RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for POC1A (Homo sapiens)

Ensembl gene IDs: ENSG00000164087

Ensembl transcript IDs: ENST00000296484.7, ENST00000394970.6, ENST00000474012.1

Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTaGCCTGCCACCTGCAAATCCACCGAGCTCCTGATTCCTGCTCCC +
Preference number: 1 (lower is better)
Translates to: EFSPLYLPKSHGTNP*PATCKSTELLIPAP
Trigger: GGGAGCAGGAATCAGGAGCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
3UTR CCA 90 bp TGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATaGTACAAATCCCTGGCCTGCCACCTGCAAATCCACCGAGCTCCT +
Preference number: 1 (lower is better)
Translates to: CDSHRVQSPLFTQVP*YKSLACHLQIHRAP
Trigger: AGGAGCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
3UTR TCA 90 bp CTGAAAAGCCACCACCCACTTGAGAGGGCTTGTTCTCAACAAACCTaGCTCAGATGGGCCCACTTTGGGCCTTTAGTCAGATTTAGAGAA +
Preference number: 1 (lower is better)
Translates to: LKSHHPLERACSQQT*LRWAHFGPLVRFRE
Trigger: TTCTCTAAATCTGACTAAAGGCCCAAAGTGGGCCCATCTGAGTCAGGTTTGTTGAGAACAAGCCCTCTCAAGTGGGTGGTGGCTTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
3UTR CCA 90 bp AAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTaGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGCCCG +
Preference number: 1 (lower is better)
Translates to: KEQTFSSGSFTLSKM*SSHSGLKHHLCVSP
Trigger: CGGGCTCACACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
3UTR-3UTR CCA 90 bp GCCACAATCTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATGTGAGCCCGGCCCACTaGGGACCTCTGGCTGCCAGG +
Preference number: 2 (lower is better)
Translates to: ATISGPRRSRHFQVAPLHVSPAH*GPLAAR
Trigger: CCTGGCAGCCAGAGGTCCCCAGTGGGCCGGGCTCAC...ATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAGATTGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
3UTR-3UTR TCA 90 bp GTCCAAATGATGAGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGAGCATCATTTGTGTGTaGGCCCGGCCCACTGGGGAC +
Preference number: 2 (lower is better)
Translates to: VQMMSENQGIVEPPPPEGSIICV*ARPTGD
Trigger: GTCCCCAGTGGGCCGGGCTCACACACAAATGATGCT...CCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACTCATCATTTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
3UTR-3UTR GCA 90 bp GAGGGCTTGTTCTCAACAAACCTGACTCAGATGGGCCCACTTTGGGCCTTTAGTCCCTGGCCTGCCACCTaGAAATCCACCGAGCTCCTG +
Preference number: 2 (lower is better)
Translates to: EGLFSTNLTQMGPLWAFSPWPAT*KSTELL
Trigger: CAGGAGCTCGGTGGATTTGCAGGTGGCAGGCCAGGG...ACTAAAGGCCCAAAGTGGGCCCATCTGAGTCAGGTTTGTTGAGAACAAGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
3UTR-3UTR GCA 90 bp CAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGCCCGGCCCCTGGCCTGCCACCTaGAAATCCACCGAGCTCCTG +
Preference number: 2 (lower is better)
Translates to: QNVVLSFGSEASFVCEPGPWPAT*KSTELL
Trigger: CAGGAGCTCGGTGGATTTGCAGGTGGCAGGCCAGGG...GCCGGGCTCACACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
3UTR-3UTR GCA 90 bp CTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGCCCGGCCCACTGGGGACCTACAAATCCCTGGCCTaGCACCTGCAAATCCACCGA +
Preference number: 2 (lower is better)
Translates to: LSFGSEASFVCEPGPLGTYKSLA*HLQIHR
Trigger: TCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTA...GGTCCCCAGTGGGCCGGGCTCACACACAAATGATGCTTCAGACCCGAATGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
3UTR-3UTR GCA 90 bp GTCCAAATGATGAGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGTACAAATCCCTGGCCTaGCACCTGCAAATCCACCGA +
Preference number: 2 (lower is better)
Translates to: VQMMSENQGIVEPPPPEGYKSLA*HLQIHR
Trigger: TCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTA...CCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACTCATCATTTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
3UTR-3UTR GCA 90 bp TCCAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCTACAAATCCCTGGCCTaGCACCTGCAAATCCACCGA +
Preference number: 2 (lower is better)
Translates to: SSMDVIPTEFSPLYLPKSYKSLA*HLQIHR
Trigger: TCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTA...GGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
3UTR-3UTR CCA 90 bp AATTTTGAGATTCCTGTGCCCTCACTCACGCAAGGAGGAAGTCACCTGGCTCCAACATTAAGCAAAATGTaGTCCTCTCATTCGGGTCTG +
Preference number: 2 (lower is better)
Translates to: NFEIPVPSLTQGGSHLAPTLSKM*SSHSGL
Trigger: CAGACCCGAATGAGAGGACCACATTTTGCTTAATGT...TGGAGCCAGGTGACTTCCTCCTTGCGTGAGTGAGGGCACAGGAATCTCAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296484.7
3UTR-3UTR CCA 90 bp ATGAGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACAAGCAGACATTTTCAAGTaGCTCCTTTACATTAAGCAA +
Preference number: 2 (lower is better)
Translates to: MSENQGIVEPPPPEGEPQADIFK*LLYIKQ
Trigger: TTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGC...TTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
3UTR-3UTR CCA 90 bp AGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAAGGCATCCATGGTACAAATCCCTaGCCTGCCACCTGCAAATCC +
Preference number: 2 (lower is better)
Translates to: RGRKSQSHVQMMSENQGIHGTNP*PATCKS
Trigger: GGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATG...GATGCCTTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
3UTR-3UTR CCA 90 bp AGAAAACCCCCGGCTCATCCAATCAATGTGCAATCAATTTCTACACCATGGCAGGTGCAGATAGCAAGGTaGAGGGCAGAACTGCAAAAA +
Preference number: 2 (lower is better)
Translates to: RKPPAHPINVQSISTPWQVQIAR*RAELQK
Trigger: TTTTTGCAGTTCTGCCCTCCACCTTGCTATCTGCAC...CTGCCATGGTGTAGAAATTGATTGCACATTGATTGGATGAGCCGGGGGTTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
3UTR-3UTR TCA 90 bp AGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAAGGCATCGCTCCAGTATGGATGTaGTTCCCACAGAGTTCAGTC +
Preference number: 2 (lower is better)
Translates to: RGRKSQSHVQMMSENQGIAPVWM*FPQSSV
Trigger: GACTGAACTCTGTGGGAATCACATCCATACTGGAGC...GATGCCTTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
3UTR-3UTR CCA 90 bp AGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAAGGCATCTTTACCCAAGTCCCATaGTACAAATCCCTGGCCTGC +
Preference number: 2 (lower is better)
Translates to: RGRKSQSHVQMMSENQGIFTQVP*YKSLAC
Trigger: GCAGGCCAGGGATTTGTACCATGGGACTTGGGTAAA...GATGCCTTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
3UTR-3UTR CCA 90 bp GAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTGGTCCTCTCATTTTACCCAAGTCCCATaGTACAAATCCCTGGCCTGC +
Preference number: 2 (lower is better)
Translates to: EQTFSSGSFTLSKMWSSHFTQVP*YKSLAC
Trigger: GCAGGCCAGGGATTTGTACCATGGGACTTGGGTAAA...ATGAGAGGACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
3UTR-3UTR CCA 90 bp ATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGGTGCAGATAGCAAGGTaGAGGGCAGAACTGCAAAAA +
Preference number: 2 (lower is better)
Translates to: IKQNVVLSFGSEASFVCEVQIAR*RAELQK
Trigger: TTTTTGCAGTTCTGCCCTCCACCTTGCTATCTGCAC...CTCACACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
3UTR-3UTR CCA 90 bp TTTAATTTTGAGATTCCTGTGCCCTCACTCACGCAAGGAGGAAGTCACCTGGCTGCAGACATTTTCAAGTaGCTCCTTTACATTAAGCAA +
Preference number: 2 (lower is better)
Translates to: FNFEIPVPSLTQGGSHLAADIFK*LLYIKQ
Trigger: TTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGC...AGCCAGGTGACTTCCTCCTTGCGTGAGTGAGGGCACAGGAATCTCAAAATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296484.7
3UTR CCA 72 bp GGTCTGAAGCATCATTTGTGTGTGAGCCCGGCCCACTaGGGACCTCTGGCTGCCAGGTGGAGAGCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: GLKHHLCVSPAH*GPLAARWRASW
Trigger: CCAGGAGGCTCTCCACCTGGCAGCCAGAGGTCCCCAGTGGGCCGGGCTCACACACAAATGATGCTTCAGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
3UTR TCA 72 bp CACCACCCACTTGAGAGGGCTTGTTCTCAACAAACCTaGCTCAGATGGGCCCACTTTGGGCCTTTAGTCAGA +
Preference number: 3 (lower is better)
Translates to: HHPLERACSQQT*LRWAHFGPLVR
Trigger: TCTGACTAAAGGCCCAAAGTGGGCCCATCTGAGTCAGGTTTGTTGAGAACAAGCCCTCTCAAGTGGGTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
3UTR CCA 72 bp CCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTaGCCTGCCACCTGCAAATCCACCGAGCTCCTGATT +
Preference number: 3 (lower is better)
Translates to: PLYLPKSHGTNP*PATCKSTELLI
Trigger: AATCAGGAGCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
3UTR GCA 72 bp AGTGCAATGAAGTCAGGTTTAATTTTGAGATTCCTGTaGCCTCACTCACGCAAGGAGGAAGTCACCTGGCTC +
Preference number: 3 (lower is better)
Translates to: SAMKSGLILRFL*PHSRKEEVTWL
Trigger: GAGCCAGGTGACTTCCTCCTTGCGTGAGTGAGGGCACAGGAATCTCAAAATTAAACCTGACTTCATTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296484.7
3UTR-3UTR CAA 90 bp TCAGATTTAGAGAAAACCCCCGGCTCATCCAATCAATGTGCAATCAATTTCTACGGTCTGAAGCATCATTaGTGTGTGAGCCCGGCCCAC +
Preference number: 3 (lower is better)
Translates to: SDLEKTPGSSNQCAINFYGLKHH*CVSPAH
Trigger: GTGGGCCGGGCTCACACACAAATGATGCTTCAGACC...GTAGAAATTGATTGCACATTGATTGGATGAGCCGGGGGTTTTCTCTAAATCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
3UTR TCA 72 bp GCAGAACTGCAAAAATCCAGGGCTCCAGTATGGATGTaGTTCCCACAGAGTTCAGTCCCCTTTATTTACCCA +
Preference number: 3 (lower is better)
Translates to: AELQKSRAPVWM*FPQSSVPFIYP
Trigger: TGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTGGAGCCCTGGATTTTTGCAGTTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
3UTR CCA 72 bp ACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTaGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGT +
Preference number: 3 (lower is better)
Translates to: TFSSGSFTLSKM*SSHSGLKHHLC
Trigger: ACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp AAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACAATCTCAGGACCCCGCTGGCAGATTCCCCATaGAGCTGGCCAGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KASWSHLLQRGSHNLRTPLADSP*SWPVWL
Trigger: CAGCCACACTGGCCAGCTCCATGGGGAATCTGCCAG...CGGGGTCCTGAGATTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS-3UTR CCA 90 bp AGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCACCTGCCAGCCATGGCGGGGCTaGCGGCGCCGAAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SPLYLPKSHGTNPWPATCQPWRG*RRRRQL
Trigger: CAGCTGCCTTCGGCGCCGCCAGCCCCGCCATGGCTG...GCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp AGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACAATCTGTGAGCCCGGCCCACTaGGGACCTCTGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SENQGIVEPPPPEGEPQSVSPAH*GPLAAR
Trigger: CCTGGCAGCCAGAGGTCCCCAGTGGGCCGGGCTCAC...AGATTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp ATGATGAGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACGAAGGCAGCTGCGGTaGCCGTTGCGGCCCGTTCAG +
Preference number: 4 (lower is better)
Translates to: MMSENQGIVEPPPPEGEPRRQLR*PLRPVQ
Trigger: CTGAACGGGCCGCAACGGCCACCGCAGCTGCCTTCG...TGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACTCATCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394970.6
CDS-3UTR TCA 90 bp AGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCACCTGCTGCTGCAGCAGCCGGTaGGTCCGCACGTCCCACACC +
Preference number: 4 (lower is better)
Translates to: SPLYLPKSHGTNPWPATCCCSSR*VRTSHT
Trigger: GGTGTGGGACGTGCGGACTCACCGGCTGCTGCAGCA...GCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp AAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACAATCTCAGGACCCCGAGGACTGGCCATCACTaGAGAAGTGGACACTCCTCA +
Preference number: 4 (lower is better)
Translates to: KASWSHLLQRGSHNLRTPRTGHH*RSGHSS
Trigger: TGAGGAGTGTCCACTTCTGCAGTGATGGCCAGTCCT...CGGGGTCCTGAGATTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp ATGAGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACAAGCTGGCCAGTGTGGCTaGGGGCCTCGGCACTTTCGT +
Preference number: 4 (lower is better)
Translates to: MSENQGIVEPPPPEGEPQAGQCG*GPRHFR
Trigger: ACGAAAGTGCCGAGGCCCCCAGCCACACTGGCCAGC...TTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp ATGAGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACAAGAAGCGGTAGGCGCGTaGCTGCGGCTTCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: MSENQGIVEPPPPEGEPQEAVGA*LRLHVP
Trigger: TGGCACATGAAGCCGCAGTCACGCGCCTACCGCTTC...TTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp TCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACAATCTCAGGACCCGAGTTGCCCACACTTTaGCTGTCTTGTCGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: SRHRGATSSRGGATISGPELPTL*LSCRQR
Trigger: CCTCTGACGACAAGACAGTCAAAGTGTGGGCAACTC...GGGTCCTGAGATTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp CAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGCCCGGCCACTGGCAGACACGATaGGCCGCCCGTCGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: QNVVLSFGSEASFVCEPGHWQTR*AARRGR
Trigger: TCTCCCCCGACGGGCGGCTCATCGTGTCTGCCAGTG...GCCGGGCTCACACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp TCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACAATCTCAGGACCCAGAATGGAGACTGTCTaGGTGAGGACATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SRHRGATSSRGGATISGPRMETV*VRTSSW
Trigger: CCAGCTGGATGTCCTCACTCAGACAGTCTCCATTCT...GGGTCCTGAGATTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS-3UTR GCA 90 bp ATGATGAGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACCCTGGCCTGCCACCTaGAAATCCACCGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: MMSENQGIVEPPPPEGEPPWPAT*KSTELL
Trigger: CAGGAGCTCGGTGGATTTGCAGGTGGCAGGCCAGGG...TGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACTCATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp ATGAGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACAACCCTGGCCTGCCACCTaGAAATCCACCGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: MSENQGIVEPPPPEGEPQPWPAT*KSTELL
Trigger: CAGGAGCTCGGTGGATTTGCAGGTGGCAGGCCAGGG...TTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp TCCCATGGTACAAATCCCTGGCCTGCCACCTGCAAATCCACCGAGCTCCTGATTGGCAACAGTGGTGGCTaGTCCCTGATGCCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: SHGTNPWPATCKSTELLIGNSGG*SLMPVE
Trigger: CTCCACGGGCATCAGGGACCAGCCACCACTGTTGCC...AATCAGGAGCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp ATGATGAGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCAGGCAACAGTGGTGGCTaGTCCCTGATGCCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: MMSENQGIVEPPPPEGEPGNSGG*SLMPVE
Trigger: CTCCACGGGCATCAGGGACCAGCCACCACTGTTGCC...TGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACTCATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp ATGATGAGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACATCCTTGTGGCCAGTaGAGCGGTAGGCGCGTGACT +
Preference number: 4 (lower is better)
Translates to: MMSENQGIVEPPPPEGEPHPCGQ*SGRRVT
Trigger: AGTCACGCGCCTACCGCTTCACTGGCCACAAGGATG...TGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACTCATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp AAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACAATCTCAGGACCCCGAGGAATTTCTGGCGATaGGTTGCCCACACTTTGACT +
Preference number: 4 (lower is better)
Translates to: KASWSHLLQRGSHNLRTPRNFWR*VAHTLT
Trigger: AGTCAAAGTGTGGGCAACTCATCGCCAGAAATTCCT...CGGGGTCCTGAGATTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp GCCACAATCTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATCACTGGCAGACACGATaGGCCGCCCGTCGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: ATISGPRRSRHFQVAPLHHWQTR*AARRGR
Trigger: TCTCCCCCGACGGGCGGCTCATCGTGTCTGCCAGTG...ATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAGATTGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp TCCCATGGTACAAATCCCTGGCCTGCCACCTGCAAATCCACCGAGCTCCTGATTAGCATCATTTGTGTGTaGGCCCGGCCCACTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SHGTNPWPATCKSTELLISIICV*ARPTGD
Trigger: GTCCCCAGTGGGCCGGGCTCACACACAAATGATGCT...AATCAGGAGCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp AAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACAATCTCAGGACCCCGTGTTCTCAACAAACCTaGCTCAGATGGGCCCACTTT +
Preference number: 4 (lower is better)
Translates to: KASWSHLLQRGSHNLRTPCSQQT*LRWAHF
Trigger: AAAGTGGGCCCATCTGAGTCAGGTTTGTTGAGAACA...CGGGGTCCTGAGATTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
CDS-3UTR TCA 90 bp AACCCCCGGCTCATCCAATCAATGTGCAATCAATTTCTACACCATGGCAGAGGTGGAAGCAGAGCTGTATaGCCGGCGGCCGGCGCCACG +
Preference number: 4 (lower is better)
Translates to: NPRLIQSMCNQFLHHGRGGSRAV*PAAGAT
Trigger: CGTGGCGCCGGCCGCCGGTCATACAGCTCTGCTTCC...ACCTCTGCCATGGTGTAGAAATTGATTGCACATTGATTGGATGAGCCGGGGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394970.6
CDS-3UTR GCA 90 bp CTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGCCCGGCCCACTGGGGACCCATTGGGTACCCAGATaGGGACAGTCTTGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: LSFGSEASFVCEPGPLGTHWVPR*GQSCLG
Trigger: CCCGAGACAAGACTGTCCGCATCTGGGTACCCAATG...GGTCCCCAGTGGGCCGGGCTCACACACAAATGATGCTTCAGACCCGAATGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp CCAGGGCTCCAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCGCGCCACGGTCTCCGTaGCCAGTTCCCCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PGLQYGCDSHRVQSPLFTAPRSP*PVPQAQ
Trigger: CTGGGCTTGGGGAACTGGGCACGGAGACCGTGGCGC...GGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTGGAGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394970.6
CDS-3UTR TCA 90 bp ACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCACCTGCAAATCCACCGAGCTAGAAGTTCACACAGGTaGCGGCATCCTTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TQVPWYKSLACHLQIHRARSSHR*RHPCGQ
Trigger: CTGGCCACAAGGATGCCGTCACCTGTGTGAACTTCT...AGCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp TACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCACCTGCAAATCCACCGAGCAGAAGTTCACACAGGTaGCGGCATCCTTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: YPSPMVQIPGLPPANPPSRSSHR*RHPCGQ
Trigger: CTGGCCACAAGGATGCCGTCACCTGTGTGAACTTCT...GCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp ATGAGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACAACGGTGGCCCTTAAAATaGCTTTCCAGCGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: MSENQGIVEPPPPEGEPQRWPLK*LSSEGS
Trigger: GGACCCCTCGCTGGAAAGGCATTTTAAGGGCCACCG...TTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp TGCAAAAATCCAGGGCTCCAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTGCCGGCAGCGGCAATaGACGTCCCACTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: CKNPGLQYGCDSHRVQSPCRQRQ*TSHWGG
Trigger: TCCACCCCAGTGGGACGTGCATTGCCGCTGCCGGCA...AGGGGACTGAACTCTGTGGGAATCACATCCATACTGGAGCCCTGGATTTTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp CCAGGGCTCCAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCAGCTGCGGTGGCCGTTaGGGCCCGTTCAGTTTCCGC +
Preference number: 4 (lower is better)
Translates to: PGLQYGCDSHRVQSPLFTSCGGR*GPFSFR
Trigger: GCGGAAACTGAACGGGCCGCAACGGCCACCGCAGCT...GGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTGGAGCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394970.6
CDS-3UTR CCA 90 bp CACCATGGCAGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAGCCATGGCGGGGCTaGCGGCGCCGAAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HHGRGRKSQSHVQMMSENQPWRG*RRRRQL
Trigger: CAGCTGCCTTCGGCGCCGCCAGCCCCGCCATGGCTG...ATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCTGCCATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp TCCTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGCCCGGCCCACTGGGGACAATGCACGTCCCACTaGGGTGGAAGTCCACATAGG +
Preference number: 4 (lower is better)
Translates to: SSHSGLKHHLCVSPAHWGQCTSH*GGSPHR
Trigger: CCTATGTGGACTTCCACCCCAGTGGGACGTGCATTG...TCCCCAGTGGGCCGGGCTCACACACAAATGATGCTTCAGACCCGAATGAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp CCAGGGCTCCAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCTGGAGCTGGCCAGTGTaGCTGGGGGCCTCGGCACTT +
Preference number: 4 (lower is better)
Translates to: PGLQYGCDSHRVQSPLFTWSWPV*LGASAL
Trigger: AAGTGCCGAGGCCCCCAGCCACACTGGCCAGCTCCA...GGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTGGAGCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp TCCCATGGTACAAATCCCTGGCCTGCCACCTGCAAATCCACCGAGCTCCTGATTGGAAGTCCACATAGGTaGCAAAGCCGCCATGCTCAC +
Preference number: 4 (lower is better)
Translates to: SHGTNPWPATCKSTELLIGSPHR*QSRHAH
Trigger: GTGAGCATGGCGGCTTTGTCACCTATGTGGACTTCC...AATCAGGAGCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp ATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGCTGCAGCAGCCGGTaGGTCCGCACGTCCCACACC +
Preference number: 4 (lower is better)
Translates to: IPTEFSPLYLPKSHGTNPCCSSR*VRTSHT
Trigger: GGTGTGGGACGTGCGGACTCACCGGCTGCTGCAGCA...GGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp ACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCACCTGCAAATCCACCGAGCTAGGACTGGCCATCACTaGAGAAGTGGACACTCCTCA +
Preference number: 4 (lower is better)
Translates to: TQVPWYKSLACHLQIHRARTGHH*RSGHSS
Trigger: TGAGGAGTGTCCACTTCTGCAGTGATGGCCAGTCCT...AGCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp ACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGGCCTTGCCGGCAGCGGCAATaGACGTCCCACTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: TEFSPLYLPKSHGTNPWPCRQRQ*TSHWGG
Trigger: TCCACCCCAGTGGGACGTGCATTGCCGCTGCCGGCA...AGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp CTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGCCCGGCCCACTGGGGACCAGAGAGCCCGTTCACTaGTGCACTGTGCAACTGATA +
Preference number: 4 (lower is better)
Translates to: LSFGSEASFVCEPGPLGTREPVH*CTVQLI
Trigger: TATCAGTTGCACAGTGCAGCAGTGAACGGGCTCTCT...GGTCCCCAGTGGGCCGGGCTCACACACAAATGATGCTTCAGACCCGAATGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp TACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCACCTGCAAATCCACCGAGCGTCAGTGTCAACCGCTaGTCCAGAATGGAGACTGTC +
Preference number: 4 (lower is better)
Translates to: YPSPMVQIPGLPPANPPSVSVNR*SRMETV
Trigger: GACAGTCTCCATTCTGGAGCAGCGGTTGACACTGAC...GCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp GTCCCATGGTACAAATCCCTGGCCTGCCACCTGCAAATCCACCGAGCTCCTGATTACAAATCCCTGGCCTaGCACCTGCAAATCCACCGA +
Preference number: 4 (lower is better)
Translates to: VPWYKSLACHLQIHRAPDYKSLA*HLQIHR
Trigger: TCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTA...ATCAGGAGCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp AGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAAGGCATCCAGCCATGGCGGGGCTaGCGGCGCCGAAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RGRKSQSHVQMMSENQGIQPWRG*RRRRQL
Trigger: CAGCTGCCTTCGGCGCCGCCAGCCCCGCCATGGCTG...GATGCCTTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp ACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCACCTGCAAATCCACCGAGCTGGACACTCCTCACTGTaGCTGTGTGTGCACGAAACA +
Preference number: 4 (lower is better)
Translates to: TQVPWYKSLACHLQIHRAGHSSL*LCVHET
Trigger: TGTTTCGTGCACACACAGCCACAGTGAGGAGTGTCC...AGCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp ACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCACCTGCAAATCCACCGAGCTCCATCACTGCAGAAGTaGACACTCCTCACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: TQVPWYKSLACHLQIHRAPSLQK*TLLTVA
Trigger: AGCCACAGTGAGGAGTGTCCACTTCTGCAGTGATGG...AGCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp TGCAAAAATCCAGGGCTCCAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTACACTCACGGGCTCCTaGGGCTGGCTCTGCACAGAC +
Preference number: 4 (lower is better)
Translates to: CKNPGLQYGCDSHRVQSPTLTGS*GWLCTD
Trigger: GTCTGTGCAGAGCCAGCCCCAGGAGCCCGTGAGTGT...AGGGGACTGAACTCTGTGGGAATCACATCCATACTGGAGCCCTGGATTTTTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS-3UTR CCA 90 bp GCCACAATCTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATACACTCACGGGCTCCTaGGGCTGGCTCTGCACAGAC +
Preference number: 4 (lower is better)
Translates to: ATISGPRRSRHFQVAPLHTLTGS*GWLCTD
Trigger: GTCTGTGCAGAGCCAGCCCCAGGAGCCCGTGAGTGT...ATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAGATTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
3UTR CAA 72 bp AAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTaGTGTGTGAGCCCGGCCCACTGGGGACCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: KMWSSHSGLKHH*CVSPAHWGPLA
Trigger: AGCCAGAGGTCCCCAGTGGGCCGGGCTCACACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp AGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCACCTGCGGAAGTCCACATAGGTaGCAAAGCCGCCATGCTCAC +
Preference number: 4 (lower is better)
Translates to: SPLYLPKSHGTNPWPATCGSPHR*QSRHAH
Trigger: GTGAGCATGGCGGCTTTGTCACCTATGTGGACTTCC...GCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp TACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCACCTGCAAATCCACCGAGCGCTCCAGTATGGATGTaGTTCCCACAGAGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: YPSPMVQIPGLPPANPPSAPVWM*FPQSSV
Trigger: GACTGAACTCTGTGGGAATCACATCCATACTGGAGC...GCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp GAGGGCAGAACTGCAAAAATCCAGGGCTCCAGTATGGATGTGATTCCCACAGAGTCACTGTGTTGTCCATaGCGGCAGCGGCAATGCACG +
Preference number: 4 (lower is better)
Translates to: EGRTAKIQGSSMDVIPTESLCCP*RQRQCT
Trigger: CGTGCATTGCCGCTGCCGGCATGGACAACACAGTGA...CTCTGTGGGAATCACATCCATACTGGAGCCCTGGATTTTTGCAGTTCTGCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp AGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCACCTGCAGCTGGCCCACAATGTaGTCCAGCGTGCTAGTCAGT +
Preference number: 4 (lower is better)
Translates to: SPLYLPKSHGTNPWPATCSWPTM*SSVLVS
Trigger: ACTGACTAGCACGCTGGAGCACATTGTGGGCCAGCT...GCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS-3UTR GCA 90 bp AACCCCCGGCTCATCCAATCAATGTGCAATCAATTTCTACACCATGGCAGAGGTCCCTGGCCTGCCACCTaGAAATCCACCGAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: NPRLIQSMCNQFLHHGRGPWPAT*KSTELL
Trigger: CAGGAGCTCGGTGGATTTGCAGGTGGCAGGCCAGGG...ACCTCTGCCATGGTGTAGAAATTGATTGCACATTGATTGGATGAGCCGGGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
CDS-3UTR CCA 90 bp AGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCACCTGCCAATGCACGTCCCACTaGGGTGGAAGTCCACATAGG +
Preference number: 4 (lower is better)
Translates to: SPLYLPKSHGTNPWPATCQCTSH*GGSPHR
Trigger: CCTATGTGGACTTCCACCCCAGTGGGACGTGCATTG...GCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp GATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCTGGAGCTGGCCAGTGTaGCTGGGGGCCTCGGCACTT +
Preference number: 4 (lower is better)
Translates to: DSHRVQSPLFTQVPWYKSWSWPV*LGASAL
Trigger: AAGTGCCGAGGCCCCCAGCCACACTGGCCAGCTCCA...GGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp GAGGGCAGAACTGCAAAAATCCAGGGCTCCAGTATGGATGTGATTCCCACAGAGGTGAGGACATCCAGCTaGCCCACAATGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: EGRTAKIQGSSMDVIPTEVRTSS*PTMCSS
Trigger: GCTGGAGCACATTGTGGGCCAGCTGGATGTCCTCAC...CTCTGTGGGAATCACATCCATACTGGAGCCCTGGATTTTTGCAGTTCTGCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS-3UTR CCA 90 bp ACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCACCTGCAAATCCACCGAGCTTTTACCCAAGTCCCATaGTACAAATCCCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TQVPWYKSLACHLQIHRAFTQVP*YKSLAC
Trigger: GCAGGCCAGGGATTTGTACCATGGGACTTGGGTAAA...AGCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp TCCTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGCCCGGCCCACTGGGGATTTACCCAAGTCCCATaGTACAAATCCCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SSHSGLKHHLCVSPAHWGFTQVP*YKSLAC
Trigger: GCAGGCCAGGGATTTGTACCATGGGACTTGGGTAAA...TCCCCAGTGGGCCGGGCTCACACACAAATGATGCTTCAGACCCGAATGAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp TCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACAATCTCAGGACCCACATTAAGCAAAATGTaGTCCTCTCATTCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SRHRGATSSRGGATISGPTLSKM*SSHSGL
Trigger: CAGACCCGAATGAGAGGACCACATTTTGCTTAATGT...GGGTCCTGAGATTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp TCTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAGAAGCGGTAGGCGCGTaGCTGCGGCTTCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: SQDPEGADIFKWLLYIKQEAVGA*LRLHVP
Trigger: TGGCACATGAAGCCGCAGTCACGCGCCTACCGCTTC...TTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp TCCTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGCCCGGCCCACTGGGGAAGGAATTTCTGGCGATaGGTTGCCCACACTTTGACT +
Preference number: 4 (lower is better)
Translates to: SSHSGLKHHLCVSPAHWGRNFWR*VAHTLT
Trigger: AGTCAAAGTGTGGGCAACTCATCGCCAGAAATTCCT...TCCCCAGTGGGCCGGGCTCACACACAAATGATGCTTCAGACCCGAATGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp AGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAAGGCATCCACTGGCAGACACGATaGGCCGCCCGTCGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RGRKSQSHVQMMSENQGIHWQTR*AARRGR
Trigger: TCTCCCCCGACGGGCGGCTCATCGTGTCTGCCAGTG...GATGCCTTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp ATTTTGAGATTCCTGTGCCCTCACTCACGCAAGGAGGAAGTCACCTGGCTCCAGATACTCCCCCGTTCTTaGAAAGGCAACAGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: ILRFLCPHSRKEEVTWLQILPRS*KGNSGG
Trigger: GCCACCACTGTTGCCTTTTCAAGAACGGGGGAGTAT...CTGGAGCCAGGTGACTTCCTCCTTGCGTGAGTGAGGGCACAGGAATCTCAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296484.7
CDS-3UTR TCA 90 bp ATGATGAGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCAGTGTTGCTCTCTGCATaGTTAGCTGCTGGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: MMSENQGIVEPPPPEGEPVLLSA*LAAGSP
Trigger: TGGAGAACCAGCAGCTAATCATGCAGAGAGCAACAC...TGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACTCATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp ACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGGCCTAGCATCATTTGTGTGTaGGCCCGGCCCACTGGGGAC +
Preference number: 4 (lower is better)
Translates to: TEFSPLYLPKSHGTNPWPSIICV*ARPTGD
Trigger: GTCCCCAGTGGGCCGGGCTCACACACAAATGATGCT...AGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp GAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCGACTGCGGCTTCATGTaGCAGACCATGAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: EFSPLYLPKSHGTNPWPADCGFM*QTMRHE
Trigger: CTCATGCCTCATGGTCTGGCACATGAAGCCGCAGTC...GGCAGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp ATGATGAGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCAGTGACAAAGCCGCCATaGTCACAATACGAGTGGACA +
Preference number: 4 (lower is better)
Translates to: MMSENQGIVEPPPPEGEPVTKPP*SQYEWT
Trigger: TGTCCACTCGTATTGTGAGCATGGCGGCTTTGTCAC...TGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACTCATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp AGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACAATCTCTCTGCATGATTAGCTaGTGGTTCTCCAGACACTGC +
Preference number: 4 (lower is better)
Translates to: SENQGIVEPPPPEGEPQSLCMIS*WFSRHC
Trigger: GCAGTGTCTGGAGAACCAGCAGCTAATCATGCAGAG...AGATTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp GAGGGCTTGTTCTCAACAAACCTGACTCAGATGGGCCCACTTTGGGCCTTTAGTAGCGCCTCAGCTTTTTaGCCGACGACTGGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: EGLFSTNLTQMGPLWAFSSASAF*PTTGSR
Trigger: TCTGCTTCCAGTCGTCGGGCAAAAAGCTGAGGCGCT...ACTAAAGGCCCAAAGTGGGCCCATCTGAGTCAGGTTTGTTGAGAACAAGCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394970.6
CDS-3UTR CCA 90 bp TCCTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGCCCGGCCCACTGGGGAGTAACTGCATCTCGGTaGCCCTTAAAATGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SSHSGLKHHLCVSPAHWGVTASR*PLKCLS
Trigger: GGAAAGGCATTTTAAGGGCCACCGAGATGCAGTTAC...TCCCCAGTGGGCCGGGCTCACACACAAATGATGCTTCAGACCCGAATGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp ACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCACCTGCAAATCCACCGAGCTACCCAGTTGATATGCTaGCTCAGGGAGAACAGGAAT +
Preference number: 4 (lower is better)
Translates to: TQVPWYKSLACHLQIHRATQLIC*LRENRN
Trigger: ATTCCTGTTCTCCCTGAGCCAGCATATCAACTGGGT...AGCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp TCCAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCGGCAACAGTGGTGGCTaGTCCCTGATGCCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: SSMDVIPTEFSPLYLPKSGNSGG*SLMPVE
Trigger: CTCCACGGGCATCAGGGACCAGCCACCACTGTTGCC...GGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp CACCATGGCAGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATGCTGGCCAGTGTGGCTaGGGGCCTCGGCACTTTCGT +
Preference number: 4 (lower is better)
Translates to: HHGRGRKSQSHVQMMSENAGQCG*GPRHFR
Trigger: ACGAAAGTGCCGAGGCCCCCAGCCACACTGGCCAGC...ATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCTGCCATGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp GTCCAAATGATGAGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGAGGGAAGTCCACTTCTaGCAGATTCCCCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: VQMMSENQGIVEPPPPEGREVHF*QIPHGA
Trigger: AGCTCCATGGGGAATCTGCCAGAAGTGGACTTCCCT...CCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACTCATCATTTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS-3UTR CCA 90 bp CACAATCTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAACTCCTGCCTCTGCCTaGGGGGACAGGGAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: HNLRTPKEQTFSSGSFTLTPASA*GDREVH
Trigger: GTGGACTTCCCTGTCCCCCCAGGCAGAGGCAGGAGT...TAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAGATTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS-3UTR CCA 90 bp GGCAGAACTGCAAAAATCCAGGGCTCCAGTATGGATGTGATTCCCACAGAGTTCGTGAGGACATCCAGCTaGCCCACAATGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GRTAKIQGSSMDVIPTEFVRTSS*PTMCSS
Trigger: GCTGGAGCACATTGTGGGCCAGCTGGATGTCCTCAC...GAACTCTGTGGGAATCACATCCATACTGGAGCCCTGGATTTTTGCAGTTCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS-3UTR CCA 90 bp TACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCACCTGCAAATCCACCGAGCTGCATGATTAGCTGCTaGTTCTCCAGACACTGCTTC +
Preference number: 4 (lower is better)
Translates to: YPSPMVQIPGLPPANPPSCMISC*FSRHCF
Trigger: GAAGCAGTGTCTGGAGAACCAGCAGCTAATCATGCA...GCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp AGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACAATCTAGGAATTTCTGGCGATaGGTTGCCCACACTTTGACT +
Preference number: 4 (lower is better)
Translates to: SENQGIVEPPPPEGEPQSRNFWR*VAHTLT
Trigger: AGTCAAAGTGTGGGCAACTCATCGCCAGAAATTCCT...AGATTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp GAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCCAGGATCTTCAGGGTTaGGTCACTGGAGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: EFSPLYLPKSHGTNPWPAQDLQG*VTGGCD
Trigger: ATCACAGCCTCCAGTGACTCAACCCTGAAGATCCTG...GGCAGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp AAAACCCCCGGCTCATCCAATCAATGTGCAATCAATTTCTACACCATGGCAGAGAGCATCATTTGTGTGTaGGCCCGGCCCACTGGGGAC +
Preference number: 4 (lower is better)
Translates to: KTPGSSNQCAINFYTMAESIICV*ARPTGD
Trigger: GTCCCCAGTGGGCCGGGCTCACACACAAATGATGCT...CTCTGCCATGGTGTAGAAATTGATTGCACATTGATTGGATGAGCCGGGGGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
CDS-3UTR TCA 90 bp GAGGGCTTGTTCTCAACAAACCTGACTCAGATGGGCCCACTTTGGGCCTTTAGTGTCACCTGGCTCCAGTaGACACGTGTGGAACAGAAA +
Preference number: 4 (lower is better)
Translates to: EGLFSTNLTQMGPLWAFSVTWLQ*TRVEQK
Trigger: TTTCTGTTCCACACGTGTTCACTGGAGCCAGGTGAC...ACTAAAGGCCCAAAGTGGGCCCATCTGAGTCAGGTTTGTTGAGAACAAGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
CDS-3UTR GCA 90 bp TGCAAAAATCCAGGGCTCCAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTCATTGGGTACCCAGATaGGGACAGTCTTGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: CKNPGLQYGCDSHRVQSPHWVPR*GQSCLG
Trigger: CCCGAGACAAGACTGTCCGCATCTGGGTACCCAATG...AGGGGACTGAACTCTGTGGGAATCACATCCATACTGGAGCCCTGGATTTTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp GAGGGCTTGTTCTCAACAAACCTGACTCAGATGGGCCCACTTTGGGCCTTTAGTAGGACTGGCCATCACTaGAGAAGTGGACACTCCTCA +
Preference number: 4 (lower is better)
Translates to: EGLFSTNLTQMGPLWAFSRTGHH*RSGHSS
Trigger: TGAGGAGTGTCCACTTCTGCAGTGATGGCCAGTCCT...ACTAAAGGCCCAAAGTGGGCCCATCTGAGTCAGGTTTGTTGAGAACAAGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
CDS-3UTR GCA 90 bp AACCCCCGGCTCATCCAATCAATGTGCAATCAATTTCTACACCATGGCAGAGGTTCACTGTGTTGTCCATaGCGGCAGCGGCAATGCACG +
Preference number: 4 (lower is better)
Translates to: NPRLIQSMCNQFLHHGRGSLCCP*RQRQCT
Trigger: CGTGCATTGCCGCTGCCGGCATGGACAACACAGTGA...ACCTCTGCCATGGTGTAGAAATTGATTGCACATTGATTGGATGAGCCGGGGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
CDS-3UTR GCA 90 bp GAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCCGAGCTCCTGATTCCTaGTCCCCTGATCATGGTGTT +
Preference number: 4 (lower is better)
Translates to: EFSPLYLPKSHGTNPWPARAPDS*SPDHGV
Trigger: AACACCATGATCAGGGGAGCAGGAATCAGGAGCTCG...GGCAGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp CAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGCCCGGCCGAGCTCCTGATTCCTaGTCCCCTGATCATGGTGTT +
Preference number: 4 (lower is better)
Translates to: QNVVLSFGSEASFVCEPGRAPDS*SPDHGV
Trigger: AACACCATGATCAGGGGAGCAGGAATCAGGAGCTCG...GCCGGGCTCACACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp AGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAAGGCATCGCTGGCCAGTGTGGCTaGGGGCCTCGGCACTTTCGT +
Preference number: 4 (lower is better)
Translates to: RGRKSQSHVQMMSENQGIAGQCG*GPRHFR
Trigger: ACGAAAGTGCCGAGGCCCCCAGCCACACTGGCCAGC...GATGCCTTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp AGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAAGGCATCTGGAGCTGGCCAGTGTaGCTGGGGGCCTCGGCACTT +
Preference number: 4 (lower is better)
Translates to: RGRKSQSHVQMMSENQGIWSWPV*LGASAL
Trigger: AAGTGCCGAGGCCCCCAGCCACACTGGCCAGCTCCA...GATGCCTTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp AAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAAGGCATCGTGGAGCCAACTCCTGCCTCTGCCTaGGGGGACAGGGAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: KSQSHVQMMSENQGIVEPTPASA*GDREVH
Trigger: GTGGACTTCCCTGTCCCCCCAGGCAGAGGCAGGAGT...TGGCTCCACGATGCCTTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS-3UTR CCA 90 bp ATGATGAGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCATGCATGATTAGCTGCTaGTTCTCCAGACACTGCTTC +
Preference number: 4 (lower is better)
Translates to: MMSENQGIVEPPPPEGEPCMISC*FSRHCF
Trigger: GAAGCAGTGTCTGGAGAACCAGCAGCTAATCATGCA...TGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACTCATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp TTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGCCCGGCCCACTaGGGACCTCTGGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: FTLSKMWSSHSGLKHHLCVSPAH*GPLAAR
Trigger: CCTGGCAGCCAGAGGTCCCCAGTGGGCCGGGCTCAC...ACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp AGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAAGGCATCGAAGCGGTAGGCGCGTaGCTGCGGCTTCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: RGRKSQSHVQMMSENQGIEAVGA*LRLHVP
Trigger: TGGCACATGAAGCCGCAGTCACGCGCCTACCGCTTC...GATGCCTTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp CTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAACACAGCGGACCCAGTTaGTATGCTGGCTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LRTPKEQTFSSGSFTLSKHSGPS*YAGSGR
Trigger: TCTCCCTGAGCCAGCATATCAACTGGGTCCGCTGTG...TTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp GAGGGCAGAACTGCAAAAATCCAGGGCTCCAGTATGGATGTGATTCCCACAGAGGCCTCGGCACTTTCGTaGCTTCTCCATGATCAACAA +
Preference number: 4 (lower is better)
Translates to: EGRTAKIQGSSMDVIPTEASALS*LLHDQQ
Trigger: TTGTTGATCATGGAGAAGTCACGAAAGTGCCGAGGC...CTCTGTGGGAATCACATCCATACTGGAGCCCTGGATTTTTGCAGTTCTGCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp CTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAATGGAGACTGTCTGAGTaGGGACATCCAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LRTPKEQTFSSGSFTLSKWRLSE*GHPAGP
Trigger: TGGGCCAGCTGGATGTCCTCACTCAGACAGTCTCCA...TTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS-3UTR GCA 90 bp ACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGGCCTCATTGGGTACCCAGATaGGGACAGTCTTGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: TEFSPLYLPKSHGTNPWPHWVPR*GQSCLG
Trigger: CCCGAGACAAGACTGTCCGCATCTGGGTACCCAATG...AGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp CTCCTTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTTGCCGGCAGCGGCAATaGACGTCCCACTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LLYIKQNVVLSFGSEASFCRQRQ*TSHWGG
Trigger: TCCACCCCAGTGGGACGTGCATTGCCGCTGCCGGCA...AAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp GCCACAATCTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATGTCAGTGTCAACCGCTaGTCCAGAATGGAGACTGTC +
Preference number: 4 (lower is better)
Translates to: ATISGPRRSRHFQVAPLHVSVNR*SRMETV
Trigger: GACAGTCTCCATTCTGGAGCAGCGGTTGACACTGAC...ATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAGATTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp TGCAAAAATCCAGGGCTCCAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTCGAGCTCCTGATTCCTaGTCCCCTGATCATGGTGTT +
Preference number: 4 (lower is better)
Translates to: CKNPGLQYGCDSHRVQSPRAPDS*SPDHGV
Trigger: AACACCATGATCAGGGGAGCAGGAATCAGGAGCTCG...AGGGGACTGAACTCTGTGGGAATCACATCCATACTGGAGCCCTGGATTTTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp ACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGGCCTGCTGTCACGAAGGACTaGCCATCACTGCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: TEFSPLYLPKSHGTNPWPAVTKD*PSLQKW
Trigger: CCACTTCTGCAGTGATGGCCAGTCCTTCGTGACAGC...AGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp GCCACAATCTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTTGAAAAGGCAACAGTaGTGGCTGGTCCCTGATGCC +
Preference number: 4 (lower is better)
Translates to: ATISGPRRSRHFQVAPLHLKRQQ*WLVPDA
Trigger: GGCATCAGGGACCAGCCACCACTGTTGCCTTTTCAA...ATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAGATTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp CATGGCAGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAAACGGGCTCCTGGGGCTaGCTCTGCACAGACTCCACA +
Preference number: 4 (lower is better)
Translates to: HGRGRKSQSHVQMMSENQTGSWG*LCTDST
Trigger: TGTGGAGTCTGTGCAGAGCCAGCCCCAGGAGCCCGT...TTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCTGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS-3UTR CCA 90 bp AGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCACCTGCGTGCAGATAGCAAGGTaGAGGGCAGAACTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: SPLYLPKSHGTNPWPATCVQIAR*RAELQK
Trigger: TTTTTGCAGTTCTGCCCTCCACCTTGCTATCTGCAC...GCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp TGCAAAAATCCAGGGCTCCAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTACCGCTGCTCCAGAATaGAGACTGTCAGATTCCCCA +
Preference number: 4 (lower is better)
Translates to: CKNPGLQYGCDSHRVQSPTAAPE*RLSDSP
Trigger: TGGGGAATCTGACAGTCTCCATTCTGGAGCAGCGGT...AGGGGACTGAACTCTGTGGGAATCACATCCATACTGGAGCCCTGGATTTTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394970.6
CDS-3UTR TCA 90 bp CAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCAGGAAGTCCACATAGGTaGCAAAGCCGCCATGCTCAC +
Preference number: 4 (lower is better)
Translates to: QYGCDSHRVQSPLFTQVPGSPHR*QSRHAH
Trigger: GTGAGCATGGCGGCTTTGTCACCTATGTGGACTTCC...TGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp ATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCAGTCACTGGAGGCTGTaGTCAGGTAGTTTCCCGACG +
Preference number: 4 (lower is better)
Translates to: IPTEFSPLYLPKSHGTNPSHWRL*SGSFPT
Trigger: CGTCGGGAAACTACCTGATCACAGCCTCCAGTGACT...GGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp CACAATCTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGTCACTGGAGGCTGTaGTCAGGTAGTTTCCCGACG +
Preference number: 4 (lower is better)
Translates to: HNLRTPKEQTFSSGSFTLSHWRL*SGSFPT
Trigger: CGTCGGGAAACTACCTGATCACAGCCTCCAGTGACT...TAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAGATTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp TTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTAGTCACTGGAGGCTGTaGTCAGGTAGTTTCCCGACG +
Preference number: 4 (lower is better)
Translates to: FPQSSVPFIYPSPMVQIPSHWRL*SGSFPT
Trigger: CGTCGGGAAACTACCTGATCACAGCCTCCAGTGACT...AGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp TGCAAAAATCCAGGGCTCCAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTGTGTTGCTCTCTGCATaGTTAGCTGCTGGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CKNPGLQYGCDSHRVQSPVLLSA*LAAGSP
Trigger: TGGAGAACCAGCAGCTAATCATGCAGAGAGCAACAC...AGGGGACTGAACTCTGTGGGAATCACATCCATACTGGAGCCCTGGATTTTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp CCAGGGCTCCAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCGCTCCAGTATGGATGTaGTTCCCACAGAGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: PGLQYGCDSHRVQSPLFTAPVWM*FPQSSV
Trigger: GACTGAACTCTGTGGGAATCACATCCATACTGGAGC...GGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTGGAGCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp ATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCGACTGCGGCTTCATGTaGCAGACCATGAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: IPTEFSPLYLPKSHGTNPDCGFM*QTMRHE
Trigger: CTCATGCCTCATGGTCTGGCACATGAAGCCGCAGTC...GGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp CCAGGGCTCCAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCGAGCCCGTTCACTGCTaGACTGTGCAACTGATAATG +
Preference number: 4 (lower is better)
Translates to: PGLQYGCDSHRVQSPLFTEPVHC*TVQLIM
Trigger: CATTATCAGTTGCACAGTGCAGCAGTGAACGGGCTC...GGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTGGAGCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp TGCAAAAATCCAGGGCTCCAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTCTCTGCATGATTAGCTaGTGGTTCTCCAGACACTGC +
Preference number: 4 (lower is better)
Translates to: CKNPGLQYGCDSHRVQSPLCMIS*WFSRHC
Trigger: GCAGTGTCTGGAGAACCAGCAGCTAATCATGCAGAG...AGGGGACTGAACTCTGTGGGAATCACATCCATACTGGAGCCCTGGATTTTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp CTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAAAAAAGGCAACAGTGGTaGCTGGTCCCTGATGCCCGT +
Preference number: 4 (lower is better)
Translates to: LRTPKEQTFSSGSFTLSKKRQQW*LVPDAR
Trigger: ACGGGCATCAGGGACCAGCCACCACTGTTGCCTTTT...TTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp CATGGCAGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAAGTGCTAGTCAGTGTCTaGGGCACACTCACGGGCTCC +
Preference number: 4 (lower is better)
Translates to: HGRGRKSQSHVQMMSENQVLVSV*GTLTGS
Trigger: GGAGCCCGTGAGTGTGCCCCAGACACTGACTAGCAC...TTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCTGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS-3UTR CCA 90 bp ATGATGAGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCAACATTAAGCAAAATGTaGTCCTCTCATTCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: MMSENQGIVEPPPPEGEPTLSKM*SSHSGL
Trigger: CAGACCCGAATGAGAGGACCACATTTTGCTTAATGT...TGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACTCATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp CCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTGGTCCTGTCAGATTCCCCATaGAGCTGGCCAGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PEGADIFKWLLYIKQNVVLSDSP*SWPVWL
Trigger: CAGCCACACTGGCCAGCTCCATGGGGAATCTGACAG...GACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394970.6
CDS-3UTR TCA 90 bp TCAGATTTAGAGAAAACCCCCGGCTCATCCAATCAATGTGCAATCAATTTCTACCATCCTTGTGGCCAGTaGAGCGGTAGGCGCGTGACT +
Preference number: 4 (lower is better)
Translates to: SDLEKTPGSSNQCAINFYHPCGQ*SGRRVT
Trigger: AGTCACGCGCCTACCGCTTCACTGGCCACAAGGATG...GTAGAAATTGATTGCACATTGATTGGATGAGCCGGGGGTTTTCTCTAAATCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
CDS-3UTR TCA 90 bp GTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATAGAAGTTCACACAGGTaGCGGCATCCTTGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: VIPTEFSPLYLPKSHGTNRSSHR*RHPCGQ
Trigger: CTGGCCACAAGGATGCCGTCACCTGTGTGAACTTCT...ATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp ATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGCACAGCGGACCCAGTTaGTATGCTGGCTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: IKQNVVLSFGSEASFVCEHSGPS*YAGSGR
Trigger: TCTCCCTGAGCCAGCATATCAACTGGGTCCGCTGTG...CTCACACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp ATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTCAGGATCTTCAGGGTTaGGTCACTGGAGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: MDVIPTEFSPLYLPKSHGQDLQG*VTGGCD
Trigger: ATCACAGCCTCCAGTGACTCAACCCTGAAGATCCTG...ACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp CATGGCAGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAATGGAGACTGTCTGAGTaGGGACATCCAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: HGRGRKSQSHVQMMSENQWRLSE*GHPAGP
Trigger: TGGGCCAGCTGGATGTCCTCACTCAGACAGTCTCCA...TTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCTGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS-3UTR TCA 90 bp ATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCAGAATGGAGACTGTCTaGGTGAGGACATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: IPTEFSPLYLPKSHGTNPRMETV*VRTSSW
Trigger: CCAGCTGGATGTCCTCACTCAGACAGTCTCCATTCT...GGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS-3UTR TCA 90 bp ATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCGCCACTCGTTCCGCCTaGGAAATTAAAAGACCCAGG +
Preference number: 4 (lower is better)
Translates to: IPTEFSPLYLPKSHGTNPATRSA*EIKRPR
Trigger: CCTGGGTCTTTTAATTTCTCAGGCGGAACGAGTGGC...GGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394970.6
CDS-3UTR GCA 90 bp AACCCCCGGCTCATCCAATCAATGTGCAATCAATTTCTACACCATGGCAGAGGTGAGCCACTGGCCAGCTaGTTTGTGTTGATACTGAAG +
Preference number: 4 (lower is better)
Translates to: NPRLIQSMCNQFLHHGRGEPLAS*FVLILK
Trigger: CTTCAGTATCAACACAAAGCAGCTGGCCAGTGGCTC...ACCTCTGCCATGGTGTAGAAATTGATTGCACATTGATTGGATGAGCCGGGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
CDS-3UTR GCA 90 bp AAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAAGGCATCGTGGAGCCAGACTGCGGCTTCATGTaGCAGACCATGAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: KSQSHVQMMSENQGIVEPDCGFM*QTMRHE
Trigger: CTCATGCCTCATGGTCTGGCACATGAAGCCGCAGTC...TGGCTCCACGATGCCTTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp GAGGGCAGAACTGCAAAAATCCAGGGCTCCAGTATGGATGTGATTCCCACAGAGTTTCTGGCGATGAGTTaGCCACACTTTGACTGTCTT +
Preference number: 4 (lower is better)
Translates to: EGRTAKIQGSSMDVIPTEFLAMS*PHFDCL
Trigger: AAGACAGTCAAAGTGTGGGCAACTCATCGCCAGAAA...CTCTGTGGGAATCACATCCATACTGGAGCCCTGGATTTTTGCAGTTCTGCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp ACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGGCCTGTGACAAAGCCGCCATaGTCACAATACGAGTGGACA +
Preference number: 4 (lower is better)
Translates to: TEFSPLYLPKSHGTNPWPVTKPP*SQYEWT
Trigger: TGTCCACTCGTATTGTGAGCATGGCGGCTTTGTCAC...AGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp GTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATAGCTGGCCCACAATGTaGTCCAGCGTGCTAGTCAGT +
Preference number: 4 (lower is better)
Translates to: VIPTEFSPLYLPKSHGTNSWPTM*SSVLVS
Trigger: ACTGACTAGCACGCTGGAGCACATTGTGGGCCAGCT...ATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS-3UTR GCA 90 bp GATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCTACAAATCCCTGGCCTaGCACCTGCAAATCCACCGA +
Preference number: 4 (lower is better)
Translates to: DSHRVQSPLFTQVPWYKSYKSLA*HLQIHR
Trigger: TCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTA...GGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp ATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTGGACACTCCTCACTGTaGCTGTGTGTGCACGAAACA +
Preference number: 4 (lower is better)
Translates to: MDVIPTEFSPLYLPKSHGGHSSL*LCVHET
Trigger: TGTTTCGTGCACACACAGCCACAGTGAGGAGTGTCC...ACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp CACAATCTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTACCATCACTGCAGAAGTaGACACTCCTCACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: HNLRTPKEQTFSSGSFTLPSLQK*TLLTVA
Trigger: AGCCACAGTGAGGAGTGTCCACTTCTGCAGTGATGG...TAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAGATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp CTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAATGCTCACAATACGAGTaGACACATTCCCGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LRTPKEQTFSSGSFTLSKCSQYE*THSRLL
Trigger: GAGCAGCCGGGAATGTGTCCACTCGTATTGTGAGCA...TTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp ATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGCTCACAATACGAGTaGACACATTCCCGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: IPTEFSPLYLPKSHGTNPCSQYE*THSRLL
Trigger: GAGCAGCCGGGAATGTGTCCACTCGTATTGTGAGCA...GGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp TGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAAAAAAGGCAACAGTGGTaGCTGGTCCCTGATGCCCGT +
Preference number: 4 (lower is better)
Translates to: CDSHRVQSPLFTQVPWYKKRQQW*LVPDAR
Trigger: ACGGGCATCAGGGACCAGCCACCACTGTTGCCTTTT...TTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp TCCAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCTTGAAAAGGCAACAGTaGTGGCTGGTCCCTGATGCC +
Preference number: 4 (lower is better)
Translates to: SSMDVIPTEFSPLYLPKSLKRQQ*WLVPDA
Trigger: GGCATCAGGGACCAGCCACCACTGTTGCCTTTTCAA...GGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp CACAATCTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGGGAAGTCCACTTCTaGCAGATTCCCCATGGAGCT +
Preference number: 4 (lower is better)
Translates to: HNLRTPKEQTFSSGSFTLREVHF*QIPHGA
Trigger: AGCTCCATGGGGAATCTGCCAGAAGTGGACTTCCCT...TAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAGATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS-3UTR CCA 90 bp TTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTACGGGCTCCTGGGGCTaGCTCTGCACAGACTCCACA +
Preference number: 4 (lower is better)
Translates to: FTLSKMWSSHSGLKHHLCTGSWG*LCTDST
Trigger: TGTGGAGTCTGTGCAGAGCCAGCCCCAGGAGCCCGT...ACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS-3UTR CCA 90 bp TCAGATTTAGAGAAAACCCCCGGCTCATCCAATCAATGTGCAATCAATTTCTACGTGCTAGTCAGTGTCTaGGGCACACTCACGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SDLEKTPGSSNQCAINFYVLVSV*GTLTGS
Trigger: GGAGCCCGTGAGTGTGCCCCAGACACTGACTAGCAC...GTAGAAATTGATTGCACATTGATTGGATGAGCCGGGGGTTTTCTCTAAATCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296484.7
CDS-3UTR CCA 90 bp CTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAACATGGTACAAATCCCTaGCCTGCCACCTGCAAATCC +
Preference number: 4 (lower is better)
Translates to: LRTPKEQTFSSGSFTLSKHGTNP*PATCKS
Trigger: GGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATG...TTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp ATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCCATGGTACAAATCCCTaGCCTGCCACCTGCAAATCC +
Preference number: 4 (lower is better)
Translates to: IPTEFSPLYLPKSHGTNPHGTNP*PATCKS
Trigger: GGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATG...GGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp TTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTAAAATCAAGGCATCGTaGAGCCACCTCCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: FPQSSVPFIYPSPMVQIPKIKAS*SHLLQR
Trigger: CCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTT...AGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp CTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAAAAAATCAAGGCATCGTaGAGCCACCTCCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LRTPKEQTFSSGSFTLSKKIKAS*SHLLQR
Trigger: CCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTT...TTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp CTCCTTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTCACAGCGGACCCAGTTaGTATGCTGGCTCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: LLYIKQNVVLSFGSEASFHSGPS*YAGSGR
Trigger: TCTCCCTGAGCCAGCATATCAACTGGGTCCGCTGTG...AAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp CAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCAGCCTCGGCACTTTCGTaGCTTCTCCATGATCAACAA +
Preference number: 4 (lower is better)
Translates to: QYGCDSHRVQSPLFTQVPASALS*LLHDQQ
Trigger: TTGTTGATCATGGAGAAGTCACGAAAGTGCCGAGGC...TGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp CACAATCTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAGCCTCGGCACTTTCGTaGCTTCTCCATGATCAACAA +
Preference number: 4 (lower is better)
Translates to: HNLRTPKEQTFSSGSFTLASALS*LLHDQQ
Trigger: TTGTTGATCATGGAGAAGTCACGAAAGTGCCGAGGC...TAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAGATTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp TCTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAGCTCCAGTATGGATGTaGTTCCCACAGAGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: SQDPEGADIFKWLLYIKQAPVWM*FPQSSV
Trigger: GACTGAACTCTGTGGGAATCACATCCATACTGGAGC...TTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp CTCCTTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTCGGTGGCCCTTAAAATaGCTTTCCAGCGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LLYIKQNVVLSFGSEASFRWPLK*LSSEGS
Trigger: GGACCCCTCGCTGGAAAGGCATTTTAAGGGCCACCG...AAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp ACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCGGTGGCCCTTAAAATaGCTTTCCAGCGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TFSSGSFTLSKMWSSHSGRWPLK*LSSEGS
Trigger: GGACCCCTCGCTGGAAAGGCATTTTAAGGGCCACCG...ACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp CAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCAGTCCACACAGGTAACTaGATCTCGGTGGCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: QYGCDSHRVQSPLFTQVPVHTGN*ISVALK
Trigger: TTTAAGGGCCACCGAGATGCAGTTACCTGTGTGGAC...TGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp AGAAAACCCCCGGCTCATCCAATCAATGTGCAATCAATTTCTACACCATGGCAGGTCCACACAGGTAACTaGATCTCGGTGGCCCTTAAA +
Preference number: 4 (lower is better)
Translates to: RKPPAHPINVQSISTPWQVHTGN*ISVALK
Trigger: TTTAAGGGCCACCGAGATGCAGTTACCTGTGTGGAC...CTGCCATGGTGTAGAAATTGATTGCACATTGATTGGATGAGCCGGGGGTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
CDS-3UTR GCA 90 bp CAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCAGAGCCACTGGCCAGCTaGTTTGTGTTGATACTGAAG +
Preference number: 4 (lower is better)
Translates to: QYGCDSHRVQSPLFTQVPEPLAS*FVLILK
Trigger: CTTCAGTATCAACACAAAGCAGCTGGCCAGTGGCTC...TGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp CTCCTTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTTCACTGTGTTGTCCATaGCGGCAGCGGCAATGCACG +
Preference number: 4 (lower is better)
Translates to: LLYIKQNVVLSFGSEASFSLCCP*RQRQCT
Trigger: CGTGCATTGCCGCTGCCGGCATGGACAACACAGTGA...AAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp AGAAAACCCCCGGCTCATCCAATCAATGTGCAATCAATTTCTACACCATGGCAGGAGCCCGTTCACTGCTaGACTGTGCAACTGATAATG +
Preference number: 4 (lower is better)
Translates to: RKPPAHPINVQSISTPWQEPVHC*TVQLIM
Trigger: CATTATCAGTTGCACAGTGCAGCAGTGAACGGGCTC...CTGCCATGGTGTAGAAATTGATTGCACATTGATTGGATGAGCCGGGGGTTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
CDS-3UTR GCA 90 bp CAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCAGAGCCCGTTCACTGCTaGACTGTGCAACTGATAATG +
Preference number: 4 (lower is better)
Translates to: QYGCDSHRVQSPLFTQVPEPVHC*TVQLIM
Trigger: CATTATCAGTTGCACAGTGCAGCAGTGAACGGGCTC...TGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp CTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAAAGAGAGCCCGTTCACTaGTGCACTGTGCAACTGATA +
Preference number: 4 (lower is better)
Translates to: LRTPKEQTFSSGSFTLSKREPVH*CTVQLI
Trigger: TATCAGTTGCACAGTGCAGCAGTGAACGGGCTCTCT...TTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp ACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGGCCTCATGGTGTTGCTCTCTaGATGATTAGCTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: TEFSPLYLPKSHGTNPWPHGVAL*MISCWF
Trigger: GAACCAGCAGCTAATCATGCAGAGAGCAACACCATG...AGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp CACCATGGCAGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATTACAAATCCCTGGCCTaGCACCTGCAAATCCACCGA +
Preference number: 4 (lower is better)
Translates to: HHGRGRKSQSHVQMMSENYKSLA*HLQIHR
Trigger: TCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTA...ATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCTGCCATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp GGCAGAACTGCAAAAATCCAGGGCTCCAGTATGGATGTGATTCCCACAGAGTTCAGCATAAGCCACTCCTaGAACAAGTGCAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: GRTAKIQGSSMDVIPTEFSISHS*NKCNEV
Trigger: GACTTCATTGCACTTGTTGCAGGAGTGGCTTATGCT...GAACTCTGTGGGAATCACATCCATACTGGAGCCCTGGATTTTTGCAGTTCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296484.7
CDS-3UTR CCA 90 bp AGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAAGGCATCCAATGCACGTCCCACTaGGGTGGAAGTCCACATAGG +
Preference number: 4 (lower is better)
Translates to: RGRKSQSHVQMMSENQGIQCTSH*GGSPHR
Trigger: CCTATGTGGACTTCCACCCCAGTGGGACGTGCATTG...GATGCCTTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp TTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTCTGGCAGATTCCCCATaGAGCTGGCCAGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FTLSKMWSSHSGLKHHLCLADSP*SWPVWL
Trigger: CAGCCACACTGGCCAGCTCCATGGGGAATCTGCCAG...ACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS-3UTR CCA 90 bp TCTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAATTTACCCAAGTCCCATaGTACAAATCCCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SQDPEGADIFKWLLYIKQFTQVP*YKSLAC
Trigger: GCAGGCCAGGGATTTGTACCATGGGACTTGGGTAAA...TTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp TCCAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCTTTTTGCCCGACGACTaGAAGCAGAGCTGTATGACC +
Preference number: 4 (lower is better)
Translates to: SSMDVIPTEFSPLYLPKSFLPDD*KQSCMT
Trigger: GGTCATACAGCTCTGCTTCCAGTCGTCGGGCAAAAA...GGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394970.6
CDS-3UTR TCA 90 bp CCAGGGCTCCAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCTGTCCAAATGATGAGTaGAAATCAAGGCATCGTGGA +
Preference number: 4 (lower is better)
Translates to: PGLQYGCDSHRVQSPLFTCPNDE*KSRHRG
Trigger: TCCACGATGCCTTGATTTTCACTCATCATTTGGACA...GGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTGGAGCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp ACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGGCCTTTTCTGGCGATGAGTTaGCCACACTTTGACTGTCTT +
Preference number: 4 (lower is better)
Translates to: TEFSPLYLPKSHGTNPWPFLAMS*PHFDCL
Trigger: AAGACAGTCAAAGTGTGGGCAACTCATCGCCAGAAA...AGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp CACCATGGCAGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATAGAGAGCCCGTTCACTaGTGCACTGTGCAACTGATA +
Preference number: 4 (lower is better)
Translates to: HHGRGRKSQSHVQMMSENREPVH*CTVQLI
Trigger: TATCAGTTGCACAGTGCAGCAGTGAACGGGCTCTCT...ATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCTGCCATGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp CATGGCAGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAAGTCAGTGTCAACCGCTaGTCCAGAATGGAGACTGTC +
Preference number: 4 (lower is better)
Translates to: HGRGRKSQSHVQMMSENQVSVNR*SRMETV
Trigger: GACAGTCTCCATTCTGGAGCAGCGGTTGACACTGAC...TTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCTGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp TCTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAACATGGTGTTGCTCTCTaGATGATTAGCTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SQDPEGADIFKWLLYIKQHGVAL*MISCWF
Trigger: GAACCAGCAGCTAATCATGCAGAGAGCAACACCATG...TTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp CACAATCTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTACATGGTGTTGCTCTCTaGATGATTAGCTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: HNLRTPKEQTFSSGSFTLHGVAL*MISCWF
Trigger: GAACCAGCAGCTAATCATGCAGAGAGCAACACCATG...TAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAGATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp CAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCAATTTTGAGATTCCTGTaGCCTCACTCACGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: QYGCDSHRVQSPLFTQVPILRFL*PHSRKE
Trigger: CTCCTTGCGTGAGTGAGGGCACAGGAATCTCAAAAT...TGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296484.7
CDS-3UTR CCA 90 bp ATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTGTAACTGCATCTCGGTaGCCCTTAAAATGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: MDVIPTEFSPLYLPKSHGVTASR*PLKCLS
Trigger: GGAAAGGCATTTTAAGGGCCACCGAGATGCAGTTAC...ACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp CATGGCAGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAAGGACACTCCTCACTGTaGCTGTGTGTGCACGAAACA +
Preference number: 4 (lower is better)
Translates to: HGRGRKSQSHVQMMSENQGHSSL*LCVHET
Trigger: TGTTTCGTGCACACACAGCCACAGTGAGGAGTGTCC...TTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCTGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp GAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTGGTCCTCTCATGCTGTCACGAAGGACTaGCCATCACTGCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: EQTFSSGSFTLSKMWSSHAVTKD*PSLQKW
Trigger: CCACTTCTGCAGTGATGGCCAGTCCTTCGTGACAGC...ATGAGAGGACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp CTCCTTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGCTGTCACGAAGGACTaGCCATCACTGCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LLYIKQNVVLSFGSEASFAVTKD*PSLQKW
Trigger: CCACTTCTGCAGTGATGGCCAGTCCTTCGTGACAGC...AAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp ATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACCCAGTTGATATGCTaGCTCAGGGAGAACAGGAAT +
Preference number: 4 (lower is better)
Translates to: MDVIPTEFSPLYLPKSHGTQLIC*LRENRN
Trigger: ATTCCTGTTCTCCCTGAGCCAGCATATCAACTGGGT...ACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp CATGGCAGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAATGCTCACAATACGAGTaGACACATTCCCGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: HGRGRKSQSHVQMMSENQCSQYE*THSRLL
Trigger: GAGCAGCCGGGAATGTGTCCACTCGTATTGTGAGCA...TTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCTGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp ATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGTTGAAAAGGCAACAGTaGTGGCTGGTCCCTGATGCC +
Preference number: 4 (lower is better)
Translates to: IKQNVVLSFGSEASFVCELKRQQ*WLVPDA
Trigger: GGCATCAGGGACCAGCCACCACTGTTGCCTTTTCAA...CTCACACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp TCCAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCGTGCAGATAGCAAGGTaGAGGGCAGAACTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: SSMDVIPTEFSPLYLPKSVQIAR*RAELQK
Trigger: TTTTTGCAGTTCTGCCCTCCACCTTGCTATCTGCAC...GGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp ACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTGAGTTGCCCACACTTTaGCTGTCTTGTCGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TFSSGSFTLSKMWSSHSGELPTL*LSCRQR
Trigger: CCTCTGACGACAAGACAGTCAAAGTGTGGGCAACTC...ACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp CTCCTTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGAGTTGCCCACACTTTaGCTGTCTTGTCGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LLYIKQNVVLSFGSEASFELPTL*LSCRQR
Trigger: CCTCTGACGACAAGACAGTCAAAGTGTGGGCAACTC...AAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp ACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCAGGATCTTCAGGGTTaGGTCACTGGAGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: TFSSGSFTLSKMWSSHSGQDLQG*VTGGCD
Trigger: ATCACAGCCTCCAGTGACTCAACCCTGAAGATCCTG...ACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp GAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTGGTCCTCTCATATACTCCCCCGTTCTTaGAAAGGCAACAGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: EQTFSSGSFTLSKMWSSHILPRS*KGNSGG
Trigger: GCCACCACTGTTGCCTTTTCAAGAACGGGGGAGTAT...ATGAGAGGACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp ACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTATACTCCCCCGTTCTTaGAAAGGCAACAGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: TFSSGSFTLSKMWSSHSGILPRS*KGNSGG
Trigger: GCCACCACTGTTGCCTTTTCAAGAACGGGGGAGTAT...ACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp CATGGCAGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAAGTGTTGCTCTCTGCATaGTTAGCTGCTGGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HGRGRKSQSHVQMMSENQVLLSA*LAAGSP
Trigger: TGGAGAACCAGCAGCTAATCATGCAGAGAGCAACAC...TTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCTGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp ACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTAAGCCACCACCCACTTaGGAGGGCTTGTTCTCAACA +
Preference number: 4 (lower is better)
Translates to: TFSSGSFTLSKMWSSHSGKPPPT*EGLFST
Trigger: TGTTGAGAACAAGCCCTCTCAAGTGGGTGGTGGCTT...ACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
CDS-3UTR CCA 90 bp GAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTGGTCCTCTCATCCATCACTGCAGAAGTaGACACTCCTCACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: EQTFSSGSFTLSKMWSSHPSLQK*TLLTVA
Trigger: AGCCACAGTGAGGAGTGTCCACTTCTGCAGTGATGG...ATGAGAGGACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp TTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTAAAAGGCAACAGTGGTaGCTGGTCCCTGATGCCCGT +
Preference number: 4 (lower is better)
Translates to: FTLSKMWSSHSGLKHHLCKRQQW*LVPDAR
Trigger: ACGGGCATCAGGGACCAGCCACCACTGTTGCCTTTT...ACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp CCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTGGTCTGCATGATTAGCTGCTaGTTCTCCAGACACTGCTTC +
Preference number: 4 (lower is better)
Translates to: PEGADIFKWLLYIKQNVVCMISC*FSRHCF
Trigger: GAAGCAGTGTCTGGAGAACCAGCAGCTAATCATGCA...GACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp CTCCTTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTCATGGTACAAATCCCTaGCCTGCCACCTGCAAATCC +
Preference number: 4 (lower is better)
Translates to: LLYIKQNVVLSFGSEASFHGTNP*PATCKS
Trigger: GGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATG...AAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp ACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGGCCTACATTAAGCAAAATGTaGTCCTCTCATTCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: TEFSPLYLPKSHGTNPWPTLSKM*SSHSGL
Trigger: CAGACCCGAATGAGAGGACCACATTTTGCTTAATGT...AGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp CTCCTTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTAAAATCAAGGCATCGTaGAGCCACCTCCTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LLYIKQNVVLSFGSEASFKIKAS*SHLLQR
Trigger: CCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTT...AAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
3UTR CAA 72 bp ACTCCTGCAACAAGTGCAATGAAGTCAGGTTTAATTTaGAGATTCCTGTGCCCTCACTCACGCAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: TPATSAMKSGLI*RFLCPHSRKEE
Trigger: TTCCTCCTTGCGTGAGTGAGGGCACAGGAATCTCAAAATTAAACCTGACTTCATTGCACTTGTTGCAGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296484.7
CDS-3UTR TCA 90 bp TTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTAAGCCACCACCCACTTaGGAGGGCTTGTTCTCAACA +
Preference number: 4 (lower is better)
Translates to: FTLSKMWSSHSGLKHHLCKPPPT*EGLFST
Trigger: TGTTGAGAACAAGCCCTCTCAAGTGGGTGGTGGCTT...ACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
CDS-3UTR TCA 90 bp TTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTGTCACCTGGCTCCAGTaGACACGTGTGGAACAGAAA +
Preference number: 4 (lower is better)
Translates to: FTLSKMWSSHSGLKHHLCVTWLQ*TRVEQK
Trigger: TTTCTGTTCCACACGTGTTCACTGGAGCCAGGTGAC...ACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
CDS-3UTR GCA 90 bp GAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTGGTCCTCTCATGAGCCACTGGCCAGCTaGTTTGTGTTGATACTGAAG +
Preference number: 4 (lower is better)
Translates to: EQTFSSGSFTLSKMWSSHEPLAS*FVLILK
Trigger: CTTCAGTATCAACACAAAGCAGCTGGCCAGTGGCTC...ATGAGAGGACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp GAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTGGTCCTCTCATCTCTGCATGATTAGCTaGTGGTTCTCCAGACACTGC +
Preference number: 4 (lower is better)
Translates to: EQTFSSGSFTLSKMWSSHLCMIS*WFSRHC
Trigger: GCAGTGTCTGGAGAACCAGCAGCTAATCATGCAGAG...ATGAGAGGACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp AGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAAGGCATCACCCAGTTGATATGCTaGCTCAGGGAGAACAGGAAT +
Preference number: 4 (lower is better)
Translates to: RGRKSQSHVQMMSENQGITQLIC*LRENRN
Trigger: ATTCCTGTTCTCCCTGAGCCAGCATATCAACTGGGT...GATGCCTTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp TCAGATTTAGAGAAAACCCCCGGCTCATCCAATCAATGTGCAATCAATTTCTACTGTTCTCAACAAACCTaGCTCAGATGGGCCCACTTT +
Preference number: 4 (lower is better)
Translates to: SDLEKTPGSSNQCAINFYCSQQT*LRWAHF
Trigger: AAAGTGGGCCCATCTGAGTCAGGTTTGTTGAGAACA...GTAGAAATTGATTGCACATTGATTGGATGAGCCGGGGGTTTTCTCTAAATCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
CDS-3UTR GCA 90 bp TTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGACAAAGCCGCCATaGTCACAATACGAGTGGACA +
Preference number: 4 (lower is better)
Translates to: FTLSKMWSSHSGLKHHLCVTKPP*SQYEWT
Trigger: TGTCCACTCGTATTGTGAGCATGGCGGCTTTGTCAC...ACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp ATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGTGTCCAAATGATGAGTaGAAATCAAGGCATCGTGGA +
Preference number: 4 (lower is better)
Translates to: IKQNVVLSFGSEASFVCECPNDE*KSRHRG
Trigger: TCCACGATGCCTTGATTTTCACTCATCATTTGGACA...CTCACACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp TTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGCAGATAGCAAGGTaGAGGGCAGAACTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: FTLSKMWSSHSGLKHHLCVQIAR*RAELQK
Trigger: TTTTTGCAGTTCTGCCCTCCACCTTGCTATCTGCAC...ACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp TCTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAGCAGACATTTTCAAGTaGCTCCTTTACATTAAGCAA +
Preference number: 4 (lower is better)
Translates to: SQDPEGADIFKWLLYIKQADIFK*LLYIKQ
Trigger: TTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGC...TTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp TTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTTTTCTGGCGATGAGTTaGCCACACTTTGACTGTCTT +
Preference number: 4 (lower is better)
Translates to: FTLSKMWSSHSGLKHHLCFLAMS*PHFDCL
Trigger: AAGACAGTCAAAGTGTGGGCAACTCATCGCCAGAAA...ACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp CACCATGGCAGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATGCAGACATTTTCAAGTaGCTCCTTTACATTAAGCAA +
Preference number: 4 (lower is better)
Translates to: HHGRGRKSQSHVQMMSENADIFK*LLYIKQ
Trigger: TTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGC...ATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCTGCCATGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CCA 90 bp CCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTGGTCGCAGACATTTTCAAGTaGCTCCTTTACATTAAGCAA +
Preference number: 4 (lower is better)
Translates to: PEGADIFKWLLYIKQNVVADIFK*LLYIKQ
Trigger: TTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGC...GACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR TCA 90 bp TTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTTGTCCAAATGATGAGTaGAAATCAAGGCATCGTGGA +
Preference number: 4 (lower is better)
Translates to: FTLSKMWSSHSGLKHHLCCPNDE*KSRHRG
Trigger: TCCACGATGCCTTGATTTTCACTCATCATTTGGACA...ACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR GCA 90 bp GAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTGGTCCTCTCATCACTCCTGCAACAAGTaGAATGAAGTCAGGTTTAAT +
Preference number: 4 (lower is better)
Translates to: EQTFSSGSFTLSKMWSSHHSCNK*NEVRFN
Trigger: ATTAAACCTGACTTCATTGCACTTGTTGCAGGAGTG...ATGAGAGGACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296484.7
CDS GCA 90 bp CTGGAAGCAGAGCTGTATGACCGGCGGCCGGCGCCACGGTCTCCGTaGCCAGTTCCCCAAGCCCAGACAACCCACAGACAGCGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: LEAELYDRRPAPRSP*PVPQAQTTHRQRSQ
Trigger: TTGGCTGCGCTGTCTGTGGGTTGTCTGGGCTTGGGGAACTGGGCACGGAGACCGTGGCGCCGGCCGCCGGTCATACAGCTCTGCTTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394970.6
CDS TCA 90 bp AGAAGCGCCTCAGCTTTTTGCCCGACGACTGGAAGCAGAGCTGTATaGCCGGCGGCCGGCGCCACGGTCTCCGTGCCCAGTTCCCCAAGC +
Preference number: 5 (lower is better)
Translates to: RSASAFCPTTGSRAV*PAAGATVSVPSSPS
Trigger: GCTTGGGGAACTGGGCACGGAGACCGTGGCGCCGGCCGCCGGTCATACAGCTCTGCTTCCAGTCGTCGGGCAAAAAGCTGAGGCGCTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394970.6
CDS CCA 90 bp TGCTCCAGCGTGCTAGTCAGTGTCTGGGGCACACTCACGGGCTCCTaGGGCTGGCTCTGCACAGACTCCACACTCCTGCCTCTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: CSSVLVSVWGTLTGS*GWLCTDSTLLPLPG
Trigger: CCCAGGCAGAGGCAGGAGTGTGGAGTCTGTGCAGAGCCAGCCCCAGGAGCCCGTGAGTGTGCCCCAGACACTGACTAGCACGCTGGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS GCA 90 bp GCAGCCGGTGAGTCCGCACGTCCCACACCTTCACTGTGTTGTCCATaGCGGCAGCGGCAATGCACGTCCCACTGGGGTGGAAGTCCACAT +
Preference number: 5 (lower is better)
Translates to: AAGESARPTPSLCCP*RQRQCTSHWGGSPH
Trigger: ATGTGGACTTCCACCCCAGTGGGACGTGCATTGCCGCTGCCGGCATGGACAACACAGTGAAGGTGTGGGACGTGCGGACTCACCGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp AAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACAATCTCAGGACCCCGGCACAGCGGACCCAGTaGATATGCTGGCTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: KASWSHLLQRGSHNLRTPAQRTQ*ICWLRE
Trigger: CTCCCTGAGCCAGCATATCAACTGGGTCCGCTGTGC...CGGGGTCCTGAGATTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS CCA 90 bp CCACCGCAATTAAAGGAGAAGCGCCTCAGCTTTTTGCCCGACGACTaGAAGCAGAGCTGTATGACCGGCGGCCGGCGCCACGGTCTCCGT +
Preference number: 5 (lower is better)
Translates to: PPQLKEKRLSFLPDD*KQSCMTGGRRHGLR
Trigger: ACGGAGACCGTGGCGCCGGCCGCCGGTCATACAGCTCTGCTTCCAGTCGTCGGGCAAAAAGCTGAGGCGCTTCTCCTTTAATTGCGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394970.6
CDS-3UTR CAA 90 bp TACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCACCTGCAAATCCACCGAGCCCGTCGGGGGAGAACTaGGCACAGCGGACCCAGTTG +
Preference number: 5 (lower is better)
Translates to: YPSPMVQIPGLPPANPPSPSGEN*AQRTQL
Trigger: CAACTGGGTCCGCTGTGCCAAGTTCTCCCCCGACGG...GCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS GCA 90 bp ATACTGAAGTCCACACAGGTAACTGCATCTCGGTGGCCCTTAAAATaGCTTTCCAGCGAGGGGTCCTCCGCGCAGGGCGCAGCCATGGCG +
Preference number: 5 (lower is better)
Translates to: ILKSTQVTASRWPLK*LSSEGSSAQGAAMA
Trigger: CGCCATGGCTGCGCCCTGCGCGGAGGACCCCTCGCTGGAAAGGCATTTTAAGGGCCACCGAGATGCAGTTACCTGTGTGGACTTCAGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
CDS-3UTR CAA 90 bp TACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCACCTGCAAATCCACCGAGCGCACAGCGGACCCAGTaGATATGCTGGCTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: YPSPMVQIPGLPPANPPSAQRTQ*ICWLRE
Trigger: CTCCCTGAGCCAGCATATCAACTGGGTCCGCTGTGC...GCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp CTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGCCCGGCCCACTGGGGACCGGTCTGAAGCATCATTaGTGTGTGAGCCCGGCCCAC +
Preference number: 5 (lower is better)
Translates to: LSFGSEASFVCEPGPLGTGLKHH*CVSPAH
Trigger: GTGGGCCGGGCTCACACACAAATGATGCTTCAGACC...GGTCCCCAGTGGGCCGGGCTCACACACAAATGATGCTTCAGACCCGAATGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS TCA 90 bp TGTGTAGAGCAGCCGGCCCTCCATCAGGTCCAGGATCTTCAGGGTTaGGTCACTGGAGGCTGTGATCAGGTAGTTTCCCGACGGGTGGAA +
Preference number: 5 (lower is better)
Translates to: CVEQPALHQVQDLQG*VTGGCDQVVSRRVE
Trigger: TTCCACCCGTCGGGAAACTACCTGATCACAGCCTCCAGTGACTCAACCCTGAAGATCCTGGACCTGATGGAGGGCCGGCTGCTCTACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp AGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACAATCTCAGATGCGGACAGTCTaGTCTCGGGAGCCGGAAGCA +
Preference number: 5 (lower is better)
Translates to: SENQGIVEPPPPEGEPQSQMRTV*SREPEA
Trigger: TGCTTCCGGCTCCCGAGACAAGACTGTCCGCATCTG...AGATTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp CTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGCCCGGCCCACTGGGGACCCACACTTTGACTGTCTaGTCGTCAGAGGCTGTCACG +
Preference number: 5 (lower is better)
Translates to: LSFGSEASFVCEPGPLGTHTLTV*SSEAVT
Trigger: CGTGACAGCCTCTGACGACAAGACAGTCAAAGTGTG...GGTCCCCAGTGGGCCGGGCTCACACACAAATGATGCTTCAGACCCGAATGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS GCA 90 bp AAATCCCTGGCCTGCCACCTGCAAATCCACCGAGCTCCTGATTCCTaGTCCCCTGATCATGGTGTTGCTCTCTGCATGATTAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: KSLACHLQIHRAPDS*SPDHGVALCMISCW
Trigger: CCAGCAGCTAATCATGCAGAGAGCAACACCATGATCAGGGGAGCAGGAATCAGGAGCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS CCA 90 bp TGCTTTGTGTTGATACTGAAGTCCACACAGGTAACTGCATCTCGGTaGCCCTTAAAATGCCTTTCCAGCGAGGGGTCCTCCGCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: CFVLILKSTQVTASR*PLKCLSSEGSSAQG
Trigger: GCCCTGCGCGGAGGACCCCTCGCTGGAAAGGCATTTTAAGGGCCACCGAGATGCAGTTACCTGTGTGGACTTCAGTATCAACACAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
CDS CCA 90 bp GCCCACACTTTGACTGTCTTGTCGTCAGAGGCTGTCACGAAGGACTaGCCATCACTGCAGAAGTGGACACTCCTCACTGTGGCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: AHTLTVLSSEAVTKD*PSLQKWTLLTVAVC
Trigger: ACACACAGCCACAGTGAGGAGTGTCCACTTCTGCAGTGATGGCCAGTCCTTCGTGACAGCCTCTGACGACAAGACAGTCAAAGTGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS CCA 90 bp GAAGTCCACTTCTGGCAGATTCCCCATGGAGCTGGCCAGTGTGGCTaGGGGCCTCGGCACTTTCGTGACTTCTCCATGATCAACAATATC +
Preference number: 5 (lower is better)
Translates to: EVHFWQIPHGAGQCG*GPRHFRDFSMINNI
Trigger: GATATTGTTGATCATGGAGAAGTCACGAAAGTGCCGAGGCCCCCAGCCACACTGGCCAGCTCCATGGGGAATCTGCCAGAAGTGGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS-3UTR CAA 90 bp GAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCCACACCTTCACTGTGTaGTCCATGCCGGCAGCGGCA +
Preference number: 5 (lower is better)
Translates to: EFSPLYLPKSHGTNPWPAHTFTV*SMPAAA
Trigger: TGCCGCTGCCGGCATGGACAACACAGTGAAGGTGTG...GGCAGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp TCCAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCAGCTGCGGTGGCCGTaGCGGCCCGTTCAGTTTCCG +
Preference number: 5 (lower is better)
Translates to: SSMDVIPTEFSPLYLPKSQLRWP*RPVQFP
Trigger: CGGAAACTGAACGGGCCGCAACGGCCACCGCAGCTG...GGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394970.6
CDS TCA 90 bp GGCTCAGGGAGAACAGGAATTTCTGGCGATGAGTTGCCCACACTTTaGCTGTCTTGTCGTCAGAGGCTGTCACGAAGGACTGGCCATCAC +
Preference number: 5 (lower is better)
Translates to: GSGRTGISGDELPTL*LSCRQRLSRRTGHH
Trigger: GTGATGGCCAGTCCTTCGTGACAGCCTCTGACGACAAGACAGTCAAAGTGTGGGCAACTCATCGCCAGAAATTCCTGTTCTCCCTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS CCA 90 bp CAGAATGGAGACTGTCAGATTCCCCATGGAGCTGGCCAGTGTGGCTaGGGGCCTCGGCACTTTCGTGACTTCTCCATGATCAACAATATC +
Preference number: 5 (lower is better)
Translates to: QNGDCQIPHGAGQCG*GPRHFRDFSMINNI
Trigger: GATATTGTTGATCATGGAGAAGTCACGAAAGTGCCGAGGCCCCCAGCCACACTGGCCAGCTCCATGGGGAATCTGACAGTCTCCATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394970.6
CDS-3UTR CAA 90 bp TTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTCCGTCGGGGGAGAACTaGGCACAGCGGACCCAGTTG +
Preference number: 5 (lower is better)
Translates to: FPQSSVPFIYPSPMVQIPPSGEN*AQRTQL
Trigger: CAACTGGGTCCGCTGTGCCAAGTTCTCCCCCGACGG...AGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp AGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACAATCTAAAGCCACCACCCACTaGAGAGGGCTTGTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: SENQGIVEPPPPEGEPQSKATTH*RGLVLN
Trigger: GTTGAGAACAAGCCCTCTCAAGTGGGTGGTGGCTTT...AGATTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
CDS-3UTR CAA 90 bp GAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCAAGCGCCTCAGCTTTTaGCCCGACGACTGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: EFSPLYLPKSHGTNPWPAKRLSF*PDDWKQ
Trigger: CTGCTTCCAGTCGTCGGGCAAAAAGCTGAGGCGCTT...GGCAGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394970.6
CDS TCA 90 bp CACTTGTTCATCAGAGCCTCCAGAAGCAAAATACTCCCCCGTTCTTaGAAAGGCAACAGTGGTGGCTGGTCCCTGATGCCCGTGGAGTGT +
Preference number: 5 (lower is better)
Translates to: HLFIRASRSKILPRS*KGNSGGWSLMPVEC
Trigger: ACACTCCACGGGCATCAGGGACCAGCCACCACTGTTGCCTTTTCAAGAACGGGGGAGTATTTTGCTTCTGGAGGCTCTGATGAACAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS GCA 90 bp ACTGGCCAGCTGCTTTGTGTTGATACTGAAGTCCACACAGGTAACTaGATCTCGGTGGCCCTTAAAATGCCTTTCCAGCGAGGGGTCCTC +
Preference number: 5 (lower is better)
Translates to: TGQLLCVDTEVHTGN*ISVALKMPFQRGVL
Trigger: GAGGACCCCTCGCTGGAAAGGCATTTTAAGGGCCACCGAGATGCAGTTACCTGTGTGGACTTCAGTATCAACACAAAGCAGCTGGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS GCA 90 bp ATGTGCCAGACCATGAGGCATGAGTCCATGGAGCCACTGGCCAGCTaGTTTGTGTTGATACTGAAGTCCACACAGGTAACTGCATCTCGG +
Preference number: 5 (lower is better)
Translates to: MCQTMRHESMEPLAS*FVLILKSTQVTASR
Trigger: CCGAGATGCAGTTACCTGTGTGGACTTCAGTATCAACACAAAGCAGCTGGCCAGTGGCTCCATGGACTCATGCCTCATGGTCTGGCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS GCA 90 bp CTTTATTTACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCACCTaGAAATCCACCGAGCTCCTGATTCCTGCTCCCCTGATCATGGTG +
Preference number: 5 (lower is better)
Translates to: LYLPKSHGTNPWPAT*KSTELLIPAPLIMV
Trigger: CACCATGATCAGGGGAGCAGGAATCAGGAGCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGTAAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp AGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACAATCTGCCAGCTGCTTTGTGTaGATACTGAAGTCCACACAG +
Preference number: 5 (lower is better)
Translates to: SENQGIVEPPPPEGEPQSASCFV*ILKSTQ
Trigger: CTGTGTGGACTTCAGTATCAACACAAAGCAGCTGGC...AGATTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp GTCCAAATGATGAGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGACTCACCTTTGACATaGGGTACCCAGATGCGGACA +
Preference number: 5 (lower is better)
Translates to: VQMMSENQGIVEPPPPEGDSPLT*GTQMRT
Trigger: TGTCCGCATCTGGGTACCCAATGTCAAAGGTGAGTC...CCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACTCATCATTTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp ATGATGAGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCAAATACTCCCCCGTTCTaGAAAAGGCAACAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: MMSENQGIVEPPPPEGEPNTPPF*KRQQWW
Trigger: CCACCACTGTTGCCTTTTCAAGAACGGGGGAGTATT...TGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACTCATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp ACCCAAGTCCCATGGTACAAATCCCTGGCCTGCCACCTGCAAATCCACCGAGCTAGACACTGCTTCAGCTaGTCTTCTGTCAGTGTCAAC +
Preference number: 5 (lower is better)
Translates to: TQVPWYKSLACHLQIHRARHCFS*SSVSVN
Trigger: GTTGACACTGACAGAAGACAAGCTGAAGCAGTGTCT...AGCTCGGTGGATTTGCAGGTGGCAGGCCAGGGATTTGTACCATGGGACTTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS TCA 90 bp ACCCAGTTGATATGCTGGCTCAGGGAGAACAGGAATTTCTGGCGATaGGTTGCCCACACTTTGACTGTCTTGTCGTCAGAGGCTGTCACG +
Preference number: 5 (lower is better)
Translates to: TQLICWLRENRNFWR*VAHTLTVLSSEAVT
Trigger: CGTGACAGCCTCTGACGACAAGACAGTCAAAGTGTGGGCAACTCATCGCCAGAAATTCCTGTTCTCCCTGAGCCAGCATATCAACTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS TCA 90 bp TCCCCATGGAGCTGGCCAGTGTGGCTGGGGGCCTCGGCACTTTCGTaGCTTCTCCATGATCAACAATATCAAAGTTACTCTTCCAAACCA +
Preference number: 5 (lower is better)
Translates to: SPWSWPVWLGASALS*LLHDQQYQSYSSKP
Trigger: TGGTTTGGAAGAGTAACTTTGATATTGTTGATCATGGAGAAGTCACGAAAGTGCCGAGGCCCCCAGCCACACTGGCCAGCTCCATGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp TCCAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCACACCTTCACTGTGTaGTCCATGCCGGCAGCGGCA +
Preference number: 5 (lower is better)
Translates to: SSMDVIPTEFSPLYLPKSHTFTV*SMPAAA
Trigger: TGCCGCTGCCGGCATGGACAACACAGTGAAGGTGTG...GGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp AGTGAAAATCAAGGCATCGTGGAGCCACCTCCTCCAGAGGGGGAGCCACAATCTCTTCCAAACCATCACTaGTTCATCAGAGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: SENQGIVEPPPPEGEPQSLPNHH*FIRASR
Trigger: TCTGGAGGCTCTGATGAACAAGTGATGGTTTGGAAG...AGATTGTGGCTCCCCCTCTGGAGGAGGTGGCTCCACGATGCCTTGATTTTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS GCA 90 bp GTTGATATGCTGGCTCAGGGAGAACAGGAATTTCTGGCGATGAGTTaGCCACACTTTGACTGTCTTGTCGTCAGAGGCTGTCACGAAGGA +
Preference number: 5 (lower is better)
Translates to: VDMLAQGEQEFLAMS*PHFDCLVVRGCHEG
Trigger: TCCTTCGTGACAGCCTCTGACGACAAGACAGTCAAAGTGTGGGCAACTCATCGCCAGAAATTCCTGTTCTCCCTGAGCCAGCATATCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp AATTTTGAGATTCCTGTGCCCTCACTCACGCAAGGAGGAAGTCACCTGGCTCCAGCCAGCTGCTTTGTGTaGATACTGAAGTCCACACAG +
Preference number: 5 (lower is better)
Translates to: NFEIPVPSLTQGGSHLAPASCFV*ILKSTQ
Trigger: CTGTGTGGACTTCAGTATCAACACAAAGCAGCTGGC...TGGAGCCAGGTGACTTCCTCCTTGCGTGAGTGAGGGCACAGGAATCTCAAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296484.7
CDS-3UTR CAA 90 bp GGCAGAACTGCAAAAATCCAGGGCTCCAGTATGGATGTGATTCCCACAGAGTTCCACACTTTGACTGTCTaGTCGTCAGAGGCTGTCACG +
Preference number: 5 (lower is better)
Translates to: GRTAKIQGSSMDVIPTEFHTLTV*SSEAVT
Trigger: CGTGACAGCCTCTGACGACAAGACAGTCAAAGTGTG...GAACTCTGTGGGAATCACATCCATACTGGAGCCCTGGATTTTTGCAGTTCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp ATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGGCACAGCGGACCCAGTaGATATGCTGGCTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: IKQNVVLSFGSEASFVCEAQRTQ*ICWLRE
Trigger: CTCCCTGAGCCAGCATATCAACTGGGTCCGCTGTGC...CTCACACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp CAGTATGGATGTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCACATTCCCGGCTGCTCTaGTCCCACAGCTTAACAGTC +
Preference number: 5 (lower is better)
Translates to: QYGCDSHRVQSPLFTQVPHSRLL*SHSLTV
Trigger: GACTGTTAAGCTGTGGGACAAGAGCAGCCGGGAATG...TGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCACATCCATACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp TTTAATTTTGAGATTCCTGTGCCCTCACTCACGCAAGGAGGAAGTCACCTGGCTAAAGCCACCACCCACTaGAGAGGGCTTGTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: FNFEIPVPSLTQGGSHLAKATTH*RGLVLN
Trigger: GTTGAGAACAAGCCCTCTCAAGTGGGTGGTGGCTTT...AGCCAGGTGACTTCCTCCTTGCGTGAGTGAGGGCACAGGAATCTCAAAATTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296484.7
CDS-3UTR CAA 90 bp GAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTGGTCCTCTCATCAGATGCGGACAGTCTaGTCTCGGGAGCCGGAAGCA +
Preference number: 5 (lower is better)
Translates to: EQTFSSGSFTLSKMWSSHQMRTV*SREPEA
Trigger: TGCTTCCGGCTCCCGAGACAAGACTGTCCGCATCTG...ATGAGAGGACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp CTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAAGACTCACCTTTGACATaGGGTACCCAGATGCGGACA +
Preference number: 5 (lower is better)
Translates to: LRTPKEQTFSSGSFTLSKDSPLT*GTQMRT
Trigger: TGTCCGCATCTGGGTACCCAATGTCAAAGGTGAGTC...TTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp CACAATCTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAGACTCACCTTTGACATaGGGTACCCAGATGCGGACA +
Preference number: 5 (lower is better)
Translates to: HNLRTPKEQTFSSGSFTLDSPLT*GTQMRT
Trigger: TGTCCGCATCTGGGTACCCAATGTCAAAGGTGAGTC...TAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAGATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp CTCCTTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTCACACCTTCACTGTGTaGTCCATGCCGGCAGCGGCA +
Preference number: 5 (lower is better)
Translates to: LLYIKQNVVLSFGSEASFHTFTV*SMPAAA
Trigger: TGCCGCTGCCGGCATGGACAACACAGTGAAGGTGTG...AAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp AGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAAGGCATCGGTCTGAAGCATCATTaGTGTGTGAGCCCGGCCCAC +
Preference number: 5 (lower is better)
Translates to: RGRKSQSHVQMMSENQGIGLKHH*CVSPAH
Trigger: GTGGGCCGGGCTCACACACAAATGATGCTTCAGACC...GATGCCTTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp CATGGCAGAGGTAGGAAAAGCCAGTCACATGTCCAAATGATGAGTGAAAATCAAGGTCTGAAGCATCATTaGTGTGTGAGCCCGGCCCAC +
Preference number: 5 (lower is better)
Translates to: HGRGRKSQSHVQMMSENQGLKHH*CVSPAH
Trigger: GTGGGCCGGGCTCACACACAAATGATGCTTCAGACC...TTGATTTTCACTCATCATTTGGACATGTGACTGGCTTTTCCTACCTCTGCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp TCTCAGGACCCCGAAGGAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATACTCCCCCGTTCTaGAAAAGGCAACAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: SQDPEGADIFKWLLYIKQNTPPF*KRQQWW
Trigger: CCACCACTGTTGCCTTTTCAAGAACGGGGGAGTATT...TTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTCCTTCGGGGTCCTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp TCCTGCAACAAGTGCAATGAAGTCAGGTTTAATTTTGAGATTCCTGTGCCCTCACACACTTTGACTGTCTaGTCGTCAGAGGCTGTCACG +
Preference number: 5 (lower is better)
Translates to: SCNKCNEVRFNFEIPVPSHTLTV*SSEAVT
Trigger: CGTGACAGCCTCTGACGACAAGACAGTCAAAGTGTG...TGAGGGCACAGGAATCTCAAAATTAAACCTGACTTCATTGCACTTGTTGCAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296484.7
CDS-3UTR CAA 90 bp TCAGATTTAGAGAAAACCCCCGGCTCATCCAATCAATGTGCAATCAATTTCTACCATTCCCGGCTGCTCTaGTCCCACAGCTTAACAGTC +
Preference number: 5 (lower is better)
Translates to: SDLEKTPGSSNQCAINFYHSRLL*SHSLTV
Trigger: GACTGTTAAGCTGTGGGACAAGAGCAGCCGGGAATG...GTAGAAATTGATTGCACATTGATTGGATGAGCCGGGGGTTTTCTCTAAATCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
CDS-3UTR CAA 90 bp ACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTCATTCCCGGCTGCTCTaGTCCCACAGCTTAACAGTC +
Preference number: 5 (lower is better)
Translates to: TFSSGSFTLSKMWSSHSGHSRLL*SHSLTV
Trigger: GACTGTTAAGCTGTGGGACAAGAGCAGCCGGGAATG...ACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp GATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCAGACACTGCTTCAGCTaGTCTTCTGTCAGTGTCAAC +
Preference number: 5 (lower is better)
Translates to: DSHRVQSPLFTQVPWYKSRHCFS*SSVSVN
Trigger: GTTGACACTGACAGAAGACAAGCTGAAGCAGTGTCT...GGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp ATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGGCCAGCTGCTTTGTGTaGATACTGAAGTCCACACAG +
Preference number: 5 (lower is better)
Translates to: IKQNVVLSFGSEASFVCEASCFV*ILKSTQ
Trigger: CTGTGTGGACTTCAGTATCAACACAAAGCAGCTGGC...CTCACACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp GTGATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCTTCCAAACCATCACTaGTTCATCAGAGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: VIPTEFSPLYLPKSHGTNLPNHH*FIRASR
Trigger: TCTGGAGGCTCTGATGAACAAGTGATGGTTTGGAAG...ATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp GAGCAGACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTGGTCCTCTCATAATACTCCCCCGTTCTaGAAAAGGCAACAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: EQTFSSGSFTLSKMWSSHNTPPF*KRQQWW
Trigger: CCACCACTGTTGCCTTTTCAAGAACGGGGGAGTATT...ATGAGAGGACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGTCTGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp ATTAAGCAAAATGTGGTCCTCTCATTCGGGTCTGAAGCATCATTTGTGTGTGAGCTTCCAAACCATCACTaGTTCATCAGAGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: IKQNVVLSFGSEASFVCELPNHH*FIRASR
Trigger: TCTGGAGGCTCTGATGAACAAGTGATGGTTTGGAAG...CTCACACACAAATGATGCTTCAGACCCGAATGAGAGGACCACATTTTGCTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS-3UTR CAA 90 bp ATTCCCACAGAGTTCAGTCCCCTTTATTTACCCAAGTCCCATGGTACAAATCCCAAGTCAGGTTTAATTTaGAGATTCCTGTGCCCTCAC +
Preference number: 5 (lower is better)
Translates to: IPTEFSPLYLPKSHGTNPKSGLI*RFLCPH
Trigger: GTGAGGGCACAGGAATCTCAAAATTAAACCTGACTT...GGGATTTGTACCATGGGACTTGGGTAAATAAAGGGGACTGAACTCTGTGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296484.7
CDS-3UTR CAA 90 bp ACATTTTCAAGTGGCTCCTTTACATTAAGCAAAATGTGGTCCTCTCATTCGGGTAGACACTGCTTCAGCTaGTCTTCTGTCAGTGTCAAC +
Preference number: 5 (lower is better)
Translates to: TFSSGSFTLSKMWSSHSGRHCFS*SSVSVN
Trigger: GTTGACACTGACAGAAGACAAGCTGAAGCAGTGTCT...ACCCGAATGAGAGGACCACATTTTGCTTAATGTAAAGGAGCCACTTGAAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS CCA 72 bp AGGGGTCCTCCGCGCAGGGCGCAGCCATGGCGGGGCTaGCGGCGCCGAAGGCAGCTGCGGTGGCCGTTGCGG +
Preference number: 6 (lower is better)
Translates to: RGPPRRAQPWRG*RRRRQLRWPLR
Trigger: CCGCAACGGCCACCGCAGCTGCCTTCGGCGCCGCCAGCCCCGCCATGGCTGCGCCCTGCGCGGAGGACCCCT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000394970.6
CDS GCA 72 bp GAGCTGTATGACCGGCGGCCGGCGCCACGGTCTCCGTaGCCAGTTCCCCAAGCCCAGACAACCCACAGACAG +
Preference number: 6 (lower is better)
Translates to: ELYDRRPAPRSP*PVPQAQTTHRQ
Trigger: CTGTCTGTGGGTTGTCTGGGCTTGGGGAACTGGGCACGGAGACCGTGGCGCCGGCCGCCGGTCATACAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394970.6
CDS TCA 72 bp TCAGCTTTTTGCCCGACGACTGGAAGCAGAGCTGTATaGCCGGCGGCCGGCGCCACGGTCTCCGTGCCCAGT +
Preference number: 6 (lower is better)
Translates to: SAFCPTTGSRAV*PAAGATVSVPS
Trigger: ACTGGGCACGGAGACCGTGGCGCCGGCCGCCGGTCATACAGCTCTGCTTCCAGTCGTCGGGCAAAAAGCTGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394970.6
CDS CCA 72 bp TGGCCCACAATGTGCTCCAGCGTGCTAGTCAGTGTCTaGGGCACACTCACGGGCTCCTGGGGCTGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: WPTMCSSVLVSV*GTLTGSWGWLC
Trigger: GCAGAGCCAGCCCCAGGAGCCCGTGAGTGTGCCCCAGACACTGACTAGCACGCTGGAGCACATTGTGGGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296484.7
ENST00000474012.1
CDS GCA 72 bp GAGTCCGCACGTCCCACACCTTCACTGTGTTGTCCATaGCGGCAGCGGCAATGCACGTCCCACTGGGGTGGA +
Preference number: 6 (lower is better)
Translates to: ESARPTPSLCCP*RQRQCTSHWGG
Trigger: TCCACCCCAGTGGGACGTGCATTGCCGCTGCCGGCATGGACAACACAGTGAAGGTGTGGGACGTGCGGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS TCA 72 bp GGTAGGCGCGTGACTGCGGCTTCATGTGCCAGACCATaGGGCATGAGTCCATGGAGCCACTGGCCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: GRRVTAASCARP*GMSPWSHWPAA
Trigger: AGCAGCTGGCCAGTGGCTCCATGGACTCATGCCTCATGGTCTGGCACATGAAGCCGCAGTCACGCGCCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS CCA 72 bp TTAAAGGAGAAGCGCCTCAGCTTTTTGCCCGACGACTaGAAGCAGAGCTGTATGACCGGCGGCCGGCGCCAC +
Preference number: 6 (lower is better)
Translates to: LKEKRLSFLPDD*KQSCMTGGRRH
Trigger: GTGGCGCCGGCCGCCGGTCATACAGCTCTGCTTCCAGTCGTCGGGCAAAAAGCTGAGGCGCTTCTCCTTTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394970.6
CDS CCA 72 bp GACTGTCAGATTCCCCATGGAGCTGGCCAGTGTGGCTaGGGGCCTCGGCACTTTCGTGACTTCTCCATGATC +
Preference number: 6 (lower is better)
Translates to: DCQIPHGAGQCG*GPRHFRDFSMI
Trigger: GATCATGGAGAAGTCACGAAAGTGCCGAGGCCCCCAGCCACACTGGCCAGCTCCATGGGGAATCTGACAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394970.6
CDS CAA 72 bp CGCCCGTCGGGGGAGAACTTGGCACAGCGGACCCAGTaGATATGCTGGCTCAGGGAGAACAGGAATTTCTGG +
Preference number: 6 (lower is better)
Translates to: RPSGENLAQRTQ*ICWLRENRNFW
Trigger: CCAGAAATTCCTGTTCTCCCTGAGCCAGCATATCAACTGGGTCCGCTGTGCCAAGTTCTCCCCCGACGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS CAA 90 bp GAGTGGACACATTCCCGGCTGCTCTTGTCCCACAGCTTAACAGTCTaGTCATCACTGGCAGACACGATGAGCCGCCCGTCGGGGGAGAAC +
Preference number: 6 (lower is better)
Translates to: EWTHSRLLLSHSLTV*SSLADTMSRPSGEN
Trigger: GTTCTCCCCCGACGGGCGGCTCATCGTGTCTGCCAGTGATGACAAGACTGTTAAGCTGTGGGACAAGAGCAGCCGGGAATGTGTCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS TCA 72 bp CAGCCGGCCCTCCATCAGGTCCAGGATCTTCAGGGTTaGGTCACTGGAGGCTGTGATCAGGTAGTTTCCCGA +
Preference number: 6 (lower is better)
Translates to: QPALHQVQDLQG*VTGGCDQVVSR
Trigger: TCGGGAAACTACCTGATCACAGCCTCCAGTGACTCAACCCTGAAGATCCTGGACCTGATGGAGGGCCGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS CAA 72 bp CATTCCCGGCTGCTCTTGTCCCACAGCTTAACAGTCTaGTCATCACTGGCAGACACGATGAGCCGCCCGTCG +
Preference number: 6 (lower is better)
Translates to: HSRLLLSHSLTV*SSLADTMSRPS
Trigger: CGACGGGCGGCTCATCGTGTCTGCCAGTGATGACAAGACTGTTAAGCTGTGGGACAAGAGCAGCCGGGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS CAA 90 bp ACAGTGGACTCACCTTTGACATTGGGTACCCAGATGCGGACAGTCTaGTCTCGGGAGCCGGAAGCAAGCAGGTGTCCCGAAGGAGAGAAG +
Preference number: 6 (lower is better)
Translates to: TVDSPLTLGTQMRTV*SREPEASRCPEGEK
Trigger: CTTCTCTCCTTCGGGACACCTGCTTGCTTCCGGCTCCCGAGACAAGACTGTCCGCATCTGGGTACCCAATGTCAAAGGTGAGTCCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS GCA 72 bp GTAGTTTCCCGACGGGTGGAAAGAGAGCCCGTTCACTaGTGCACTGTGCAACTGATAATGCTGCAGCAGCCG +
Preference number: 6 (lower is better)
Translates to: VVSRRVEREPVH*CTVQLIMLQQP
Trigger: CGGCTGCTGCAGCATTATCAGTTGCACAGTGCAGCAGTGAACGGGCTCTCTTTCCACCCGTCGGGAAACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS CAA 72 bp TCACCTTTGACATTGGGTACCCAGATGCGGACAGTCTaGTCTCGGGAGCCGGAAGCAAGCAGGTGTCCCGAA +
Preference number: 6 (lower is better)
Translates to: SPLTLGTQMRTV*SREPEASRCPE
Trigger: TTCGGGACACCTGCTTGCTTCCGGCTCCCGAGACAAGACTGTCCGCATCTGGGTACCCAATGTCAAAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS TCA 72 bp ATCAGAGCCTCCAGAAGCAAAATACTCCCCCGTTCTTaGAAAGGCAACAGTGGTGGCTGGTCCCTGATGCCC +
Preference number: 6 (lower is better)
Translates to: IRASRSKILPRS*KGNSGGWSLMP
Trigger: GGGCATCAGGGACCAGCCACCACTGTTGCCTTTTCAAGAACGGGGGAGTATTTTGCTTCTGGAGGCTCTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS CCA 72 bp ACTGGCCATCACTGCAGAAGTGGACACTCCTCACTGTaGCTGTGTGTGCACGAAACACAGTGGACTCACCTT +
Preference number: 6 (lower is better)
Translates to: TGHHCRSGHSSL*LCVHETQWTHL
Trigger: AAGGTGAGTCCACTGTGTTTCGTGCACACACAGCCACAGTGAGGAGTGTCCACTTCTGCAGTGATGGCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS CAA 90 bp ACCATGAGGCATGAGTCCATGGAGCCACTGGCCAGCTGCTTTGTGTaGATACTGAAGTCCACACAGGTAACTGCATCTCGGTGGCCCTTA +
Preference number: 6 (lower is better)
Translates to: TMRHESMEPLASCFV*ILKSTQVTASRWPL
Trigger: TAAGGGCCACCGAGATGCAGTTACCTGTGTGGACTTCAGTATCAACACAAAGCAGCTGGCCAGTGGCTCCATGGACTCATGCCTCATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS CAA 90 bp AAGCCGCCATGCTCACAATACGAGTGGACACATTCCCGGCTGCTCTaGTCCCACAGCTTAACAGTCTTGTCATCACTGGCAGACACGATG +
Preference number: 6 (lower is better)
Translates to: KPPCSQYEWTHSRLL*SHSLTVLSSLADTM
Trigger: CATCGTGTCTGCCAGTGATGACAAGACTGTTAAGCTGTGGGACAAGAGCAGCCGGGAATGTGTCCACTCGTATTGTGAGCATGGCGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS GCA 72 bp CTGGCTCAGGGAGAACAGGAATTTCTGGCGATGAGTTaGCCACACTTTGACTGTCTTGTCGTCAGAGGCTGT +
Preference number: 6 (lower is better)
Translates to: LAQGEQEFLAMS*PHFDCLVVRGC
Trigger: ACAGCCTCTGACGACAAGACAGTCAAAGTGTGGGCAACTCATCGCCAGAAATTCCTGTTCTCCCTGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS GCA 72 bp CACTGCTTCAGCTTGTCTTCTGTCAGTGTCAACCGCTaGTCCAGAATGGAGACTGTCAGATTCCCCATGGAG +
Preference number: 6 (lower is better)
Translates to: HCFSLSSVSVNR*SRMETVRFPME
Trigger: CTCCATGGGGAATCTGACAGTCTCCATTCTGGAGCAGCGGTTGACACTGACAGAAGACAAGCTGAAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394970.6
CDS CCA 72 bp TTGATACTGAAGTCCACACAGGTAACTGCATCTCGGTaGCCCTTAAAATGCCTTTCCAGCGAGGGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: LILKSTQVTASR*PLKCLSSEGSS
Trigger: GGAGGACCCCTCGCTGGAAAGGCATTTTAAGGGCCACCGAGATGCAGTTACCTGTGTGGACTTCAGTATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS CAA 72 bp CATGAGTCCATGGAGCCACTGGCCAGCTGCTTTGTGTaGATACTGAAGTCCACACAGGTAACTGCATCTCGG +
Preference number: 6 (lower is better)
Translates to: HESMEPLASCFV*ILKSTQVTASR
Trigger: CCGAGATGCAGTTACCTGTGTGGACTTCAGTATCAACACAAAGCAGCTGGCCAGTGGCTCCATGGACTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS TCA 72 bp AGCTGGCCAGTGTGGCTGGGGGCCTCGGCACTTTCGTaGCTTCTCCATGATCAACAATATCAAAGTTACTCT +
Preference number: 6 (lower is better)
Translates to: SWPVWLGASALS*LLHDQQYQSYS
Trigger: AGAGTAACTTTGATATTGTTGATCATGGAGAAGTCACGAAAGTGCCGAGGCCCCCAGCCACACTGGCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS CAA 72 bp TGCTCACAATACGAGTGGACACATTCCCGGCTGCTCTaGTCCCACAGCTTAACAGTCTTGTCATCACTGGCA +
Preference number: 6 (lower is better)
Translates to: CSQYEWTHSRLL*SHSLTVLSSLA
Trigger: TGCCAGTGATGACAAGACTGTTAAGCTGTGGGACAAGAGCAGCCGGGAATGTGTCCACTCGTATTGTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS TCA 72 bp AGAACAGGAATTTCTGGCGATGAGTTGCCCACACTTTaGCTGTCTTGTCGTCAGAGGCTGTCACGAAGGACT +
Preference number: 6 (lower is better)
Translates to: RTGISGDELPTL*LSCRQRLSRRT
Trigger: AGTCCTTCGTGACAGCCTCTGACGACAAGACAGTCAAAGTGTGGGCAACTCATCGCCAGAAATTCCTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS TCA 72 bp ATATGCTGGCTCAGGGAGAACAGGAATTTCTGGCGATaGGTTGCCCACACTTTGACTGTCTTGTCGTCAGAG +
Preference number: 6 (lower is better)
Translates to: ICWLRENRNFWR*VAHTLTVLSSE
Trigger: CTCTGACGACAAGACAGTCAAAGTGTGGGCAACTCATCGCCAGAAATTCCTGTTCTCCCTGAGCCAGCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1
CDS GCA 72 bp CTGCTTTGTGTTGATACTGAAGTCCACACAGGTAACTaGATCTCGGTGGCCCTTAAAATGCCTTTCCAGCGA +
Preference number: 6 (lower is better)
Translates to: LLCVDTEVHTGN*ISVALKMPFQR
Trigger: TCGCTGGAAAGGCATTTTAAGGGCCACCGAGATGCAGTTACCTGTGTGGACTTCAGTATCAACACAAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296484.7
ENST00000394970.6
ENST00000474012.1