RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PNPLA8 (Homo sapiens)

Ensembl gene IDs: ENSG00000135241

Ensembl transcript IDs: ENST00000257694.13, ENST00000415498.2, ENST00000422087.5, ENST00000426128.6, ENST00000436062.5, ENST00000453085.1, ENST00000453144.5

Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGGGTTCTTaGAGCAAAGGCAGGATTAGCATCCAGACTCTCGACTCCACTCTT +
Preference number: 1 (lower is better)
Translates to: PTDICLPQGNKQKGS*SKGRISIQTLDSTL
Trigger: AAGAGTGGAGTCGAGAGTCTGGATGCTAATCCTGCCTTTGCTGCAAGAACCCTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR TCA 90 bp TGCAGCAAAGGCAGGATTAGCATCCAGACTCTCGACTCCACTCTTTaGACCACATCTCACAGCCTCTGTGAATTGATATTGCAAAGAAGC +
Preference number: 1 (lower is better)
Translates to: CSKGRISIQTLDSTL*TTSHSLCELILQRS
Trigger: GCTTCTTTGCAATATCAATTCACAGAGGCTGTGAGATGTGGTTCAAAGAGTGGAGTCGAGAGTCTGGATGCTAATCCTGCCTTTGCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR TCA 90 bp CCAGACTCTCGACTCCACTCTTTGAACCACATCTCACAGCCTCTGTaGATTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGG +
Preference number: 1 (lower is better)
Translates to: PDSRLHSLNHISQPL*IDIAKKQYDYLGNR
Trigger: CCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAATTCACAGAGGCTGTGAGATGTGGTTCAAAGAGTGGAGTCGAGAGTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR GCA 90 bp CCTTTCCTCATTTTACAAATGAGATATGCAAAGCCTACAGACATTTaGCTTCCTCAAGGTAACAAACAGAAGGGTTCTTGCAGCAAAGGC +
Preference number: 1 (lower is better)
Translates to: PFLILQMRYAKPTDI*LPQGNKQKGSCSKG
Trigger: GCCTTTGCTGCAAGAACCCTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCATTTGTAAAATGAGGAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR-3UTR CCA 90 bp ATGAGATATGCAAAGCCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGCTGTGTCGCCTAGGCTaGAGTGCACTGGCGCTATTT +
Preference number: 2 (lower is better)
Translates to: MRYAKPTDICLPQGNKQKLCRLG*SALALF
Trigger: AAATAGCGCCAGTGCACTCCAGCCTAGGCGACACAG...CTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR-3UTR TCA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTGCTATGCAAGCTGGTTaGAGCACCGTCTTTTTCAGG +
Preference number: 2 (lower is better)
Translates to: LILQRSNMTIWATGSSFSAMQAG*STVFFR
Trigger: CCTGAAAAAGACGGTGCTTCAACCAGCTTGCATAGC...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR-3UTR GCA 90 bp ATGAGATATGCAAAGCCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGATATTCTCTGTGCTATaGAAGCTGGTTGAAGCACCG +
Preference number: 2 (lower is better)
Translates to: MRYAKPTDICLPQGNKQKIFSVL*KLVEAP
Trigger: CGGTGCTTCAACCAGCTTGCATAGCACAGAGAATAT...CTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR-3UTR GCA 90 bp TTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTTGTATAGGTGTGCACCACCATaGCGGGCTAATGTTTGTATT +
Preference number: 2 (lower is better)
Translates to: LQRSNMTIWATGSSFSLYRCAPP*RANVCI
Trigger: AATACAAACATTAGCCCGGCATGGTGGTGCACACCT...ATACAAACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR-3UTR GCA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTATATTCTCTGTGCTATaGAAGCTGGTTGAAGCACCG +
Preference number: 2 (lower is better)
Translates to: LILQRSNMTIWATGSSFSIFSVL*KLVEAP
Trigger: CGGTGCTTCAACCAGCTTGCATAGCACAGAGAATAT...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR-3UTR CCA 90 bp ATGAGATATGCAAAGCCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGAGCAATATGACTATCTaGGCAACAGGGTCTAGCTTT +
Preference number: 2 (lower is better)
Translates to: MRYAKPTDICLPQGNKQKSNMTI*ATGSSF
Trigger: AAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCT...CTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR-3UTR TCA 90 bp ATGAGATATGCAAAGCCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGATCTCACAGCCTCTGTaGATTGATATTGCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: MRYAKPTDICLPQGNKQKISQPL*IDIAKK
Trigger: CTTCTTTGCAATATCAATTCACAGAGGCTGTGAGAT...CTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR-3UTR TCA 90 bp TTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTTGTATTCTTACCAACTTCCATaGAATCCAGACAGTTCAAAG +
Preference number: 2 (lower is better)
Translates to: LQRSNMTIWATGSSFSLYSYQLP*NPDSSK
Trigger: CTTTGAACTGTCTGGATTTCATGGAAGTTGGTAAGA...ATACAAACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR-3UTR TCA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTCTTACCAACTTCCATaGAATCCAGACAGTTCAAAG +
Preference number: 2 (lower is better)
Translates to: LILQRSNMTIWATGSSFSSYQLP*NPDSSK
Trigger: CTTTGAACTGTCTGGATTTCATGGAAGTTGGTAAGA...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR-3UTR TCA 90 bp ATGAGATATGCAAAGCCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGACAGCCTCTGTGAATTaGTATTGCAAAGAAGCAATA +
Preference number: 2 (lower is better)
Translates to: MRYAKPTDICLPQGNKQKTASVN*YCKEAI
Trigger: TATTGCTTCTTTGCAATATCAATTCACAGAGGCTGT...CTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR-3UTR GCA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTCAAGAATATTCTCTGTaGTATGCAAGCTGGTTGAAG +
Preference number: 2 (lower is better)
Translates to: LILQRSNMTIWATGSSFSQEYSL*YASWLK
Trigger: CTTCAACCAGCTTGCATAGCACAGAGAATATTCTTG...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR-3UTR TCA 90 bp TTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTTGTATCTTATTGAATGTGGTTaGTCTTCTAAACAGACCTTC +
Preference number: 2 (lower is better)
Translates to: LQRSNMTIWATGSSFSLYLIECG*SSKQTF
Trigger: GAAGGTCTGTTTAGAAGATCAACCACATTCAATAAG...ATACAAACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR-3UTR CCA 90 bp ATGAGATATGCAAAGCCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGAAAGATGAGTTTGTTTaGCATGAACAATGTTCCATG +
Preference number: 2 (lower is better)
Translates to: MRYAKPTDICLPQGNKQKKDEFV*HEQCSM
Trigger: CATGGAACATTGTTCATGCCAAACAAACTCATCTTT...CTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR-3UTR CAA 90 bp TTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTTGTATTGCTATGCAAGCTGGTaGAAGCACCGTCTTTTTCAG +
Preference number: 3 (lower is better)
Translates to: LQRSNMTIWATGSSFSLYCYASW*KHRLFQ
Trigger: CTGAAAAAGACGGTGCTTCAACCAGCTTGCATAGCA...ATACAAACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR TCA 72 bp CGACTCCACTCTTTGAACCACATCTCACAGCCTCTGTaGATTGATATTGCAAAGAAGCAATATGACTATCTG +
Preference number: 3 (lower is better)
Translates to: RLHSLNHISQPL*IDIAKKQYDYL
Trigger: CAGATAGTCATATTGCTTCTTTGCAATATCAATTCACAGAGGCTGTGAGATGTGGTTCAAAGAGTGGAGTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR-3UTR CAA 90 bp CACAGCCTCTGTGAATTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACACCCCACAATTCCTTATaGAATGTGGTTGATCTTCTA +
Preference number: 3 (lower is better)
Translates to: HSLCELILQRSNMTIWATPHNSL*NVVDLL
Trigger: TAGAAGATCAACCACATTCAATAAGGAATTGTGGGG...TGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAATTCACAGAGGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR-3UTR CAA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTCCCCACAATTCCTTATaGAATGTGGTTGATCTTCTA +
Preference number: 3 (lower is better)
Translates to: LILQRSNMTIWATGSSFSPHNSL*NVVDLL
Trigger: TAGAAGATCAACCACATTCAATAAGGAATTGTGGGG...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR GCA 72 bp ATTTTACAAATGAGATATGCAAAGCCTACAGACATTTaGCTTCCTCAAGGTAACAAACAGAAGGGTTCTTGC +
Preference number: 3 (lower is better)
Translates to: ILQMRYAKPTDI*LPQGNKQKGSC
Trigger: GCAAGAACCCTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCATTTGTAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR TCA 72 bp TCATGTCGAACCCCACAATTCCTTATTGAATGTGGTTaGTCTTCTAAACAGACCTTCATTTATGAGAACATA +
Preference number: 3 (lower is better)
Translates to: SCRTPQFLIECG*SSKQTFIYENI
Trigger: TATGTTCTCATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGGTTCGACATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
3UTR TCA 72 bp GTAAAACAGATGAACTACATCAGTTTAGGACTAGAGTaGCCTTATGATGAGGTGCAAATATGTAAATATGCA +
Preference number: 3 (lower is better)
Translates to: VKQMNYISLGLE*PYDEVQICKYA
Trigger: TGCATATTTACATATTTGCACCTCATCATAAGGTCACTCTAGTCCTAAACTGATGTAGTTCATCTGTTTTAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp ATGAGATATGCAAAGCCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGGCTCGTTCCCGGCAATaGCGTCCACTCCAACCGGCC +
Preference number: 4 (lower is better)
Translates to: MRYAKPTDICLPQGNKQKARSRQ*RPLQPA
Trigger: GGCCGGTTGGAGTGGACGTCATTGCCGGGAACGAGC...CTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257694.13
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGACCCGCGGGCCGGGGTaGGGATTTTCCGCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMTRGPG*GFSASL
Trigger: GAGCGAGGCGGAAAATCCTCACCCCGGCCCGCGGGT...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000436062.5
ENST00000453144.5
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGGCTCGTTCCCGGCAATaGCGTCCACTCCAACCGGCC +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMARSRQ*RPLQPA
Trigger: GGCCGGTTGGAGTGGACGTCATTGCCGGGAACGAGC...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000436062.5
ENST00000453144.5
CDS-3UTR CCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGGACGCGCTAGAAGTTTaGGTCTACCCGCGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMDALEV*VYPRAG
Trigger: CCCGGCCCGCGGGTAGACCCAAACTTCTAGCGCGTC...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436062.5
ENST00000453144.5
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGCGCCCCCAGCGGAAGTaGCGCGCTAGAAGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMRPQRK*RARSLG
Trigger: ACCCAAACTTCTAGCGCGTCACTTCCGCTGGGGGCG...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000436062.5
ENST00000453144.5
CDS-3UTR TCA 90 bp CACAGCCTCTGTGAATTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACACCGGCCTGCATCAGCTaGGCTTCCAACACAAACACT +
Preference number: 4 (lower is better)
Translates to: HSLCELILQRSNMTIWATPACIS*ASNTNT
Trigger: AGTGTTTGTGTTGGAAGCTCAGCTGATGCAGGCCGG...TGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAATTCACAGAGGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257694.13
CDS-3UTR GCA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTATGGTCTTACCGGGATaGAGGCCGCAGTCACTAGGG +
Preference number: 4 (lower is better)
Translates to: LILQRSNMTIWATGSSFSMVLPG*RPQSLG
Trigger: CCCTAGTGACTGCGGCCTGCATCCCGGTAAGACCAT...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426128.6
CDS-3UTR GCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGATGGTCTTACCGGGATaGAGGCCGCAGTCACTAGGG +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMMVLPG*RPQSLG
Trigger: CCCTAGTGACTGCGGCCTGCATCCCGGTAAGACCAT...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426128.6
ENST00000436062.5
CDS-3UTR CCA 90 bp TTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTTGTATTGCACTGGCGCTATTTaGCTCACTGCAACCTCCGTC +
Preference number: 4 (lower is better)
Translates to: LQRSNMTIWATGSSFSLYCTGAI*LTATSV
Trigger: GACGGAGGTTGCAGTGAGCCAAATAGCGCCAGTGCA...ATACAAACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR CCA 90 bp TTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTTGTATCTGTGTCGCCTAGGCTaGAGTGCACTGGCGCTATTT +
Preference number: 4 (lower is better)
Translates to: LQRSNMTIWATGSSFSLYLCRLG*SALALF
Trigger: AAATAGCGCCAGTGCACTCCAGCCTAGGCGACACAG...ATACAAACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGCCGGCCTGCATCAGCTaGGCTTCCAACACAAACACT +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMPACIS*ASNTNT
Trigger: AGTGTTTGTGTTGGAAGCTCAGCTGATGCAGGCCGG...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000436062.5
ENST00000453144.5
CDS-3UTR TCA 90 bp CACAGCCTCTGTGAATTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGTTCTTCTTAATGCCTaGACTAATGCCCGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: HSLCELILQRSNMTIWATVLLNA*TNARVL
Trigger: CAGGACCCGGGCATTAGTTCAGGCATTAAGAAGAAC...TGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAATTCACAGAGGCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp ATGAGATATGCAAAGCCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGGTTCTTCTTAATGCCTaGACTAATGCCCGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: MRYAKPTDICLPQGNKQKVLLNA*TNARVL
Trigger: CAGGACCCGGGCATTAGTTCAGGCATTAAGAAGAAC...CTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp ATGAGATATGCAAAGCCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGGCTATGCAAGCTGGTTaGAGCACCGTCTTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: MRYAKPTDICLPQGNKQKAMQAG*STVFFR
Trigger: CCTGAAAAAGACGGTGCTTCAACCAGCTTGCATAGC...CTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp TTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTTGTATCTCGACTCCACTCTTTaGACCACATCTCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: LQRSNMTIWATGSSFSLYLDSTL*TTSHSL
Trigger: GAGGCTGTGAGATGTGGTTCAAAGAGTGGAGTCGAG...ATACAAACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTCTCGACTCCACTCTTTaGACCACATCTCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: LILQRSNMTIWATGSSFSLDSTL*TTSHSL
Trigger: GAGGCTGTGAGATGTGGTTCAAAGAGTGGAGTCGAG...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR GCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGAGAAGACAATCGGGATaGAGGCCGCAGTCACTAGGG +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMRRQSG*RPQSLG
Trigger: CCCTAGTGACTGCGGCCTGCATCCCGATTGTCTTCT...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000422087.5
CDS-3UTR GCA 90 bp ATGAGATATGCAAAGCCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGTGCCCAGGGATACTATaGACTCTAACGGCACATCTG +
Preference number: 4 (lower is better)
Translates to: MRYAKPTDICLPQGNKQKCPGIL*TLTAHL
Trigger: CAGATGTGCCGTTAGAGTGCATAGTATCCCTGGGCA...CTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR GCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGTCTTGCATTACGGGATaGAGGCCGCAGTCACTAGGG +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMSCITG*RPQSLG
Trigger: CCCTAGTGACTGCGGCCTGCATCCCGTAATGCAAGA...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453144.5
CDS-3UTR CCA 90 bp ATGAGATATGCAAAGCCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGAATTTTCGTAGGGTCTaGAGAGCAACCACGCCCCTT +
Preference number: 4 (lower is better)
Translates to: MRYAKPTDICLPQGNKQKNFRRV*RATTPL
Trigger: AAGGGGCGTGGTTGCTCTCCAGACCCTACGAAAATT...CTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR CCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGCTGTGTCGCCTAGGCTaGAGTGCACTGGCGCTATTT +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMLCRLG*SALALF
Trigger: AAATAGCGCCAGTGCACTCCAGCCTAGGCGACACAG...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp ATGAGATATGCAAAGCCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGCGTATGTACAGATTCTaGGCCTGGCTTATAAGCCAG +
Preference number: 4 (lower is better)
Translates to: MRYAKPTDICLPQGNKQKRMYRF*AWLISQ
Trigger: CTGGCTTATAAGCCAGGCTCAGAATCTGTACATACG...CTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp CACAGCCTCTGTGAATTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACATCTTTGCTGACAGCCTaGTCAGTTTTAGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: HSLCELILQRSNMTIWATSLLTA*SVLAGS
Trigger: AGAGCCTGCTAAAACTGATCAGGCTGTCAGCAAAGA...TGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAATTCACAGAGGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR GCA 90 bp TTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTTGTATTGCCCAGGGATACTATaGACTCTAACGGCACATCTG +
Preference number: 4 (lower is better)
Translates to: LQRSNMTIWATGSSFSLYCPGIL*TLTAHL
Trigger: CAGATGTGCCGTTAGAGTGCATAGTATCCCTGGGCA...ATACAAACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR GCA 90 bp ATGAGATATGCAAAGCCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGAGGTGTGCACCACCATaGCGGGCTAATGTTTGTATT +
Preference number: 4 (lower is better)
Translates to: MRYAKPTDICLPQGNKQKRCAPP*RANVCI
Trigger: AATACAAACATTAGCCCGGCATGGTGGTGCACACCT...CTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR GCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGCCCACAAACACTTCTTaGATTACGGGATGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMPTNTS*ITGCRP
Trigger: CGGCCTGCATCCCGTAATGCAAGAAGTGTTTGTGGG...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453144.5
CDS-3UTR TCA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTCGTATGTACAGATTCTaGGCCTGGCTTATAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LILQRSNMTIWATGSSFSRMYRF*AWLISQ
Trigger: CTGGCTTATAAGCCAGGCTCAGAATCTGTACATACG...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp TTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTTGTATTCTTTGCTGACAGCCTaGTCAGTTTTAGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LQRSNMTIWATGSSFSLYSLLTA*SVLAGS
Trigger: AGAGCCTGCTAAAACTGATCAGGCTGTCAGCAAAGA...ATACAAACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGGTTCTTCTTAATGCCTaGACTAATGCCCGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMVLLNA*TNARVL
Trigger: CAGGACCCGGGCATTAGTTCAGGCATTAAGAAGAAC...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR TCA 90 bp ATGAGATATGCAAAGCCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGTCCTCCACCATCAATTaGGAGAATTCGGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: MRYAKPTDICLPQGNKQKSSTIN*ENSDSS
Trigger: AGAGGAATCCGAATTCTCTCAATTGATGGTGGAGGA...CTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGGCTATGCAAGCTGGTTaGAGCACCGTCTTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMAMQAG*STVFFR
Trigger: CCTGAAAAAGACGGTGCTTCAACCAGCTTGCATAGC...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR GCA 90 bp CACAGCCTCTGTGAATTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGCTTATAAGCCAGGATaGCAGGATCTGGAGATCTTA +
Preference number: 4 (lower is better)
Translates to: HSLCELILQRSNMTIWATAYKPG*QDLEIL
Trigger: TAAGATCTCCAGATCCTGGCATCCTGGCTTATAAGC...TGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAATTCACAGAGGCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR GCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGTGCCCAGGGATACTATaGACTCTAACGGCACATCTG +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMCPGIL*TLTAHL
Trigger: CAGATGTGCCGTTAGAGTGCATAGTATCCCTGGGCA...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR GCA 90 bp CACAGCCTCTGTGAATTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAAAACAGAAGGGTTCTTaGAGCAAAGGCAGGATTAGC +
Preference number: 4 (lower is better)
Translates to: HSLCELILQRSNMTIWATKQKGS*SKGRIS
Trigger: GCTAATCCTGCCTTTGCTGCAAGAACCCTTCTGTTT...TGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAATTCACAGAGGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR CCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGAATTTTCGTAGGGTCTaGAGAGCAACCACGCCCCTT +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMNFRRV*RATTPL
Trigger: AAGGGGCGTGGTTGCTCTCCAGACCCTACGAAAATT...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGCGTATGTACAGATTCTaGGCCTGGCTTATAAGCCAG +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMRMYRF*AWLISQ
Trigger: CTGGCTTATAAGCCAGGCTCAGAATCTGTACATACG...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGTCTTTGCTGACAGCCTaGTCAGTTTTAGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMSLLTA*SVLAGS
Trigger: AGAGCCTGCTAAAACTGATCAGGCTGTCAGCAAAGA...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR TCA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTCCTCCACCATCAATTaGGAGAATTCGGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: LILQRSNMTIWATGSSFSSSTIN*ENSDSS
Trigger: AGAGGAATCCGAATTCTCTCAATTGATGGTGGAGGA...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp ATGAGATATGCAAAGCCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGTCATCCAAGGGCATATaGAACAACCCCAACATGAAA +
Preference number: 4 (lower is better)
Translates to: MRYAKPTDICLPQGNKQKSSKGI*NNPNMK
Trigger: TTTCATGTTGGGGTTGTTTCATATGCCCTTGGATGA...CTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTGCAAAGAAGCAATATaGCTATCTGGGCAACAGGGT +
Preference number: 4 (lower is better)
Translates to: LILQRSNMTIWATGSSFSCKEAI*LSGQQG
Trigger: ACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCA...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR GCA 90 bp ATGAGATATGCAAAGCCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGACATGTGGGGTTTCTTaGTGTTTCAATCATCAGTGC +
Preference number: 4 (lower is better)
Translates to: MRYAKPTDICLPQGNKQKTCGVS*CFNHQC
Trigger: GCACTGATGATTGAAACAGCAAGAAACCCCACATGT...CTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR GCA 90 bp TTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTTGTATATATTCTCTGTGCTATaGAAGCTGGTTGAAGCACCG +
Preference number: 4 (lower is better)
Translates to: LQRSNMTIWATGSSFSLYIFSVL*KLVEAP
Trigger: CGGTGCTTCAACCAGCTTGCATAGCACAGAGAATAT...ATACAAACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR CCA 90 bp TTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTTGTATAAATGCCATAATTCATaGTCTTACCGGGATGCAGGC +
Preference number: 4 (lower is better)
Translates to: LQRSNMTIWATGSSFSLYKCHNS*SYRDAG
Trigger: GCCTGCATCCCGGTAAGACCATGAATTATGGCATTT...ATACAAACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426128.6
CDS-3UTR TCA 90 bp ATGAGATATGCAAAGCCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGTCTCTAACTGCAGCCTaGAGAGTTTCATCCTTAATT +
Preference number: 4 (lower is better)
Translates to: MRYAKPTDICLPQGNKQKSLTAA*RVSSLI
Trigger: AATTAAGGATGAAACTCTTCAGGCTGCAGTTAGAGA...CTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGTCCTCCACCATCAATTaGGAGAATTCGGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMSSTIN*ENSDSS
Trigger: AGAGGAATCCGAATTCTCTCAATTGATGGTGGAGGA...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR TCA 90 bp TTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTTGTATTCATCCAAGGGCATATaGAACAACCCCAACATGAAA +
Preference number: 4 (lower is better)
Translates to: LQRSNMTIWATGSSFSLYSSKGI*NNPNMK
Trigger: TTTCATGTTGGGGTTGTTTCATATGCCCTTGGATGA...ATACAAACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp CACAGCCTCTGTGAATTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAAATGACCATAGTTTCTaGACACAAAAGCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: HSLCELILQRSNMTIWATNDHSF*TQKLWV
Trigger: CACCCAAAGCTTTTGTGTTCAGAAACTATGGTCATT...TGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAATTCACAGAGGCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257694.13
CDS-3UTR TCA 90 bp ATGAGATATGCAAAGCCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGTCTTACCAACTTCCATaGAATCCAGACAGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: MRYAKPTDICLPQGNKQKSYQLP*NPDSSK
Trigger: CTTTGAACTGTCTGGATTTCATGGAAGTTGGTAAGA...CTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGTGCAAAGAAGCAATATaGCTATCTGGGCAACAGGGT +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMCKEAI*LSGQQG
Trigger: ACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCA...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTAGTTTAGGACTAGAGTaGCCTTATGATGAGGTGCAA +
Preference number: 4 (lower is better)
Translates to: LILQRSNMTIWATGSSFSSLGLE*PYDEVQ
Trigger: TTGCACCTCATCATAAGGTCACTCTAGTCCTAAACT...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR GCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGGCTTATAAGCCAGGATaGCAGGATCTGGAGATCTTA +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMAYKPG*QDLEIL
Trigger: TAAGATCTCCAGATCCTGGCATCCTGGCTTATAAGC...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR GCA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTACATGTGGGGTTTCTTaGTGTTTCAATCATCAGTGC +
Preference number: 4 (lower is better)
Translates to: LILQRSNMTIWATGSSFSTCGVS*CFNHQC
Trigger: GCACTGATGATTGAAACAGCAAGAAACCCCACATGT...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR GCA 90 bp TTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTTGTATAGACATTTACACTCATaGATAGCTAATGCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: LQRSNMTIWATGSSFSLYRHLHS*IANAEG
Trigger: CCCTTCGGCATTAGCTATGCATGAGTGTAAATGTCT...ATACAAACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR GCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGATATTCTCTGTGCTATaGAAGCTGGTTGAAGCACCG +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMIFSVL*KLVEAP
Trigger: CGGTGCTTCAACCAGCTTGCATAGCACAGAGAATAT...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR GCA 90 bp CACAGCCTCTGTGAATTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACACAAGAATATTCTCTGTaGTATGCAAGCTGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: HSLCELILQRSNMTIWATQEYSL*YASWLK
Trigger: CTTCAACCAGCTTGCATAGCACAGAGAATATTCTTG...TGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAATTCACAGAGGCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR GCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGAAACAGAAGGGTTCTTaGAGCAAAGGCAGGATTAGC +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMKQKGS*SKGRIS
Trigger: GCTAATCCTGCCTTTGCTGCAAGAACCCTTCTGTTT...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR CCA 90 bp CACAGCCTCTGTGAATTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACATCCCTCTATTTACTATaGTACTTACAGCAGCTACCT +
Preference number: 4 (lower is better)
Translates to: HSLCELILQRSNMTIWATSLYLL*YLQQLP
Trigger: AGGTAGCTGCTGTAAGTACCATAGTAAATAGAGGGA...TGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAATTCACAGAGGCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257694.13
CDS-3UTR CCA 90 bp TTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTTGTATAGCAATATGACTATCTaGGCAACAGGGTCTAGCTTT +
Preference number: 4 (lower is better)
Translates to: LQRSNMTIWATGSSFSLYSNMTI*ATGSSF
Trigger: AAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCT...ATACAAACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR CCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGAAATGCCATAATTCATaGTCTTACCGGGATGCAGGC +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMKCHNS*SYRDAG
Trigger: GCCTGCATCCCGGTAAGACCATGAATTATGGCATTT...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426128.6
ENST00000436062.5
CDS-3UTR TCA 90 bp CACAGCCTCTGTGAATTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACATTTATCTTCAAGTTCTaGTTTGTCCCGGAAATGTTC +
Preference number: 4 (lower is better)
Translates to: HSLCELILQRSNMTIWATFIFKF*FVPEMF
Trigger: GAACATTTCCGGGACAAATCAGAACTTGAAGATAAA...TGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAATTCACAGAGGCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGTCATCCAAGGGCATATaGAACAACCCCAACATGAAA +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMSSKGI*NNPNMK
Trigger: TTTCATGTTGGGGTTGTTTCATATGCCCTTGGATGA...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR TCA 90 bp TTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTTGTATATCTCACAGCCTCTGTaGATTGATATTGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: LQRSNMTIWATGSSFSLYISQPL*IDIAKK
Trigger: CTTCTTTGCAATATCAATTCACAGAGGCTGTGAGAT...ATACAAACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGAGTTTAGGACTAGAGTaGCCTTATGATGAGGTGCAA +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMSLGLE*PYDEVQ
Trigger: TTGCACCTCATCATAAGGTCACTCTAGTCCTAAACT...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR GCA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTGTTTCAATCATCAGTaGAGATCCCATCCTATCCTT +
Preference number: 4 (lower is better)
Translates to: LILQRSNMTIWATGSSFSCFNHQ*RSHPIL
Trigger: AAGGATAGGATGGGATCTGCACTGATGATTGAAACA...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR GCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGACATGTGGGGTTTCTTaGTGTTTCAATCATCAGTGC +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMTCGVS*CFNHQC
Trigger: GCACTGATGATTGAAACAGCAAGAAACCCCACATGT...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR GCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGAGACATTTACACTCATaGATAGCTAATGCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMRHLHS*IANAEG
Trigger: CCCTTCGGCATTAGCTATGCATGAGTGTAAATGTCT...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR CCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGAGCAATATGACTATCTaGGCAACAGGGTCTAGCTTT +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMSNMTI*ATGSSF
Trigger: AAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCT...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTCCTGTTCTTCTGACTaGCTCTTTGAATCATACTTT +
Preference number: 4 (lower is better)
Translates to: LILQRSNMTIWATGSSFSSCSSD*LFESYF
Trigger: AAAGTATGATTCAAAGAGTCAGTCAGAAGAACAGGA...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGTCTCTAACTGCAGCCTaGAGAGTTTCATCCTTAATT +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMSLTAA*RVSSLI
Trigger: AATTAAGGATGAAACTCTTCAGGCTGCAGTTAGAGA...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGAATGACCATAGTTTCTaGACACAAAAGCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMNDHSF*TQKLWV
Trigger: CACCCAAAGCTTTTGTGTTCAGAAACTATGGTCATT...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000436062.5
ENST00000453144.5
CDS-3UTR TCA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTCCAAATAATGAGAGTTaGTTCCAGGAAAATGACCAT +
Preference number: 4 (lower is better)
Translates to: LILQRSNMTIWATGSSFSPNNES*FQENDH
Trigger: ATGGTCATTTTCCTGGAATCAACTCTCATTATTTGG...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257694.13
CDS-3UTR TCA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTCTTATTGAATGTGGTTaGTCTTCTAAACAGACCTTC +
Preference number: 4 (lower is better)
Translates to: LILQRSNMTIWATGSSFSLIECG*SSKQTF
Trigger: GAAGGTCTGTTTAGAAGATCAACCACATTCAATAAG...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTCCTCATTTTACAAATaGGATATGCAAAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: LILQRSNMTIWATGSSFSSSFYK*DMQSLQ
Trigger: CTGTAGGCTTTGCATATCTCATTTGTAAAATGAGGA...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGTTTCCACATGAATTTTaGGAGGCACAAACATTCGGA +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMFPHEF*EAQTFG
Trigger: TCCGAATGTTTGTGCCTCTCAAAATTCATGTGGAAA...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422087.5
CDS-3UTR GCA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTCTTACTGCAAGAATGTaGTTCACTTTTGGTCCATTT +
Preference number: 4 (lower is better)
Translates to: LILQRSNMTIWATGSSFSLTARM*FTFGPF
Trigger: AAATGGACCAAAAGTGAAGCACATTCTTGCAGTAAG...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR GCA 90 bp TTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTTGTATCAAAATTTCTCTAACTaGAGCCTGAAGAGTTTCATC +
Preference number: 4 (lower is better)
Translates to: LQRSNMTIWATGSSFSLYQNFSN*SLKSFI
Trigger: GATGAAACTCTTCAGGCTGCAGTTAGAGAAATTTTG...ATACAAACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR GCA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTCTAATATGGCACCTGTaGTTACACCACAAATGTAAT +
Preference number: 4 (lower is better)
Translates to: LILQRSNMTIWATGSSFSLIWHL*LHHKCN
Trigger: ATTACATTTGTGGTGTAAGCACAGGTGCCATATTAG...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR GCA 90 bp TTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTTGTATCTAATATGGCACCTGTaGTTACACCACAAATGTAAT +
Preference number: 4 (lower is better)
Translates to: LQRSNMTIWATGSSFSLYLIWHL*LHHKCN
Trigger: ATTACATTTGTGGTGTAAGCACAGGTGCCATATTAG...ATACAAACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR GCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGTGTTTCAATCATCAGTaGAGATCCCATCCTATCCTT +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMCFNHQ*RSHPIL
Trigger: AAGGATAGGATGGGATCTGCACTGATGATTGAAACA...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR GCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGCAAGAATATTCTCTGTaGTATGCAAGCTGGTTGAAG +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMQEYSL*YASWLK
Trigger: CTTCAACCAGCTTGCATAGCACAGAGAATATTCTTG...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR CCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGTCCCTCTATTTACTATaGTACTTACAGCAGCTACCT +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMSLYLL*YLQQLP
Trigger: AGGTAGCTGCTGTAAGTACCATAGTAAATAGAGGGA...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000436062.5
ENST00000453144.5
CDS-3UTR CCA 90 bp CACAGCCTCTGTGAATTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAAAAGATGAGTTTGTTTaGCATGAACAATGTTCCATG +
Preference number: 4 (lower is better)
Translates to: HSLCELILQRSNMTIWATKDEFV*HEQCSM
Trigger: CATGGAACATTGTTCATGCCAAACAAACTCATCTTT...TGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAATTCACAGAGGCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGTCCTGTTCTTCTGACTaGCTCTTTGAATCATACTTT +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMSCSSD*LFESYF
Trigger: AAAGTATGATTCAAAGAGTCAGTCAGAAGAACAGGA...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGCCAAATAATGAGAGTTaGTTCCAGGAAAATGACCAT +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMPNNES*FQENDH
Trigger: ATGGTCATTTTCCTGGAATCAACTCTCATTATTTGG...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000436062.5
ENST00000453144.5
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGCTTATTGAATGTGGTTaGTCTTCTAAACAGACCTTC +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMLIECG*SSKQTF
Trigger: GAAGGTCTGTTTAGAAGATCAACCACATTCAATAAG...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGACAGCCTCTGTGAATTaGTATTGCAAAGAAGCAATA +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMTASVN*YCKEAI
Trigger: TATTGCTTCTTTGCAATATCAATTCACAGAGGCTGT...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGTCCTCATTTTACAAATaGGATATGCAAAGCCTACAG +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMSSFYK*DMQSLQ
Trigger: CTGTAGGCTTTGCATATCTCATTTGTAAAATGAGGA...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR TCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGGTTATGATTTCCACATaGATTTTGAGAGGCACAAAC +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMVMIST*ILRGTN
Trigger: GTTTGTGCCTCTCAAAATTCATGTGGAAATCATAAC...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422087.5
CDS-3UTR GCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGCTTACTGCAAGAATGTaGTTCACTTTTGGTCCATTT +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMLTARM*FTFGPF
Trigger: AAATGGACCAAAAGTGAAGCACATTCTTGCAGTAAG...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR GCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGCAAAATTTCTCTAACTaGAGCCTGAAGAGTTTCATC +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMQNFSN*SLKSFI
Trigger: GATGAAACTCTTCAGGCTGCAGTTAGAGAAATTTTG...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR GCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGCTAATATGGCACCTGTaGTTACACCACAAATGTAAT +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMLIWHL*LHHKCN
Trigger: ATTACATTTGTGGTGTAAGCACAGGTGCCATATTAG...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR GCA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGAATGTTCCATGTAAGTaGATCTTACCAACTTCCATG +
Preference number: 4 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMNVPCK*ILPTSM
Trigger: CATGGAAGTTGGTAAGATGCACTTACATGGAACATT...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR CCA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTCCATCAAGCATTATATaGACTTCTTCTGTATCTGTA +
Preference number: 4 (lower is better)
Translates to: LILQRSNMTIWATGSSFSPSSII*TSSVSV
Trigger: TACAGATACAGAAGAAGTCCATATAATGCTTGATGG...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR CCA 90 bp TTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTTGTATAAAGATGAGTTTGTTTaGCATGAACAATGTTCCATG +
Preference number: 4 (lower is better)
Translates to: LQRSNMTIWATGSSFSLYKDEFV*HEQCSM
Trigger: CATGGAACATTGTTCATGCCAAACAAACTCATCTTT...ATACAAACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
3UTR CAA 72 bp TCAAAGTTAACTCATGTCGAACCCCACAATTCCTTATaGAATGTGGTTGATCTTCTAAACAGACCTTCATTT +
Preference number: 4 (lower is better)
Translates to: SKLTHVEPHNSL*NVVDLLNRPSF
Trigger: AAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGGTTCGACATGAGTTAACTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS TCA 90 bp CTTGCTAAAACTGGACTCAGCAGGCCTAAGACAGGGGCCCAAGGATaGGGCCTAGTTGGGAAGAGGGCTCAGAGGAGCCTAACTAAAGTA +
Preference number: 5 (lower is better)
Translates to: LAKTGLSRPKTGAQG*GLVGKRAQRSLTKV
Trigger: TACTTTAGTTAGGCTCCTCTGAGCCCTCTTCCCAACTAGGCCTCATCCTTGGGCCCCTGTCTTAGGCCTGCTGAGTCCAGTTTTAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415498.2
CDS-3UTR CAA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGCAGGCCTCTGCCTCCTaGTCAATCTCCGTTCCTCCC +
Preference number: 5 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMQASAS*SISVPP
Trigger: GGGAGGAACGGAGATTGACAAGGAGGCAGAGGCCTG...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436062.5
ENST00000453144.5
CDS-3UTR CAA 90 bp TTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTTGTATGAGCAACCACGCCCCTaGTTCCTCCACCATCAATTG +
Preference number: 5 (lower is better)
Translates to: LQRSNMTIWATGSSFSLYEQPRP*FLHHQL
Trigger: CAATTGATGGTGGAGGAACAAGGGGCGTGGTTGCTC...ATACAAACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR CAA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGGAGCAACCACGCCCCTaGTTCCTCCACCATCAATTG +
Preference number: 5 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMEQPRP*FLHHQL
Trigger: CAATTGATGGTGGAGGAACAAGGGGCGTGGTTGCTC...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR CAA 90 bp CACAGCCTCTGTGAATTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGAAGGACTTGTAGGCTaGTCCACCGTATGTACAGAT +
Preference number: 5 (lower is better)
Translates to: HSLCELILQRSNMTIWATEGLVG*STVCTD
Trigger: ATCTGTACATACGGTGGACAAGCCTACAAGTCCTTC...TGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAATTCACAGAGGCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR CAA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGTCCCACAAACACTTCTaGCATTACGGGATGCAGGCC +
Preference number: 5 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMSHKHF*HYGMQA
Trigger: GGCCTGCATCCCGTAATGCAAGAAGTGTTTGTGGGA...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453144.5
CDS-3UTR CAA 90 bp CACAGCCTCTGTGAATTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAACTTTTGTAAGTCCCTaGGGAGCAGAAGTGCTAAGT +
Preference number: 5 (lower is better)
Translates to: HSLCELILQRSNMTIWATTFVSP*GAEVLS
Trigger: ACTTAGCACTTCTGCTCCCAAGGGACTTACAAAAGT...TGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAATTCACAGAGGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR CAA 90 bp ATGAGATATGCAAAGCCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGTTCCTCCACCATCAATaGAGAGAATTCGGATTCCTC +
Preference number: 5 (lower is better)
Translates to: MRYAKPTDICLPQGNKQKFLHHQ*REFGFL
Trigger: GAGGAATCCGAATTCTCTCAATTGATGGTGGAGGAA...CTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR CAA 90 bp CACAGCCTCTGTGAATTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAAAGAAATACAGTTGCTaGCTTCTCTGCTTCCCACAA +
Preference number: 5 (lower is better)
Translates to: HSLCELILQRSNMTIWATKKYSC*LLCFPQ
Trigger: TTGTGGGAAGCAGAGAAGCAAGCAACTGTATTTCTT...TGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAATTCACAGAGGCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR CAA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGGAAGGACTTGTAGGCTaGTCCACCGTATGTACAGAT +
Preference number: 5 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMEGLVG*STVCTD
Trigger: ATCTGTACATACGGTGGACAAGCCTACAAGTCCTTC...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR CAA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGTGCTATGCAAGCTGGTaGAAGCACCGTCTTTTTCAG +
Preference number: 5 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMCYASW*KHRLFQ
Trigger: CTGAAAAAGACGGTGCTTCAACCAGCTTGCATAGCA...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR CAA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGACTTTTGTAAGTCCCTaGGGAGCAGAAGTGCTAAGT +
Preference number: 5 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMTFVSP*GAEVLS
Trigger: ACTTAGCACTTCTGCTCCCAAGGGACTTACAAAAGT...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR CAA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGTTCCTCCACCATCAATaGAGAGAATTCGGATTCCTC +
Preference number: 5 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMFLHHQ*REFGFL
Trigger: GAGGAATCCGAATTCTCTCAATTGATGGTGGAGGAA...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR CAA 90 bp ATGAGATATGCAAAGCCTACAGACATTTGCCTTCCTCAAGGTAACAAACAGAAGCACAGCCTCTGTGAATaGATATTGCAAAGAAGCAAT +
Preference number: 5 (lower is better)
Translates to: MRYAKPTDICLPQGNKQKHSLCE*ILQRSN
Trigger: ATTGCTTCTTTGCAATATCAATTCACAGAGGCTGTG...CTTCTGTTTGTTACCTTGAGGAAGGCAAATGTCTGTAGGCTTTGCATATCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR CAA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGAAGAAATACAGTTGCTaGCTTCTCTGCTTCCCACAA +
Preference number: 5 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMKKYSC*LLCFPQ
Trigger: TTGTGGGAAGCAGAGAAGCAAGCAACTGTATTTCTT...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS-3UTR CAA 90 bp TTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTTGTATCACAGCCTCTGTGAATaGATATTGCAAAGAAGCAAT +
Preference number: 5 (lower is better)
Translates to: LQRSNMTIWATGSSFSLYHSLCE*ILQRSN
Trigger: ATTGCTTCTTTGCAATATCAATTCACAGAGGCTGTG...ATACAAACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR CAA 90 bp TTGATATTGCAAAGAAGCAATATGACTATCTGGGCAACAGGGTCTAGCTTTAGTTCTTCAAGTTCTGATTaGTCCCGGAAATGTTCATTT +
Preference number: 5 (lower is better)
Translates to: LILQRSNMTIWATGSSFSSSSSD*SRKCSF
Trigger: AAATGAACATTTCCGGGACAAATCAGAACTTGAAGA...ACTAAAGCTAGACCCTGTTGCCCAGATAGTCATATTGCTTCTTTGCAATATCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000257694.13
ENST00000426128.6
CDS-3UTR CAA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGAAGCAAACCTCCATCTaGATGAAGATCATTTCCCAA +
Preference number: 5 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMKQTSI*MKIISQ
Trigger: TTGGGAAATGATCTTCATCAAGATGGAGGTTTGCTT...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000436062.5
ENST00000453144.5
CDS-3UTR CAA 90 bp CCCCACAATTCCTTATTGAATGTGGTTGATCTTCTAAACAGACCTTCATTTATGCCCCACAATTCCTTATaGAATGTGGTTGATCTTCTA +
Preference number: 5 (lower is better)
Translates to: PHNSLLNVVDLLNRPSFMPHNSL*NVVDLL
Trigger: TAGAAGATCAACCACATTCAATAAGGAATTGTGGGG...CATAAATGAAGGTCTGTTTAGAAGATCAACCACATTCAATAAGGAATTGTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453144.5
CDS TCA 72 bp ACTGGACTCAGCAGGCCTAAGACAGGGGCCCAAGGATaGGGCCTAGTTGGGAAGAGGGCTCAGAGGAGCCTA +
Preference number: 6 (lower is better)
Translates to: TGLSRPKTGAQG*GLVGKRAQRSL
Trigger: TAGGCTCCTCTGAGCCCTCTTCCCAACTAGGCCTCATCCTTGGGCCCCTGTCTTAGGCCTGCTGAGTCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415498.2
CDS CCA 72 bp GTTGGGAAGAGGGCTCAGAGGAGCCTAACTAAAGTATaGTCAAGGAGAGAGCACCACCATTCCCTCTCCGCT +
Preference number: 6 (lower is better)
Translates to: VGKRAQRSLTKV*SRREHHHSLSA
Trigger: AGCGGAGAGGGAATGGTGGTGCTCTCTCCTTGACCATACTTTAGTTAGGCTCCTCTGAGCCCTCTTCCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415498.2
CDS TCA 72 bp AGGACTTGTAGGCTTGTCCACCGTATGTACAGATTCTaGGCCTGGCTTATAAGCCAGGATGCCAGGATCTGG +
Preference number: 6 (lower is better)
Translates to: RTCRLVHRMYRF*AWLISQDARIW
Trigger: CCAGATCCTGGCATCCTGGCTTATAAGCCAGGCTCAGAATCTGTACATACGGTGGACAAGCCTACAAGTCCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000257694.13
ENST00000422087.5
ENST00000426128.6
ENST00000436062.5
ENST00000453085.1
ENST00000453144.5
CDS TCA 72 bp GTCATGAAGTCTGATGAGTTTTACCGCAGAATTTCTTaGATCGTTCCTCTGCTCCACATTCGCATTTCCACT +
Preference number: 6 (lower is better)
Translates to: VMKSDEFYRRIS*IVPLLHIRIST
Trigger: AGTGGAAATGCGAATGTGGAGCAGAGGAACGATTCAAGAAATTCTGCGGTAAAACTCATCAGACTTCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453085.1
CDS TCA 72 bp TATAACACTAAGATTCTTGCTGAAGACAGGCGGAGATaGTCAATTATCAAGGCTAGGAGATACTCTCTAAAC +
Preference number: 6 (lower is better)
Translates to: YNTKILAEDRRR*SIIKARRYSLN
Trigger: GTTTAGAGAGTATCTCCTAGCCTTGATAATTGATCATCTCCGCCTGTCTTCAGCAAGAATCTTAGTGTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415498.2
CDS TCA 72 bp ATTTTGAGAGGCACAAACATTCGGACCATAGCAGTATaGTTCCAGCTGTATAACACTAAGATTCTTGCTGAA +
Preference number: 6 (lower is better)
Translates to: ILRGTNIRTIAV*FQLYNTKILAE
Trigger: TTCAGCAAGAATCTTAGTGTTATACAGCTGGAATCATACTGCTATGGTCCGAATGTTTGTGCCTCTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415498.2
CDS TCA 72 bp ATTTTGAGAGGCACAAACATTCGGACCATAGCAGTATaGTTCCAGCTGTATAACACTCTAGAAAGGCAAAAT +
Preference number: 6 (lower is better)
Translates to: ILRGTNIRTIAV*FQLYNTLERQN
Trigger: ATTTTGCCTTTCTAGAGTGTTATACAGCTGGAATCATACTGCTATGGTCCGAATGTTTGTGCCTCTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422087.5