Pregenerated sensors for PNRC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000189266

Ensembl transcript IDs: ENST00000471915.5, ENST00000647887.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AGGCGGTTCAGACACACGCGGGCAAGTCAGTCACTTCCTGCTTGGTaGCCCCATTGGTCCTTAAGTTCAATTAGAGCCCTTTACGCGCCG	+
Preference number: 5 (lower is better) Translates to: RRFRHTRASQSLPAW*PHWSLSSIRALYAP Trigger: CGGCGCGTAAAGGGCTCTAATTGAACTTAAGGACCAATGGGGCCACCAAGCAGGAAGTGACTGACTTGCCCGCGTGTGTCTGAACCGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471915.5
CDS CCA 90 bp	AGACACACGCGGGCAAGTCAGTCACTTCCTGCTTGGTGGCCCCATTaGTCCTTAAGTTCAATTAGAGCCCTTTACGCGCCGTGTTACCGT	+
Preference number: 5 (lower is better) Translates to: RHTRASQSLPAWWPH*SLSSIRALYAPCYR Trigger: ACGGTAACACGGCGCGTAAAGGGCTCTAATTGAACTTAAGGACCAATGGGGCCACCAAGCAGGAAGTGACTGACTTGCCCGCGTGTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471915.5
CDS CCA 72 bp	CGGGCAAGTCAGTCACTTCCTGCTTGGTGGCCCCATTaGTCCTTAAGTTCAATTAGAGCCCTTTACGCGCCG	+
Preference number: 6 (lower is better) Translates to: RASQSLPAWWPH*SLSSIRALYAP Trigger: CGGCGCGTAAAGGGCTCTAATTGAACTTAAGGACCAATGGGGCCACCAAGCAGGAAGTGACTGACTTGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471915.5
CDS CCA 72 bp	AGACACACGCGGGCAAGTCAGTCACTTCCTGCTTGGTaGCCCCATTGGTCCTTAAGTTCAATTAGAGCCCTT	+
Preference number: 6 (lower is better) Translates to: RHTRASQSLPAW*PHWSLSSIRAL Trigger: AAGGGCTCTAATTGAACTTAAGGACCAATGGGGCCACCAAGCAGGAAGTGACTGACTTGCCCGCGTGTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471915.5
CDS CCA 72 bp	TTCAGACACACGCGGGCAAGTCAGTCACTTCCTGCTTaGTGGCCCCATTGGTCCTTAAGTTCAATTAGAGCC	+
Preference number: 6 (lower is better) Translates to: FRHTRASQSLPA*WPHWSLSSIRA Trigger: GGCTCTAATTGAACTTAAGGACCAATGGGGCCACCAAGCAGGAAGTGACTGACTTGCCCGCGTGTGTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471915.5
CDS CAA 72 bp	CCGACAAACAGCTCTCAGGATACAGCTCACCTAAATTaGTGCCAGGCACTATGCCACGCTCTGGGGATACAG	+
Preference number: 6 (lower is better) Translates to: PTNSSQDTAHLN*CQALCHALGIQ Trigger: CTGTATCCCCAGAGCGTGGCATAGTGCCTGGCACAAATTTAGGTGAGCTGTATCCTGAGAGCTGTTTGTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647887.1
CDS CAA 90 bp	ACCAGCACAATCCTATTAGCAGTTCTCAATTCAAATAGGAAAATGTaGATGCCGACAAACAGCTCTCAGGATACAGCTCACCTAAATTTG	+
Preference number: 6 (lower is better) Translates to: TSTILLAVLNSNRKM*MPTNSSQDTAHLNL Trigger: CAAATTTAGGTGAGCTGTATCCTGAGAGCTGTTTGTCGGCATCAACATTTTCCTATTTGAATTGAGAACTGCTAATAGGATTGTGCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647887.1

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