RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PNPLA7 (Homo sapiens)

Ensembl gene IDs: ENSG00000130653

Ensembl transcript IDs: ENST00000277531.8, ENST00000406427.6, ENST00000434090.2, ENST00000469998.1, ENST00000487228.1, ENST00000491019.2, ENST00000492278.5

Found 638 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAGTCAGGGCTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTaGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGC +
Preference number: 1 (lower is better)
Translates to: EVRASSRAGTEAPRT*QEPQPWGQSHGRRC
Trigger: GCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAGCCCTGACTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
3UTR CCA 90 bp CTCCATGAAAAGCCGCAGCTGGAAGCCGGAGGATGGTGGACGGGATaGCCGCGCGGACGGAGACCGTTTTGTAAGGTGCAGCATGGCCGG +
Preference number: 1 (lower is better)
Translates to: LHEKPQLEAGGWWTG*PRGRRPFCKVQHGR
Trigger: CCGGCCATGCTGCACCTTACAAAACGGTCTCCGTCCGCGCGGCCATCCCGTCCACCATCCTCCGGCTTCCAGCTGCGGCTTTTCATGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491019.2
3UTR CCA 90 bp CAGAGTTTCCGGATATTTCTCAAAAACTCCATGAAAAGCCGCAGCTaGAAGCCGGAGGATGGTGGACGGGATGGCCGCGCGGACGGAGAC +
Preference number: 1 (lower is better)
Translates to: QSFRIFLKNSMKSRS*KPEDGGRDGRADGD
Trigger: GTCTCCGTCCGCGCGGCCATCCCGTCCACCATCCTCCGGCTTCCAGCTGCGGCTTTTCATGGAGTTTTTGAGAAATATCCGGAAACTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491019.2
3UTR CAA 90 bp CAGGGCAGCAGGCAGTTCACAGGACAGCAGGCAGTTCACAGGGCTTaGGGGGCCTCACAGGGCAGCAGGTGGTTCACAGGGCTTCGGGGG +
Preference number: 2 (lower is better)
Translates to: QGSRQFTGQQAVHRA*GASQGSRWFTGLRG
Trigger: CCCCCGAAGCCCTGTGAACCACCTGCTGCCCTGTGAGGCCCCCAAAGCCCTGTGAACTGCCTGCTGTCCTGTGAACTGCCTGCTGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
3UTR-3UTR GCA 90 bp GGACGGGATGGCCGCGCGGACGGAGACCGTTTTGTAAGGTGCAGCATGGCCGGTACCTCGGTGCCGTCCTaGGCTTGGAGAGCAGAGTGG +
Preference number: 2 (lower is better)
Translates to: GRDGRADGDRFVRCSMAGTSVPS*AWRAEW
Trigger: CCACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGT...ACCGGCCATGCTGCACCTTACAAAACGGTCTCCGTCCGCGCGGCCATCCCGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
3UTR-3UTR GCA 90 bp CAAAAACTCCATGAAAAGCCGCAGCTGGAAGCCGGAGGATGGTGGACGGGATGGTCACCACCACCTCGGTaGCGTCCTGCGCTTGGAGAG +
Preference number: 2 (lower is better)
Translates to: QKLHEKPQLEAGGWWTGWSPPPR*RPALGE
Trigger: CTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGA...CCATCCCGTCCACCATCCTCCGGCTTCCAGCTGCGGCTTTTCATGGAGTTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491019.2
3UTR-3UTR GCA 90 bp AACTCCATGAAAAGCCGCAGCTGGAAGCCGGAGGATGGTGGACGGGATGGCCGCGACCGTTTTGTAAGGTaGAGCATGGCCGGTGATGAT +
Preference number: 2 (lower is better)
Translates to: NSMKSRSWKPEDGGRDGRDRFVR*SMAGDD
Trigger: ATCATCACCGGCCATGCTGCACCTTACAAAACGGTC...GCGGCCATCCCGTCCACCATCCTCCGGCTTCCAGCTGCGGCTTTTCATGGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491019.2
3UTR-3UTR CCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACAGAGGCCCCTAGGACTTaGCAGGAGCCTCAGCCTTGG +
Preference number: 2 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTEAPRT*QEPQPW
Trigger: CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTC...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
3UTR CCA 72 bp GCTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTaGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGA +
Preference number: 3 (lower is better)
Translates to: ASSRAGTEAPRT*QEPQPWGQSHG
Trigger: TCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
3UTR CCA 72 bp CTCCATGAAAAGCCGCAGCTGGAAGCCGGAGGATGGTaGACGGGATGGCCGCGCGGACGGAGACCGTTTTGT +
Preference number: 3 (lower is better)
Translates to: LHEKPQLEAGGW*TGWPRGRRPFC
Trigger: ACAAAACGGTCTCCGTCCGCGCGGCCATCCCGTCCACCATCCTCCGGCTTCCAGCTGCGGCTTTTCATGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491019.2
3UTR GCA 72 bp CGGGATGGCCGCGCGGACGGAGACCGTTTTGTAAGGTaGAGCATGGCCGGTGATGATGTCCAGGATGCTGAG +
Preference number: 3 (lower is better)
Translates to: RDGRADGDRFVR*SMAGDDVQDAE
Trigger: CTCAGCATCCTGGACATCATCACCGGCCATGCTGCACCTTACAAAACGGTCTCCGTCCGCGCGGCCATCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
3UTR CCA 72 bp AAACTCCATGAAAAGCCGCAGCTGGAAGCCGGAGGATaGTGGACGGGATGGCCGCGCGGACGGAGACCGTTT +
Preference number: 3 (lower is better)
Translates to: KLHEKPQLEAGG*WTGWPRGRRPF
Trigger: AAACGGTCTCCGTCCGCGCGGCCATCCCGTCCACCATCCTCCGGCTTCCAGCTGCGGCTTTTCATGGAGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
3UTR-3UTR CAA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAGCAGGAGCCTCAGCCTaGGGGACAGTCCCACGGAAG +
Preference number: 3 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLAGASA*GTVPRK
Trigger: CTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
3UTR-3UTR CAA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGGCAGGAGCCTCAGCCTaGGGGACAGTCCCACGGAAG +
Preference number: 3 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQAGASA*GTVPRK
Trigger: CTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
3UTR TCA 72 bp CTCACCAGAGTTTCCGGATATTTCTCAAAAACTCCATaGAAAGCCGCAGCTGGAAGCCGGAGGATGGTGGAC +
Preference number: 3 (lower is better)
Translates to: LTRVSGYFSKTP*KAAAGSRRMVD
Trigger: GTCCACCATCCTCCGGCTTCCAGCTGCGGCTTTTCATGGAGTTTTTGAGAAATATCCGGAAACTCTGGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTGCCTGGGCCCCCTTGTaGGGCCGAAGGGTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSAWAPL*GRRVRV
Trigger: GACCCTGACCCTTCGGCCCCACAAGGGGGCCCAGGC...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTGGGCAGGCTCCTCCTaGAGAAGACGCGGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSWAGSS*RRRGAG
Trigger: GCCCGCGCCGCGTCTTCTCCAGGAGGAGCCTGCCCA...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTCGGGCCGATGGCGCTaGGGGCATGCTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSSGRWR*GHAPAP
Trigger: TGGAGCTGGAGCATGCCCTCAGCGCCATCGGCCCGA...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCCAGGCGGGAGAAGTCTaGGTGTCGGTCCGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAQAGEV*VSVRGP
Trigger: CGGCCCCCGGACCGACACTCAGACTTCTCCCGCCTG...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTCTCTTCCTGGCCCGCTaGCGGGGCAGGGCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSLFLAR*RGRAVF
Trigger: GAACACTGCCCTGCCCCGGCAGCGGGCCAGGAAGAG...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGAGTCCCGAACGGCATaGACCGTGGTCGCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASESRTA*TVVARA
Trigger: GGCCCGGGCGACCACGGTGCATGCCGTTCGGGACTC...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCGAGTCCCGAACGGCATaGACCGTGGTCGCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAESRTA*TVVARA
Trigger: GGCCCGGGCGACCACGGTGCATGCCGTTCGGGACTC...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTGGGGTCCGGCTCCCTaGGCTGGAAGACGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSWGPAP*AGRRAP
Trigger: GGGAGCACGTCTTCCAGCCCAGGGAGCCGGACCCCA...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGCGCGGGGACGGAGTaGCTCCTCTTCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASGAGTE*LLFSRG
Trigger: GCCCCTGCTGAAGAGGAGCCACTCCGTCCCCGCGCC...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTCTGGTCTCCCTGCCTTaGCACCACCGTGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSLVSLP*HHRACR
Trigger: CCTGCAGGCACGGTGGTGTCAAGGCAGGGAGACCAG...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCAGGCGTTGGGACAGGTaGGGACCGCACTCGCGGGCT +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASRRWDR*GPHSRA
Trigger: AGCCCGCGAGTGCGGTCCTCACCTGTCCCAACGCCT...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGAGGCGTTGGGACAGGTaGGGACCGCACTCGCGGGCT +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWRRWDR*GPHSRA
Trigger: AGCCCGCGAGTGCGGTCCTCACCTGTCCCAACGCCT...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CGGGATGGCCGCGCGGACGGAGACCGTTTTGTAAGGTGCAGCATGGCCGGTGATCTCTTCCTGGCCCGCTaGCGGGGCAGGGCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: RDGRADGDRFVRCSMAGDLFLAR*RGRAVF
Trigger: GAACACTGCCCTGCCCCGGCAGCGGGCCAGGAAGAG...ATCACCGGCCATGCTGCACCTTACAAAACGGTCTCCGTCCGCGCGGCCATCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR GCA 90 bp TGGACGGGATGGCCGCGCGGACGGAGACCGTTTTGTAAGGTGCAGCATGGCCGGGGAGAGCAGAGTGGGTaGCGTCAGGTCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: WTGWPRGRRPFCKVQHGRGEQSG*RQVWGC
Trigger: GCAGCCCCAGACCTGACGGCACCCACTCTGCTCTCC...CCGGCCATGCTGCACCTTACAAAACGGTCTCCGTCCGCGCGGCCATCCCGTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCCTTGGTCCTCTTCCTaGCCCGCTGCCGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIPWSSS*PAAGAG
Trigger: CCCTGCCCCGGCAGCGGGCCAGGAAGAGGACCAAGG...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGAGGGCGGGGGCTCCTTaGGCTGCAGGGCCGGGTATT +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWRAGAP*AAGPGI
Trigger: AATACCCGGCCCTGCAGCCCAAGGAGCCCCCGCCCT...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCTGGGGTCCGGCTCCCTaGGCTGGAAGACGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASWGPAP*AGRRAP
Trigger: GGGAGCACGTCTTCCAGCCCAGGGAGCCGGACCCCA...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp TGGTGGACGGGATGGCCGCGCGGACGGAGACCGTTTTGTAAGGTGCAGCATGGCTGGGGTCCGGCTCCCTaGGCTGGAAGACGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: WWTGWPRGRRPFCKVQHGWGPAP*AGRRAP
Trigger: GGGAGCACGTCTTCCAGCCCAGGGAGCCGGACCCCA...GCCATGCTGCACCTTACAAAACGGTCTCCGTCCGCGCGGCCATCCCGTCCACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGCGCGGGGACGGAGTaGCTCCTCTTCAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLGAGTE*LLFSRG
Trigger: GCCCCTGCTGAAGAGGAGCCACTCCGTCCCCGCGCC...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGCCTGGGCCCCCTTGTaGGGCCGAAGGGTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLAWAPL*GRRVRV
Trigger: GACCCTGACCCTTCGGCCCCACAAGGGGGCCCAGGC...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCGTGAGCACGGCCAGCTaGCCCACCATCTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIVSTAS*PTISPG
Trigger: CCCCGGGGAGATGGTGGGCCAGCTGGCCGTGCTCAC...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTGGGAGCCCAAGCTGGTaGCCTGTCACAGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSGSPSW*PVTGPC
Trigger: GCAGGGACCTGTGACAGGCCACCAGCTTGGGCTCCC...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTGTGGGGAGCCCAAGCTaGTGGCCTGTCACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSVGSPS*WPVTGP
Trigger: GGGACCTGTGACAGGCCACCAGCTTGGGCTCCCCAC...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGTGGCGCACGCAGCGCTaGGTCCAGGGTGTGAGCGTG +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWWRTQR*VQGVSV
Trigger: CACGCTCACACCCTGGACCCAGCGCTGCGTGCGCCA...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGGCCGCCCCCGTGATCTaGGTCACAGGACTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWAAPVI*VTGLLE
Trigger: CTCCAGGAGTCCTGTGACTCAGATCACGGGGGCGGC...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCTCTCCCCGGGGCGCGTaGGGAACAAGCAGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASSPRGA*GTSRCP
Trigger: AGGACACCTGCTTGTTCCTCACGCGCCCCGGGGAGA...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTCCACCGTGGACAGGTTaGCAGCCGGGTTCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSPPWTG*QPGSPS
Trigger: ACTTGGGGAACCCGGCTGTCAACCTGTCCACGGTGG...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCCCAGGGCGAAGGCGGTaGGGGGCACTTCCTCTGACA +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAPGRRR*GALPLT
Trigger: TGTCAGAGGAAGTGCCCCTCACCGCCTTCGCCCTGG...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGCTGGGTCCAGGGTGTaGGCGTGCCATCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASAGSRV*ACHLPG
Trigger: ACCAGGCAGATGGCACGCTCACACCCTGGACCCAGC...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGGGCTCCTTGGGCTaGAGGGCCGGGTATTCCTTC +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASGGSLG*RAGYSF
Trigger: GAAGGAATACCCGGCCCTGCAGCCCAAGGAGCCCCC...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp TCCCGCCAGAACCTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTGGAGAGCGGGGGCTCCTTGGGCTaGAGGGCCGGGTATTCCTTC +
Preference number: 4 (lower is better)
Translates to: SRQNLFHHHLGAVLRLESGGSLG*RAGYSF
Trigger: GAAGGAATACCCGGCCCTGCAGCCCAAGGAGCCCCC...GCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTGGCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR GCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCCCTGCACCACACAGATaGTGGGGTCCGGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAPAPHR*WGPAPW
Trigger: CCAGGGAGCCGGACCCCAGCATCTGTGTGGTGCAGG...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGTCCAGCCGCCCGTCCTaGACCACACAGATGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWSSRPS*TTQMLG
Trigger: CCCCAGCATCTGTGTGGTGCAGGACGGGCGGCTGGA...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCGGGTGCTCGTCCGAGTaGAGGAAGACCCTGGCACGG +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAGCSSE*RKTLAR
Trigger: CCGTGCCAGGGTCTTCCTGCACTCGGACGAGCACCC...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTGGACGTGAGGGCTCCTaGCGGCAGCTTGGCCAATTC +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSGREGS*RQLGQF
Trigger: GAATTGGCCAAGCTGCCGGCAGGAGCCCTCACGTCC...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTCCAAGTCCCACTTGCTaGCCTCCGTGGGGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSPSPTC*PPWGAQ
Trigger: TTGGGCTCCCCACGGAGGGCAGCAAGTGGGACTTGG...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCTGGGTGTCCTCCTGCTaGCCCAGCCAGCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAWVSSC*PSQLDS
Trigger: GCTGTCCAGCTGGCTGGGGCAGCAGGAGGACACCCA...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTGGGCCCTCCTCCCTGTaGAGCAGGATCAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSGPSSL*SRISCF
Trigger: GAAGCAGCTGATCCTGCTGCACAGGGAGGAGGGCCC...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCCTGGGCACAGCCTCTTaGTCCCCCTCCCCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEALGTAS*SPSPKH
Trigger: GTGCTTGGGGGAGGGGGAGCAAGAGGCTGTGCCCAG...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCACTCGCGGGCTTCTTaGTCGGCCCCTGCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIHSRAS*SAPAGR
Trigger: GCGACCAGCAGGGGCCGAGCAAGAAGCCCGCGAGTG...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGCACAGTCCCCAAGAGTaGAGGGCGGTGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWHSPQE*RAVPRQ
Trigger: CTGCCTGGGCACCGCCCTGCACTCTTGGGGACTGTG...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406427.6
CDS-3UTR CCA 90 bp AACTCCATGAAAAGCCGCAGCTGGAAGCCGGAGGATGGTGGACGGGATGGCCGCAGGGCGGGGGCTCCTTaGGCTGCAGGGCCGGGTATT +
Preference number: 4 (lower is better)
Translates to: NSMKSRSWKPEDGGRDGRRAGAP*AAGPGI
Trigger: AATACCCGGCCCTGCAGCCCAAGGAGCCCCCGCCCT...GCGGCCATCCCGTCCACCATCCTCCGGCTTCCAGCTGCGGCTTTTCATGGAGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGGCACCACACAGATGCTaGGGTCCGGCTCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWAPHRC*GPAPWA
Trigger: AGCCCAGGGAGCCGGACCCCAGCATCTGTGTGGTGC...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTGGAGAGCAGAGTGGGTGCCGCACCACACAGATGCTaGGGTCCGGCTCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LFHHHLGAVLRLESRVGAAPHRC*GPAPWA
Trigger: AGCCCAGGGAGCCGGACCCCAGCATCTGTGTGGTGC...GGCACCCACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCAGAAGTGGCACTGCCTaGGCCCCCTTGTGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASRSGTA*APLWGR
Trigger: TCGGCCCCACAAGGGGGCCCAGGCAGTGCCACTTCT...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGTCGCCCGGGCCTGGTaGGTCAGTGTCTCCACCACG +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLVARAW*VSVSTT
Trigger: CGTGGTGGAGACACTGACCCACCAGGCCCGGGCGAC...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGTGGTCGCCCGGGCCTaGTGGGTCAGTGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLVVARA*WVSVST
Trigger: GGTGGAGACACTGACCCACCAGGCCCGGGCGACCAC...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCGGGAGCCCAAGCTGGTaGCCTGTCACAGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAGSPSW*PVTGPC
Trigger: GCAGGGACCTGTGACAGGCCACCAGCTTGGGCTCCC...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGTGGGGAGCCCAAGCTaGTGGCCTGTCACAGGTCCC +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASVGSPS*WPVTGP
Trigger: GGGACCTGTGACAGGCCACCAGCTTGGGCTCCCCAC...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTTGGCGCACGCAGCGCTaGGTCCAGGGTGTGAGCGTG +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLWRTQR*VQGVSV
Trigger: CACGCTCACACCCTGGACCCAGCGCTGCGTGCGCCA...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTCCACCATGGCGGGCTTaGCGGGCTCAATGCGAGACA +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSPPWRA*RAQCET
Trigger: TGTCTCGCATTGAGCCCGCCAAGCCCGCCATGGTGG...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGTCACGTCAAACTCCGTaGGGTCGGCCTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWSRQTP*GRPPAG
Trigger: CCCTGCTGGAGGCCGACCTCACGGAGTTTGACGTGA...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCGCCGCCCCCGTGATCTaGGTCACAGGACTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIAAPVI*VTGLLE
Trigger: CTCCAGGAGTCCTGTGACTCAGATCACGGGGGCGGC...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGAGGGGCACTTCCTCTaGCACGGGCATCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASEGHFL*HGHHCH
Trigger: GTGGCAGTGATGCCCGTGTCAGAGGAAGTGCCCCTC...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCGACAGCCGGTACTCGTaGACACTGTCCAGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEADSRYS*TLSRAA
Trigger: CGCTGCCCTGGACAGTGTTCACGAGTACCGGCTGTC...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCGCTGGGTCCAGGGTGTaGGCGTGCCATCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIAGSRV*ACHLPG
Trigger: ACCAGGCAGATGGCACGCTCACACCCTGGACCCAGC...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTACTCCGCCAAGGCCTTaGGAACGCCCACCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLTPPRP*ERPPGH
Trigger: GTGCCCAGGTGGGCGTTCTCAAGGCCTTGGCGGAGT...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCACTCCGCCAAGGCCTTaGGAACGCCCACCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCITPPRP*ERPPGH
Trigger: GTGCCCAGGTGGGCGTTCTCAAGGCCTTGGCGGAGT...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCGGGGGCTCCTTGGGCTaGAGGGCCGGGTATTCCTTC +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIGGSLG*RAGYSF
Trigger: GAAGGAATACCCGGCCCTGCAGCCCAAGGAGCCCCC...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCCTGGGCTGGAAGACGTaGTCCCCTTCCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASLGWKT*SPSCSC
Trigger: GCAGCTGCAGGAAGGGGAGCACGTCTTCCAGCCCAG...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCCTGGGCTGGAAGACGTaGTCCCCTTCCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEALGWKT*SPSCSC
Trigger: GCAGCTGCAGGAAGGGGAGCACGTCTTCCAGCCCAG...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACGCTGTCTCCCGCCAGAACCTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTCTGGGCTGGAAGACGTaGTCCCCTTCCTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TLSPARTSFTTTSVPSCALGWKT*SPSCSC
Trigger: GCAGCTGCAGGAAGGGGAGCACGTCTTCCAGCCCAG...AGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTGGCGGGAGACAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR GCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCTCCAGCCGCCCGTCCTaGACCACACAGATGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCISSRPS*TTQMLG
Trigger: CCCCAGCATCTGTGTGGTGCAGGACGGGCGGCTGGA...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp TGTCTCCCGCCAGAACCTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTGGATCCAGCCGCCCGTCCTaGACCACACAGATGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CLPPEPLSPPPRCRPALGSSRPS*TTQMLG
Trigger: CCCCAGCATCTGTGTGGTGCAGGACGGGCGGCTGGA...TCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTGGCGGGAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR GCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCGATCAGAAGTGGCACTaGCTGGGCCCCCTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEADQKWH*LGPLVG
Trigger: CCCCACAAGGGGGCCCAGGCAGTGCCACTTCTGATC...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCGGGTGCTCGTCCGAGTaGAGGAAGACCCTGGCACGG +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIGCSSE*RKTLAR
Trigger: CCGTGCCAGGGTCTTCCTGCACTCGGACGAGCACCC...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGTGCCTGCAGGAACGTaGAGAAGCGCCACCCGGCCA +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLVPAGT*RSATRP
Trigger: TGGCCGGGTGGCGCTTCTGCACGTTCCTGCAGGCAC...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCGCGTCCTGGTCTCCCTaGCTTGACACCACCGTGCCT +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAASWSP*LDTTVP
Trigger: AGGCACGGTGGTGTCAAGGCAGGGAGACCAGGACGC...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCTTCCGCTGGTACACGTaGAGCAGCCCCGAGACCACG +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASFRWYT*SSPETT
Trigger: CGTGGTCTCGGGGCTGCTGCACGTGTACCAGCGGAA...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTGTCCCTGCTGGAGGCTaGCCAGGATCTTCTCACCCA +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSVPAGG*PGSSHP
Trigger: TGGGTGAGAAGATCCTGGGCAGCCTCCAGCAGGGAC...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTTCCCCAAGTCCCACTTaGTGCCCTCCGTGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLSPSPT*CPPWGA
Trigger: GGCTCCCCACGGAGGGCAGCAAGTGGGACTTGGGGA...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCTGGGTGTCCTCCTGCTaGCCCAGCCAGCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIWVSSC*PSQLDS
Trigger: GCTGTCCAGCTGGCTGGGGCAGCAGGAGGACACCCA...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTCTGGGCACAGCCTCTTaGTCCCCCTCCCCCAAGCAC +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLLGTAS*SPSPKH
Trigger: GTGCTTGGGGGAGGGGGAGCAAGAGGCTGTGCCCAG...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCCCATGTCCACAGGGATaGCGCACTCCGCCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASPCPQG*RTPPRP
Trigger: AGGCCTTGGCGGAGTGCGGCATCCCTGTGGACATGG...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCAGGCCCCGATGGACGTaGCTCCCACCATGTCCACAG +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEARPRWT*LPPCPQ
Trigger: CTGTGGACATGGTGGGAGGCACGTCCATCGGGGCCT...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCAGGCCCCGATGGACGTaGCTCCCACCATGTCCACAG +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASRPRWT*LPPCPQ
Trigger: CTGTGGACATGGTGGGAGGCACGTCCATCGGGGCCT...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGCGATCACCACTTTTaGCCCCATGGACCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASGDHHF*PHGPGH
Trigger: GTGGCCCGGTCCATGGGGGCAAAAGTGGTGATCGCC...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTCCAAGTCTGAGCCCTaGTGGGCTGAGGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSSKSEP*WAEVLW
Trigger: CCAGAGCACCTCAGCCCAGCAGGGCTCAGACTTGGA...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACGCTGTCTCCCGCCAGAACCTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTGCACAGTGTCCTGGATaGAGACCTCCAGCCGCCCGT +
Preference number: 4 (lower is better)
Translates to: TLSPARTSFTTTSVPSCAAQCPG*RPPAAR
Trigger: ACGGGCGGCTGGAGGTCTGCATCCAGGACACTGTGC...AGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTGGCGGGAGACAGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR GCA 90 bp CTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTGGAGAGCAGAGTGGGTGCCACCTCGGTGCCGTCCTaGGCTTGGAGAGCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LFHHHLGAVLRLESRVGATSVPS*AWRAEW
Trigger: CCACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGT...GGCACCCACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGTGCCGTCAGTGTCCTaGATGCAGACCTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASVPSVS*MQTSSR
Trigger: GCGGCTGGAGGTCTGCATCCAGGACACTGACGGCAC...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCCCACGAACAGGATGCTaGCGTCCTGGTCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAPRTGC*RPGLPA
Trigger: GGCAGGGAGACCAGGACGCCAGCATCCTGTTCGTGG...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGCCACGAACAGGATGCTaGCGTCCTGGTCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWPRTGC*RPGLPA
Trigger: GGCAGGGAGACCAGGACGCCAGCATCCTGTTCGTGG...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGCAAGCACCAGGGCAATaGCGTTGCCCGTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWQAPGQ*RCPSAP
Trigger: GGGTGCTGACGGGCAACGCCATTGCCCTGGTGCTTG...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCCCACGAAGGCCCCGATaGACGTGCCTCCCACCATGT +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASPRRPR*TCLPPC
Trigger: ACATGGTGGGAGGCACGTCCATCGGGGCCTTCGTGG...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTCGGACAGGGACATGCTaGCACGCACGTACCACCACA +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSRTGTC*HARTTT
Trigger: TGTGGTGGTACGTGCGTGCCAGCATGTCCCTGTCCG...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGCCACTTTTGCCCCCATaGACCGGGCCACATCCGCTG +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWPLLPP*TGPHPL
Trigger: CAGCGGATGTGGCCCGGTCCATGGGGGCAAAAGTGG...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCAACCCTAACACAGCCTaGGGCCCCGGGGAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASNPNTA*GPGEVR
Trigger: CCTGACTTCCCCGGGGCCCCAGGCTGTGTTAGGGTT...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGAACCCTAACACAGCCTaGGGCCCCGGGGAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWNPNTA*GPGEVR
Trigger: CCTGACTTCCCCGGGGCCCCAGGCTGTGTTAGGGTT...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CGGGATGGCCGCGCGGACGGAGACCGTTTTGTAAGGTGCAGCATGGCCGGTGATGCTTGGAGAGCAGAGTaGGTGCCGTCAGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: RDGRADGDRFVRCSMAGDAWRAE*VPSGLG
Trigger: CCCCAGACCTGACGGCACCCACTCTGCTCTCCAAGC...ATCACCGGCCATGCTGCACCTTACAAAACGGTCTCCGTCCGCGCGGCCATCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR TCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTCCGGAACCGGTACTaGGGAGTGGGCTGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSFRNRY*GVGCAC
Trigger: ACAAGCACAGCCCACTCCTCAGTACCGGTTCCGGAA...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GGACGGGATGGCCGCGCGGACGGAGACCGTTTTGTAAGGTGCAGCATGGCCGGTTTCCGGAACCGGTACTaGGGAGTGGGCTGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: GRDGRADGDRFVRCSMAGFRNRY*GVGCAC
Trigger: ACAAGCACAGCCCACTCCTCAGTACCGGTTCCGGAA...ACCGGCCATGCTGCACCTTACAAAACGGTCTCCGTCCGCGCGGCCATCCCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR TCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTTCACGTCAAACTCCGTaGGGTCGGCCTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLSRQTP*GRPPAG
Trigger: CCCTGCTGGAGGCCGACCTCACGGAGTTTGACGTGA...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp TGTCTCCCGCCAGAACCTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTGGATCACGTCAAACTCCGTaGGGTCGGCCTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: CLPPEPLSPPPRCRPALGSRQTP*GRPPAG
Trigger: CCCTGCTGGAGGCCGACCTCACGGAGTTTGACGTGA...TCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTGGCGGGAGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR TCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCCCTGGCTCTCAGCGTTaGAGAGCTCTGTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAPGSQR*RALWSG
Trigger: GCCTGACCACAGAGCTCTTCAACGCTGAGAGCCAGG...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTATCCGTGTGACTCTCTaGGTGCTGGGAGACCGTGGA +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSIRVTL*VLGDRG
Trigger: TCCACGGTCTCCCAGCACTCAGAGAGTCACACGGAT...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTCCAGCTTCATCAGGGTaGGCAGGTCCTTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSPASSG*AGPSWQ
Trigger: CTGCCAAGAAGGACCTGCTCACCCTGATGAAGCTGG...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTCAGCTTGGCCAATTCTaGGTCCCGAACGGCATGCAC +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSQLGQF*VPNGMH
Trigger: GTGCATGCCGTTCGGGACTCAGAATTGGCCAAGCTG...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCCCGCTGGGAGGTTGTTaGTGTAGCCCCCGTCCATCA +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASPLGGC*CSPRPS
Trigger: TGATGGACGGGGGCTACATCAACAACCTCCCAGCGG...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCTTTCGGCAAGGTCCGTaGAGGAGGCGTTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASFRQGP*RRRWDR
Trigger: CCTGTCCCAACGCCTCCTTCACGGACCTTGCCGAAA...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGTTTCGGCAAGGTCCGTaGAGGAGGCGTTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWFRQGP*RRRWDR
Trigger: CCTGTCCCAACGCCTCCTTCACGGACCTTGCCGAAA...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTCGTCAGTGTCCTGGATaGAGACCTCCAGCCGCCCGT +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLRQCPG*RPPAAR
Trigger: ACGGGCGGCTGGAGGTCTGCATCCAGGACACTGACG...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGTCACCACCACCTCGGTaGCGTCAGTGTCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWSPPPR*RQCPGC
Trigger: GCATCCAGGACACTGACGGCACCGAGGTGGTGGTGA...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGATCAGAAGTGGCACTaGCTGGGCCCCCTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLDQKWH*LGPLVG
Trigger: CCCCACAAGGGGGCCCAGGCAGTGCCACTTCTGATC...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGCGTCCTGGTCTCCCTaGCTTGACACCACCGTGCCT +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLASWSP*LDTTVP
Trigger: AGGCACGGTGGTGTCAAGGCAGGGAGACCAGGACGC...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTAGACCACGAACAGGATaGTGGCGTCCTGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSRPRTG*WRPGLP
Trigger: AGGGAGACCAGGACGCCAGCATCCTGTTCGTGGTCT...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCCTCTTCACCACAGTGTaGGCCACACCCAGGACGACG +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEALFTTV*ATPRTT
Trigger: CGTCGTCCTGGGTGTGGCGCACACTGTGGTGAAGAG...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCCCCTGCCTGTATATTaGTCGCCCGGCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIPLPVY*SPGLHL
Trigger: GAGGTGGAGGCCGGGCGAGCAATATACAGGCAGGGG...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTCCTGTCACAGGTCCCTaGTGGAGGCTGCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLPVTGP*WRLPRI
Trigger: GATCCTGGGCAGCCTCCAGCAGGGACCTGTGACAGG...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCATGGCGCTGAGGGCATaGTCCAGCTCCAGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIMALRA*SSSRAK
Trigger: CTTCGCCCTGGAGCTGGAGCATGCCCTCAGCGCCAT...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGTTCTTGCTCGGCCCCTaGTGGTCGCGGAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWFLLGP*WSRSIF
Trigger: GAAGATGCTCCGCGACCAGCAGGGGCCGAGCAAGAA...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTGGTGCTCTGGAAGTCTaGGTATGCATCCCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSGALEV*VCIPGD
Trigger: GTCCCCAGGGATGCATACGCAGACTTCCAGAGCACC...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTCCTGCTGGGCTGAGGTaGTCTGGAAGTCTGCGTATG +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSPAGLR*SGSLRM
Trigger: CATACGCAGACTTCCAGAGCACCTCAGCCCAGCAGG...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCAGACTGGGGTGTCGATaGCGCAGTGAGGACTCGTCC +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASRLGCR*RSEDSS
Trigger: GGACGAGTCCTCACTGCGGCATCGACACCCCAGTCT...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACCTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTGGAGAGCAGAGTGGGTGTCACCACCACCTCGGTaGCGTCCTGCGCTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: TSFTTTSVPSCAWRAEWVSPPPR*RPALGE
Trigger: CTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGA...CACCCACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CCA 90 bp GCGGACGGAGACCGTTTTGTAAGGTGCAGCATGGCCGGTGATGATGTCCAGGATCCTTGGTCCTCTTCCTaGCCCGCTGCCGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ADGDRFVRCSMAGDDVQDPWSSS*PAAGAG
Trigger: CCCTGCCCCGGCAGCGGGCCAGGAAGAGGACCAAGG...ATCCTGGACATCATCACCGGCCATGCTGCACCTTACAAAACGGTCTCCGTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCATGCTGAGCAGGCTGTaGACGCTGTCTCCCGCCAGA +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAMLSRL*TLSPAR
Trigger: TCTGGCGGGAGACAGCGTCCACAGCCTGCTCAGCAT...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTACGAGAGGGATGGCCTaGCTCTCAGCGTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSTRGMA*LSALKS
Trigger: GCTCTTCAACGCTGAGAGCCAGGCCATCCCTCTCGT...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTCATCCGACTTCCTGCTaGCCAGGGTCTCATCCGTGT +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSHPTSC*PGSHPC
Trigger: ACACGGATGAGACCCTGGCCAGCAGGAAGTCGGATG...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCAGGATGCTGGCGTCCTaGTCTCCCTGCCTTGACACC +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASRMLAS*SPCLDT
Trigger: GGTGTCAAGGCAGGGAGACCAGGACGCCAGCATCCT...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGAGGATGCTGGCGTCCTaGTCTCCCTGCCTTGACACC +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWRMLAS*SPCLDT
Trigger: GGTGTCAAGGCAGGGAGACCAGGACGCCAGCATCCT...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAGAACGGCATGCACCGTaGTCGCCCGGGCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLERHAP*SPGPGG
Trigger: CCCACCAGGCCCGGGCGACCACGGTGCATGCCGTTC...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCGCTGCCCCAGCCAGCTaGACAGCCGGTACTCGTGAA +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIAAPAS*TAGTRE
Trigger: TTCACGAGTACCGGCTGTCCAGCTGGCTGGGGCAGC...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTAGGATCAGCTGCTTCTaGGCACGCACAGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSRISCF*ARTAVL
Trigger: GAGCACAGCTGTGCGTGCCCAGAAGCAGCTGATCCT...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTATGGGCAGGCTCCTCCTaGAGAAGACGCGGCGCGGGC +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLWAGSS*RRRGAG
Trigger: GCCCGCGCCGCGTCTTCTCCAGGAGGAGCCTGCCCA...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTCAAGCACCAGGGCAATaGCGTTGCCCGTCAGCACCC +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLQAPGQ*RCPSAP
Trigger: GGGTGCTGACGGGCAACGCCATTGCCCTGGTGCTTG...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCCACGAAGGCCCCGATaGACGTGCCTCCCACCATGT +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIPRRPR*TCLPPC
Trigger: ACATGGTGGGAGGCACGTCCATCGGGGCCTTCGTGG...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCCCGGGCCACATCCGCTaGGAGGTTGTTGATGTAGCC +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASPGHIR*EVVDVA
Trigger: GGCTACATCAACAACCTCCCAGCGGATGTGGCCCGG...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCCACTTTTGCCCCCATaGACCGGGCCACATCCGCTG +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIPLLPP*TGPHPL
Trigger: CAGCGGATGTGGCCCGGTCCATGGGGGCAAAAGTGG...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTATTCGTCATCCACCATaGCGGGCTTGGCGGGCTCAA +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSIRHPP*RAWRAQ
Trigger: TTGAGCCCGCCAAGCCCGCCATGGTGGATGACGAAT...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCCAGGAGCCTCAGCCTTaGGGACAGTCCCACGGAAGA +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAQEPQP*GQSHGR
Trigger: TCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTG...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCGAGGCCCCTAGGACTTaGCAGGAGCCTCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIEAPRT*QEPQPW
Trigger: CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTC...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGAGGCCCCTAGGACTTaGCAGGAGCCTCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLEAPRT*QEPQPW
Trigger: CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTC...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCAGGGTCTCATCCGTGTaGCTCTCTGAGTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEARVSSV*LSECWE
Trigger: CTCCCAGCACTCAGAGAGTCACACGGATGAGACCCT...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCCAGCTTGGCCAATTCTaGGTCCCGAACGGCATGCAC +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAQLGQF*VPNGMH
Trigger: GTGCATGCCGTTCGGGACTCAGAATTGGCCAAGCTG...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGCATCCCCATAGTTGGTaGGGTCCGTCTCATCTCGGC +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWHPHSW*GPSHLG
Trigger: GCCGAGATGAGACGGACCTCACCAACTATGGGGATG...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTCTTCGCAGATCTCGTTaGACTTGCCGAAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSLRRSR*TCRSPG
Trigger: CCCTGGACTTCGGCAAGTTCAACGAGATCTGCGAAG...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTACTCTTCCTGGCCCGCTaGCGGGGCAGGGCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLLFLAR*RGRAVF
Trigger: GAACACTGCCCTGCCCCGGCAGCGGGCCAGGAAGAG...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCTCACCACCACCTCGGTaGCGTCAGTGTCCTGGATGC +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCISPPPR*RQCPGC
Trigger: GCATCCAGGACACTGACGGCACCGAGGTGGTGGTGA...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTCCTGGCACGGTCACATaGCATCCCCAGATCAGAAGT +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSPGTVT*HPQIRS
Trigger: ACTTCTGATCTGGGGATGGCATGTGACCGTGCCAGG...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTTGGCATCCGACTTCCTaGTGGCCAGGGTCTCATCCG +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLWHPTS*WPGSHP
Trigger: CGGATGAGACCCTGGCCAGCAGGAAGTCGGATGCCA...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCAGGTGTCCTCCTGGCTaGCGATCTTCCGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASRCPPG*RSSAGT
Trigger: TGTACCAGCGGAAGATCGGCAGCCAGGAGGACACCT...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCGTCCCTGCTGGAGGCTaGCCAGGATCTTCTCACCCA +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIVPAGG*PGSSHP
Trigger: TGGGTGAGAAGATCCTGGGCAGCCTCCAGCAGGGAC...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCTGCAGCAGGATCAGCTaGTTCTGGGCACGCACAGCT +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASCSRIS*FWARTA
Trigger: AGCTGTGCGTGCCCAGAAGCAGCTGATCCTGCTGCA...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCAACCGGACAGGGACATaGTGGCACGCACGTACCACC +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCINRTGT*WHARTT
Trigger: GGTGGTACGTGCGTGCCAGCATGTCCCTGTCCGGTT...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCTCTCCAGCACGCCGCTaGGGCCCCAGATGTCAAACA +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCISPARR*GPRCQT
Trigger: TGTTTGACATCTGGGGCCGCAGCGGCGTGCTGGAGA...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTTTCTTGCTCGGCCCCTaGTGGTCGCGGAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLFLLGP*WSRSIF
Trigger: GAAGATGCTCCGCGACCAGCAGGGGCCGAGCAAGAA...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGCTGGAAGTCTGCGTATaGATCCCTGGGGACGTCCAG +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWLEVCV*IPGDVQ
Trigger: CTGGACGTCCCCAGGGATGCATACGCAGACTTCCAG...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCCTGGAAGTCTGCGTATaGATCCCTGGGGACGTCCAG +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEALEVCV*IPGDVQ
Trigger: CTGGACGTCCCCAGGGATGCATACGCAGACTTCCAG...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCCCTGCTGGGCTGAGGTaGTCTGGAAGTCTGCGTATG +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAPAGLR*SGSLRM
Trigger: CATACGCAGACTTCCAGAGCACCTCAGCCCAGCAGG...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCTCCAAGTCTGAGCCCTaGTGGGCTGAGGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCISKSEP*WAEVLW
Trigger: CCAGAGCACCTCAGCCCAGCAGGGCTCAGACTTGGA...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCAGACTGGGGTGTCGATaGCGCAGTGAGGACTCGTCC +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIRLGCR*RSEDSS
Trigger: GGACGAGTCCTCACTGCGGCATCGACACCCCAGTCT...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTAAGAGTGCAGGGCGGTaGCCAGGCAGAAGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLKSAGR*PGRSQP
Trigger: AGGCTGACTTCTGCCTGGGCACCGCCCTGCACTCTT...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406427.6
CDS-3UTR GCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGCAGGAGGGCTCCAACTaGAATCCCCGTCAGCATGGT +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWQEGSN*NPRQHG
Trigger: ACCATGCTGACGGGGATTGCAGTTGGAGCCCTCCTG...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406427.6
CDS-3UTR CCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGCCTTGGTCCTCTTCCTaGCCCGCTGCCGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQPWSSS*PAAGAG
Trigger: CCCTGCCCCGGCAGCGGGCCAGGAAGAGGACCAAGG...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAAGGGCGGGGGCTCCTTaGGCTGCAGGGCCGGGTATT +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLRAGAP*AAGPGI
Trigger: AATACCCGGCCCTGCAGCCCAAGGAGCCCCCGCCCT...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCATGCTGAGCAGGCTGTaGACGCTGTCTCCCGCCAGA +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIMLSRL*TLSPAR
Trigger: TCTGGCGGGAGACAGCGTCCACAGCCTGCTCAGCAT...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACCTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTGGAGAGCAGAGTGGGTGATGCTGAGCAGGCTGTaGACGCTGTCTCCCGCCAGA +
Preference number: 4 (lower is better)
Translates to: TSFTTTSVPSCAWRAEWVMLSRL*TLSPAR
Trigger: TCTGGCGGGAGACAGCGTCCACAGCCTGCTCAGCAT...CACCCACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTTCCCGGCAGCCACACTaGCTACAGACACGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLSRQPH*LQTREG
Trigger: TCCCTCTCGTGTCTGTAGCCAGTGTGGCTGCCGGGA...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCAGAACACCTGCTTCTTaGCCTTCCCGGCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEARTPAS*PSRQPH
Trigger: GTGTGGCTGCCGGGAAGGCCAAGAAGCAGGTGTTCT...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCTTTTCCTGGACTTGCTaGCCACGGAGCTCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIFSWTC*PRSSRG
Trigger: ACCCCGGGAGCTCCGTGGCCAGCAAGTCCAGGAAAA...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCAAGCAGGTGTCCTCCTaGCTGCCGATCTTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIKQVSS*LPIFRW
Trigger: CCAGCGGAAGATCGGCAGCCAGGAGGACACCTGCTT...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAGTCGCCCGGGCCTGGTaGGTCAGTGTCTCCACCACG +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLVARAW*VSVSTT
Trigger: CGTGGTGGAGACACTGACCCACCAGGCCCGGGCGAC...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGGAACGGCATGCACCGTaGTCGCCCGGGCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQERHAP*SPGPGG
Trigger: CCCACCAGGCCCGGGCGACCACGGTGCATGCCGTTC...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTCGGTCCGGGGGCCGCTaGAAGACATGCTTGTACATC +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLRSGGR*KTCLYI
Trigger: GATGTACAAGCATGTCTTCCAGCGGCCCCCGGACCG...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCTTGAGAACGCCCACCTaGGCACAGCCTCTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCILRTPT*AQPLAP
Trigger: GGGAGCAAGAGGCTGTGCCCAGGTGGGCGTTCTCAA...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGACAGGGACATGCTaGCACGCACGTACCACCACA +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIRTGTC*HARTTT
Trigger: TGTGGTGGTACGTGCGTGCCAGCATGTCCCTGTCCG...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTCTGCGTATGCATCCCTaGGGACGTCCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLLRMHP*GRPAAP
Trigger: AGGAGCTGCTGGACGTCCCCAGGGATGCATACGCAG...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCAAGTCTGAGCCCTGCTaGGCTGAGGTGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAKSEPC*AEVLWK
Trigger: CTTCCAGAGCACCTCAGCCCAGCAGGGCTCAGACTT...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTGCCCTCAGACAGTTTTaGGAAAGCCAGACTGGGGTG +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSALRQF*ESQTGV
Trigger: CACCCCAGTCTGGCTTTCCCAAAACTGTCTGAGGGC...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTGAAAAGCAGACAGCCTaGAGCAAACAAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSEKQTA*SKQGHT
Trigger: GGTGTGCCCTTGTTTGCTTCAGGCTGTCTGCTTTTC...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCATCCGTGTGACTCTCTaGGTGCTGGGAGACCGTGGA +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIIRVTL*VLGDRG
Trigger: TCCACGGTCTCCCAGCACTCAGAGAGTCACACGGAT...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGCCTTCTTGGCAGCTCTaGAGATGGCATCCGACTTCC +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWPSWQL*RWHPTS
Trigger: GGAAGTCGGATGCCATCTTCAGAGCTGCCAAGAAGG...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTCCAGCTTCATCAGGGTaGGCAGGTCCTTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLPASSG*AGPSWQ
Trigger: CTGCCAAGAAGGACCTGCTCACCCTGATGAAGCTGG...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTATCTCCCCGGGGCGCGTaGGGAACAAGCAGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLSPRGA*GTSRCP
Trigger: AGGACACCTGCTTGTTCCTCACGCGCCCCGGGGAGA...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTACCAGGGCGAAGGCGGTaGGGGGCACTTCCTCTGACA +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLPGRRR*GALPLT
Trigger: TGTCAGAGGAAGTGCCCCTCACCGCCTTCGCCCTGG...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTCATCCCCATAGTTGGTaGGGTCCGTCTCATCTCGGC +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLHPHSW*GPSHLG
Trigger: GCCGAGATGAGACGGACCTCACCAACTATGGGGATG...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGTGAACCTTCCTCCGTaGACCACAGTCCCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASVNLPP*TTVPKS
Trigger: ACTCTTGGGGACTGTGGTTCACGGAGGAAGGTTCAC...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406427.6
CDS-3UTR TCA 90 bp GCGGACGGAGACCGTTTTGTAAGGTGCAGCATGGCCGGTGATGATGTCCAGGATACGGGCCTGCACCTCTaGGGCGCCATGAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ADGDRFVRCSMAGDDVQDTGLHL*GAMRAA
Trigger: TGCTGCTCTCATGGCGCCTCAGAGGTGCAGGCCCGT...ATCCTGGACATCATCACCGGCCATGCTGCACCTTACAAAACGGTCTCCGTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR GCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAAGGGTCAGGGTCACCTaGCCCGGGCTTCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLRVRVT*PGLLQL
Trigger: GAGCTGGAGAAGCCCGGGGCAGGTGACCCTGACCCT...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGCCTGGCACGGTCACATaGCATCCCCAGATCAGAAGT +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWPGTVT*HPQIRS
Trigger: ACTTCTGATCTGGGGATGGCATGTGACCGTGCCAGG...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAACGGAGCTCCCGGGGTaGTCGTCCGAGTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLTELPG*SSECRK
Trigger: CTTCCTGCACTCGGACGAGCACCCCGGGAGCTCCGT...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCGCCTTGACACCACCGTaGCTGCAGGAACGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIALTPP*LQERAE
Trigger: TTCTGCACGTTCCTGCAGGCACGGTGGTGTCAAGGC...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGCCTTGACACCACCGTaGCTGCAGGAACGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLALTPP*LQERAE
Trigger: TTCTGCACGTTCCTGCAGGCACGGTGGTGTCAAGGC...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTAGACCACGAACAGGATaGTGGCGTCCTGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLRPRTG*WRPGLP
Trigger: AGGGAGACCAGGACGCCAGCATCCTGTTCGTGGTCT...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTTCATCAAGGACGTCATaGCCTCGGCCCACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLSSRTS*PRPTAW
Trigger: CCAAGCAGTGGGCCGAGGGCATGACGTCCTTGATGA...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCCACAGGTCCTCGATCTaGTGGTCCTTGAAGACGCTG +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASHRSSI*WSLKTL
Trigger: CAGCGTCTTCAAGGACCAGCAGATCGAGGACCTGTG...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCAGATGTCAAACACCGTaGGCCCGTGCTGGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIRCQTP*ARAGSP
Trigger: TGGGCTACCAGCACGGGCGCACGGTGTTTGACATCT...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTGCTTGGCGGGCTCAATaGGAGACACAATTTCGGCAA +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSAWRAQ*ETQFRQ
Trigger: TTGCCGAAATTGTGTCTCGCATTGAGCCCGCCAAGC...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTGCTCATGCTCACACCTaGACACTTTTCCCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSAHAHT*TLFPGF
Trigger: GAACCCAGGGAAAAGTGTCCAGGTGTGAGCATGAGC...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCTCTCCACAAGGGTGTTaGGGAGTGTGGTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASSPQGC*GVWSPS
Trigger: GGAAGGTGACCACACTCCCCAACACCCTTGTGGAGA...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CGCTGTCTCCCGCCAGAACCTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTTCTCCACAAGGGTGTTaGGGAGTGTGGTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: RCLPPEPLSPPPRCRPALSPQGC*GVWSPS
Trigger: GGAAGGTGACCACACTCCCCAACACCCTTGTGGAGA...AAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTGGCGGGAGACAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCAGCGGCTTCTCAAAGTaGCCCAGGACCCGAACGTTT +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASSGFSK*PRTRTF
Trigger: AAACGTTCGGGTCCTGGGCCACTTTGAGAAGCCGCT...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAGCACCACACAGATGCTaGGGTCCGGCTCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLAPHRC*GPAPWA
Trigger: AGCCCAGGGAGCCGGACCCCAGCATCTGTGTGGTGC...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCACGAGAGGGATGGCCTaGCTCTCAGCGTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCITRGMA*LSALKS
Trigger: GCTCTTCAACGCTGAGAGCCAGGCCATCCCTCTCGT...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTCTCCTGGAGCCGCGGTaGCTTTTTAAGCCGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLLLEPR*LFKPLF
Trigger: GAAGAGCGGCTTAAAAAGCCACCGCGGCTCCAGGAG...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGGAGTCACAGGACTCCTaGAGCCGCGGTGGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWESQDS*SRGGFL
Trigger: TAAAAAGCCACCGCGGCTCCAGGAGTCCTGTGACTC...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAAGAAGTGGCACTGCCTaGGCCCCCTTGTGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLRSGTA*APLWGR
Trigger: TCGGCCCCACAAGGGGGCCCAGGCAGTGCCACTTCT...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTAGTGCAGGAAGACCCTaGCACGGTCACATGCCATCC +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLSAGRP*HGHMPS
Trigger: GGATGGCATGTGACCGTGCCAGGGTCTTCCTGCACT...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCAGTGCTGGGAGACCGTaGAGGGTATCTCTGCAACCA +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASSAGRP*RVSLQP
Trigger: TGGTTGCAGAGATACCCTCCACGGTCTCCCAGCACT...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCCGAGTCACCACCTGTaGGTACCTGCGCTTGATGGA +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIPSHHL*VPALDG
Trigger: TCCATCAAGCGCAGGTACCCACAGGTGGTGACTCGG...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTCCGAGTCACCACCTGTaGGTACCTGCGCTTGATGGA +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLPSHHL*VPALDG
Trigger: TCCATCAAGCGCAGGTACCCACAGGTGGTGACTCGG...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAACTTGCTGCCCTCCGTaGGGAGCCCAAGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLTCCPP*GAQAGG
Trigger: GCCACCAGCTTGGGCTCCCCACGGAGGGCAGCAAGT...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGCCAGCTCGCCCACTGTaGGCTCCTGGTCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQPARPL*APGHPG
Trigger: GCCTGGGTGACCAGGAGCCCACAGTGGGCGAGCTGG...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCAGGATCAGCTGCTTCTaGGCACGCACAGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIRISCF*ARTAVL
Trigger: GAGCACAGCTGTGCGTGCCCAGAAGCAGCTGATCCT...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGCCTCGGCCCACTGCTTaGCCCGGATCCGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQPRPTA*PGSASG
Trigger: GCCAGATGCGGATCCGGGCCAAGCAGTGGGCCGAGG...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCGCCCTCAGACAGTTTTaGGAAAGCCAGACTGGGGTG +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAALRQF*ESQTGV
Trigger: CACCCCAGTCTGGCTTTCCCAAAACTGTCTGAGGGC...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGAAAAGCAGACAGCCTaGAGCAAACAAGGGCACACC +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASEKQTA*SKQGHT
Trigger: GGTGTGCCCTTGTTTGCTTCAGGCTGTCTGCTTTTC...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTCCTTCTTGGCAGCTCTaGAGATGGCATCCGACTTCC +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLPSWQL*RWHPTS
Trigger: GGAAGTCGGATGCCATCTTCAGAGCTGCCAAGAAGG...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGCTGGTCTCCCTGCCTTaGCACCACCGTGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQLVSLP*HHRACR
Trigger: CCTGCAGGCACGGTGGTGTCAAGGCAGGGAGACCAG...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTACCACCGTGGACAGGTTaGCAGCCGGGTTCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLPPWTG*QPGSPS
Trigger: ACTTGGGGAACCCGGCTGTCAACCTGTCCACGGTGG...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAGAGGGGCACTTCCTCTaGCACGGGCATCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLEGHFL*HGHHCH
Trigger: GTGGCAGTGATGCCCGTGTCAGAGGAAGTGCCCCTC...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAGACAGCCGGTACTCGTaGACACTGTCCAGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLDSRYS*TLSRAA
Trigger: CGCTGCCCTGGACAGTGTTCACGAGTACCGGCTGTC...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTACCTCTACCCGCTCATaGTCACACCTGGACACTTTT +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSTSTRS*SHLDTF
Trigger: AAAAGTGTCCAGGTGTGAGCATGAGCGGGTAGAGGT...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTCCCCTTCCTGCAGCTaGACAAAGACGATGTGTTTG +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSSPSCS*TKTMCL
Trigger: CAAACACATCGTCTTTGTGCAGCTGCAGGAAGGGGA...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GACGGAGACCGTTTTGTAAGGTGCAGCATGGCCGGTGATGATGTCCAGGATGCTCCTGCACCACACAGATaGTGGGGTCCGGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: DGDRFVRCSMAGDDVQDAPAPHR*WGPAPW
Trigger: CCAGGGAGCCGGACCCCAGCATCTGTGTGGTGCAGG...AGCATCCTGGACATCATCACCGGCCATGCTGCACCTTACAAAACGGTCTCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR GCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTACGTCAGTGTCCTGGATaGAGACCTCCAGCCGCCCGT +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLRQCPG*RPPAAR
Trigger: ACGGGCGGCTGGAGGTCTGCATCCAGGACACTGACG...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGACGGAGCTCCCGGGGTaGTCGTCCGAGTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQTELPG*SSECRK
Trigger: CTTCCTGCACTCGGACGAGCACCCCGGGAGCTCCGT...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTCGTGGAGGGTATCTCTaGAACCATCACGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSRGGYL*NHHAFP
Trigger: AGGAAAAGCGTGATGGTTGCAGAGATACCCTCCACG...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTATTCCGCTGGTACACGTaGAGCAGCCCCGAGACCACG +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLFRWYT*SSPETT
Trigger: CGTGGTCTCGGGGCTGCTGCACGTGTACCAGCGGAA...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAGGACGTGAGGGCTCCTaGCGGCAGCTTGGCCAATTC +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLGREGS*RQLGQF
Trigger: GAATTGGCCAAGCTGCCGGCAGGAGCCCTCACGTCC...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTACCTGTCACAGGTCCCTaGTGGAGGCTGCCCAGGATC +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLPVTGP*WRLPRI
Trigger: GATCCTGGGCAGCCTCCAGCAGGGACCTGTGACAGG...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTACCAAGTCCCACTTGCTaGCCTCCGTGGGGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLPSPTC*PPWGAQ
Trigger: TTGGGCTCCCCACGGAGGGCAGCAAGTGGGACTTGG...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGTCCCCAAGTCCCACTTaGTGCCCTCCGTGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQSPSPT*CPPWGA
Trigger: GGCTCCCCACGGAGGGCAGCAAGTGGGACTTGGGGA...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGCCGCTGGAAGACATaGTTGTACATCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLGRWKT*LYISTS
Trigger: GCTGGTGGAGATGTACAAGCATGTCTTCCAGCGGCC...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGATGCCCTCGGCCCACTaGTTGGCCCGGATCCGCATC +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQMPSAH*LARIRI
Trigger: GATGCGGATCCGGGCCAAGCAGTGGGCCGAGGGCAT...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCACAGGTCCTCGATCTaGTGGTCCTTGAAGACGCTG +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIHRSSI*WSLKTL
Trigger: CAGCGTCTTCAAGGACCAGCAGATCGAGGACCTGTG...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCACTCGCAGTAGTCACTaGTCTTCACCACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASTRSSH*SSPPPA
Trigger: AGCTGGAGGTGGTGAAGAGCAGTGACTACTGCGAGT...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAGTGCCGTCAGTGTCCTaGATGCAGACCTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLVPSVS*MQTSSR
Trigger: GCGGCTGGAGGTCTGCATCCAGGACACTGACGGCAC...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTATGAAAAGCCGCAGCTaGAAGCCGGAGGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLMKSRS*KPEDGG
Trigger: TCCACCATCCTCCGGCTTCCAGCTGCGGCTTTTCAT...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTAGATCTGTTTGCGAATaGAAGGCGCGGGGACGGAGT +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLRSVCE*KARGRS
Trigger: ACTCCGTCCCCGCGCCTTCCATTCGCAAACAGATCT...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAGCTGCCCCAGCCAGCTaGACAGCCGGTACTCGTGAA +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLAAPAS*TAGTRE
Trigger: TTCACGAGTACCGGCTGTCCAGCTGGCTGGGGCAGC...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGAGGTCCTCGATCTGCTaGTCCTTGAAGACGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWRSSIC*SLKTLK
Trigger: CTTCAGCGTCTTCAAGGACCAGCAGATCGAGGACCT...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCAGGTCCTCGATCTGCTaGTCCTTGAAGACGCTGAAG +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEARSSIC*SLKTLK
Trigger: CTTCAGCGTCTTCAAGGACCAGCAGATCGAGGACCT...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTTGGGCTGAGGTGCTCTaGAAGTCTGCGTATGCATCC +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLWAEVL*KSAYAS
Trigger: GGATGCATACGCAGACTTCCAGAGCACCTCAGCCCA...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GACGGAGACCGTTTTGTAAGGTGCAGCATGGCCGGTGATGATGTCCAGGATGCTGTGCCGTCCTGCGCTTaGAGAGCAGAGTGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: DGDRFVRCSMAGDDVQDAVPSCA*RAEWVP
Trigger: CGGCACCCACTCTGCTCTCCAAGCGCAGGACGGCAC...AGCATCCTGGACATCATCACCGGCCATGCTGCACCTTACAAAACGGTCTCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR TCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGCCGGGTATTCCTTCTTaGAACGCAGAATCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWPGIPS*NAESSW
Trigger: CCAAGAGGATTCTGCGTTTCAAGAAGGAATACCCGG...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGGCCATCCAACAGAGATaGGTCTTCCAGCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWAIQQR*VFQLHQ
Trigger: CTGATGAAGCTGGAAGACTCATCTCTGTTGGATGGC...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCTTCTCACCCAAGAGATaGATCAGCCGAGTCACCACC +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIFSPKR*ISRVTT
Trigger: GGTGGTGACTCGGCTGATTCATCTCTTGGGTGAGAA...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACAGGCGGGAGAAGTCTaGGTGTCGGTCCGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTQAGEV*VSVRGP
Trigger: CGGCCCCCGGACCGACACTCAGACTTCTCCCGCCTG...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCCATGTTCAACACCTTaGCTTTCGTGGCCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIPCSTP*LSWPRG
Trigger: ACCCCTTGGCCACGAAAGTCAAGGTGTTGAACATGG...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GCGGACGGAGACCGTTTTGTAAGGTGCAGCATGGCCGGTGATGATGTCCAGGATACCTCTGAGGCGCCATaGGAGCAGCAGGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: ADGDRFVRCSMAGDDVQDTSEAP*EQQAQC
Trigger: ACACTGTGCCTGCTGCTCTCATGGCGCCTCAGAGGT...ATCCTGGACATCATCACCGGCCATGCTGCACCTTACAAAACGGTCTCCGTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR GCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGACCTCTACCCGCTCATaGTCACACCTGGACACTTTT +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWTSTRS*SHLDTF
Trigger: AAAAGTGTCCAGGTGTGAGCATGAGCGGGTAGAGGT...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTACAGGAGGGCTCCAACTaGAATCCCCGTCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLQEGSN*NPRQLW
Trigger: CCACAGCTGACGGGGATTGCAGTTGGAGCCCTCCTG...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277531.8
CDS-3UTR GCA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTCAAAGACGATGTGTTTaGAAAGCTCCAGGAACAGCG +
Preference number: 4 (lower is better)
Translates to: AGASALGTVPRKTLHPGSQRRCV*KAPGTA
Trigger: CGCTGTTCCTGGAGCTTTGCAAACACATCGTCTTTG...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCTCCCCTTCCTGCAGCTaGACAAAGACGATGTGTTTG +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEASPSCS*TKTMCL
Trigger: CAAACACATCGTCTTTGTGCAGCTGCAGGAAGGGGA...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp TGGTGGACGGGATGGCCGCGCGGACGGAGACCGTTTTGTAAGGTGCAGCATGGCTCCCCTTCCTGCAGCTaGACAAAGACGATGTGTTTG +
Preference number: 4 (lower is better)
Translates to: WWTGWPRGRRPFCKVQHGSPSCS*TKTMCL
Trigger: CAAACACATCGTCTTTGTGCAGCTGCAGGAAGGGGA...GCCATGCTGCACCTTACAAAACGGTCTCCGTCCGCGCGGCCATCCCGTCCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR GCA 90 bp CCAGAACCTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTGGAGAGCAGAGTACGTGCTCCCCTTCCTaGAGCTGCACAAAGACGATG +
Preference number: 4 (lower is better)
Translates to: PEPLSPPPRCRPALGEQSTCSPS*SCTKTM
Trigger: CATCGTCTTTGTGCAGCTGCAGGAAGGGGAGCACGT...ACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR GCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCGACCGTTTTGTAAGGTaGAGCATGGCCGGTGATGAT +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEADRFVR*SMAGDD
Trigger: ATCATCACCGGCCATGCTGCACCTTACAAAACGGTC...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGCACCATGATGATCTaGACCACCCTCACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIRTMMI*TTLTRV
Trigger: AACTCTGGTGAGGGTGGTGCAGATCATCATGGTGCG...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTCGCACCATGATGATCTaGACCACCCTCACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLRTMMI*TTLTRV
Trigger: AACTCTGGTGAGGGTGGTGCAGATCATCATGGTGCG...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTACTCTTCACCACAGTGTaGGCCACACCCAGGACGACG +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLLFTTV*ATPRTT
Trigger: CGTCGTCCTGGGTGTGGCGCACACTGTGGTGAAGAG...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGGGGCCCTCCTCCCTGTaGAGCAGGATCAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQGPSSL*SRISCF
Trigger: GAAGCAGCTGATCCTGCTGCACAGGGAGGAGGGCCC...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGGCGCGTCTGAATCTCTaGCATGTTCAACACCTTGAC +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWARLNL*HVQHLD
Trigger: GTCAAGGTGTTGAACATGGCAGAGATTCAGACGCGC...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCAATCCCCGTCAGCTGTaGGCTGTCATCTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASNPRQL*AVIFLF
Trigger: GAAGAGAAAGATGACAGCCCACAGCTGACGGGGATT...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277531.8
CDS-3UTR CCA 90 bp CTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTGGAGAGCAGAGTGGGTGCCACCGGTACTGAGGAGTaGGCTGTGCTTGTCGAAATT +
Preference number: 4 (lower is better)
Translates to: LFHHHLGAVLRLESRVGATGTEE*AVLVEI
Trigger: AATTTCGACAAGCACAGCCCACTCCTCAGTACCGGT...GGCACCCACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CCA 90 bp CAGAACCTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTGGAGAGCAGAGTGAGCGGCTTCTCAAAGTaGCCCAGGACCCGAACGTTT +
Preference number: 4 (lower is better)
Translates to: QNLFHHHLGAVLRLESRVSGFSK*PRTRTF
Trigger: AAACGTTCGGGTCCTGGGCCACTTTGAGAAGCCGCT...CACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CCA 90 bp CAGAACCTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTGGAGAGCAGAGTGATGAAAAGCCGCAGCTaGAAGCCGGAGGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: QNLFHHHLGAVLRLESRVMKSRS*KPEDGG
Trigger: TCCACCATCCTCCGGCTTCCAGCTGCGGCTTTTCAT...CACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTATCCCGGCAGCCACACTaGCTACAGACACGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLSRQPH*LQTREG
Trigger: TCCCTCTCGTGTCTGTAGCCAGTGTGGCTGCCGGGA...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTATTTTCCTGGACTTGCTaGCCACGGAGCTCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLFSWTC*PRSSRG
Trigger: ACCCCGGGAGCTCCGTGGCCAGCAAGTCCAGGAAAA...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAAAGCAGGTGTCCTCCTaGCTGCCGATCTTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLKQVSS*LPIFRW
Trigger: CCAGCGGAAGATCGGCAGCCAGGAGGACACCTGCTT...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACAGTGAGCACGGCCAGCTaGCCCACCATCTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTVSTAS*PTISPG
Trigger: CCCCGGGGAGATGGTGGGCCAGCTGGCCGTGCTCAC...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCATAGAAGTGGGCCTTaGAGATGGACAGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIHRSGP*RWTGSC
Trigger: GCAGCTTCCTGTCCATCTCCAAGGCCCACTTCTATG...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAGTCACAGGTCCCTGCTaGAGGCTGCCCAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLVTGPC*RLPRIF
Trigger: GAAGATCCTGGGCAGCCTCCAGCAGGGACCTGTGAC...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTATTGAGAACGCCCACCTaGGCACAGCCTCTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLLRTPT*AQPLAP
Trigger: GGGAGCAAGAGGCTGTGCCCAGGTGGGCGTTCTCAA...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTACTGCGTATGCATCCCTaGGGACGTCCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLLRMHP*GRPAAP
Trigger: AGGAGCTGCTGGACGTCCCCAGGGATGCATACGCAG...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCGCAGAAGTCAGCCTGTaGGCTGTCATCTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAAEVSL*AVIFLF
Trigger: GAAGAGAAAGATGACAGCCCACAGGCTGACTTCTGC...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406427.6
CDS-3UTR TCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCTTCTCAAAAACTCCATaGAAAGCCGCAGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASFSKTP*KAAAGS
Trigger: GCTTCCAGCTGCGGCTTTTCATGGAGTTTTTGAGAA...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCGCCATCCAACAGAGATaGGTCTTCCAGCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIAIQQR*VFQLHQ
Trigger: CTGATGAAGCTGGAAGACTCATCTCTGTTGGATGGC...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACATCGGGCCGATGGCGCTaGGGGCATGCTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTSGRWR*GHAPAP
Trigger: TGGAGCTGGAGCATGCCCTCAGCGCCATCGGCCCGA...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTACAGCATGGTGGACGGTaGACCTTCCTCCGTGAACCA +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLQHGGR*TFLREP
Trigger: TGGTTCACGGAGGAAGGTTCACCGTCCACCATGCTG...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406427.6
CDS-3UTR GCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGCTGAGGAGTGGGCTGTaGTTGTCGAAATTGTCTAAG +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWLRSGL*LSKLSK
Trigger: CTTAGACAATTTCGACAAGCACAGCCCACTCCTCAG...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGTGGCATCCGACTTCCTaGTGGCCAGGGTCTCATCCG +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQWHPTS*WPGSHP
Trigger: CGGATGAGACCCTGGCCAGCAGGAAGTCGGATGCCA...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAAGGTGTCCTCCTGGCTaGCGATCTTCCGCTGGTACA +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLRCPPG*RSSAGT
Trigger: TGTACCAGCGGAAGATCGGCAGCCAGGAGGACACCT...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGTGCCGAAGTCCAGGGTaGTGTAGCTGTCGATGGGGG +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQCRSPG*CSCRWG
Trigger: CCCCCATCGACAGCTACAGCACCCTGGACTTCGGCA...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGTCTCCAGCACGCCGCTaGGGCCCCAGATGTCAAACA +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQSPARR*GPRCQT
Trigger: TGTTTGACATCTGGGGCCGCAGCGGCGTGCTGGAGA...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACACTCGCGGGCTTCTTaGTCGGCCCCTGCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTHSRAS*SAPAGR
Trigger: GCGACCAGCAGGGGCCGAGCAAGAAGCCCGCGAGTG...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTAACGCAGAATCCTCTTaGCCAAAGACAGCACCTTGG +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLNAESS*PKTAPW
Trigger: CCAAGGTGCTGTCTTTGGCCAAGAGGATTCTGCGTT...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAAGAACACCTGCTTCTTaGCCTTCCCGGCAGCCACAC +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLRTPAS*PSRQPH
Trigger: GTGTGGCTGCCGGGAAGGCCAAGAAGCAGGTGTTCT...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTACTCCTGGAGCCGCGGTaGCTTTTTAAGCCGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLLLEPR*LFKPLF
Trigger: GAAGAGCGGCTTAAAAAGCCACCGCGGCTCCAGGAG...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAAGTGCAGGAAGACCCTaGCACGGTCACATGCCATCC +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLSAGRP*HGHMPS
Trigger: GGATGGCATGTGACCGTGCCAGGGTCTTCCTGCACT...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACAGTGGTCGCCCGGGCCTaGTGGGTCAGTGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTVVARA*WVSVST
Trigger: GGTGGAGACACTGACCCACCAGGCCCGGGCGACCAC...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCAGCTCGCCCACTGTaGGCTCCTGGTCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTPARPL*APGHPG
Trigger: GCCTGGGTGACCAGGAGCCCACAGTGGGCGAGCTGG...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCGGCCCACTGCTTaGCCCGGATCCGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTPRPTA*PGSASG
Trigger: GCCAGATGCGGATCCGGGCCAAGCAGTGGGCCGAGG...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGCCGGGCCACATCCGCTaGGAGGTTGTTGATGTAGCC +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQPGHIR*EVVDVA
Trigger: GGCTACATCAACAACCTCCCAGCGGATGTGGCCCGG...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGCAGGAGCCTCAGCCTTaGGGACAGTCCCACGGAAGA +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQQEPQP*GQSHGR
Trigger: TCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTG...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp CAGAACCTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTGGAGAGCAGAGTGCCGGGTATTCCTTCTTaGAACGCAGAATCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: QNLFHHHLGAVLRLESRVPGIPS*NAESSW
Trigger: CCAAGAGGATTCTGCGTTTCAAGAAGGAATACCCGG...CACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR TCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGAGGGTCTCATCCGTGTaGCTCTCTGAGTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQRVSSV*LSECWE
Trigger: CTCCCAGCACTCAGAGAGTCACACGGATGAGACCCT...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTACTTCGCAGATCTCGTTaGACTTGCCGAAGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLLRRSR*TCRSPG
Trigger: CCCTGGACTTCGGCAAGTTCAACGAGATCTGCGAAG...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGGAGATCCACCTTTATTaGAACATCACACGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWEIHLY*NITRQH
Trigger: ATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTC...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp TGTCTCCCGCCAGAACCTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTGGACTGAGGAGTGGGCTGTaGTTGTCGAAATTGTCTAAG +
Preference number: 4 (lower is better)
Translates to: CLPPEPLSPPPRCRPALGLRSGL*LSKLSK
Trigger: CTTAGACAATTTCGACAAGCACAGCCCACTCCTCAG...TCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTGGCGGGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR GCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACAAGGGTCAGGGTCACCTaGCCCGGGCTTCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTRVRVT*PGLLQL
Trigger: GAGCTGGAGAAGCCCGGGGCAGGTGACCCTGACCCT...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGAGATGTCAAACACCGTaGGCCCGTGCTGGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQRCQTP*ARAGSP
Trigger: TGGGCTACCAGCACGGGCGCACGGTGTTTGACATCT...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGGGTGCTCTGGAAGTCTaGGTATGCATCCCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQGALEV*VCIPGD
Trigger: GTCCCCAGGGATGCATACGCAGACTTCCAGAGCACC...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTATCTCCACAAGGGTGTTaGGGAGTGTGGTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLSPQGC*GVWSPS
Trigger: GGAAGGTGACCACACTCCCCAACACCCTTGTGGAGA...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CGCGCGGACGGAGACCGTTTTGTAAGGTGCAGCATGGCCGGTGATGATGTCCAGAACGCAGAATCCTCTTaGCCAAAGACAGCACCTTGG +
Preference number: 4 (lower is better)
Translates to: RADGDRFVRCSMAGDDVQNAESS*PKTAPW
Trigger: CCAAGGTGCTGTCTTTGGCCAAGAGGATTCTGCGTT...CTGGACATCATCACCGGCCATGCTGCACCTTACAAAACGGTCTCCGTCCGCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CCA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGTACAGAACTTCCGATaGCAGGTGAGAATTCTTCAC +
Preference number: 4 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASVQNFR*QVRILH
Trigger: GTGAAGAATTCTCACCTGCCATCGGAAGTTCTGTAC...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTATGGGCTGAGGTGCTCTaGAAGTCTGCGTATGCATCC +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLWAEVL*KSAYAS
Trigger: GGATGCATACGCAGACTTCCAGAGCACCTCAGCCCA...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTACAATCCCCGTCAGCATaGTGGACGGTGAACCTTCCT +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLQSPSA*WTVNLP
Trigger: AGGAAGGTTCACCGTCCACCATGCTGACGGGGATTG...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406427.6
CDS-3UTR TCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTATTCTCACCCAAGAGATaGATCAGCCGAGTCACCACC +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLFSPKR*ISRVTT
Trigger: GGTGGTGACTCGGCTGATTCATCTCTTGGGTGAGAA...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CAGAACCTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTGGAGAGCAGAGTGCAAAGACGATGTGTTTaGAAAGCTCCAGGAACAGCG +
Preference number: 4 (lower is better)
Translates to: QNLFHHHLGAVLRLESRVQRRCV*KAPGTA
Trigger: CGCTGTTCCTGGAGCTTTGCAAACACATCGTCTTTG...CACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR GCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGACGTGCTCCCCTTCCTaGAGCTGCACAAAGACGATG +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQTCSPS*SCTKTM
Trigger: CATCGTCTTTGTGCAGCTGCAGGAAGGGGAGCACGT...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGTGTGAGCGTGCCATCTaGCTGGTAGAGCACGATCCT +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQCERAI*LVEHDP
Trigger: AGGATCGTGCTCTACCAGGCAGATGGCACGCTCACA...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACAGGCGATCACCACTTTTaGCCCCATGGACCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTGDHHF*PHGPGH
Trigger: GTGGCCCGGTCCATGGGGGCAAAAGTGGTGATCGCC...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAGCTTGGCGGGCTCAATaGGAGACACAATTTCGGCAA +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLAWRAQ*ETQFRQ
Trigger: TTGCCGAAATTGTGTCTCGCATTGAGCCCGCCAAGC...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGCTGGACACTTTTCCCTaGGTTCCTTTCAAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWLDTFP*VPFKSN
Trigger: ATTTGACTTGAAAGGAACCCAGGGAAAAGTGTCCAG...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAGCTCATGCTCACACCTaGACACTTTTCCCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLAHAHT*TLFPGF
Trigger: GAACCCAGGGAAAAGTGTCCAGGTGTGAGCATGAGC...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGTACAGAACTTCCGATaGCAGGTGAGAATTCTTCAC +
Preference number: 4 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLVQNFR*QVRILH
Trigger: GTGAAGAATTCTCACCTGCCATCGGAAGTTCTGTAC...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGAGTGCTGGGAGACCGTaGAGGGTATCTCTGCAACCA +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQSAGRP*RVSLQP
Trigger: TGGTTGCAGAGATACCCTCCACGGTCTCCCAGCACT...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACATTGCTCGGCCCCTGCTaGTCGCGGAGCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTLLGPC*SRSIFS
Trigger: GGAGAAGATGCTCCGCGACCAGCAGGGGCCGAGCAA...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCACCATGGCGGGCTTaGCGGGCTCAATGCGAGACA +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTPPWRA*RAQCET
Trigger: TGTCTCGCATTGAGCCCGCCAAGCCCGCCATGGTGG...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTGGCTCTCAGCGTTaGAGAGCTCTGTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTPGSQR*RALWSG
Trigger: GCCTGACCACAGAGCTCTTCAACGCTGAGAGCCAGG...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGCCATGTTCAACACCTTaGCTTTCGTGGCCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQPCSTP*LSWPRG
Trigger: ACCCCTTGGCCACGAAAGTCAAGGTGTTGAACATGG...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACAGTGTCGATGCCGCAGTaGGGACTCGTCCTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTVSMPQ*GLVLQV
Trigger: GACTTGGAGGACGAGTCCTCACTGCGGCATCGACAC...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACATGCCGAAGTCCAGGGTaGTGTAGCTGTCGATGGGGG +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTCRSPG*CSCRWG
Trigger: CCCCCATCGACAGCTACAGCACCCTGGACTTCGGCA...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACGGTCCGGGGGCCGCTaGAAGACATGCTTGTACATC +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTRSGGR*KTCLYI
Trigger: GATGTACAAGCATGTCTTCCAGCGGCCCCCGGACCG...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACATCCCCGTCAGCATGGTaGACGGTGAACCTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTSPSAW*TVNLPP
Trigger: CGGAGGAAGGTTCACCGTCCACCATGCTGACGGGGA...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406427.6
CDS-3UTR TCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGCCGGGTATTCCTTCTTaGAACGCAGAATCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQPGIPS*NAESSW
Trigger: CCAAGAGGATTCTGCGTTTCAAGAAGGAATACCCGG...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGGACCGTTTTGTAAGGTaGAGCATGGCCGGTGATGAT +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQDRFVR*SMAGDD
Trigger: ATCATCACCGGCCATGCTGCACCTTACAAAACGGTC...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CTCAAAAACTCCATGAAAAGCCGCAGCTGGAAGCCGGAGGATGGTGGACGGGATGACCGTTTTGTAAGGTaGAGCATGGCCGGTGATGAT +
Preference number: 4 (lower is better)
Translates to: LKNSMKSRSWKPEDGGRDDRFVR*SMAGDD
Trigger: ATCATCACCGGCCATGCTGCACCTTACAAAACGGTC...ATCCCGTCCACCATCCTCCGGCTTCCAGCTGCGGCTTTTCATGGAGTTTTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR GCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACATGCAGCAGGATCAGCTaGTTCTGGGCACGCACAGCT +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTCSRIS*FWARTA
Trigger: AGCTGTGCGTGCCCAGAAGCAGCTGATCCTGCTGCA...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACATCATCAAGGACGTCATaGCCTCGGCCCACTGCTTGG +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTSSRTS*PRPTAW
Trigger: CCAAGCAGTGGGCCGAGGGCATGACGTCCTTGATGA...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGGCGCGTCTGAATCTCTaGCATGTTCAACACCTTGAC +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQARLNL*HVQHLD
Trigger: GTCAAGGTGTTGAACATGGCAGAGATTCAGACGCGC...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGAACGCAGAATCCTCTTaGCCAAAGACAGCACCTTGG +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQNAESS*PKTAPW
Trigger: CCAAGGTGCTGTCTTTGGCCAAGAGGATTCTGCGTT...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACATCCGACTTCCTGCTaGCCAGGGTCTCATCCGTGT +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTHPTSC*PGSHPC
Trigger: ACACGGATGAGACCCTGGCCAGCAGGAAGTCGGATG...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACAAAGTCTGAGCCCTGCTaGGCTGAGGTGCTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTKSEPC*AEVLWK
Trigger: CTTCCAGAGCACCTCAGCCCAGCAGGGCTCAGACTT...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGTTCTCAAAAACTCCATaGAAAGCCGCAGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQFSKTP*KAAAGS
Trigger: GCTTCCAGCTGCGGCTTTTCATGGAGTTTTTGAGAA...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp GACGGAGACCGTTTTGTAAGGTGCAGCATGGCCGGTGATGATGTCCAGGATGCTTTCTCAAAAACTCCATaGAAAGCCGCAGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: DGDRFVRCSMAGDDVQDAFSKTP*KAAAGS
Trigger: GCTTCCAGCTGCGGCTTTTCATGGAGTTTTTGAGAA...AGCATCCTGGACATCATCACCGGCCATGCTGCACCTTACAAAACGGTCTCCGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR GCA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGCAAAGACGATGTGTTTaGAAAGCTCCAGGAACAGCG +
Preference number: 4 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQQRRCV*KAPGTA
Trigger: CGCTGTTCCTGGAGCTTTGCAAACACATCGTCTTTG...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACAACGTGCTCCCCTTCCTaGAGCTGCACAAAGACGATG +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTTCSPS*SCTKTM
Trigger: CATCGTCTTTGTGCAGCTGCAGGAAGGGGAGCACGT...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACATGTGAGCGTGCCATCTaGCTGGTAGAGCACGATCCT +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTCERAI*LVEHDP
Trigger: AGGATCGTGCTCTACCAGGCAGATGGCACGCTCACA...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACAGGCCGCTGGAAGACATaGTTGTACATCTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTGRWKT*LYISTS
Trigger: GCTGGTGGAGATGTACAAGCATGTCTTCCAGCGGCC...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp GCGGACGGAGACCGTTTTGTAAGGTGCAGCATGGCCGGTGATGATGTCCAGGATGTACAGAACTTCCGATaGCAGGTGAGAATTCTTCAC +
Preference number: 4 (lower is better)
Translates to: ADGDRFVRCSMAGDDVQDVQNFR*QVRILH
Trigger: GTGAAGAATTCTCACCTGCCATCGGAAGTTCTGTAC...ATCCTGGACATCATCACCGGCCATGCTGCACCTTACAAAACGGTCTCCGTCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACAAGCGGCTTCTCAAAGTaGCCCAGGACCCGAACGTTT +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTSGFSK*PRTRTF
Trigger: AAACGTTCGGGTCCTGGGCCACTTTGAGAAGCCGCT...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACAGAGTCACAGGACTCCTaGAGCCGCGGTGGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTESQDS*SRGGFL
Trigger: TAAAAAGCCACCGCGGCTCCAGGAGTCCTGTGACTC...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACAACTCGCAGTAGTCACTaGTCTTCACCACCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTTRSSH*SSPPPA
Trigger: AGCTGGAGGTGGTGAAGAGCAGTGACTACTGCGAGT...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACATAGAAGTGGGCCTTaGAGATGGACAGGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTHRSGP*RWTGSC
Trigger: GCAGCTTCCTGTCCATCTCCAAGGCCCACTTCTATG...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACATGGTCACCTTCCTCATaGTCTTCCGGCCGTAAAACA +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTWSPSS*SSGRKT
Trigger: TGTTTTACGGCCGGAAGATCATGAGGAAGGTGACCA...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR GCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACGTGGAGGGTATCTCTaGAACCATCACGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTRGGYL*NHHAFP
Trigger: AGGAAAAGCGTGATGGTTGCAGAGATACCCTCCACG...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACAACCGGTACTGAGGAGTaGGCTGTGCTTGTCGAAATT +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTTGTEE*AVLVEI
Trigger: AATTTCGACAAGCACAGCCCACTCCTCAGTACCGGT...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR TCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACAGAGATCCACCTTTATTaGAACATCACACGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTEIHLY*NITRQH
Trigger: ATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTC...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CCA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACTGGACACTTTTCCCTaGGTTCCTTTCAAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTLDTFP*VPFKSN
Trigger: ATTTGACTTGAAAGGAACCCAGGGAAAAGTGTCCAG...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS CCA 90 bp ACGTGGTGCCCGGGACGGAGGAGTGCCACCAAGCACCCCAGCTGCTaGAGCCTGGGCGTGGACGTGGGCGGGAGGGGAGGCCGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: TWCPGRRSATKHPSC*SLGVDVGGRGGRGP
Trigger: AGGCCCACGGCCTCCCCTCCCGCCCACGTCCACGCCCAGGCTCCAGCAGCTGGGGTGCTTGGTGGCACTCCTCCGTCCCGGGCACCACGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CCA 90 bp CTGGGCGTGGGCGTGGCCCGAAGAACTGGGCGCGGTCCGGGGAGCTaGGCGTGGTCCGGACGCCCGTACTCACCGCACTCGCGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: LGVGVARRTGRGPGS*AWSGRPYSPHSRAS
Trigger: AGAAGCCCGCGAGTGCGGTGAGTACGGGCGTCCGGACCACGCCCAGCTCCCCGGACCGCGCCCAGTTCTTCGGGCCACGCCCACGCCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS CCA 90 bp CGGTGCCGTCCTGCGCTTGGAGAGCAGAGTGGGTGCCGTCAGGTCTaGGGCTGCGACCGCGGGGCCTGGCGGAGGCTCAGCCCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: RCRPALGEQSGCRQV*GCDRGAWRRLSPAQ
Trigger: CTGGGCTGGGCTGAGCCTCCGCCAGGCCCCGCGGTCGCAGCCCCAGACCTGACGGCACCCACTCTGCTCTCCAAGCGCAGGACGGCACCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS GCA 90 bp AACACGTGGTGCCCGGGACGGAGGAGTGCCACCAAGCACCCCAGCTaGTGGAGCCTGGGCGTGGACGTGGGCGGGAGGGGAGGCCGTGGG +
Preference number: 5 (lower is better)
Translates to: NTWCPGRRSATKHPS*WSLGVDVGGRGGRG
Trigger: CCCACGGCCTCCCCTCCCGCCCACGTCCACGCCCAGGCTCCAGCAGCTGGGGTGCTTGGTGGCACTCCTCCGTCCCGGGCACCACGTGTT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CCA 90 bp GTGGGCGTGGCCCGAAGAACTGGGCGCGGTCCGGGGAGCTGGGCGTaGTCCGGACGCCCGTACTCACCGCACTCGCGGGCTTCTTGCTCG +
Preference number: 5 (lower is better)
Translates to: VGVARRTGRGPGSWA*SGRPYSPHSRASCS
Trigger: CGAGCAAGAAGCCCGCGAGTGCGGTGAGTACGGGCGTCCGGACCACGCCCAGCTCCCCGGACCGCGCCCAGTTCTTCGGGCCACGCCCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS GCA 90 bp CGGACGCCCGTACTCACCGCACTCGCGGGCTTCTTGCTCGGCCCCTaGTGGTCGCGGAGCATCTTCTCCAGCACGCCGCTGCGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: RTPVLTALAGFLLGP*WSRSIFSSTPLRPQ
Trigger: CTGGGGCCGCAGCGGCGTGCTGGAGAAGATGCTCCGCGACCAGCAGGGGCCGAGCAAGAAGCCCGCGAGTGCGGTGAGTACGGGCGTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS GCA 90 bp TCACCACCACCTCGGTGCCGTCCTGCGCTTGGAGAGCAGAGTGGGTaGCGTCAGGTCTGGGGCTGCGACCGCGGGGCCTGGCGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: SPPPRCRPALGEQSG*RQVWGCDRGAWRRL
Trigger: GAGCCTCCGCCAGGCCCCGCGGTCGCAGCCCCAGACCTGACGGCACCCACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS GCA 90 bp TGGGCGTGGTCCGGACGCCCGTACTCACCGCACTCGCGGGCTTCTTaGTCGGCCCCTGCTGGTCGCGGAGCATCTTCTCCAGCACGCCGC +
Preference number: 5 (lower is better)
Translates to: WAWSGRPYSPHSRAS*SAPAGRGASSPARR
Trigger: GCGGCGTGCTGGAGAAGATGCTCCGCGACCAGCAGGGGCCGAGCAAGAAGCCCGCGAGTGCGGTGAGTACGGGCGTCCGGACCACGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS GCA 90 bp TTGGGACAGGTGAGGACCGCACTCGCGGGCTTCTTGCTCGGCCCCTaGTGGTCGCGGAGCATCTTCTCCAGCACGCCGCTGCGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: LGQVRTALAGFLLGP*WSRSIFSSTPLRPQ
Trigger: CTGGGGCCGCAGCGGCGTGCTGGAGAAGATGCTCCGCGACCAGCAGGGGCCGAGCAAGAAGCCCGCGAGTGCGGTCCTCACCTGTCCCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
CDS GCA 90 bp CCCCCAGCCCGATGGCCGCCCTGTGCCTGCCCCCACTGCACCGGCTaGTTCCTAGCCGTGGCCACCAGAGGCCCAAAGGGCAAGATGAAG +
Preference number: 5 (lower is better)
Translates to: PPARWPPCACPHCTG*FLAVATRGPKGKMK
Trigger: CTTCATCTTGCCCTTTGGGCCTCTGGTGGCCACGGCTAGGAAGCAGCCGGTGCAGTGGGGGCAGGCACAGGGCGGCCATCGGGCTGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CCA 90 bp GGACAGGTGAGGACCGCACTCGCGGGCTTCTTGCTCGGCCCCTGCTaGTCGCGGAGCATCTTCTCCAGCACGCCGCTGCGGCCCCAGATG +
Preference number: 5 (lower is better)
Translates to: GQVRTALAGFLLGPC*SRSIFSSTPLRPQM
Trigger: CATCTGGGGCCGCAGCGGCGTGCTGGAGAAGATGCTCCGCGACCAGCAGGGGCCGAGCAAGAAGCCCGCGAGTGCGGTCCTCACCTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
CDS CCA 90 bp ACGCCCGTACTCACCGCACTCGCGGGCTTCTTGCTCGGCCCCTGCTaGTCGCGGAGCATCTTCTCCAGCACGCCGCTGCGGCCCCAGATG +
Preference number: 5 (lower is better)
Translates to: TPVLTALAGFLLGPC*SRSIFSSTPLRPQM
Trigger: CATCTGGGGCCGCAGCGGCGTGCTGGAGAAGATGCTCCGCGACCAGCAGGGGCCGAGCAAGAAGCCCGCGAGTGCGGTGAGTACGGGCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS CCA 90 bp TCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTGGAGAGCAGAGTaGGTGCCGTCAGGTCTGGGGCTGCGACCGCGGGGCCTGGCGGAG +
Preference number: 5 (lower is better)
Translates to: SFTTTSVPSCAWRAE*VPSGLGLRPRGLAE
Trigger: CTCCGCCAGGCCCCGCGGTCGCAGCCCCAGACCTGACGGCACCCACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS CCA 90 bp CGGGGGTCCAGAGTGTCCTTGGGCCCCACCCACGGTCCTGAGGCTTaGCGCCCTGGCTGGAGCCTCAGAGTGAGCAGAGGCTGGTGGTCG +
Preference number: 5 (lower is better)
Translates to: RGSRVSLGPTHGPEA*RPGWSLRVSRGWWS
Trigger: CGACCACCAGCCTCTGCTCACTCTGAGGCTCCAGCCAGGGCGCCAAGCCTCAGGACCGTGGGTGGGGCCCAAGGACACTCTGGACCCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487228.1
CDS GCA 90 bp GGTGACCCGGGGTGGTCACAGTCCCACTGCTGTGGGAACACGTGGTaGCCGGGACGGAGGAGTGCCACCAAGCACCCCAGCTGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: GDPGWSQSHCCGNTW*PGRRSATKHPSCWS
Trigger: GCTCCAGCAGCTGGGGTGCTTGGTGGCACTCCTCCGTCCCGGGCACCACGTGTTCCCACAGCAGTGGGACTGTGACCACCCCGGGTCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS GCA 90 bp ACCGTACCCAGCATAGCCACACTCAGAGGCAGAACCGGCCACAGATaGCCACCCCCGCCTCCAAGGTGGCCCGGGGCCCTACACGCAGCC +
Preference number: 5 (lower is better)
Translates to: TVPSIATLRGRTGHR*PPPPPRWPGALHAA
Trigger: GGCTGCGTGTAGGGCCCCGGGCCACCTTGGAGGCGGGGGTGGGCATCTGTGGCCGGTTCTGCCTCTGAGTGTGGCTATGCTGGGTACGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CCA 90 bp CTGGGTGACCCGGGGTGGTCACAGTCCCACTGCTGTGGGAACACGTaGTGCCCGGGACGGAGGAGTGCCACCAAGCACCCCAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LGDPGWSQSHCCGNT*CPGRRSATKHPSCW
Trigger: CCAGCAGCTGGGGTGCTTGGTGGCACTCCTCCGTCCCGGGCACCACGTGTTCCCACAGCAGTGGGACTGTGACCACCCCGGGTCACCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CCA 90 bp CCCGCCAGAACCTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTaGAGAGCAGAGTGGGTGCCGTCAGGTCTGGGGCTGCGACCGCGG +
Preference number: 5 (lower is better)
Translates to: PARTSFTTTSVPSCA*RAEWVPSGLGLRPR
Trigger: CCGCGGTCGCAGCCCCAGACCTGACGGCACCCACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTGGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS CCA 90 bp GAGGCTTGGCGCCCTGGCTGGAGCCTCAGAGTGAGCAGAGGCTGGTaGTCGCCCCAGGGCCTGAAAGCCAGGACACAGCCCACCCTCGGT +
Preference number: 5 (lower is better)
Translates to: EAWRPGWSLRVSRGW*SPQGLKARTQPTLG
Trigger: ACCGAGGGTGGGCTGTGTCCTGGCTTTCAGGCCCTGGGGCGACCACCAGCCTCTGCTCACTCTGAGGCTCCAGCCAGGGCGCCAAGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487228.1
CDS GCA 90 bp TCGGTGCCGTCAGTGTCCTGGATGCAGACCTCCAGCCGCCCGTCCTaGACCACACAGATGCTGGGGTCCGGCTCCCTGGGCTGGAAGACG +
Preference number: 5 (lower is better)
Translates to: SVPSVSWMQTSSRPS*TTQMLGSGSLGWKT
Trigger: CGTCTTCCAGCCCAGGGAGCCGGACCCCAGCATCTGTGTGGTGCAGGACGGGCGGCTGGAGGTCTGCATCCAGGACACTGACGGCACCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000434090.2
CDS GCA 90 bp AGGGCTCCTGCCGGCAGCTTGGCCAATTCTGAGTCCCGAACGGCATaGACCGTGGTCGCCCGGGCCTGGTGGGTCAGTGTCTCCACCACG +
Preference number: 5 (lower is better)
Translates to: RAPAGSLANSESRTA*TVVARAWWVSVSTT
Trigger: CGTGGTGGAGACACTGACCCACCAGGCCCGGGCGACCACGGTGCATGCCGTTCGGGACTCAGAATTGGCCAAGCTGCCGGCAGGAGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS GCA 90 bp GCAGCAGGCACAGTGTCCTGGATGCAGACCTCCAGCCGCCCGTCCTaGACCACACAGATGCTGGGGTCCGGCTCCCTGGGCTGGAAGACG +
Preference number: 5 (lower is better)
Translates to: AAGTVSWMQTSSRPS*TTQMLGSGSLGWKT
Trigger: CGTCTTCCAGCCCAGGGAGCCGGACCCCAGCATCTGTGTGGTGCAGGACGGGCGGCTGGAGGTCTGCATCCAGGACACTGTGCCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS CCA 90 bp CTGCCGGCAGCTTGGCCAATTCTGAGTCCCGAACGGCATGCACCGTaGTCGCCCGGGCCTGGTGGGTCAGTGTCTCCACCACGCCGACGA +
Preference number: 5 (lower is better)
Translates to: LPAAWPILSPERHAP*SPGPGGSVSPPRRR
Trigger: TCGTCGGCGTGGTGGAGACACTGACCCACCAGGCCCGGGCGACCACGGTGCATGCCGTTCGGGACTCAGAATTGGCCAAGCTGCCGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS CCA 90 bp CAGCACCTCAGTGCCCGGACCGGGCCCCAGAGACAGCTCAGCTACTaGGGGGAGGACACTGGCAGAGGGTACGTGGGCAAGAGAGTGGGC +
Preference number: 5 (lower is better)
Translates to: QHLSARTGPQRQLSY*GEDTGRGYVGKRVG
Trigger: GCCCACTCTCTTGCCCACGTACCCTCTGCCAGTGTCCTCCCCCCAGTAGCTGAGCTGTCTCTGGGGCCCGGTCCGGGCACTGAGGTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CCA 90 bp CATGCTTGTACATCTCCACCTGGGGGAGGAGCCGTCAGGCAGGGCTaGTGCAGGGCCCCACCCTCGGCCGAGACCTCGCATCCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: HACTSPPGGGAVRQG*CRAPPSAETSHPGL
Trigger: CAAGCCAGGATGCGAGGTCTCGGCCGAGGGTGGGGCCCTGCACCAGCCCTGCCTGACGGCTCCTCCCCCAGGTGGAGATGTACAAGCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CCA 90 bp GTGCTGAGGGCCTCTCATGAATGGAACGGGGGTCCAGAGTGTCCTTaGGCCCCACCCACGGTCCTGAGGCTTGGCGCCCTGGCTGGAGCC +
Preference number: 5 (lower is better)
Translates to: VLRASHEWNGGPECP*APPTVLRLGALAGA
Trigger: GGCTCCAGCCAGGGCGCCAAGCCTCAGGACCGTGGGTGGGGCCCAAGGACACTCTGGACCCCCGTTCCATTCATGAGAGGCCCTCAGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487228.1
CDS-3UTR CAA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGAGGGCGGGGGCTCCTaGGGCTGCAGGGCCGGGTAT +
Preference number: 5 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLEGGGS*GCRAGY
Trigger: ATACCCGGCCCTGCAGCCCAAGGAGCCCCCGCCCTC...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp AACTCCATGAAAAGCCGCAGCTGGAAGCCGGAGGATGGTGGACGGGATGGCCGCGAGGGCGGGGGCTCCTaGGGCTGCAGGGCCGGGTAT +
Preference number: 5 (lower is better)
Translates to: NSMKSRSWKPEDGGRDGREGGGS*GCRAGY
Trigger: ATACCCGGCCCTGCAGCCCAAGGAGCCCCCGCCCTC...GCGGCCATCCCGTCCACCATCCTCCGGCTTCCAGCTGCGGCTTTTCATGGAGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CAA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCCCCTCGGCCCACTGCTaGGCCCGGATCCGCATCTGG +
Preference number: 5 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASPSAHC*ARIRIW
Trigger: CCAGATGCGGATCCGGGCCAAGCAGTGGGCCGAGGG...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCGCACTCGCGGGCTTCTaGCTCGGCCCCTGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAALAGF*LGPCWS
Trigger: CGACCAGCAGGGGCCGAGCAAGAAGCCCGCGAGTGC...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS TCA 90 bp TGCCTCCCACCATGTCCACAGGGATGCCGCACTCCGCCAAGGCCTTaGGAACGCCCACCTGGGCACAGCCTCTTGCTCCCCCTCCCCCAA +
Preference number: 5 (lower is better)
Translates to: CLPPCPQGCRTPPRP*ERPPGHSLLLPLPQ
Trigger: TTGGGGGAGGGGGAGCAAGAGGCTGTGCCCAGGTGGGCGTTCTCAAGGCCTTGGCGGAGTGCGGCATCCCTGTGGACATGGTGGGAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
ENST00000492278.5
CDS TCA 90 bp AATGGAACGGGGGTCCAGAGTGTCCTTGGGCCCCACCCACGGTCCTaGGGCTTGGCGCCCTGGCTGGAGCCTCAGAGTGAGCAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: NGTGVQSVLGPHPRS*GLAPWLEPQSEQRL
Trigger: CAGCCTCTGCTCACTCTGAGGCTCCAGCCAGGGCGCCAAGCCTCAGGACCGTGGGTGGGGCCCAAGGACACTCTGGACCCCCGTTCCATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487228.1
CDS TCA 90 bp CTGCGGGCTGCCACAGCAGACACGTGGCGTGCTGAGGGCCTCTCATaGATGGAACGGGGGTCCAGAGTGTCCTTGGGCCCCACCCACGGT +
Preference number: 5 (lower is better)
Translates to: LRAATADTWRAEGLS*MERGSRVSLGPTHG
Trigger: ACCGTGGGTGGGGCCCAAGGACACTCTGGACCCCCGTTCCATTCATGAGAGGCCCTCAGCACGCCACGTGTCTGCTGTGGCAGCCCGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487228.1
CDS GCA 90 bp TCCGCTCCTCAGAGTACAGGGCACCCACGAAGGCCCCGATGGACGTaGCTCCCACCATGTCCACAGGGATGCCGCACTCCGCCAAGGCCT +
Preference number: 5 (lower is better)
Translates to: SAPQSTGHPRRPRWT*LPPCPQGCRTPPRP
Trigger: AGGCCTTGGCGGAGTGCGGCATCCCTGTGGACATGGTGGGAGGCACGTCCATCGGGGCCTTCGTGGGTGCCCTGTACTCTGAGGAGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
ENST00000492278.5
CDS CCA 90 bp CTGGGAGTTGAGGTGAATGAAGGGCAGGGGCTGGGTGACCCGGGGTaGTCACAGTCCCACTGCTGTGGGAACACGTGGTGCCCGGGACGG +
Preference number: 5 (lower is better)
Translates to: LGVEVNEGQGLGDPG*SQSHCCGNTWCPGR
Trigger: CCGTCCCGGGCACCACGTGTTCCCACAGCAGTGGGACTGTGACCACCCCGGGTCACCCAGCCCCTGCCCTTCATTCACCTCAACTCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CCA 90 bp GGGCTGCCACAGCAGACACGTGGCGTGCTGAGGGCCTCTCATGAATaGAACGGGGGTCCAGAGTGTCCTTGGGCCCCACCCACGGTCCTG +
Preference number: 5 (lower is better)
Translates to: GLPQQTRGVLRASHE*NGGPECPWAPPTVL
Trigger: CAGGACCGTGGGTGGGGCCCAAGGACACTCTGGACCCCCGTTCCATTCATGAGAGGCCCTCAGCACGCCACGTGTCTGCTGTGGCAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487228.1
CDS-3UTR CAA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTCCACCATGGCGGGCTaGGCGGGCTCAATGCGAGAC +
Preference number: 5 (lower is better)
Translates to: AGASALGTVPRKTLHPGSSTMAG*AGSMRD
Trigger: GTCTCGCATTGAGCCCGCCAAGCCCGCCATGGTGGA...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS TCA 90 bp GGCATGCTCCAGCTCCAGGGCGAAGGCGGTGAGGGGCACTTCCTCTaGCACGGGCATCACTGCCACCGTGGACAGGTTGACAGCCGGGTT +
Preference number: 5 (lower is better)
Translates to: GMLQLQGEGGEGHFL*HGHHCHRGQVDSRV
Trigger: AACCCGGCTGTCAACCTGTCCACGGTGGCAGTGATGCCCGTGTCAGAGGAAGTGCCCCTCACCGCCTTCGCCCTGGAGCTGGAGCATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS TCA 90 bp GCTTCCACCCTCCCTGCGGGCTGCCACAGCAGACACGTGGCGTGCTaGGGGCCTCTCATGAATGGAACGGGGGTCCAGAGTGTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: ASTLPAGCHSRHVAC*GPLMNGTGVQSVLG
Trigger: CCCAAGGACACTCTGGACCCCCGTTCCATTCATGAGAGGCCCTCAGCACGCCACGTGTCTGCTGTGGCAGCCCGCAGGGAGGGTGGAAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487228.1
CDS GCA 90 bp GGCACTGCCTGGGCCCCCTTGTGGGGCCGAAGGGTCAGGGTCACCTaGCCCGGGCTTCTCCAGCTCCTCCAAGATCTGTTTGCGAATGGA +
Preference number: 5 (lower is better)
Translates to: GTAWAPLWGRRVRVT*PGLLQLLQDLFANG
Trigger: TCCATTCGCAAACAGATCTTGGAGGAGCTGGAGAAGCCCGGGGCAGGTGACCCTGACCCTTCGGCCCCACAAGGGGGCCCAGGCAGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS GCA 90 bp CACAGAGGGTCTGAGGGCAGGACCCCGGGAGCAGCTCCTGGGTTCTaGAAAGCAACTTGGCTGTGGCCTGGTCTGCCTTGGCGCTGCCGA +
Preference number: 5 (lower is better)
Translates to: HRGSEGRTPGAAPGF*KATWLWPGLPWRCR
Trigger: TCGGCAGCGCCAAGGCAGACCAGGCCACAGCCAAGTTGCTTTGCAGAACCCAGGAGCTGCTCCCGGGGTCCTGCCCTCAGACCCTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS GCA 90 bp TGCTCTCCAGCATCCGCTCCAGCTGAAAGGCAGAGCCCACGTGTCTaGCAGCCGGGTGAGCCTGGGACTCGGGACAGGACGGAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: CSPASAPAERQSPRV*QPGEPGTRDRTELK
Trigger: CTTCAGCTCCGTCCTGTCCCGAGTCCCAGGCTCACCCGGCTGGCAGACACGTGGGCTCTGCCTTTCAGCTGGAGCGGATGCTGGAGAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS GCA 90 bp CTGTCTCCCGCCAGAACCTCTTTCACCACCACCTCGGTGCCGTCCTaGGCTTGGAGAGCAGAGTGGGTGCCGTCAGGTCTGGGGCTGCGA +
Preference number: 5 (lower is better)
Translates to: LSPARTSFTTTSVPS*AWRAEWVPSGLGLR
Trigger: TCGCAGCCCCAGACCTGACGGCACCCACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTGGCGGGAGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS CCA 90 bp TGGCCACGGAGCTCCCGGGGTGCTCGTCCGAGTGCAGGAAGACCCTaGCACGGTCACATGCCATCCCCAGATCAGAAGTGGCACTGCCTG +
Preference number: 5 (lower is better)
Translates to: WPRSSRGARPSAGRP*HGHMPSPDQKWHCL
Trigger: CAGGCAGTGCCACTTCTGATCTGGGGATGGCATGTGACCGTGCCAGGGTCTTCCTGCACTCGGACGAGCACCCCGGGAGCTCCGTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS CCA 90 bp CAAGCCACCCAGGCACTGAGGCAAGAGACAGAGGACACGAGCTTGTaGGGCCGAAGGGTCAGGGTCACCTGCCCCGGGCTTCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: QATQALRQETEDTSL*GRRVRVTCPGLLQL
Trigger: GAGCTGGAGAAGCCCGGGGCAGGTGACCCTGACCCTTCGGCCCCACAAGCTCGTGTCCTCTGTCTCTTGCCTCAGTGCCTGGGTGGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434090.2
CDS CCA 90 bp GGACGGGGGCAGAGCCTGCCTCTCCGAGCCCTGACGTGGGGGTTGTaGGGTCTCCTCTCCGCCATTACACCTTCTAGAGGCAGAAGACCC +
Preference number: 5 (lower is better)
Translates to: GRGQSLPLRALTWGL*GLLSAITPSRGRRP
Trigger: GGGTCTTCTGCCTCTAGAAGGTGTAATGGCGGAGAGGAGACCCCACAACCCCCACGTCAGGGCTCGGAGAGGCAGGCTCTGCCCCCGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS-3UTR CAA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCCCTGGTCTCCCTGCCTaGACACCACCGTGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAPGLPA*TPPCLQ
Trigger: CTGCAGGCACGGTGGTGTCAAGGCAGGGAGACCAGG...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGCCTGGTCTCCCTGCCTaGACACCACCGTGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWPGLPA*TPPCLQ
Trigger: CTGCAGGCACGGTGGTGTCAAGGCAGGGAGACCAGG...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTGCTCCTGCCGGCAGCTaGGCCAATTCTGAGTCCCGA +
Preference number: 5 (lower is better)
Translates to: AGASALGTVPRKTLHPGSAPAGS*ANSESR
Trigger: TCGGGACTCAGAATTGGCCAAGCTGCCGGCAGGAGC...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCGCCACCGTGGACAGGTaGACAGCCGGGTTCCCCAAG +
Preference number: 5 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAATVDR*TAGFPK
Trigger: CTTGGGGAACCCGGCTGTCAACCTGTCCACGGTGGC...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGCACTCCGCCAAGGCCTaGAGAACGCCCACCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWHSAKA*RTPTWA
Trigger: TGCCCAGGTGGGCGTTCTCAAGGCCTTGGCGGAGTG...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCGCAGGAGCCTCAGCCTaGGGGACAGTCCCACGGAAG +
Preference number: 5 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAAGASA*GTVPRK
Trigger: CTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS GCA 90 bp CGAACAGGATGCTGGCGTCCTGGTCTCCCTGCCTTGACACCACCGTaGCTGCAGGAACGTGCAGAAGCGCCACCCGGCCATCCAACAGAG +
Preference number: 5 (lower is better)
Translates to: RTGCWRPGLPALTPP*LQERAEAPPGHPTE
Trigger: CTCTGTTGGATGGCCGGGTGGCGCTTCTGCACGTTCCTGCAGGCACGGTGGTGTCAAGGCAGGGAGACCAGGACGCCAGCATCCTGTTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS GCA 90 bp TGTGGACGCTGTCTCCCGCCAGAACCTCTTTCACCACCACCTCGGTaGCGTCCTGCGCTTGGAGAGCAGAGTGGGTGCCGTCAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: CGRCLPPEPLSPPPR*RPALGEQSGCRQVW
Trigger: CCAGACCTGACGGCACCCACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTGGCGGGAGACAGCGTCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS CCA 90 bp TGTAGTTCCGCTCCTCAGAGTACAGGGCACCCACGAAGGCCCCGATaGACGTGCCTCCCACCATGTCCACAGGGATGCCGCACTCCGCCA +
Preference number: 5 (lower is better)
Translates to: CSSAPQSTGHPRRPR*TCLPPCPQGCRTPP
Trigger: TGGCGGAGTGCGGCATCCCTGTGGACATGGTGGGAGGCACGTCCATCGGGGCCTTCGTGGGTGCCCTGTACTCTGAGGAGCGGAACTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
ENST00000492278.5
CDS-3UTR CAA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGGCCAAAGACAGCACCTaGGTCCTCTTCCTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWAKDST*VLFLAR
Trigger: GCGGGCCAGGAAGAGGACCAAGGTGCTGTCTTTGGC...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCACGCTTTTCCTGGACTaGCTGGCCACGGAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEATLFLD*LATELP
Trigger: CGGGAGCTCCGTGGCCAGCAAGTCCAGGAAAAGCGT...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCCCCCTGCCTGTATATaGCTCGCCCGGCCTCCACCT +
Preference number: 5 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIPPACI*LARPPP
Trigger: AGGTGGAGGCCGGGCGAGCAATATACAGGCAGGGGG...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTCCCCCTGCCTGTATATaGCTCGCCCGGCCTCCACCT +
Preference number: 5 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLPPACI*LARPPP
Trigger: AGGTGGAGGCCGGGCGAGCAATATACAGGCAGGGGG...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCGCTCCTGCCGGCAGCTaGGCCAATTCTGAGTCCCGA +
Preference number: 5 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAAPAGS*ANSESR
Trigger: TCGGGACTCAGAATTGGCCAAGCTGCCGGCAGGAGC...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCTGGCGATCACCACTTTaGCCCCCATGGACCGGGCCA +
Preference number: 5 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASWRSPL*PPWTGP
Trigger: TGGCCCGGTCCATGGGGGCAAAAGTGGTGATCGCCA...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCTCCGTGAAGGAGGCGTaGGGACAGGTGAGGACCGCA +
Preference number: 5 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASSVKEA*GQVRTA
Trigger: TGCGGTCCTCACCTGTCCCAACGCCTCCTTCACGGA...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCTCCACCATGGCGGGCTaGGCGGGCTCAATGCGAGAC +
Preference number: 5 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCISTMAG*AGSMRD
Trigger: GTCTCGCATTGAGCCCGCCAAGCCCGCCATGGTGGA...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCGCAGGAGCCTCAGCCTaGGGGACAGTCCCACGGAAG +
Preference number: 5 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIAGASA*GTVPRK
Trigger: CTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS TCA 90 bp CTAGCCGTGGCCACCAGAGGCCCAAAGGGCAAGATGAAGGAGACGTaGGGCAGGGTCACGTTCACAAGCACAGGAAGGGCCCAGGAGCGC +
Preference number: 5 (lower is better)
Translates to: LAVATRGPKGKMKET*GRVTFTSTGRAQER
Trigger: GCGCTCCTGGGCCCTTCCTGTGCTTGTGAACGTGACCCTGCCTCACGTCTCCTTCATCTTGCCCTTTGGGCCTCTGGTGGCCACGGCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS GCA 90 bp TTCCTGGACTTGCTGGCCACGGAGCTCCCGGGGTGCTCGTCCGAGTaGAGGAAGACCCTGGCACGGTCACATGCCATCCCCAGATCAGAA +
Preference number: 5 (lower is better)
Translates to: FLDLLATELPGCSSE*RKTLARSHAIPRSE
Trigger: TTCTGATCTGGGGATGGCATGTGACCGTGCCAGGGTCTTCCTGCACTCGGACGAGCACCCCGGGAGCTCCGTGGCCAGCAAGTCCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS GCA 90 bp ACCATCACGCTTTTCCTGGACTTGCTGGCCACGGAGCTCCCGGGGTaGTCGTCCGAGTGCAGGAAGACCCTGGCACGGTCACATGCCATC +
Preference number: 5 (lower is better)
Translates to: TITLFLDLLATELPG*SSECRKTLARSHAI
Trigger: GATGGCATGTGACCGTGCCAGGGTCTTCCTGCACTCGGACGAGCACCCCGGGAGCTCCGTGGCCAGCAAGTCCAGGAAAAGCGTGATGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS GCA 90 bp CCAACACAGCATCAGGAGGTCACGCACGTCTCCACGGCTTCGTCTTaGGCCTCCACTCACCATCCACCATGGCGGGCTTGGCGGGCTCAA +
Preference number: 5 (lower is better)
Translates to: PTQHQEVTHVSTASS*ASTHHPPWRAWRAQ
Trigger: TTGAGCCCGCCAAGCCCGCCATGGTGGATGGTGAGTGGAGGCGCAAGACGAAGCCGTGGAGACGTGCGTGACCTCCTGATGCTGTGTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS GCA 90 bp TGGCAACTGTGGATAGGGGCTGCCTTGCCCAGGGCCCTCTCGGCCTaGGGCAGCCATGAAGACGTCTCCCAGGAGAATGTCCAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: WQLWIGAALPRALSA*GSHEDVSQENVQFC
Trigger: GCAGAACTGGACATTCTCCTGGGAGACGTCTTCATGGCTGCCGCAGGCCGAGAGGGCCCTGGGCAAGGCAGCCCCTATCCACAGTTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS GCA 90 bp GCCCTGGGGCCACATGTGGAATTTACAGAAGGCTTCCACCCTCCCTaGGGGCTGCCACAGCAGACACGTGGCGTGCTGAGGGCCTCTCAT +
Preference number: 5 (lower is better)
Translates to: ALGPHVEFTEGFHPP*GLPQQTRGVLRASH
Trigger: ATGAGAGGCCCTCAGCACGCCACGTGTCTGCTGTGGCAGCCCGCAGGGAGGGTGGAAGCCTTCTGTAAATTCCACATGTGGCCCCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487228.1
CDS CCA 90 bp GAGGACTCGTCCTCCAAGTCTGAGCCCTGCTGGGCTGAGGTGCTCTaGAAGTCTGCGTATGCATCCCTGGGGACGTCCAGCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: EDSSSKSEPCWAEVL*KSAYASLGTSSSSS
Trigger: GGAGGAGCTGCTGGACGTCCCCAGGGATGCATACGCAGACTTCCAGAGCACCTCAGCCCAGCAGGGCTCAGACTTGGAGGACGAGTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
ENST00000492278.5
CDS CCA 90 bp GCATGGAGCAGCCACAGCAGTCGGATGAGGCTGAGGAGTAGACGCTaGTGTCTGTGGGCGGCAAGCCACCCAGGCACTGAGGCAAGAGAC +
Preference number: 5 (lower is better)
Translates to: AWSSHSSRMRLRSRR*CLWAASHPGTEARD
Trigger: GTCTCTTGCCTCAGTGCCTGGGTGGCTTGCCGCCCACAGACACCAGCGTCTACTCCTCAGCCTCATCCGACTGCTGTGGCTGCTCCATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434090.2
CDS CCA 90 bp GTCCCTCTATCCTGCAGCAGATGGTGCCTTCAGGGCGTGGGTTTCTaGACAGAGCTGTGGGCTGGGGGCCGTGAGCATGAGCAGACTCCC +
Preference number: 5 (lower is better)
Translates to: VPLSCSRWCLQGVGF*TELWAGGREHEQTP
Trigger: GGGAGTCTGCTCATGCTCACGGCCCCCAGCCCACAGCTCTGTCCAGAAACCCACGCCCTGAAGGCACCATCTGCTGCAGGATAGAGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS-3UTR CAA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCGCCAAAGACAGCACCTaGGTCCTCTTCCTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIAKDST*VLFLAR
Trigger: GCGGGCCAGGAAGAGGACCAAGGTGCTGTCTTTGGC...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTCCTCCAAGATCTGTTaGCGAATGGAAGGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: AGASALGTVPRKTLHPGSSSKIC*RMEGAG
Trigger: CCCCGCGCCTTCCATTCGCAAACAGATCTTGGAGGA...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAACTGCCTGGGCCCCCTaGTGGGGCCGAAGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLTAWAP*WGRRVR
Trigger: CCTGACCCTTCGGCCCCACAAGGGGGCCCAGGCAGT...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCTGTGGGTACCTGCGCTaGATGGACGTGAGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEACGYLR*MDVRAP
Trigger: AGGAGCCCTCACGTCCATCAAGCGCAGGTACCCACA...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGTACATCTCCACCAGCTaGGGCAGGCTCCTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWYISTS*GRLLLE
Trigger: CTCCAGGAGGAGCCTGCCCAAGCTGGTGGAGATGTA...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTTCCGTGAAGGAGGCGTaGGGACAGGTGAGGACCGCA +
Preference number: 5 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLSVKEA*GQVRTA
Trigger: TGCGGTCCTCACCTGTCCCAACGCCTCCTTCACGGA...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS TCA 90 bp GTCTCCCAGGAGAATGTCCAGTTCTGCTGTGAGGAGGCCACTGGCTaGAGGCCCAAGCGCAGGGCCCTGGATGGAGCATGGAGGGTAGTG +
Preference number: 5 (lower is better)
Translates to: VSQENVQFCCEEATG*RPKRRALDGAWRVV
Trigger: CACTACCCTCCATGCTCCATCCAGGGCCCTGCGCTTGGGCCTTCAGCCAGTGGCCTCCTCACAGCAGAACTGGACATTCTCCTGGGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS GCA 90 bp GCAGTGAGGACTCGTCCTCCAAGTCTGAGCCCTGCTGGGCTGAGGTaGTCTGGAAGTCTGCGTATGCATCCCTGGGGACGTCCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: AVRTRPPSLSPAGLR*SGSLRMHPWGRPAA
Trigger: AGCTGCTGGACGTCCCCAGGGATGCATACGCAGACTTCCAGAGCACCTCAGCCCAGCAGGGCTCAGACTTGGAGGACGAGTCCTCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
ENST00000492278.5
CDS GCA 90 bp GGTCTCCTCTCCGCCATTACACCTTCTAGAGGCAGAAGACCCACATaGCCAGCTCGATGGGCAGCTGTGGGCACACGGCTGTGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: GLLSAITPSRGRRPT*PARWAAVGTRLCPG
Trigger: CCCAGGACACAGCCGTGTGCCCACAGCTGCCCATCGAGCTGGGCATGTGGGTCTTCTGCCTCTAGAAGGTGTAATGGCGGAGAGGAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS CCA 90 bp AGCCACAGCAGTCGGATGAGGCTGAGGAGTAGACGCTGGTGTCTGTaGGCGGCAAGCCACCCAGGCACTGAGGCAAGAGACAGAGGACAC +
Preference number: 5 (lower is better)
Translates to: SHSSRMRLRSRRWCL*AASHPGTEARDRGH
Trigger: GTGTCCTCTGTCTCTTGCCTCAGTGCCTGGGTGGCTTGCCGCCCACAGACACCAGCGTCTACTCCTCAGCCTCATCCGACTGCTGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434090.2
CDS CCA 90 bp TCCAGCGCGGCCTTCATCAAGGACGTCATGCCCTGGGGCCACATGTaGAATTTACAGAAGGCTTCCACCCTCCCTGCGGGCTGCCACAGC +
Preference number: 5 (lower is better)
Translates to: SSAAFIKDVMPWGHM*NLQKASTLPAGCHS
Trigger: GCTGTGGCAGCCCGCAGGGAGGGTGGAAGCCTTCTGTAAATTCCACATGTGGCCCCAGGGCATGACGTCCTTGATGAAGGCCGCGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487228.1
CDS-3UTR CAA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTCTCCACAAGGGTGTaGGGGAGTGTGGTCACCTTC +
Preference number: 5 (lower is better)
Translates to: AGASALGTVPRKTLHPGSFSTRV*GSVVTF
Trigger: GAAGGTGACCACACTCCCCAACACCCTTGTGGAGAA...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCTCCTCCAAGATCTGTTaGCGAATGGAAGGCGCGGGG +
Preference number: 5 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEASSKIC*RMEGAG
Trigger: CCCCGCGCCTTCCATTCGCAAACAGATCTTGGAGGA...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGACTGCCTGGGCCCCCTaGTGGGGCCGAAGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQTAWAP*WGRRVR
Trigger: CCTGACCCTTCGGCCCCACAAGGGGGCCCAGGCAGT...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGCCCTCGGCCCACTGCTaGGCCCGGATCCGCATCTGG +
Preference number: 5 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQPSAHC*ARIRIW
Trigger: CCAGATGCGGATCCGGGCCAAGCAGTGGGCCGAGGG...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp GCGGACGGAGACCGTTTTGTAAGGTGCAGCATGGCCGGTGATGATGTCCAGGATGGTGCCGTCCTGCGCTaGGAGAGCAGAGTGGGTGCC +
Preference number: 5 (lower is better)
Translates to: ADGDRFVRCSMAGDDVQDGAVLR*ESRVGA
Trigger: GGCACCCACTCTGCTCTCCAAGCGCAGGACGGCACC...ATCCTGGACATCATCACCGGCCATGCTGCACCTTACAAAACGGTCTCCGTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS TCA 90 bp CAACTGCAATCCCCGTCAGCATGGTGGACGGTGAACCTTCCTCCGTaGACCACAGTCCCCAAGAGTGCAGGGCGGTGCCCAGGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: QLQSPSAWWTVNLPP*TTVPKSAGRCPGRS
Trigger: ACTTCTGCCTGGGCACCGCCCTGCACTCTTGGGGACTGTGGTTCACGGAGGAAGGTTCACCGTCCACCATGCTGACGGGGATTGCAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406427.6
ENST00000434090.2
CDS GCA 90 bp GAGGAGCCCTCAGACAGTTTTGGGAAAGCCAGACTGGGGTGTCGATaGCGCAGTGAGGACTCGTCCTCCAAGTCTGAGCCCTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: EEPSDSFGKARLGCR*RSEDSSSKSEPCWA
Trigger: AGCCCAGCAGGGCTCAGACTTGGAGGACGAGTCCTCACTGCGGCATCGACACCCCAGTCTGGCTTTCCCAAAACTGTCTGAGGGCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
ENST00000492278.5
CDS GCA 90 bp ATGGTGGACGGTGAACCTTCCTCCGTGAACCACAGTCCCCAAGAGTaGAGGGCGGTGCCCAGGCAGAAGTCAGCCTGTGGGCTGTCATCT +
Preference number: 5 (lower is better)
Translates to: MVDGEPSSVNHSPQE*RAVPRQKSACGLSS
Trigger: AGATGACAGCCCACAGGCTGACTTCTGCCTGGGCACCGCCCTGCACTCTTGGGGACTGTGGTTCACGGAGGAAGGTTCACCGTCCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406427.6
ENST00000434090.2
CDS GCA 90 bp GAGACAGAGGACACGAGCTTGTGGGGCCGAAGGGTCAGGGTCACCTaGCCCGGGCTTCTCCAGCTCCTCCAAGATCTGTTTGCGAATGGA +
Preference number: 5 (lower is better)
Translates to: ETEDTSLWGRRVRVT*PGLLQLLQDLFANG
Trigger: TCCATTCGCAAACAGATCTTGGAGGAGCTGGAGAAGCCCGGGGCAGGTGACCCTGACCCTTCGGCCCCACAAGCTCGTGTCCTCTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434090.2
CDS CCA 90 bp AACGCAGAATCCTCTTGGCCAAAGACAGCACCTTGGTCCTCTTCCTaGCCCGCTGCCGGGGCAGGGCAGTGTTCTCCACAAGGGTGTTGG +
Preference number: 5 (lower is better)
Translates to: NAESSWPKTAPWSSS*PAAGAGQCSPQGCW
Trigger: CCAACACCCTTGTGGAGAACACTGCCCTGCCCCGGCAGCGGGCCAGGAAGAGGACCAAGGTGCTGTCTTTGGCCAAGAGGATTCTGCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000434090.2
ENST00000491019.2
CDS-3UTR CAA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCAGTCCCTGTTGGCCTaGACGGTGAAGATGAGAGGC +
Preference number: 5 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIQSLLA*TVKMRG
Trigger: GCCTCTCATCTTCACCGTCAAGGCCAACAGGGACTG...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp TCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGGAAGCTGCAGTCCCTGTaGGCCTTGACGGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: SSRAGTEAPRTWQEPQPWKLQSL*ALTVKM
Trigger: CATCTTCACCGTCAAGGCCAACAGGGACTGCAGCTT...CCAAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAGCCACCGTGGACAGGTaGACAGCCGGGTTCCCCAAG +
Preference number: 5 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLATVDR*TAGFPK
Trigger: CTTGGGGAACCCGGCTGTCAACCTGTCCACGGTGGC...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTACACTCCGCCAAGGCCTaGAGAACGCCCACCTGGGCA +
Preference number: 5 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLHSAKA*RTPTWA
Trigger: TGCCCAGGTGGGCGTTCTCAAGGCCTTGGCGGAGTG...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCGCCATGTTCAACACCTaGACTTTCGTGGCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAAMFNT*TFVAKG
Trigger: CCCCTTGGCCACGAAAGTCAAGGTGTTGAACATGGC...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCCAGATCTCGTTGAACTaGCCGAAGTCCAGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASQISLN*PKSRVL
Trigger: CAGCACCCTGGACTTCGGCAAGTTCAACGAGATCTG...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTACTTCGCAGATCTCGTaGAACTTGCCGAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: AGASALGTVPRKTLHPGSTSQIS*NLPKSR
Trigger: CCTGGACTTCGGCAAGTTCAACGAGATCTGCGAAGT...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS GCA 90 bp CAAACAGGGCCATATGCTGGAGCACATGCTGCCGGTGCCTGCGTGTaGATGTACACGCGTGTGCATGTTCTCGGAGCTCTGATGCCAGCC +
Preference number: 5 (lower is better)
Translates to: QTGPYAGAHAAGACV*MYTRVHVLGALMPA
Trigger: GGCTGGCATCAGAGCTCCGAGAACATGCACACGCGTGTACATGCACACGCAGGCACCGGCAGCATGTGCTCCAGCATATGGCCCTGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS CCA 90 bp GAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCTCTACCCGTCCTaGTCAGAGGAGCCCTCAGACAGTTTTGGGAAAGCCAGACTGGGG +
Preference number: 5 (lower is better)
Translates to: EDAASGLFSRGLYPS*SEEPSDSFGKARLG
Trigger: CCCCAGTCTGGCTTTCCCAAAACTGTCTGAGGGCTCCTCTGACCAGGACGGGTAGAGGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
ENST00000492278.5
CDS CCA 90 bp CCCTGGTTCTGTCTGGCTCCAGCTTTGCCCCAGCACATCACTTCGTaGGTCTTCCACAAGGACAAGGAGCGGGCAGACACTCCTCCCCTT +
Preference number: 5 (lower is better)
Translates to: PWFCLAPALPQHITS*VFHKDKERADTPPL
Trigger: AAGGGGAGGAGTGTCTGCCCGCTCCTTGTCCTTGTGGAAGACCCACGAAGTGATGTGCTGGGGCAAAGCTGGAGCCAGACAGAACCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS-3UTR CAA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTAAACGCAGAATCCTCTaGGCCAAAGACAGCACCTTG +
Preference number: 5 (lower is better)
Translates to: AGASALGTVPRKTLHPGSKRRIL*AKDSTL
Trigger: CAAGGTGCTGTCTTTGGCCAAGAGGATTCTGCGTTT...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCAGGGCAAAGTCGATTaGCCGCACGAAGGACGACAT +
Preference number: 5 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIQGKVD*PHEGRH
Trigger: ATGTCGTCCTTCGTGCGGCAAATCGACTTTGCCCTG...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCTACGTGCAGTCGGACTaGTCCCCCTGCCTGTATATT +
Preference number: 5 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEAYVQSD*SPCLYI
Trigger: AATATACAGGCAGGGGGACAAGTCCGACTGCACGTA...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp GGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCACTTCGCAGATCTCGTaGAACTTGCCGAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: GLGRSLSLGDSPTEDAASTSQIS*NLPKSR
Trigger: CCTGGACTTCGGCAAGTTCAACGAGATCTGCGAAGT...GGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS TCA 90 bp CTGAAGATGGCATCCGACTTCCTGCTGGCCAGGGTCTCATCCGTGTaGCTCTCTGAGTGCTGGGAGACCGTGGAGGGTATCTCTGCAACC +
Preference number: 5 (lower is better)
Translates to: LKMASDFLLARVSSV*LSECWETVEGISAT
Trigger: GGTTGCAGAGATACCCTCCACGGTCTCCCAGCACTCAGAGAGTCACACGGATGAGACCCTGGCCAGCAGGAAGTCGGATGCCATCTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS TCA 90 bp GCTCCCAGTTCCTCGACTTGGCCTTTGTTCTGCATGCTGCTGAGCTaGCAAACAGGGCCATATGCTGGAGCACATGCTGCCGGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: APSSSTWPLFCMLLS*QTGPYAGAHAAGAC
Trigger: GCAGGCACCGGCAGCATGTGCTCCAGCATATGGCCCTGTTTGTCAGCTCAGCAGCATGCAGAACAAAGGCCAAGTCGAGGAACTGGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS TCA 90 bp TGGCCTGGCCCCCAGCAAGCTCGACACCTGCAGGCTGTTAGTTTCTaGCTGTGGGCACAGATGGGGCTTAATTGCTCCCAGTTCCTCGAC +
Preference number: 5 (lower is better)
Translates to: WPGPQQARHLQAVSF*LWAQMGLNCSQFLD
Trigger: GTCGAGGAACTGGGAGCAATTAAGCCCCATCTGTGCCCACAGTCAGAAACTAACAGCCTGCAGGTGTCGAGCTTGCTGGGGGCCAGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS-3UTR CAA 90 bp CTCAAAAACTCCATGAAAAGCCGCAGCTGGAAGCCGGAGGATGGTGGACGGGATGCCAAAGACAGCACCTaGGTCCTCTTCCTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: LKNSMKSRSWKPEDGGRDAKDST*VLFLAR
Trigger: GCGGGCCAGGAAGAGGACCAAGGTGCTGTCTTTGGC...ATCCCGTCCACCATCCTCCGGCTTCCAGCTGCGGCTTTTCATGGAGTTTTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CAA 90 bp CTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTGGAGAGCAGAGTGGGTGCCGCCGGGTATTCCTTCTaGAAACGCAGAATCCTCTTG +
Preference number: 5 (lower is better)
Translates to: LFHHHLGAVLRLESRVGAAGYSF*KRRILL
Trigger: CAAGAGGATTCTGCGTTTCAAGAAGGAATACCCGGC...GGCACCCACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CAA 90 bp GCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTACAAAGACGATGTGTTaGCAAAGCTCCAGGAACAGC +
Preference number: 5 (lower is better)
Translates to: AGASALGTVPRKTLHPGSTKTMC*QSSRNS
Trigger: GCTGTTCCTGGAGCTTTGCAAACACATCGTCTTTGT...AGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAGCCTGGCTCTCAGCGTaGAAGAGCTCTGTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLAWLSA*KSSVVR
Trigger: CCTGACCACAGAGCTCTTCAACGCTGAGAGCCAGGC...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGACGCTTTTCCTGGACTaGCTGGCCACGGAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQTLFLD*LATELP
Trigger: CGGGAGCTCCGTGGCCAGCAAGTCCAGGAAAAGCGT...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGCTGGAAGACATGCTaGTACATCTCCACCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCIRWKTC*YISTSL
Trigger: CAAGCTGGTGGAGATGTACAAGCATGTCTTCCAGCG...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp AGGACTTGGCAGGAGCCTCAGCCTTGGGGACAGTCCCACGGAAGACGCTGCATCTCGATCTGCTGGTCCTaGAAGACGCTGAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: RTWQEPQPWGQSHGRRCISICWS*KTLKML
Trigger: CAGCATCTTCAGCGTCTTCAAGGACCAGCAGATCGA...GATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGCTGAGGCTCCTGCCAAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGTGGCGATCACCACTTTaGCCCCCATGGACCGGGCCA +
Preference number: 5 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQWRSPL*PPWTGP
Trigger: TGGCCCGGTCCATGGGGGCAAAAGTGGTGATCGCCA...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACAGCACTCGCGGGCTTCTaGCTCGGCCCCTGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTALAGF*LGPCWS
Trigger: CGACCAGCAGGGGCCGAGCAAGAAGCCCGCGAGTGC...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS GCA 90 bp AAGTCGATTTGCCGCACGAAGGACGACATCCTCTTCACCACAGTGTaGGCCACACCCAGGACGACGGTCGGCTGCTTCCGCATGATTTCA +
Preference number: 5 (lower is better)
Translates to: KSICRTKDDILFTTV*ATPRTTVGCFRMIS
Trigger: TGAAATCATGCGGAAGCAGCCGACCGTCGTCCTGGGTGTGGCGCACACTGTGGTGAAGAGGATGTCGTCCTTCGTGCGGCAAATCGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS GCA 90 bp TTGGCCTTTGTTCTGCATGCTGCTGAGCTGACAAACAGGGCCATATaGTGGAGCACATGCTGCCGGTGCCTGCGTGTGCATGTACACGCG +
Preference number: 5 (lower is better)
Translates to: LAFVLHAAELTNRAI*WSTCCRCLRVHVHA
Trigger: CGCGTGTACATGCACACGCAGGCACCGGCAGCATGTGCTCCAGCATATGGCCCTGTTTGTCAGCTCAGCAGCATGCAGAACAAAGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS CCA 90 bp TGGCCAGGGTCTCATCCGTGTGACTCTCTGAGTGCTGGGAGACCGTaGAGGGTATCTCTGCAACCATCACGCTTTTCCTGGACTTGCTGG +
Preference number: 5 (lower is better)
Translates to: WPGSHPCDSLSAGRP*RVSLQPSRFSWTCW
Trigger: CCAGCAAGTCCAGGAAAAGCGTGATGGTTGCAGAGATACCCTCCACGGTCTCCCAGCACTCAGAGAGTCACACGGATGAGACCCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS CCA 90 bp GCCTTTGTTCTGCATGCTGCTGAGCTGACAAACAGGGCCATATGCTaGAGCACATGCTGCCGGTGCCTGCGTGTGCATGTACACGCGTGT +
Preference number: 5 (lower is better)
Translates to: AFVLHAAELTNRAIC*STCCRCLRVHVHAC
Trigger: ACACGCGTGTACATGCACACGCAGGCACCGGCAGCATGTGCTCCAGCATATGGCCCTGTTTGTCAGCTCAGCAGCATGCAGAACAAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS-3UTR CAA 90 bp CTTCCAGCAGGGCAGGTACAGAGGCCCCTAGGACTTGGCAGGAGCCTCAGCCTTGCCGGGTATTCCTTCTaGAAACGCAGAATCCTCTTG +
Preference number: 5 (lower is better)
Translates to: LPAGQVQRPLGLGRSLSLAGYSF*KRRILL
Trigger: CAAGAGGATTCTGCGTTTCAAGAAGGAATACCCGGC...AAGGCTGAGGCTCCTGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp GCGGACGGAGACCGTTTTGTAAGGTGCAGCATGGCCGGTGATGATGTCCAGGATTTCTCCACAAGGGTGTaGGGGAGTGTGGTCACCTTC +
Preference number: 5 (lower is better)
Translates to: ADGDRFVRCSMAGDDVQDFSTRV*GSVVTF
Trigger: GAAGGTGACCACACTCCCCAACACCCTTGTGGAGAA...ATCCTGGACATCATCACCGGCCATGCTGCACCTTACAAAACGGTCTCCGTCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CAA 90 bp TGTCTCCCGCCAGAACCTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTGGAACAAAGACGATGTGTTaGCAAAGCTCCAGGAACAGC +
Preference number: 5 (lower is better)
Translates to: CLPPEPLSPPPRCRPALGTKTMC*QSSRNS
Trigger: GCTGTTCCTGGAGCTTTGCAAACACATCGTCTTTGT...TCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTGGCGGGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CAA 90 bp ACAGGGCCCTGTATGCAGGGCTGCTGGTACAAAGAAGAGGCCCAGAGAACCCTAGCCATGTTCAACACCTaGACTTTCGTGGCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: TGPCMQGCWYKEEAQRTLAMFNT*TFVAKG
Trigger: CCCCTTGGCCACGAAAGTCAAGGTGTTGAACATGGC...TAGGGTTCTCTGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS TCA 90 bp TGCACCACCCTCACCAGAGTTTCCGGATATTTCTCAAAAACTCCATaGAAAGCCGCAGCTGGAAGCCGGAGGATGGTGGACGGGATGGCC +
Preference number: 5 (lower is better)
Translates to: CTTLTRVSGYFSKTP*KAAAGSRRMVDGMA
Trigger: GGCCATCCCGTCCACCATCCTCCGGCTTCCAGCTGCGGCTTTTCATGGAGTTTTTGAGAAATATCCGGAAACTCTGGTGAGGGTGGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000434090.2
CDS-3UTR CAA 90 bp GCCTTGGGGACAGTCCCACGGAAGACGCTGCATCCGGGCTCTTTAGCAGAGGCCCTGTGCTTGTCGAAATaGTCTAAGCCTTCTGAACAT +
Preference number: 5 (lower is better)
Translates to: ALGTVPRKTLHPGSLAEALCLSK*SKPSEH
Trigger: ATGTTCAGAAGGCTTAGACAATTTCGACAAGCACAG...GGCCTCTGCTAAAGAGCCCGGATGCAGCGTCTTCCGTGGGACTGTCCCCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp TCCCGCCAGAACCTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTGGAGAGCCTGTGCTTGTCGAAATaGTCTAAGCCTTCTGAACAT +
Preference number: 5 (lower is better)
Translates to: SRQNLFHHHLGAVLRLESLCLSK*SKPSEH
Trigger: ATGTTCAGAAGGCTTAGACAATTTCGACAAGCACAG...GCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTGGCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CAA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGTTCTCCACAAGGGTGTaGGGGAGTGTGGTCACCTTC +
Preference number: 5 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQFSTRV*GSVVTF
Trigger: GAAGGTGACCACACTCCCCAACACCCTTGTGGAGAA...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGGTGAGCAGGTCCTTCTaGGCAGCTCTGAAGATGGCA +
Preference number: 5 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQVSRSF*AALKMA
Trigger: TGCCATCTTCAGAGCTGCCAAGAAGGACCTGCTCAC...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGAAGCTGCAGTCCCTGTaGGCCTTGACGGTGAAGATG +
Preference number: 5 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQKLQSL*ALTVKM
Trigger: CATCTTCACCGTCAAGGCCAACAGGGACTGCAGCTT...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS CCA 90 bp GTGGCCCAGGACCCGAACGTTTTTCAGCATGTACAGAACTTCCGATaGCAGGTGAGAATTCTTCACGTCAAACTCCGTGAGGTCGGCCTC +
Preference number: 5 (lower is better)
Translates to: VAQDPNVFQHVQNFR*QVRILHVKLREVGL
Trigger: GAGGCCGACCTCACGGAGTTTGACGTGAAGAATTCTCACCTGCCATCGGAAGTTCTGTACATGCTGAAAAACGTTCGGGTCCTGGGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000434090.2
ENST00000491019.2
CDS-3UTR CAA 90 bp CAAAAACTCCATGAAAAGCCGCAGCTGGAAGCCGGAGGATGGTGGACGGGATGGAAACGCAGAATCCTCTaGGCCAAAGACAGCACCTTG +
Preference number: 5 (lower is better)
Translates to: QKLHEKPQLEAGGWWTGWKRRIL*AKDSTL
Trigger: CAAGGTGCTGTCTTTGGCCAAGAGGATTCTGCGTTT...CCATCCCGTCCACCATCCTCCGGCTTCCAGCTGCGGCTTTTCATGGAGTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS-3UTR CAA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGAGGCGCCGTTTTATGTaGTCACTAGTCAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQRRRFM*SLVSSR
Trigger: CCTGCTGCTGACTAGTGACAACATAAAACGGCGCCT...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGCGCTGGAAGACATGCTaGTACATCTCCACCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQRWKTC*YISTSL
Trigger: CAAGCTGGTGGAGATGTACAAGCATGTCTTCCAGCG...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGTCGATCTGCTGGTCCTaGAAGACGCTGAAGATGCTG +
Preference number: 5 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQSICWS*KTLKML
Trigger: CAGCATCTTCAGCGTCTTCAAGGACCAGCAGATCGA...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS TCA 90 bp AGGACCCGAACGTTTTTCAGCATGTACAGAACTTCCGATGGCAGGTaGGAATTCTTCACGTCAAACTCCGTGAGGTCGGCCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RTRTFFSMYRTSDGR*EFFTSNSVRSASSR
Trigger: CCTGCTGGAGGCCGACCTCACGGAGTTTGACGTGAAGAATTCTCACCTGCCATCGGAAGTTCTGTACATGCTGAAAAACGTTCGGGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000434090.2
ENST00000491019.2
CDS CCA 90 bp AAGCTCGACACCTGCAGGCTGTTAGTTTCTGACTGTGGGCACAGATaGGGCTTAATTGCTCCCAGTTCCTCGACTTGGCCTTTGTTCTGC +
Preference number: 5 (lower is better)
Translates to: KLDTCRLLVSDCGHR*GLIAPSSSTWPLFC
Trigger: GCAGAACAAAGGCCAAGTCGAGGAACTGGGAGCAATTAAGCCCCATCTGTGCCCACAGTCAGAAACTAACAGCCTGCAGGTGTCGAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS-3UTR CAA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGAAACGCAGAATCCTCTaGGCCAAAGACAGCACCTTG +
Preference number: 5 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQKRRIL*AKDSTL
Trigger: CAAGGTGCTGTCTTTGGCCAAGAGGATTCTGCGTTT...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp CCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACACCTCACAGGGCAGGCCGGGTATTCCTTCTaGAAACGCAGAATCCTCTTG +
Preference number: 5 (lower is better)
Translates to: PLLKHHTAASGLPHLTGQAGYSF*KRRILL
Trigger: CAAGAGGATTCTGCGTTTCAAGAAGGAATACCCGGC...CTGCCCTGTGAGGTGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS TCA 90 bp TGCATGTACACGCGTGTGCATGTTCTCGGAGCTCTGATGCCAGCCTaGCATTTTCCCTTGGCATACTCTAAGGAAAACGTGTTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: CMYTRVHVLGALMPA*HFPLAYSKENVFQP
Trigger: GGGCTGGAACACGTTTTCCTTAGAGTATGCCAAGGGAAAATGTCAGGCTGGCATCAGAGCTCCGAGAACATGCACACGCGTGTACATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS-3UTR CAA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACATACGTGCAGTCGGACTaGTCCCCCTGCCTGTATATT +
Preference number: 5 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTYVQSD*SPCLYI
Trigger: AATATACAGGCAGGGGGACAAGTCCGACTGCACGTA...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS-3UTR CAA 90 bp ACAGTGAGATCCACCTTTATTGAAACATCACACGGCAGCATCAGGGCTCCCACAAGGCGCCGTTTTATGTaGTCACTAGTCAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: TVRSTFIETSHGSIRAPTRRRFM*SLVSSR
Trigger: CCTGCTGCTGACTAGTGACAACATAAAACGGCGCCT...TGTGGGAGCCCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS GCA 90 bp AAGCTAAGAGGAAAATGGGCAAAAGACAAAGAAGGCTATCCAAGGTaGTCGGCCTCACAGTTCATCAAGAAGACAGAATCAGAGCACAGG +
Preference number: 5 (lower is better)
Translates to: KLRGKWAKDKEGYPR*SASQFIKKTESEHR
Trigger: CCTGTGCTCTGATTCTGTCTTCTTGATGAACTGTGAGGCCGAGCACCTTGGATAGCCTTCTTTGTCTTTTGCCCATTTTCCTCTTAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434090.2
CDS CCA 72 bp CCGGGACGGAGGAGTGCCACCAAGCACCCCAGCTGCTaGAGCCTGGGCGTGGACGTGGGCGGGAGGGGAGGC +
Preference number: 6 (lower is better)
Translates to: PGRRSATKHPSC*SLGVDVGGRGG
Trigger: GCCTCCCCTCCCGCCCACGTCCACGCCCAGGCTCCAGCAGCTGGGGTGCTTGGTGGCACTCCTCCGTCCCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CCA 72 bp GCCCGAAGAACTGGGCGCGGTCCGGGGAGCTGGGCGTaGTCCGGACGCCCGTACTCACCGCACTCGCGGGCT +
Preference number: 6 (lower is better)
Translates to: ARRTGRGPGSWA*SGRPYSPHSRA
Trigger: AGCCCGCGAGTGCGGTGAGTACGGGCGTCCGGACCACGCCCAGCTCCCCGGACCGCGCCCAGTTCTTCGGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS GCA 72 bp CTTGGAGAGCAGAGTGGGTGCCGTCAGGTCTGGGGCTaGGACCGCGGGGCCTGGCGGAGGCTCAGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: LGEQSGCRQVWG*DRGAWRRLSPA
Trigger: GGCTGGGCTGAGCCTCCGCCAGGCCCCGCGGTCGCAGCCCCAGACCTGACGGCACCCACTCTGCTCTCCAAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS GCA 72 bp CCTCGGTGCCGTCCTGCGCTTGGAGAGCAGAGTGGGTaGCGTCAGGTCTGGGGCTGCGACCGCGGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: PRCRPALGEQSG*RQVWGCDRGAW
Trigger: CCAGGCCCCGCGGTCGCAGCCCCAGACCTGACGGCACCCACTCTGCTCTCCAAGCGCAGGACGGCACCGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS GCA 72 bp CGATGGCCGCCCTGTGCCTGCCCCCACTGCACCGGCTaGTTCCTAGCCGTGGCCACCAGAGGCCCAAAGGGC +
Preference number: 6 (lower is better)
Translates to: RWPPCACPHCTG*FLAVATRGPKG
Trigger: GCCCTTTGGGCCTCTGGTGGCCACGGCTAGGAAGCAGCCGGTGCAGTGGGGGCAGGCACAGGGCGGCCATCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS GCA 72 bp GCGGGCTGCCACAGCCTTCAGGCCCGTCCGGCCTCGTaGCTTCCTTCGCCCGAGTTGGGCTCAGGCAGGGGT +
Preference number: 6 (lower is better)
Translates to: AGCHSLQARPAS*LPSPELGSGRG
Trigger: ACCCCTGCCTGAGCCCAACTCGGGCGAAGGAAGGCACGAGGCCGGACGGGCCTGAAGGCTGTGGCAGCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS CCA 72 bp ACCACCTCGGTGCCGTCCTGCGCTTGGAGAGCAGAGTaGGTGCCGTCAGGTCTGGGGCTGCGACCGCGGGGC +
Preference number: 6 (lower is better)
Translates to: TTSVPSCAWRAE*VPSGLGLRPRG
Trigger: GCCCCGCGGTCGCAGCCCCAGACCTGACGGCACCCACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS CCA 72 bp GCCCTACCCTCGCAGGCTCTGCAGCGCCCCCATGCCTaGGGCCTCCTCGGCTTTGCCTGCTCAGCTCTGGGG +
Preference number: 6 (lower is better)
Translates to: ALPSQALQRPHA*GLLGFACSALG
Trigger: CCCCAGAGCTGAGCAGGCAAAGCCGAGGAGGCCCCAGGCATGGGGGCGCTGCAGAGCCTGCGAGGGTAGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487228.1
CDS CAA 90 bp CTGGGCGTGGTCCGGACGCCCGTACTCACCGCACTCGCGGGCTTCTaGCTCGGCCCCTGCTGGTCGCGGAGCATCTTCTCCAGCACGCCG +
Preference number: 6 (lower is better)
Translates to: LGVVRTPVLTALAGF*LGPCWSRSIFSSTP
Trigger: CGGCGTGCTGGAGAAGATGCTCCGCGACCAGCAGGGGCCGAGCAAGAAGCCCGCGAGTGCGGTGAGTACGGGCGTCCGGACCACGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS GCA 72 bp GTCAGCAGCAGGGTCGGGCCGATGGCGCTGAGGGCATaGTCCAGCTCCAGGGCGAAGGCGGTGAGGGGCACT +
Preference number: 6 (lower is better)
Translates to: VSSRVGPMALRA*SSSRAKAVRGT
Trigger: AGTGCCCCTCACCGCCTTCGCCCTGGAGCTGGAGCATGCCCTCAGCGCCATCGGCCCGACCCTGCTGCTGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS CCA 72 bp AGGACCGCACTCGCGGGCTTCTTGCTCGGCCCCTGCTaGTCGCGGAGCATCTTCTCCAGCACGCCGCTGCGG +
Preference number: 6 (lower is better)
Translates to: RTALAGFLLGPC*SRSIFSSTPLR
Trigger: CCGCAGCGGCGTGCTGGAGAAGATGCTCCGCGACCAGCAGGGGCCGAGCAAGAAGCCCGCGAGTGCGGTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
CDS CCA 72 bp CTCACCGCACTCGCGGGCTTCTTGCTCGGCCCCTGCTaGTCGCGGAGCATCTTCTCCAGCACGCCGCTGCGG +
Preference number: 6 (lower is better)
Translates to: LTALAGFLLGPC*SRSIFSSTPLR
Trigger: CCGCAGCGGCGTGCTGGAGAAGATGCTCCGCGACCAGCAGGGGCCGAGCAAGAAGCCCGCGAGTGCGGTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS TCA 72 bp GCACGGCCAGCTGGCCCACCATCTCCCCGGGGCGCGTaGGGAACAAGCAGGTGTCCTCCTGGCTGCCGATCT +
Preference number: 6 (lower is better)
Translates to: ARPAGPPSPRGA*GTSRCPPGCRS
Trigger: AGATCGGCAGCCAGGAGGACACCTGCTTGTTCCTCACGCGCCCCGGGGAGATGGTGGGCCAGCTGGCCGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS TCA 72 bp GGGGTCCAGAGTGTCCTTGGGCCCCACCCACGGTCCTaGGGCTTGGCGCCCTGGCTGGAGCCTCAGAGTGAG +
Preference number: 6 (lower is better)
Translates to: GVQSVLGPHPRS*GLAPWLEPQSE
Trigger: CTCACTCTGAGGCTCCAGCCAGGGCGCCAAGCCTCAGGACCGTGGGTGGGGCCCAAGGACACTCTGGACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487228.1
CDS GCA 72 bp GTGAGGACCGCACTCGCGGGCTTCTTGCTCGGCCCCTaGTGGTCGCGGAGCATCTTCTCCAGCACGCCGCTG +
Preference number: 6 (lower is better)
Translates to: VRTALAGFLLGP*WSRSIFSSTPL
Trigger: CAGCGGCGTGCTGGAGAAGATGCTCCGCGACCAGCAGGGGCCGAGCAAGAAGCCCGCGAGTGCGGTCCTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
CDS GCA 72 bp CTGCTGTGGGAACACGTGGTGCCCGGGACGGAGGAGTaGCACCAAGCACCCCAGCTGCTGGAGCCTGGGCGT +
Preference number: 6 (lower is better)
Translates to: LLWEHVVPGTEE*HQAPQLLEPGR
Trigger: ACGCCCAGGCTCCAGCAGCTGGGGTGCTTGGTGGCACTCCTCCGTCCCGGGCACCACGTGTTCCCACAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS GCA 72 bp CAGGGGCTGGGTGACCCGGGGTGGTCACAGTCCCACTaGTGTGGGAACACGTGGTGCCCGGGACGGAGGAGT +
Preference number: 6 (lower is better)
Translates to: QGLGDPGWSQSH*CGNTWCPGRRS
Trigger: ACTCCTCCGTCCCGGGCACCACGTGTTCCCACAGCAGTGGGACTGTGACCACCCCGGGTCACCCAGCCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CCA 72 bp TCCCGAACGGCATGCACCGTGGTCGCCCGGGCCTGGTaGGTCAGTGTCTCCACCACGCCGACGAGGTCTCCT +
Preference number: 6 (lower is better)
Translates to: SRTACTVVARAW*VSVSTTPTRSP
Trigger: AGGAGACCTCGTCGGCGTGGTGGAGACACTGACCCACCAGGCCCGGGCGACCACGGTGCATGCCGTTCGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS CCA 72 bp GAGTCCCGAACGGCATGCACCGTGGTCGCCCGGGCCTaGTGGGTCAGTGTCTCCACCACGCCGACGAGGTCT +
Preference number: 6 (lower is better)
Translates to: ESRTACTVVARA*WVSVSTTPTRS
Trigger: AGACCTCGTCGGCGTGGTGGAGACACTGACCCACCAGGCCCGGGCGACCACGGTGCATGCCGTTCGGGACTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS CCA 72 bp CCGGGGTGGTCACAGTCCCACTGCTGTGGGAACACGTaGTGCCCGGGACGGAGGAGTGCCACCAAGCACCCC +
Preference number: 6 (lower is better)
Translates to: PGWSQSHCCGNT*CPGRRSATKHP
Trigger: GGGGTGCTTGGTGGCACTCCTCCGTCCCGGGCACCACGTGTTCCCACAGCAGTGGGACTGTGACCACCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CAA 72 bp GTCCGGACGCCCGTACTCACCGCACTCGCGGGCTTCTaGCTCGGCCCCTGCTGGTCGCGGAGCATCTTCTCC +
Preference number: 6 (lower is better)
Translates to: VRTPVLTALAGF*LGPCWSRSIFS
Trigger: GGAGAAGATGCTCCGCGACCAGCAGGGGCCGAGCAAGAAGCCCGCGAGTGCGGTGAGTACGGGCGTCCGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS CAA 90 bp GTGCCTCCCACCATGTCCACAGGGATGCCGCACTCCGCCAAGGCCTaGAGAACGCCCACCTGGGCACAGCCTCTTGCTCCCCCTCCCCCA +
Preference number: 6 (lower is better)
Translates to: VPPTMSTGMPHSAKA*RTPTWAQPLAPPPP
Trigger: TGGGGGAGGGGGAGCAAGAGGCTGTGCCCAGGTGGGCGTTCTCAAGGCCTTGGCGGAGTGCGGCATCCCTGTGGACATGGTGGGAGGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
ENST00000492278.5
CDS CAA 90 bp TCCCGCCAGAACCTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTaGGAGAGCAGAGTGGGTGCCGTCAGGTCTGGGGCTGCGACCGCG +
Preference number: 6 (lower is better)
Translates to: SRQNLFHHHLGAVLR*ESRVGAVRSGAATA
Trigger: CGCGGTCGCAGCCCCAGACCTGACGGCACCCACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTGGCGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS GCA 72 bp TCAGTGTCCTGGATGCAGACCTCCAGCCGCCCGTCCTaGACCACACAGATGCTGGGGTCCGGCTCCCTGGGC +
Preference number: 6 (lower is better)
Translates to: SVSWMQTSSRPS*TTQMLGSGSLG
Trigger: GCCCAGGGAGCCGGACCCCAGCATCTGTGTGGTGCAGGACGGGCGGCTGGAGGTCTGCATCCAGGACACTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000434090.2
CDS GCA 72 bp TTGCTGGCCACGGAGCTCCCGGGGTGCTCGTCCGAGTaGAGGAAGACCCTGGCACGGTCACATGCCATCCCC +
Preference number: 6 (lower is better)
Translates to: LLATELPGCSSE*RKTLARSHAIP
Trigger: GGGGATGGCATGTGACCGTGCCAGGGTCTTCCTGCACTCGGACGAGCACCCCGGGAGCTCCGTGGCCAGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS GCA 72 bp GCCGGCAGCTTGGCCAATTCTGAGTCCCGAACGGCATaGACCGTGGTCGCCCGGGCCTGGTGGGTCAGTGTC +
Preference number: 6 (lower is better)
Translates to: AGSLANSESRTA*TVVARAWWVSV
Trigger: GACACTGACCCACCAGGCCCGGGCGACCACGGTGCATGCCGTTCGGGACTCAGAATTGGCCAAGCTGCCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS GCA 72 bp CCTGCTGGTCGCGGAGCATCTTCTCCAGCACGCCGCTaGGGCCCCAGATGTCAAACACCGTGCGCCCGTGCT +
Preference number: 6 (lower is better)
Translates to: PAGRGASSPARR*GPRCQTPCARA
Trigger: AGCACGGGCGCACGGTGTTTGACATCTGGGGCCGCAGCGGCGTGCTGGAGAAGATGCTCCGCGACCAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
ENST00000492278.5
CDS GCA 72 bp GGGTGGTCACAGTCCCACTGCTGTGGGAACACGTGGTaGCCGGGACGGAGGAGTGCCACCAAGCACCCCAGC +
Preference number: 6 (lower is better)
Translates to: GWSQSHCCGNTW*PGRRSATKHPS
Trigger: GCTGGGGTGCTTGGTGGCACTCCTCCGTCCCGGGCACCACGTGTTCCCACAGCAGTGGGACTGTGACCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS GCA 72 bp GCATCCGCTCCAGCTGAAAGGCAGAGCCCACGTGTCTaGCAGCCGGGTGAGCCTGGGACTCGGGACAGGACG +
Preference number: 6 (lower is better)
Translates to: ASAPAERQSPRV*QPGEPGTRDRT
Trigger: CGTCCTGTCCCGAGTCCCAGGCTCACCCGGCTGGCAGACACGTGGGCTCTGCCTTTCAGCTGGAGCGGATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS GCA 72 bp GTACTCACCGCACTCGCGGGCTTCTTGCTCGGCCCCTaGTGGTCGCGGAGCATCTTCTCCAGCACGCCGCTG +
Preference number: 6 (lower is better)
Translates to: VLTALAGFLLGP*WSRSIFSSTPL
Trigger: CAGCGGCGTGCTGGAGAAGATGCTCCGCGACCAGCAGGGGCCGAGCAAGAAGCCCGCGAGTGCGGTGAGTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS GCA 72 bp TCCGGACGCCCGTACTCACCGCACTCGCGGGCTTCTTaGTCGGCCCCTGCTGGTCGCGGAGCATCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: SGRPYSPHSRAS*SAPAGRGASSP
Trigger: TGGAGAAGATGCTCCGCGACCAGCAGGGGCCGAGCAAGAAGCCCGCGAGTGCGGTGAGTACGGGCGTCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS GCA 72 bp ACAGTGTCCTGGATGCAGACCTCCAGCCGCCCGTCCTaGACCACACAGATGCTGGGGTCCGGCTCCCTGGGC +
Preference number: 6 (lower is better)
Translates to: TVSWMQTSSRPS*TTQMLGSGSLG
Trigger: GCCCAGGGAGCCGGACCCCAGCATCTGTGTGGTGCAGGACGGGCGGCTGGAGGTCTGCATCCAGGACACTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS CCA 72 bp CAGCCGGGTTCCCCAAGTCCCACTTGCTGCCCTCCGTaGGGAGCCCAAGCTGGTGGCCTGTCACAGGTCCCT +
Preference number: 6 (lower is better)
Translates to: QPGSPSPTCCPP*GAQAGGLSQVP
Trigger: AGGGACCTGTGACAGGCCACCAGCTTGGGCTCCCCACGGAGGGCAGCAAGTGGGACTTGGGGAACCCGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS CCA 72 bp AGTGCCCGGACCGGGCCCCAGAGACAGCTCAGCTACTaGGGGGAGGACACTGGCAGAGGGTACGTGGGCAAG +
Preference number: 6 (lower is better)
Translates to: SARTGPQRQLSY*GEDTGRGYVGK
Trigger: CTTGCCCACGTACCCTCTGCCAGTGTCCTCCCCCCAGTAGCTGAGCTGTCTCTGGGGCCCGGTCCGGGCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CCA 72 bp AGAGTGTCCTTGGGCCCCACCCACGGTCCTGAGGCTTaGCGCCCTGGCTGGAGCCTCAGAGTGAGCAGAGGC +
Preference number: 6 (lower is better)
Translates to: RVSLGPTHGPEA*RPGWSLRVSRG
Trigger: GCCTCTGCTCACTCTGAGGCTCCAGCCAGGGCGCCAAGCCTCAGGACCGTGGGTGGGGCCCAAGGACACTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487228.1
CDS CAA 72 bp GCGTTGGGACAGGTGAGGACCGCACTCGCGGGCTTCTaGCTCGGCCCCTGCTGGTCGCGGAGCATCTTCTCC +
Preference number: 6 (lower is better)
Translates to: ALGQVRTALAGF*LGPCWSRSIFS
Trigger: GGAGAAGATGCTCCGCGACCAGCAGGGGCCGAGCAAGAAGCCCGCGAGTGCGGTCCTCACCTGTCCCAACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
CDS TCA 72 bp AGTCGGCCTGGCGCACGCAGCGCTGGGTCCAGGGTGTaGGCGTGCCATCTGCCTGGTAGAGCACGATCCTGT +
Preference number: 6 (lower is better)
Translates to: SRPGARSAGSRV*ACHLPGRARSC
Trigger: ACAGGATCGTGCTCTACCAGGCAGATGGCACGCTCACACCCTGGACCCAGCGCTGCGTGCGCCAGGCCGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
CDS TCA 72 bp CCATGTCCACAGGGATGCCGCACTCCGCCAAGGCCTTaGGAACGCCCACCTGGGCACAGCCTCTTGCTCCCC +
Preference number: 6 (lower is better)
Translates to: PCPQGCRTPPRP*ERPPGHSLLLP
Trigger: GGGGAGCAAGAGGCTGTGCCCAGGTGGGCGTTCTCAAGGCCTTGGCGGAGTGCGGCATCCCTGTGGACATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
ENST00000492278.5
CDS GCA 72 bp TGCTGGCGTCCTGGTCTCCCTGCCTTGACACCACCGTaGCTGCAGGAACGTGCAGAAGCGCCACCCGGCCAT +
Preference number: 6 (lower is better)
Translates to: CWRPGLPALTPP*LQERAEAPPGH
Trigger: ATGGCCGGGTGGCGCTTCTGCACGTTCCTGCAGGCACGGTGGTGTCAAGGCAGGGAGACCAGGACGCCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS GCA 72 bp CAGAGTACAGGGCACCCACGAAGGCCCCGATGGACGTaGCTCCCACCATGTCCACAGGGATGCCGCACTCCG +
Preference number: 6 (lower is better)
Translates to: QSTGHPRRPRWT*LPPCPQGCRTP
Trigger: CGGAGTGCGGCATCCCTGTGGACATGGTGGGAGGCACGTCCATCGGGGCCTTCGTGGGTGCCCTGTACTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
ENST00000492278.5
CDS GCA 72 bp CCAGCACGCCGCTGCGGCCCCAGATGTCAAACACCGTaGGCCCGTGCTGGTAGCCCACTTCGCAGATCTCGT +
Preference number: 6 (lower is better)
Translates to: PARRCGPRCQTP*ARAGSPLRRSR
Trigger: ACGAGATCTGCGAAGTGGGCTACCAGCACGGGCGCACGGTGTTTGACATCTGGGGCCGCAGCGGCGTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
CDS CCA 72 bp GCTCCTCAGAGTACAGGGCACCCACGAAGGCCCCGATaGACGTGCCTCCCACCATGTCCACAGGGATGCCGC +
Preference number: 6 (lower is better)
Translates to: APQSTGHPRRPR*TCLPPCPQGCR
Trigger: GCGGCATCCCTGTGGACATGGTGGGAGGCACGTCCATCGGGGCCTTCGTGGGTGCCCTGTACTCTGAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
ENST00000492278.5
CDS CCA 72 bp GCCTCTCATGAATGGAACGGGGGTCCAGAGTGTCCTTaGGCCCCACCCACGGTCCTGAGGCTTGGCGCCCTG +
Preference number: 6 (lower is better)
Translates to: ASHEWNGGPECP*APPTVLRLGAL
Trigger: CAGGGCGCCAAGCCTCAGGACCGTGGGTGGGGCCCAAGGACACTCTGGACCCCCGTTCCATTCATGAGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487228.1
CDS CAA 90 bp TGTGGGTACCTGCGCTTGATGGACGTGAGGGCTCCTGCCGGCAGCTaGGCCAATTCTGAGTCCCGAACGGCATGCACCGTGGTCGCCCGG +
Preference number: 6 (lower is better)
Translates to: CGYLRLMDVRAPAGS*ANSESRTACTVVAR
Trigger: CCGGGCGACCACGGTGCATGCCGTTCGGGACTCAGAATTGGCCAAGCTGCCGGCAGGAGCCCTCACGTCCATCAAGCGCAGGTACCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS CAA 90 bp ACTGCCACCGTGGACAGGTTGACAGCCGGGTTCCCCAAGTCCCACTaGCTGCCCTCCGTGGGGAGCCCAAGCTGGTGGCCTGTCACAGGT +
Preference number: 6 (lower is better)
Translates to: TATVDRLTAGFPKSH*LPSVGSPSWWPVTG
Trigger: ACCTGTGACAGGCCACCAGCTTGGGCTCCCCACGGAGGGCAGCAAGTGGGACTTGGGGAACCCGGCTGTCAACCTGTCCACGGTGGCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS CAA 90 bp AGGGGCACTTCCTCTGACACGGGCATCACTGCCACCGTGGACAGGTaGACAGCCGGGTTCCCCAAGTCCCACTTGCTGCCCTCCGTGGGG +
Preference number: 6 (lower is better)
Translates to: RGTSSDTGITATVDR*TAGFPKSHLLPSVG
Trigger: CCCCACGGAGGGCAGCAAGTGGGACTTGGGGAACCCGGCTGTCAACCTGTCCACGGTGGCAGTGATGCCCGTGTCAGAGGAAGTGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS TCA 72 bp CAGCTCCAGGGCGAAGGCGGTGAGGGGCACTTCCTCTaGCACGGGCATCACTGCCACCGTGGACAGGTTGAC +
Preference number: 6 (lower is better)
Translates to: QLQGEGGEGHFL*HGHHCHRGQVD
Trigger: GTCAACCTGTCCACGGTGGCAGTGATGCCCGTGTCAGAGGAAGTGCCCCTCACCGCCTTCGCCCTGGAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS TCA 72 bp ACGCTGGTGTCTGTGGGCGGCAAGCCACCCAGGCACTaGGGCAAGAGACAGAGGACACGAGCTTGTGGGGCC +
Preference number: 6 (lower is better)
Translates to: TLVSVGGKPPRH*GKRQRTRACGA
Trigger: GGCCCCACAAGCTCGTGTCCTCTGTCTCTTGCCTCAGTGCCTGGGTGGCTTGCCGCCCACAGACACCAGCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434090.2
CDS TCA 72 bp GCCGCCGCGGGTGGCCGGCACTCACGCAGATCTCGTTaGACTTGCCGAAGTCCAGGGTGCTGTAGCTGTCGA +
Preference number: 6 (lower is better)
Translates to: AAAGGRHSRRSR*TCRSPGCCSCR
Trigger: TCGACAGCTACAGCACCCTGGACTTCGGCAAGTTCAACGAGATCTGCGTGAGTGCCGGCCACCCGCGGCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS TCA 72 bp GCCACAGCAGACACGTGGCGTGCTGAGGGCCTCTCATaGATGGAACGGGGGTCCAGAGTGTCCTTGGGCCCC +
Preference number: 6 (lower is better)
Translates to: ATADTWRAEGLS*MERGSRVSLGP
Trigger: GGGGCCCAAGGACACTCTGGACCCCCGTTCCATTCATGAGAGGCCCTCAGCACGCCACGTGTCTGCTGTGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487228.1
CDS TCA 72 bp CTCCCTGCGGGCTGCCACAGCAGACACGTGGCGTGCTaGGGGCCTCTCATGAATGGAACGGGGGTCCAGAGT +
Preference number: 6 (lower is better)
Translates to: LPAGCHSRHVAC*GPLMNGTGVQS
Trigger: ACTCTGGACCCCCGTTCCATTCATGAGAGGCCCTCAGCACGCCACGTGTCTGCTGTGGCAGCCCGCAGGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487228.1
CDS GCA 72 bp CTTTTCCTGGACTTGCTGGCCACGGAGCTCCCGGGGTaGTCGTCCGAGTGCAGGAAGACCCTGGCACGGTCA +
Preference number: 6 (lower is better)
Translates to: LFLDLLATELPG*SSECRKTLARS
Trigger: TGACCGTGCCAGGGTCTTCCTGCACTCGGACGAGCACCCCGGGAGCTCCGTGGCCAGCAAGTCCAGGAAAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS GCA 72 bp TGCCGCACGAAGGACGACATCCTCTTCACCACAGTGTaGGCCACACCCAGGACGACGGTCGGCTGCTTCCGC +
Preference number: 6 (lower is better)
Translates to: CRTKDDILFTTV*ATPRTTVGCFR
Trigger: GCGGAAGCAGCCGACCGTCGTCCTGGGTGTGGCGCACACTGTGGTGAAGAGGATGTCGTCCTTCGTGCGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS GCA 72 bp CACGCAGCGCTGGGTCCAGGGTGTGAGCGTGCCATCTaGCTGGTAGAGCACGATCCTGTGGGTGTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: HAALGPGCERAI*LVEHDPVGVLL
Trigger: CAGGAGGACACCCACAGGATCGTGCTCTACCAGGCAGATGGCACGCTCACACCCTGGACCCAGCGCTGCGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
CDS CCA 72 bp GCTTGGCCAATTCTGAGTCCCGAACGGCATGCACCGTaGTCGCCCGGGCCTGGTGGGTCAGTGTCTCCACCA +
Preference number: 6 (lower is better)
Translates to: AWPILSPERHAP*SPGPGGSVSPP
Trigger: TGGTGGAGACACTGACCCACCAGGCCCGGGCGACCACGGTGCATGCCGTTCGGGACTCAGAATTGGCCAAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS CCA 72 bp TGGTGCCTTCAGGGCGTGGGTTTCTGGACAGAGCTGTaGGCTGGGGGCCGTGAGCATGAGCAGACTCCCCAC +
Preference number: 6 (lower is better)
Translates to: WCLQGVGFWTEL*AGGREHEQTPH
Trigger: GTGGGGAGTCTGCTCATGCTCACGGCCCCCAGCCCACAGCTCTGTCCAGAAACCCACGCCCTGAAGGCACCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CCA 72 bp ACCTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTTaGAGAGCAGAGTGGGTGCCGTCAGGTCTGGGGCTG +
Preference number: 6 (lower is better)
Translates to: TSFTTTSVPSCA*RAEWVPSGLGL
Trigger: CAGCCCCAGACCTGACGGCACCCACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS CCA 72 bp CAGCAGACACGTGGCGTGCTGAGGGCCTCTCATGAATaGAACGGGGGTCCAGAGTGTCCTTGGGCCCCACCC +
Preference number: 6 (lower is better)
Translates to: QQTRGVLRASHE*NGGPECPWAPP
Trigger: GGGTGGGGCCCAAGGACACTCTGGACCCCCGTTCCATTCATGAGAGGCCCTCAGCACGCCACGTGTCTGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487228.1
CDS CAA 72 bp ACCATGTCCACAGGGATGCCGCACTCCGCCAAGGCCTaGAGAACGCCCACCTGGGCACAGCCTCTTGCTCCC +
Preference number: 6 (lower is better)
Translates to: TMSTGMPHSAKA*RTPTWAQPLAP
Trigger: GGGAGCAAGAGGCTGTGCCCAGGTGGGCGTTCTCAAGGCCTTGGCGGAGTGCGGCATCCCTGTGGACATGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
ENST00000492278.5
CDS CAA 72 bp GACCCCGGGAGCAGCTCCTGGGTTCTGCAAAGCAACTaGGCTGTGGCCTGGTCTGCCTTGGCGCTGCCGAAG +
Preference number: 6 (lower is better)
Translates to: DPGSSSWVLQSN*AVAWSALALPK
Trigger: CTTCGGCAGCGCCAAGGCAGACCAGGCCACAGCCAAGTTGCTTTGCAGAACCCAGGAGCTGCTCCCGGGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS TCA 72 bp CACGAACAGGATGCTGGCGTCCTGGTCTCCCTGCCTTaGCACCACCGTGCCTGCAGGAACGTGCAGAAGCGC +
Preference number: 6 (lower is better)
Translates to: HEQDAGVLVSLP*HHRACRNVQKR
Trigger: GCGCTTCTGCACGTTCCTGCAGGCACGGTGGTGTCAAGGCAGGGAGACCAGGACGCCAGCATCCTGTTCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS TCA 72 bp CCTCTGACACGGGCATCACTGCCACCGTGGACAGGTTaGCAGCCGGGTTCCCCAAGTCCCACTTGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: PLTRASLPPWTG*QPGSPSPTCCP
Trigger: AGGGCAGCAAGTGGGACTTGGGGAACCCGGCTGTCAACCTGTCCACGGTGGCAGTGATGCCCGTGTCAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS TCA 72 bp TCCCCGTCAGCATGGTGGACGGTGAACCTTCCTCCGTaGACCACAGTCCCCAAGAGTGCAGGGCGGTGCCCA +
Preference number: 6 (lower is better)
Translates to: SPSAWWTVNLPP*TTVPKSAGRCP
Trigger: TGGGCACCGCCCTGCACTCTTGGGGACTGTGGTTCACGGAGGAAGGTTCACCGTCCACCATGCTGACGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000406427.6
ENST00000434090.2
CDS TCA 72 bp TGCCTTGCCCAGGGCCCTCTCGGCCTGCGGCAGCCATaGAGACGTCTCCCAGGAGAATGTCCAGTTCTGCTG +
Preference number: 6 (lower is better)
Translates to: CLAQGPLGLRQP*RRLPGECPVLL
Trigger: CAGCAGAACTGGACATTCTCCTGGGAGACGTCTTCATGGCTGCCGCAGGCCGAGAGGGCCCTGGGCAAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS GCA 72 bp CTCGTCCGAGTGCAGGAAGACCCTGGCACGGTCACATaGCATCCCCAGATCAGAAGTGGCACTGCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: LVRVQEDPGTVT*HPQIRSGTAWA
Trigger: GGCCCAGGCAGTGCCACTTCTGATCTGGGGATGGCATGTGACCGTGCCAGGGTCTTCCTGCACTCGGACGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS GCA 72 bp GGTGAACCTTCCTCCGTGAACCACAGTCCCCAAGAGTaGAGGGCGGTGCCCAGGCAGAAGTCAGCCTGTGGG +
Preference number: 6 (lower is better)
Translates to: GEPSSVNHSPQE*RAVPRQKSACG
Trigger: CCCACAGGCTGACTTCTGCCTGGGCACCGCCCTGCACTCTTGGGGACTGTGGTTCACGGAGGAAGGTTCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000406427.6
ENST00000434090.2
CDS GCA 72 bp GCCCCAGCCAGCTGGACAGCCGGTACTCGTGAACACTaGAGCACGCAGAGGGAGTACCTCACTACTCCGCAG +
Preference number: 6 (lower is better)
Translates to: APASWTAGTREH*STQREYLTTPQ
Trigger: CTGCGGAGTAGTGAGGTACTCCCTCTGCGTGCTGCAGTGTTCACGAGTACCGGCTGTCCAGCTGGCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469998.1
CDS GCA 72 bp CATCAGGAGGTCACGCACGTCTCCACGGCTTCGTCTTaGGCCTCCACTCACCATCCACCATGGCGGGCTTGG +
Preference number: 6 (lower is better)
Translates to: HQEVTHVSTASS*ASTHHPPWRAW
Trigger: CCAAGCCCGCCATGGTGGATGGTGAGTGGAGGCGCAAGACGAAGCCGTGGAGACGTGCGTGACCTCCTGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS GCA 72 bp AAAGCAACTTGGCTGTGGCCTGGTCTGCCTTGGCGCTaGCGAAGCTCTGACGGCAGGGGTCCATCCGTCCAC +
Preference number: 6 (lower is better)
Translates to: KATWLWPGLPWR*RSSDGRGPSVH
Trigger: GTGGACGGATGGACCCCTGCCGTCAGAGCTTCGGCAGCGCCAAGGCAGACCAGGCCACAGCCAAGTTGCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS GCA 72 bp GCCAGAACCTCTTTCACCACCACCTCGGTGCCGTCCTaGGCTTGGAGAGCAGAGTGGGTGCCGTCAGGTCTG +
Preference number: 6 (lower is better)
Translates to: ARTSFTTTSVPS*AWRAEWVPSGL
Trigger: CAGACCTGACGGCACCCACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS GCA 72 bp TGTCTCCCGCCAGAACCTCTTTCACCACCACCTCGGTaGCGTCCTGCGCTTGGAGAGCAGAGTGGGTGCCGT +
Preference number: 6 (lower is better)
Translates to: CLPPEPLSPPPR*RPALGEQSGCR
Trigger: ACGGCACCCACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTTCTGGCGGGAGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS CCA 72 bp AGCTCCCGGGGTGCTCGTCCGAGTGCAGGAAGACCCTaGCACGGTCACATGCCATCCCCAGATCAGAAGTGG +
Preference number: 6 (lower is better)
Translates to: SSRGARPSAGRP*HGHMPSPDQKW
Trigger: CCACTTCTGATCTGGGGATGGCATGTGACCGTGCCAGGGTCTTCCTGCACTCGGACGAGCACCCCGGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS CCA 72 bp AGCCACAGCAGTCGGATGAGGCTGAGGAGTAGACGCTaGTGTCTGTGGGCGGCAAGCCACCCAGGCACTGAG +
Preference number: 6 (lower is better)
Translates to: SHSSRMRLRSRR*CLWAASHPGTE
Trigger: CTCAGTGCCTGGGTGGCTTGCCGCCCACAGACACCAGCGTCTACTCCTCAGCCTCATCCGACTGCTGTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434090.2
CDS CCA 72 bp TCCTGCAGCAGATGGTGCCTTCAGGGCGTGGGTTTCTaGACAGAGCTGTGGGCTGGGGGCCGTGAGCATGAG +
Preference number: 6 (lower is better)
Translates to: SCSRWCLQGVGF*TELWAGGREHE
Trigger: CTCATGCTCACGGCCCCCAGCCCACAGCTCTGTCCAGAAACCCACGCCCTGAAGGCACCATCTGCTGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CCA 72 bp GCAGAAGACCCACATGCCCAGCTCGATGGGCAGCTGTaGGCACACGGCTGTGTCCTGGGCCTTTCTGACCGT +
Preference number: 6 (lower is better)
Translates to: AEDPHAQLDGQL*AHGCVLGLSDR
Trigger: ACGGTCAGAAAGGCCCAGGACACAGCCGTGTGCCCACAGCTGCCCATCGAGCTGGGCATGTGGGTCTTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS CCA 72 bp CAGAGCCTGCCTCTCCGAGCCCTGACGTGGGGGTTGTaGGGTCTCCTCTCCGCCATTACACCTTCTAGAGGC +
Preference number: 6 (lower is better)
Translates to: QSLPLRALTWGL*GLLSAITPSRG
Trigger: GCCTCTAGAAGGTGTAATGGCGGAGAGGAGACCCCACAACCCCCACGTCAGGGCTCGGAGAGGCAGGCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS CAA 72 bp CTGCGCTTGATGGACGTGAGGGCTCCTGCCGGCAGCTaGGCCAATTCTGAGTCCCGAACGGCATGCACCGTG +
Preference number: 6 (lower is better)
Translates to: LRLMDVRAPAGS*ANSESRTACTV
Trigger: CACGGTGCATGCCGTTCGGGACTCAGAATTGGCCAAGCTGCCGGCAGGAGCCCTCACGTCCATCAAGCGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS CAA 72 bp TCCTCTGACACGGGCATCACTGCCACCGTGGACAGGTaGACAGCCGGGTTCCCCAAGTCCCACTTGCTGCCC +
Preference number: 6 (lower is better)
Translates to: SSDTGITATVDR*TAGFPKSHLLP
Trigger: GGGCAGCAAGTGGGACTTGGGGAACCCGGCTGTCAACCTGTCCACGGTGGCAGTGATGCCCGTGTCAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS CAA 72 bp CTGTCCAGGGCAGCGGAGCCAAGGCGCCGTTTTATGTaGTCACTAGTCAGCAGCAGGGTCGGGCCGATGGCG +
Preference number: 6 (lower is better)
Translates to: LSRAAEPRRRFM*SLVSSRVGPMA
Trigger: CGCCATCGGCCCGACCCTGCTGCTGACTAGTGACAACATAAAACGGCGCCTTGGCTCCGCTGCCCTGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS CAA 72 bp TCTGAGTGTCGGTCCGGGGGCCGCTGGAAGACATGCTaGTACATCTCCACCTGGGGGAGGAGCCGTCAGGCA +
Preference number: 6 (lower is better)
Translates to: SECRSGGRWKTC*YISTWGRSRQA
Trigger: TGCCTGACGGCTCCTCCCCCAGGTGGAGATGTACAAGCATGTCTTCCAGCGGCCCCCGGACCGACACTCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CAA 72 bp GGGCAGAGCCTGCCTCTCCGAGCCCTGACGTGGGGGTaGTGGGGTCTCCTCTCCGCCATTACACCTTCTAGA +
Preference number: 6 (lower is better)
Translates to: GQSLPLRALTWG*WGLLSAITPSR
Trigger: TCTAGAAGGTGTAATGGCGGAGAGGAGACCCCACAACCCCCACGTCAGGGCTCGGAGAGGCAGGCTCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS CAA 72 bp AACCTCTTTCACCACCACCTCGGTGCCGTCCTGCGCTaGGAGAGCAGAGTGGGTGCCGTCAGGTCTGGGGCT +
Preference number: 6 (lower is better)
Translates to: NLFHHHLGAVLR*ESRVGAVRSGA
Trigger: AGCCCCAGACCTGACGGCACCCACTCTGCTCTCCAAGCGCAGGACGGCACCGAGGTGGTGGTGAAAGAGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491019.2
CDS CAA 90 bp TGCTCGCCCGGCCTCCACCTCCACCCAGTCCAGGGCAAAGTCGATTaGCCGCACGAAGGACGACATCCTCTTCACCACAGTGTGCGCCAC +
Preference number: 6 (lower is better)
Translates to: CSPGLHLHPVQGKVD*PHEGRHPLHHSVRH
Trigger: GTGGCGCACACTGTGGTGAAGAGGATGTCGTCCTTCGTGCGGCAAATCGACTTTGCCCTGGACTGGGTGGAGGTGGAGGCCGGGCGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS CAA 90 bp CGCAGGGCCCTGGATGGAGCATGGAGGGTAGTGGACCCGCCCTTCTaGTCCTGCGGCCCCTCCAACAAGCAGCCTTCATTCCCATTTCCC +
Preference number: 6 (lower is better)
Translates to: RRALDGAWRVVDPPF*SCGPSNKQPSFPFP
Trigger: GGGAAATGGGAATGAAGGCTGCTTGTTGGAGGGGCCGCAGGACAAGAAGGGCGGGTCCACTACCCTCCATGCTCCATCCAGGGCCCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS TCA 72 bp TCCTGCTGCCCCAGCCAGCTGGACAGCCGGTACTCGTaGACACTGCAGCACGCAGAGGGAGTACCTCACTAC +
Preference number: 6 (lower is better)
Translates to: SCCPSQLDSRYS*TLQHAEGVPHY
Trigger: GTAGTGAGGTACTCCCTCTGCGTGCTGCAGTGTTCACGAGTACCGGCTGTCCAGCTGGCTGGGGCAGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469998.1
CDS TCA 72 bp GAGAATGTCCAGTTCTGCTGTGAGGAGGCCACTGGCTaGAGGCCCAAGCGCAGGGCCCTGGATGGAGCATGG +
Preference number: 6 (lower is better)
Translates to: ENVQFCCEEATG*RPKRRALDGAW
Trigger: CCATGCTCCATCCAGGGCCCTGCGCTTGGGCCTTCAGCCAGTGGCCTCCTCACAGCAGAACTGGACATTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS TCA 72 bp CCAAGTAAGGGCAGGGACCGGGGAGATGCGCAGTCCTaGGCAATCCTTGTCCTGGCCCTGGAGTCTTTGGCC +
Preference number: 6 (lower is better)
Translates to: PSKGRDRGDAQS*AILVLALESLA
Trigger: GGCCAAAGACTCCAGGGCCAGGACAAGGATTGCTCAGGACTGCGCATCTCCCCGGTCCCTGCCCTTACTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS GCA 72 bp TCTCCCTGCCTTGACACCACCGTGCCTGCAGGAACGTaGAGAAGCGCCACCCGGCCATCCAACAGAGATGAG +
Preference number: 6 (lower is better)
Translates to: SPCLDTTVPAGT*RSATRPSNRDE
Trigger: CTCATCTCTGTTGGATGGCCGGGTGGCGCTTCTGCACGTTCCTGCAGGCACGGTGGTGTCAAGGCAGGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS GCA 72 bp GACACGAGCTTGTGGGGCCGAAGGGTCAGGGTCACCTaGCCCGGGCTTCTCCAGCTCCTCCAAGATCTGTTT +
Preference number: 6 (lower is better)
Translates to: DTSLWGRRVRVT*PGLLQLLQDLF
Trigger: AAACAGATCTTGGAGGAGCTGGAGAAGCCCGGGGCAGGTGACCCTGACCCTTCGGCCCCACAAGCTCGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434090.2
CDS GCA 72 bp AAGTCTGAGTGTCGGTCCGGGGGCCGCTGGAAGACATaGTTGTACATCTCCACCTGGGGGAGGAGCCGTCAG +
Preference number: 6 (lower is better)
Translates to: KSECRSGGRWKT*LYISTWGRSRQ
Trigger: CTGACGGCTCCTCCCCCAGGTGGAGATGTACAAGCATGTCTTCCAGCGGCCCCCGGACCGACACTCAGACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS GCA 72 bp GAGTGGCCTGGCCTGGCCCCCAGCAAGCTCGACACCTaGAGGCTGTTAGTTTCTGACTGTGGGCACAGATGG +
Preference number: 6 (lower is better)
Translates to: EWPGLAPSKLDT*RLLVSDCGHRW
Trigger: CCATCTGTGCCCACAGTCAGAAACTAACAGCCTGCAGGTGTCGAGCTTGCTGGGGGCCAGGCCAGGCCACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS CCA 72 bp TCCTCTTGGCCAAAGACAGCACCTTGGTCCTCTTCCTaGCCCGCTGCCGGGGCAGGGCAGTGTTCTCCACAA +
Preference number: 6 (lower is better)
Translates to: SSWPKTAPWSSS*PAAGAGQCSPQ
Trigger: TTGTGGAGAACACTGCCCTGCCCCGGCAGCGGGCCAGGAAGAGGACCAAGGTGCTGTCTTTGGCCAAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000434090.2
ENST00000491019.2
CDS CCA 72 bp AGTCGGATGAGGCTGAGGAGTAGACGCTGGTGTCTGTaGGCGGCAAGCCACCCAGGCACTGAGGCAAGAGAC +
Preference number: 6 (lower is better)
Translates to: SRMRLRSRRWCL*AASHPGTEARD
Trigger: GTCTCTTGCCTCAGTGCCTGGGTGGCTTGCCGCCCACAGACACCAGCGTCTACTCCTCAGCCTCATCCGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434090.2
CDS CCA 72 bp CCCACCCTCGGCCGAGACCTCGCATCCTGGCTTGACTaGGGGGAGTTTCCTCCACTTCTGACCCAAACTGAC +
Preference number: 6 (lower is better)
Translates to: PTLGRDLASWLD*GEFPPLLTQTD
Trigger: GTCAGTTTGGGTCAGAAGTGGAGGAAACTCCCCCCAGTCAAGCCAGGATGCGAGGTCTCGGCCGAGGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CAA 72 bp CGCTGCCGGGGCAGGGCAGTGTTCTCCACAAGGGTGTaGGGGAGTGTGGTCACCTTCCTCATGATCTTCCGG +
Preference number: 6 (lower is better)
Translates to: RCRGRAVFSTRV*GSVVTFLMIFR
Trigger: CCGGAAGATCATGAGGAAGGTGACCACACTCCCCAACACCCTTGTGGAGAACACTGCCCTGCCCCGGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000434090.2
ENST00000491019.2
CDS CAA 90 bp GCAGAGGCCTCTACCCGTCCTGGTCAGAGGAGCCCTCAGACAGTTTaGGGAAAGCCAGACTGGGGTGTCGATGCCGCAGTGAGGACTCGT +
Preference number: 6 (lower is better)
Translates to: AEASTRPGQRSPQTV*GKPDWGVDAAVRTR
Trigger: ACGAGTCCTCACTGCGGCATCGACACCCCAGTCTGGCTTTCCCAAAACTGTCTGAGGGCTCCTCTGACCAGGACGGGTAGAGGCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
ENST00000492278.5
CDS CAA 90 bp CACGGCTTCGTCTTGCGCCTCCACTCACCATCCACCATGGCGGGCTaGGCGGGCTCAATGCGAGACACAATTTCGGCAAGGTCCGTGAAG +
Preference number: 6 (lower is better)
Translates to: HGFVLRLHSPSTMAG*AGSMRDTISARSVK
Trigger: CTTCACGGACCTTGCCGAAATTGTGTCTCGCATTGAGCCCGCCAAGCCCGCCATGGTGGATGGTGAGTGGAGGCGCAAGACGAAGCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS TCA 72 bp GCATCCGACTTCCTGCTGGCCAGGGTCTCATCCGTGTaGCTCTCTGAGTGCTGGGAGACCGTGGAGGGTATC +
Preference number: 6 (lower is better)
Translates to: ASDFLLARVSSV*LSECWETVEGI
Trigger: GATACCCTCCACGGTCTCCCAGCACTCAGAGAGTCACACGGATGAGACCCTGGCCAGCAGGAAGTCGGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS TCA 72 bp GCCACCAGAGGCCCAAAGGGCAAGATGAAGGAGACGTaGGGCAGGGTCACGTTCACAAGCACAGGAAGGGCC +
Preference number: 6 (lower is better)
Translates to: ATRGPKGKMKET*GRVTFTSTGRA
Trigger: GGCCCTTCCTGTGCTTGTGAACGTGACCCTGCCTCACGTCTCCTTCATCTTGCCCTTTGGGCCTCTGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS GCA 72 bp GTTCCCACTGGGGTCCCTCTATCCTGCAGCAGATGGTaGCTTCAGGGCGTGGGTTTCTGGACAGAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: VPTGVPLSCSRW*LQGVGFWTELW
Trigger: CCACAGCTCTGTCCAGAAACCCACGCCCTGAAGGCACCATCTGCTGCAGGATAGAGGGACCCCAGTGGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS GCA 72 bp TCCGCCATTACACCTTCTAGAGGCAGAAGACCCACATaGCCAGCTCGATGGGCAGCTGTGGGCACACGGCTG +
Preference number: 6 (lower is better)
Translates to: SAITPSRGRRPT*PARWAAVGTRL
Trigger: CAGCCGTGTGCCCACAGCTGCCCATCGAGCTGGGCATGTGGGTCTTCTGCCTCTAGAAGGTGTAATGGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS GCA 72 bp CACGCAACACACGTAGGCCAGGCGCGTCTGAATCTCTaGCATGTTCAACACCTGCTGCCGTCACAGCCGCCT +
Preference number: 6 (lower is better)
Translates to: HATHVGQARLNL*HVQHLLPSQPP
Trigger: AGGCGGCTGTGACGGCAGCAGGTGTTGAACATGGCAGAGATTCAGACGCGCCTGGCCTACGTGTGTTGCGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS CCA 72 bp AGAACACCTGCTTCTTGGCCTTCCCGGCAGCCACACTaGCTACAGACACGAGAGGGATGGCCTGGCTCTCAG +
Preference number: 6 (lower is better)
Translates to: RTPASWPSRQPH*LQTREGWPGSQ
Trigger: CTGAGAGCCAGGCCATCCCTCTCGTGTCTGTAGCCAGTGTGGCTGCCGGGAAGGCCAAGAAGCAGGTGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000434090.2
CDS CCA 72 bp CGGGCTTCTCCAGCTCCTCCAAGATCTGTTTGCGAATaGAAGGCGCGGGGACGGAGTGGCTCCTCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: RASPAPPRSVCE*KARGRSGSSSA
Trigger: TGCTGAAGAGGAGCCACTCCGTCCCCGCGCCTTCCATTCGCAAACAGATCTTGGAGGAGCTGGAGAAGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000434090.2
CDS CAA 72 bp CGAGACACAATTTCGGCAAGGTCCGTGAAGGAGGCGTaGGGACAGGTGAGGACCGCACTCGCGGGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: RDTISARSVKEA*GQVRTALAGFL
Trigger: CAAGAAGCCCGCGAGTGCGGTCCTCACCTGTCCCAACGCCTCCTTCACGGACCTTGCCGAAATTGTGTCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
CDS CAA 72 bp GTCTTGCGCCTCCACTCACCATCCACCATGGCGGGCTaGGCGGGCTCAATGCGAGACACAATTTCGGCAAGG +
Preference number: 6 (lower is better)
Translates to: VLRLHSPSTMAG*AGSMRDTISAR
Trigger: CCTTGCCGAAATTGTGTCTCGCATTGAGCCCGCCAAGCCCGCCATGGTGGATGGTGAGTGGAGGCGCAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CAA 72 bp CTGGATGGAGCATGGAGGGTAGTGGACCCGCCCTTCTaGTCCTGCGGCCCCTCCAACAAGCAGCCTTCATTC +
Preference number: 6 (lower is better)
Translates to: LDGAWRVVDPPF*SCGPSNKQPSF
Trigger: GAATGAAGGCTGCTTGTTGGAGGGGCCGCAGGACAAGAAGGGCGGGTCCACTACCCTCCATGCTCCATCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS TCA 72 bp TGCTGGAGGCTGCCCAGGATCTTCTCACCCAAGAGATaGATCAGCCGAGTCACCACCTGTGGGTACCTGCGC +
Preference number: 6 (lower is better)
Translates to: CWRLPRIFSPKR*ISRVTTCGYLR
Trigger: GCGCAGGTACCCACAGGTGGTGACTCGGCTGATTCATCTCTTGGGTGAGAAGATCCTGGGCAGCCTCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS TCA 72 bp CCCTGCCCAGCACTTCCTGCCATCGCTAGTTCGCAGTaGGTTATTCAGGGCCTAGGCAGTCACGCAGAGGCT +
Preference number: 6 (lower is better)
Translates to: PCPALPAIASSQ*VIQGLGSHAEA
Trigger: AGCCTCTGCGTGACTGCCTAGGCCCTGAATAACTCACTGCGAACTAGCGATGGCAGGAAGTGCTGGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469998.1
CDS GCA 72 bp GGAGCATGGAGGGTAGTGGACCCGCCCTTCTTGTCCTaGGGCCCCTCCAACAAGCAGCCTTCATTCCCATTT +
Preference number: 6 (lower is better)
Translates to: GAWRVVDPPFLS*GPSNKQPSFPF
Trigger: AAATGGGAATGAAGGCTGCTTGTTGGAGGGGCCGCAGGACAAGAAGGGCGGGTCCACTACCCTCCATGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS GCA 72 bp GCTGAGCTGACAAACAGGGCCATATGCTGGAGCACATaGTGCCGGTGCCTGCGTGTGCATGTACACGCGTGT +
Preference number: 6 (lower is better)
Translates to: AELTNRAICWST*CRCLRVHVHAC
Trigger: ACACGCGTGTACATGCACACGCAGGCACCGGCAGCATGTGCTCCAGCATATGGCCCTGTTTGTCAGCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS CCA 72 bp TCTTGCGCCTCCACTCACCATCCACCATGGCGGGCTTaGCGGGCTCAATGCGAGACACAATTTCGGCAAGGT +
Preference number: 6 (lower is better)
Translates to: SCASTHHPPWRA*RAQCETQFRQG
Trigger: ACCTTGCCGAAATTGTGTCTCGCATTGAGCCCGCCAAGCCCGCCATGGTGGATGGTGAGTGGAGGCGCAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CCA 72 bp ACGGCTTCGTCTTGCGCCTCCACTCACCATCCACCATaGCGGGCTTGGCGGGCTCAATGCGAGACACAATTT +
Preference number: 6 (lower is better)
Translates to: TASSCASTHHPP*RAWRAQCETQF
Trigger: AAATTGTGTCTCGCATTGAGCCCGCCAAGCCCGCCATGGTGGATGGTGAGTGGAGGCGCAAGACGAAGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CAA 72 bp GGCCTCCACCTCCACCCAGTCCAGGGCAAAGTCGATTaGCCGCACGAAGGACGACATCCTCTTCACCACAGT +
Preference number: 6 (lower is better)
Translates to: GLHLHPVQGKVD*PHEGRHPLHHS
Trigger: ACTGTGGTGAAGAGGATGTCGTCCTTCGTGCGGCAAATCGACTTTGCCCTGGACTGGGTGGAGGTGGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS TCA 72 bp GGGGCTCCTTGGGCTGCAGGGCCGGGTATTCCTTCTTaGAACGCAGAATCCTCTTGGCCAAAGACAGCACCT +
Preference number: 6 (lower is better)
Translates to: GAPWAAGPGIPS*NAESSWPKTAP
Trigger: AGGTGCTGTCTTTGGCCAAGAGGATTCTGCGTTTCAAGAAGGAATACCCGGCCCTGCAGCCCAAGGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000434090.2
ENST00000491019.2
CDS GCA 72 bp TCAGACAGTTTTGGGAAAGCCAGACTGGGGTGTCGATaGCGCAGTGAGGACTCGTCCTCCAAGTCTGAGCCC +
Preference number: 6 (lower is better)
Translates to: SDSFGKARLGCR*RSEDSSSKSEP
Trigger: GGGCTCAGACTTGGAGGACGAGTCCTCACTGCGGCATCGACACCCCAGTCTGGCTTTCCCAAAACTGTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
ENST00000492278.5
CDS GCA 72 bp GTTCTGCATGCTGCTGAGCTGACAAACAGGGCCATATaGTGGAGCACATGCTGCCGGTGCCTGCGTGTGCAT +
Preference number: 6 (lower is better)
Translates to: VLHAAELTNRAI*WSTCCRCLRVH
Trigger: ATGCACACGCAGGCACCGGCAGCATGTGCTCCAGCATATGGCCCTGTTTGTCAGCTCAGCAGCATGCAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS CCA 72 bp CTGCATGCTGCTGAGCTGACAAACAGGGCCATATGCTaGAGCACATGCTGCCGGTGCCTGCGTGTGCATGTA +
Preference number: 6 (lower is better)
Translates to: LHAAELTNRAIC*STCCRCLRVHV
Trigger: TACATGCACACGCAGGCACCGGCAGCATGTGCTCCAGCATATGGCCCTGTTTGTCAGCTCAGCAGCATGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS TCA 72 bp CCCCAGCAAGCTCGACACCTGCAGGCTGTTAGTTTCTaGCTGTGGGCACAGATGGGGCTTAATTGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: PQQARHLQAVSF*LWAQMGLNCSQ
Trigger: CTGGGAGCAATTAAGCCCCATCTGTGCCCACAGTCAGAAACTAACAGCCTGCAGGTGTCGAGCTTGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS GCA 72 bp TCCCTGGGCTGGAAGACGTGCTCCCCTTCCTGCAGCTaGACAAAGACGATGTGTTTGCAAAGCTCCAGGAAC +
Preference number: 6 (lower is better)
Translates to: SLGWKTCSPSCS*TKTMCLQSSRN
Trigger: GTTCCTGGAGCTTTGCAAACACATCGTCTTTGTGCAGCTGCAGGAAGGGGAGCACGTCTTCCAGCCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000434090.2
ENST00000491019.2
CDS GCA 72 bp CACGCAACACACGTAGGCCAGGCGCGTCTGAATCTCTaGCATGTTCAACACCTTGACTTTCGTGGCCAAGGG +
Preference number: 6 (lower is better)
Translates to: HATHVGQARLNL*HVQHLDFRGQG
Trigger: CCCTTGGCCACGAAAGTCAAGGTGTTGAACATGGCAGAGATTCAGACGCGCCTGGCCTACGTGTGTTGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000469998.1
CDS CAA 90 bp AACAGAGATGAGTCTTCCAGCTTCATCAGGGTGAGCAGGTCCTTCTaGGCAGCTCTGAAGATGGCATCCGACTTCCTGCTGGCCAGGGTC +
Preference number: 6 (lower is better)
Translates to: NRDESSSFIRVSRSF*AALKMASDFLLARV
Trigger: GACCCTGGCCAGCAGGAAGTCGGATGCCATCTTCAGAGCTGCCAAGAAGGACCTGCTCACCCTGATGAAGCTGGAAGACTCATCTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS TCA 72 bp TCCTCGACTTGGCCTTTGTTCTGCATGCTGCTGAGCTaGCAAACAGGGCCATATGCTGGAGCACATGCTGCC +
Preference number: 6 (lower is better)
Translates to: SSTWPLFCMLLS*QTGPYAGAHAA
Trigger: GGCAGCATGTGCTCCAGCATATGGCCCTGTTTGTCAGCTCAGCAGCATGCAGAACAAAGGCCAAGTCGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS GCA 72 bp TCAAGAAGACAGAATCAGAGCACAGGCAGCCTCCACTaGACGCCCACCAGAAGACAGAGAGCAGCACATGCT +
Preference number: 6 (lower is better)
Translates to: SRRQNQSTGSLH*TPTRRQRAAHA
Trigger: AGCATGTGCTGCTCTCTGTCTTCTGGTGGGCGTGCAGTGGAGGCTGCCTGTGCTCTGATTCTGTCTTCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434090.2
CDS CCA 72 bp TCTCATCCGTGTGACTCTCTGAGTGCTGGGAGACCGTaGAGGGTATCTCTGCAACCATCACGCTTTTCCTGG +
Preference number: 6 (lower is better)
Translates to: SHPCDSLSAGRP*RVSLQPSRFSW
Trigger: CCAGGAAAAGCGTGATGGTTGCAGAGATACCCTCCACGGTCTCCCAGCACTCAGAGAGTCACACGGATGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS CCA 72 bp TCTGGTAGTCAGATTCGTCATCCACCATGGCGGGCTTaGCGGGCTCAATGCGAGACACAATTTCGGCAAGGT +
Preference number: 6 (lower is better)
Translates to: SGSQIRHPPWRA*RAQCETQFRQG
Trigger: ACCTTGCCGAAATTGTGTCTCGCATTGAGCCCGCCAAGCCCGCCATGGTGGATGACGAATCTGACTACCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000277531.8
ENST00000406427.6
CDS CCA 72 bp TCCAACAAGCAGCCTTCATTCCCATTTCCCACTGGGTaGGGTGGGAGGCAAAACGTGGTTCTACTTCAGGCC +
Preference number: 6 (lower is better)
Translates to: SNKQPSFPFPTG*GGRQNVVLLQA
Trigger: GGCCTGAAGTAGAACCACGTTTTGCCTCCCACCCCACCCAGTGGGAAATGGGAATGAAGGCTGCTTGTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CCA 72 bp ACCTGCAGGCTGTTAGTTTCTGACTGTGGGCACAGATaGGGCTTAATTGCTCCCAGTTCCTCGACTTGGCCT +
Preference number: 6 (lower is better)
Translates to: TCRLLVSDCGHR*GLIAPSSSTWP
Trigger: AGGCCAAGTCGAGGAACTGGGAGCAATTAAGCCCCATCTGTGCCCACAGTCAGAAACTAACAGCCTGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS TCA 72 bp CAGGAGCGCAGGTGTCAGGGAATCAGGTGGGGAATGTaGAGAATGCTTCGAACGTTCGAGGAAATGAACCAC +
Preference number: 6 (lower is better)
Translates to: QERRCQGIRWGM*RMLRTFEEMNH
Trigger: GTGGTTCATTTCCTCGAACGTTCGAAGCATTCTTCACATTCCCCACCTGATTCCCTGACACCTGCGCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469998.1
ENST00000492278.5
CDS CAA 72 bp GCACAGATGGGGCTTAATTGCTCCCAGTTCCTCGACTaGGCCTTTGTTCTGCATGCTGCTGAGCTGACAAAC +
Preference number: 6 (lower is better)
Translates to: AQMGLNCSQFLD*AFVLHAAELTN
Trigger: GTTTGTCAGCTCAGCAGCATGCAGAACAAAGGCCAAGTCGAGGAACTGGGAGCAATTAAGCCCCATCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492278.5
CDS TCA 72 bp ACGTTTTTCAGCATGTACAGAACTTCCGATGGCAGGTaGGAATTCTTCACGTCAAACTCCGTGAGGTCGGCC +
Preference number: 6 (lower is better)
Translates to: TFFSMYRTSDGR*EFFTSNSVRSA
Trigger: GGCCGACCTCACGGAGTTTGACGTGAAGAATTCTCACCTGCCATCGGAAGTTCTGTACATGCTGAAAAACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000434090.2
ENST00000491019.2
CDS CCA 72 bp AACAAGGGCACACCTCTACCCGCTCATGCTCACACCTaGACACTTTTCCCTGGGTTCCTTTCAAGTCAAATT +
Preference number: 6 (lower is better)
Translates to: NKGTPLPAHAHT*TLFPGFLSSQI
Trigger: AATTTGACTTGAAAGGAACCCAGGGAAAAGTGTCCAGGTGTGAGCATGAGCGGGTAGAGGTGTGCCCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000434090.2
CDS CCA 72 bp GACCCGAACGTTTTTCAGCATGTACAGAACTTCCGATaGCAGGTGAGAATTCTTCACGTCAAACTCCGTGAG +
Preference number: 6 (lower is better)
Translates to: DPNVFQHVQNFR*QVRILHVKLRE
Trigger: CTCACGGAGTTTGACGTGAAGAATTCTCACCTGCCATCGGAAGTTCTGTACATGCTGAAAAACGTTCGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000277531.8
ENST00000406427.6
ENST00000434090.2
ENST00000491019.2
CDS GCA 72 bp GGAAAATGGGCAAAAGACAAAGAAGGCTATCCAAGGTaGTCGGCCTCACAGTTCATCAAGAAGACAGAATCA +
Preference number: 6 (lower is better)
Translates to: GKWAKDKEGYPR*SASQFIKKTES
Trigger: TGATTCTGTCTTCTTGATGAACTGTGAGGCCGAGCACCTTGGATAGCCTTCTTTGTCTTTTGCCCATTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434090.2