RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PNPO (Homo sapiens)

Ensembl gene IDs: ENSG00000108439

Ensembl transcript IDs: ENST00000225573.5, ENST00000434554.7, ENST00000582171.6, ENST00000583245.6, ENST00000584061.6, ENST00000585320.5, ENST00000641305.1, ENST00000641323.1, ENST00000641427.1, ENST00000641703.1, ENST00000641709.1, ENST00000641856.1, ENST00000642017.2

Found 632 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGTGGGTAGGCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTTaGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACAT +
Preference number: 1 (lower is better)
Translates to: LWVGPAERLSGHAGG*FDLARTPSPEGTGH
Trigger: ATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGCCTACCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR GCA 90 bp GCAGGGTCAGATTCAGTGGGTCTGGGGTCTGAATCTCTAAGGCGCTaGCAAGTGATGCTGATGCTCCTGGCTTGTGGACCACCCTGTGTA +
Preference number: 1 (lower is better)
Translates to: AGSDSVGLGSESLRR*QVMLMLLACGPPCV
Trigger: TACACAGGGTGGTCCACAAGCCAGGAGCATCAGCATCACTTGGCAGCGCCTTAGAGATTCAGACCCCAGACCCACTGAATCTGACCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR GCA 90 bp GTGGGGTGGCATAAGAAGGTGACTGAGGAAGCAAGAGCCAAACCCTaGAGGCCCTGGGAAAGATTACTAGCTCTTTTCACCCACCAGCTC +
Preference number: 1 (lower is better)
Translates to: VGWHKKVTEEARAKP*RPWERLLALFTHQL
Trigger: GAGCTGGTGGGTGAAAAGAGCTAGTAATCTTTCCCAGGGCCTGCAGGGTTTGGCTCTTGCTTCCTCAGTCACCTTCTTATGCCACCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR CCA 90 bp ATAAGGGGTAGGGAGGGAAATGGGTTGAGTTTAGAAAGAAGGGCCTaGGTCCCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCC +
Preference number: 1 (lower is better)
Translates to: IRGREGNGLSLERRA*VPIPHPLLTPSPSS
Trigger: GGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGGGACCCAGGCCCTTCTTTCTAAACTCAACCCATTTCCCTCCCTACCCCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR TCA 90 bp AGTGGCAAGCTCAGTGCCAGCCAGTGCAAGCAACAGGCAGTTCTTTaGTCCTGGCTTAGTCACAGCAAACATTTACCCAGCCTGGCTCTT +
Preference number: 1 (lower is better)
Translates to: SGKLSASQCKQQAVL*SWLSHSKHLPSLAL
Trigger: AAGAGCCAGGCTGGGTAAATGTTTGCTGTGACTAAGCCAGGATCAAAGAACTGCCTGTTGCTTGCACTGGCTGGCACTGAGCTTGCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR GCA 90 bp GCATGGACTCAGGGAGGTTTACTCATTTTGGATTCATTCATTGAATaGACGCGAAGTGCCCACTCTGGGTCTGACAACAGGAGACGTGCG +
Preference number: 1 (lower is better)
Translates to: AWTQGGLLILDSFIE*TRSAHSGSDNRRRA
Trigger: CGCACGTCTCCTGTTGTCAGACCCAGAGTGGGCACTTCGCGTGCATTCAATGAATGAATCCAAAATGAGTAAACCTCCCTGAGTCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR TCA 90 bp TCAAACCAGGCAGCAAACTGTTTCACTGGGTCAAGGGAGGTCAGATaGGTCTCCTCAAATGCCCATTACGAAAGGCTGCCTTTTGAACCC +
Preference number: 1 (lower is better)
Translates to: SNQAANCFTGSREVR*VSSNAHYERLPFEP
Trigger: GGGTTCAAAAGGCAGCCTTTCGTAATGGGCATTTGAGGAGACTCATCTGACCTCCCTTGACCCAGTGAAACAGTTTGCTGCCTGGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641323.1
3UTR GCA 90 bp CTGAAGGAACAGGTCATGGCTGATGGGGTGAGGCTGGTTAGAAAGTaGATTCATTCATTTATGGCAAAGAGCACAGCAAGTGCCAAGGCC +
Preference number: 1 (lower is better)
Translates to: LKEQVMADGVRLVRK*IHSFMAKSTASAKA
Trigger: GGCCTTGGCACTTGCTGTGCTCTTTGCCATAAATGAATGAATGCACTTTCTAACCAGCCTCACCCCATCAGCCATGACCTGTTCCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR TCA 90 bp GCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTGGCTGCTATGAATaGCTTGGCTTTAATGACTCCCAAGGTTCTGGATCTCTCCAGTTC +
Preference number: 1 (lower is better)
Translates to: AGRGFWFLLFPGCYE*LGFNDSQGSGSLQF
Trigger: GAACTGGAGAGATCCAGAACCTTGGGAGTCATTAAAGCCAAGTCATTCATAGCAGCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR CCA 90 bp TCTCTCACCCACAGATTTGTGAGTCTTGAGAAATGCATGCTTGGCTaGCATGGACTCAGGGAGGTTTACTCATTTTGGATTCATTCATTG +
Preference number: 1 (lower is better)
Translates to: SLTHRFVSLEKCMLG*HGLREVYSFWIHSL
Trigger: CAATGAATGAATCCAAAATGAGTAAACCTCCCTGAGTCCATGCCAGCCAAGCATGCATTTCTCAAGACTCACAAATCTGTGGGTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR TCA 90 bp GGAATAAAAATTCCTAGTGACAGCCCACTCCTTCTCAGGCAGGTGTaGTTGTTTGAAATCTCTCCCAATATTGAGATGAAACCTGCTTCC +
Preference number: 1 (lower is better)
Translates to: GIKIPSDSPLLLRQV*LFEISPNIEMKPAS
Trigger: GGAAGCAGGTTTCATCTCAATATTGGGAGAGATTTCAAACAATCACACCTGCCTGAGAAGGAGTGGGCTGTCACTAGGAATTTTTATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR-3UTR GCA 90 bp CCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGTCCCAGGTAACAGACAGGGCTaGTGGGGCCCTGTCTGTCAC +
Preference number: 2 (lower is better)
Translates to: PHPLLTPSPSSTLGQQVPGNRQG*WGPVCH
Trigger: GTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACC...TGGGACCTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR CCA 90 bp CACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGTCCCAGAGAACAGACAGGGCTGCTaGGGCCCTGTCTGTCACCAG +
Preference number: 2 (lower is better)
Translates to: HPLLTPSPSSTLGQQVPENRQGC*GPVCHQ
Trigger: CTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTT...CTCTGGGACCTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR TCA 90 bp AAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGTGGGTCATGGGCCCCTTCCACACGCACCTaGCGGTTAAGTGGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: KVQVSHRASLPPRGGSWAPSTRT*RLSGSQ
Trigger: CTGGGAGCCACTTAACCGTCAGGTGCGTGTGGAAGG...GGCCCATGACCCACCGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR TCA 90 bp TGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGTGGGTCATGGGCCCCAACAGAACTCTGGTGGCTaGCCACAGCCCCAATCTGGC +
Preference number: 2 (lower is better)
Translates to: CKSLIEPVFLPAVGHGPQQNSGG*PQPQSG
Trigger: GCCAGATTGGGGCTGTGGTCAGCCACCAGAGTTCTG...TTGGGGCCCATGACCCACCGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR GCA 90 bp CCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGGTAACAGACAGGGCTaGTGGGGCCCTGTCTGTCAC +
Preference number: 2 (lower is better)
Translates to: PIPHPLLTPSPSSTLGQQGNRQG*WGPVCH
Trigger: GTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACC...CTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR CCA 90 bp TGGGTCCCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCAACAGACAGGGCTGCTaGGGCCCTGTCTGTCACCAG +
Preference number: 2 (lower is better)
Translates to: WVPIPHPLLTPSPSSTLGNRQGC*GPVCHQ
Trigger: CTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTT...GCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGGGACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR CCA 90 bp GGGAATCTCCTGTGGGTAGGCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTCAATCTGGCTGCTCTTaGGGCGGGAGTGGAAGTAGC +
Preference number: 2 (lower is better)
Translates to: GNLLWVGPAERLSGHAGGQSGCS*GGSGSS
Trigger: GCTACTTCCACTCCCGCCCCAAGAGCAGCCAGATTG...ACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGCCTACCCACAGGAGATTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR TCA 90 bp TGGGTCCCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCTCCCACACCCTCTCTTaGCACCTAGCCCTAGCTCCA +
Preference number: 2 (lower is better)
Translates to: WVPIPHPLLTPSPSSTLGSHTLS*HLALAP
Trigger: TGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGA...GCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGGGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR GCA 90 bp CAGGTCCCAGAGTTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGCAGCCCCAATCTGGCTaGTCTTGGGGCGGGAGTGGA +
Preference number: 2 (lower is better)
Translates to: QVPELRCKSLIEPVFLPAQPQSG*SWGGSG
Trigger: TCCACTCCCGCCCCAAGAGCAGCCAGATTGGGGCTG...CGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAACTCTGGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR GCA 90 bp AGCTTTGGCCAGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCCAGCCCCAATCTGGCTaGTCTTGGGGCGGGAGTGGA +
Preference number: 2 (lower is better)
Translates to: SFGQYDSHGNRQGCWGPVQPQSG*SWGGSG
Trigger: TCCACTCCCGCCCCAAGAGCAGCCAGATTGGGGCTG...GACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACTGGCCAAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CCA 90 bp TTTGGCCAGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTTCTTCCTCCCCGCGGTaGGTCATGGGCCCCAAAGGG +
Preference number: 2 (lower is better)
Translates to: FGQYDSHGNRQGCWGPVCSSSPR*VMGPKG
Trigger: CCCTTTGGGGCCCATGACCCACCGCGGGGAGGAAGA...ACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACTGGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR CAA 90 bp GCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGTTTGACCTaGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCA +
Preference number: 2 (lower is better)
Translates to: APPKDYPVMQAVGLT*PELHHLRVQDIATP
Trigger: TGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CCA 90 bp CACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGTCCCAGAGTTAGAAAGAAGGGCCTaGGTCCCAATCCCACACCCT +
Preference number: 2 (lower is better)
Translates to: HPLLTPSPSSTLGQQVPELERRA*VPIPHP
Trigger: AGGGTGTGGGATTGGGACCCAGGCCCTTCTTTCTAA...CTCTGGGACCTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR CCA 90 bp CAGGTCCCAGAGTTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGAACAGACAGGGCTGCTaGGGCCCTGTCTGTCACCAG +
Preference number: 2 (lower is better)
Translates to: QVPELRCKSLIEPVFLPANRQGC*GPVCHQ
Trigger: CTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTT...CGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAACTCTGGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CCA 90 bp CACGCAGGCTTAAGAGGGATAAACAAGGAGAGGGCTGCCCTTGGAGAAGGCCTGAACAGACAGGGCTGCTaGGGCCCTGTCTGTCACCAG +
Preference number: 2 (lower is better)
Translates to: HAGLRGINKERAALGEGLNRQGC*GPVCHQ
Trigger: CTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTT...CAGGCCTTCTCCAAGGGCAGCCCTCTCCTTGTTTATCCCTCTTAAGCCTGCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR-3UTR CCA 90 bp CACGCAGGCTTAAGAGGGATAAACAAGGAGAGGGCTGCCCTTGGAGAAGGCCTGGAAACCCCGTCTCGCTaGGTGTGGTGGCTCATGCCT +
Preference number: 2 (lower is better)
Translates to: HAGLRGINKERAALGEGLETPSR*VWWLMP
Trigger: AGGCATGAGCCACCACACCCAGCGAGACGGGGTTTC...CAGGCCTTCTCCAAGGGCAGCCCTCTCCTTGTTTATCCCTCTTAAGCCTGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR-3UTR TCA 90 bp TCTTGGGGCGGGAGTGGAAGTAGCACTCAGCCTCCTCCTCAGGCAGTTTCTTCATCCCACACCCTCTCTTaGCACCTAGCCCTAGCTCCA +
Preference number: 2 (lower is better)
Translates to: SWGGSGSSTQPPPQAVSSSHTLS*HLALAP
Trigger: TGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGA...TGAAGAAACTGCCTGAGGAGGAGGCTGAGTGCTACTTCCACTCCCGCCCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR TCA 90 bp GCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATCCTTCCACACGCACCTaGCGGTTAAGTGGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: AGGWFDLARTPSPEGTGHPSTRT*RLSGSQ
Trigger: CTGGGAGCCACTTAACCGTCAGGTGCGTGTGGAAGG...ATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR GCA 90 bp TTTGGCCAGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTGGTAACAGACAGGGCTaGTGGGGCCCTGTCTGTCAC +
Preference number: 2 (lower is better)
Translates to: FGQYDSHGNRQGCWGPVCGNRQG*WGPVCH
Trigger: GTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACC...ACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACTGGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR GCA 90 bp GCTAAGTCACGTGCCCAAGTTCCTGCAGGAAGTGGTGGAGCTAAGTTTAAGCCAGGCAGGGGGAGGAACTaGACAGCCCAGACCTGGGAG +
Preference number: 2 (lower is better)
Translates to: AKSRAQVPAGSGGAKFKPGRGRN*TAQTWE
Trigger: CTCCCAGGTCTGGGCTGTGCAGTTCCTCCCCCTGCC...TGGCTTAAACTTAGCTCCACCACTTCCTGCAGGAACTTGGGCACGTGACTTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR-3UTR CCA 90 bp TGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGTGGGTCATGGGCCCCAATTAGAAAGAAGGGCCTaGGTCCCAATCCCACACCCT +
Preference number: 2 (lower is better)
Translates to: CKSLIEPVFLPAVGHGPQLERRA*VPIPHP
Trigger: AGGGTGTGGGATTGGGACCCAGGCCCTTCTTTCTAA...TTGGGGCCCATGACCCACCGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CCA 90 bp ATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAAAGAACAGACAGGGCTGCTaGGGCCCTGTCTGTCACCAG +
Preference number: 2 (lower is better)
Translates to: MTHMVTDRAAGALSVTRKNRQGC*GPVCHQ
Trigger: CTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTT...CTTTCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR CCA 90 bp TCTTGGGGCGGGAGTGGAAGTAGCACTCAGCCTCCTCCTCAGGCAGTTTCTTCACAATCTGGCTGCTCTTaGGGCGGGAGTGGAAGTAGC +
Preference number: 2 (lower is better)
Translates to: SWGGSGSSTQPPPQAVSSQSGCS*GGSGSS
Trigger: GCTACTTCCACTCCCGCCCCAAGAGCAGCCAGATTG...TGAAGAAACTGCCTGAGGAGGAGGCTGAGTGCTACTTCCACTCCCGCCCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CCA 90 bp CAGGTCCCAGAGTTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGCAATCTGGCTGCTCTTaGGGCGGGAGTGGAAGTAGC +
Preference number: 2 (lower is better)
Translates to: QVPELRCKSLIEPVFLPAQSGCS*GGSGSS
Trigger: GCTACTTCCACTCCCGCCCCAAGAGCAGCCAGATTG...CGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAACTCTGGGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CCA 90 bp CCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGCCCAGGATTTTGGCTTaGGCACCTCTTGATCCTGGT +
Preference number: 2 (lower is better)
Translates to: PIPHPLLTPSPSSTLGQQPRILA*APLDPG
Trigger: ACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGG...CTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CCA 90 bp CCCTGTCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTGGTCATGCAGGCGGTTaGTTTGACCTTGCCAGAACT +
Preference number: 2 (lower is better)
Translates to: PCLSPERESHRLLPLEGAGHAGG*FDLART
Trigger: AGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACC...AGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CCA 90 bp CCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGGTCATGCAGGCGGTTaGTTTGACCTTGCCAGAACT +
Preference number: 2 (lower is better)
Translates to: PIPHPLLTPSPSSTLGQQGHAGG*FDLART
Trigger: AGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACC...CTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CCA 90 bp CACGCAGGCTTAAGAGGGATAAACAAGGAGAGGGCTGCCCTTGGAGAAGGCCTGAAGGGGAATCTCCTGTaGGTAGGCCCCGCCGAAAGA +
Preference number: 2 (lower is better)
Translates to: HAGLRGINKERAALGEGLKGNLL*VGPAER
Trigger: TCTTTCGGCGGGGCCTACCCACAGGAGATTCCCCTT...CAGGCCTTCTCCAAGGGCAGCCCTCTCCTTGTTTATCCCTCTTAAGCCTGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
3UTR-3UTR CCA 90 bp GGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTTCTTCCTCCCCGCGGTaGGTCATGGGCCCCAAAGGG +
Preference number: 2 (lower is better)
Translates to: GRRDPGNCNSSRQRLLVPSSSPR*VMGPKG
Trigger: CCCTTTGGGGCCCATGACCCACCGCGGGGAGGAAGA...AGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR TCA 90 bp GCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTTCCCACACCCTCTCTTaGCACCTAGCCCTAGCTCCA +
Preference number: 2 (lower is better)
Translates to: ARTPSPEGTGHSHPRILASHTLS*HLALAP
Trigger: TGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGA...AGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR TCA 90 bp GGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCAGAACTCTGGTGGCTaGCCACAGCCCCAATCTGGC +
Preference number: 2 (lower is better)
Translates to: GWFDLARTPSPEGTGHSHQNSGG*PQPQSG
Trigger: GCCAGATTGGGGCTGTGGTCAGCCACCAGAGTTCTG...GTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR TCA 90 bp CCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTATGCAGGCGGTTGGTTTaGCCTTGCCAGAACTCCATC +
Preference number: 2 (lower is better)
Translates to: PVMQAVGLTLPELHHLRVCRRLV*PCQNSI
Trigger: GATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCA...TACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR TCA 90 bp CAGGTCCCAGAGTTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGTGCAGGCGGTTGGTTTaGCCTTGCCAGAACTCCATC +
Preference number: 2 (lower is better)
Translates to: QVPELRCKSLIEPVFLPACRRLV*PCQNSI
Trigger: GATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCA...CGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAACTCTGGGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR TCA 90 bp CTGGGCCAGCAGGTCCCAGAGTTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTGGTGGGATGTCTTTaGAGCCCCCTTTTCCCACGG +
Preference number: 2 (lower is better)
Translates to: LGQQVPELRCKSLIEPVFLVGCL*SPLFPR
Trigger: CCGTGGGAAAAGGGGGCTTCAAAGACATCCCACCAG...GAAGACTGGCTCTATGAGAGACTTGCACCTTAACTCTGGGACCTGCTGGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641323.1
3UTR-3UTR TCA 90 bp AGCCATCAGGACAGGGAGAGGAGGCCTCCGGCATGCAGGGAAAAGGCAGGAGAGCAAAGTGAGACTGGGTaGTTTCTCTCACCCACAGAT +
Preference number: 2 (lower is better)
Translates to: SHQDRERRPPACREKAGEQSETG*FLSPTD
Trigger: ATCTGTGGGTGAGAGAAATCACCCAGTCTCACTTTG...CTCTCCTGCCTTTTCCCTGCATGCCGGAGGCCTCCTCTCCCTGTCCTGATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR-3UTR GCA 90 bp GGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTGGCTGGGCAGGGGGAGGAACTaGACAGCCCAGACCTGGGAG +
Preference number: 2 (lower is better)
Translates to: GNCNSSRQRLLVPIVSWLGRGRN*TAQTWE
Trigger: CTCCCAGGTCTGGGCTGTGCAGTTCCTCCCCCTGCC...CAGCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR CCA 90 bp CCCTGTCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTGCAGGCAGAGGCTTTTaGTTCCTATTGTTTCCTGGC +
Preference number: 2 (lower is better)
Translates to: PCLSPERESHRLLPLEGAAGRGF*FLLFPG
Trigger: GCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGC...AGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR CCA 90 bp TCTCCTGTGGGTAGGCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGTTCACCTGACGGTTAAGTaGCTCCCAGTAGAAGACAAG +
Preference number: 2 (lower is better)
Translates to: SPVGRPRRKTIRSCRRLVHLTVK*LPVEDK
Trigger: CTTGTCTTCTACTGGGAGCCACTTAACCGTCAGGTG...AACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGCCTACCCACAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CCA 90 bp AAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGTGGGTCATGGGCCCACCTGACGGTTAAGTaGCTCCCAGTAGAAGACAAG +
Preference number: 2 (lower is better)
Translates to: KVQVSHRASLPPRGGSWAHLTVK*LPVEDK
Trigger: CTTGTCTTCTACTGGGAGCCACTTAACCGTCAGGTG...GGCCCATGACCCACCGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CCA 90 bp TTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGTGGGTCATGGGGCCACCCCAGGATTTTaGCTTGGGCACCTCTTGATC +
Preference number: 2 (lower is better)
Translates to: LRCKSLIEPVFLPAVGHGATPGF*LGHLLI
Trigger: GATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGC...CCCATGACCCACCGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CCA 90 bp GGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCAAGGGGAATCTCCTGTaGGTAGGCCCCGCCGAAAGA +
Preference number: 2 (lower is better)
Translates to: GGWFDLARTPSPEGTGHSKGNLL*VGPAER
Trigger: TCTTTCGGCGGGGCCTACCCACAGGAGATTCCCCTT...GCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR TCA 90 bp AGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTTGGTCCCACACCCTCTCTTaGCACCTAGCCCTAGCTCCA +
Preference number: 2 (lower is better)
Translates to: RTPSPEGTGHSHPRILAWSHTLS*HLALAP
Trigger: TGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGA...CCAAGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR TCA 90 bp CCCTGTCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTCCTGGCTGCTATGAATaGCTTGGCTTTAATGACTCC +
Preference number: 2 (lower is better)
Translates to: PCLSPERESHRLLPLEGAPGCYE*LGFNDS
Trigger: GGAGTCATTAAAGCCAAGTCATTCATAGCAGCCAGG...AGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR TCA 90 bp CTTGGAGAAGGCCTGCGGATAATAGTGACTGAGGCACAGGTCCATGCAGGGGAATGGTTCAATCATCTCTaGGGGTGGGACCCAGGCATC +
Preference number: 2 (lower is better)
Translates to: LGEGLRIIVTEAQVHAGEWFNHL*GWDPGI
Trigger: GATGCCTGGGTCCCACCCTCAGAGATGATTGAACCA...TTCCCCTGCATGGACCTGTGCCTCAGTCACTATTATCCGCAGGCCTTCTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR-3UTR TCA 90 bp GCTCTTCTCCATAGCCAGCAGGTTGCTTGCTCATCCAGTCTGTCCCTGGTTAGCTGGTTCAATCATCTCTaGGGGTGGGACCCAGGCATC +
Preference number: 2 (lower is better)
Translates to: ALLHSQQVACSSSLSLVSWFNHL*GWDPGI
Trigger: GATGCCTGGGTCCCACCCTCAGAGATGATTGAACCA...GCTAACCAGGGACAGACTGGATGAGCAAGCAACCTGCTGGCTATGGAGAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR-3UTR GCA 90 bp GTCCTGAAGATAAGGGGTAGGGAGGGAAATGGGTTGAGTTTAGAAAGAAGGGCCCAGCCCCAATCTGGCTaGTCTTGGGGCGGGAGTGGA +
Preference number: 2 (lower is better)
Translates to: VLKIRGREGNGLSLERRAQPQSG*SWGGSG
Trigger: TCCACTCCCGCCCCAAGAGCAGCCAGATTGGGGCTG...GGCCCTTCTTTCTAAACTCAACCCATTTCCCTCCCTACCCCTTATCTTCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR GCA 90 bp GCTCTTCTCCATAGCCAGCAGGTTGCTTGCTCATCCAGTCTGTCCCTGGTTAGCAGCCAGCAGGTTGCTTaGTCATCCAGTCTGTCCCTG +
Preference number: 2 (lower is better)
Translates to: ALLHSQQVACSSSLSLVSSQQVA*SSSLSL
Trigger: CAGGGACAGACTGGATGAGCAAGCAACCTGCTGGCT...GCTAACCAGGGACAGACTGGATGAGCAAGCAACCTGCTGGCTATGGAGAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR-3UTR GCA 90 bp TCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTGCAAGAGCCAAACCCTaGAGGCCCTGGGAAAGATTA +
Preference number: 2 (lower is better)
Translates to: SVTRKGVTPAATPRGSYPARAKP*RPWERL
Trigger: TAATCTTTCCCAGGGCCTGCAGGGTTTGGCTCTTGC...AGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR-3UTR CCA 90 bp GCAGGGTCAGATTCAGTGGGTCTGGGGTCTGAATCTCTAAGGCGCTGCCAAGTGTTTGGGAGGCTGAGGTaGGTGGATCACAAGGTCAAG +
Preference number: 2 (lower is better)
Translates to: AGSDSVGLGSESLRRCQVFGRLR*VDHKVK
Trigger: CTTGACCTTGTGATCCACCCACCTCAGCCTCCCAAA...CACTTGGCAGCGCCTTAGAGATTCAGACCCCAGACCCACTGAATCTGACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR-3UTR TCA 90 bp CTTGGAGAAGGCCTGCGGATAATAGTGACTGAGGCACAGGTCCATGCAGGGGAACCTATGTCAGGACACTaGACAGCCTCCTCAAACCAG +
Preference number: 2 (lower is better)
Translates to: LGEGLRIIVTEAQVHAGEPMSGH*TASSNQ
Trigger: CTGGTTTGAGGAGGCTGTTCAGTGTCCTGACATAGG...TTCCCCTGCATGGACCTGTGCCTCAGTCACTATTATCCGCAGGCCTTCTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
3UTR-3UTR TCA 90 bp TTTGGCCAGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCCTATGTCAGGACACTaGACAGCCTCCTCAAACCAG +
Preference number: 2 (lower is better)
Translates to: FGQYDSHGNRQGCWGPVCPMSGH*TASSNQ
Trigger: CTGGTTTGAGGAGGCTGTTCAGTGTCCTGACATAGG...ACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACTGGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
3UTR-3UTR GCA 90 bp GGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTGGCTGGGTAACAGACAGGGCTaGTGGGGCCCTGTCTGTCAC +
Preference number: 2 (lower is better)
Translates to: GNCNSSRQRLLVPIVSWLGNRQG*WGPVCH
Trigger: GTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACC...CAGCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR CCA 90 bp ATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAAAGTTAGAAAGAAGGGCCTaGGTCCCAATCCCACACCCT +
Preference number: 2 (lower is better)
Translates to: MTHMVTDRAAGALSVTRKLERRA*VPIPHP
Trigger: AGGGTGTGGGATTGGGACCCAGGCCCTTCTTTCTAA...CTTTCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR CCA 90 bp GTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGCCCAGGATTTTGGCTTaGGCACCTCTTGATCCTGGT +
Preference number: 2 (lower is better)
Translates to: VMQAVGLTLPELHHLRVQPRILA*APLDPG
Trigger: ACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGG...CTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CCA 90 bp AGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGACCCAGGATTTTGGCTTaGGCACCTCTTGATCCTGGT +
Preference number: 2 (lower is better)
Translates to: SMTHMVTDRAAGALSVTRPRILA*APLDPG
Trigger: ACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGG...TCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CCA 90 bp AGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGACCAGACACATGGCATTaGCTTCCCCTATGTCAGGAC +
Preference number: 2 (lower is better)
Translates to: SMTHMVTDRAAGALSVTRPDTWH*LPLCQD
Trigger: GTCCTGACATAGGGGAAGCCAATGCCATGTGTCTGG...TCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
3UTR-3UTR TCA 90 bp GCTCTTCTCCATAGCCAGCAGGTTGCTTGCTCATCCAGTCTGTCCCTGGTTAGCTCAAGGGAGGTCAGATaGGTCTCCTCAAATGCCCAT +
Preference number: 2 (lower is better)
Translates to: ALLHSQQVACSSSLSLVSSREVR*VSSNAH
Trigger: ATGGGCATTTGAGGAGACTCATCTGACCTCCCTTGA...GCTAACCAGGGACAGACTGGATGAGCAAGCAACCTGCTGGCTATGGAGAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641323.1
3UTR-3UTR CCA 90 bp GGGTTTTCCATCTCTGGTGCAGGTAGCCAGACACATGGCATTGGCTTCCCCTATTTAGAAAGAAGGGCCTaGGTCCCAATCCCACACCCT +
Preference number: 2 (lower is better)
Translates to: GFSISGAGSQTHGIGFPYLERRA*VPIPHP
Trigger: AGGGTGTGGGATTGGGACCCAGGCCCTTCTTTCTAA...ATAGGGGAAGCCAATGCCATGTGTCTGGCTACCTGCACCAGAGATGGAAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
3UTR-3UTR CCA 90 bp CACGCAGGCTTAAGAGGGATAAACAAGGAGAGGGCTGCCCTTGGAGAAGGCCTGATCTTCCTGTCCTATTaGTACCAGCACATGAAGCCC +
Preference number: 2 (lower is better)
Translates to: HAGLRGINKERAALGEGLIFLSY*YQHMKP
Trigger: GGGCTTCATGTGCTGGTACCAATAGGACAGGAAGAT...CAGGCCTTCTCCAAGGGCAGCCCTCTCCTTGTTTATCCCTCTTAAGCCTGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR-3UTR CCA 90 bp GCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTCACCTGACGGTTAAGTaGCTCCCAGTAGAAGACAAG +
Preference number: 2 (lower is better)
Translates to: ARTPSPEGTGHSHPRILAHLTVK*LPVEDK
Trigger: CTTGTCTTCTACTGGGAGCCACTTAACCGTCAGGTG...AGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR TCA 90 bp TTTGGCCAGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCCTGGCTGCTATGAATaGCTTGGCTTTAATGACTCC +
Preference number: 2 (lower is better)
Translates to: FGQYDSHGNRQGCWGPVCPGCYE*LGFNDS
Trigger: GGAGTCATTAAAGCCAAGTCATTCATAGCAGCCAGG...ACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACTGGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR TCA 90 bp CAGGTCCCAGAGTTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGCAGATTTGTGAGTCTTaGGAAATGCATGCTTGGCTG +
Preference number: 2 (lower is better)
Translates to: QVPELRCKSLIEPVFLPAQICES*EMHAWL
Trigger: CAGCCAAGCATGCATTTCTCAAGACTCACAAATCTG...CGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAACTCTGGGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR-3UTR GCA 90 bp GGATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTGAACCCATCTTCATTTaGGTTTCCCCGGAACTCCTC +
Preference number: 2 (lower is better)
Translates to: GSREGEILGIAIAAGRGFEPIFI*VSPELL
Trigger: GAGGAGTTCCGGGGAAACGCAAATGAAGATGGGTTC...AAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641323.1
3UTR CAA 90 bp GGCTGGCATGGACTCAGGGAGGTTTACTCATTTTGGATTCATTCATaGAATGCACGCGAAGTGCCCACTCTGGGTCTGACAACAGGAGAC +
Preference number: 2 (lower is better)
Translates to: GWHGLREVYSFWIHS*NAREVPTLGLTTGD
Trigger: GTCTCCTGTTGTCAGACCCAGAGTGGGCACTTCGCGTGCATTCAATGAATGAATCCAAAATGAGTAAACCTCCCTGAGTCCATGCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR-3UTR TCA 90 bp CATAAACGGCACAGCCTACGGTACAAGAAAAAGGGCAAGGTAGGTAAGGGCACCCAACAGGCAGTTCTTTaGTCCTGGCTTAGTCACAGC +
Preference number: 2 (lower is better)
Translates to: HKRHSLRYKKKGKVGKGTQQAVL*SWLSHS
Trigger: GCTGTGACTAAGCCAGGATCAAAGAACTGCCTGTTG...GGTGCCCTTACCTACCTTGCCCTTTTTCTTGTACCGTAGGCTGTGCCGTTTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000642017.2
3UTR-3UTR GCA 90 bp AGAGTTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGTGGGTCACCCATTACGAAAGGCTaGCTTTTGAACCCATCTTCA +
Preference number: 2 (lower is better)
Translates to: RVKVQVSHRASLPPRGGSPITKG*LLNPSS
Trigger: TGAAGATGGGTTCAAAAGGCAGCCTTTCGTAATGGG...TGACCCACCGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641323.1
3UTR-3UTR CCA 90 bp CTCATTTTTCTTTCTCAGATACTCCCGATCAGGGATCACAGAACTCTGGTGGCTAAGGGGAATCTCCTGTaGGTAGGCCCCGCCGAAAGA +
Preference number: 2 (lower is better)
Translates to: LIFLSQILPIRDHRTLVAKGNLL*VGPAER
Trigger: TCTTTCGGCGGGGCCTACCCACAGGAGATTCCCCTT...AGCCACCAGAGTTCTGTGATCCCTGATCGGGAGTATCTGAGAAAGAAAAATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CCA 90 bp GACACACATCACTTACTCATAAACGGCACAGCCTACGGTACAAGAAAAAGGGCAAAGGGGAATCTCCTGTaGGTAGGCCCCGCCGAAAGA +
Preference number: 2 (lower is better)
Translates to: DTHHLLINGTAYGTRKRAKGNLL*VGPAER
Trigger: TCTTTCGGCGGGGCCTACCCACAGGAGATTCCCCTT...TGCCCTTTTTCTTGTACCGTAGGCTGTGCCGTTTATGAGTAAGTGATGTGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641323.1
3UTR-3UTR GCA 90 bp AGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCGTCTTGAGAAATGCATaGTTGGCTGGCATGGACTCA +
Preference number: 2 (lower is better)
Translates to: REGEILGIAIAAGRGFWFVLRNA*LAGMDS
Trigger: TGAGTCCATGCCAGCCAAGCATGCATTTCTCAAGAC...GAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR-3UTR CCA 90 bp GGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTAAAATTAGTTGGGTGTaGTGGCGTGTGCCTGTAGTC +
Preference number: 2 (lower is better)
Translates to: GRRDPGNCNSSRQRLLVPKISWV*WRVPVV
Trigger: GACTACAGGCACACGCCACCACACCCAACTAATTTT...AGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR CCA 90 bp TGCCCAGGCTGCATTCATATCATAGTAGAGACAGGGTTTTGCCATGCTGGCCAGAGGAGGTCTCAACCTTaGCTGCACAGAATTATCTGG +
Preference number: 2 (lower is better)
Translates to: CPGCIHIIVETGFCHAGQRRSQP*LHRIIW
Trigger: CCAGATAATTCTGTGCAGCCAAGGTTGAGACCTCCT...CTGGCCAGCATGGCAAAACCCTGTCTCTACTATGATATGAATGCAGCCTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR-3UTR CCA 90 bp ACTTCTAGACACACACACAGACACACATCACTTACTCATAAACGGCACAGCCTAGGAGAGGGCTGCCCTTaGAGAAGGCCTGCGGATAAT +
Preference number: 2 (lower is better)
Translates to: TSRHTHRHTSLTHKRHSLGEGCP*RRPADN
Trigger: ATTATCCGCAGGCCTTCTCCAAGGGCAGCCCTCTCC...TAGGCTGTGCCGTTTATGAGTAAGTGATGTGTGTCTGTGTGTGTGTCTAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000642017.2
3UTR CAA 90 bp GAAATGCATGCTTGGCTGGCATGGACTCAGGGAGGTTTACTCATTTaGGATTCATTCATTGAATGCACGCGAAGTGCCCACTCTGGGTCT +
Preference number: 2 (lower is better)
Translates to: EMHAWLAWTQGGLLI*DSFIECTRSAHSGS
Trigger: AGACCCAGAGTGGGCACTTCGCGTGCATTCAATGAATGAATCCAAAATGAGTAAACCTCCCTGAGTCCATGCCAGCCAAGCATGCATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR-3UTR CCA 90 bp AAGGCAGCAATCAGTAGGGGAAGTGCTATAAAAATATACTATCCCGGCCAAGCGTTAGAAAGAAGGGCCTaGGTCCCAATCCCACACCCT +
Preference number: 2 (lower is better)
Translates to: KAAISRGSAIKIYYPGQALERRA*VPIPHP
Trigger: AGGGTGTGGGATTGGGACCCAGGCCCTTCTTTCTAA...CGCTTGGCCGGGATAGTATATTTTTATAGCACTTCCCCTACTGATTGCTGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR-3UTR CCA 90 bp GACACACATCACTTACTCATAAACGGCACAGCCTACGGTACAAGAAAAAGGGCAGATGCTCCTGGCTTGTaGACCACCCTGTGTATAGCA +
Preference number: 2 (lower is better)
Translates to: DTHHLLINGTAYGTRKRADAPGL*TTLCIA
Trigger: TGCTATACACAGGGTGGTCCACAAGCCAGGAGCATC...TGCCCTTTTTCTTGTACCGTAGGCTGTGCCGTTTATGAGTAAGTGATGTGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000642017.2
3UTR-3UTR TCA 90 bp AAAATCTTCCTGTCCTATTGGTACCAGCACATGAAGCCCTTCTACAAAATTCCTTCCCACACCCTCTCTTaGCACCTAGCCCTAGCTCCA +
Preference number: 2 (lower is better)
Translates to: KIFLSYWYQHMKPFYKIPSHTLS*HLALAP
Trigger: TGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGA...AGGAATTTTGTAGAAGGGCTTCATGTGCTGGTACCAATAGGACAGGAAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR-3UTR TCA 90 bp GGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTGGCTGATTGACAAAACAATCTaGTTGGCCAGGTTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: GNCNSSRQRLLVPIVSWLIDKTI*LARLAQ
Trigger: CTGAGCCAACCTGGCCAATCAGATTGTTTTGTCAAT...CAGCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR TCA 90 bp GTCCTGAAGATAAGGGGTAGGGAGGGAAATGGGTTGAGTTTAGAAAGAAGGGCCATTGACAAAACAATCTaGTTGGCCAGGTTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: VLKIRGREGNGLSLERRAIDKTI*LARLAQ
Trigger: CTGAGCCAACCTGGCCAATCAGATTGTTTTGTCAAT...GGCCCTTCTTTCTAAACTCAACCCATTTCCCTCCCTACCCCTTATCTTCAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR GCA 90 bp ATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAAGGCAGGGGGAGGAACTaGACAGCCCAGACCTGGGAG +
Preference number: 2 (lower is better)
Translates to: MTPKVLDLSSSNFKLLTKGRGRN*TAQTWE
Trigger: CTCCCAGGTCTGGGCTGTGCAGTTCCTCCCCCTGCC...TTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR GCA 90 bp CTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGAGGCTGGTTAGAAAGTaGATTCATTCATTTATGGCA +
Preference number: 2 (lower is better)
Translates to: LSGHAGGWFDLARTPSPERLVRK*IHSFMA
Trigger: TGCCATAAATGAATGAATGCACTTTCTAACCAGCCT...CTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR-3UTR GCA 90 bp TATTGGTACCAGCACATGAAGCCCTTCTACAAAATTCCTGACGGACTGGGAATAAGAGATCCTGGGAATTaGAATAGCAGCAGGCAGAGG +
Preference number: 2 (lower is better)
Translates to: YWYQHMKPFYKIPDGLGIRDPGN*NSSRQR
Trigger: CCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCT...TATTCCCAGTCCGTCAGGAATTTTGTAGAAGGGCTTCATGTGCTGGTACCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR-3UTR CCA 90 bp ACACACAGACACACATCACTTACTCATAAACGGCACAGCCTACGGTACAAGAAAAACATTTACCCAGCCTaGCTCTTCTCCATAGCCAGC +
Preference number: 2 (lower is better)
Translates to: THRHTSLTHKRHSLRYKKNIYPA*LFSIAS
Trigger: GCTGGCTATGGAGAAGAGCCAGGCTGGGTAAATGTT...TTTCTTGTACCGTAGGCTGTGCCGTTTATGAGTAAGTGATGTGTGTCTGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000642017.2
3UTR-3UTR CCA 90 bp ATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTAAACCCTGCAGGCCCTaGGAAAGATTACTAGCTCTT +
Preference number: 2 (lower is better)
Translates to: ILGIAIAAGRGFWFLLFPKPCRP*ERLLAL
Trigger: AAGAGCTAGTAATCTTTCCCAGGGCCTGCAGGGTTT...AGGAAACAATAGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR-3UTR TCA 90 bp AAGGCAGCAATCAGTAGGGGAAGTGCTATAAAAATATACTATCCCGGCCAAGCGATTGACAAAACAATCTaGTTGGCCAGGTTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: KAAISRGSAIKIYYPGQAIDKTI*LARLAQ
Trigger: CTGAGCCAACCTGGCCAATCAGATTGTTTTGTCAAT...CGCTTGGCCGGGATAGTATATTTTTATAGCACTTCCCCTACTGATTGCTGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR-3UTR TCA 90 bp ACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAACAACAGAACTCTGGTGGCTaGCCACAGCCCCAATCTGGC +
Preference number: 2 (lower is better)
Translates to: TPKVLDLSSSNFKLLTKQQNSGG*PQPQSG
Trigger: GCCAGATTGGGGCTGTGGTCAGCCACCAGAGTTCTG...TTGTTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR CAA 90 bp GCAGAGGCTTTTGGTTCCTATTGTTTCCTGGCTGCTATGAATGACTaGGCTTTAATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAAAT +
Preference number: 2 (lower is better)
Translates to: AEAFGSYCFLAAMND*ALMTPKVLDLSSSN
Trigger: ATTTGAACTGGAGAGATCCAGAACCTTGGGAGTCATTAAAGCCAAGTCATTCATAGCAGCCAGGAAACAATAGGAACCAAAAGCCTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR TCA 90 bp GACACACATCACTTACTCATAAACGGCACAGCCTACGGTACAAGAAAAAGGGCATGGGGGAAAAACCAATaGACTAGGAATTATCAGCAG +
Preference number: 2 (lower is better)
Translates to: DTHHLLINGTAYGTRKRAWGKNQ*TRNYQQ
Trigger: CTGCTGATAATTCCTAGTTCATTGGTTTTTCCCCCA...TGCCCTTTTTCTTGTACCGTAGGCTGTGCCGTTTATGAGTAAGTGATGTGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000642017.2
3UTR-3UTR TCA 90 bp ATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAAGGGGCTGAGTCTGAGTaGGAGTCAAGGAAGGCCTTC +
Preference number: 2 (lower is better)
Translates to: MTPKVLDLSSSNFKLLTKGAESE*ESRKAF
Trigger: GAAGGCCTTCCTTGACTCTCACTCAGACTCAGCCCC...TTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR-3UTR CCA 90 bp GACACACATCACTTACTCATAAACGGCACAGCCTACGGTACAAGAAAAAGGGCAAATACAAAAATTAGTTaGGTGTGGTGGCGTGTGCCT +
Preference number: 2 (lower is better)
Translates to: DTHHLLINGTAYGTRKRANTKIS*VWWRVP
Trigger: AGGCACACGCCACCACACCCAACTAATTTTTGTATT...TGCCCTTTTTCTTGTACCGTAGGCTGTGCCGTTTATGAGTAAGTGATGTGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000642017.2
3UTR-3UTR CCA 90 bp ATTAGAGTCCAGCTCTTTTCCTTTTCGACTCTCGAAGTTAGTGAAGAAGCGGAAAGCAAACTGTTTCACTaGGTCAAGGGAGGTCAGATG +
Preference number: 2 (lower is better)
Translates to: IRVQLFSFSTLEVSEEAESKLFH*VKGGQM
Trigger: CATCTGACCTCCCTTGACCCAGTGAAACAGTTTGCT...TTCCGCTTCTTCACTAACTTCGAGAGTCGAAAAGGAAAAGAGCTGGACTCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641323.1
3UTR-3UTR TCA 90 bp ACACACAGACACACATCACTTACTCATAAACGGCACAGCCTACGGTACAAGAAAATTGGTACCAGCACATaGAGCCCTTCTACAAAATTC +
Preference number: 2 (lower is better)
Translates to: THRHTSLTHKRHSLRYKKIGTST*SPSTKF
Trigger: GAATTTTGTAGAAGGGCTTCATGTGCTGGTACCAAT...TTTCTTGTACCGTAGGCTGTGCCGTTTATGAGTAAGTGATGTGTGTCTGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000642017.2
3UTR-3UTR CCA 90 bp TATTGGTACCAGCACATGAAGCCCTTCTACAAAATTCCTGACGGACTGGGAATAAATACAAAAATTAGTTaGGTGTGGTGGCGTGTGCCT +
Preference number: 2 (lower is better)
Translates to: YWYQHMKPFYKIPDGLGINTKIS*VWWRVP
Trigger: AGGCACACGCCACCACACCCAACTAATTTTTGTATT...TATTCCCAGTCCGTCAGGAATTTTGTAGAAGGGCTTCATGTGCTGGTACCAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR CAA 90 bp ATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATaGACAAAACAATCTGATTGGCCAGGTTGGCTCAGGTGCATATGC +
Preference number: 2 (lower is better)
Translates to: MTPKVLDLSSSNFKL*TKQSDWPGWLRCIC
Trigger: GCATATGCACCTGAGCCAACCTGGCCAATCAGATTGTTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR CAA 90 bp AGCAGAGATAAAACAGAGCAGCCTCCACTCCTACAGAGCTTACTGTaGAGCAGAGGAGACAAATATCAGTTACATAATCACCCAAACAAA +
Preference number: 2 (lower is better)
Translates to: SRDKTEQPPLLQSLL*SRGDKYQLHNHPNK
Trigger: TTTGTTTGGGTGATTATGTAACTGATATTTGTCTCCTCTGCTCAACAGTAAGCTCTGTAGGAGTGGAGGCTGCTCTGTTTTATCTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR-3UTR TCA 90 bp AAAATCTTCCTGTCCTATTGGTACCAGCACATGAAGCCCTTCTACAAAATTCCTATTGACAAAACAATCTaGTTGGCCAGGTTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: KIFLSYWYQHMKPFYKIPIDKTI*LARLAQ
Trigger: CTGAGCCAACCTGGCCAATCAGATTGTTTTGTCAAT...AGGAATTTTGTAGAAGGGCTTCATGTGCTGGTACCAATAGGACAGGAAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR-3UTR CCA 90 bp ACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAACAAGGTCATGCAGGCGGTTaGTTTGACCTTGCCAGAACT +
Preference number: 2 (lower is better)
Translates to: TPKVLDLSSSNFKLLTKQGHAGG*FDLART
Trigger: AGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACC...TTGTTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CCA 90 bp TCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAACAATCGCAGGCAGAGGCTTTTaGTTCCTATTGTTTCCTGGC +
Preference number: 2 (lower is better)
Translates to: SQGSGSLQFKFQIIDKTIAGRGF*FLLFPG
Trigger: GCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGC...GATTGTTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR TCA 90 bp ATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAACCTGGCTGCTATGAATaGCTTGGCTTTAATGACTCC +
Preference number: 2 (lower is better)
Translates to: MTPKVLDLSSSNFKLLTKPGCYE*LGFNDS
Trigger: GGAGTCATTAAAGCCAAGTCATTCATAGCAGCCAGG...TTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR TCA 72 bp GATACTCCCGATCAGGGATCACAGAACTCTGGTGGCTaGCCACAGCCCCAATCTGGCTGCTCTTGGGGCGGG +
Preference number: 3 (lower is better)
Translates to: DTPDQGSQNSGG*PQPQSGCSWGG
Trigger: CCCGCCCCAAGAGCAGCCAGATTGGGGCTGTGGTCAGCCACCAGAGTTCTGTGATCCCTGATCGGGAGTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CAA 90 bp TGGGTCCCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCATCCCACACCCTCTCTaGACACCTAGCCCTAGCTCC +
Preference number: 3 (lower is better)
Translates to: WVPIPHPLLTPSPSSTLGIPHPL*TPSPSS
Trigger: GGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGAT...GCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGGGACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR CAA 90 bp GGCCTCCGGCATGCAGGGAAAAGGCAGGAGAGCTGTAGTGCGCAGGCCCACAGCAGCAGGCAGAGGCTTTaGGTTCCTATTGTTTCCTGG +
Preference number: 3 (lower is better)
Translates to: GLRHAGKRQESCSAQAHSSRQRL*VPIVSW
Trigger: CCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCT...GCTGTGGGCCTGCGCACTACAGCTCTCCTGCCTTTTCCCTGCATGCCGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR-3UTR CAA 90 bp CCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGTCCCATGGCTTGGGCACCTCTaGATCCTGGTAGAGCTGTTC +
Preference number: 3 (lower is better)
Translates to: PHPLLTPSPSSTLGQQVPWLGHL*ILVELF
Trigger: GAACAGCTCTACCAGGATCAAGAGGTGCCCAAGCCA...TGGGACCTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR CCA 72 bp GGCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTTaGTTTGACCTTGCCAGAACTCCATCACCTGAGGGT +
Preference number: 3 (lower is better)
Translates to: GPAERLSGHAGG*FDLARTPSPEG
Trigger: ACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CAA 90 bp TGGGTCCCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCTGGCTTGGGCACCTCTaGATCCTGGTAGAGCTGTTC +
Preference number: 3 (lower is better)
Translates to: WVPIPHPLLTPSPSSTLGWLGHL*ILVELF
Trigger: GAACAGCTCTACCAGGATCAAGAGGTGCCCAAGCCA...GCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGGGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CAA 90 bp TGGGTCCCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCGCGGTTGGTTTGACCTaGCCAGAACTCCATCACCTG +
Preference number: 3 (lower is better)
Translates to: WVPIPHPLLTPSPSSTLGAVGLT*PELHHL
Trigger: CAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGC...GCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGGGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CAA 90 bp TGGGTCCCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCATGCAGGCGGTTGGTTaGACCTTGCCAGAACTCCAT +
Preference number: 3 (lower is better)
Translates to: WVPIPHPLLTPSPSSTLGMQAVG*TLPELH
Trigger: ATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCAT...GCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGGGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR TCA 72 bp GGCTGCCCTTGGAGAAGGCCTGCGGATAATAGTGACTaGGGCACAGGTCCATGCAGGGGAAGGAAGCACAGT +
Preference number: 3 (lower is better)
Translates to: GCPWRRPADNSD*GTGPCRGRKHS
Trigger: ACTGTGCTTCCTTCCCCTGCATGGACCTGTGCCTCAGTCACTATTATCCGCAGGCCTTCTCCAAGGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR-3UTR CAA 90 bp GACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGATCCCACACCCTCTCTaGACACCTAGCCCTAGCTCC +
Preference number: 3 (lower is better)
Translates to: DYPVMQAVGLTLPELHHLIPHPL*TPSPSS
Trigger: GGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGAT...CAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CAA 90 bp GCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTATCCCACACCCTCTCTaGACACCTAGCCCTAGCTCC +
Preference number: 3 (lower is better)
Translates to: ARTPSPEGTGHSHPRILAIPHPL*TPSPSS
Trigger: GGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGAT...AGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CAA 90 bp AGCTTTGGCCAGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCAGCCACCCCAGGATTTaGGCTTGGGCACCTCTTGAT +
Preference number: 3 (lower is better)
Translates to: SFGQYDSHGNRQGCWGPVSHPRI*AWAPLD
Trigger: ATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGCT...GACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACTGGCCAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CAA 90 bp GCAGGGTCAGATTCAGTGGGTCTGGGGTCTGAATCTCTAAGGCGCTGCCAAGTGGCTGATGCTCCTGGCTaGTGGACCACCCTGTGTATA +
Preference number: 3 (lower is better)
Translates to: AGSDSVGLGSESLRRCQVADAPG*WTTLCI
Trigger: TATACACAGGGTGGTCCACAAGCCAGGAGCATCAGC...CACTTGGCAGCGCCTTAGAGATTCAGACCCCAGACCCACTGAATCTGACCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR-3UTR CAA 90 bp CAGGTCCCAGAGTTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGCCAGACACATGGCATaGGCTTCCCCTATGTCAGGA +
Preference number: 3 (lower is better)
Translates to: QVPELRCKSLIEPVFLPAARHMA*ASPMSG
Trigger: TCCTGACATAGGGGAAGCCAATGCCATGTGTCTGGC...CGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAACTCTGGGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
3UTR-3UTR CAA 90 bp AGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTTGGATCCCACACCCTCTCTaGACACCTAGCCCTAGCTCC +
Preference number: 3 (lower is better)
Translates to: RTPSPEGTGHSHPRILAWIPHPL*TPSPSS
Trigger: GGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGAT...CCAAGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CAA 90 bp ATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAAAGTGGCTTGGGCACCTCTaGATCCTGGTAGAGCTGTTC +
Preference number: 3 (lower is better)
Translates to: MTHMVTDRAAGALSVTRKWLGHL*ILVELF
Trigger: GAACAGCTCTACCAGGATCAAGAGGTGCCCAAGCCA...CTTTCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CAA 90 bp GTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGTGGCTTGGGCACCTCTaGATCCTGGTAGAGCTGTTC +
Preference number: 3 (lower is better)
Translates to: VMQAVGLTLPELHHLRVQWLGHL*ILVELF
Trigger: GAACAGCTCTACCAGGATCAAGAGGTGCCCAAGCCA...CTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CAA 90 bp ATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACGCGGTTGGTTTGACCTaGCCAGAACTCCATCACCTG +
Preference number: 3 (lower is better)
Translates to: MQAVGLTLPELHHLRVQDAVGLT*PELHHL
Trigger: CAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGC...GTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CAA 90 bp CCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTAATGCAGGCGGTTGGTTaGACCTTGCCAGAACTCCAT +
Preference number: 3 (lower is better)
Translates to: PVMQAVGLTLPELHHLRVMQAVG*TLPELH
Trigger: ATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCAT...TACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CAA 90 bp GTCCCAGAGTTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGTGATGCAGGCGGTTGGTTaGACCTTGCCAGAACTCCAT +
Preference number: 3 (lower is better)
Translates to: VPELRCKSLIEPVFLPAVMQAVG*TLPELH
Trigger: ATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCAT...CACCGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAACTCTGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR GCA 72 bp GATTCAGTGGGTCTGGGGTCTGAATCTCTAAGGCGCTaGCAAGTGATGCTGATGCTCCTGGCTTGTGGACCA +
Preference number: 3 (lower is better)
Translates to: DSVGLGSESLRR*QVMLMLLACGP
Trigger: TGGTCCACAAGCCAGGAGCATCAGCATCACTTGGCAGCGCCTTAGAGATTCAGACCCCAGACCCACTGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR-3UTR CAA 90 bp TCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAGGGAGGGAAATGGGTaGAGTTTAGAAAGAAGGGCC +
Preference number: 3 (lower is better)
Translates to: SVTRKGVTPAATPRGSYPREGNG*SLERRA
Trigger: GGCCCTTCTTTCTAAACTCAACCCATTTCCCTCCCT...AGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR GCA 72 bp AGGCAGGAGAGCTGTAGTGCGCAGGCCCACAGCAGATaGACCCACCGTAAGAGCTCATTTAAACCCTCAAAA +
Preference number: 3 (lower is better)
Translates to: RQESCSAQAHSR*THRKSSFKPSK
Trigger: TTTTGAGGGTTTAAATGAGCTCTTACGGTGGGTGCATCTGCTGTGGGCCTGCGCACTACAGCTCTCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR CCA 72 bp GAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTTaGGCACCTCTTGATCCTGGTAGAGCTGTTCCAGTT +
Preference number: 3 (lower is better)
Translates to: EGTGHSHPRILA*APLDPGRAVPV
Trigger: AACTGGAACAGCTCTACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR CCA 72 bp TTTATGGCAAAGAGCACAGCAAGTGCCAAGGCCTCATaGCAGGAGGGCACCTGCACACAGAGAGCAAGTAGA +
Preference number: 3 (lower is better)
Translates to: FMAKSTASAKAS*QEGTCTQRASR
Trigger: TCTACTTGCTCTCTGTGTGCAGGTGCCCTCCTGCCATGAGGCCTTGGCACTTGCTGTGCTCTTTGCCATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR-3UTR CAA 90 bp CTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGAGGGAGGGAAATGGGTaGAGTTTAGAAAGAAGGGCC +
Preference number: 3 (lower is better)
Translates to: LSGHAGGWFDLARTPSPEREGNG*SLERRA
Trigger: GGCCCTTCTTTCTAAACTCAACCCATTTCCCTCCCT...CTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CAA 90 bp GGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCAGGGAGGGAAATGGGTaGAGTTTAGAAAGAAGGGCC +
Preference number: 3 (lower is better)
Translates to: GGWFDLARTPSPEGTGHSREGNG*SLERRA
Trigger: GGCCCTTCTTTCTAAACTCAACCCATTTCCCTCCCT...GCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CAA 90 bp GTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGAGGGAGGGAAATGGGTaGAGTTTAGAAAGAAGGGCC +
Preference number: 3 (lower is better)
Translates to: VMQAVGLTLPELHHLRVQREGNG*SLERRA
Trigger: GGCCCTTCTTTCTAAACTCAACCCATTTCCCTCCCT...CTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CAA 90 bp AGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAAGCAGGCAGAGGCTTTaGGTTCCTATTGTTTCCTGG +
Preference number: 3 (lower is better)
Translates to: SMTHMVTDRAAGALSVTRSRQRL*VPIVSW
Trigger: CCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCT...TCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR CAA 90 bp GGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCAGCAGGCAGAGGCTTTaGGTTCCTATTGTTTCCTGG +
Preference number: 3 (lower is better)
Translates to: GGWFDLARTPSPEGTGHSSRQRL*VPIVSW
Trigger: CCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCT...GCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CAA 90 bp GGCCAGCAGGTCCCAGAGTTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCAGCAGGCAGAGGCTTTaGGTTCCTATTGTTTCCTGG +
Preference number: 3 (lower is better)
Translates to: GQQVPELRCKSLIEPVFLSRQRL*VPIVSW
Trigger: CCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCT...GAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAACTCTGGGACCTGCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR GCA 72 bp CTTGCTCATCCAGTCTGTCCCTGGTTAGCGGGCATGTaGTCAAGGAGAACAAACACAGTTCAGCACAGGACT +
Preference number: 3 (lower is better)
Translates to: LAHPVCPWLAGM*SRRTNTVQHRT
Trigger: AGTCCTGTGCTGAACTGTGTTTGTTCTCCTTGAGCACATGCCCGCTAACCAGGGACAGACTGGATGAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR GCA 72 bp GTGCATTCATTCATTTATGGCAAAGAGCACAGCAAGTaGCAAGGCCTCATGGCAGGAGGGCACCTGCACACA +
Preference number: 3 (lower is better)
Translates to: VHSFIYGKEHSK*QGLMAGGHLHT
Trigger: TGTGTGCAGGTGCCCTCCTGCCATGAGGCCTTGGCACTTGCTGTGCTCTTTGCCATAAATGAATGAATGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR CCA 72 bp ATAGCCAGCAGGTTGCTTGCTCATCCAGTCTGTCCCTaGTTAGCGGGCATGTGCTCAAGGAGAACAAACACA +
Preference number: 3 (lower is better)
Translates to: IASRLLAHPVCP*LAGMCSRRTNT
Trigger: TGTGTTTGTTCTCCTTGAGCACATGCCCGCTAACCAGGGACAGACTGGATGAGCAAGCAACCTGCTGGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR-3UTR CAA 90 bp GGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTGGCTGTGGCTTGGGCACCTCTaGATCCTGGTAGAGCTGTTC +
Preference number: 3 (lower is better)
Translates to: GNCNSSRQRLLVPIVSWLWLGHL*ILVELF
Trigger: GAACAGCTCTACCAGGATCAAGAGGTGCCCAAGCCA...CAGCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
3UTR-3UTR CAA 90 bp GCTAAGTCACGTGCCCAAGTTCCTGCAGGAAGTGGTGGAGCTAAGTTTAAGCCAATGCAGGCGGTTGGTTaGACCTTGCCAGAACTCCAT +
Preference number: 3 (lower is better)
Translates to: AKSRAQVPAGSGGAKFKPMQAVG*TLPELH
Trigger: ATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCAT...TGGCTTAAACTTAGCTCCACCACTTCCTGCAGGAACTTGGGCACGTGACTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR-3UTR CAA 90 bp CACGCAGGCTTAAGAGGGATAAACAAGGAGAGGGCTGCCCTTGGAGAAGGCCTGGGCAGGTGTGATTGTTaGAAATCTCTCCCAATATTG +
Preference number: 3 (lower is better)
Translates to: HAGLRGINKERAALGEGLGRCDC*KSLPIL
Trigger: CAATATTGGGAGAGATTTCAAACAATCACACCTGCC...CAGGCCTTCTCCAAGGGCAGCCCTCTCCTTGTTTATCCCTCTTAAGCCTGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR TCA 72 bp CTCAGTGCCAGCCAGTGCAAGCAACAGGCAGTTCTTTaGTCCTGGCTTAGTCACAGCAAACATTTACCCAGC +
Preference number: 3 (lower is better)
Translates to: LSASQCKQQAVL*SWLSHSKHLPS
Trigger: GCTGGGTAAATGTTTGCTGTGACTAAGCCAGGATCAAAGAACTGCCTGTTGCTTGCACTGGCTGGCACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR TCA 72 bp GCAGCAAACTGTTTCACTGGGTCAAGGGAGGTCAGATaGGTCTCCTCAAATGCCCATTACGAAAGGCTGCCT +
Preference number: 3 (lower is better)
Translates to: AANCFTGSREVR*VSSNAHYERLP
Trigger: AGGCAGCCTTTCGTAATGGGCATTTGAGGAGACTCATCTGACCTCCCTTGACCCAGTGAAACAGTTTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641323.1
3UTR-3UTR CAA 90 bp ACTGAGTACAGAGAACTTAGAGGATTAGCTCTGAAGAGTCCTGAAGATAAGGGGATCCCACACCCTCTCTaGACACCTAGCCCTAGCTCC +
Preference number: 3 (lower is better)
Translates to: TEYRELRGLALKSPEDKGIPHPL*TPSPSS
Trigger: GGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGAT...CCCCTTATCTTCAGGACTCTTCAGAGCTAATCCTCTAAGTTCTCTGTACTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR CAA 90 bp TCCAGCTCTTTTCCTTTTCGACTCTCGAAGTTAGTGAAGAAGCGGAAGCCATCTGCCAGACACATGGCATaGGCTTCCCCTATGTCAGGA +
Preference number: 3 (lower is better)
Translates to: SSSFPFRLSKLVKKRKPSARHMA*ASPMSG
Trigger: TCCTGACATAGGGGAAGCCAATGCCATGTGTCTGGC...AGATGGCTTCCGCTTCTTCACTAACTTCGAGAGTCGAAAAGGAAAAGAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
3UTR GCA 72 bp CATAAGAAGGTGACTGAGGAAGCAAGAGCCAAACCCTaGAGGCCCTGGGAAAGATTACTAGCTCTTTTCACC +
Preference number: 3 (lower is better)
Translates to: HKKVTEEARAKP*RPWERLLALFT
Trigger: GGTGAAAAGAGCTAGTAATCTTTCCCAGGGCCTGCAGGGTTTGGCTCTTGCTTCCTCAGTCACCTTCTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR-3UTR CAA 90 bp TATTGGTACCAGCACATGAAGCCCTTCTACAAAATTCCTGACGGACTGGGAATAAGCCACCCCAGGATTTaGGCTTGGGCACCTCTTGAT +
Preference number: 3 (lower is better)
Translates to: YWYQHMKPFYKIPDGLGISHPRI*AWAPLD
Trigger: ATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGCT...TATTCCCAGTCCGTCAGGAATTTTGTAGAAGGGCTTCATGTGCTGGTACCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
3UTR-3UTR CAA 90 bp ATTAGAGTCCAGCTCTTTTCCTTTTCGACTCTCGAAGTTAGTGAAGAAGCGGAACCTGGTGGGATGTCTTaGAAGCCCCCTTTTCCCACG +
Preference number: 3 (lower is better)
Translates to: IRVQLFSFSTLEVSEEAEPGGMS*KPPFPT
Trigger: CGTGGGAAAAGGGGGCTTCAAAGACATCCCACCAGG...TTCCGCTTCTTCACTAACTTCGAGAGTCGAAAAGGAAAAGAGCTGGACTCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000641323.1
3UTR TCA 72 bp AGTCTCCTCAAATGCCCATTACGAAAGGCTGCCTTTTaGACCCATCTTCATTTGCGTTTCCCCGGAACTCCT +
Preference number: 3 (lower is better)
Translates to: SLLKCPLRKAAF*THLHLRFPGTP
Trigger: AGGAGTTCCGGGGAAACGCAAATGAAGATGGGTTCAAAAGGCAGCCTTTCGTAATGGGCATTTGAGGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641323.1
3UTR GCA 72 bp CAGGGAGGTTTACTCATTTTGGATTCATTCATTGAATaGACGCGAAGTGCCCACTCTGGGTCTGACAACAGG +
Preference number: 3 (lower is better)
Translates to: QGGLLILDSFIE*TRSAHSGSDNR
Trigger: CCTGTTGTCAGACCCAGAGTGGGCACTTCGCGTGCATTCAATGAATGAATCCAAAATGAGTAAACCTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR-3UTR CAA 90 bp ATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTAGGGAGGGAAATGGGTaGAGTTTAGAAAGAAGGGCC +
Preference number: 3 (lower is better)
Translates to: ILGIAIAAGRGFWFLLFPREGNG*SLERRA
Trigger: GGCCCTTCTTTCTAAACTCAACCCATTTCCCTCCCT...AGGAAACAATAGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR CAA 90 bp TATTGGTACCAGCACATGAAGCCCTTCTACAAAATTCCTGACGGACTGGGAATAAGGGAGGGAAATGGGTaGAGTTTAGAAAGAAGGGCC +
Preference number: 3 (lower is better)
Translates to: YWYQHMKPFYKIPDGLGIREGNG*SLERRA
Trigger: GGCCCTTCTTTCTAAACTCAACCCATTTCCCTCCCT...TATTCCCAGTCCGTCAGGAATTTTGTAGAAGGGCTTCATGTGCTGGTACCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR-3UTR CAA 90 bp AAAATCTTCCTGTCCTATTGGTACCAGCACATGAAGCCCTTCTACAAAATTCCTAATCTTCCTGTCCTATaGGTACCAGCACATGAAGCC +
Preference number: 3 (lower is better)
Translates to: KIFLSYWYQHMKPFYKIPNLPVL*VPAHEA
Trigger: GGCTTCATGTGCTGGTACCAATAGGACAGGAAGATT...AGGAATTTTGTAGAAGGGCTTCATGTGCTGGTACCAATAGGACAGGAAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR TCA 72 bp ATTCCTAGTGACAGCCCACTCCTTCTCAGGCAGGTGTaGTTGTTTGAAATCTCTCCCAATATTGAGATGAAA +
Preference number: 3 (lower is better)
Translates to: IPSDSPLLLRQV*LFEISPNIEMK
Trigger: TTTCATCTCAATATTGGGAGAGATTTCAAACAATCACACCTGCCTGAGAAGGAGTGGGCTGTCACTAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR-3UTR CAA 90 bp ACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAACAAAGGGAGGGAAATGGGTaGAGTTTAGAAAGAAGGGCC +
Preference number: 3 (lower is better)
Translates to: TPKVLDLSSSNFKLLTKQREGNG*SLERRA
Trigger: GGCCCTTCTTTCTAAACTCAACCCATTTCCCTCCCT...TTGTTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR CAA 90 bp ACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAACAAGCTGCTATGAATGACTaGGCTTTAATGACTCCCAAG +
Preference number: 3 (lower is better)
Translates to: TPKVLDLSSSNFKLLTKQAAMND*ALMTPK
Trigger: CTTGGGAGTCATTAAAGCCAAGTCATTCATAGCAGC...TTGTTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR-3UTR CAA 90 bp ACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAACAATCAAAAGTAGGCCTATaGTCACAGACACAGAGACAG +
Preference number: 3 (lower is better)
Translates to: TPKVLDLSSSNFKLLTKQSKVGL*SQTQRQ
Trigger: CTGTCTCTGTGTCTGTGACAATAGGCCTACTTTTGA...TTGTTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR TCA 90 bp CACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGTCCCAGAGGCCCGAACGTCGCCGTaGCGCCCCGCAGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: HPLLTPSPSSTLGQQVPEARTSP*RPAAST
Trigger: CGTGCTGGCTGCGGGGCGTCACGGCGACGTTCGGGC...CTCTGGGACCTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp GGGAATCTCCTGTGGGTAGGCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTGCCCGAACGTCGCCGTaGCGCCCCGCAGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: GNLLWVGPAERLSGHAGGARTSP*RPAAST
Trigger: CGTGCTGGCTGCGGGGCGTCACGGCGACGTTCGGGC...ACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGCCTACCCACAGGAGATTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp TCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTGCCCGAACGTCGCCGTaGCGCCCCGCAGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: SGHAGGWFDLARTPSPEGARTSP*RPAAST
Trigger: CGTGCTGGCTGCGGGGCGTCACGGCGACGTTCGGGC...ACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp GCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAAGCAGCCAGCACGTCATaGGGGGCCGCCGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: APPKDYPVMQAVGLTLPEAASTS*GAAGHV
Trigger: CACGTGGCCGGCGGCCCCCCATGACGTGCTGGCTGC...TTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp TCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCGCCCGAACGTCGCCGTaGCGCCCCGCAGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: SPERESHRLLPLEGAILIARTSP*RPAAST
Trigger: CGTGCTGGCTGCGGGGCGTCACGGCGACGTTCGGGC...GATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp GGACATAGCCACCCCAGGATTTTGGCTTGGGCACCTCTTGATCCTGGTAGAGCTGCCCGAACGTCGCCGTaGCGCCCCGCAGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: GHSHPRILAWAPLDPGRAARTSP*RPAAST
Trigger: CGTGCTGGCTGCGGGGCGTCACGGCGACGTTCGGGC...AGCTCTACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGCTATGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR GCA 90 bp GGCCTCCGGCATGCAGGGAAAAGGCAGGAGAGCTGTAGTGCGCAGGCCCACAGCAGGAGGCCTCCGGCATaGAGGGAAAAGGCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: GLRHAGKRQESCSAQAHSRRPPA*REKAGE
Trigger: CTCTCCTGCCTTTTCCCTGCATGCCGGAGGCCTCCT...GCTGTGGGCCTGCGCACTACAGCTCTCCTGCCTTTTCCCTGCATGCCGGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR CCA 90 bp TCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTGCAGCCAGCACGTCATaGGGGGCCGCCGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: SVTRKGVTPAATPRGSYPAASTS*GAAGHV
Trigger: CACGTGGCCGGCGGCCCCCCATGACGTGCTGGCTGC...AGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGTCCCAGTGACTGAGGTAGCCTaGCCACTCGGCAGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: PHPLLTPSPSSTLGQQVPVTEVA*PLGRSP
Trigger: GGGCGACCTGCCGAGTGGCCAGGCTACCTCAGTCAC...TGGGACCTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGTCCCATCTTCCTCCCCGCGGTaGGTCATGGGCCCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: PHPLLTPSPSSTLGQQVPSSSPR*VMGPKG
Trigger: CCCTTTGGGGCCCATGACCCACCGCGGGGAGGAAGA...TGGGACCTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp CCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGTCCCAGACCACACAGGTGACTaGGGTAGCCTGGCCACTCGG +
Preference number: 4 (lower is better)
Translates to: PHPLLTPSPSSTLGQQVPDHTGD*GSLATR
Trigger: CCGAGTGGCCAGGCTACCTCAGTCACCTGTGTGGTC...TGGGACCTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR GCA 90 bp CACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGTCCCAGAGCAGCCCCAATCTGGCTaGTCTTGGGGCGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: HPLLTPSPSSTLGQQVPEQPQSG*SWGGSG
Trigger: TCCACTCCCGCCCCAAGAGCAGCCAGATTGGGGCTG...CTCTGGGACCTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR GCA 90 bp GCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACACCCAACACCCTCCTaGCTGCAGGGGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: APPKDYPVMQAVGLTLPEHPTPS*LQGATG
Trigger: CCCTGTGGCCCCCTGCAGGCAGGAGGGTGTTGGGTG...TTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CCA 90 bp GCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATGCAGCCAGCACGTCATaGGGGGCCGCCGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: AGGWFDLARTPSPEGTGHAASTS*GAAGHV
Trigger: CACGTGGCCGGCGGCCCCCCATGACGTGCTGGCTGC...ATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp TGGGTCCCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCGTGACTGAGGTAGCCTaGCCACTCGGCAGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: WVPIPHPLLTPSPSSTLGVTEVA*PLGRSP
Trigger: GGGCGACCTGCCGAGTGGCCAGGCTACCTCAGTCAC...GCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGGGACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp TTCCACACGCACCTGACGGTTAAGTGGCTCCCAGTAGAAGACAAGGGAAGCAAAGCCCGAACGTCGCCGTaGCGCCCCGCAGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: FHTHLTVKWLPVEDKGSKARTSP*RPAAST
Trigger: CGTGCTGGCTGCGGGGCGTCACGGCGACGTTCGGGC...TTTGCTTCCCTTGTCTTCTACTGGGAGCCACTTAACCGTCAGGTGCGTGTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp CCCTGTCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTGACCACACAGGTGACTaGGGTAGCCTGGCCACTCGG +
Preference number: 4 (lower is better)
Translates to: PCLSPERESHRLLPLEGADHTGD*GSLATR
Trigger: CCGAGTGGCCAGGCTACCTCAGTCACCTGTGTGGTC...AGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR GCA 90 bp CCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGCCCCGCGGTAACTCTTaGGCATGGGTCCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PIPHPLLTPSPSSTLGQQPRGNS*AWVPGP
Trigger: TGGACCTGGGACCCATGCGCAAGAGTTACCGCGGGG...CTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp TGGGTAGGCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTCACGTGACCCGGCTGTaGCCCGGCACTGGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: WVGPAERLSGHAGGWFDLHVTRL*PGTGFL
Trigger: AAGGAACCCAGTGCCGGGCCACAGCCGGGTCACGTG...AAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGCCTACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp ACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAAGCAGCCAGCACGTCATaGGGGGCCGCCGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: TRKGVTPAATPRGSYPNQAASTS*GAAGHV
Trigger: CACGTGGCCGGCGGCCCCCCATGACGTGCTGGCTGC...TTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCAGCCAGCACGTCATaGGGGGCCGCCGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: LARTPSPEGTGHSHPRILAASTS*GAAGHV
Trigger: CACGTGGCCGGCGGCCCCCCATGACGTGCTGGCTGC...CAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp TATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAAAGCAGCCAGCACGTCATaGGGGGCCGCCGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: YDSHGNRQGCWGPVCHQKAASTS*GAAGHV
Trigger: CACGTGGCCGGCGGCCCCCCATGACGTGCTGGCTGC...TTTCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR GCA 90 bp TGGGTAGGCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTCCCCGCGGTAACTCTTaGGCATGGGTCCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: WVGPAERLSGHAGGWFDLPRGNS*AWVPGP
Trigger: TGGACCTGGGACCCATGCGCAAGAGTTACCGCGGGG...AAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGCCTACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR GCA 90 bp AGCTTTGGCCAGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCGGCAGGGGGAGGAACTaGACAGCCCAGACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SFGQYDSHGNRQGCWGPVGRGRN*TAQTWE
Trigger: CTCCCAGGTCTGGGCTGTGCAGTTCCTCCCCCTGCC...GACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACTGGCCAAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR GCA 90 bp TCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTGGCAGGGGGAGGAACTaGACAGCCCAGACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SVTRKGVTPAATPRGSYPGRGRN*TAQTWE
Trigger: CTCCCAGGTCTGGGCTGTGCAGTTCCTCCCCCTGCC...AGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp AGCTTTGGCCAGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCCACGTGACCCGGCTGTaGCCCGGCACTGGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: SFGQYDSHGNRQGCWGPVHVTRL*PGTGFL
Trigger: AAGGAACCCAGTGCCGGGCCACAGCCGGGTCACGTG...GACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACTGGCCAAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CACGCAGGCTTAAGAGGGATAAACAAGGAGAGGGCTGCCCTTGGAGAAGGCCTGCACGTGACCCGGCTGTaGCCCGGCACTGGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: HAGLRGINKERAALGEGLHVTRL*PGTGFL
Trigger: AAGGAACCCAGTGCCGGGCCACAGCCGGGTCACGTG...CAGGCCTTCTCCAAGGGCAGCCCTCTCCTTGTTTATCCCTCTTAAGCCTGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CCCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCACGTGACCCGGCTGTaGCCCGGCACTGGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: PAERLSGHAGGWFDLARTHVTRL*PGTGFL
Trigger: AAGGAACCCAGTGCCGGGCCACAGCCGGGTCACGTG...AGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp CCCTGTCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTAACAGACAGGGCTGCTaGGGCCCTGTCTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: PCLSPERESHRLLPLEGANRQGC*GPVCHQ
Trigger: CTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTT...AGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGTCCCAGAGCAATCTGGCTGCTCTTaGGGCGGGAGTGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: HPLLTPSPSSTLGQQVPEQSGCS*GGSGSS
Trigger: GCTACTTCCACTCCCGCCCCAAGAGCAGCCAGATTG...CTCTGGGACCTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp GCGGGAGTGGAAGTAGCACTCAGCCTCCTCCTCAGGCAGTTTCTTCACAGGGCCTCCCACACCCTCTCTTaGCACCTAGCCCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: AGVEVALSLLLRQFLHRASHTLS*HLALAP
Trigger: TGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGA...GGCCCTGTGAAGAAACTGCCTGAGGAGGAGGCTGAGTGCTACTTCCACTCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp CCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGTCCCATGGTTCAATCATCTCTaGGGGTGGGACCCAGGCATC +
Preference number: 4 (lower is better)
Translates to: PHPLLTPSPSSTLGQQVPWFNHL*GWDPGI
Trigger: GATGCCTGGGTCCCACCCTCAGAGATGATTGAACCA...TGGGACCTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp CCCTGTCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTAGTGGGTCTGGGGTCTaGATCTCTAAGGCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PCLSPERESHRLLPLEGASGSGV*ISKALP
Trigger: TGGCAGCGCCTTAGAGATTCAGACCCCAGACCCACT...AGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp CACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGTCCCAGAGGCGGATAATAGTGACTaGGGCACAGGTCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: HPLLTPSPSSTLGQQVPEADNSD*GTGPCR
Trigger: CCTGCATGGACCTGTGCCTCAGTCACTATTATCCGC...CTCTGGGACCTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR GCA 90 bp CCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACCCCGCGGTAACTCTTaGGCATGGGTCCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PVMQAVGLTLPELHHLRVPRGNS*AWVPGP
Trigger: TGGACCTGGGACCCATGCGCAAGAGTTACCGCGGGG...TACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR GCA 90 bp GGAGTGGAAGTAGCACTCAGCCTCCTCCTCAGGCAGTTTCTTCACAGGGCCTTCCCCCGCGGTAACTCTTaGGCATGGGTCCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GVEVALSLLLRQFLHRAFPRGNS*AWVPGP
Trigger: TGGACCTGGGACCCATGCGCAAGAGTTACCGCGGGG...GAAGGCCCTGTGAAGAAACTGCCTGAGGAGGAGGCTGAGTGCTACTTCCACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR GCA 90 bp GACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGGGCAGGGGGAGGAACTaGACAGCCCAGACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: DYPVMQAVGLTLPELHHLGRGRN*TAQTWE
Trigger: CTCCCAGGTCTGGGCTGTGCAGTTCCTCCCCCTGCC...CAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR GCA 90 bp TCTCAGATACTCCCGATCAGGGATCACAGAACTCTGGTGGCTGACCACAGCCCCCAGCCCCAATCTGGCTaGTCTTGGGGCGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: SQILPIRDHRTLVADHSPQPQSG*SWGGSG
Trigger: TCCACTCCCGCCCCAAGAGCAGCCAGATTGGGGCTG...GGGGCTGTGGTCAGCCACCAGAGTTCTGTGATCCCTGATCGGGAGTATCTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR GCA 90 bp GGGAATCTCCTGTGGGTAGGCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTGAGTGGCAAGCTCAGTaGCAGCCAGTGCAAGCAACA +
Preference number: 4 (lower is better)
Translates to: GNLLWVGPAERLSGHAGGEWQAQ*QPVQAT
Trigger: TGTTGCTTGCACTGGCTGGCACTGAGCTTGCCACTC...ACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGCCTACCCACAGGAGATTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CCA 90 bp TTTGGCCAGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACGTGACCCGGCTGTaGCCCGGCACTGGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: FGQYDSHGNRQGCWGPVCHVTRL*PGTGFL
Trigger: AAGGAACCCAGTGCCGGGCCACAGCCGGGTCACGTG...ACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACTGGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp TTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGAGTGACTGAGGTAGCCTaGCCACTCGGCAGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: LTLPELHHLRVQDIATPGVTEVA*PLGRSP
Trigger: GGGCGACCTGCCGAGTGGCCAGGCTACCTCAGTCAC...TCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp GGACATAGCCACCCCAGGATTTTGGCTTGGGCACCTCTTGATCCTGGTAGAGCTGTGACTGAGGTAGCCTaGCCACTCGGCAGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: GHSHPRILAWAPLDPGRAVTEVA*PLGRSP
Trigger: GGGCGACCTGCCGAGTGGCCAGGCTACCTCAGTCAC...AGCTCTACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGCTATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp GGCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAGGTAACTCTTGCGCATaGGTCCCAGGTCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: GPAERLSGHAGGWFDLARGNSCA*VPGPWQ
Trigger: CTGCCATGGACCTGGGACCCATGCGCAAGAGTTACC...TCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp CCCAAAGGGGAATCTCCTGTGGGTAGGCCCCGCCGAAAGACTATCCGGTCATGCAAGGGGAATCTCCTGTaGGTAGGCCCCGCCGAAAGA +
Preference number: 4 (lower is better)
Translates to: PKGESPVGRPRRKTIRSCKGNLL*VGPAER
Trigger: TCTTTCGGCGGGGCCTACCCACAGGAGATTCCCCTT...GCATGACCGGATAGTCTTTCGGCGGGGCCTACCCACAGGAGATTCCCCTTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp AGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGATCTTCCTCCCCGCGGTaGGTCATGGGCCCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: SMTHMVTDRAAGALSVTRSSSPR*VMGPKG
Trigger: CCCTTTGGGGCCCATGACCCACCGCGGGGAGGAAGA...TCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GGACATAGCCACCCCAGGATTTTGGCTTGGGCACCTCTTGATCCTGGTAGAGCTTCTTCCTCCCCGCGGTaGGTCATGGGCCCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: GHSHPRILAWAPLDPGRASSSPR*VMGPKG
Trigger: CCCTTTGGGGCCCATGACCCACCGCGGGGAGGAAGA...AGCTCTACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGCTATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp GACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGTCTTCCTCCCCGCGGTaGGTCATGGGCCCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: DYPVMQAVGLTLPELHHLSSSPR*VMGPKG
Trigger: CCCTTTGGGGCCCATGACCCACCGCGGGGAGGAAGA...CAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp CCAAAGGGGAATCTCCTGTGGGTAGGCCCCGCCGAAAGACTATCCGGTCATGCAAACAGACAGGGCTGCTaGGGCCCTGTCTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: PKGNLLWVGPAERLSGHANRQGC*GPVCHQ
Trigger: CTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTT...TGCATGACCGGATAGTCTTTCGGCGGGGCCTACCCACAGGAGATTCCCCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp AAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGTGGGTCATGGGCCCAATCTGGCTGCTCTTaGGGCGGGAGTGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: KVQVSHRASLPPRGGSWAQSGCS*GGSGSS
Trigger: GCTACTTCCACTCCCGCCCCAAGAGCAGCCAGATTG...GGCCCATGACCCACCGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp CCCTGTCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTCCGGAACTCCTCCCCTaGTGGGATGTCTTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: PCLSPERESHRLLPLEGAPELLP*WDVFEA
Trigger: GGCTTCAAAGACATCCCACCAGGGGAGGAGTTCCGG...AGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641323.1
CDS-3UTR TCA 90 bp AAGGCAGCAATCAGTAGGGGAAGTGCTATAAAAATATACTATCCCGGCCAAGCGGCCCGAACGTCGCCGTaGCGCCCCGCAGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: KAAISRGSAIKIYYPGQAARTSP*RPAAST
Trigger: CGTGCTGGCTGCGGGGCGTCACGGCGACGTTCGGGC...CGCTTGGCCGGGATAGTATATTTTTATAGCACTTCCCCTACTGATTGCTGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp TTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGAGACCACACAGGTGACTaGGGTAGCCTGGCCACTCGG +
Preference number: 4 (lower is better)
Translates to: LTLPELHHLRVQDIATPGDHTGD*GSLATR
Trigger: CCGAGTGGCCAGGCTACCTCAGTCACCTGTGTGGTC...TCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp GACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGGACCACACAGGTGACTaGGGTAGCCTGGCCACTCGG +
Preference number: 4 (lower is better)
Translates to: DYPVMQAVGLTLPELHHLDHTGD*GSLATR
Trigger: CCGAGTGGCCAGGCTACCTCAGTCACCTGTGTGGTC...CAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp TGGGTCCCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCTGCAGGCGGTTGGTTTaGCCTTGCCAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: WVPIPHPLLTPSPSSTLGCRRLV*PCQNSI
Trigger: GATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCA...GCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGGGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp TGGGTCCCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCGGCAGGAGAATTGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: WVPIPHPLLTPSPSSTLGGRRIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCAATTCTCCTGCC...GCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGGGACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp TCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTCAGAACTCTGGTGGCTaGCCACAGCCCCAATCTGGC +
Preference number: 4 (lower is better)
Translates to: SVTRKGVTPAATPRGSYPQNSGG*PQPQSG
Trigger: GCCAGATTGGGGCTGTGGTCAGCCACCAGAGTTCTG...AGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp TCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTCCTTCCACACGCACCTaGCGGTTAAGTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SGHAGGWFDLARTPSPEGPSTRT*RLSGSQ
Trigger: CTGGGAGCCACTTAACCGTCAGGTGCGTGTGGAAGG...ACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp GGCCTCCGGCATGCAGGGAAAAGGCAGGAGAGCTGTAGTGCGCAGGCCCACAGCCAAAGTGAGACTGGGTaGTTTCTCTCACCCACAGAT +
Preference number: 4 (lower is better)
Translates to: GLRHAGKRQESCSAQAHSQSETG*FLSPTD
Trigger: ATCTGTGGGTGAGAGAAATCACCCAGTCTCACTTTG...GCTGTGGGCCTGCGCACTACAGCTCTCCTGCCTTTTCCCTGCATGCCGGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR GCA 90 bp TCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTGGTAACAGACAGGGCTaGTGGGGCCCTGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: SVTRKGVTPAATPRGSYPGNRQG*WGPVCH
Trigger: GTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACC...AGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR GCA 90 bp TTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGGGCAGGGGGAGGAACTaGACAGCCCAGACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LPELHHLRVQDIATPGFWGRGRN*TAQTWE
Trigger: CTCCCAGGTCTGGGCTGTGCAGTTCCTCCCCCTGCC...CCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR GCA 90 bp GACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTCAGCCCCAATCTGGCTaGTCTTGGGGCGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: DLARTPSPEGTGHSHPRIQPQSG*SWGGSG
Trigger: TCCACTCCCGCCCCAAGAGCAGCCAGATTGGGGCTG...AATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR GCA 90 bp GCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTCAGCCCCAATCTGGCTaGTCTTGGGGCGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: ARTPSPEGTGHSHPRILAQPQSG*SWGGSG
Trigger: TCCACTCCCGCCCCAAGAGCAGCCAGATTGGGGCTG...AGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp CCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGTCCCACCAGACACATGGCATTaGCTTCCCCTATGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: PHPLLTPSPSSTLGQQVPPDTWH*LPLCQD
Trigger: GTCCTGACATAGGGGAAGCCAATGCCATGTGTCTGG...TGGGACCTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGTCCCAGAGCCAGACACATGGCATTaGCTTCCCCTATGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: HPLLTPSPSSTLGQQVPEPDTWH*LPLCQD
Trigger: GTCCTGACATAGGGGAAGCCAATGCCATGTGTCTGG...CTCTGGGACCTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GCGGGAGTGGAAGTAGCACTCAGCCTCCTCCTCAGGCAGTTTCTTCACAGGGCCGCCACCCCAGGATTTTaGCTTGGGCACCTCTTGATC +
Preference number: 4 (lower is better)
Translates to: AGVEVALSLLLRQFLHRAATPGF*LGHLLI
Trigger: GATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGC...GGCCCTGTGAAGAAACTGCCTGAGGAGGAGGCTGAGTGCTACTTCCACTCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp TGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGTGGGTCATGGGCCCCAAGCCACCCCAGGATTTTaGCTTGGGCACCTCTTGATC +
Preference number: 4 (lower is better)
Translates to: CKSLIEPVFLPAVGHGPQATPGF*LGHLLI
Trigger: GATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGC...TTGGGGCCCATGACCCACCGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp GCAGGGTCAGATTCAGTGGGTCTGGGGTCTGAATCTCTAAGGCGCTGCCAAGTGGAAACCCCGTCTCGCTaGGTGTGGTGGCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: AGSDSVGLGSESLRRCQVETPSR*VWWLMP
Trigger: AGGCATGAGCCACCACACCCAGCGAGACGGGGTTTC...CACTTGGCAGCGCCTTAGAGATTCAGACCCCAGACCCACTGAATCTGACCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp CCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGTCCCAGGCACTGGGTTCCTTTaGGTTCGGAACCAATTTCTC +
Preference number: 4 (lower is better)
Translates to: PHPLLTPSPSSTLGQQVPGTGFL*VRNQFL
Trigger: GAGAAATTGGTTCCGAACTCAAAGGAACCCAGTGCC...TGGGACCTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp ACTGAGTACAGAGAACTTAGAGGATTAGCTCTGAAGAGTCCTGAAGATAAGGGGGCCCGAACGTCGCCGTaGCGCCCCGCAGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: TEYRELRGLALKSPEDKGARTSP*RPAAST
Trigger: CGTGCTGGCTGCGGGGCGTCACGGCGACGTTCGGGC...CCCCTTATCTTCAGGACTCTTCAGAGCTAATCCTCTAAGTTCTCTGTACTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp GCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTCAGAACTCTGGTGGCTaGCCACAGCCCCAATCTGGC +
Preference number: 4 (lower is better)
Translates to: ARTPSPEGTGHSHPRILAQNSGG*PQPQSG
Trigger: GCCAGATTGGGGCTGTGGTCAGCCACCAGAGTTCTG...AGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp GACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGCAGAACTCTGGTGGCTaGCCACAGCCCCAATCTGGC +
Preference number: 4 (lower is better)
Translates to: DYPVMQAVGLTLPELHHLQNSGG*PQPQSG
Trigger: GCCAGATTGGGGCTGTGGTCAGCCACCAGAGTTCTG...CAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp AGCTTTGGCCAGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCCTGGTGGGATGTCTTTaGAGCCCCCTTTTCCCACGG +
Preference number: 4 (lower is better)
Translates to: SFGQYDSHGNRQGCWGPVLVGCL*SPLFPR
Trigger: CCGTGGGAAAAGGGGGCTTCAAAGACATCCCACCAG...GACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACTGGCCAAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641323.1
CDS-3UTR GCA 90 bp AGAGTTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGTGGGTCAGGTAACAGACAGGGCTaGTGGGGCCCTGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: RVKVQVSHRASLPPRGGSGNRQG*WGPVCH
Trigger: GTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACC...TGACCCACCGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR GCA 90 bp GCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCGGTAACAGACAGGGCTaGTGGGGCCCTGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: AVGLTLPELHHLRVQDIAGNRQG*WGPVCH
Trigger: GTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACC...GGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR GCA 90 bp ATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAAAGGGTAACAGACAGGGCTaGTGGGGCCCTGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: MTHMVTDRAAGALSVTRKGNRQG*WGPVCH
Trigger: GTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACC...CTTTCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR GCA 90 bp CCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGTCCCAAGAGATCCTGGGAATTaGAATAGCAGCAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PHPLLTPSPSSTLGQQVPRDPGN*NSSRQR
Trigger: CCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCT...TGGGACCTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR GCA 90 bp ACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAACAGCCCCAATCTGGCTaGTCTTGGGGCGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: TRKGVTPAATPRGSYPNQQPQSG*SWGGSG
Trigger: TCCACTCCCGCCCCAAGAGCAGCCAGATTGGGGCTG...TTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR GCA 90 bp TGGGTCCCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCGACAGGGTTTTGCCATaGTGGCCAGGCTGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: WVPIPHPLLTPSPSSTLGDRVLP*WPGWFN
Trigger: ATTGAACCAGCCTGGCCAGCATGGCAAAACCCTGTC...GCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGGGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR GCA 90 bp GCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAATGGCAGGAGGGCACCTaGACACAGAGAGCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: APPKDYPVMQAVGLTLPEWQEGT*TQRASR
Trigger: TCTACTTGCTCTCTGTGTGCAGGTGCCCTCCTGCCA...TTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR GCA 90 bp GGCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAAAAGAGCACAGCAAGTaGCAAGGCCTCATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GPAERLSGHAGGWFDLARKEHSK*QGLMAG
Trigger: TCCTGCCATGAGGCCTTGGCACTTGCTGTGCTCTTT...TCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR CCA 90 bp CACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGCAAGGTCAACACGTGACCCGGCTGTaGCCCGGCACTGGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: HRLLPLEGAILINHRQGQHVTRL*PGTGFL
Trigger: AAGGAACCCAGTGCCGGGCCACAGCCGGGTCACGTG...TTGACCTTGCCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTGTGACTGAGGTAGCCTaGCCACTCGGCAGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: GRRDPGNCNSSRQRLLVPVTEVA*PLGRSP
Trigger: GGGCGACCTGCCGAGTGGCCAGGCTACCTCAGTCAC...AGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTGACTGAGGTAGCCTaGCCACTCGGCAGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: IQGRRDPGNCNSSRQRLLVTEVA*PLGRSP
Trigger: GGGCGACCTGCCGAGTGGCCAGGCTACCTCAGTCAC...CAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTTGGGCATGGGTCCCAGGTCCATaGCAGCACTGCGACCACACA +
Preference number: 4 (lower is better)
Translates to: TPSPEGTGHSHPRILAWAWVPGP*QHCDHT
Trigger: TGTGTGGTCGCAGTGCTGCCATGGACCTGGGACCCA...TGCCCAAGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp GACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTGGGTCCCAGGTCCATaGCAGCACTGCGACCACACA +
Preference number: 4 (lower is better)
Translates to: DLARTPSPEGTGHSHPRIWVPGP*QHCDHT
Trigger: TGTGTGGTCGCAGTGCTGCCATGGACCTGGGACCCA...AATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp GCTCTTCTCCATAGCCAGCAGGTTGCTTGCTCATCCAGTCTGTCCCTGGTTAGCTGGGTCCCAGGTCCATaGCAGCACTGCGACCACACA +
Preference number: 4 (lower is better)
Translates to: ALLHSQQVACSSSLSLVSWVPGP*QHCDHT
Trigger: TGTGTGGTCGCAGTGCTGCCATGGACCTGGGACCCA...GCTAACCAGGGACAGACTGGATGAGCAAGCAACCTGCTGGCTATGGAGAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CAGGTCCCAGAGTTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGGTAACTCTTGCGCATaGGTCCCAGGTCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: QVPELRCKSLIEPVFLPAGNSCA*VPGPWQ
Trigger: CTGCCATGGACCTGGGACCCATGCGCAAGAGTTACC...CGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAACTCTGGGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp TGGGTCCCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCGGTCATGCAGGCGGTTaGTTTGACCTTGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: WVPIPHPLLTPSPSSTLGGHAGG*FDLART
Trigger: AGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACC...GCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGGGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GGCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAGGTCATGCAGGCGGTTaGTTTGACCTTGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: GPAERLSGHAGGWFDLARGHAGG*FDLART
Trigger: AGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACC...TCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp TCTCAGATACTCCCGATCAGGGATCACAGAACTCTGGTGGCTGACCACAGCCCCAAGGGGAATCTCCTGTaGGTAGGCCCCGCCGAAAGA +
Preference number: 4 (lower is better)
Translates to: SQILPIRDHRTLVADHSPKGNLL*VGPAER
Trigger: TCTTTCGGCGGGGCCTACCCACAGGAGATTCCCCTT...GGGGCTGTGGTCAGCCACCAGAGTTCTGTGATCCCTGATCGGGAGTATCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp CACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGCAAGGTCAATCTTCCTCCCCGCGGTaGGTCATGGGCCCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: HRLLPLEGAILINHRQGQSSSPR*VMGPKG
Trigger: CCCTTTGGGGCCCATGACCCACCGCGGGGAGGAAGA...TTGACCTTGCCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGTCTTCCTCCCCGCGGTaGGTCATGGGCCCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: IQGRRDPGNCNSSRQRLLSSSPR*VMGPKG
Trigger: CCCTTTGGGGCCCATGACCCACCGCGGGGAGGAAGA...CAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp TGCCCAGGCTGCATTCATATCATAGTAGAGACAGGGTTTTGCCATGCTGGCCAGTCTTCCTCCCCGCGGTaGGTCATGGGCCCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: CPGCIHIIVETGFCHAGQSSSPR*VMGPKG
Trigger: CCCTTTGGGGCCCATGACCCACCGCGGGGAGGAAGA...CTGGCCAGCATGGCAAAACCCTGTCTCTACTATGATATGAATGCAGCCTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GCAGGGTCAGATTCAGTGGGTCTGGGGTCTGAATCTCTAAGGCGCTGCCAAGTGCAATCTGGCTGCTCTTaGGGCGGGAGTGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: AGSDSVGLGSESLRRCQVQSGCS*GGSGSS
Trigger: GCTACTTCCACTCCCGCCCCAAGAGCAGCCAGATTG...CACTTGGCAGCGCCTTAGAGATTCAGACCCCAGACCCACTGAATCTGACCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp AATCTCCTGTGGGTAGGCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGGATGCTCCTGGCTTGTaGACCACCCTGTGTATAGCA +
Preference number: 4 (lower is better)
Translates to: NLLWVGPAERLSGHAGGWDAPGL*TTLCIA
Trigger: TGCTATACACAGGGTGGTCCACAAGCCAGGAGCATC...CCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGCCTACCCACAGGAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CCA 90 bp GGGAATCTCCTGTGGGTAGGCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTCACCTGACGGTTAAGTaGCTCCCAGTAGAAGACAAG +
Preference number: 4 (lower is better)
Translates to: GNLLWVGPAERLSGHAGGHLTVK*LPVEDK
Trigger: CTTGTCTTCTACTGGGAGCCACTTAACCGTCAGGTG...ACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGCCTACCCACAGGAGATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp CACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGTCCCAGAGAAATGCATGCTTGGCTaGCATGGACTCAGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: HPLLTPSPSSTLGQQVPEKCMLG*HGLREV
Trigger: AACCTCCCTGAGTCCATGCCAGCCAAGCATGCATTT...CTCTGGGACCTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR TCA 90 bp CACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGCAAGGTCAAGACCACACAGGTGACTaGGGTAGCCTGGCCACTCGG +
Preference number: 4 (lower is better)
Translates to: HRLLPLEGAILINHRQGQDHTGD*GSLATR
Trigger: CCGAGTGGCCAGGCTACCTCAGTCACCTGTGTGGTC...TTGACCTTGCCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp AGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGATCCCACACCCTCTCTTaGCACCTAGCCCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SMTHMVTDRAAGALSVTRSHTLS*HLALAP
Trigger: TGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGA...TCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp GTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGTCCCACACCCTCTCTTaGCACCTAGCCCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VMQAVGLTLPELHHLRVQSHTLS*HLALAP
Trigger: TGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGA...CTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp TTTGGCCAGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTTCCCACACCCTCTCTTaGCACCTAGCCCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: FGQYDSHGNRQGCWGPVCSHTLS*HLALAP
Trigger: TGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGA...ACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACTGGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp AGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGCAGAACTCTGGTGGCTaGCCACAGCCCCAATCTGGC +
Preference number: 4 (lower is better)
Translates to: RESHRLLPLEGAILINHRQNSGG*PQPQSG
Trigger: GCCAGATTGGGGCTGTGGTCAGCCACCAGAGTTCTG...CCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp AGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTTGGCAGAACTCTGGTGGCTaGCCACAGCCCCAATCTGGC +
Preference number: 4 (lower is better)
Translates to: RTPSPEGTGHSHPRILAWQNSGG*PQPQSG
Trigger: GCCAGATTGGGGCTGTGGTCAGCCACCAGAGTTCTG...CCAAGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp TCTCCTGTGGGTAGGCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGTTAAGGATCATAGACTGTaGGGGTGGGAGGTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SPVGRPRRKTIRSCRRLVKDHRL*GWEVLV
Trigger: AACCAAGACCTCCCACCCTCACAGTCTATGATCCTT...AACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGCCTACCCACAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR TCA 90 bp CCCAAAGGGGAATCTCCTGTGGGTAGGCCCCGCCGAAAGACTATCCGGTCATGCCAACAGGCAGTTCTTTaGTCCTGGCTTAGTCACAGC +
Preference number: 4 (lower is better)
Translates to: PKGESPVGRPRRKTIRSCQQAVL*SWLSHS
Trigger: GCTGTGACTAAGCCAGGATCAAAGAACTGCCTGTTG...GCATGACCGGATAGTCTTTCGGCGGGGCCTACCCACAGGAGATTCCCCTTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR TCA 90 bp ACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAACCTTCCACACGCACCTaGCGGTTAAGTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TRKGVTPAATPRGSYPNQPSTRT*RLSGSQ
Trigger: CTGGGAGCCACTTAACCGTCAGGTGCGTGTGGAAGG...TTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp GGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTTGCCCACTCTGGGTCTaGCAACAGGAGACGTGCGGG +
Preference number: 4 (lower is better)
Translates to: GRRDPGNCNSSRQRLLVPCPLWV*QQETCG
Trigger: CCCGCACGTCTCCTGTTGTCAGACCCAGAGTGGGCA...AGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR TCA 90 bp GGCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGATCAAGGGAGGTCAGATaGGTCTCCTCAAATGCCCAT +
Preference number: 4 (lower is better)
Translates to: GPAERLSGHAGGWFDLARSREVR*VSSNAH
Trigger: ATGGGCATTTGAGGAGACTCATCTGACCTCCCTTGA...TCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641323.1
CDS-3UTR GCA 90 bp TCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTGAGTGGCAAGCTCAGTaGCAGCCAGTGCAAGCAACA +
Preference number: 4 (lower is better)
Translates to: SGHAGGWFDLARTPSPEGEWQAQ*QPVQAT
Trigger: TGTTGCTTGCACTGGCTGGCACTGAGCTTGCCACTC...ACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR GCA 90 bp GTCCCAGAGTTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGTGGGGGAAGGAAGGATTTaGCAGTCGCCCAACCAAGCT +
Preference number: 4 (lower is better)
Translates to: VPELRCKSLIEPVFLPAVGEGRI*QSPNQA
Trigger: AGCTTGGTTGGGCGACTGGCAAATCCTTCCTTCCCC...CACCGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAACTCTGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CCA 90 bp ACTGAGTACAGAGAACTTAGAGGATTAGCTCTGAAGAGTCCTGAAGATAAGGGGGCAGCCAGCACGTCATaGGGGGCCGCCGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: TEYRELRGLALKSPEDKGAASTS*GAAGHV
Trigger: CACGTGGCCGGCGGCCCCCCATGACGTGCTGGCTGC...CCCCTTATCTTCAGGACTCTTCAGAGCTAATCCTCTAAGTTCTCTGTACTCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ACACACAGACACACATCACTTACTCATAAACGGCACAGCCTACGGTACAAGAAAGCAGCCAGCACGTCATaGGGGGCCGCCGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: THRHTSLTHKRHSLRYKKAASTS*GAAGHV
Trigger: CACGTGGCCGGCGGCCCCCCATGACGTGCTGGCTGC...TTTCTTGTACCGTAGGCTGTGCCGTTTATGAGTAAGTGATGTGTGTCTGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATATGGGTCCCAGGTCCATaGCAGCACTGCGACCACACA +
Preference number: 4 (lower is better)
Translates to: QAVGLTLPELHHLRVQDIWVPGP*QHCDHT
Trigger: TGTGTGGTCGCAGTGCTGCCATGGACCTGGGACCCA...TATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp TATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAAATGGGTCCCAGGTCCATaGCAGCACTGCGACCACACA +
Preference number: 4 (lower is better)
Translates to: YDSHGNRQGCWGPVCHQKWVPGP*QHCDHT
Trigger: TGTGTGGTCGCAGTGCTGCCATGGACCTGGGACCCA...TTTCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAAAGGGTAACTCTTGCGCATaGGTCCCAGGTCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: MTHMVTDRAAGALSVTRKGNSCA*VPGPWQ
Trigger: CTGCCATGGACCTGGGACCCATGCGCAAGAGTTACC...CTTTCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GGACATAGCCACCCCAGGATTTTGGCTTGGGCACCTCTTGATCCTGGTAGAGCTGGTAACTCTTGCGCATaGGTCCCAGGTCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: GHSHPRILAWAPLDPGRAGNSCA*VPGPWQ
Trigger: CTGCCATGGACCTGGGACCCATGCGCAAGAGTTACC...AGCTCTACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGCTATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp GCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACCAGACACATGGCATTaGCTTCCCCTATGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: APPKDYPVMQAVGLTLPEPDTWH*LPLCQD
Trigger: GTCCTGACATAGGGGAAGCCAATGCCATGTGTCTGG...TTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CCA 90 bp GTCCCAGAGTTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGTGGCCACCCCAGGATTTTaGCTTGGGCACCTCTTGATC +
Preference number: 4 (lower is better)
Translates to: VPELRCKSLIEPVFLPAVATPGF*LGHLLI
Trigger: GATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGC...CACCGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAACTCTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp AGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAAAGGGGAATCTCCTGTaGGTAGGCCCCGCCGAAAGA +
Preference number: 4 (lower is better)
Translates to: SMTHMVTDRAAGALSVTRKGNLL*VGPAER
Trigger: TCTTTCGGCGGGGCCTACCCACAGGAGATTCCCCTT...TCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTAAGGGGAATCTCCTGTaGGTAGGCCCCGCCGAAAGA +
Preference number: 4 (lower is better)
Translates to: ARTPSPEGTGHSHPRILAKGNLL*VGPAER
Trigger: TCTTTCGGCGGGGCCTACCCACAGGAGATTCCCCTT...AGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp ATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAAAGAAGGGGAATCTCCTGTaGGTAGGCCCCGCCGAAAGA +
Preference number: 4 (lower is better)
Translates to: MTHMVTDRAAGALSVTRKKGNLL*VGPAER
Trigger: TCTTTCGGCGGGGCCTACCCACAGGAGATTCCCCTT...CTTTCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTGGCTCTTCCTCCCCGCGGTaGGTCATGGGCCCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LGIAIAAGRGFWFLLFPGSSSPR*VMGPKG
Trigger: CCCTTTGGGGCCCATGACCCACCGCGGGGAGGAAGA...GCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACAACAGACAGGGCTGCTaGGGCCCTGTCTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: GWFDLARTPSPEGTGHSHNRQGC*GPVCHQ
Trigger: CTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTT...GTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp GCGGGAGTGGAAGTAGCACTCAGCCTCCTCCTCAGGCAGTTTCTTCACAGGGCCGCAGGCAGAGGCTTTTaGTTCCTATTGTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: AGVEVALSLLLRQFLHRAAGRGF*FLLFPG
Trigger: GCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGC...GGCCCTGTGAAGAAACTGCCTGAGGAGGAGGCTGAGTGCTACTTCCACTCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp GGATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTGAAACCCCGTCTCGCTaGGTGTGGTGGCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: GSREGEILGIAIAAGRGFETPSR*VWWLMP
Trigger: AGGCATGAGCCACCACACCCAGCGAGACGGGGTTTC...AAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTCAATCTGGCTGCTCTTaGGGCGGGAGTGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: ARTPSPEGTGHSHPRILAQSGCS*GGSGSS
Trigger: GCTACTTCCACTCCCGCCCCAAGAGCAGCCAGATTG...AGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp GGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCAATCTGGCTGCTCTTaGGGCGGGAGTGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: GGWFDLARTPSPEGTGHSQSGCS*GGSGSS
Trigger: GCTACTTCCACTCCCGCCCCAAGAGCAGCCAGATTG...GCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp TCTTGGGGCGGGAGTGGAAGTAGCACTCAGCCTCCTCCTCAGGCAGTTTCTTCAGCACAGTTCACAGAGTaGCAAGCTCAGTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SWGGSGSSTQPPPQAVSSAQFTE*QAQCQP
Trigger: TGGCTGGCACTGAGCTTGCCACTCTGTGAACTGTGC...TGAAGAAACTGCCTGAGGAGGAGGCTGAGTGCTACTTCCACTCCCGCCCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CCA 90 bp TCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTGCACAGTTCACAGAGTaGCAAGCTCAGTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SVTRKGVTPAATPRGSYPAQFTE*QAQCQP
Trigger: TGGCTGGCACTGAGCTTGCCACTCTGTGAACTGTGC...AGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CTTGGAGAAGGCCTGCGGATAATAGTGACTGAGGCACAGGTCCATGCAGGGGAAGGAGAGGGCTGCCCTTaGAGAAGGCCTGCGGATAAT +
Preference number: 4 (lower is better)
Translates to: LGEGLRIIVTEAQVHAGEGEGCP*RRPADN
Trigger: ATTATCCGCAGGCCTTCTCCAAGGGCAGCCCTCTCC...TTCCCCTGCATGGACCTGTGCCTCAGTCACTATTATCCGCAGGCCTTCTCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp TTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGAGTGCCAAGGCCTCATaGCAGGAGGGCACCTGCACA +
Preference number: 4 (lower is better)
Translates to: LPELHHLRVQDIATPGFWSAKAS*QEGTCT
Trigger: TGTGCAGGTGCCCTCCTGCCATGAGGCCTTGGCACT...CCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641856.1
3UTR CAA 72 bp CCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGTTaGACCTTGCCAGAACTCCATCACCTGAGGGTACAG +
Preference number: 4 (lower is better)
Translates to: PPKDYPVMQAVG*TLPELHHLRVQ
Trigger: CTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp CCAAAGGGGAATCTCCTGTGGGTAGGCCCCGCCGAAAGACTATCCGGTCATGCAGGCACTGGGTTCCTTTaGGTTCGGAACCAATTTCTC +
Preference number: 4 (lower is better)
Translates to: PKGNLLWVGPAERLSGHAGTGFL*VRNQFL
Trigger: GAGAAATTGGTTCCGAACTCAAAGGAACCCAGTGCC...TGCATGACCGGATAGTCTTTCGGCGGGGCCTACCCACAGGAGATTCCCCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp TCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTCCTATGTCAGGACACTaGACAGCCTCCTCAAACCAG +
Preference number: 4 (lower is better)
Translates to: SVTRKGVTPAATPRGSYPPMSGH*TASSNQ
Trigger: CTGGTTTGAGGAGGCTGTTCAGTGTCCTGACATAGG...AGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp TCTCAGATACTCCCGATCAGGGATCACAGAACTCTGGTGGCTGACCACAGCCCCCCTATGTCAGGACACTaGACAGCCTCCTCAAACCAG +
Preference number: 4 (lower is better)
Translates to: SQILPIRDHRTLVADHSPPMSGH*TASSNQ
Trigger: CTGGTTTGAGGAGGCTGTTCAGTGTCCTGACATAGG...GGGGCTGTGGTCAGCCACCAGAGTTCTGTGATCCCTGATCGGGAGTATCTGAGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR TCA 90 bp CATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGATGCAGGCGGTTGGTTTaGCCTTGCCAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: HAGGWFDLARTPSPEGTGCRRLV*PCQNSI
Trigger: GATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCA...TCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp GACATAGCCACCCCAGGATTTTGGCTTGGGCACCTCTTGATCCTGGTAGAGCTGTGCAGGCGGTTGGTTTaGCCTTGCCAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: DIATPGFWLGHLLILVELCRRLV*PCQNSI
Trigger: GATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCA...CAGCTCTACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGCTATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp GCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTTGCAGGCGGTTGGTTTaGCCTTGCCAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: ARTPSPEGTGHSHPRILACRRLV*PCQNSI
Trigger: GATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCA...AGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp GCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATTGCAGGCGGTTGGTTTaGCCTTGCCAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: AGGWFDLARTPSPEGTGHCRRLV*PCQNSI
Trigger: GATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCA...ATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp CTGGGCCAGCAGGTCCCAGAGTTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCGGCAGGAGAATTGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: LGQQVPELRCKSLIEPVFGRRIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCAATTCTCCTGCC...GAAGACTGGCTCTATGAGAGACTTGCACCTTAACTCTGGGACCTGCTGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp ATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACGGCAGGAGAATTGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: MQAVGLTLPELHHLRVQDGRRIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCAATTCTCCTGCC...GTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp GGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTCAGAACTCTGGTGGCTaGCCACAGCCCCAATCTGGC +
Preference number: 4 (lower is better)
Translates to: GRRDPGNCNSSRQRLLVPQNSGG*PQPQSG
Trigger: GCCAGATTGGGGCTGTGGTCAGCCACCAGAGTTCTG...AGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp TGCCCAGGCTGCATTCATATCATAGTAGAGACAGGGTTTTGCCATGCTGGCCAGCAGAACTCTGGTGGCTaGCCACAGCCCCAATCTGGC +
Preference number: 4 (lower is better)
Translates to: CPGCIHIIVETGFCHAGQQNSGG*PQPQSG
Trigger: GCCAGATTGGGGCTGTGGTCAGCCACCAGAGTTCTG...CTGGCCAGCATGGCAAAACCCTGTCTCTACTATGATATGAATGCAGCCTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp GGAGTGGAAGTAGCACTCAGCCTCCTCCTCAGGCAGTTTCTTCACAGGGCCTTCGGTGGCATAAGAAGGTaGCTGAGGAAGCAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GVEVALSLLLRQFLHRAFGGIRR*LRKQEP
Trigger: TGGCTCTTGCTTCCTCAGTCACCTTCTTATGCCACC...GAAGGCCCTGTGAAGAAACTGCCTGAGGAGGAGGCTGAGTGCTACTTCCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR TCA 90 bp ACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTGGGGCTGAGTCTGAGTaGGAGTCAAGGAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: TLPELHHLRVQDIATPGFGAESE*ESRKAF
Trigger: GAAGGCCTTCCTTGACTCTCACTCAGACTCAGCCCC...AAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR TCA 90 bp TGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGTGGGTCATGGGCCCCAACGAAAGGCTGCCTTTTaGACCCATCTTCATTTGCGT +
Preference number: 4 (lower is better)
Translates to: CKSLIEPVFLPAVGHGPQRKAAF*THLHLR
Trigger: ACGCAAATGAAGATGGGTTCAAAAGGCAGCCTTTCG...TTGGGGCCCATGACCCACCGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641323.1
CDS-3UTR GCA 90 bp CATAAACGGCACAGCCTACGGTACAAGAAAAAGGGCAAGGTAGGTAAGGGCACCGGTAACAGACAGGGCTaGTGGGGCCCTGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: HKRHSLRYKKKGKVGKGTGNRQG*WGPVCH
Trigger: GTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACC...GGTGCCCTTACCTACCTTGCCCTTTTTCTTGTACCGTAGGCTGTGCCGTTTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000642017.2
CDS-3UTR GCA 90 bp TGGGTAGGCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTAGAGATCCTGGGAATTaGAATAGCAGCAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: WVGPAERLSGHAGGWFDLRDPGN*NSSRQR
Trigger: CCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCT...AAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGCCTACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR GCA 90 bp ACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTTGGGCAAGCCAGCAGGTTGCTTaGTCATCCAGTCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: TPSPEGTGHSHPRILAWASQQVA*SSSLSL
Trigger: CAGGGACAGACTGGATGAGCAAGCAACCTGCTGGCT...TGCCCAAGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CCA 90 bp TCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTACCAATTTCTCACCCTaGACTTCTACCCCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SVTRKGVTPAATPRGSYPTNFSP*TSTPGK
Trigger: CTTCCCCGGGGTAGAAGTCCAGGGTGAGAAATTGGT...AGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GATTCTCTACGCCACCATTACACTCCACTTGACCAGCTAACTGAGAACCAACTGCACGTGACCCGGCTGTaGCCCGGCACTGGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: DSLRHHYTPLDQLTENQLHVTRL*PGTGFL
Trigger: AAGGAACCCAGTGCCGGGCCACAGCCGGGTCACGTG...CAGTTGGTTCTCAGTTAGCTGGTCAAGTGGAGTGTAATGGTGGCGTAGAGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTTGGGTCCCAGGTCCATaGCAGCACTGCGACCACACA +
Preference number: 4 (lower is better)
Translates to: GRRDPGNCNSSRQRLLVPWVPGP*QHCDHT
Trigger: TGTGTGGTCGCAGTGCTGCCATGGACCTGGGACCCA...AGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGCAAGGTCAATGGGTCCCAGGTCCATaGCAGCACTGCGACCACACA +
Preference number: 4 (lower is better)
Translates to: HRLLPLEGAILINHRQGQWVPGP*QHCDHT
Trigger: TGTGTGGTCGCAGTGCTGCCATGGACCTGGGACCCA...TTGACCTTGCCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAAGGTAACTCTTGCGCATaGGTCCCAGGTCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: TRKGVTPAATPRGSYPNQGNSCA*VPGPWQ
Trigger: CTGCCATGGACCTGGGACCCATGCGCAAGAGTTACC...TTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GGATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTGGTAACTCTTGCGCATaGGTCCCAGGTCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: GSREGEILGIAIAAGRGFGNSCA*VPGPWQ
Trigger: CTGCCATGGACCTGGGACCCATGCGCAAGAGTTACC...AAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGAGCAAACTGTTTCACTaGGTCAAGGGAGGTCAGATG +
Preference number: 4 (lower is better)
Translates to: PIPHPLLTPSPSSTLGQQSKLFH*VKGGQM
Trigger: CATCTGACCTCCCTTGACCCAGTGAAACAGTTTGCT...CTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000641323.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CTCAGGCAGTTTCTTCACAGGGCCTTCCACACGCACCTGACGGTTAAGTGGCTCCCCAGGATTTTGGCTTaGGCACCTCTTGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: LRQFLHRAFHTHLTVKWLPRILA*APLDPG
Trigger: ACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGG...GAGCCACTTAACCGTCAGGTGCGTGTGGAAGGCCCTGTGAAGAAACTGCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp AGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTTGGAAGGGGAATCTCCTGTaGGTAGGCCCCGCCGAAAGA +
Preference number: 4 (lower is better)
Translates to: RTPSPEGTGHSHPRILAWKGNLL*VGPAER
Trigger: TCTTTCGGCGGGGCCTACCCACAGGAGATTCCCCTT...CCAAGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp CCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCTTAGAAAGAAGGGCCTaGGTCCCAATCCCACACCCT +
Preference number: 4 (lower is better)
Translates to: PPKDYPVMQAVGLTLPELLERRA*VPIPHP
Trigger: AGGGTGTGGGATTGGGACCCAGGCCCTTCTTTCTAA...GAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp GGAGTGGAAGTAGCACTCAGCCTCCTCCTCAGGCAGTTTCTTCACAGGGCCTTCTTAGAAAGAAGGGCCTaGGTCCCAATCCCACACCCT +
Preference number: 4 (lower is better)
Translates to: GVEVALSLLLRQFLHRAFLERRA*VPIPHP
Trigger: AGGGTGTGGGATTGGGACCCAGGCCCTTCTTTCTAA...GAAGGCCCTGTGAAGAAACTGCCTGAGGAGGAGGCTGAGTGCTACTTCCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp TCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTTTAGAAAGAAGGGCCTaGGTCCCAATCCCACACCCT +
Preference number: 4 (lower is better)
Translates to: SVTRKGVTPAATPRGSYPLERRA*VPIPHP
Trigger: AGGGTGTGGGATTGGGACCCAGGCCCTTCTTTCTAA...AGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTAACAGACAGGGCTGCTaGGGCCCTGTCTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: GRRDPGNCNSSRQRLLVPNRQGC*GPVCHQ
Trigger: CTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTT...AGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGCAAGGTCAAAACAGACAGGGCTGCTaGGGCCCTGTCTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: HRLLPLEGAILINHRQGQNRQGC*GPVCHQ
Trigger: CTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTT...TTGACCTTGCCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CCCTGTCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTAAAATTAGTTGGGTGTaGTGGCGTGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: PCLSPERESHRLLPLEGAKISWV*WRVPVV
Trigger: GACTACAGGCACACGCCACCACACCCAACTAATTTT...AGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp TGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGTGGGTCATGGGCCCCAAAAAATTAGTTGGGTGTaGTGGCGTGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: CKSLIEPVFLPAVGHGPQKISWV*WRVPVV
Trigger: GACTACAGGCACACGCCACCACACCCAACTAATTTT...TTGGGGCCCATGACCCACCGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp ATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGAAACCCCGTCTCGCTaGGTGTGGTGGCTCATGCCT +
Preference number: 4 (lower is better)
Translates to: IQGRRDPGNCNSSRQRLLETPSR*VWWLMP
Trigger: AGGCATGAGCCACCACACCCAGCGAGACGGGGTTTC...CAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp TGGGTCCCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCATCTTCCTGTCCTATTaGTACCAGCACATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: WVPIPHPLLTPSPSSTLGIFLSY*YQHMKP
Trigger: GGGCTTCATGTGCTGGTACCAATAGGACAGGAAGAT...GCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGGGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATACAATCTGGCTGCTCTTaGGGCGGGAGTGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: QAVGLTLPELHHLRVQDIQSGCS*GGSGSS
Trigger: GCTACTTCCACTCCCGCCCCAAGAGCAGCCAGATTG...TATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp AGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGCAATCTGGCTGCTCTTaGGGCGGGAGTGGAAGTAGC +
Preference number: 4 (lower is better)
Translates to: RESHRLLPLEGAILINHRQSGCS*GGSGSS
Trigger: GCTACTTCCACTCCCGCCCCAAGAGCAGCCAGATTG...CCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATGCACAGTTCACAGAGTaGCAAGCTCAGTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: AGGWFDLARTPSPEGTGHAQFTE*QAQCQP
Trigger: TGGCTGGCACTGAGCTTGCCACTCTGTGAACTGTGC...ATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CCA 90 bp TTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGTGGGTCATGGGCATGCTTGGCTGGCATaGACTCAGGGAGGTTTACTC +
Preference number: 4 (lower is better)
Translates to: LRCKSLIEPVFLPAVGHGHAWLA*TQGGLL
Trigger: GAGTAAACCTCCCTGAGTCCATGCCAGCCAAGCATG...CCCATGACCCACCGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR CCA 90 bp GGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACGAACTCCTCCCCTGGTaGGATGTCTTTGAAGCCCCC +
Preference number: 4 (lower is better)
Translates to: GWFDLARTPSPEGTGHSHELLPW*DVFEAP
Trigger: GGGGGCTTCAAAGACATCCCACCAGGGGAGGAGTTC...GTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641323.1
CDS-3UTR TCA 90 bp GATTCTCTACGCCACCATTACACTCCACTTGACCAGCTAACTGAGAACCAACTGGACCACACAGGTGACTaGGGTAGCCTGGCCACTCGG +
Preference number: 4 (lower is better)
Translates to: DSLRHHYTPLDQLTENQLDHTGD*GSLATR
Trigger: CCGAGTGGCCAGGCTACCTCAGTCACCTGTGTGGTC...CAGTTGGTTCTCAGTTAGCTGGTCAAGTGGAGTGTAATGGTGGCGTAGAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp AGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGACCTATGTCAGGACACTaGACAGCCTCCTCAAACCAG +
Preference number: 4 (lower is better)
Translates to: SMTHMVTDRAAGALSVTRPMSGH*TASSNQ
Trigger: CTGGTTTGAGGAGGCTGTTCAGTGTCCTGACATAGG...TCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp AGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGTGCAGGCGGTTGGTTTaGCCTTGCCAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: RESHRLLPLEGAILINHRCRRLV*PCQNSI
Trigger: GATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCA...CCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp GGATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGCAGGCGGTTGGTTTaGCCTTGCCAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: GSREGEILGIAIAAGRGFCRRLV*PCQNSI
Trigger: GATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCA...AAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp GGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTTCCCACACCCTCTCTTaGCACCTAGCCCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GRRDPGNCNSSRQRLLVPSHTLS*HLALAP
Trigger: TGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGA...AGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp AGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGTGGTTCAATCATCTCTaGGGGTGGGACCCAGGCATC +
Preference number: 4 (lower is better)
Translates to: RESHRLLPLEGAILINHRWFNHL*GWDPGI
Trigger: GATGCCTGGGTCCCACCCTCAGAGATGATTGAACCA...CCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp TTAATGTGCCTTCCTGCACGCAGGCTTAAGAGGGATAAACAAGGAGAGGGCTGCAGTGGGTCTGGGGTCTaGATCTCTAAGGCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LMCLPARRLKRDKQGEGCSGSGV*ISKALP
Trigger: TGGCAGCGCCTTAGAGATTCAGACCCCAGACCCACT...GCAGCCCTCTCCTTGTTTATCCCTCTTAAGCCTGCGTGCAGGAAGGCACATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp GGATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTGCGGATAATAGTGACTaGGGCACAGGTCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: GSREGEILGIAIAAGRGFADNSD*GTGPCR
Trigger: CCTGCATGGACCTGTGCCTCAGTCACTATTATCCGC...AAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp GGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCATGTGGGCTGAGATCTaGAGGAACAGGTCATGGCTG +
Preference number: 4 (lower is better)
Translates to: GGWFDLARTPSPEGTGHSMWAEI*RNRSWL
Trigger: CAGCCATGACCTGTTCCTTCAGATCTCAGCCCACAT...GCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR GCA 90 bp CTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTGGCGGTAACAGACAGGGCTaGTGGGGCCCTGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LGIAIAAGRGFWFLLFPGGNRQG*WGPVCH
Trigger: GTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACC...GCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR GCA 90 bp AGCTTTGGCCAGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCAGAGATCCTGGGAATTaGAATAGCAGCAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SFGQYDSHGNRQGCWGPVRDPGN*NSSRQR
Trigger: CCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCT...GACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACTGGCCAAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR GCA 90 bp TTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGTGGGTCATGGGAGAGATCCTGGGAATTaGAATAGCAGCAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LRCKSLIEPVFLPAVGHGRDPGN*NSSRQR
Trigger: CCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCT...CCCATGACCCACCGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR GCA 90 bp TCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAGAGATCCTGGGAATTaGAATAGCAGCAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SVTRKGVTPAATPRGSYPRDPGN*NSSRQR
Trigger: CCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCT...AGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR GCA 90 bp ATTTTTCTTTCTCAGATACTCCCGATCAGGGATCACAGAACTCTGGTGGCTGACGGCAGGGGGAGGAACTaGACAGCCCAGACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: IFLSQILPIRDHRTLVADGRGRN*TAQTWE
Trigger: CTCCCAGGTCTGGGCTGTGCAGTTCCTCCCCCTGCC...GTCAGCCACCAGAGTTCTGTGATCCCTGATCGGGAGTATCTGAGAAAGAAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR GCA 90 bp TATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAAAAGCCAGCAGGTTGCTTaGTCATCCAGTCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: YDSHGNRQGCWGPVCHQKSQQVA*SSSLSL
Trigger: CAGGGACAGACTGGATGAGCAAGCAACCTGCTGGCT...TTTCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR GCA 90 bp AGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGAGCCAGCAGGTTGCTTaGTCATCCAGTCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: RESHRLLPLEGAILINHRSQQVA*SSSLSL
Trigger: CAGGGACAGACTGGATGAGCAAGCAACCTGCTGGCT...CCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR GCA 90 bp GCTATGAATGACTTGGCTTTAATGACTCCCAAGGTTCTGGATCTCTCCAGTTCACACCCAACACCCTCCTaGCTGCAGGGGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: AMNDLALMTPKVLDLSSSHPTPS*LQGATG
Trigger: CCCTGTGGCCCCCTGCAGGCAGGAGGGTGTTGGGTG...TGAACTGGAGAGATCCAGAACCTTGGGAGTCATTAAAGCCAAGTCATTCATAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR GCA 90 bp ACTGAGTACAGAGAACTTAGAGGATTAGCTCTGAAGAGTCCTGAAGATAAGGGGCACCCAACACCCTCCTaGCTGCAGGGGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: TEYRELRGLALKSPEDKGHPTPS*LQGATG
Trigger: CCCTGTGGCCCCCTGCAGGCAGGAGGGTGTTGGGTG...CCCCTTATCTTCAGGACTCTTCAGAGCTAATCCTCTAAGTTCTCTGTACTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp AGCAGCAACATGCGAGCAGAGGGTTTTCCATCTCTGGTGCAGGTAGCCAGACACACCAATTTCTCACCCTaGACTTCTACCCCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SSNMRAEGFPSLVQVARHTNFSP*TSTPGK
Trigger: CTTCCCCGGGGTAGAAGTCCAGGGTGAGAAATTGGT...GTGTCTGGCTACCTGCACCAGAGATGGAAAACCCTCTGCTCGCATGTTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CCA 90 bp CTTGGAGAAGGCCTGCGGATAATAGTGACTGAGGCACAGGTCCATGCAGGGGAAACCAATTTCTCACCCTaGACTTCTACCCCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LGEGLRIIVTEAQVHAGETNFSP*TSTPGK
Trigger: CTTCCCCGGGGTAGAAGTCCAGGGTGAGAAATTGGT...TTCCCCTGCATGGACCTGTGCCTCAGTCACTATTATCCGCAGGCCTTCTCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp TGGGCACCTCTTGATCCTGGTAGAGCTGTTCCAGTTCCTCATTTTTCTTTCTCACACGTGACCCGGCTGTaGCCCGGCACTGGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: WAPLDPGRAVPVPHFSFSHVTRL*PGTGFL
Trigger: AAGGAACCCAGTGCCGGGCCACAGCCGGGTCACGTG...TGAGAAAGAAAAATGAGGAACTGGAACAGCTCTACCAGGATCAAGAGGTGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp GTCCTGAAGATAAGGGGTAGGGAGGGAAATGGGTTGAGTTTAGAAAGAAGGGCCTGGGTCCCAGGTCCATaGCAGCACTGCGACCACACA +
Preference number: 4 (lower is better)
Translates to: VLKIRGREGNGLSLERRAWVPGP*QHCDHT
Trigger: TGTGTGGTCGCAGTGCTGCCATGGACCTGGGACCCA...GGCCCTTCTTTCTAAACTCAACCCATTTCCCTCCCTACCCCTTATCTTCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGGTAACTCTTGCGCATaGGTCCCAGGTCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: IQGRRDPGNCNSSRQRLLGNSCA*VPGPWQ
Trigger: CTGCCATGGACCTGGGACCCATGCGCAAGAGTTACC...CAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GGACATAGCCACCCCAGGATTTTGGCTTGGGCACCTCTTGATCCTGGTAGAGCTCCCAGGATTTTGGCTTaGGCACCTCTTGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: GHSHPRILAWAPLDPGRAPRILA*APLDPG
Trigger: ACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGG...AGCTCTACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGCTATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp ATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAAAGCCCAGGATTTTGGCTTaGGCACCTCTTGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: MTHMVTDRAAGALSVTRKPRILA*APLDPG
Trigger: ACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGG...CTTTCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp AGAGTTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGTGGGTCACCCAGGATTTTGGCTTaGGCACCTCTTGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: RVKVQVSHRASLPPRGGSPRILA*APLDPG
Trigger: ACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGG...TGACCCACCGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp TTTGGCCAGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCCCAGGATTTTGGCTTaGGCACCTCTTGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: FGQYDSHGNRQGCWGPVCPRILA*APLDPG
Trigger: ACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGG...ACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACTGGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp AGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGGCCACCCCAGGATTTTaGCTTGGGCACCTCTTGATC +
Preference number: 4 (lower is better)
Translates to: RESHRLLPLEGAILINHRATPGF*LGHLLI
Trigger: GATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGC...CCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTGCCACCCCAGGATTTTaGCTTGGGCACCTCTTGATC +
Preference number: 4 (lower is better)
Translates to: TLPELHHLRVQDIATPGFATPGF*LGHLLI
Trigger: GATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGC...AAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp TCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCGGTCATGCAGGCGGTTaGTTTGACCTTGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: SPERESHRLLPLEGAILIGHAGG*FDLART
Trigger: AGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACC...GATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTTGGGCAGGTCATGCAGGCGGTTaGTTTGACCTTGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: TPSPEGTGHSHPRILAWAGHAGG*FDLART
Trigger: AGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACC...TGCCCAAGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp GCAGGGTCAGATTCAGTGGGTCTGGGGTCTGAATCTCTAAGGCGCTGCCAAGTGGCAGGCAGAGGCTTTTaGTTCCTATTGTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: AGSDSVGLGSESLRRCQVAGRGF*FLLFPG
Trigger: GCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGC...CACTTGGCAGCGCCTTAGAGATTCAGACCCCAGACCCACTGAATCTGACCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CTCAGGCAGTTTCTTCACAGGGCCTTCCACACGCACCTGACGGTTAAGTGGCTCGCAGGCAGAGGCTTTTaGTTCCTATTGTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LRQFLHRAFHTHLTVKWLAGRGF*FLLFPG
Trigger: GCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGC...GAGCCACTTAACCGTCAGGTGCGTGTGGAAGGCCCTGTGAAGAAACTGCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp CAGGTCCCAGAGTTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGCACCTGACGGTTAAGTaGCTCCCAGTAGAAGACAAG +
Preference number: 4 (lower is better)
Translates to: QVPELRCKSLIEPVFLPAHLTVK*LPVEDK
Trigger: CTTGTCTTCTACTGGGAGCCACTTAACCGTCAGGTG...CGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAACTCTGGGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp AAGGCAGCAATCAGTAGGGGAAGTGCTATAAAAATATACTATCCCGGCCAAGCGGACCACACAGGTGACTaGGGTAGCCTGGCCACTCGG +
Preference number: 4 (lower is better)
Translates to: KAAISRGSAIKIYYPGQADHTGD*GSLATR
Trigger: CCGAGTGGCCAGGCTACCTCAGTCACCTGTGTGGTC...CGCTTGGCCGGGATAGTATATTTTTATAGCACTTCCCCTACTGATTGCTGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp CTTGGAGAAGGCCTGCGGATAATAGTGACTGAGGCACAGGTCCATGCAGGGGAATCAAGGGAGGTCAGATaGGTCTCCTCAAATGCCTCT +
Preference number: 4 (lower is better)
Translates to: LGEGLRIIVTEAQVHAGESREVR*VSSNAS
Trigger: AGAGGCATTTGAGGAGACTCATCTGACCTCCCTTGA...TTCCCCTGCATGGACCTGTGCCTCAGTCACTATTATCCGCAGGCCTTCTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642017.2
CDS-3UTR TCA 90 bp TGGGGCGGGAGTGGAAGTAGCACTCAGCCTCCTCCTCAGGCAGTTTCTTCACAGATTGACAAAACAATCTaGTTGGCCAGGTTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: WGGSGSSTQPPPQAVSSQIDKTI*LARLAQ
Trigger: CTGAGCCAACCTGGCCAATCAGATTGTTTTGTCAAT...CTGTGAAGAAACTGCCTGAGGAGGAGGCTGAGTGCTACTTCCACTCCCGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp TCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTCCTGGCTGCTATGAATaGCTTGGCTTTAATGACTCC +
Preference number: 4 (lower is better)
Translates to: SVTRKGVTPAATPRGSYPPGCYE*LGFNDS
Trigger: GGAGTCATTAAAGCCAAGTCATTCATAGCAGCCAGG...AGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp CATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTTGGGCACCTCCCTGGCTGCTATGAATaGCTTGGCTTTAATGACTCC +
Preference number: 4 (lower is better)
Translates to: HHLRVQDIATPGFWLGHLPGCYE*LGFNDS
Trigger: GGAGTCATTAAAGCCAAGTCATTCATAGCAGCCAGG...GAGGTGCCCAAGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp TGGGTCCCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCATTGGTACCAGCACATaGAGCCCTTCTACAAAATTC +
Preference number: 4 (lower is better)
Translates to: WVPIPHPLLTPSPSSTLGIGTST*SPSTKF
Trigger: GAATTTTGTAGAAGGGCTTCATGTGCTGGTACCAAT...GCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGGGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp GGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCAAGGATCATAGACTGTaGGGGTGGGAGGTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: GGWFDLARTPSPEGTGHSKDHRL*GWEVLV
Trigger: AACCAAGACCTCCCACCCTCACAGTCTATGATCCTT...GCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR GCA 90 bp GCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGAGATCCTGGGAATTaGAATAGCAGCAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: AGGWFDLARTPSPEGTGHRDPGN*NSSRQR
Trigger: CCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCT...ATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR GCA 90 bp GCTATGAATGACTTGGCTTTAATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAGGCAGGGGGAGGAACTaGACAGCCCAGACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: AMNDLALMTPKVLDLSSSGRGRN*TAQTWE
Trigger: CTCCCAGGTCTGGGCTGTGCAGTTCCTCCCCCTGCC...TGAACTGGAGAGATCCAGAACCTTGGGAGTCATTAAAGCCAAGTCATTCATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR GCA 90 bp ATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGAGTGGCAAGCTCAGTaGCAGCCAGTGCAAGCAACA +
Preference number: 4 (lower is better)
Translates to: IQGRRDPGNCNSSRQRLLEWQAQ*QPVQAT
Trigger: TGTTGCTTGCACTGGCTGGCACTGAGCTTGCCACTC...CAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR GCA 90 bp ATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAAAGGAACCCATCTTCATTTaGGTTTCCCCGGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: MTHMVTDRAAGALSVTRKEPIFI*VSPELL
Trigger: GAGGAGTTCCGGGGAAACGCAAATGAAGATGGGTTC...CTTTCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641323.1
CDS-3UTR CCA 90 bp AGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTTGGACCAATTTCTCACCCTaGACTTCTACCCCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RTPSPEGTGHSHPRILAWTNFSP*TSTPGK
Trigger: CTTCCCCGGGGTAGAAGTCCAGGGTGAGAAATTGGT...CCAAGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CCA 90 bp GCTATGAATGACTTGGCTTTAATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAGTGACTGAGGTAGCCTaGCCACTCGGCAGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: AMNDLALMTPKVLDLSSSVTEVA*PLGRSP
Trigger: GGGCGACCTGCCGAGTGGCCAGGCTACCTCAGTCAC...TGAACTGGAGAGATCCAGAACCTTGGGAGTCATTAAAGCCAAGTCATTCATAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp AGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGCCCAGGATTTTGGCTTaGGCACCTCTTGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: RESHRLLPLEGAILINHRPRILA*APLDPG
Trigger: ACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGG...CCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp TATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAAACCCAGGATTTTGGCTTaGGCACCTCTTGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: YDSHGNRQGCWGPVCHQKPRILA*APLDPG
Trigger: ACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGG...TTTCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGCAAGGTCAAGCCACCCCAGGATTTTaGCTTGGGCACCTCTTGATC +
Preference number: 4 (lower is better)
Translates to: HRLLPLEGAILINHRQGQATPGF*LGHLLI
Trigger: GATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGC...TTGACCTTGCCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GGATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTGGTCATGCAGGCGGTTaGTTTGACCTTGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: GSREGEILGIAIAAGRGFGHAGG*FDLART
Trigger: AGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACC...AAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp AGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAGCAGGCAGAGGCTTTTaGTTCCTATTGTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: SMTHMVTDRAAGALSVTRAGRGF*FLLFPG
Trigger: GCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGC...TCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp AGCAGCAACATGCGAGCAGAGGGTTTTCCATCTCTGGTGCAGGTAGCCAGACACGTGCAGCTGATCACCTaGGGTCTAGTGAAAATGCAG +
Preference number: 4 (lower is better)
Translates to: SSNMRAEGFPSLVQVARHVQLIT*GLVKMQ
Trigger: CTGCATTTTCACTAGACCCCAGGTGATCAGCTGCAC...GTGTCTGGCTACCTGCACCAGAGATGGAAAACCCTCTGCTCGCATGTTGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CCA 90 bp ATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAAAGGTGCAGCTGATCACCTaGGGTCTAGTGAAAATGCAG +
Preference number: 4 (lower is better)
Translates to: MTHMVTDRAAGALSVTRKVQLIT*GLVKMQ
Trigger: CTGCATTTTCACTAGACCCCAGGTGATCAGCTGCAC...CTTTCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTTGGGCAAACATTTACCCAGCCTaGCTCTTCTCCATAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TPSPEGTGHSHPRILAWANIYPA*LFSIAS
Trigger: GCTGGCTATGGAGAAGAGCCAGGCTGGGTAAATGTT...TGCCCAAGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CCA 90 bp CTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTGGCGGAGAGGGCTGCCCTTaGAGAAGGCCTGCGGATAAT +
Preference number: 4 (lower is better)
Translates to: LGIAIAAGRGFWFLLFPGGEGCP*RRPADN
Trigger: ATTATCCGCAGGCCTTCTCCAAGGGCAGCCCTCTCC...GCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAAAGCACCTGACGGTTAAGTaGCTCCCAGTAGAAGACAAG +
Preference number: 4 (lower is better)
Translates to: MTHMVTDRAAGALSVTRKHLTVK*LPVEDK
Trigger: CTTGTCTTCTACTGGGAGCCACTTAACCGTCAGGTG...CTTTCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp TTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGACACCTGACGGTTAAGTaGCTCCCAGTAGAAGACAAG +
Preference number: 4 (lower is better)
Translates to: LTLPELHHLRVQDIATPGHLTVK*LPVEDK
Trigger: CTTGTCTTCTACTGGGAGCCACTTAACCGTCAGGTG...TCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp TATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAAAGGCACTGGGTTCCTTTaGGTTCGGAACCAATTTCTC +
Preference number: 4 (lower is better)
Translates to: YDSHGNRQGCWGPVCHQKGTGFL*VRNQFL
Trigger: GAGAAATTGGTTCCGAACTCAAAGGAACCCAGTGCC...TTTCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp AGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGGGCACTGGGTTCCTTTaGGTTCGGAACCAATTTCTC +
Preference number: 4 (lower is better)
Translates to: RESHRLLPLEGAILINHRGTGFL*VRNQFL
Trigger: GAGAAATTGGTTCCGAACTCAAAGGAACCCAGTGCC...CCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp AGCTCTTTTCCTTTTCGACTCTCGAAGTTAGTGAAGAAGCGGAAGCCATCTTTCGACCACACAGGTGACTaGGGTAGCCTGGCCACTCGG +
Preference number: 4 (lower is better)
Translates to: SSFPFRLSKLVKKRKPSFDHTGD*GSLATR
Trigger: CCGAGTGGCCAGGCTACCTCAGTCACCTGTGTGGTC...GAAAGATGGCTTCCGCTTCTTCACTAACTTCGAGAGTCGAAAAGGAAAAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR TCA 90 bp CATAAACGGCACAGCCTACGGTACAAGAAAAAGGGCAAGGTAGGTAAGGGCACCCCTATGTCAGGACACTaGACAGCCTCCTCAAACCAG +
Preference number: 4 (lower is better)
Translates to: HKRHSLRYKKKGKVGKGTPMSGH*TASSNQ
Trigger: CTGGTTTGAGGAGGCTGTTCAGTGTCCTGACATAGG...GGTGCCCTTACCTACCTTGCCCTTTTTCTTGTACCGTAGGCTGTGCCGTTTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000642017.2
CDS-3UTR TCA 90 bp TCTTGGGGCGGGAGTGGAAGTAGCACTCAGCCTCCTCCTCAGGCAGTTTCTTCAATTGACAAAACAATCTaGTTGGCCAGGTTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SWGGSGSSTQPPPQAVSSIDKTI*LARLAQ
Trigger: CTGAGCCAACCTGGCCAATCAGATTGTTTTGTCAAT...TGAAGAAACTGCCTGAGGAGGAGGCTGAGTGCTACTTCCACTCCCGCCCCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp CACGCAGGCTTAAGAGGGATAAACAAGGAGAGGGCTGCCCTTGGAGAAGGCCTGATTGACAAAACAATCTaGTTGGCCAGGTTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: HAGLRGINKERAALGEGLIDKTI*LARLAQ
Trigger: CTGAGCCAACCTGGCCAATCAGATTGTTTTGTCAAT...CAGGCCTTCTCCAAGGGCAGCCCTCTCCTTGTTTATCCCTCTTAAGCCTGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp GACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGCCTGGCTGCTATGAATaGCTTGGCTTTAATGACTCC +
Preference number: 4 (lower is better)
Translates to: DYPVMQAVGLTLPELHHLPGCYE*LGFNDS
Trigger: GGAGTCATTAAAGCCAAGTCATTCATAGCAGCCAGG...CAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp ACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAACAACAGGCAGTTCTTTaGTCCTGGCTTAGTCACAGC +
Preference number: 4 (lower is better)
Translates to: TRKGVTPAATPRGSYPNQQQAVL*SWLSHS
Trigger: GCTGTGACTAAGCCAGGATCAAAGAACTGCCTGTTG...TTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp ATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTCCTTCCACACGCACCTaGCGGTTAAGTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ILGIAIAAGRGFWFLLFPPSTRT*RLSGSQ
Trigger: CTGGGAGCCACTTAACCGTCAGGTGCGTGTGGAAGG...AGGAAACAATAGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp CATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTTGGGCACCTCCAGATTTGTGAGTCTTaGGAAATGCATGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: HHLRVQDIATPGFWLGHLQICES*EMHAWL
Trigger: CAGCCAAGCATGCATTTCTCAAGACTCACAAATCTG...GAGGTGCCCAAGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR GCA 90 bp TATTGGTACCAGCACATGAAGCCCTTCTACAAAATTCCTGACGGACTGGGAATACCCCGCGGTAACTCTTaGGCATGGGTCCCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: YWYQHMKPFYKIPDGLGIPRGNS*AWVPGP
Trigger: TGGACCTGGGACCCATGCGCAAGAGTTACCGCGGGG...TATTCCCAGTCCGTCAGGAATTTTGTAGAAGGGCTTCATGTGCTGGTACCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR GCA 90 bp AGCTCTTTTCCTTTTCGACTCTCGAAGTTAGTGAAGAAGCGGAAGCCATCTTTCCAGCCCCAATCTGGCTaGTCTTGGGGCGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: SSFPFRLSKLVKKRKPSFQPQSG*SWGGSG
Trigger: TCCACTCCCGCCCCAAGAGCAGCCAGATTGGGGCTG...GAAAGATGGCTTCCGCTTCTTCACTAACTTCGAGAGTCGAAAAGGAAAAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR GCA 90 bp TTAATGTGCCTTCCTGCACGCAGGCTTAAGAGGGATAAACAAGGAGAGGGCTGCGACAGGGTTTTGCCATaGTGGCCAGGCTGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: LMCLPARRLKRDKQGEGCDRVLP*WPGWFN
Trigger: ATTGAACCAGCCTGGCCAGCATGGCAAAACCCTGTC...GCAGCCCTCTCCTTGTTTATCCCTCTTAAGCCTGCGTGCAGGAAGGCACATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGCAAGGTCAAACCAATTTCTCACCCTaGACTTCTACCCCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: HRLLPLEGAILINHRQGQTNFSP*TSTPGK
Trigger: CTTCCCCGGGGTAGAAGTCCAGGGTGAGAAATTGGT...TTGACCTTGCCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTTGGGCAAGCAAACTGTTTCACTaGGTCAAGGGAGGTCAGATG +
Preference number: 4 (lower is better)
Translates to: TPSPEGTGHSHPRILAWASKLFH*VKGGQM
Trigger: CATCTGACCTCCCTTGACCCAGTGAAACAGTTTGCT...TGCCCAAGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641323.1
CDS-3UTR CCA 90 bp GGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTCCAGACACATGGCATTaGCTTCCCCTATGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: GRRDPGNCNSSRQRLLVPPDTWH*LPLCQD
Trigger: GTCCTGACATAGGGGAAGCCAATGCCATGTGTCTGG...AGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp TTCCACACGCACCTGACGGTTAAGTGGCTCCCAGTAGAAGACAAGGGAAGCAAATTAGAAAGAAGGGCCTaGGTCCCAATCCCACACCCT +
Preference number: 4 (lower is better)
Translates to: FHTHLTVKWLPVEDKGSKLERRA*VPIPHP
Trigger: AGGGTGTGGGATTGGGACCCAGGCCCTTCTTTCTAA...TTTGCTTCCCTTGTCTTCTACTGGGAGCCACTTAACCGTCAGGTGCGTGTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp GGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTTTAGAAAGAAGGGCCTaGGTCCCAATCCCACACCCT +
Preference number: 4 (lower is better)
Translates to: GRRDPGNCNSSRQRLLVPLERRA*VPIPHP
Trigger: AGGGTGTGGGATTGGGACCCAGGCCCTTCTTTCTAA...AGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTAACAGACAGGGCTGCTaGGGCCCTGTCTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: ILGIAIAAGRGFWFLLFPNRQGC*GPVCHQ
Trigger: CTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTT...AGGAAACAATAGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAAGCAGGCAGAGGCTTTTaGTTCCTATTGTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: TRKGVTPAATPRGSYPNQAGRGF*FLLFPG
Trigger: GCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGC...TTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp TTTGGCCAGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTAAAATTAGTTGGGTGTaGTGGCGTGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: FGQYDSHGNRQGCWGPVCKISWV*WRVPVV
Trigger: GACTACAGGCACACGCCACCACACCCAACTAATTTT...ACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACTGGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTTGGGCAAAAATTAGTTGGGTGTaGTGGCGTGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: TPSPEGTGHSHPRILAWAKISWV*WRVPVV
Trigger: GACTACAGGCACACGCCACCACACCCAACTAATTTT...TGCCCAAGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp CTGGGCCAGCAGGTCCCAGAGTTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCAGGAGGTCTCAACCTTaGCTGCACAGAATTATCTGG +
Preference number: 4 (lower is better)
Translates to: LGQQVPELRCKSLIEPVFRRSQP*LHRIIW
Trigger: CCAGATAATTCTGTGCAGCCAAGGTTGAGACCTCCT...GAAGACTGGCTCTATGAGAGACTTGCACCTTAACTCTGGGACCTGCTGGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CCA 90 bp ATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGATGCTCCTGGCTTGTaGACCACCCTGTGTATAGCA +
Preference number: 4 (lower is better)
Translates to: IQGRRDPGNCNSSRQRLLDAPGL*TTLCIA
Trigger: TGCTATACACAGGGTGGTCCACAAGCCAGGAGCATC...CAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGCAAGGTCAACAGGGTCAGATTCAGTaGGTCTGGGGTCTGAATCTC +
Preference number: 4 (lower is better)
Translates to: HRLLPLEGAILINHRQGQQGQIQ*VWGLNL
Trigger: GAGATTCAGACCCCAGACCCACTGAATCTGACCCTG...TTGACCTTGCCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp ATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGTCAAGGGAGGTCAGATaGGTCTCCTCAAATGCCTCT +
Preference number: 4 (lower is better)
Translates to: IQGRRDPGNCNSSRQRLLSREVR*VSSNAS
Trigger: AGAGGCATTTGAGGAGACTCATCTGACCTCCCTTGA...CAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225573.5
ENST00000642017.2
CDS-3UTR TCA 90 bp GATTCTCTACGCCACCATTACACTCCACTTGACCAGCTAACTGAGAACCAACTGTGCAGGCGGTTGGTTTaGCCTTGCCAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: DSLRHHYTPLDQLTENQLCRRLV*PCQNSI
Trigger: GATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCA...CAGTTGGTTCTCAGTTAGCTGGTCAAGTGGAGTGTAATGGTGGCGTAGAGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp GACACACATCACTTACTCATAAACGGCACAGCCTACGGTACAAGAAAAAGGGCATCCCACACCCTCTCTTaGCACCTAGCCCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: DTHHLLINGTAYGTRKRASHTLS*HLALAP
Trigger: TGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGA...TGCCCTTTTTCTTGTACCGTAGGCTGTGCCGTTTATGAGTAAGTGATGTGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000642017.2
CDS-3UTR TCA 90 bp GGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCATTGACAAAACAATCTaGTTGGCCAGGTTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GGWFDLARTPSPEGTGHSIDKTI*LARLAQ
Trigger: CTGAGCCAACCTGGCCAATCAGATTGTTTTGTCAAT...GCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp AGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAATTGACAAAACAATCTaGTTGGCCAGGTTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SMTHMVTDRAAGALSVTRIDKTI*LARLAQ
Trigger: CTGAGCCAACCTGGCCAATCAGATTGTTTTGTCAAT...TCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp CTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGCCTGGCTGCTATGAATaGCTTGGCTTTAATGACTCC +
Preference number: 4 (lower is better)
Translates to: LARTPSPEGTGHSHPRILPGCYE*LGFNDS
Trigger: GGAGTCATTAAAGCCAAGTCATTCATAGCAGCCAGG...CAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp AGCTTTGGCCAGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCATTGGTACCAGCACATaGAGCCCTTCTACAAAATTC +
Preference number: 4 (lower is better)
Translates to: SFGQYDSHGNRQGCWGPVIGTST*SPSTKF
Trigger: GAATTTTGTAGAAGGGCTTCATGTGCTGGTACCAAT...GACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACTGGCCAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp ATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGCAACAGGCAGTTCTTTaGTCCTGGCTTAGTCACAGC +
Preference number: 4 (lower is better)
Translates to: IQGRRDPGNCNSSRQRLLQQAVL*SWLSHS
Trigger: GCTGTGACTAAGCCAGGATCAAAGAACTGCCTGTTG...CAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp GCTATGAATGACTTGGCTTTAATGACTCCCAAGGTTCTGGATCTCTCCAGTTCACCTTCCACACGCACCTaGCGGTTAAGTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: AMNDLALMTPKVLDLSSSPSTRT*RLSGSQ
Trigger: CTGGGAGCCACTTAACCGTCAGGTGCGTGTGGAAGG...TGAACTGGAGAGATCCAGAACCTTGGGAGTCATTAAAGCCAAGTCATTCATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR GCA 90 bp TGGTTAGAAAGTGCATTCATTCATTTATGGCAAAGAGCACAGCAAGTGCCAAGGCAGCCCCAATCTGGCTaGTCTTGGGGCGGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: WLESAFIHLWQRAQQVPRQPQSG*SWGGSG
Trigger: TCCACTCCCGCCCCAAGAGCAGCCAGATTGGGGCTG...CCTTGGCACTTGCTGTGCTCTTTGCCATAAATGAATGAATGCACTTTCTAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR CCA 90 bp GATTCTCTACGCCACCATTACACTCCACTTGACCAGCTAACTGAGAACCAACTGGCCACCCCAGGATTTTaGCTTGGGCACCTCTTGATC +
Preference number: 4 (lower is better)
Translates to: DSLRHHYTPLDQLTENQLATPGF*LGHLLI
Trigger: GATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGC...CAGTTGGTTCTCAGTTAGCTGGTCAAGTGGAGTGTAATGGTGGCGTAGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp AAGGCAGCAATCAGTAGGGGAAGTGCTATAAAAATATACTATCCCGGCCAAGCGAAGGGGAATCTCCTGTaGGTAGGCCCCGCCGAAAGA +
Preference number: 4 (lower is better)
Translates to: KAAISRGSAIKIYYPGQAKGNLL*VGPAER
Trigger: TCTTTCGGCGGGGCCTACCCACAGGAGATTCCCCTT...CGCTTGGCCGGGATAGTATATTTTTATAGCACTTCCCCTACTGATTGCTGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp AGCTTTGGCCAGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCAATACAAAAATTAGTTaGGTGTGGTGGCGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: SFGQYDSHGNRQGCWGPVNTKIS*VWWRVP
Trigger: AGGCACACGCCACCACACCCAACTAATTTTTGTATT...GACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACTGGCCAAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTGGCGATGCTCCTGGCTTGTaGACCACCCTGTGTATAGCA +
Preference number: 4 (lower is better)
Translates to: LGIAIAAGRGFWFLLFPGDAPGL*TTLCIA
Trigger: TGCTATACACAGGGTGGTCCACAAGCCAGGAGCATC...GCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTGCAGCTGATCACCTaGGGTCTAGTGAAAATGCAG +
Preference number: 4 (lower is better)
Translates to: IQGRRDPGNCNSSRQRLLVQLIT*GLVKMQ
Trigger: CTGCATTTTCACTAGACCCCAGGTGATCAGCTGCAC...CAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp AGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCACCTGACGGTTAAGTaGCTCCCAGTAGAAGACAAG +
Preference number: 4 (lower is better)
Translates to: REGEILGIAIAAGRGFWFHLTVK*LPVEDK
Trigger: CTTGTCTTCTACTGGGAGCCACTTAACCGTCAGGTG...GAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR CAA 72 bp AAAGACTATCCGGTCATGCAGGCGGTTGGTTTGACCTaGCCAGAACTCCATCACCTGAGGGTACAGGACATA +
Preference number: 4 (lower is better)
Translates to: KDYPVMQAVGLT*PELHHLRVQDI
Trigger: TATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp GTCCTGAAGATAAGGGGTAGGGAGGGAAATGGGTTGAGTTTAGAAAGAAGGGCCTCAAGGGAGGTCAGATaGGTCTCCTCAAATGCCTCT +
Preference number: 4 (lower is better)
Translates to: VLKIRGREGNGLSLERRASREVR*VSSNAS
Trigger: AGAGGCATTTGAGGAGACTCATCTGACCTCCCTTGA...GGCCCTTCTTTCTAAACTCAACCCATTTCCCTCCCTACCCCTTATCTTCAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000642017.2
CDS-3UTR TCA 90 bp GGATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTATTGACAAAACAATCTaGTTGGCCAGGTTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GSREGEILGIAIAAGRGFIDKTI*LARLAQ
Trigger: CTGAGCCAACCTGGCCAATCAGATTGTTTTGTCAAT...AAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp ATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTGGCAGGAGAATTGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: ILGIAIAAGRGFWFLLFPGRRIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCAATTCTCCTGCC...AGGAAACAATAGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp AAGGCAGCAATCAGTAGGGGAAGTGCTATAAAAATATACTATCCCGGCCAAGCGGGCAGGAGAATTGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: KAAISRGSAIKIYYPGQAGRRIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCAATTCTCCTGCC...CGCTTGGCCGGGATAGTATATTTTTATAGCACTTCCCCTACTGATTGCTGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp GACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTATTGGTACCAGCACATaGAGCCCTTCTACAAAATTC +
Preference number: 4 (lower is better)
Translates to: DLARTPSPEGTGHSHPRIIGTST*SPSTKF
Trigger: GAATTTTGTAGAAGGGCTTCATGTGCTGGTACCAAT...AATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR GCA 90 bp GATTCTCTACGCCACCATTACACTCCACTTGACCAGCTAACTGAGAACCAACTGGACAGGGTTTTGCCATaGTGGCCAGGCTGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: DSLRHHYTPLDQLTENQLDRVLP*WPGWFN
Trigger: ATTGAACCAGCCTGGCCAGCATGGCAAAACCCTGTC...CAGTTGGTTCTCAGTTAGCTGGTCAAGTGGAGTGTAATGGTGGCGTAGAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR GCA 90 bp TCCAGCTCTTTTCCTTTTCGACTCTCGAAGTTAGTGAAGAAGCGGAAGCCATCTGCCACAGGGTTAATGTaGCTTCCTGCACGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SSSFPFRLSKLVKKRKPSATGLM*LPARRL
Trigger: AAGCCTGCGTGCAGGAAGGCACATTAACCCTGTGGC...AGATGGCTTCCGCTTCTTCACTAACTTCGAGAGTCGAAAAGGAAAAGAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR GCA 90 bp GCTCTTCTCCATAGCCAGCAGGTTGCTTGCTCATCCAGTCTGTCCCTGGTTAGCATAACACAAGGTGAGTaGAGCACTTCTAGACACACA +
Preference number: 4 (lower is better)
Translates to: ALLHSQQVACSSSLSLVSITQGE*STSRHT
Trigger: TGTGTGTCTAGAAGTGCTGCACTCACCTTGTGTTAT...GCTAACCAGGGACAGACTGGATGAGCAAGCAACCTGCTGGCTATGGAGAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000642017.2
CDS-3UTR CCA 90 bp TATTGGTACCAGCACATGAAGCCCTTCTACAAAATTCCTGACGGACTGGGAATAGGTAACTCTTGCGCATaGGTCCCAGGTCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: YWYQHMKPFYKIPDGLGIGNSCA*VPGPWQ
Trigger: CTGCCATGGACCTGGGACCCATGCGCAAGAGTTACC...TATTCCCAGTCCGTCAGGAATTTTGTAGAAGGGCTTCATGTGCTGGTACCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GATTCTCTACGCCACCATTACACTCCACTTGACCAGCTAACTGAGAACCAACTGGGTCATGCAGGCGGTTaGTTTGACCTTGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: DSLRHHYTPLDQLTENQLGHAGG*FDLART
Trigger: AGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACC...CAGTTGGTTCTCAGTTAGCTGGTCAAGTGGAGTGTAATGGTGGCGTAGAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GACATAGCCACCCCAGGATTTTGGCTTGGGCACCTCTTGATCCTGGTAGAGCTGAATACAAAAATTAGTTaGGTGTGGTGGCGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: DIATPGFWLGHLLILVELNTKIS*VWWRVP
Trigger: AGGCACACGCCACCACACCCAACTAATTTTTGTATT...CAGCTCTACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGCTATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp ATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGATCTTCCTGTCCTATTaGTACCAGCACATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: IQGRRDPGNCNSSRQRLLIFLSY*YQHMKP
Trigger: GGGCTTCATGTGCTGGTACCAATAGGACAGGAAGAT...CAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATCTTCCTGTCCTATTaGTACCAGCACATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GRRDPGNCNSSRQRLLVPIFLSY*YQHMKP
Trigger: GGGCTTCATGTGCTGGTACCAATAGGACAGGAAGAT...AGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTAGGAGGTCTCAACCTTaGCTGCACAGAATTATCTGG +
Preference number: 4 (lower is better)
Translates to: GRRDPGNCNSSRQRLLVPRRSQP*LHRIIW
Trigger: CCAGATAATTCTGTGCAGCCAAGGTTGAGACCTCCT...AGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR CAA 72 bp GACATAGCCACCCCAGGATTTTGGCTTGGGCACCTCTaGATCCTGGTAGAGCTGTTCCAGTTCCTCATTTTT +
Preference number: 4 (lower is better)
Translates to: DIATPGFWLGHL*ILVELFQFLIF
Trigger: AAAAATGAGGAACTGGAACAGCTCTACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGCTATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR TCA 90 bp GGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTGGCTGCCTGGCTGCTATGAATaGCTTGGCTTTAATGACTCC +
Preference number: 4 (lower is better)
Translates to: GNCNSSRQRLLVPIVSWLPGCYE*LGFNDS
Trigger: GGAGTCATTAAAGCCAAGTCATTCATAGCAGCCAGG...CAGCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp TCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTCTTCTACAAAATTCCTaGCGGACTGGGAATAAAAAT +
Preference number: 4 (lower is better)
Translates to: SVTRKGVTPAATPRGSYPLLQNS*RTGNKN
Trigger: ATTTTTATTCCCAGTCCGTCAGGAATTTTGTAGAAG...AGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp GCTATGAATGACTTGGCTTTAATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAGCGGATAATAGTGACTaGGGCACAGGTCCATGCAGG +
Preference number: 4 (lower is better)
Translates to: AMNDLALMTPKVLDLSSSADNSD*GTGPCR
Trigger: CCTGCATGGACCTGTGCCTCAGTCACTATTATCCGC...TGAACTGGAGAGATCCAGAACCTTGGGAGTCATTAAAGCCAAGTCATTCATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp AAAATCTTCCTGTCCTATTGGTACCAGCACATGAAGCCCTTCTACAAAATTCCTCCTTCCACACGCACCTaGCGGTTAAGTGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: KIFLSYWYQHMKPFYKIPPSTRT*RLSGSQ
Trigger: CTGGGAGCCACTTAACCGTCAGGTGCGTGTGGAAGG...AGGAATTTTGTAGAAGGGCTTCATGTGCTGGTACCAATAGGACAGGAAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR GCA 90 bp ACTTCTAGACACACACACAGACACACATCACTTACTCATAAACGGCACAGCCTAGCCACAGGGTTAATGTaGCTTCCTGCACGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: TSRHTHRHTSLTHKRHSLATGLM*LPARRL
Trigger: AAGCCTGCGTGCAGGAAGGCACATTAACCCTGTGGC...TAGGCTGTGCCGTTTATGAGTAAGTGATGTGTGTCTGTGTGTGTGTCTAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000642017.2
CDS-3UTR CCA 90 bp AGCTCTTTTCCTTTTCGACTCTCGAAGTTAGTGAAGAAGCGGAAGCCATCTTTCGCCACCCCAGGATTTTaGCTTGGGCACCTCTTGATC +
Preference number: 4 (lower is better)
Translates to: SSFPFRLSKLVKKRKPSFATPGF*LGHLLI
Trigger: GATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGC...GAAAGATGGCTTCCGCTTCTTCACTAACTTCGAGAGTCGAAAAGGAAAAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CCA 90 bp ATTTTTCTTTCTCAGATACTCCCGATCAGGGATCACAGAACTCTGGTGGCTGACTTAGAAAGAAGGGCCTaGGTCCCAATCCCACACCCT +
Preference number: 4 (lower is better)
Translates to: IFLSQILPIRDHRTLVADLERRA*VPIPHP
Trigger: AGGGTGTGGGATTGGGACCCAGGCCCTTCTTTCTAA...GTCAGCCACCAGAGTTCTGTGATCCCTGATCGGGAGTATCTGAGAAAGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CCA 90 bp AGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGAATACAAAAATTAGTTaGGTGTGGTGGCGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: RESHRLLPLEGAILINHRNTKIS*VWWRVP
Trigger: AGGCACACGCCACCACACCCAACTAATTTTTGTATT...CCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp GGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTGGCTGATCTTCCTGTCCTATTaGTACCAGCACATGAAGCCC +
Preference number: 4 (lower is better)
Translates to: GNCNSSRQRLLVPIVSWLIFLSY*YQHMKP
Trigger: GGGCTTCATGTGCTGGTACCAATAGGACAGGAAGAT...CAGCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp TCCAGCTCTTTTCCTTTTCGACTCTCGAAGTTAGTGAAGAAGCGGAAGCCATCTCAGGGTCAGATTCAGTaGGTCTGGGGTCTGAATCTC +
Preference number: 4 (lower is better)
Translates to: SSSFPFRLSKLVKKRKPSQGQIQ*VWGLNL
Trigger: GAGATTCAGACCCCAGACCCACTGAATCTGACCCTG...AGATGGCTTCCGCTTCTTCACTAACTTCGAGAGTCGAAAAGGAAAAGAGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CCA 90 bp CCTCCAATAACACAAGGTGAGTGCAGCACTTCTAGACACACACACAGACACACAAACATTTACCCAGCCTaGCTCTTCTCCATAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PPITQGECSTSRHTHRHTNIYPA*LFSIAS
Trigger: GCTGGCTATGGAGAAGAGCCAGGCTGGGTAAATGTT...TGTGTGTCTGTGTGTGTGTCTAGAAGTGCTGCACTCACCTTGTGTTATTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000642017.2
3UTR CAA 72 bp GGACTCAGGGAGGTTTACTCATTTTGGATTCATTCATaGAATGCACGCGAAGTGCCCACTCTGGGTCTGACA +
Preference number: 4 (lower is better)
Translates to: GLREVYSFWIHS*NAREVPTLGLT
Trigger: TGTCAGACCCAGAGTGGGCACTTCGCGTGCATTCAATGAATGAATCCAAAATGAGTAAACCTCCCTGAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR TCA 90 bp GCTATGAATGACTTGGCTTTAATGACTCCCAAGGTTCTGGATCTCTCCAGTTCACCTATGTCAGGACACTaGACAGCCTCCTCAAACCAG +
Preference number: 4 (lower is better)
Translates to: AMNDLALMTPKVLDLSSSPMSGH*TASSNQ
Trigger: CTGGTTTGAGGAGGCTGTTCAGTGTCCTGACATAGG...TGAACTGGAGAGATCCAGAACCTTGGGAGTCATTAAAGCCAAGTCATTCATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp TTAATGTGCCTTCCTGCACGCAGGCTTAAGAGGGATAAACAAGGAGAGGGCTGCATTGGTACCAGCACATaGAGCCCTTCTACAAAATTC +
Preference number: 4 (lower is better)
Translates to: LMCLPARRLKRDKQGEGCIGTST*SPSTKF
Trigger: GAATTTTGTAGAAGGGCTTCATGTGCTGGTACCAAT...GCAGCCCTCTCCTTGTTTATCCCTCTTAAGCCTGCGTGCAGGAAGGCACATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp ATTAGAGTCCAGCTCTTTTCCTTTTCGACTCTCGAAGTTAGTGAAGAAGCGGAATGGTTCAATCATCTCTaGGGGTGGGACCCAGGCATC +
Preference number: 4 (lower is better)
Translates to: IRVQLFSFSTLEVSEEAEWFNHL*GWDPGI
Trigger: GATGCCTGGGTCCCACCCTCAGAGATGATTGAACCA...TTCCGCTTCTTCACTAACTTCGAGAGTCGAAAAGGAAAAGAGCTGGACTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR TCA 90 bp GACACACATCACTTACTCATAAACGGCACAGCCTACGGTACAAGAAAAAGGGCAAAGGATCATAGACTGTaGGGGTGGGAGGTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: DTHHLLINGTAYGTRKRAKDHRL*GWEVLV
Trigger: AACCAAGACCTCCCACCCTCACAGTCTATGATCCTT...TGCCCTTTTTCTTGTACCGTAGGCTGTGCCGTTTATGAGTAAGTGATGTGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000642017.2
CDS-3UTR GCA 90 bp ATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGATAACACAAGGTGAGTaGAGCACTTCTAGACACACA +
Preference number: 4 (lower is better)
Translates to: IQGRRDPGNCNSSRQRLLITQGE*STSRHT
Trigger: TGTGTGTCTAGAAGTGCTGCACTCACCTTGTGTTAT...CAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000642017.2
CDS-3UTR GCA 90 bp TTCCAGTTCCTCATTTTTCTTTCTCAGATACTCCCGATCAGGGATCACAGAACTGGGGAAGGAAGGATTTaGCAGTCGCCCAACCAAGCT +
Preference number: 4 (lower is better)
Translates to: FQFLIFLSQILPIRDHRTGEGRI*QSPNQA
Trigger: AGCTTGGTTGGGCGACTGGCAAATCCTTCCTTCCCC...AGTTCTGTGATCCCTGATCGGGAGTATCTGAGAAAGAAAAATGAGGAACTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR GCA 90 bp GGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCAGGCTGGTTAGAAAGTaGATTCATTCATTTATGGCA +
Preference number: 4 (lower is better)
Translates to: GGWFDLARTPSPEGTGHSRLVRK*IHSFMA
Trigger: TGCCATAAATGAATGAATGCACTTTCTAACCAGCCT...GCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR CCA 90 bp ATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAAGTGACTGAGGTAGCCTaGCCACTCGGCAGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: MTPKVLDLSSSNFKLLTKVTEVA*PLGRSP
Trigger: GGGCGACCTGCCGAGTGGCCAGGCTACCTCAGTCAC...TTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ACTGAGTACAGAGAACTTAGAGGATTAGCTCTGAAGAGTCCTGAAGATAAGGGGGGTCATGCAGGCGGTTaGTTTGACCTTGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: TEYRELRGLALKSPEDKGGHAGG*FDLART
Trigger: AGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACC...CCCCTTATCTTCAGGACTCTTCAGAGCTAATCCTCTAAGTTCTCTGTACTCAGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp TATTGGTACCAGCACATGAAGCCCTTCTACAAAATTCCTGACGGACTGGGAATAGGTCATGCAGGCGGTTaGTTTGACCTTGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: YWYQHMKPFYKIPDGLGIGHAGG*FDLART
Trigger: AGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACC...TATTCCCAGTCCGTCAGGAATTTTGTAGAAGGGCTTCATGTGCTGGTACCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ACTGAGTACAGAGAACTTAGAGGATTAGCTCTGAAGAGTCCTGAAGATAAGGGGTTAGAAAGAAGGGCCTaGGTCCCAATCCCACACCCT +
Preference number: 4 (lower is better)
Translates to: TEYRELRGLALKSPEDKGLERRA*VPIPHP
Trigger: AGGGTGTGGGATTGGGACCCAGGCCCTTCTTTCTAA...CCCCTTATCTTCAGGACTCTTCAGAGCTAATCCTCTAAGTTCTCTGTACTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTGCAGGCAGAGGCTTTTaGTTCCTATTGTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: ILGIAIAAGRGFWFLLFPAGRGF*FLLFPG
Trigger: GCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGC...AGGAAACAATAGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGCAAGGTCAAAATACAAAAATTAGTTaGGTGTGGTGGCGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: HRLLPLEGAILINHRQGQNTKIS*VWWRVP
Trigger: AGGCACACGCCACCACACCCAACTAATTTTTGTATT...TTGACCTTGCCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ACTGAGTACAGAGAACTTAGAGGATTAGCTCTGAAGAGTCCTGAAGATAAGGGGCAGGGTCAGATTCAGTaGGTCTGGGGTCTGAATCTC +
Preference number: 4 (lower is better)
Translates to: TEYRELRGLALKSPEDKGQGQIQ*VWGLNL
Trigger: GAGATTCAGACCCCAGACCCACTGAATCTGACCCTG...CCCCTTATCTTCAGGACTCTTCAGAGCTAATCCTCTAAGTTCTCTGTACTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp TGGGCACCTCTTGATCCTGGTAGAGCTGTTCCAGTTCCTCATTTTTCTTTCTCAAACATTTACCCAGCCTaGCTCTTCTCCATAGCCAGC +
Preference number: 4 (lower is better)
Translates to: WAPLDPGRAVPVPHFSFSNIYPA*LFSIAS
Trigger: GCTGGCTATGGAGAAGAGCCAGGCTGGGTAAATGTT...TGAGAAAGAAAAATGAGGAACTGGAACAGCTCTACCAGGATCAAGAGGTGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR TCA 90 bp GCTATGAATGACTTGGCTTTAATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAGGCACTGGGTTCCTTTaGGTTCGGAACCAATTTCTC +
Preference number: 4 (lower is better)
Translates to: AMNDLALMTPKVLDLSSSGTGFL*VRNQFL
Trigger: GAGAAATTGGTTCCGAACTCAAAGGAACCCAGTGCC...TGAACTGGAGAGATCCAGAACCTTGGGAGTCATTAAAGCCAAGTCATTCATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp ATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGCTTCTACAAAATTCCTaGCGGACTGGGAATAAAAAT +
Preference number: 4 (lower is better)
Translates to: IQGRRDPGNCNSSRQRLLLLQNS*RTGNKN
Trigger: ATTTTTATTCCCAGTCCGTCAGGAATTTTGTAGAAG...CAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp CACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGCAAGGTCAACTTCTACAAAATTCCTaGCGGACTGGGAATAAAAAT +
Preference number: 4 (lower is better)
Translates to: HRLLPLEGAILINHRQGQLLQNS*RTGNKN
Trigger: ATTTTTATTCCCAGTCCGTCAGGAATTTTGTAGAAG...TTGACCTTGCCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp TTAATGTGCCTTCCTGCACGCAGGCTTAAGAGGGATAAACAAGGAGAGGGCTGCCTTCTACAAAATTCCTaGCGGACTGGGAATAAAAAT +
Preference number: 4 (lower is better)
Translates to: LMCLPARRLKRDKQGEGCLLQNS*RTGNKN
Trigger: ATTTTTATTCCCAGTCCGTCAGGAATTTTGTAGAAG...GCAGCCCTCTCCTTGTTTATCCCTCTTAAGCCTGCGTGCAGGAAGGCACATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR GCA 90 bp GGCTTTAATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTCAGGCCCACAGCAGATaGACCCACCGTAAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GFNDSQGSGSLQFKFQIIQAHSR*THRKSS
Trigger: TGAGCTCTTACGGTGGGTGCATCTGCTGTGGGCCTG...AATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGTCATTAAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR CCA 90 bp GCTATGAATGACTTGGCTTTAATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAAGCAAACTGTTTCACTaGGTCAAGGGAGGTCAGATG +
Preference number: 4 (lower is better)
Translates to: AMNDLALMTPKVLDLSSSSKLFH*VKGGQM
Trigger: CATCTGACCTCCCTTGACCCAGTGAAACAGTTTGCT...TGAACTGGAGAGATCCAGAACCTTGGGAGTCATTAAAGCCAAGTCATTCATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000642017.2
CDS-3UTR CCA 90 bp TCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAACAATCAACAGACAGGGCTGCTaGGGCCCTGTCTGTCACCAG +
Preference number: 4 (lower is better)
Translates to: SQGSGSLQFKFQIIDKTINRQGC*GPVCHQ
Trigger: CTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTT...GATTGTTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ACTGAGTACAGAGAACTTAGAGGATTAGCTCTGAAGAGTCCTGAAGATAAGGGGAAACCCTGCAGGCCCTaGGAAAGATTACTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: TEYRELRGLALKSPEDKGKPCRP*ERLLAL
Trigger: AAGAGCTAGTAATCTTTCCCAGGGCCTGCAGGGTTT...CCCCTTATCTTCAGGACTCTTCAGAGCTAATCCTCTAAGTTCTCTGTACTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR TCA 90 bp TCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAACAATCTCCCACACCCTCTCTTaGCACCTAGCCCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SQGSGSLQFKFQIIDKTISHTLS*HLALAP
Trigger: TGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGA...GATTGTTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp AAGGCAGCAATCAGTAGGGGAAGTGCTATAAAAATATACTATCCCGGCCAAGCGTGGGGGAAAAACCAATaGACTAGGAATTATCAGCAG +
Preference number: 4 (lower is better)
Translates to: KAAISRGSAIKIYYPGQAWGKNQ*TRNYQQ
Trigger: CTGCTGATAATTCCTAGTTCATTGGTTTTTCCCCCA...CGCTTGGCCGGGATAGTATATTTTTATAGCACTTCCCCTACTGATTGCTGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR TCA 90 bp TCCAGCTCTTTTCCTTTTCGACTCTCGAAGTTAGTGAAGAAGCGGAAGCCATCTTGGGGGAAAAACCAATaGACTAGGAATTATCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSSFPFRLSKLVKKRKPSWGKNQ*TRNYQQ
Trigger: CTGCTGATAATTCCTAGTTCATTGGTTTTTCCCCCA...AGATGGCTTCCGCTTCTTCACTAACTTCGAGAGTCGAAAAGGAAAAGAGCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CCA 90 bp ATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAAAAGGGGAATCTCCTGTaGGTAGGCCCCGCCGAAAGA +
Preference number: 4 (lower is better)
Translates to: MTPKVLDLSSSNFKLLTKKGNLL*VGPAER
Trigger: TCTTTCGGCGGGGCCTACCCACAGGAGATTCCCCTT...TTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGTCAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp TCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAACAATCTGCAGGCGGTTGGTTTaGCCTTGCCAGAACTCCATC +
Preference number: 4 (lower is better)
Translates to: SQGSGSLQFKFQIIDKTICRRLV*PCQNSI
Trigger: GATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCA...GATTGTTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR TCA 90 bp AAAATCTTCCTGTCCTATTGGTACCAGCACATGAAGCCCTTCTACAAAATTCCTCCTGGCTGCTATGAATaGCTTGGCTTTAATGACTCC +
Preference number: 4 (lower is better)
Translates to: KIFLSYWYQHMKPFYKIPPGCYE*LGFNDS
Trigger: GGAGTCATTAAAGCCAAGTCATTCATAGCAGCCAGG...AGGAATTTTGTAGAAGGGCTTCATGTGCTGGTACCAATAGGACAGGAAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR GCA 90 bp ATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAAGCCACAGGGTTAATGTaGCTTCCTGCACGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: MTPKVLDLSSSNFKLLTKATGLM*LPARRL
Trigger: AAGCCTGCGTGCAGGAAGGCACATTAACCCTGTGGC...TTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAAGCCACCCCAGGATTTTaGCTTGGGCACCTCTTGATC +
Preference number: 4 (lower is better)
Translates to: MTPKVLDLSSSNFKLLTKATPGF*LGHLLI
Trigger: GATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGC...TTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ACTGAGTACAGAGAACTTAGAGGATTAGCTCTGAAGAGTCCTGAAGATAAGGGGAATACAAAAATTAGTTaGGTGTGGTGGCGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: TEYRELRGLALKSPEDKGNTKIS*VWWRVP
Trigger: AGGCACACGCCACCACACCCAACTAATTTTTGTATT...CCCCTTATCTTCAGGACTCTTCAGAGCTAATCCTCTAAGTTCTCTGTACTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
3UTR CAA 72 bp AAAACAGAGCAGCCTCCACTCCTACAGAGCTTACTGTaGAGCAGAGGAGACAAATATCAGTTACATAATCAC +
Preference number: 4 (lower is better)
Translates to: KTEQPPLLQSLL*SRGDKYQLHNH
Trigger: GTGATTATGTAACTGATATTTGTCTCCTCTGCTCAACAGTAAGCTCTGTAGGAGTGGAGGCTGCTCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR CCA 90 bp ATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAACCAGACACATGGCATTaGCTTCCCCTATGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: MTPKVLDLSSSNFKLLTKPDTWH*LPLCQD
Trigger: GTCCTGACATAGGGGAAGCCAATGCCATGTGTCTGG...TTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAACCCAGGATTTTGGCTTaGGCACCTCTTGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: MTPKVLDLSSSNFKLLTKPRILA*APLDPG
Trigger: ACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGG...TTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp CCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAACAATCTCCCAGGATTTTGGCTTaGGCACCTCTTGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: PKVLDLSSSNFKLLTKQSPRILA*APLDPG
Trigger: ACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGG...AGATTGTTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAACAAGCAGGCAGAGGCTTTTaGTTCCTATTGTTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: TPKVLDLSSSNFKLLTKQAGRGF*FLLFPG
Trigger: GCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGC...TTGTTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR GCA 90 bp ATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAAGTCTTGAGAAATGCATaGTTGGCTGGCATGGACTCA +
Preference number: 4 (lower is better)
Translates to: MTPKVLDLSSSNFKLLTKVLRNA*LAGMDS
Trigger: TGAGTCCATGCCAGCCAAGCATGCATTTCTCAAGAC...TTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR CCA 90 bp ATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAAAAAATTAGTTGGGTGTaGTGGCGTGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: MTPKVLDLSSSNFKLLTKKISWV*WRVPVV
Trigger: GACTACAGGCACACGCCACCACACCCAACTAATTTT...TTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGTCAT
40% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CCA 90 bp ACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAACAAAGGAGGTCTCAACCTTaGCTGCACAGAATTATCTGG +
Preference number: 4 (lower is better)
Translates to: TPKVLDLSSSNFKLLTKQRRSQP*LHRIIW
Trigger: CCAGATAATTCTGTGCAGCCAAGGTTGAGACCTCCT...TTGTTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
3UTR CAA 72 bp AAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATaGACAAAACAATCTGATTGGCCAGGTTGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: KVLDLSSSNFKL*TKQSDWPGWLR
Trigger: CCTGAGCCAACCTGGCCAATCAGATTGTTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR GCA 90 bp TCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAACAATCCCCATTACGAAAGGCTaGCTTTTGAACCCATCTTCA +
Preference number: 4 (lower is better)
Translates to: SQGSGSLQFKFQIIDKTIPITKG*LLNPSS
Trigger: TGAAGATGGGTTCAAAAGGCAGCCTTTCGTAATGGG...GATTGTTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000641323.1
CDS-3UTR CCA 90 bp ATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAAATACTGACGGTTAAGTaGCTCCCAGTAGAAGACAAG +
Preference number: 4 (lower is better)
Translates to: MTPKVLDLSSSNFKLLTKILTVK*LPVEDK
Trigger: CTTGTCTTCTACTGGGAGCCACTTAACCGTCAGTAT...TTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225573.5
CDS GCA 90 bp GGCCTGGCCCTAGCGGCGGCACCTCTCGGTCCCCGCGGTAACTCTTaGGCATGGGTCCCAGGTCCATGGCAGCACTGCGACCACACAGGT +
Preference number: 5 (lower is better)
Translates to: GLALAAAPLGPRGNS*AWVPGPWQHCDHTG
Trigger: ACCTGTGTGGTCGCAGTGCTGCCATGGACCTGGGACCCATGCGCAAGAGTTACCGCGGGGACCGAGAGGTGCCGCCGCTAGGGCCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641323.1
CDS CCA 90 bp CAGGTCCATGGCAGCACTGCGACCACACAGGTGACTGAGGTAGCCTaGCCACTCGGCAGGTCGCCCGAACGTCGCCGTGACGCCCCGCAG +
Preference number: 5 (lower is better)
Translates to: QVHGSTATTQVTEVA*PLGRSPERRRDAPQ
Trigger: CTGCGGGGCGTCACGGCGACGTTCGGGCGACCTGCCGAGTGGCCAGGCTACCTCAGTCACCTGTGTGGTCGCAGTGCTGCCATGGACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000585320.5
ENST00000641305.1
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS TCA 90 bp GCCGCCGGCCACGTGACCCGGCTGTGGCCCGGCACTGGGTTCCTTTaGGTTCGGAACCAATTTCTCACCCTGGACTTCTACCCCGGGGAA +
Preference number: 5 (lower is better)
Translates to: AAGHVTRLWPGTGFL*VRNQFLTLDFYPGE
Trigger: TTCCCCGGGGTAGAAGTCCAGGGTGAGAAATTGGTTCCGAACTCAAAGGAACCCAGTGCCGGGCCACAGCCGGGTCACGTGGCCGGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS CCA 90 bp AGCGGAGCTCCACTCACCTCCCGATCAGGGATCACAGAACTCTGGTaGCTGACCACAGCCCCAATCTGGCTGCTCTTGGGGCGGGAGTGG +
Preference number: 5 (lower is better)
Translates to: SGAPLTSRSGITELW*LTTAPIWLLLGREW
Trigger: CCACTCCCGCCCCAAGAGCAGCCAGATTGGGGCTGTGGTCAGCCACCAGAGTTCTGTGATCCCTGATCGGGAGGTGAGTGGAGCTCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641305.1
CDS GCA 90 bp GCGAGCAGAGGGTTTTCCATCTCTCTCGGTCCCCGCGGTAACTCTTaGGCATGGGTCCCAGGTCCATGGCAGCACTGCGACCACACAGGT +
Preference number: 5 (lower is better)
Translates to: ASRGFSISLGPRGNS*AWVPGPWQHCDHTG
Trigger: ACCTGTGTGGTCGCAGTGCTGCCATGGACCTGGGACCCATGCGCAAGAGTTACCGCGGGGACCGAGAGAGATGGAAAACCCTCTGCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641856.1
CDS CCA 90 bp TACAGCGGAGCTCCACTCACCTCCCGATCAGGGATCACAGAACTCTaGTGGCTGACCACAGCCCCAATCTGGCTGCTCTTGGGGCGGGAG +
Preference number: 5 (lower is better)
Translates to: YSGAPLTSRSGITEL*WLTTAPIWLLLGRE
Trigger: CTCCCGCCCCAAGAGCAGCCAGATTGGGGCTGTGGTCAGCCACCAGAGTTCTGTGATCCCTGATCGGGAGGTGAGTGGAGCTCCGCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641305.1
CDS TCA 90 bp CTTCACAGGGCCTTCCACACGCACCTGCTCAGGGATGGCTCTGGGTaGATGGCATTAAATGCCACCTGCCCTCCCTACCAGCACAGGCCC +
Preference number: 5 (lower is better)
Translates to: LHRAFHTHLLRDGSG*MALNATCPPYQHRP
Trigger: GGGCCTGTGCTGGTAGGGAGGGCAGGTGGCATTTAATGCCATTCACCCAGAGCCATCCCTGAGCAGGTGCGTGTGGAAGGCCCTGTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641305.1
CDS-3UTR CAA 90 bp CACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGTCCCAGAGATCCCACACCCTCTCTaGACACCTAGCCCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: HPLLTPSPSSTLGQQVPEIPHPL*TPSPSS
Trigger: GGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGAT...CTCTGGGACCTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS GCA 90 bp TCAGATGAGTCTCCTCAAATGCCTCTCGGTCCCCGCGGTAACTCTTaGGCATGGGTCCCAGGTCCATGGCAGCACTGCGACCACACAGGT +
Preference number: 5 (lower is better)
Translates to: SDESPQMPLGPRGNS*AWVPGPWQHCDHTG
Trigger: ACCTGTGTGGTCGCAGTGCTGCCATGGACCTGGGACCCATGCGCAAGAGTTACCGCGGGGACCGAGAGGCATTTGAGGAGACTCATCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000583245.6
ENST00000584061.6
ENST00000641305.1
ENST00000642017.2
CDS GCA 90 bp AACCAGGCAGCAAACTGTTTCACTCTCGGTCCCCGCGGTAACTCTTaGGCATGGGTCCCAGGTCCATGGCAGCACTGCGACCACACAGGT +
Preference number: 5 (lower is better)
Translates to: NQAANCFTLGPRGNS*AWVPGPWQHCDHTG
Trigger: ACCTGTGTGGTCGCAGTGCTGCCATGGACCTGGGACCCATGCGCAAGAGTTACCGCGGGGACCGAGAGTGAAACAGTTTGCTGCCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641709.1
CDS GCA 90 bp CCACACGCACCTGCTCAGGGATGGCTCTGGGTGAATGGCATTAAATaGCACCTGCCCTCCCTACCAGCACAGGCCCCGTTCCTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: PHAPAQGWLWVNGIK*HLPSLPAQAPFLSV
Trigger: AACAGAGAGGAACGGGGCCTGTGCTGGTAGGGAGGGCAGGTGGCATTTAATGCCATTCACCCAGAGCCATCCCTGAGCAGGTGCGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641305.1
CDS CCA 90 bp CAGACTGGCCTCTGTCCTCCAGGAGCAGTCAACAGGATGGCCAGATaGACAGAGGAGGCCTATTTCCCCTCTCCCTACCCCCACTTTCCC +
Preference number: 5 (lower is better)
Translates to: QTGLCPPGAVNRMAR*TEEAYFPSPYPHFP
Trigger: GGGAAAGTGGGGGTAGGGAGAGGGGAAATAGGCCTCCTCTGTCCATCTGGCCATCCTGTTGACTGCTCCTGGAGGACAGAGGCCAGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641305.1
CDS-3UTR CAA 90 bp CCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGTCCCAGCGGTTGGTTTGACCTaGCCAGAACTCCATCACCTG +
Preference number: 5 (lower is better)
Translates to: PHPLLTPSPSSTLGQQVPAVGLT*PELHHL
Trigger: CAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGC...TGGGACCTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS GCA 90 bp CCCAGTCTGGGGACCTTCGCTAGACGTAGCCATAAACTCAGGCCCTaGCAACCCAGCCCATCCCAGGCTGTCCTGGGAAAATTCACTCAC +
Preference number: 5 (lower is better)
Translates to: PSLGTFARRSHKLRP*QPSPSQAVLGKFTH
Trigger: GTGAGTGAATTTTCCCAGGACAGCCTGGGATGGGCTGGGTTGGCAGGGCCTGAGTTTATGGCTACGTCTAGCGAAGGTCCCCAGACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641305.1
CDS CCA 90 bp GGCCCGGCACTGGGTTCCTTTGAGTTCGGAACCAATTTCTCACCCTaGACTTCTACCCCGGGGAAGGAAGGATTTGCCAGTCGCCCAACC +
Preference number: 5 (lower is better)
Translates to: GPALGSFEFGTNFSP*TSTPGKEGFASRPT
Trigger: GGTTGGGCGACTGGCAAATCCTTCCTTCCCCGGGGTAGAAGTCCAGGGTGAGAAATTGGTTCCGAACTCAAAGGAACCCAGTGCCGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS CCA 90 bp ACTTCCTGGGGATATGTGCTGGGGACATGGGTGAGCAGAGCAGACTaGCCTCTGTCCTCCAGGAGCAGTCAACAGGATGGCCAGATGGAC +
Preference number: 5 (lower is better)
Translates to: TSWGYVLGTWVSRAD*PLSSRSSQQDGQMD
Trigger: GTCCATCTGGCCATCCTGTTGACTGCTCCTGGAGGACAGAGGCCAGTCTGCTCTGCTCACCCATGTCCCCAGCACATATCCCCAGGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641305.1
CDS-3UTR CAA 90 bp TGGGTCCCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCGCCAGACACATGGCATaGGCTTCCCCTATGTCAGGA +
Preference number: 5 (lower is better)
Translates to: WVPIPHPLLTPSPSSTLGARHMA*ASPMSG
Trigger: TCCTGACATAGGGGAAGCCAATGCCATGTGTCTGGC...GCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGGGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CAA 90 bp CCCTGTCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTTGGCTTGGGCACCTCTaGATCCTGGTAGAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: PCLSPERESHRLLPLEGAWLGHL*ILVELF
Trigger: GAACAGCTCTACCAGGATCAAGAGGTGCCCAAGCCA...AGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp CCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGAGCCACCCCAGGATTTaGGCTTGGGCACCTCTTGAT +
Preference number: 5 (lower is better)
Translates to: PIPHPLLTPSPSSTLGQQSHPRI*AWAPLD
Trigger: ATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGCT...CTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp CCCAAAGGGGAATCTCCTGTGGGTAGGCCCCGCCGAAAGACTATCCGGTCATGCGCGGTTGGTTTGACCTaGCCAGAACTCCATCACCTG +
Preference number: 5 (lower is better)
Translates to: PKGESPVGRPRRKTIRSCAVGLT*PELHHL
Trigger: CAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGC...GCATGACCGGATAGTCTTTCGGCGGGGCCTACCCACAGGAGATTCCCCTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp GGGAATCTCCTGTGGGTAGGCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTATGCAGGCGGTTGGTTaGACCTTGCCAGAACTCCAT +
Preference number: 5 (lower is better)
Translates to: GNLLWVGPAERLSGHAGGMQAVG*TLPELH
Trigger: ATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCAT...ACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGCCTACCCACAGGAGATTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS CCA 90 bp GTTTCTTCACAGGGCCTTCCACACGCACCTGCTCAGGGATGGCTCTaGGTGAATGGCATTAAATGCCACCTGCCCTCCCTACCAGCACAG +
Preference number: 5 (lower is better)
Translates to: VSSQGLPHAPAQGWL*VNGIKCHLPSLPAQ
Trigger: CTGTGCTGGTAGGGAGGGCAGGTGGCATTTAATGCCATTCACCCAGAGCCATCCCTGAGCAGGTGCGTGTGGAAGGCCCTGTGAAGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641305.1
CDS-3UTR CAA 90 bp TGGGGCGGGAGTGGAAGTAGCACTCAGCCTCCTCCTCAGGCAGTTTCTTCACAGTGGCTTGGGCACCTCTaGATCCTGGTAGAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: WGGSGSSTQPPPQAVSSQWLGHL*ILVELF
Trigger: GAACAGCTCTACCAGGATCAAGAGGTGCCCAAGCCA...CTGTGAAGAAACTGCCTGAGGAGGAGGCTGAGTGCTACTTCCACTCCCGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp TCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTATCCCACACCCTCTCTaGACACCTAGCCCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: SVTRKGVTPAATPRGSYPIPHPL*TPSPSS
Trigger: GGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGAT...AGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp GGAGTGGAAGTAGCACTCAGCCTCCTCCTCAGGCAGTTTCTTCACAGGGCCTTCATCCCACACCCTCTCTaGACACCTAGCCCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: GVEVALSLLLRQFLHRAFIPHPL*TPSPSS
Trigger: GGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGAT...GAAGGCCCTGTGAAGAAACTGCCTGAGGAGGAGGCTGAGTGCTACTTCCACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp GGGAATCTCCTGTGGGTAGGCCCCGCCGAAAGACTATCCGGTCATGCAGGCGGTAGCAGGCAGAGGCTTTaGGTTCCTATTGTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: GNLLWVGPAERLSGHAGGSRQRL*VPIVSW
Trigger: CCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCT...ACCGCCTGCATGACCGGATAGTCTTTCGGCGGGGCCTACCCACAGGAGATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS CCA 90 bp GGCTATTTTAGAGGCAGAGTGCCCAGCTGGGATGTTTGCCCAGTCTaGGGACCTTCGCTAGACGTAGCCATAAACTCAGGCCCTGCCAAC +
Preference number: 5 (lower is better)
Translates to: GYFRGRVPSWDVCPV*GPSLDVAINSGPAN
Trigger: GTTGGCAGGGCCTGAGTTTATGGCTACGTCTAGCGAAGGTCCCCAGACTGGGCAAACATCCCAGCTGGGCACTCTGCCTCTAAAATAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641305.1
CDS-3UTR CAA 90 bp CCCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTTGGCTTGGGCACCTCTaGATCCTGGTAGAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: PAERLSGHAGGWFDLARTWLGHL*ILVELF
Trigger: GAACAGCTCTACCAGGATCAAGAGGTGCCCAAGCCA...AGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp CACGCAGGCTTAAGAGGGATAAACAAGGAGAGGGCTGCCCTTGGAGAAGGCCTGTGGCTTGGGCACCTCTaGATCCTGGTAGAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: HAGLRGINKERAALGEGLWLGHL*ILVELF
Trigger: GAACAGCTCTACCAGGATCAAGAGGTGCCCAAGCCA...CAGGCCTTCTCCAAGGGCAGCCCTCTCCTTGTTTATCCCTCTTAAGCCTGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CAA 90 bp TCTGTCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAGCCACCCCAGGATTTaGGCTTGGGCACCTCTTGAT +
Preference number: 5 (lower is better)
Translates to: SVTRKGVTPAATPRGSYPSHPRI*AWAPLD
Trigger: ATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGCT...AGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp GTGGAAGTAGCACTCAGCCTCCTCCTCAGGCAGTTTCTTCACAGGGCCTTCCACAGCCACCCCAGGATTTaGGCTTGGGCACCTCTTGAT +
Preference number: 5 (lower is better)
Translates to: VEVALSLLLRQFLHRAFHSHPRI*AWAPLD
Trigger: ATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGCT...GTGGAAGGCCCTGTGAAGAAACTGCCTGAGGAGGAGGCTGAGTGCTACTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp ATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATCCCACACCCTCTCTaGACACCTAGCCCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: MQAVGLTLPELHHLRVQDIPHPL*TPSPSS
Trigger: GGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGAT...GTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp TGGGTCCCAATCCCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCAGGGAGGGAAATGGGTaGAGTTTAGAAAGAAGGGCC +
Preference number: 5 (lower is better)
Translates to: WVPIPHPLLTPSPSSTLGREGNG*SLERRA
Trigger: GGCCCTTCTTTCTAAACTCAACCCATTTCCCTCCCT...GCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGATTGGGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp TCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCGCCAGACACATGGCATaGGCTTCCCCTATGTCAGGA +
Preference number: 5 (lower is better)
Translates to: SPERESHRLLPLEGAILIARHMA*ASPMSG
Trigger: TCCTGACATAGGGGAAGCCAATGCCATGTGTCTGGC...GATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CAA 90 bp TTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGAGCCAGACACATGGCATaGGCTTCCCCTATGTCAGGA +
Preference number: 5 (lower is better)
Translates to: LTLPELHHLRVQDIATPGARHMA*ASPMSG
Trigger: TCCTGACATAGGGGAAGCCAATGCCATGTGTCTGGC...TCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CAA 90 bp TCACCAGAAAGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAGCCACCCCAGGATTTaGGCTTGGGCACCTCTTGAT +
Preference number: 5 (lower is better)
Translates to: SPERESHRLLPLEGAILISHPRI*AWAPLD
Trigger: ATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGCT...GATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCTTTCTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp GACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTAGCCACCCCAGGATTTaGGCTTGGGCACCTCTTGAT +
Preference number: 5 (lower is better)
Translates to: DLARTPSPEGTGHSHPRISHPRI*AWAPLD
Trigger: ATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGCT...AATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp GGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCAGCCACCCCAGGATTTaGGCTTGGGCACCTCTTGAT +
Preference number: 5 (lower is better)
Translates to: GGWFDLARTPSPEGTGHSSHPRI*AWAPLD
Trigger: ATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGCT...GCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp AGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAGCGGTTGGTTTGACCTaGCCAGAACTCCATCACCTG +
Preference number: 5 (lower is better)
Translates to: SMTHMVTDRAAGALSVTRAVGLT*PELHHL
Trigger: CAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGC...TCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp ACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTTGGGCAGCGGTTGGTTTGACCTaGCCAGAACTCCATCACCTG +
Preference number: 5 (lower is better)
Translates to: TPSPEGTGHSHPRILAWAAVGLT*PELHHL
Trigger: CAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGC...TGCCCAAGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp CCACACCCTCTCTTGACACCTAGCCCTAGCTCCACTCTGGGCCAGCAGGTCCCAGCTGCTATGAATGACTaGGCTTTAATGACTCCCAAG +
Preference number: 5 (lower is better)
Translates to: PHPLLTPSPSSTLGQQVPAAMND*ALMTPK
Trigger: CTTGGGAGTCATTAAAGCCAAGTCATTCATAGCAGC...TGGGACCTGCTGGCCCAGAGTGGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp GACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTGCTGATGCTCCTGGCTaGTGGACCACCCTGTGTATA +
Preference number: 5 (lower is better)
Translates to: DLARTPSPEGTGHSHPRIADAPG*WTTLCI
Trigger: TATACACAGGGTGGTCCACAAGCCAGGAGCATCAGC...AATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CAA 90 bp CTTGGAGAAGGCCTGCGGATAATAGTGACTGAGGCACAGGTCCATGCAGGGGAAGCTGATGCTCCTGGCTaGTGGACCACCCTGTGTATA +
Preference number: 5 (lower is better)
Translates to: LGEGLRIIVTEAQVHAGEADAPG*WTTLCI
Trigger: TATACACAGGGTGGTCCACAAGCCAGGAGCATCAGC...TTCCCCTGCATGGACCTGTGCCTCAGTCACTATTATCCGCAGGCCTTCTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS GCA 90 bp CTAACTGAGGGCTATTTTAGAGGCAGAGTGCCCAGCTGGGATGTTTaGCCAGTCTGGGGACCTTCGCTAGACGTAGCCATAAACTCAGGC +
Preference number: 5 (lower is better)
Translates to: LTEGYFRGRVPSWDV*PVWGPSLDVAINSG
Trigger: GCCTGAGTTTATGGCTACGTCTAGCGAAGGTCCCCAGACTGGGCAAACATCCCAGCTGGGCACTCTGCCTCTAAAATAGCCCTCAGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641305.1
CDS CCA 90 bp GAAGAAGGGCCAGGCCCAGTCAATGATTCATTAACAAGGACTTCCTaGGGATATGTGCTGGGGACATGGGTGAGCAGAGCAGACTGGCCT +
Preference number: 5 (lower is better)
Translates to: EEGPGPVNDSLTRTS*GYVLGTWVSRADWP
Trigger: AGGCCAGTCTGCTCTGCTCACCCATGTCCCCAGCACATATCCCCAGGAAGTCCTTGTTAATGAATCATTGACTGGGCCTGGCCCTTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641305.1
CDS-3UTR CAA 90 bp TTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGTGGGTCATGGGCGGCACTGGGTTCCTTaGAGTTCGGAACCAATTTCT +
Preference number: 5 (lower is better)
Translates to: LRCKSLIEPVFLPAVGHGRHWVP*SSEPIS
Trigger: AGAAATTGGTTCCGAACTCAAAGGAACCCAGTGCCG...CCCATGACCCACCGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp TATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAAATGGCTTGGGCACCTCTaGATCCTGGTAGAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: YDSHGNRQGCWGPVCHQKWLGHL*ILVELF
Trigger: GAACAGCTCTACCAGGATCAAGAGGTGCCCAAGCCA...TTTCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp CTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGTGGCTTGGGCACCTCTaGATCCTGGTAGAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: LARTPSPEGTGHSHPRILWLGHL*ILVELF
Trigger: GAACAGCTCTACCAGGATCAAGAGGTGCCCAAGCCA...CAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp AGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGAGCCACCCCAGGATTTaGGCTTGGGCACCTCTTGAT +
Preference number: 5 (lower is better)
Translates to: RESHRLLPLEGAILINHRSHPRI*AWAPLD
Trigger: ATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGCT...CCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp AGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGGCGGTTGGTTTGACCTaGCCAGAACTCCATCACCTG +
Preference number: 5 (lower is better)
Translates to: RESHRLLPLEGAILINHRAVGLT*PELHHL
Trigger: CAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGC...CCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp CATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGAATGCAGGCGGTTGGTTaGACCTTGCCAGAACTCCAT +
Preference number: 5 (lower is better)
Translates to: HAGGWFDLARTPSPEGTGMQAVG*TLPELH
Trigger: ATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCAT...TCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp AGAGTTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGTGGGTCAATGCAGGCGGTTGGTTaGACCTTGCCAGAACTCCAT +
Preference number: 5 (lower is better)
Translates to: RVKVQVSHRASLPPRGGSMQAVG*TLPELH
Trigger: ATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCAT...TGACCCACCGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp GCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCATGCAGGCGGTTGGTTaGACCTTGCCAGAACTCCAT +
Preference number: 5 (lower is better)
Translates to: AVGLTLPELHHLRVQDIAMQAVG*TLPELH
Trigger: ATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCAT...GGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp GAGGAAGCAAGAGCCAAACCCTGCAGGCCCTGGGAAAGATTACTAGCTCTTTTCATCCCACACCCTCTCTaGACACCTAGCCCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: EEARAKPCRPWERLLALFIPHPL*TPSPSS
Trigger: GGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGAT...GAAAAGAGCTAGTAATCTTTCCCAGGGCCTGCAGGGTTTGGCTCTTGCTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR CAA 90 bp CCCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTAGGGAGGGAAATGGGTaGAGTTTAGAAAGAAGGGCC +
Preference number: 5 (lower is better)
Translates to: PAERLSGHAGGWFDLARTREGNG*SLERRA
Trigger: GGCCCTTCTTTCTAAACTCAACCCATTTCCCTCCCT...AGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp GTCCCAGAGTTAAGGTGCAAGTCTCTCATAGAGCCAGTCTTCCTCCCCGCGGTGAGGGAGGGAAATGGGTaGAGTTTAGAAAGAAGGGCC +
Preference number: 5 (lower is better)
Translates to: VPELRCKSLIEPVFLPAVREGNG*SLERRA
Trigger: GGCCCTTCTTTCTAAACTCAACCCATTTCCCTCCCT...CACCGCGGGGAGGAAGACTGGCTCTATGAGAGACTTGCACCTTAACTCTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp ACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTTGGGCACGGCACTGGGTTCCTTaGAGTTCGGAACCAATTTCT +
Preference number: 5 (lower is better)
Translates to: TPSPEGTGHSHPRILAWARHWVP*SSEPIS
Trigger: AGAAATTGGTTCCGAACTCAAAGGAACCCAGTGCCG...TGCCCAAGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp CTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGCGGCACTGGGTTCCTTaGAGTTCGGAACCAATTTCT +
Preference number: 5 (lower is better)
Translates to: LSGHAGGWFDLARTPSPERHWVP*SSEPIS
Trigger: AGAAATTGGTTCCGAACTCAAAGGAACCCAGTGCCG...CTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp GGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTTGGCTTGGGCACCTCTaGATCCTGGTAGAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: GRRDPGNCNSSRQRLLVPWLGHL*ILVELF
Trigger: GAACAGCTCTACCAGGATCAAGAGGTGCCCAAGCCA...AGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp CACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGCAAGGTCAAGCGGTTGGTTTGACCTaGCCAGAACTCCATCACCTG +
Preference number: 5 (lower is better)
Translates to: HRLLPLEGAILINHRQGQAVGLT*PELHHL
Trigger: CAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGC...TTGACCTTGCCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp GACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGAGGGAAATGGGTaGAGTTTAGAAAGAAGGGCC +
Preference number: 5 (lower is better)
Translates to: DYPVMQAVGLTLPELHHLREGNG*SLERRA
Trigger: GGCCCTTCTTTCTAAACTCAACCCATTTCCCTCCCT...CAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp TTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGAAGCAGGCAGAGGCTTTaGGTTCCTATTGTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: LTLPELHHLRVQDIATPGSRQRL*VPIVSW
Trigger: CCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCT...TCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp CTTGGAGAAGGCCTGCGGATAATAGTGACTGAGGCACAGGTCCATGCAGGGGAAAGCAGGCAGAGGCTTTaGGTTCCTATTGTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: LGEGLRIIVTEAQVHAGESRQRL*VPIVSW
Trigger: CCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCT...TTCCCCTGCATGGACCTGTGCCTCAGTCACTATTATCCGCAGGCCTTCTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CAA 90 bp AGGGAGTCACACCGGCTGCTACCCCTAGAGGGAGCTATCCTAATCAATCATAGGCGGCACTGGGTTCCTTaGAGTTCGGAACCAATTTCT +
Preference number: 5 (lower is better)
Translates to: RESHRLLPLEGAILINHRRHWVP*SSEPIS
Trigger: AGAAATTGGTTCCGAACTCAAAGGAACCCAGTGCCG...CCTATGATTGATTAGGATAGCTCCCTCTAGGGGTAGCAGCCGGTGTGACTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp GGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATGCAGGCGGTTGGTTaGACCTTGCCAGAACTCCAT +
Preference number: 5 (lower is better)
Translates to: GRRDPGNCNSSRQRLLVPMQAVG*TLPELH
Trigger: ATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCAT...AGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp ACCAGGCAGCAAACTGTTTCACTGGGTCAAGGGAGGTCAGATGAGTCTCCTCAAATGCAGGCGGTTGGTTaGACCTTGCCAGAACTCCAT +
Preference number: 5 (lower is better)
Translates to: TRQQTVSLGQGRSDESPQMQAVG*TLPELH
Trigger: ATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCAT...TTGAGGAGACTCATCTGACCTCCCTTGACCCAGTGAAACAGTTTGCTGCCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641323.1
CDS-3UTR CAA 90 bp CCGCCGAAAGACTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCGCTGCTATGAATGACTaGGCTTTAATGACTCCCAAG +
Preference number: 5 (lower is better)
Translates to: PPKDYPVMQAVGLTLPELAAMND*ALMTPK
Trigger: CTTGGGAGTCATTAAAGCCAAGTCATTCATAGCAGC...GAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAGTCTTTCGGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp GTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGAATCTTCCTGTCCTATaGGTACCAGCACATGAAGCC +
Preference number: 5 (lower is better)
Translates to: VMQAVGLTLPELHHLRVQNLPVL*VPAHEA
Trigger: GGCTTCATGTGCTGGTACCAATAGGACAGGAAGATT...CTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CAA 90 bp GCTCTTCTCCATAGCCAGCAGGTTGCTTGCTCATCCAGTCTGTCCCTGGTTAGCAATCTTCCTGTCCTATaGGTACCAGCACATGAAGCC +
Preference number: 5 (lower is better)
Translates to: ALLHSQQVACSSSLSLVSNLPVL*VPAHEA
Trigger: GGCTTCATGTGCTGGTACCAATAGGACAGGAAGATT...GCTAACCAGGGACAGACTGGATGAGCAAGCAACCTGCTGGCTATGGAGAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CAA 90 bp CTATCCGGTCATGCAGGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGACGAAAGGCTGCCTTTaGAACCCATCTTCATTTGCG +
Preference number: 5 (lower is better)
Translates to: LSGHAGGWFDLARTPSPETKGCL*NPSSFA
Trigger: CGCAAATGAAGATGGGTTCAAAAGGCAGCCTTTCGT...CTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCATGACCGGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641323.1
CDS CCA 90 bp CCATCCCAGGCTGTCCTGGGAAAATTCACTCACCTGACGGTTAAGTaGCTCCCAGTAGAAGACAAGGGAAGCAAAGGGATTAGAGTCCTA +
Preference number: 5 (lower is better)
Translates to: PSQAVLGKFTHLTVK*LPVEDKGSKGIRVL
Trigger: TAGGACTCTAATCCCTTTGCTTCCCTTGTCTTCTACTGGGAGCCACTTAACCGTCAGGTGAGTGAATTTTCCCAGGACAGCCTGGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641305.1
CDS-3UTR CAA 90 bp ATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGCGGCACTGGGTTCCTTaGAGTTCGGAACCAATTTCT +
Preference number: 5 (lower is better)
Translates to: IQGRRDPGNCNSSRQRLLRHWVP*SSEPIS
Trigger: AGAAATTGGTTCCGAACTCAAAGGAACCCAGTGCCG...CAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp GATTCTCTACGCCACCATTACACTCCACTTGACCAGCTAACTGAGAACCAACTGGCCAGACACATGGCATaGGCTTCCCCTATGTCAGGA +
Preference number: 5 (lower is better)
Translates to: DSLRHHYTPLDQLTENQLARHMA*ASPMSG
Trigger: TCCTGACATAGGGGAAGCCAATGCCATGTGTCTGGC...CAGTTGGTTCTCAGTTAGCTGGTCAAGTGGAGTGTAATGGTGGCGTAGAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CAA 90 bp GGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTGGCTGATGCAGGCGGTTGGTTaGACCTTGCCAGAACTCCAT +
Preference number: 5 (lower is better)
Translates to: GNCNSSRQRLLVPIVSWLMQAVG*TLPELH
Trigger: ATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCAT...CAGCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp ATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGAGGGAGGGAAATGGGTaGAGTTTAGAAAGAAGGGCC +
Preference number: 5 (lower is better)
Translates to: IQGRRDPGNCNSSRQRLLREGNG*SLERRA
Trigger: GGCCCTTCTTTCTAAACTCAACCCATTTCCCTCCCT...CAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp GGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTAGGGAGGGAAATGGGTaGAGTTTAGAAAGAAGGGCC +
Preference number: 5 (lower is better)
Translates to: GRRDPGNCNSSRQRLLVPREGNG*SLERRA
Trigger: GGCCCTTCTTTCTAAACTCAACCCATTTCCCTCCCT...AGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp GACATAGCCACCCCAGGATTTTGGCTTGGGCACCTCTTGATCCTGGTAGAGCTGGCTGCTATGAATGACTaGGCTTTAATGACTCCCAAG +
Preference number: 5 (lower is better)
Translates to: DIATPGFWLGHLLILVELAAMND*ALMTPK
Trigger: CTTGGGAGTCATTAAAGCCAAGTCATTCATAGCAGC...CAGCTCTACCAGGATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGCTATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp ATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAAAGGCTGCTATGAATGACTaGGCTTTAATGACTCCCAAG +
Preference number: 5 (lower is better)
Translates to: MTHMVTDRAAGALSVTRKAAMND*ALMTPK
Trigger: CTTGGGAGTCATTAAAGCCAAGTCATTCATAGCAGC...CTTTCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp GCAGGGTCAGATTCAGTGGGTCTGGGGTCTGAATCTCTAAGGCGCTGCCAAGTGGGCAGGTGTGATTGTTaGAAATCTCTCCCAATATTG +
Preference number: 5 (lower is better)
Translates to: AGSDSVGLGSESLRRCQVGRCDC*KSLPIL
Trigger: CAATATTGGGAGAGATTTCAAACAATCACACCTGCC...CACTTGGCAGCGCCTTAGAGATTCAGACCCCAGACCCACTGAATCTGACCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CAA 90 bp AGCTTTGGCCAGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCGGCAGGTGTGATTGTTaGAAATCTCTCCCAATATTG +
Preference number: 5 (lower is better)
Translates to: SFGQYDSHGNRQGCWGPVGRCDC*KSLPIL
Trigger: CAATATTGGGAGAGATTTCAAACAATCACACCTGCC...GACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACTGGCCAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CAA 90 bp GGCGGTTGGTTTGACCTTGCCAGAACTCCATCACCTGAGGGTACAGGACATAGCTTTTGGATTCATTCATaGAATGCACGCGAAGTGCCC +
Preference number: 5 (lower is better)
Translates to: GGWFDLARTPSPEGTGHSFWIHS*NAREVP
Trigger: GGGCACTTCGCGTGCATTCAATGAATGAATCCAAAA...GCTATGTCCTGTACCCTCAGGTGATGGAGTTCTGGCAAGGTCAAACCAACCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR CAA 90 bp AGTATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGATCAAAAGTAGGCCTATaGTCACAGACACAGAGACAG +
Preference number: 5 (lower is better)
Translates to: SMTHMVTDRAAGALSVTRSKVGL*SQTQRQ
Trigger: CTGTCTCTGTGTCTGTGACAATAGGCCTACTTTTGA...TCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR CAA 90 bp GAACAGGTCATGGCTGATGGGGTGAGGCTGGTTAGAAAGTGCATTCATTCATTTAGCCACCCCAGGATTTaGGCTTGGGCACCTCTTGAT +
Preference number: 5 (lower is better)
Translates to: EQVMADGVRLVRKCIHSFSHPRI*AWAPLD
Trigger: ATCAAGAGGTGCCCAAGCCAAAATCCTGGGGTGGCT...AAATGAATGAATGCACTTTCTAACCAGCCTCACCCCATCAGCCATGACCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS-3UTR CAA 90 bp GCTATGAATGACTTGGCTTTAATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAATCCCACACCCTCTCTaGACACCTAGCCCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: AMNDLALMTPKVLDLSSSIPHPL*TPSPSS
Trigger: GGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGAT...TGAACTGGAGAGATCCAGAACCTTGGGAGTCATTAAAGCCAAGTCATTCATAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp AGAACTCCATCACCTGAGGGTACAGGACATAGCCACCCCAGGATTTTGGCTTGGGCTGCTATGAATGACTaGGCTTTAATGACTCCCAAG +
Preference number: 5 (lower is better)
Translates to: RTPSPEGTGHSHPRILAWAAMND*ALMTPK
Trigger: CTTGGGAGTCATTAAAGCCAAGTCATTCATAGCAGC...CCAAGCCAAAATCCTGGGGTGGCTATGTCCTGTACCCTCAGGTGATGGAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp TATGACTCACATGGTAACAGACAGGGCTGCTGGGGCCCTGTCTGTCACCAGAAAGCTGCTATGAATGACTaGGCTTTAATGACTCCCAAG +
Preference number: 5 (lower is better)
Translates to: YDSHGNRQGCWGPVCHQKAAMND*ALMTPK
Trigger: CTTGGGAGTCATTAAAGCCAAGTCATTCATAGCAGC...TTTCTGGTGACAGACAGGGCCCCAGCAGCCCTGTCTGTTACCATGTGAGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp GGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTGGCTGAGCAGGCAGAGGCTTTaGGTTCCTATTGTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: GNCNSSRQRLLVPIVSWLSRQRL*VPIVSW
Trigger: CCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCT...CAGCCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp ATCCAGGGAAGGAGAGATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGAATCTTCCTGTCCTATaGGTACCAGCACATGAAGCC +
Preference number: 5 (lower is better)
Translates to: IQGRRDPGNCNSSRQRLLNLPVL*VPAHEA
Trigger: GGCTTCATGTGCTGGTACCAATAGGACAGGAAGATT...CAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGATCTCTCCTTCCCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS TCA 90 bp TCAAACCAGGCAGCAAACTGTTTCACTGGGTCAAGGGAGGTCAGATaGGTCTCCTCAAATGCTATCACTTCCCAGATGAGGAAACTGAGG +
Preference number: 5 (lower is better)
Translates to: SNQAANCFTGSREVR*VSSNAITSQMRKLR
Trigger: CCTCAGTTTCCTCATCTGGGAAGTGATAGCATTTGAGGAGACTCATCTGACCTCCCTTGACCCAGTGAAACAGTTTGCTGCCTGGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641427.1
CDS-3UTR CAA 90 bp TTCCAGTTCCTCATTTTTCTTTCTCAGATACTCCCGATCAGGGATCACAGAACTTGGCTTGGGCACCTCTaGATCCTGGTAGAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: FQFLIFLSQILPIRDHRTWLGHL*ILVELF
Trigger: GAACAGCTCTACCAGGATCAAGAGGTGCCCAAGCCA...AGTTCTGTGATCCCTGATCGGGAGTATCTGAGAAAGAAAAATGAGGAACTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp AGCTCTTTTCCTTTTCGACTCTCGAAGTTAGTGAAGAAGCGGAAGCCATCTTTCATGCAGGCGGTTGGTTaGACCTTGCCAGAACTCCAT +
Preference number: 5 (lower is better)
Translates to: SSFPFRLSKLVKKRKPSFMQAVG*TLPELH
Trigger: ATGGAGTTCTGGCAAGGTCAAACCAACCGCCTGCAT...GAAAGATGGCTTCCGCTTCTTCACTAACTTCGAGAGTCGAAAAGGAAAAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CAA 90 bp ATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTAGCAGGCAGAGGCTTTaGGTTCCTATTGTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: ILGIAIAAGRGFWFLLFPSRQRL*VPIVSW
Trigger: CCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCT...AGGAAACAATAGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp ATTAGAGTCCAGCTCTTTTCCTTTTCGACTCTCGAAGTTAGTGAAGAAGCGGAAGCTGATGCTCCTGGCTaGTGGACCACCCTGTGTATA +
Preference number: 5 (lower is better)
Translates to: IRVQLFSFSTLEVSEEAEADAPG*WTTLCI
Trigger: TATACACAGGGTGGTCCACAAGCCAGGAGCATCAGC...TTCCGCTTCTTCACTAACTTCGAGAGTCGAAAAGGAAAAGAGCTGGACTCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000641323.1
ENST00000641709.1
CDS-3UTR CAA 90 bp ACTGAGTACAGAGAACTTAGAGGATTAGCTCTGAAGAGTCCTGAAGATAAGGGGAGGGAGGGAAATGGGTaGAGTTTAGAAAGAAGGGCC +
Preference number: 5 (lower is better)
Translates to: TEYRELRGLALKSPEDKGREGNG*SLERRA
Trigger: GGCCCTTCTTTCTAAACTCAACCCATTTCCCTCCCT...CCCCTTATCTTCAGGACTCTTCAGAGCTAATCCTCTAAGTTCTCTGTACTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp GCTATGAATGACTTGGCTTTAATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATCTTCCTGTCCTATaGGTACCAGCACATGAAGCC +
Preference number: 5 (lower is better)
Translates to: AMNDLALMTPKVLDLSSSNLPVL*VPAHEA
Trigger: GGCTTCATGTGCTGGTACCAATAGGACAGGAAGATT...TGAACTGGAGAGATCCAGAACCTTGGGAGTCATTAAAGCCAAGTCATTCATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CAA 90 bp GGCTTTAATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTTGGCTTGGGCACCTCTaGATCCTGGTAGAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: GFNDSQGSGSLQFKFQIIWLGHL*ILVELF
Trigger: GAACAGCTCTACCAGGATCAAGAGGTGCCCAAGCCA...AATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGTCATTAAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp TCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAACAATCATCCCACACCCTCTCTaGACACCTAGCCCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: SQGSGSLQFKFQIIDKTIIPHPL*TPSPSS
Trigger: GGAGCTAGGGCTAGGTGTCAAGAGAGGGTGTGGGAT...GATTGTTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp ATCCTGGGAATTGCAATAGCAGCAGGCAGAGGCTTTTGGTTCCTATTGTTTCCTGGCAGGTGTGATTGTTaGAAATCTCTCCCAATATTG +
Preference number: 5 (lower is better)
Translates to: ILGIAIAAGRGFWFLLFPGRCDC*KSLPIL
Trigger: CAATATTGGGAGAGATTTCAAACAATCACACCTGCC...AGGAAACAATAGGAACCAAAAGCCTCTGCCTGCTGCTATTGCAATTCCCAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CAA 90 bp CCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTGACAAAACAATCTCCTGGTGGGATGTCTTaGAAGCCCCCTTTTCCCACG +
Preference number: 5 (lower is better)
Translates to: PKVLDLSSSNFKLLTKQSPGGMS*KPPFPT
Trigger: CGTGGGAAAAGGGGGCTTCAAAGACATCCCACCAGG...AGATTGTTTTGTCAATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000641323.1
CDS-3UTR CAA 90 bp TTCCAGTTCCTCATTTTTCTTTCTCAGATACTCCCGATCAGGGATCACAGAACTGCTGCTATGAATGACTaGGCTTTAATGACTCCCAAG +
Preference number: 5 (lower is better)
Translates to: FQFLIFLSQILPIRDHRTAAMND*ALMTPK
Trigger: CTTGGGAGTCATTAAAGCCAAGTCATTCATAGCAGC...AGTTCTGTGATCCCTGATCGGGAGTATCTGAGAAAGAAAAATGAGGAACTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
CDS-3UTR CAA 90 bp GGCTTTAATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTAGCAGGCAGAGGCTTTaGGTTCCTATTGTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: GFNDSQGSGSLQFKFQIISRQRL*VPIVSW
Trigger: CCAGGAAACAATAGGAACCAAAAGCCTCTGCCTGCT...AATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGTCATTAAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000225573.5
ENST00000582171.6
ENST00000641323.1
ENST00000641703.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS-3UTR CAA 90 bp AAAATCTTCCTGTCCTATTGGTACCAGCACATGAAGCCCTTCTACAAAATTCCTGGCAGGTGTGATTGTTaGAAATCTCTCCCAATATTG +
Preference number: 5 (lower is better)
Translates to: KIFLSYWYQHMKPFYKIPGRCDC*KSLPIL
Trigger: CAATATTGGGAGAGATTTCAAACAATCACACCTGCC...AGGAATTTTGTAGAAGGGCTTCATGTGCTGGTACCAATAGGACAGGAAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225573.5
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS-3UTR CAA 90 bp GGCTTTAATGACTCCCAAGGTTCTGGATCTCTCCAGTTCAAATTTCAAATTATTCTACAGAGCTTACTGTaGAGCAGAGGAGACAAATAT +
Preference number: 5 (lower is better)
Translates to: GFNDSQGSGSLQFKFQIILQSLL*SRGDKY
Trigger: ATATTTGTCTCCTCTGCTCAACAGTAAGCTCTGTAG...AATAATTTGAAATTTGAACTGGAGAGATCCAGAACCTTGGGAGTCATTAAAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641856.1
CDS GCA 72 bp CTAGCGGCGGCACCTCTCGGTCCCCGCGGTAACTCTTaGGCATGGGTCCCAGGTCCATGGCAGCACTGCGAC +
Preference number: 6 (lower is better)
Translates to: LAAAPLGPRGNS*AWVPGPWQHCD
Trigger: GTCGCAGTGCTGCCATGGACCTGGGACCCATGCGCAAGAGTTACCGCGGGGACCGAGAGGTGCCGCCGCTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641323.1
CDS CCA 72 bp GGCAGCACTGCGACCACACAGGTGACTGAGGTAGCCTaGCCACTCGGCAGGTCGCCCGAACGTCGCCGTGAC +
Preference number: 6 (lower is better)
Translates to: GSTATTQVTEVA*PLGRSPERRRD
Trigger: GTCACGGCGACGTTCGGGCGACCTGCCGAGTGGCCAGGCTACCTCAGTCACCTGTGTGGTCGCAGTGCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000585320.5
ENST00000641305.1
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS TCA 72 bp CCAGGTCCATGGCAGCACTGCGACCACACAGGTGACTaGGGTAGCCTGGCCACTCGGCAGGTCGCCCGAACG +
Preference number: 6 (lower is better)
Translates to: PGPWQHCDHTGD*GSLATRQVART
Trigger: CGTTCGGGCGACCTGCCGAGTGGCCAGGCTACCTCAGTCACCTGTGTGGTCGCAGTGCTGCCATGGACCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000582171.6
ENST00000584061.6
ENST00000585320.5
ENST00000641305.1
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS CCA 72 bp GCGGCACCTCTCGGTCCCCGCGGTAACTCTTGCGCATaGGTCCCAGGTCCATGGCAGCACTGCGACCACACA +
Preference number: 6 (lower is better)
Translates to: AAPLGPRGNSCA*VPGPWQHCDHT
Trigger: TGTGTGGTCGCAGTGCTGCCATGGACCTGGGACCCATGCGCAAGAGTTACCGCGGGGACCGAGAGGTGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641323.1
CDS CAA 90 bp GGCCGCCGGCCACGTGACCCGGCTGTGGCCCGGCACTGGGTTCCTTaGAGTTCGGAACCAATTTCTCACCCTGGACTTCTACCCCGGGGA +
Preference number: 6 (lower is better)
Translates to: GRRPRDPAVARHWVP*SSEPISHPGLLPRG
Trigger: TCCCCGGGGTAGAAGTCCAGGGTGAGAAATTGGTTCCGAACTCAAAGGAACCCAGTGCCGGGCCACAGCCGGGTCACGTGGCCGGCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000641323.1
ENST00000641709.1
ENST00000642017.2
CDS TCA 72 bp TCACCTCCCGATCAGGGATCACAGAACTCTGGTGGCTaGCCACAGCCCCAATCTGGCTGCTCTTGGGGCGGG +
Preference number: 6 (lower is better)
Translates to: SPPDQGSQNSGG*PQPQSGCSWGG
Trigger: CCCGCCCCAAGAGCAGCCAGATTGGGGCTGTGGTCAGCCACCAGAGTTCTGTGATCCCTGATCGGGAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641305.1
CDS GCA 72 bp TCTCCTCAAATGCCTCTCGGTCCCCGCGGTAACTCTTaGGCATGGGTCCCAGGTCCATGGCAGCACTGCGAC +
Preference number: 6 (lower is better)
Translates to: SPQMPLGPRGNS*AWVPGPWQHCD
Trigger: GTCGCAGTGCTGCCATGGACCTGGGACCCATGCGCAAGAGTTACCGCGGGGACCGAGAGGCATTTGAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000583245.6
ENST00000584061.6
ENST00000641305.1
ENST00000642017.2
CDS GCA 72 bp GGGTTTTCCATCTCTCTCGGTCCCCGCGGTAACTCTTaGGCATGGGTCCCAGGTCCATGGCAGCACTGCGAC +
Preference number: 6 (lower is better)
Translates to: GFSISLGPRGNS*AWVPGPWQHCD
Trigger: GTCGCAGTGCTGCCATGGACCTGGGACCCATGCGCAAGAGTTACCGCGGGGACCGAGAGAGATGGAAAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641856.1
CDS CCA 72 bp CAAATGCCTCTCGGTCCCCGCGGTAACTCTTGCGCATaGGTCCCAGGTCCATGGCAGCACTGCGACCACACA +
Preference number: 6 (lower is better)
Translates to: QMPLGPRGNSCA*VPGPWQHCDHT
Trigger: TGTGTGGTCGCAGTGCTGCCATGGACCTGGGACCCATGCGCAAGAGTTACCGCGGGGACCGAGAGGCATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000583245.6
ENST00000584061.6
ENST00000641305.1
ENST00000642017.2
CDS CCA 72 bp TCCATCTCTCTCGGTCCCCGCGGTAACTCTTGCGCATaGGTCCCAGGTCCATGGCAGCACTGCGACCACACA +
Preference number: 6 (lower is better)
Translates to: SISLGPRGNSCA*VPGPWQHCDHT
Trigger: TGTGTGGTCGCAGTGCTGCCATGGACCTGGGACCCATGCGCAAGAGTTACCGCGGGGACCGAGAGAGATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000582171.6
ENST00000585320.5
ENST00000641856.1
CDS GCA 72 bp GCAAACTGTTTCACTCTCGGTCCCCGCGGTAACTCTTaGGCATGGGTCCCAGGTCCATGGCAGCACTGCGAC +
Preference number: 6 (lower is better)
Translates to: ANCFTLGPRGNS*AWVPGPWQHCD
Trigger: GTCGCAGTGCTGCCATGGACCTGGGACCCATGCGCAAGAGTTACCGCGGGGACCGAGAGTGAAACAGTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641709.1
CDS CCA 72 bp TGTTTCACTCTCGGTCCCCGCGGTAACTCTTGCGCATaGGTCCCAGGTCCATGGCAGCACTGCGACCACACA +
Preference number: 6 (lower is better)
Translates to: CFTLGPRGNSCA*VPGPWQHCDHT
Trigger: TGTGTGGTCGCAGTGCTGCCATGGACCTGGGACCCATGCGCAAGAGTTACCGCGGGGACCGAGAGTGAAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641709.1
CDS CCA 72 bp CTCTGTCCTCCAGGAGCAGTCAACAGGATGGCCAGATaGACAGAGGAGGCCTATTTCCCCTCTCCCTACCCC +
Preference number: 6 (lower is better)
Translates to: LCPPGAVNRMAR*TEEAYFPSPYP
Trigger: GGGGTAGGGAGAGGGGAAATAGGCCTCCTCTGTCCATCTGGCCATCCTGTTGACTGCTCCTGGAGGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641305.1
CDS TCA 72 bp CACGTGACCCGGCTGTGGCCCGGCACTGGGTTCCTTTaGGTTCGGAACCAATTTCTCACCCTGGACTTCTAC +
Preference number: 6 (lower is better)
Translates to: HVTRLWPGTGFL*VRNQFLTLDFY
Trigger: GTAGAAGTCCAGGGTGAGAAATTGGTTCCGAACTCAAAGGAACCCAGTGCCGGGCCACAGCCGGGTCACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS CCA 72 bp AGAGGCAGAGTGCCCAGCTGGGATGTTTGCCCAGTCTaGGGACCTTCGCTAGACGTAGCCATAAACTCAGGC +
Preference number: 6 (lower is better)
Translates to: RGRVPSWDVCPV*GPSLDVAINSG
Trigger: GCCTGAGTTTATGGCTACGTCTAGCGAAGGTCCCCAGACTGGGCAAACATCCCAGCTGGGCACTCTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641305.1
CDS CAA 72 bp CCACGTGACCCGGCTGTGGCCCGGCACTGGGTTCCTTaGAGTTCGGAACCAATTTCTCACCCTGGACTTCTA +
Preference number: 6 (lower is better)
Translates to: PRDPAVARHWVP*SSEPISHPGLL
Trigger: TAGAAGTCCAGGGTGAGAAATTGGTTCCGAACTCAAAGGAACCCAGTGCCGGGCCACAGCCGGGTCACGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000225573.5
ENST00000434554.7
ENST00000641323.1
ENST00000641709.1
ENST00000641856.1
ENST00000642017.2
CDS GCA 72 bp GGCTATTTTAGAGGCAGAGTGCCCAGCTGGGATGTTTaGCCAGTCTGGGGACCTTCGCTAGACGTAGCCATA +
Preference number: 6 (lower is better)
Translates to: GYFRGRVPSWDV*PVWGPSLDVAI
Trigger: TATGGCTACGTCTAGCGAAGGTCCCCAGACTGGGCAAACATCCCAGCTGGGCACTCTGCCTCTAAAATAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641305.1
CDS CCA 72 bp ACAGGGCCTTCCACACGCACTCACCTGACGGTTAAGTaGCTCCCAGTAGAAGACAAGGGAAGCAAAGGGATT +
Preference number: 6 (lower is better)
Translates to: TGPSTRTHLTVK*LPVEDKGSKGI
Trigger: AATCCCTTTGCTTCCCTTGTCTTCTACTGGGAGCCACTTAACCGTCAGGTGAGTGCGTGTGGAAGGCCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583245.6
CDS CCA 72 bp CGTTCCTCTCTGTTCGATCGGCTGCCCCACCACTCTTaGCTCCAACTAACTGAGGGCTATTTTAGAGGCAGA +
Preference number: 6 (lower is better)
Translates to: RSSLFDRLPHHS*LQLTEGYFRGR
Trigger: TCTGCCTCTAAAATAGCCCTCAGTTAGTTGGAGCCAAGAGTGGTGGGGCAGCCGATCGAACAGAGAGGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641305.1
CDS TCA 72 bp TCAGGCAGTTTCTTCACAGGGCCTTCCACACGCACCTaGCGGTTAAGTGGCAGCTCTTTTCCTTTTCGACTC +
Preference number: 6 (lower is better)
Translates to: SGSFFTGPSTRT*RLSGSSFPFRL
Trigger: GAGTCGAAAAGGAAAAGAGCTGCCACTTAACCGTCAGGTGCGTGTGGAAGGCCCTGTGAAGAAACTGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584061.6
CDS TCA 72 bp GGGGGAAGAGTTAGAAGAAGGGCCAGGCCCAGTCAATaGTTCATTAACAAGGACTTCCTGGGGATATGTGCT +
Preference number: 6 (lower is better)
Translates to: GGRVRRRARPSQ*FINKDFLGICA
Trigger: AGCACATATCCCCAGGAAGTCCTTGTTAATGAATCATTGACTGGGCCTGGCCCTTCTTCTAACTCTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000641305.1
CDS TCA 72 bp GCAGCAAACTGTTTCACTGGGTCAAGGGAGGTCAGATaGGTCTCCTCAAATGCTATCACTTCCCAGATGAGG +
Preference number: 6 (lower is better)
Translates to: AANCFTGSREVR*VSSNAITSQMR
Trigger: CCTCATCTGGGAAGTGATAGCATTTGAGGAGACTCATCTGACCTCCCTTGACCCAGTGAAACAGTTTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000641427.1
CDS GCA 72 bp GCTCCAAAGTTCGAGCTCTTACCCATTACGAAAGGCTaGCTTTTGAACCCATCTTCATTTGCGTTTCCCCGG +
Preference number: 6 (lower is better)
Translates to: APKFELLPITKG*LLNPSSFAFPR
Trigger: CCGGGGAAACGCAAATGAAGATGGGTTCAAAAGGCAGCCTTTCGTAATGGGTAAGAGCTCGAACTTTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000641427.1
CDS CCA 72 bp GCTGTCCTGGGAAAATTCACTCACCTGACGGTTAAGTaGCTCCCAGTAGAAGACAAGGGAAGCAAAGGGATT +
Preference number: 6 (lower is better)
Translates to: AVLGKFTHLTVK*LPVEDKGSKGI
Trigger: AATCCCTTTGCTTCCCTTGTCTTCTACTGGGAGCCACTTAACCGTCAGGTGAGTGAATTTTCCCAGGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641305.1
CDS CAA 72 bp AAGTTCGAGCTCTTACCCATTACGAAAGGCTGCCTTTaGAACCCATCTTCATTTGCGTTTCCCCGGAACTCC +
Preference number: 6 (lower is better)
Translates to: KFELLPITKGCL*NPSSFAFPRNS
Trigger: GGAGTTCCGGGGAAACGCAAATGAAGATGGGTTCAAAAGGCAGCCTTTCGTAATGGGTAAGAGCTCGAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000641427.1