTCTCAG...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTAAGCGGCCACGGTCCTaGGAAATGTCACCAAACTCT +
Preference number: 5 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLKRPRS*EMSPNS
Trigger: AGAGTTTGGTGACATTTCCAAGGACCGTGGCCGCTT...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp CAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCACCTTGTCACTATCTaGTTTCCTCTTCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: QACAAEKSPAVHRPRSHLHLVTI*FPLPPP
Trigger: AGGAGGAGGAAGAGGAAACAAGATAGTGACAAGGTG...CAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGAGAGACTGTGGTGGTTaGGAGGGTAGTTGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVRDCGG*EGSCVW
Trigger: CCACACACAACTACCCTCCAAACCACCACAGTCTCT...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTAGAGCATGGATACCCTaGTGTCTTCTCCAGGGAACG +
Preference number: 5 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGRAWIP*CLLQGT
Trigger: CGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCT...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp ACTGTGTCAGCCCGTGTCATGTGGGATGCCTCATGTGTGCAGCTGGGTGTGTCTGGGATCTTCTCCAGCTaGTTGTTCTGCAGAGATAGG +
Preference number: 5 (lower is better)
Translates to: TVSARVMWDASCVQLGVSGIFSS*LFCRDR
Trigger: CCTATCTCTGCAGAACAACAAGCTGGAGAAGATCCC...AGACACACCCAGCTGCACACATGAGGCATCCCACATGACACGGGCTGACACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673956.1
CDS CCA 90 bp CTTGGTGAGATAGTTGGCAGCAAAGTCCACACTGATCAGGGCGTTTaGCAGGAAGCGGGGTGCCAAGGTCAGCTTGTTATTGGCCAAGTA +
Preference number: 5 (lower is better)
Translates to: LGEIVGSKVHTDQGV*QEAGCQGQLVIGQV
Trigger: TACTTGGCCAATAACAAGCTGACCTTGGCACCCCGCTTCCTGCCAAACGCCCTGATCAGTGTGGACTTTGCTGCCAACTATCTCACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp CTGATTCTGGCTGGGGCAAGAGCTGTCTGTGGCATAGGCTTTGGAGGGCTGTTCATCTTCTCCAGCTTGTaGTTCTTGAGGTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: LILAGARAVCGIGFGGLFIFSSL*FLRCSL
Trigger: CAAGCTGCACCTCAAGAACAACAAGCTGGAGAAGAT...GAACAGCCCTCCAAAGCCTATGCCACAGACAGCTCTTGCCCCAGCCAGAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCATCACCAAACTCTAAGTaGCCTTCAATGTCCAAGACC +
Preference number: 5 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGASPNSK*PSMSKT
Trigger: GGTCTTGGACATTGAAGGCAACTTAGAGTTTGGTGA...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GGCACCCGGAACTTCCCCCACAGGCCTGAAGAACAAAGGTGTCTCCTAGGTGCACACATCTGCATCACCTaGTCACTATCTTGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: GTRNFPHRPEEQRCLLGAHICIT*SLSCFL
Trigger: GAGGAAACAAGATAGTGACAAGGTGATGCAGATGTG...TGCACCTAGGAGACACCTTTGTTCTTCAGGCCTGTGGGGGAAGTTCCGGGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp ACAGCACACAGGCGTGTGCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTaGTCACTATCTTGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: TAHRRVLQKRVRRSIVLGHICIT*SLSCFL
Trigger: GAGGAAACAAGATAGTGACAAGGTGATGCAGATGTG...ACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGCACACGCCTGTGTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTCTGTTCGCACATGACTaGTGCATGTGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGLFAHD*CMCVCV
Trigger: CACACACACACACATGCACAAGTCATGTGCGAACAG...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATCACTGGGCTTGCCCATaGGAAAAGTGCCTGTGTCCT +
Preference number: 5 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHHWACP*EKCLCP
Trigger: AGGACACAGGCACTTTTCCAATGGGCAAGCCCAGTG...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp CACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCATACACATGGATCAGCCGGCCTCCTaGCTCACCATGAGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: HMTCACVCVWCVCIRIHMDQPAS*LTMSPP
Trigger: AGGAGGGCTCATGGTGAGCAAGGAGGCCGGCTGATC...CATGTGTATGCGTATGCATACACACCACACACACACACATGCACAAGTCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371500.8
CDS-3UTR CAA 90 bp ACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACATCCAGCTTGTTGTTCTaGAGGTGCAGCTTGTACAGG +
Preference number: 5 (lower is better)
Translates to: TEHGYPCVFSRERTDRWTSSLLF*RCSLYR
Trigger: CCTGTACAAGCTGCACCTCAAGAACAACAAGCTGGA...TGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTATCTTCTCCAGCTTGTaGTTCTTGAGGTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGIFSSL*FLRCSL
Trigger: CAAGCTGCACCTCAAGAACAACAAGCTGGAGAAGAT...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATGGGATCTTCTCCAGCTaGTTGTTCTTGAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHGIFSS*LFLRCS
Trigger: GCTGCACCTCAAGAACAACAAGCTGGAGAAGATCCC...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATGGCACCGCACTAATCTaGTTGTTCTGCAGGTACAGG +
Preference number: 5 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHGTALI*LFCRYR
Trigger: CCTGTACCTGCAGAACAACAAGATTAGTGCGGTGCC...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GGCCACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGTCACCAAACTCTAAGTaGCCTTCAATGTCCAAGACC +
Preference number: 5 (lower is better)
Translates to: GHRAWIPLCLLQGTDGQMSPNSK*PSMSKT
Trigger: GGTCTTGGACATTGAAGGCAACTTAGAGTTTGGTGA...CATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TTGGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCAAGCGGCCACGGTCCTaGGAAATGTCACCAAACTCT +
Preference number: 5 (lower is better)
Translates to: LEGCSHMTCACVCVWCVCKRPRS*EMSPNS
Trigger: AGAGTTTGGTGACATTTCCAAGGACCGTGGCCGCTT...GCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTCACCTTGTCACTATCTaGTTTCCTCTTCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLHLVTI*FPLPPP
Trigger: AGGAGGAGGAAGAGGAAACAAGATAGTGACAAGGTG...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATTCCGCGACGCAAGTTTaGTTGTGGGTTTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GGLFAHDLCMCVCVVCMHSATQV*LWVFSS
Trigger: GGAGGAGAAAACCCACAACAAAACTTGCGTCGCGGA...ATGCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395871.7
CDS-3UTR CAA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGATCTTCTCCAGCTTGTaGTTCTGCAGAGATAGGTGG +
Preference number: 5 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVIFSSL*FCRDRW
Trigger: CCACCTATCTCTGCAGAACAACAAGCTGGAGAAGAT...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673956.1
CDS-3UTR CAA 90 bp TTGGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCTCCAGCTTGTTGTTCTaGAGGTGCAGCTTGTACAGG +
Preference number: 5 (lower is better)
Translates to: LEGCSHMTCACVCVWCVCSSLLF*RCSLYR
Trigger: CCTGTACAAGCTGCACCTCAAGAACAACAAGCTGGA...GCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp GCTGCAGAAAAGAGTCCGGCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTTCACCAAACTCTAAGTaGCCTTCAATGTCCAAGACC +
Preference number: 5 (lower is better)
Translates to: AAEKSPAVHRPRSHLHHLSPNSK*PSMSKT
Trigger: GGTCTTGGACATTGAAGGCAACTTAGAGTTTGGTGA...AAGGTGATGCAGATGTGACCTAGGACGATGGACCGCCGGACTCTTTTCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp GACTGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTCACATCTGCATCACCTaGTCACTATCTTGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: DCGGLEGSCVWLSWVFEGHICIT*SLSCFL
Trigger: GAGGAAACAAGATAGTGACAAGGTGATGCAGATGTG...ACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp TGTGGTGGTTTGGAGGGTAGTTGTGTGTGGCTGAGCTGGGTGTTTGAGGGTGTGCACATCTGCATCACCTaGTCACTATCTTGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: CGGLEGSCVWLSWVFEGVHICIT*SLSCFL
Trigger: GAGGAAACAAGATAGTGACAAGGTGATGCAGATGTG...CACACCCTCAAACACCCAGCTCAGCCACACACAACTACCCTCCAAACCACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS-3UTR CAA 90 bp TTGGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCCTGTTCGCACATGACTaGTGCATGTGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: LEGCSHMTCACVCVWCVCLFAHD*CMCVCV
Trigger: CACACACACACACATGCACAAGTCATGTGCGAACAG...GCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp ACAGAGCATGGATACCCTTGTGTCTTCTCCAGGGAACGGACGGACAGATGGACATCACCAAACTCTAAGTaGCCTTCAATGTCCAAGACC +
Preference number: 5 (lower is better)
Translates to: TEHGYPCVFSRERTDRWTSPNSK*PSMSKT
Trigger: GGTCTTGGACATTGAAGGCAACTTAGAGTTTGGTGA...TGTCCATCTGTCCGTCCGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp TTGGAGGGCTGTTCGCACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCTCACCAAACTCTAAGTaGCCTTCAATGTCCAAGACC +
Preference number: 5 (lower is better)
Translates to: LEGCSHMTCACVCVWCVCSPNSK*PSMSKT
Trigger: GGTCTTGGACATTGAAGGCAACTTAGAGTTTGGTGA...GCATACACACCACACACACACACATGCACAAGTCATGTGCGAACAGCCCTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS-3UTR CAA 90 bp CACATGACTTGTGCATGTGTGTGTGTGTGGTGTGTATGCATACGCATACACATGAGAGCATGGATACCCTaGTGTCTTCTCCAGGGAACG +
Preference number: 5 (lower is better)
Translates to: HMTCACVCVWCVCIRIHMRAWIP*CLLQGT
Trigger: CGTTCCCTGGAGAAGACACAAGGGTATCCATGCTCT...CATGTGTATGCGTATGCATACACACCACACACACACACATGCACAAGTCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS CCA 72 bp CATGGTGCCTGCAGGGGGTGCCGAGTCAGATGCGCCTaGGCGCCAGGGCTGACGGAACCTGCTGCGCCCCGG +
Preference number: 6 (lower is better)
Translates to: HGACRGCRVRCA*APGLTEPAAPR
Trigger: CCGGGGCGCAGCAGGTTCCGTCAGCCCTGGCGCCCAGGCGCATCTGACTCGGCACCCCCTGCAGGCACCATG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312553.10
ENST00000395871.7
ENST00000673956.1
CDS GCA 72 bp CTGGGCCATGGTGCCTGCAGGGGGTGCCGAGTCAGATaGGCCTGGGCGCCAGGGCTGACGGAACCTGCTGCG +
Preference number: 6 (lower is better)
Translates to: LGHGACRGCRVR*AWAPGLTEPAA
Trigger: CGCAGCAGGTTCCGTCAGCCCTGGCGCCCAGGCGCATCTGACTCGGCACCCCCTGCAGGCACCATGGCCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312553.10
ENST00000395871.7
ENST00000673956.1
CDS GCA 72 bp CAGGAGCAGCAGCACCCGGCTCTGGGCCATGGTGCCTaGAGGGGGTGCCGAGTCAGATGCGCCTGGGCGCCA +
Preference number: 6 (lower is better)
Translates to: QEQQHPALGHGA*RGCRVRCAWAP
Trigger: TGGCGCCCAGGCGCATCTGACTCGGCACCCCCTGCAGGCACCATGGCCCAGAGCCGGGTGCTGCTGCTCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673702.1
ENST00000673956.1
CDS GCA 72 bp CTGGGCCATGGTGCCTGCAGGGGGTGCCGAGTCAGATaGGCCTGGGCGCCAGGGCTGACGGAACCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: LGHGACRGCRVR*AWAPGLTEPGR
Trigger: CCTGCCTGGTTCCGTCAGCCCTGGCGCCCAGGCGCATCTGACTCGGCACCCCCTGCAGGCACCATGGCCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371500.8
ENST00000618387.1
ENST00000673702.1
CDS GCA 72 bp CGCCCCACAGGCCGAACGCGCTCCCCCAGTCTCAGCTaGGCTCCGCGGGCTCGGGCTCCTTCCATTCAAGTC +
Preference number: 6 (lower is better)
Translates to: RPTGRTRSPSLS*APRARAPSIQV
Trigger: GACTTGAATGGAAGGAGCCCGAGCCCGCGGAGCGCAGCTGAGACTGGGGGAGCGCGTTCGGCCTGTGGGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673702.1
ENST00000673956.1
CDS CAA 90 bp GTGCGCACGCGGCGAGGCAGGCCACTGGGCACGCGCTCCAGCGCGTaGTTGTACAGGTGCACCGTGTGCAACCGCTTGAGGCCCTGGAAG +
Preference number: 6 (lower is better)
Translates to: VRTRRGRPLGTRSSA*LYRCTVCNRLRPWK
Trigger: CTTCCAGGGCCTCAAGCGGTTGCACACGGTGCACCTGTACAACAACGCGCTGGAGCGCGTGCCCAGTGGCCTGCCTCGCCGCGTGCGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS CCA 72 bp GGGGCTCAGGCTGTGGCCGCCACTTCGGCCAAATCCTaGGGCCCTCACGGCAAGCACAGGTCCCAGGTGCAG +
Preference number: 6 (lower is better)
Translates to: GAQAVAATSAKS*GPHGKHRSQVQ
Trigger: CTGCACCTGGGACCTGTGCTTGCCGTGAGGGCCCCAGGATTTGGCCGAAGTGGCGGCCACAGCCTGAGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673702.1
ENST00000673956.1
CDS CCA 72 bp ACGGGACCACCCAGGGGCTCTCCCGGTTCACACCAGTaGCGCCTCGTGGAGCAGGGCAGACCACAGCTTCCC +
Preference number: 6 (lower is better)
Translates to: TGPPRGSPGSHQ*RLVEQGRPQLP
Trigger: GGGAAGCTGTGGTCTGCCCTGCTCCACGAGGCGCCACTGGTGTGAACCGGGAGAGCCCCTGGGTGGTCCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371500.8
CDS CCA 72 bp CATGGTGCCTGCAGGGGGTGCCGAGTCAGATGCGCCTaGGCGCCAGGGCTGACGGAACCAGGCAGGCTGTTC +
Preference number: 6 (lower is better)
Translates to: HGACRGCRVRCA*APGLTEPGRLF
Trigger: GAACAGCCTGCCTGGTTCCGTCAGCCCTGGCGCCCAGGCGCATCTGACTCGGCACCCCCTGCAGGCACCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371500.8
ENST00000618387.1
ENST00000673702.1
CDS CCA 72 bp CGCAGGTCAATACCGCCACAGTCCACGACGCCCTCCTaGGAACAGGCACAGTCTCGGGGGCAGCTGACCGCG +
Preference number: 6 (lower is better)
Translates to: RRSIPPQSTTPS*EQAQSRGQLTA
Trigger: CGCGGTCAGCTGCCCCCGAGACTGTGCCTGTTCCCAGGAGGGCGTCGTGGACTGTGGCGGTATTGACCTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673702.1
ENST00000673956.1
CDS CAA 72 bp CGAGGCAGGCCACTGGGCACGCGCTCCAGCGCGTTGTaGTACAGGTGCACCGTGTGCAACCGCTTGAGGCCC +
Preference number: 6 (lower is better)
Translates to: RGRPLGTRSSAL*YRCTVCNRLRP
Trigger: GGGCCTCAAGCGGTTGCACACGGTGCACCTGTACAACAACGCGCTGGAGCGCGTGCCCAGTGGCCTGCCTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS CAA 72 bp CGGCGAGGCAGGCCACTGGGCACGCGCTCCAGCGCGTaGTTGTACAGGTGCACCGTGTGCAACCGCTTGAGG +
Preference number: 6 (lower is better)
Translates to: RRGRPLGTRSSA*LYRCTVCNRLR
Trigger: CCTCAAGCGGTTGCACACGGTGCACCTGTACAACAACGCGCTGGAGCGCGTGCCCAGTGGCCTGCCTCGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS CCA 72 bp CACCGTGTGCAACCGCTTGAGGCCCTGGAAGGCCAGTaGGTGGATGCCCTGCTCCCGCAGCTGGTTGCTGTG +
Preference number: 6 (lower is better)
Translates to: HRVQPLEALEGQ*VDALLPQLVAV
Trigger: CACAGCAACCAGCTGCGGGAGCAGGGCATCCACCCACTGGCCTTCCAGGGCCTCAAGCGGTTGCACACGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS GCA 72 bp ACGCGCTCCAGCGCGTTGTTGTACAGGTGCACCGTGTaGAACCGCTTGAGGCCCTGGAAGGCCAGTGGGTGG +
Preference number: 6 (lower is better)
Translates to: TRSSALLYRCTV*NRLRPWKASGW
Trigger: CCACCCACTGGCCTTCCAGGGCCTCAAGCGGTTGCACACGGTGCACCTGTACAACAACGCGCTGGAGCGCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS GCA 72 bp CTCACGCAGCTGAGCCATGCCCACCAGCGCCCCTCGTaGCAAGGCAGCCAGCTCATTGCGCTTGACCTTCAG +
Preference number: 6 (lower is better)
Translates to: LTQLSHAHQRPS*QGSQLIALDLQ
Trigger: CTGAAGGTCAAGCGCAATGAGCTGGCTGCCTTGGCACGAGGGGCGCTGGTGGGCATGGCTCAGCTGCGTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000471285.1
ENST00000490650.1
ENST00000618387.1
ENST00000673956.1
CDS CCA 72 bp TTGTACAGGTGCACCGTGTGCAACCGCTTGAGGCCCTaGAAGGCCAGTGGGTGGATGCCCTGCTCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: LYRCTVCNRLRP*KASGWMPCSRS
Trigger: GCTGCGGGAGCAGGGCATCCACCCACTGGCCTTCCAGGGCCTCAAGCGGTTGCACACGGTGCACCTGTACAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS CAA 72 bp GCAGGCGGCAGGTGCTTGGGCACGTGGCGCAGGAAGTaGCTGGACAGGATGAGGACCTCGACGTTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: AGGRCLGTWRRK*LDRMRTSTLLE
Trigger: CTCCAGCAACGTCGAGGTCCTCATCCTGTCCAGCAACTTCCTGCGCCACGTGCCCAAGCACCTGCCGCCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS CAA 90 bp GGCACGTGGCGCAGGAAGTTGCTGGACAGGATGAGGACCTCGACGTaGCTGGAGCCGTTGAACATGTTGTCCGGCAGCCCGGCGTCTGCC +
Preference number: 6 (lower is better)
Translates to: GTWRRKLLDRMRTST*LEPLNMLSGSPASA
Trigger: GGCAGACGCCGGGCTGCCGGACAACATGTTCAACGGCTCCAGCAACGTCGAGGTCCTCATCCTGTCCAGCAACTTCCTGCGCCACGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS TCA 72 bp GAGCTGATTCCCGGCGATGTCCAGCAGCTGCAGGGGTaGCCAAGGGAGTCAGGGACTCCCACCTGCAGATGG +
Preference number: 6 (lower is better)
Translates to: ELIPGDVQQLQG*PRESGTPTCRW
Trigger: CCATCTGCAGGTGGGAGTCCCTGACTCCCTTGGTCACCCCTGCAGCTGCTGGACATCGCCGGGAATCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471285.1
CDS GCA 72 bp TTCTCTGGGAGCCCTCGGGAAGTCAGGCGGTTGTTTTaGAGGTTCAGCGTCTCCAGCCGGTGCAGCCGGGAG +
Preference number: 6 (lower is better)
Translates to: FSGSPREVRRLF*RFSVSSRCSRE
Trigger: CTCCCGGCTGCACCGGCTGGAGACGCTGAACCTGCAAAACAACCGCCTGACTTCCCGAGGGCTCCCAGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS CCA 72 bp TCCTCCGCAAATTCGTTCTCTTCGGGGCTCAGGCTGTaGCCGCCACTTCGGCCAAATCCTGGGGCCCTCACG +
Preference number: 6 (lower is better)
Translates to: SSANSFSSGLRL*PPLRPNPGALT
Trigger: CGTGAGGGCCCCAGGATTTGGCCGAAGTGGCGGCCACAGCCTGAGCCCCGAAGAGAACGAATTTGCGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673702.1
ENST00000673956.1
CDS CAA 72 bp CTTCTCTGGGAGCCCTCGGGAAGTCAGGCGGTTGTTTaGCAGGTTCAGCGTCTCCAGCCGGTGCAGCCGGGA +
Preference number: 6 (lower is better)
Translates to: LLWEPSGSQAVV*QVQRLQPVQPG
Trigger: TCCCGGCTGCACCGGCTGGAGACGCTGAACCTGCAAAACAACCGCCTGACTTCCCGAGGGCTCCCAGAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS CAA 72 bp CTGGACAGGATGAGGACCTCGACGTTGCTGGAGCCGTaGAACATGTTGTCCGGCAGCCCGGCGTCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: LDRMRTSTLLEP*NMLSGSPASAS
Trigger: GCTGGCAGACGCCGGGCTGCCGGACAACATGTTCAACGGCTCCAGCAACGTCGAGGTCCTCATCCTGTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS CAA 90 bp ATGCCCACCAGCGCCCCTCGTGCCAAGGCAGCCAGCTCATTGCGCTaGACCTTCAGCACATGGACATTTCGAGGCAGCCCAGGTGGCAGC +
Preference number: 6 (lower is better)
Translates to: MPTSAPRAKAASSLR*TFSTWTFRGSPGGS
Trigger: GCTGCCACCTGGGCTGCCTCGAAATGTCCATGTGCTGAAGGTCAAGCGCAATGAGCTGGCTGCCTTGGCACGAGGGGCGCTGGTGGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000471285.1
ENST00000490650.1
ENST00000618387.1
ENST00000673956.1
CDS CAA 90 bp TTGTACAGGGCAGGCGGCAGGTGCTTGGGCACGTGGCGCAGGAAGTaGCTGGACAGGATGAGGACCTCGACGTTGCTGGAGCCGTTGAAC +
Preference number: 6 (lower is better)
Translates to: LYRAGGRCLGTWRRK*LDRMRTSTLLEPLN
Trigger: GTTCAACGGCTCCAGCAACGTCGAGGTCCTCATCCTGTCCAGCAACTTCCTGCGCCACGTGCCCAAGCACCTGCCGCCTGCCCTGTACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS TCA 72 bp GCGCCCCTCGTGCCAAGGCAGCCAGCTCATTGCGCTTaGCCTTCAGCACATGGACATTTCGAGGCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: APLVPRQPAHCA*PSAHGHFEAAQ
Trigger: CTGGGCTGCCTCGAAATGTCCATGTGCTGAAGGTCAAGCGCAATGAGCTGGCTGCCTTGGCACGAGGGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000471285.1
ENST00000490650.1
ENST00000618387.1
ENST00000673956.1
CDS TCA 72 bp CTCCTCCAGGCGTGCTCCTGGAGCGTTCCCACCTCGTaGCAGGCAACCACAGCTGCTCCCCAAGTCAGAAAC +
Preference number: 6 (lower is better)
Translates to: LLQACSWSVPTS*QATTAAPQVRN
Trigger: GTTTCTGACTTGGGGAGCAGCTGTGGTTGCCTGTCACGAGGTGGGAACGCTCCAGGAGCACGCCTGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471210.1
CDS GCA 72 bp GCAAAGTCTTCGCGGCCAATGCCTGTGATCTGGTTGTaGAGGATCATGAGGGTGCGCACGCGGCGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: AKSSRPMPVIWL*RIMRVRTRRGR
Trigger: CCTGCCTCGCCGCGTGCGCACCCTCATGATCCTGCACAACCAGATCACAGGCATTGGCCGCGAAGACTTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000471285.1
ENST00000618387.1
ENST00000673956.1
CDS GCA 72 bp GGGGCCGCAAGGAAGCAGCATCAGCCTAGTGGGGTGTaGCCTGGACTCCATTCCCTACCCATAGCTCCAGTC +
Preference number: 6 (lower is better)
Translates to: GAARKQHQPSGV*PGLHSLPIAPV
Trigger: GACTGGAGCTATGGGTAGGGAATGGAGTCCAGGGCACACCCCACTAGGCTGATGCTGCTTCCTTGCGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471210.1
CDS GCA 72 bp GGATTACAGGTGCCTCGGGAAGTCAGGCGGTTGTTTTaGAGGTTCAGCGTCTCCAGCCGGTGCAGCCGGGAG +
Preference number: 6 (lower is better)
Translates to: GLQVPREVRRLF*RFSVSSRCSRE
Trigger: CTCCCGGCTGCACCGGCTGGAGACGCTGAACCTGCAAAACAACCGCCTGACTTCCCGAGGCACCTGTAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471210.1
CDS CCA 72 bp AGACCCCCGGTGCCAGCTCTGGGCCAGGTCTGCATATaGGCTCTGGGGCACAGCAGTGATCACAACAGGAGT +
Preference number: 6 (lower is better)
Translates to: RPPVPALGQVCI*ALGHSSDHNRS
Trigger: ACTCCTGTTGTGATCACTGCTGTGCCCCAGAGCCCATATGCAGACCTGGCCCAGAGCTGGCACCGGGGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471210.1
CDS CAA 72 bp TTGAGGTGCAGCTTGTACAGGGCAGGCGGCAGGTGCTaGGGCACGTGGCGCAGGAAGTTGCTGGACAGGATG +
Preference number: 6 (lower is better)
Translates to: LRCSLYRAGGRC*GTWRRKLLDRM
Trigger: CATCCTGTCCAGCAACTTCCTGCGCCACGTGCCCAAGCACCTGCCGCCTGCCCTGTACAAGCTGCACCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS CAA 72 bp CCCACCAGCGCCCCTCGTGCCAAGGCAGCCAGCTCATaGCGCTTGACCTTCAGCACATGGACATTTCGAGGC +
Preference number: 6 (lower is better)
Translates to: PTSAPRAKAASS*RLTFSTWTFRG
Trigger: GCCTCGAAATGTCCATGTGCTGAAGGTCAAGCGCAATGAGCTGGCTGCCTTGGCACGAGGGGCGCTGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000471285.1
ENST00000490650.1
ENST00000618387.1
ENST00000673956.1
CDS CAA 72 bp AGTCCTAGAATCCAGTCCACCTGCTGGGCACCTCCCTaGGAATTCTCCCCCATGGCAGCAGACCCCCGGTGC +
Preference number: 6 (lower is better)
Translates to: SPRIQSTCWAPP*EFSPMAADPRC
Trigger: GCACCGGGGGTCTGCTGCCATGGGGGAGAATTCCAAGGGAGGTGCCCAGCAGGTGGACTGGATTCTAGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000471210.1
CDS CAA 72 bp CGGATTACAGGTGCCTCGGGAAGTCAGGCGGTTGTTTaGCAGGTTCAGCGTCTCCAGCCGGTGCAGCCGGGA +
Preference number: 6 (lower is better)
Translates to: RITGASGSQAVV*QVQRLQPVQPG
Trigger: TCCCGGCTGCACCGGCTGGAGACGCTGAACCTGCAAAACAACCGCCTGACTTCCCGAGGCACCTGTAATCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471210.1
CDS CCA 72 bp GTGGTGGCAAAGTCTTCGCGGCCAATGCCTGTGATCTaGTTGTGCAGGATCATGAGGGTGCGCACGCGGCGA +
Preference number: 6 (lower is better)
Translates to: VVAKSSRPMPVI*LCRIMRVRTRR
Trigger: TCGCCGCGTGCGCACCCTCATGATCCTGCACAACCAGATCACAGGCATTGGCCGCGAAGACTTTGCCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000471285.1
ENST00000618387.1
ENST00000673956.1
CDS CCA 72 bp CTCCGCGGGCTCGGGCTCCTTCCATTCAAGTCAAGCTaGGCGCTCTCCGCGACGCAAGTTTTGTTGTGGGTT +
Preference number: 6 (lower is better)
Translates to: LRGLGLLPFKSS*ALSATQVLLWV
Trigger: AACCCACAACAAAACTTGCGTCGCGGAGAGCGCCCAGCTTGACTTGAATGGAAGGAGCCCGAGCCCGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395871.7
CDS CAA 72 bp CGCAGGAAGTTGCTGGACAGGATGAGGACCTCGACGTaGCTGGAGCCGTTGAACATGTTGTCCGGCAGCCCG +
Preference number: 6 (lower is better)
Translates to: RRKLLDRMRTST*LEPLNMLSGSP
Trigger: CGGGCTGCCGGACAACATGTTCAACGGCTCCAGCAACGTCGAGGTCCTCATCCTGTCCAGCAACTTCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS CAA 72 bp AGCGCCCCTCGTGCCAAGGCAGCCAGCTCATTGCGCTaGACCTTCAGCACATGGACATTTCGAGGCAGCCCA +
Preference number: 6 (lower is better)
Translates to: SAPRAKAASSLR*TFSTWTFRGSP
Trigger: TGGGCTGCCTCGAAATGTCCATGTGCTGAAGGTCAAGCGCAATGAGCTGGCTGCCTTGGCACGAGGGGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000471285.1
ENST00000490650.1
ENST00000618387.1
ENST00000673956.1
CDS CAA 90 bp CTGGACAGGATGAGGACCTCGACGTTGCTGGAGCCGTTGAACATGTaGTCCGGCAGCCCGGCGTCTGCCAGCTTGTTGTTGTGCAGGTAC +
Preference number: 6 (lower is better)
Translates to: LDRMRTSTLLEPLNM*SGSPASASLLLCRY
Trigger: GTACCTGCACAACAACAAGCTGGCAGACGCCGGGCTGCCGGACAACATGTTCAACGGCTCCAGCAACGTCGAGGTCCTCATCCTGTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS CAA 90 bp TTGTTGTTCTTGAGGTGCAGCTTGTACAGGGCAGGCGGCAGGTGCTaGGGCACGTGGCGCAGGAAGTTGCTGGACAGGATGAGGACCTCG +
Preference number: 6 (lower is better)
Translates to: LLFLRCSLYRAGGRC*GTWRRKLLDRMRTS
Trigger: CGAGGTCCTCATCCTGTCCAGCAACTTCCTGCGCCACGTGCCCAAGCACCTGCCGCCTGCCCTGTACAAGCTGCACCTCAAGAACAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS CAA 72 bp ATGAGGACCTCGACGTTGCTGGAGCCGTTGAACATGTaGTCCGGCAGCCCGGCGTCTGCCAGCTTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: MRTSTLLEPLNM*SGSPASASLLL
Trigger: CAACAACAAGCTGGCAGACGCCGGGCTGCCGGACAACATGTTCAACGGCTCCAGCAACGTCGAGGTCCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS CAA 90 bp AGGAAGTTGCTGGACAGGATGAGGACCTCGACGTTGCTGGAGCCGTaGAACATGTTGTCCGGCAGCCCGGCGTCTGCCAGCTTGTTGTTG +
Preference number: 6 (lower is better)
Translates to: RKLLDRMRTSTLLEP*NMLSGSPASASLLL
Trigger: CAACAACAAGCTGGCAGACGCCGGGCTGCCGGACAACATGTTCAACGGCTCCAGCAACGTCGAGGTCCTCATCCTGTCCAGCAACTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS CAA 90 bp TTGGGCGTGGAGTCGAAGGCATTGGCGGGCACCGCACTAATCTTGTaGTTCTGCAGGTACAGGTACTCAAGTGACTCGGGGAGCCCCTCG +
Preference number: 6 (lower is better)
Translates to: LGVESKALAGTALIL*FCRYRYSSDSGSPS
Trigger: CGAGGGGCTCCCCGAGTCACTTGAGTACCTGTACCTGCAGAACAACAAGATTAGTGCGGTGCCCGCCAATGCCTTCGACTCCACGCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000471285.1
ENST00000618387.1
ENST00000673956.1
CDS CAA 90 bp AGGTTGGGCGTGGAGTCGAAGGCATTGGCGGGCACCGCACTAATCTaGTTGTTCTGCAGGTACAGGTACTCAAGTGACTCGGGGAGCCCC +
Preference number: 6 (lower is better)
Translates to: RLGVESKALAGTALI*LFCRYRYSSDSGSP
Trigger: GGGGCTCCCCGAGTCACTTGAGTACCTGTACCTGCAGAACAACAAGATTAGTGCGGTGCCCGCCAATGCCTTCGACTCCACGCCCAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000471285.1
ENST00000618387.1
ENST00000673956.1
CDS CAA 90 bp CTGGAGCCGTTGAACATGTTGTCCGGCAGCCCGGCGTCTGCCAGCTaGTTGTTGTGCAGGTACACAGACCTCAAGTTTGGCTTCTGGCCA +
Preference number: 6 (lower is better)
Translates to: LEPLNMLSGSPASAS*LLCRYTDLKFGFWP
Trigger: TGGCCAGAAGCCAAACTTGAGGTCTGTGTACCTGCACAACAACAAGCTGGCAGACGCCGGGCTGCCGGACAACATGTTCAACGGCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS GCA 72 bp TTGTCCGGCAGCCCGGCGTCTGCCAGCTTGTTGTTGTaGAGGTACACAGACCTCAAGTTTGGCTTCTGGCCA +
Preference number: 6 (lower is better)
Translates to: LSGSPASASLLL*RYTDLKFGFWP
Trigger: TGGCCAGAAGCCAAACTTGAGGTCTGTGTACCTGCACAACAACAAGCTGGCAGACGCCGGGCTGCCGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS GCA 72 bp GGAGCCGTTGAACATGTTGTCCGGCAGCCCGGCGTCTaGCAGCTTGTTGTTGTGCAGGTACACAGACCTCAA +
Preference number: 6 (lower is better)
Translates to: GAVEHVVRQPGV*QLVVVQVHRPQ
Trigger: TTGAGGTCTGTGTACCTGCACAACAACAAGCTGGCAGACGCCGGGCTGCCGGACAACATGTTCAACGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS CAA 72 bp GCCAGCTTGTTAAACCTGAGAAAGATCCCCTTGAGGTaGGGCGTGGAGTCGAAGGCATTGGCGGGCACCGCA +
Preference number: 6 (lower is better)
Translates to: ASLLNLRKIPLR*GVESKALAGTA
Trigger: TGCGGTGCCCGCCAATGCCTTCGACTCCACGCCCAACCTCAAGGGGATCTTTCTCAGGTTTAACAAGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000471285.1
ENST00000490650.1
ENST00000618387.1
ENST00000673956.1
CDS CAA 90 bp AACCTGAGAAAGATCCCCTTGAGGTTGGGCGTGGAGTCGAAGGCATaGGCGGGCACCGCACTAATCTTGTTGTTCTGCAGATGGGCGAGG +
Preference number: 6 (lower is better)
Translates to: NLRKIPLRLGVESKA*AGTALILLFCRWAR
Trigger: CCTCGCCCATCTGCAGAACAACAAGATTAGTGCGGTGCCCGCCAATGCCTTCGACTCCACGCCCAACCTCAAGGGGATCTTTCTCAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490650.1
CDS GCA 72 bp AAGGCATTGGCGGGCACCGCACTAATCTTGTTGTTCTaGAGGTACAGGTACTCAAGTGACTCGGGGAGCCCC +
Preference number: 6 (lower is better)
Translates to: KALAGTALILLF*RYRYSSDSGSP
Trigger: GGGGCTCCCCGAGTCACTTGAGTACCTGTACCTGCAGAACAACAAGATTAGTGCGGTGCCCGCCAATGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000471285.1
ENST00000618387.1
ENST00000673956.1
CDS GCA 72 bp CACACATGGACATCTACGGGCAGTTCAAACTCGACATaGTATCTCCTCCAGGCGTGCTCCTGGAGCGTTCCC +
Preference number: 6 (lower is better)
Translates to: HTWTSTGSSNST*YLLQACSWSVP
Trigger: GGGAACGCTCCAGGAGCACGCCTGGAGGAGATAGCATGTCGAGTTTGAACTGCCCGTAGATGTCCATGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471210.1
CDS CCA 72 bp AAGGCCCTCGGAACCGAAGATCCTGTGACAAGGTTCTaGAAGCTCAGCTTCTCTGAAGCCTCTCTCCTGCGC +
Preference number: 6 (lower is better)
Translates to: KALGTEDPVTRF*KLSFSEASLLR
Trigger: GCGCAGGAGAGAGGCTTCAGAGAAGCTGAGCTTCCAGAACCTTGTCACAGGATCTTCGGTTCCGAGGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471210.1
CDS CAA 72 bp ATGTTGTCCGGCAGCCCGGCGTCTGCCAGCTTGTTGTaGTGCAGGTACACAGACCTCAAGTTTGGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: MLSGSPASASLL*CRYTDLKFGFW
Trigger: CCAGAAGCCAAACTTGAGGTCTGTGTACCTGCACAACAACAAGCTGGCAGACGCCGGGCTGCCGGACAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS CAA 72 bp AAGATCCCCTTGAGGTTGGGCGTGGAGTCGAAGGCATaGGCGGGCACCGCACTAATCTTGTTGTTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: KIPLRLGVESKA*AGTALILLFCR
Trigger: CCTGCAGAACAACAAGATTAGTGCGGTGCCCGCCAATGCCTTCGACTCCACGCCCAACCTCAAGGGGATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000471285.1
ENST00000618387.1
ENST00000673956.1
CDS GCA 72 bp CTGGGCCCCACACACAGTCCTTCCATTTCCATCTGGTaGCTCTGTTTAAGAAGTCTCTGCCTCGCCACTGAC +
Preference number: 6 (lower is better)
Translates to: LGPTHSPSISIW*LCLRSLCLATD
Trigger: GTCAGTGGCGAGGCAGAGACTTCTTAAACAGAGGCACCAGATGGAAATGGAAGGACTGTGTGTGGGGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471210.1
CDS CAA 72 bp AACATGTTGTCCGGCAGCCCGGCGTCTGCCAGCTTGTaGTTGTGCAGGTACACAGACCTCAAGTTTGGCTTC +
Preference number: 6 (lower is better)
Translates to: NMLSGSPASASL*LCRYTDLKFGF
Trigger: GAAGCCAAACTTGAGGTCTGTGTACCTGCACAACAACAAGCTGGCAGACGCCGGGCTGCCGGACAACATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS CAA 72 bp TTGAACATGTTGTCCGGCAGCCCGGCGTCTGCCAGCTaGTTGTTGTGCAGGTACACAGACCTCAAGTTTGGC +
Preference number: 6 (lower is better)
Translates to: LNMLSGSPASAS*LLCRYTDLKFG
Trigger: GCCAAACTTGAGGTCTGTGTACCTGCACAACAACAAGCTGGCAGACGCCGGGCTGCCGGACAACATGTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS CAA 72 bp GAGTCGAAGGCATTGGCGGGCACCGCACTAATCTTGTaGTTCTGCAGGTACAGGTACTCAAGTGACTCGGGG +
Preference number: 6 (lower is better)
Translates to: ESKALAGTALIL*FCRYRYSSDSG
Trigger: CCCCGAGTCACTTGAGTACCTGTACCTGCAGAACAACAAGATTAGTGCGGTGCCCGCCAATGCCTTCGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000471285.1
ENST00000618387.1
ENST00000673956.1
CDS CAA 72 bp AAGATCCCCTTGAGGTTGGGCGTGGAGTCGAAGGCATaGGCGGGCACCGCACTAATCTTGTTGTTCTGCAGA +
Preference number: 6 (lower is better)
Translates to: KIPLRLGVESKA*AGTALILLFCR
Trigger: TCTGCAGAACAACAAGATTAGTGCGGTGCCCGCCAATGCCTTCGACTCCACGCCCAACCTCAAGGGGATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490650.1
CDS CAA 90 bp AACCTGAGAAAGATCCCCTTGAGGTTGGGCGTGGAGTCGAAGGCATaGGCGGGCACCGCACTAATCTTGTTGTTCTGCAGGTACAGGTAC +
Preference number: 6 (lower is better)
Translates to: NLRKIPLRLGVESKA*AGTALILLFCRYRY
Trigger: GTACCTGTACCTGCAGAACAACAAGATTAGTGCGGTGCCCGCCAATGCCTTCGACTCCACGCCCAACCTCAAGGGGATCTTTCTCAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000471285.1
ENST00000618387.1
ENST00000673956.1
CDS CAA 90 bp TTCCCCAAGCGGCCACGGTCCTTGGAAATGTCACCAAACTCTAAGTaGCCTTCAATGTCCAAGACCTGCAGGTGCTTCAGCCTCCGGAAG +
Preference number: 6 (lower is better)
Translates to: FPKRPRSLEMSPNSK*PSMSKTCRCFSLRK
Trigger: CTTCCGGAGGCTGAAGCACCTGCAGGTCTTGGACATTGAAGGCAACTTAGAGTTTGGTGACATTTCCAAGGACCGTGGCCGCTTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000490650.1
ENST00000618387.1
ENST00000673956.1
CDS GCA 72 bp TCACCAAACTCTAAGTTGCCTTCAATGTCCAAGACCTaGAGGTGCTTCAGCCTCCGGAAGGCACTGTCCACC +
Preference number: 6 (lower is better)
Translates to: SPNSKLPSMSKT*RCFSLRKALST
Trigger: GGTGGACAGTGCCTTCCGGAGGCTGAAGCACCTGCAGGTCTTGGACATTGAAGGCAACTTAGAGTTTGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000471285.1
ENST00000490650.1
ENST00000618387.1
ENST00000673956.1
CDS CAA 72 bp GTGGAGTCGAAGGCATTGGCGGGCACCGCACTAATCTaGTTGTTCTGCAGGTACAGGTACTCAAGTGACTCG +
Preference number: 6 (lower is better)
Translates to: VESKALAGTALI*LFCRYRYSSDS
Trigger: CGAGTCACTTGAGTACCTGTACCTGCAGAACAACAAGATTAGTGCGGTGCCCGCCAATGCCTTCGACTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000471285.1
ENST00000618387.1
ENST00000673956.1
CDS GCA 72 bp GGCCACGGTCCTTGGAAATGTCACCAAACTCTAAGTTaGCTTCAATGTCCAAGACCTGCAGGTGCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: GHGPWKCHQTLS*LQCPRPAGASA
Trigger: GGCTGAAGCACCTGCAGGTCTTGGACATTGAAGGCAACTTAGAGTTTGGTGACATTTCCAAGGACCGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000490650.1
ENST00000618387.1
ENST00000673956.1
CDS GCA 72 bp TCCATTTCCATCTGGTGCCTCTGTTTAAGAAGTCTCTaGCTCGCCACTGACTGTAAGCACAGGGCAGGGAAC +
Preference number: 6 (lower is better)
Translates to: SISIWCLCLRSL*LATDCKHRAGN
Trigger: GTTCCCTGCCCTGTGCTTACAGTCAGTGGCGAGGCAGAGACTTCTTAAACAGAGGCACCAGATGGAAATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471210.1
CDS CCA 72 bp ATAGTTGGCAGCAAAGTCCACACTGATCAGGGCGTTTaGCAGGAAGCGGGGTGCCAAGGTCAGCTTGTTATT +
Preference number: 6 (lower is better)
Translates to: IVGSKVHTDQGV*QEAGCQGQLVI
Trigger: AATAACAAGCTGACCTTGGCACCCCGCTTCCTGCCAAACGCCCTGATCAGTGTGGACTTTGCTGCCAACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
CDS CAA 72 bp CGGCCACGGTCCTTGGAAATGTCACCAAACTCTAAGTaGCCTTCAATGTCCAAGACCTGCAGGTGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: RPRSLEMSPNSK*PSMSKTCRCFS
Trigger: GCTGAAGCACCTGCAGGTCTTGGACATTGAAGGCAACTTAGAGTTTGGTGACATTTCCAAGGACCGTGGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000490650.1
ENST00000618387.1
ENST00000673956.1
CDS CAA 90 bp GCGGTCCATCGTCCTAGGTCACATCTGCATCACCTTGTCACTATCTaGTTTCCTCTTCCTCCTCCTCCTCCTCTTCCTCCTCCTCCTTTT +
Preference number: 6 (lower is better)
Translates to: AVHRPRSHLHHLVTI*FPLPPPPPLPPPPF
Trigger: AAAAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAAACAAGATAGTGACAAGGTGATGCAGATGTGACCTAGGACGATGGACCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS CCA 72 bp CCTCCTCCTTTTCCTTCCCCAAGCGGCCACGGTCCTTaGAAATGTCACCAAACTCTAAGTTGCCTTCAATGT +
Preference number: 6 (lower is better)
Translates to: PPPFPSPSGHGP*KCHQTLSCLQC
Trigger: ACATTGAAGGCAACTTAGAGTTTGGTGACATTTCCAAGGACCGTGGCCGCTTGGGGAAGGAAAAGGAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000490650.1
ENST00000618387.1
ENST00000673956.1
CDS CAA 72 bp TCCTCCTCCTTTTCCTTCCCCAAGCGGCCACGGTCCTaGGAAATGTCACCAAACTCTAAGTTGCCTTCAATG +
Preference number: 6 (lower is better)
Translates to: SSSFSFPKRPRS*EMSPNSKLPSM
Trigger: CATTGAAGGCAACTTAGAGTTTGGTGACATTTCCAAGGACCGTGGCCGCTTGGGGAAGGAAAAGGAGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000490650.1
ENST00000618387.1
ENST00000673956.1
CDS CAA 72 bp CGTCCTAGGTCACATCTGCATCACCTTGTCACTATCTaGTTTCCTCTTCCTCCTCCTCCTCCTCTTCCTCCT +
Preference number: 6 (lower is better)
Translates to: RPRSHLHHLVTI*FPLPPPPPLPP
Trigger: AGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAAACAAGATAGTGACAAGGTGATGCAGATGTGACCTAGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1
ENST00000673956.1
CDS TCA 72 bp CCAAGGTCAGCTTGTTATTGGCCAAGTACAGGTAATTaGGGTTGGTCAGATGCTCAAACGCCTTCTCTGGGA +
Preference number: 6 (lower is better)
Translates to: PRSACYWPSTGN*GWSDAQTPSLG
Trigger: TCCCAGAGAAGGCGTTTGAGCATCTGACCAACCTCAATTACCTGTACTTGGCCAATAACAAGCTGACCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312553.10
ENST00000371500.8
ENST00000395871.7
ENST00000618387.1