RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PNPLA6 (Homo sapiens)

Ensembl gene IDs: ENSG00000032444

Ensembl transcript IDs: ENST00000221249.10, ENST00000414982.7, ENST00000450331.7, ENST00000545201.6, ENST00000593924.5, ENST00000594098.1, ENST00000594551.1, ENST00000594754.5, ENST00000594864.1, ENST00000595176.5, ENST00000595264.5, ENST00000595352.1, ENST00000595889.1, ENST00000596515.5, ENST00000597202.1, ENST00000598462.1, ENST00000599311.5, ENST00000599947.1, ENST00000599951.1, ENST00000600737.6, ENST00000600942.5, ENST00000601001.5, ENST00000601668.5, ENST00000602191.5, ENST00000646984.1

Found 1033 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGGGTCAGTCCAGTGTGTaGGCCGCGGGGGTCACAGGC +
Preference number: 2 (lower is better)
Translates to: PRGEFIGGGAGQVISATLGQSSV*AAGVTG
Trigger: GCCTGTGACCCCCGCGGCCCACACACTGGACTGACC...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
3UTR CCA 72 bp ACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTaGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGGG +
Preference number: 3 (lower is better)
Translates to: TASPLRAGQSSV*AAGVTGIAAGG
Trigger: CCCTCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCCCCGGTGGGATCGGGTaGCCGCCCTGGGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGPGGIG*PPWGLP
Trigger: AGGGAGACCCCAGGGCGGCCACCCGATCCCACCGGG...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGTGAGCACCGCCAGCTaGCCCACCAGTTCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGVSTAS*PTSSPG
Trigger: GCCCGGGGAACTGGTGGGGCAGCTGGCGGTGCTCAC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCCGGGAGAAGTCGCTGTaGCGGTCCGCGCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGREKSL*RSARLE
Trigger: CTCCAGGCGCGCGGACCGGCACAGCGACTTCTCCCG...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCCTCCGGGACCGATGGTaGCGCCATTGCCAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGLRDRW*RHCQGP
Trigger: CGGCCCCTGGCAATGGCGCCACCATCGGTCCCGGAG...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000221249.10
CDS-3UTR CCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGCCCGGTGGGATCGGGTaGCCGCCCTGGGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQPGGIG*PPWGLP
Trigger: AGGGAGACCCCAGGGCGGCCACCCGATCCCACCGGG...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCACCGCGTGCACCGTCGTaGCTCGCGGCTGCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAPRAPS*LAAAGS
Trigger: TGACCCGGCAGCCGCGAGCCACGACGGTGCACGCGG...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGCTGCTTCGTGCGGCTaGCGCTGCGCTCCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGAASCG*RCAPPR
Trigger: ACGCGGAGGAGCGCAGCGCCAGCCGCACGAAGCAGC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCACCTCCACCACGCCGATaGGGTCGCCGCGGCCGTACT +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAPPPRR*GRRGRT
Trigger: AGTACGGCCGCGGCGACCTCATCGGCGTGGTGGAGG...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGTGGGAGGGAGGGGGTaGCCCCTGTCGAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGVGGRG*PLSRSS
Trigger: TGAGGACCTCGACAGGGGTCACCCCCTCCCTCCCAC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCCGGCTGCCGGGTCAGTaGCTCCACCACGCCGATGAG +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGRLPGQ*LHHADE
Trigger: CTCATCGGCGTGGTGGAGGCACTGACCCGGCAGCCG...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGTCGTGGCTCGCGGCTaGCGGGTCAGTGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSVVARG*RVSAST
Trigger: GGTGGAGGCACTGACCCGGCAGCCGCGAGCCACGAC...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTGTGTCGCGCACCGCGTaGACCGTCGTGGCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGVSRTA*TVVARG
Trigger: GCCGCGAGCCACGACGGTGCACGCGGTGCGCGACAC...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGTGTCGCGCACCGCGTaGACCGTCGTGGCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIVSRTA*TVVARG
Trigger: GCCGCGAGCCACGACGGTGCACGCGGTGCGCGACAC...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGTCGGACCGATGGCCTaGAGGGCGTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGVGPMA*RACCSS
Trigger: GGAGCTGCAGCACGCCCTGCAGGCCATCGGTCCGAC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATTAGCCACTCCACGGTaGGCGTGGGGCCCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQALATPR*AWGPRP
Trigger: AGGGCGCGGGCCCCACGCGCACCGTGGAGTGGCTAA...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGCGGGAGAAGTCGCTGTaGCGGTCCGCGCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQREKSL*RSARLE
Trigger: CTCCAGGCGCGCGGACCGGCACAGCGACTTCTCCCG...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGGGGCCCGCTGCTTCGTaGGGCTGGCGCTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRGPAAS*GWRCAP
Trigger: AGGAGCGCAGCGCCAGCCGCACGAAGCAGCGGGCCC...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCCCATCTCGGAGGCAGTaGTGGGGCTTGCGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGPSRRQ*WGLRPR
Trigger: CCGAGGGCGCAAGCCCCAGCACTGCCTCCGAGATGG...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGGACTCCGGGACCGATaGTGGCGCCATTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGGLRDR*WRHCQG
Trigger: CCCCTGGCAATGGCGCCACCATCGGTCCCGGAGTCC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000221249.10
CDS-3UTR CCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGCCCGGTGGGATCGGGTaGCCGCCCTGGGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRPGGIG*PPWGLP
Trigger: AGGGAGACCCCAGGGCGGCCACCCGATCCCACCGGG...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCCGCGTGCACCGTCGTaGCTCGCGGCTGCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGPRAPS*LAAAGS
Trigger: TGACCCGGCAGCCGCGAGCCACGACGGTGCACGCGG...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGCTGCTTCGTGCGGCTaGCGCTGCGCTCCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSAASCG*RCAPPR
Trigger: ACGCGGAGGAGCGCAGCGCCAGCCGCACGAAGCAGC...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAGAGCCGGGCGGCTCCTaGGGCAGACAGCGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAEPGGS*GRQRRC
Trigger: GCAACGACGCTGTCTGCCCCAGGAGCCGCCCGGCTC...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGTGCTCACGAGGCTCCTaGGTGGGGGTCCGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRCSRGS*VGVRAG
Trigger: CCCCGCTCGGACCCCCACTCAGGAGCCTCGTGAGCA...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATATCAGGCATCTGTGGCTaGGCCGGGCGGCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGISGICG*AGRLLG
Trigger: CCCCAGGAGCCGCCCGGCTCAGCCACAGATGCCTGA...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGTCAGGCATCTGTGGCTaGGCCGGGCGGCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRSGICG*AGRLLG
Trigger: CCCCAGGAGCCGCCCGGCTCAGCCACAGATGCCTGA...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGGGGGCTCCTTCCGCTaGAGCGTGGGCGTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGGGSFR*SVGVSF
Trigger: GAAAGAGACGCCCACGCTGCAGCGGAAGGAGCCCCC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCCCGGAGGCCTCTTCCTaGAGGGACACGGAGATCCGG +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGPEASS*RDTEIR
Trigger: CCGGATCTCCGTGTCCCTGCAGGAAGAGGCCTCCGG...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCACGGCTGCCGGGTCAGTaGCTCCACCACGCCGATGAG +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQARLPGQ*LHHADE
Trigger: CTCATCGGCGTGGTGGAGGCACTGACCCGGCAGCCG...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCCGGCTGCCGGGTCAGTaGCTCCACCACGCCGATGAG +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSRLPGQ*LHHADE
Trigger: CTCATCGGCGTGGTGGAGGCACTGACCCGGCAGCCG...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGTCGTGGCTCGCGGCTaGCGGGTCAGTGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIVVARG*RVSAST
Trigger: GGTGGAGGCACTGACCCGGCAGCCGCGAGCCACGAC...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCCTGCAGGGCGTGCTaGAGCTCCAGCGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQACRAC*SSSVKA
Trigger: GGCCTTCACGCTGGAGCTGCAGCACGCCCTGCAGGC...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGTCGGACCGATGGCCTaGAGGGCGTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSVGPMA*RACCSS
Trigger: GGAGCTGCAGCACGCCCTGCAGGCCATCGGTCCGAC...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAGTCGGACCGATGGCCTaGAGGGCGTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAVGPMA*RACCSS
Trigger: GGAGCTGCAGCACGCCCTGCAGGCCATCGGTCCGAC...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATATTAGCCACTCCACGGTaGGCGTGGGGCCCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGILATPR*AWGPRP
Trigger: AGGGCGCGGGCCCCACGCGCACCGTGGAGTGGCTAA...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATACGCGGACAGCGCAGGTaGAGGTGCCCCGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIRGQRR*RCPEHQ
Trigger: CTGGTGCTCGGGGCACCTGCACCTGCGCTGTCCGCG...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCGCGGACAGCGCAGGTaGAGGTGCCCCGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGRGQRR*RCPEHQ
Trigger: CTGGTGCTCGGGGCACCTGCACCTGCGCTGTCCGCG...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAGCTTGGCAGGGCTaGGGCGCGAAAAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQAAWQG*GAKRGG
Trigger: GCCGCCTCTTTTCGCGCCGCAGCCCTGCCAAGCTGC...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGCAGCTTGGCAGGGCTaGGGCGCGAAAAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSAAWQG*GAKRGG
Trigger: GCCGCCTCTTTTCGCGCCGCAGCCCTGCCAAGCTGC...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATACGGGAGAAGTCGCTGTaGCGGTCCGCGCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIREKSL*RSARLE
Trigger: CTCCAGGCGCGCGGACCGGCACAGCGACTTCTCCCG...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGTCGTGCGGCTGGCGCTaGGCTCCTCCGCGTACAACG +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQSCGWR*APPRTT
Trigger: CGTTGTACGCGGAGGAGCGCAGCGCCAGCCGCACGA...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGCACCACGTAGATGCTaGCATCTGGCTGGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGAPRRC*HLAGPA
Trigger: GGCCGGGCCAGCCAGATGCCAGCATCTACGTGGTGC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATTGGGAGGCCGGGGCTaGGGAACAGACGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQALGGRG*GTDAGA
Trigger: AGCCCCTGCGTCTGTTCCCCAGCCCCGGCCTCCCAA...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTAGCCCCGCACAGGGCTaGTGCGAGTTGGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGSPAQG*CELGGR
Trigger: CCGGCCTCCCAACTCGCACCAGCCCTGTGCGGGGCT...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGCCCCGCACAGGGCTaGTGCGAGTTGGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRSPAQG*CELGGR
Trigger: CCGGCCTCCCAACTCGCACCAGCCCTGTGCGGGGCT...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGATCGGGTGGCCGCCCTaGGGTCTCCCTGGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRIGWPP*GLPGLV
Trigger: GACGAGCCCAGGGAGACCCCAGGGCGGCCACCCGAT...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTATCGGGTGGCCGCCCTaGGGTCTCCCTGGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGIGWPP*GLPGLV
Trigger: GACGAGCCCAGGGAGACCCCAGGGCGGCCACCCGAT...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGTAGCGTCGGACCGATaGCCTGCAGGGCGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGVASDR*PAGRAA
Trigger: TGCAGCACGCCCTGCAGGCCATCGGTCCGACGCTAC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCCCGACAGCGTCATGCTaGCGCGCACGTACCGCCACA +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGPTASC*RARTAT
Trigger: TGTGGCGGTACGTGCGCGCCAGCATGACGCTGTCGG...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGTCCTCAGGCATCTGTaGCTGAGCCGGGCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGVLRHL*LSRAAP
Trigger: AGGAGCCGCCCGGCTCAGCCACAGATGCCTGAGGAC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAGGTCAGTCCAGTGTGTaGGCCGCGGGGGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAGQSSV*AAGVTG
Trigger: GCCTGTGACCCCCGCGGCCCACACACTGGACTGACC...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGGCGCCAGGACGTCCTaGAACCCATCCCTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSGARTS*NPSLSA
Trigger: GGCGGAGAGGGATGGGTTCCAGGACGTCCTGGCGCC...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414982.7
ENST00000600737.6
CDS-3UTR TCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGTGCTCACGAGGCTCCTaGGTGGGGGTCCGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRCSRGS*VGVRAG
Trigger: CCCCGCTCGGACCCCCACTCAGGAGCCTCGTGAGCA...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGACCTCCACCACGCCGATaGGGTCGCCGCGGCCGTACT +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGPPPRR*GRRGRT
Trigger: AGTACGGCCGCGGCGACCTCATCGGCGTGGTGGAGG...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGCGGGTACCGGCGTTTaGTGTGACCCAAGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGAGTGV*CDPRCP
Trigger: AGGGCACCTTGGGTCACATCAAACGCCGGTACCCGC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAGCTGCAGCTCCAGCGTaGAGGCCACCATGGGGACCT +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAAAAPA*RPPWGP
Trigger: AGGTCCCCATGGTGGCCTTCACGCTGGAGCTGCAGC...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCTGTCCCCGTAGGTGCTaGGGTCCGTCTCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGCPRRC*GPSHPG
Trigger: GCCAGGATGAGACGGACCTCAGCACCTACGGGGACA...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCATCAGGCATCTGTGGCTaGGCCGGGCGGCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAASGICG*AGRLLG
Trigger: CCCCAGGAGCCGCCCGGCTCAGCCACAGATGCCTGA...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTGTGGGAGGGAGGGGGTaGCCCCTGTCGAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGVGGRG*PLSRSS
Trigger: TGAGGACCTCGACAGGGGTCACCCCCTCCCTCCCAC...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGGTGGGAGGGAGGGGGTaGCCCCTGTCGAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRVGGRG*PLSRSS
Trigger: TGAGGACCTCGACAGGGGTCACCCCCTCCCTCCCAC...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGTGGGAGGGAGGGGGTaGCCCCTGTCGAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGVGGRG*PLSRSS
Trigger: TGAGGACCTCGACAGGGGTCACCCCCTCCCTCCCAC...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGAAGACCGCGGAGAATaGTTCCACCGGCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGEDRGE*FHRQAQ
Trigger: CTGCGCCTGCCGGTGGAAGCATTCTCCGCGGTCTTC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAGAGCGGGGGCCACCCTaGAAGCCTGAGATGTCCCCT +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAERGPP*KPEMSP
Trigger: AGGGGACATCTCAGGCTTGCAGGGTGGCCCCCGCTC...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGTATTCACAGGCGCCTaGCGGCTGCTCACGAGGCTC +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGVFTGA*RLLTRL
Trigger: GAGCCTCGTGAGCAGCCGGCAGGCGCCTGTGAATAC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCCTGCCTCGAAGATGCTaGTGGTCTGGCGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGLPRRC*WSGGPG
Trigger: ACCAGGGCCGCCAGACCAGCAGCATCTTCGAGGCAG...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGTCGTGGCTCGCGGCTaGCGGGTCAGTGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAVVARG*RVSAST
Trigger: GGTGGAGGCACTGACCCGGCAGCCGCGAGCCACGAC...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGTGTCGCGCACCGCGTaGACCGTCGTGGCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRVSRTA*TVVARG
Trigger: GCCGCGAGCCACGACGGTGCACGCGGTGCGCGACAC...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGGCCTGCAGGGCGTGCTaGAGCTCCAGCGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRACRAC*SSSVKA
Trigger: GGCCTTCACGCTGGAGCTGCAGCACGCCCTGCAGGC...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTGCCTGCAGGGCGTGCTaGAGCTCCAGCGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGACRAC*SSSVKA
Trigger: GGCCTTCACGCTGGAGCTGCAGCACGCCCTGCAGGC...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGGCAGCTTGGCAGGGCTaGGGCGCGAAAAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRAAWQG*GAKRGG
Trigger: GCCGCCTCTTTTCGCGCCGCAGCCCTGCCAAGCTGC...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCTTGGCAGGGCTaGGGCGCGAAAAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIAAWQG*GAKRGG
Trigger: GCCGCCTCTTTTCGCGCCGCAGCCCTGCCAAGCTGC...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGACGGGAGAAGTCGCTGTaGCGGTCCGCGCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGREKSL*RSARLE
Trigger: CTCCAGGCGCGCGGACCGGCACAGCGACTTCTCCCG...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATATCGTGCGGCTGGCGCTaGGCTCCTCCGCGTACAACG +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGISCGWR*APPRTT
Trigger: CGTTGTACGCGGAGGAGCGCAGCGCCAGCCGCACGA...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCACTCCCGGGCCCGCTaGTTCGTGCGGCTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRHSRAR*FVRLAL
Trigger: CAGCGCCAGCCGCACGAAGCAGCGGGCCCGGGAGTG...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAAGCCCGACAGCGTCATaGTGGCGCGCACGTACCGCC +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGISPTAS*WRARTA
Trigger: GGCGGTACGTGCGCGCCAGCATGACGCTGTCGGGCT...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCCATCTCGGAGGCAGTaGTGGGGCTTGCGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGPSRRQ*WGLRPR
Trigger: CCGAGGGCGCAAGCCCCAGCACTGCCTCCGAGATGG...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGCCATCTCGGAGGCAGTaGTGGGGCTTGCGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRPSRRQ*WGLRPR
Trigger: CCGAGGGCGCAAGCCCCAGCACTGCCTCCGAGATGG...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCACTGGGATGCTTGGGGTaGCGTGGGCTTGCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQALGCLG*RGLARR
Trigger: GCGCCTTGCAAGCCCACGCCACCCCAAGCATCCCAG...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGCCCTGGCCCAGCCGCTaGAAGACCATGTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRPWPSR*KTMWRQ
Trigger: CTGCCGCCACATGGTCTTCCAGCGGCTGGGCCAGGG...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGTAGATGCTGGCATCTaGCTGGCCCGGCCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGVDAGI*LARPED
Trigger: GTCTTCCGGCCGGGCCAGCCAGATGCCAGCATCTAC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGCACCACGTAGATGCTaGCATCTGGCTGGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSAPRRC*HLAGPA
Trigger: GGCCGGGCCAGCCAGATGCCAGCATCTACGTGGTGC...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCACCACGTAGATGCTaGCATCTGGCTGGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQAPRRC*HLAGPA
Trigger: GGCCGGGCCAGCCAGATGCCAGCATCTACGTGGTGC...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCCCTCGAAGATGCTGCTaGTCTGGCGGCCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGPRRCC*SGGPGR
Trigger: CCTACCAGGGCCGCCAGACCAGCAGCATCTTCGAGG...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCGAAGGGCGACATCCTaGCTGCCACCGTGTGCGCCG +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGRRATS*LPPCAP
Trigger: CGGCGCACACGGTGGCAGCCAGGATGTCGCCCTTCG...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGCGAAGGGCGACATCCTaGCTGCCACCGTGTGCGCCG +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRRRATS*LPPCAP
Trigger: CGGCGCACACGGTGGCAGCCAGGATGTCGCCCTTCG...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCCGCGTGCACCGTCGTaGCTCGCGGCTGCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRPRAPS*LAAAGS
Trigger: TGACCCGGCAGCCGCGAGCCACGACGGTGCACGCGG...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGTAGCGTCGGACCGATaGCCTGCAGGGCGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQVASDR*PAGRAA
Trigger: TGCAGCACGCCCTGCAGGCCATCGGTCCGACGCTAC...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCTGTGCATCCTCCTGCTaGGCCAGCCACCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGCASSC*ASHPDS
Trigger: GCTGTCAGGGTGGCTGGCCCAGCAGGAGGATGCACA...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGCTGCTTCGTGCGGCTaGCGCTGCGCTCCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGAASCG*RCAPPR
Trigger: ACGCGGAGGAGCGCAGCGCCAGCCGCACGAAGCAGC...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCACCGAAGTCATGCTCTTaGCCCACTCCCGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAPKSCS*PTPGPA
Trigger: AGCGGGCCCGGGAGTGGGCCAAGAGCATGACTTCGG...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGTCTCGGAGGCAGTGCTaGGGCTTGCGCCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRSRRQC*GLRPRG
Trigger: CCCCCGAGGGCGCAAGCCCCAGCACTGCCTCCGAGA...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGAGCCGGGCGGCTCCTaGGGCAGACAGCGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAEPGGS*GRQRRC
Trigger: GCAACGACGCTGTCTGCCCCAGGAGCCGCCCGGCTC...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAGTCCTCAGGCATCTGTaGCTGAGCCGGGCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAVLRHL*LSRAAP
Trigger: AGGAGCCGCCCGGCTCAGCCACAGATGCCTGAGGAC...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCAGTCCAGTGTGTaGGCCGCGGGGGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGGQSSV*AAGVTG
Trigger: GCCTGTGACCCCCGCGGCCCACACACTGGACTGACC...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTGGTCAGTCCAGTGTGTaGGCCGCGGGGGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGGQSSV*AAGVTG
Trigger: GCCTGTGACCCCCGCGGCCCACACACTGGACTGACC...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCCTGAGGCCGCCATGCTaGGTGTGGCCGCGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSLRPPC*VWPRLK
Trigger: TTTAAGGCGCGGCCACACTCAGCATGGCGGCCTCAG...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000221249.10
CDS-3UTR TCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGGAGCCTCCATCGGTTaGTTCCAGCTGGACGGCCGA +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSGASIG*FQLDGR
Trigger: TCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCC...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR TCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGGAGCCTCCATCGGTTaGTTCCAGCTGGACGGCCGA +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQGASIG*FQLDGR
Trigger: TCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCC...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR TCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAGCGGGTACCGGCGTTTaGTGTGACCCAAGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAAGTGV*CDPRCP
Trigger: AGGGCACCTTGGGTCACATCAAACGCCGGTACCCGC...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCTGCAGCTCCAGCGTaGAGGCCACCATGGGGACCT +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIAAAPA*RPPWGP
Trigger: AGGTCCCCATGGTGGCCTTCACGCTGGAGCTGCAGC...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCACTGGGCCAGCCACCCTaGCAGCCGGAACTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQALGQPP*QPELLD
Trigger: ATCCAAGAGTTCCGGCTGTCAGGGTGGCTGGCCCAG...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCTGTAGCCGCCATCCATaGGTAGGTGCCCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGCSRHP*VGARPW
Trigger: CCAAGGACGGGCACCTACTCATGGATGGCGGCTACA...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCTCCTCCCCGCGCCATaGTTGGAAGGCCGACTGAGG +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGLLPAP*LEGRLR
Trigger: CCTCAGTCGGCCTTCCAAGCATGGCGCGGGGAGGAG...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221249.10
CDS-3UTR GCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCTCAGTTTCTTCCTCATaGGTGGCCGGGAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGSVSSS*VAGRWR
Trigger: CCGCCACCTCCCGGCCACGCATGAGGAAGAAACTGA...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGGGGGGCTCCTTCCGCTaGAGCGTGGGCGTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRGGSFR*SVGVSF
Trigger: GAAAGAGACGCCCACGCTGCAGCGGAAGGAGCCCCC...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
68% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTGGGGGCTCCTTCCGCTaGAGCGTGGGCGTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGGGSFR*SVGVSF
Trigger: GAAAGAGACGCCCACGCTGCAGCGGAAGGAGCCCCC...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGAAGACCGCGGAGAATaGTTCCACCGGCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSEDRGE*FHRQAQ
Trigger: CTGCGCCTGCCGGTGGAAGCATTCTCCGCGGTCTTC...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGCCGGAGGCCTCTTCCTaGAGGGACACGGAGATCCGG +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRPEASS*RDTEIR
Trigger: CCGGATCTCCGTGTCCCTGCAGGAAGAGGCCTCCGG...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGCTGCCTCGAAGATGCTaGTGGTCTGGCGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQLPRRC*WSGGPG
Trigger: ACCAGGGCCGCCAGACCAGCAGCATCTTCGAGGCAG...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAACCAGTTCCCCGGGCTaGGCTACGAACAGGCACACG +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQATSSPG*ATNRHT
Trigger: CGTGTGCCTGTTCGTAGCGCAGCCCGGGGAACTGGT...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCACCAGTTCCCCGGGCTaGGCTACGAACAGGCACACG +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSTSSPG*ATNRHT
Trigger: CGTGTGCCTGTTCGTAGCGCAGCCCGGGGAACTGGT...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGTGAGCACCGCCAGCTaGCCCACCAGTTCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRVSTAS*PTSSPG
Trigger: GCCCGGGGAACTGGTGGGGCAGCTGGCGGTGCTCAC...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGAGGCGGGTCACGACCTaGGGGTACCGGCGTTTGATG +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQRRVTT*GYRRLM
Trigger: CATCAAACGCCGGTACCCGCAGGTCGTGACCCGCCT...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGGAGGCCCCCAGGCGTaGCCGGATGATGTCACTGTT +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQGGPQA*PDDVTV
Trigger: AACAGTGACATCATCCGGGCACGCCTGGGGGCCTCC...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCTTGGATGCTATCCAGTaGGGAGGCCCCCAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSLDAIQ*GGPQAC
Trigger: GCACGCCTGGGGGCCTCCGCACTGGATAGCATCCAA...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCGGTGTGCATCCTCCTaGTGGGCCAGCCACCCTGAC +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGRCASS*WASHPD
Trigger: GTCAGGGTGGCTGGCCCAGCAGGAGGATGCACACCG...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCTTAGCCACTCCACGGTaGGCGTGGGGCCCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRLATPR*AWGPRP
Trigger: AGGGCGCGGGCCCCACGCGCACCGTGGAGTGGCTAA...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAAGAGCCAATGGACGTaGCGCCCACCAGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSKSQWT*RPPGPR
Trigger: CCGTGGACCTGGTGGGCGGCACGTCCATTGGCTCTT...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGAAGAGCCAATGGACGTaGCGCCCACCAGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQKSQWT*RPPGPR
Trigger: CCGTGGACCTGGTGGGCGGCACGTCCATTGGCTCTT...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGGGCCCGCTGCTTCGTaGGGCTGGCGCTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAGPAAS*GWRCAP
Trigger: AGGAGCGCAGCGCCAGCCGCACGAAGCAGCGGGCCC...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCCACTCCCGGGCCCGCTaGTTCGTGCGGCTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAHSRAR*FVRLAL
Trigger: CAGCGCCAGCCGCACGAAGCAGCGGGCCCGGGAGTG...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGAGCCCGACAGCGTCATaGTGGCGCGCACGTACCGCC +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRSPTAS*WRARTA
Trigger: GGCGGTACGTGCGCGCCAGCATGACGCTGTCGGGCT...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAAGCCCGACAGCGTCATaGTGGCGCGCACGTACCGCC +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAASPTAS*WRARTA
Trigger: GGCGGTACGTGCGCGCCAGCATGACGCTGTCGGGCT...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCCCGTTTTGGCACCCATaGTGCGGGCGATGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSPFWHP*CGRCPL
Trigger: CAGCGGACATCGCCCGCAGCATGGGTGCCAAAACGG...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGATGCTTGGGGTGGCGTaGGCTTGCAAGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQMLGVA*ACKALL
Trigger: CAGCAGCGCCTTGCAAGCCCACGCCACCCCAAGCAT...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCTGGGATGCTTGGGGTaGCGTGGGCTTGCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGLGCLG*RGLARR
Trigger: GCGCCTTGCAAGCCCACGCCACCCCAAGCATCCCAG...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGCTGGGATGCTTGGGGTaGCGTGGGCTTGCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRLGCLG*RGLARR
Trigger: GCGCCTTGCAAGCCCACGCCACCCCAAGCATCCCAG...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGAGTCCTGGGATGCTTaGGGTGGCGTGGGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGESWDA*GGVGLQ
Trigger: TTGCAAGCCCACGCCACCCCAAGCATCCCAGGACTC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCTGCGTGGCCGGGAGGTaGCGGAGACAGAGGTATCCA +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSCVAGR*RRQRYP
Trigger: TGGATACCTCTGTCTCCGCCACCTCCCGGCCACGCA...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCTTTCTTCCTCATGCGTaGCCGGGAGGTGGCGGAGAC +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGFLPHA*PGGGGD
Trigger: GTCTCCGCCACCTCCCGGCCACGCATGAGGAAGAAA...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAGTGGCTTCTCGAAGTaGCCCAGCACCCGGACGTTC +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGSGFSK*PSTRTF
Trigger: GAACGTCCGGGTGCTGGGCCACTTCGAGAAGCCACT...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGACCCTGGCCCAGCCGCTaGAAGACCATGTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGPWPSR*KTMWRQ
Trigger: CTGCCGCCACATGGTCTTCCAGCGGCTGGGCCAGGG...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGTAGATGCTGGCATCTaGCTGGCCCGGCCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSVDAGI*LARPED
Trigger: GTCTTCCGGCCGGGCCAGCCAGATGCCAGCATCTAC...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCACTTCCCGTCAGGCCCTaGCAGACAGAGCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQALPVRP*QTELQQ
Trigger: CTGCTGGAGCTCTGTCTGCCAGGGCCTGACGGGAAG...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGTTGGGAGGCCGGGGCTaGGGAACAGACGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRLGGRG*GTDAGA
Trigger: AGCCCCTGCGTCTGTTCCCCAGCCCCGGCCTCCCAA...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCACGAGGCTCCTGAGTaGGGGTCCGAGCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRHEAPE*GSERGL
Trigger: CAGCCCCCGCTCGGACCCCCACTCAGGAGCCTCGTG...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCTGCAGGCTCACGTCCTaGTCTCCCTGGCGGGCAATG +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSCRLTS*SPWRAM
Trigger: CATTGCCCGCCAGGGAGACCAGGACGTGAGCCTGCA...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR CCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGAGCATCTGCTCCAGCTaGCCGAGGGTAGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQSICSS*PRVGSW
Trigger: CCAGGAGCCTACCCTCGGCCAGCTGGAGCAGATGCT...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGCCGGTCCGCGCGCCTaGAGAAAACCTTCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGAGPRA*RKPSRR
Trigger: TCTACGAGAAGGTTTTCTCCAGGCGCGCGGACCGGC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGCCGAAGTCATGCTCTTaGCCCACTCCCGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRPKSCS*PTPGPA
Trigger: AGCGGGCCCGGGAGTGGGCCAAGAGCATGACTTCGG...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCCGACAGCGTCATGCTaGCGCGCACGTACCGCCACA +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGPTASC*RARTAT
Trigger: TGTGGCGGTACGTGCGCGCCAGCATGACGCTGTCGG...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGAGCCGGGCGGCTCCTaGGGCAGACAGCGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGREPGGS*GRQRRC
Trigger: GCAACGACGCTGTCTGCCCCAGGAGCCGCCCGGCTC...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTGTCCTCAGGCATCTGTaGCTGAGCCGGGCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGVLRHL*LSRAAP
Trigger: AGGAGCCGCCCGGCTCAGCCACAGATGCCTGAGGAC...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGCGCCAGGACGTCCTaGAACCCATCCCTCTCCGCC +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAGARTS*NPSLSA
Trigger: GGCGGAGAGGGATGGGTTCCAGGACGTCCTGGCGCC...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414982.7
ENST00000600737.6
CDS-3UTR TCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGTGCTCACGAGGCTCCTaGGTGGGGGTCCGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPCSRGS*VGVRAG
Trigger: CCCCGCTCGGACCCCCACTCAGGAGCCTCGTGAGCA...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCTCCACCACGCCGATaGGGTCGCCGCGGCCGTACT +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPPPPRR*GRRGRT
Trigger: AGTACGGCCGCGGCGACCTCATCGGCGTGGTGGAGG...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATACCGGCGTTTGATGTaGCCCAAGGTGCCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAYRRLM*PKVPSG
Trigger: TCCCGAGGGCACCTTGGGTCACATCAAACGCCGGTA...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGCGGGTACCGGCGTTTaGTGTGACCCAAGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGAGTGV*CDPRCP
Trigger: AGGGCACCTTGGGTCACATCAAACGCCGGTACCCGC...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGGCGGGTACCGGCGTTTaGTGTGACCCAAGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRAGTGV*CDPRCP
Trigger: AGGGCACCTTGGGTCACATCAAACGCCGGTACCCGC...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTTGCTGGCTGGGTTGGTaGGTTCCGAGTGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGCWLGW*VPSVGA
Trigger: TGCCCCCACACTCGGAACTCACCAACCCAGCCAGCA...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGCTGCAGCTCCAGCGTaGAGGCCACCATGGGGACCT +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGAAAPA*RPPWGP
Trigger: AGGTCCCCATGGTGGCCTTCACGCTGGAGCTGCAGC...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCTGGGCCAGCCACCCTaGCAGCCGGAACTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGLGQPP*QPELLD
Trigger: ATCCAAGAGTTCCGGCTGTCAGGGTGGCTGGCCCAG...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATGTAGCCGCCATCCATaGGTAGGTGCCCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQACSRHP*VGARPW
Trigger: CCAAGGACGGGCACCTACTCATGGATGGCGGCTACA...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGTCAGGCATCTGTGGCTaGGCCGGGCGGCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPSGICG*AGRLLG
Trigger: CCCCAGGAGCCGCCCGGCTCAGCCACAGATGCCTGA...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGTGGGAGGGAGGGGGTaGCCCCTGTCGAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRVGGRG*PLSRSS
Trigger: TGAGGACCTCGACAGGGGTCACCCCCTCCCTCCCAC...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGGGCTTGCAAGGCGCTaGTGGTTTTTGCCGGGGATT +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGGLARR*WFLPGI
Trigger: AATCCCCGGCAAAAACCAGCAGCGCCTTGCAAGCCC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR GCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGGGGTGGCGTGGGCTTaGAAGGCGCTGCTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSGVAWA*KALLVF
Trigger: AAAAACCAGCAGCGCCTTGCAAGCCCACGCCACCCC...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR GCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAGGGGTGGCGTGGGCTTaGAAGGCGCTGCTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAGVAWA*KALLVF
Trigger: AAAAACCAGCAGCGCCTTGCAAGCCCACGCCACCCC...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR GCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGTCAGTTTCTTCCTCATaGGTGGCCGGGAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQSVSSS*VAGRWR
Trigger: CCGCCACCTCCCGGCCACGCATGAGGAAGAAACTGA...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCCTGCACCACGTAGATaGTGGCATCTGGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGPAPRR*WHLAGP
Trigger: CGGGCCAGCCAGATGCCAGCATCTACGTGGTGCAGG...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATACCTGCACCACGTAGATaGTGGCATCTGGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIPAPRR*WHLAGP
Trigger: CGGGCCAGCCAGATGCCAGCATCTACGTGGTGCAGG...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGAGCGGGGGCCACCCTaGAAGCCTGAGATGTCCCCT +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGERGPP*KPEMSP
Trigger: AGGGGACATCTCAGGCTTGCAGGGTGGCCCCCGCTC...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGTATTCACAGGCGCCTaGCGGCTGCTCACGAGGCTC +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGVFTGA*RLLTRL
Trigger: GAGCCTCGTGAGCAGCCGGCAGGCGCCTGTGAATAC...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGTATTCACAGGCGCCTaGCGGCTGCTCACGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIVFTGA*RLLTRL
Trigger: GAGCCTCGTGAGCAGCCGGCAGGCGCCTGTGAATAC...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCTGCCTCGAAGATGCTaGTGGTCTGGCGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGLPRRC*WSGGPG
Trigger: ACCAGGGCCGCCAGACCAGCAGCATCTTCGAGGCAG...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGGCCAGCTCCTGCTTTaGTGCCTCGAAGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGGQLLL*CLEDAA
Trigger: AGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGACCAGTTCCCCGGGCTaGGCTACGAACAGGCACACG +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGTSSPG*ATNRHT
Trigger: CGTGTGCCTGTTCGTAGCGCAGCCCGGGGAACTGGT...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGTGAGCACCGCCAGCTaGCCCACCAGTTCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAVSTAS*PTSSPG
Trigger: GCCCGGGGAACTGGTGGGGCAGCTGGCGGTGCTCAC...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAAGATCCGCAGGAAGGTaGAGTCGCGTTGGGCTCGCA +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQARSAGR*SRVGLA
Trigger: TGCGAGCCCAACGCGACTGCACCTTCCTGCGGATCT...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCACTGGCTGCCACCGTGTaGGCCGCACTCAGCACCACA +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAALAATV*AALSTT
Trigger: TGTGGTGCTGAGTGCGGCGCACACGGTGGCAGCCAG...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGACTGGCTGCCACCGTGTaGGCCGCACTCAGCACCACA +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGLAATV*AALSTT
Trigger: TGTGGTGCTGAGTGCGGCGCACACGGTGGCAGCCAG...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGTCCCGCCTCCACTaGAGTCCAGTCGATGGCGAA +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIASRLH*SPVDGE
Trigger: TTCGCCATCGACTGGACTGCAGTGGAGGCGGGACGC...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGGCGGGTCACGACCTaGGGGTACCGGCGTTTGATG +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRRRVTT*GYRRLM
Trigger: CATCAAACGCCGGTACCCGCAGGTCGTGACCCGCCT...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGAGGCCCCCAGGCGTaGCCGGATGATGTCACTGTT +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGGGPQA*PDDVTV
Trigger: AACAGTGACATCATCCGGGCACGCCTGGGGGCCTCC...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGTTGGATGCTATCCAGTaGGGAGGCCCCCAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRLDAIQ*GGPQAC
Trigger: GCACGCCTGGGGGCCTCCGCACTGGATAGCATCCAA...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGACGGTGTGCATCCTCCTaGTGGGCCAGCCACCCTGAC +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGRCASS*WASHPD
Trigger: GTCAGGGTGGCTGGCCCAGCAGGAGGATGCACACCG...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCTGGAGCAGGACTAGCTaGTTAAGGGCGCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSWSRTS*LRARTA
Trigger: GGCTGTGCGCGCCCTTAAGCAGCTAGTCCTGCTCCA...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCTTAGCCACTCCACGGTaGGCGTGGGGCCCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWALATPR*AWGPRP
Trigger: AGGGCGCGGGCCCCACGCGCACCGTGGAGTGGCTAA...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCCGCGGACAGCGCAGGTaGAGGTGCCCCGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWARGQRR*RCPEHQ
Trigger: CTGGTGCTCGGGGCACCTGCACCTGCGCTGTCCGCG...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGAAGAGCCAATGGACGTaGCGCCCACCAGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGKSQWT*RPPGPR
Trigger: CCGTGGACCTGGTGGGCGGCACGTCCATTGGCTCTT...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCACACTCCCGGGCCCGCTaGTTCGTGCGGCTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSHSRAR*FVRLAL
Trigger: CAGCGCCAGCCGCACGAAGCAGCGGGCCCGGGAGTG...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCTTTTGGCACCCATGCTaGGGGCGATGTCCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSFWHPC*GRCPLA
Trigger: TGCCAGCGGACATCGCCCGCAGCATGGGTGCCAAAA...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATTTTGGCACCCATGCTaGGGGCGATGTCCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAFWHPC*GRCPLA
Trigger: TGCCAGCGGACATCGCCCGCAGCATGGGTGCCAAAA...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGCCGTTTTGGCACCCATaGTGCGGGCGATGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRPFWHP*CGRCPL
Trigger: CAGCGGACATCGCCCGCAGCATGGGTGCCAAAACGG...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGGCAGACAGCGTCGTTaGCGGAGAATCGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGGRQRR*RRIDFS
Trigger: GGAGAAGTCGATTCTCCGGCAACGACGCTGTCTGCC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGTCTGTCAGCAGCCTaGAGGCAGGTCCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRSLSAA*RQVPTG
Trigger: CCCTGTGGGGACCTGCCTGCAGGCTGCTGACAGACT...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450331.7
CDS-3UTR CCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGAGTCCTGGGATGCTTaGGGTGGCGTGGGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQESWDA*GGVGLQ
Trigger: TTGCAAGCCCACGCCACCCCAAGCATCCCAGGACTC...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCTCGGTTGATTCCAGCTaGACGGCCGATCTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGSVDSS*TADLVA
Trigger: GGCTACCAGATCGGCCGTCCAGCTGGAATCAACCGA...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGTGCGTGGCCGGGAGGTaGCGGAGACAGAGGTATCCA +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGCVAGR*RRQRYP
Trigger: TGGATACCTCTGTCTCCGCCACCTCCCGGCCACGCA...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGCCTTCCGCTGCAGCGTaGGCGTCTCTTTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQPSAAA*ASLSGC
Trigger: GCATCCAGAAAGAGACGCCCACGCTGCAGCGGAAGG...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATACTTCCCGTCAGGCCCTaGCAGACAGAGCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGILPVRP*QTELQQ
Trigger: CTGCTGGAGCTCTGTCTGCCAGGGCCTGACGGGAAG...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCAGCCCCGCACAGGGCTaGTGCGAGTTGGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWASPAQG*CELGGR
Trigger: CCGGCCTCCCAACTCGCACCAGCCCTGTGCGGGGCT...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCATCGGGTGGCCGCCCTaGGGTCTCCCTGGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAIGWPP*GLPGLV
Trigger: GACGAGCCCAGGGAGACCCCAGGGCGGCCACCCGAT...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAGGGTTTCCAGGGATGTaGGCTTCACAGGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAGFPGM*ASQGPL
Trigger: CAGGGGACCCTGTGAAGCCCACATCCCTGGAAACCC...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGATGTCCCCTGGCATaGAGACGCAGCGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSRCPLA*RRSGSA
Trigger: TGCTGAGCCGCTGCGTCTCCATGCCAGGGGACATCT...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGAGATGTCCCCTGGCATaGAGACGCAGCGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQRCPLA*RRSGSA
Trigger: TGCTGAGCCGCTGCGTCTCCATGCCAGGGGACATCT...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCCTGCAGTCCAGTCGATaGCGAAGTCCATCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGLQSSR*RSPSGA
Trigger: TGCGCCAGATGGACTTCGCCATCGACTGGACTGCAG...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTTTGCCACTGCCTCGCTaGATCACGCTACGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGLPLPR*ITLRSR
Trigger: GCGGCTGCGTAGCGTGATCCAGCGAGGCAGTGGCAA...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGTTGCCACTGCCTCGCTaGATCACGCTACGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRLPLPR*ITLRSR
Trigger: GCGGCTGCGTAGCGTGATCCAGCGAGGCAGTGGCAA...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCATGCCCTCGGGAAGCTTaGCCAGCTCCGTGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAACPREA*PAPCRA
Trigger: TGCGCGACACGGAGCTGGCCAAGCTTCCCGAGGGCA...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCACAACCCAGAGCCTGCTaGGAAGGGTCCTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAQPRAC*EGSLQL
Trigger: CAGCTGCAAGGACCCTTCCCAGCAGGCTCTGGGTTG...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
CDS-3UTR CCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGGTGAGTTCCGAGTGTaGGGGCACACCCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQGEFRV*GHTQPR
Trigger: TCTGGGTTGGGTGTGCCCCCACACTCGGAACTCACC...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGTAGCGTCGGACCGATaGCCTGCAGGGCGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRVASDR*PAGRAA
Trigger: TGCAGCACGCCCTGCAGGCCATCGGTCCGACGCTAC...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGTAGCGTCGGACCGATaGCCTGCAGGGCGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGVASDR*PAGRAA
Trigger: TGCAGCACGCCCTGCAGGCCATCGGTCCGACGCTAC...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTTGTGCATCCTCCTGCTaGGCCAGCCACCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGCASSC*ASHPDS
Trigger: GCTGTCAGGGTGGCTGGCCCAGCAGGAGGATGCACA...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCTGCTTCGTGCGGCTaGCGCTGCGCTCCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAAASCG*RCAPPR
Trigger: ACGCGGAGGAGCGCAGCGCCAGCCGCACGAAGCAGC...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGCGGGCGATGTCCGCTaGCAGATTGTTGATGTAGCC +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGAGDVR*QIVDVA
Trigger: GGCTACATCAACAATCTGCCAGCGGACATCGCCCGC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCTCTCGGAGGCAGTGCTaGGGCTTGCGCCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWASRRQC*GLRPRG
Trigger: CCCCCGAGGGCGCAAGCCCCAGCACTGCCTCCGAGA...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGAGCCGGGCGGCTCCTaGGGCAGACAGCGTCGTTGC +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAEPGGS*GRQRRC
Trigger: GCAACGACGCTGTCTGCCCCAGGAGCCGCCCGGCTC...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGTCCTCAGGCATCTGTaGCTGAGCCGGGCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGVLRHL*LSRAAP
Trigger: AGGAGCCGCCCGGCTCAGCCACAGATGCCTGAGGAC...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCACACCTGCCGAGACGTaGGGGGTATGGGAACATCAG +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGTPAET*GVWEHQ
Trigger: CTGATGTTCCCATACCCCCCACGTCTCGGCAGGTGT...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000545201.6
CDS-3UTR TCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCTTGGAAGGCCGACTaGGGCCGCCATGCTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRAWKAD*GRHAEC
Trigger: ACACTCAGCATGGCGGCCTCAGTCGGCCTTCCAAGC...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000221249.10
CDS-3UTR TCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGAGCCTCCATCGGTTaGTTCCAGCTGGACGGCCGA +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRGASIG*FQLDGR
Trigger: TCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCC...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR TCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGGGCTCGTCTGTAGCTaGGGTGCTGACCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGGLVCS*GADHSL
Trigger: AAGAGAATGGTCAGCACCTCAGCTACAGACGAGCCC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTTGCTCACGAGGCTCCTaGGTGGGGGTCCGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSCSRGS*VGVRAG
Trigger: CCCCGCTCGGACCCCCACTCAGGAGCCTCGTGAGCA...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCACTCCCTGGCGGGCAATaGTGGTGCCAGCTTTGGCGT +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAALPGGQ*WCQLWR
Trigger: ACGCCAAAGCTGGCACCATCATTGCCCGCCAGGGAG...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR TCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCACCTCCACCACGCCGATaGGGTCGCCGCGGCCGTACT +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSPPPRR*GRRGRT
Trigger: AGTACGGCCGCGGCGACCTCATCGGCGTGGTGGAGG...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGTACCGGCGTTTGATGTaGCCCAAGGTGCCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGYRRLM*PKVPSG
Trigger: TCCCGAGGGCACCTTGGGTCACATCAAACGCCGGTA...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGTACCGGCGTTTGATGTaGCCCAAGGTGCCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRYRRLM*PKVPSG
Trigger: TCCCGAGGGCACCTTGGGTCACATCAAACGCCGGTA...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCATGCTGGCTGGGTTGGTaGGTTCCGAGTGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAACWLGW*VPSVGA
Trigger: TGCCCCCACACTCGGAACTCACCAACCCAGCCAGCA...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGACTGGGCCAGCCACCCTaGCAGCCGGAACTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGLGQPP*QPELLD
Trigger: ATCCAAGAGTTCCGGCTGTCAGGGTGGCTGGCCCAG...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGCTGGGCCAGCCACCCTaGCAGCCGGAACTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRLGQPP*QPELLD
Trigger: ATCCAAGAGTTCCGGCTGTCAGGGTGGCTGGCCCAG...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCACTGGGCCAGCCACCCTaGCAGCCGGAACTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAALGQPP*QPELLD
Trigger: ATCCAAGAGTTCCGGCTGTCAGGGTGGCTGGCCCAG...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAGTGGACTCGCATGGCTaGGGCGGTGATATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAVDSHG*GGDICG
Trigger: ACCACAGATATCACCGCCTCAGCCATGCGAGTCCAC...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGTGGACTCGCATGGCTaGGGCGGTGATATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSVDSHG*GGDICG
Trigger: ACCACAGATATCACCGCCTCAGCCATGCGAGTCCAC...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGTGTAGCCGCCATCCATaGGTAGGTGCCCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGCSRHP*VGARPW
Trigger: CCAAGGACGGGCACCTACTCATGGATGGCGGCTACA...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGCAAAGTCCATGGTCTTaGAGCAGTCGATGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQQSPWS*SSRWAG
Trigger: GCCCGCCCATCGACTGCTTCAAGACCATGGACTTTG...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAATCACGCCAAGCACCTaGGGGACGAACGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGITPST*GTNGTG
Trigger: GCCAGTGCCGTTCGTCCCTCAGGTGCTTGGCGTGAT...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414982.7
ENST00000600737.6
CDS-3UTR TCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGTTCGTAGCCAGCCCGTaGCTCGATGTCCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRFVASP*LDVPIC
Trigger: GCAGATGGGGACATCGAGTCACGGGCTGGCTACGAA...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600737.6
CDS-3UTR GCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGGGGTGGCGTGGGCTTaGAAGGCGCTGCTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIGVAWA*KALLVF
Trigger: AAAAACCAGCAGCGCCTTGCAAGCCCACGCCACCCC...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR GCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGAAGAGTCCTGGGATaGTTGGGGTGGCGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSRRVLG*LGWRGL
Trigger: AAGCCCACGCCACCCCAAGCATCCCAGGACTCTTCT...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR GCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGAGAAGAGTCCTGGGATaGTTGGGGTGGCGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQRRVLG*LGWRGL
Trigger: AAGCCCACGCCACCCCAAGCATCCCAGGACTCTTCT...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGTTGCTGCCTCGAAGATaGTGCTGGTCTGGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGLLPRR*CWSGGP
Trigger: AGGGCCGCCAGACCAGCAGCATCTTCGAGGCAGCAA...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATATTGCTGCCTCGAAGATaGTGCTGGTCTGGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGILLPRR*CWSGGP
Trigger: AGGGCCGCCAGACCAGCAGCATCTTCGAGGCAGCAA...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGGTGCAGCAAGACTCTaGTGTTCAGGAGGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQGAARL*CSGGRG
Trigger: ACCCCTCCCTCCTGAACAGCAGAGTCTTGCTGCACC...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR GCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCCCCAGAGCACGAAGTaGAGGCTCACGTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGPQSTK*RLTSWS
Trigger: AGACCAGGACGTGAGCCTGCACTTCGTGCTCTGGGG...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCCCCAGAGCACGAAGTaGAGGCTCACGTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGPQSTK*RLTSWS
Trigger: AGACCAGGACGTGAGCCTGCACTTCGTGCTCTGGGG...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCCGCCTTGTCGATCATaGGCTGGTACACGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGPPCRS*AGTRAG
Trigger: GCCTGCACGTGTACCAGCGCATGATCGACAAGGCGG...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTAGATCCGCAGGAAGGTaGAGTCGCGTTGGGCTCGCA +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGRSAGR*SRVGLA
Trigger: TGCGAGCCCAACGCGACTGCACCTTCCTGCGGATCT...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGAGATCCGCAGGAAGGTaGAGTCGCGTTGGGCTCGCA +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGRSAGR*SRVGLA
Trigger: TGCGAGCCCAACGCGACTGCACCTTCCTGCGGATCT...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGGGGCGACATCCTGGCTaGCACCGTGTGCGCCGCACT +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPGRHPG*HRVRRT
Trigger: AGTGCGGCGCACACGGTGGCAGCCAGGATGTCGCCC...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGCGTCCCGCCTCCACTaGAGTCCAGTCGATGGCGAA +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGASRLH*SPVDGE
Trigger: TTCGCCATCGACTGGACTGCAGTGGAGGCGGGACGC...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCGTCCCGCCTCCACTaGAGTCCAGTCGATGGCGAA +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRASRLH*SPVDGE
Trigger: TTCGCCATCGACTGGACTGCAGTGGAGGCGGGACGC...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAGCTCCTTCTTGCCACTaGCTCGCTGGATCACGCTAC +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAAPSCH*LAGSRY
Trigger: GTAGCGTGATCCAGCGAGGCAGTGGCAAGAAGGAGC...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCCGGCTGCCGGGTCAGTaGCTCCACCACGCCGATGAG +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWARLPGQ*LHHADE
Trigger: CTCATCGGCGTGGTGGAGGCACTGACCCGGCAGCCG...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCGTGGCTCGCGGCTaGCGGGTCAGTGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSVVARG*RVSAST
Trigger: GGTGGAGGCACTGACCCGGCAGCCGCGAGCCACGAC...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTGTCGTGGCTCGCGGCTaGCGGGTCAGTGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSVVARG*RVSAST
Trigger: GGTGGAGGCACTGACCCGGCAGCCGCGAGCCACGAC...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCTGCAGGGCGTGCTaGAGCTCCAGCGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAACRAC*SSSVKA
Trigger: GGCCTTCACGCTGGAGCTGCAGCACGCCCTGCAGGC...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGTCGGACCGATGGCCTaGAGGGCGTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAVGPMA*RACCSS
Trigger: GGAGCTGCAGCACGCCCTGCAGGCCATCGGTCCGAC...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGCCGGAACTCTTGGATaGTATCCAGTGCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGAGTLG*YPVRRP
Trigger: GGGCCTCCGCACTGGATAGCATCCAAGAGTTCCGGC...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTTGGAGCAGGACTAGCTaGTTAAGGGCGCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGWSRTS*LRARTA
Trigger: GGCTGTGCGCGCCCTTAAGCAGCTAGTCCTGCTCCA...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGGCAGCTTGGCAGGGCTaGGGCGCGAAAAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPAAWQG*GAKRGG
Trigger: GCCGCCTCTTTTCGCGCCGCAGCCCTGCCAAGCTGC...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTTTTAGTACTCCGATGTaGGAGCAGCCCCTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGFSTPM*EQPLAP
Trigger: CGGGGCCAGGGGCTGCTCGCACATCGGAGTACTAAA...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGTTTAGTACTCCGATGTaGGAGCAGCCCCTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRFSTPM*EQPLAP
Trigger: CGGGGCCAGGGGCTGCTCGCACATCGGAGTACTAAA...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGGGCCCGCTGCTTCGTaGGGCTGGCGCTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWGPAAS*GWRCAP
Trigger: AGGAGCGCAGCGCCAGCCGCACGAAGCAGCGGGCCC...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGCCGTTTTGGCACCCATaGTGCGGGCGATGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRPFWHP*CGRCPL
Trigger: CAGCGGACATCGCCCGCAGCATGGGTGCCAAAACGG...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCCCATCTCGGAGGCAGTaGTGGGGCTTGCGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAPSRRQ*WGLRPR
Trigger: CCGAGGGCGCAAGCCCCAGCACTGCCTCCGAGATGG...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATCATCAGTGCAACACTaGATCCCCGCTCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQASSVQH*IPAQGR
Trigger: CCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGA...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAACGAACGGCACTGGCTaGGCACCGCAAATCCGTCCC +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAATNGTG*APQIRP
Trigger: GGGACGGATTTGCGGTGCGCAGCCAGTGCCGTTCGT...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414982.7
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCACCCCAGAGCACGAAGTaGAGGCTCACGTCCTCAATC +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAPQSTK*RLTSSI
Trigger: GATTGAGGACGTGAGCCTGCACTTCGTGCTCTGGGG...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545201.6
CDS-3UTR CCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGCACAGAGCATCACTaGGACTCCGGGACCGATGGT +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGGTEHH*DSGTDG
Trigger: ACCATCGGTCCCGGAGTCCCAGTGATGCTCTGTGCC...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAATGCTTGGGGTGGCGTaGGCTTGCAAGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAMLGVA*ACKALL
Trigger: CAGCAGCGCCTTGCAAGCCCACGCCACCCCAAGCAT...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGTTTCAGAAGAGTCCTaGGATGCTTGGGGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGVSEES*DAWGGV
Trigger: CACGCCACCCCAAGCATCCCAGGACTCTTCTGAAAC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGTCGGTTGATTCCAGCTaGACGGCCGATCTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQSVDSS*TADLVA
Trigger: GGCTACCAGATCGGCCGTCCAGCTGGAATCAACCGA...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGATGCGTGGCCGGGAGGTaGCGGAGACAGAGGTATCCA +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGCVAGR*RRQRYP
Trigger: TGGATACCTCTGTCTCCGCCACCTCCCGGCCACGCA...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAACTTCAGAGGGCAGATaGGAGTTAGCCAGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQATSEGR*ELARSP
Trigger: GGGCGACCTGGCTAACTCCCATCTGCCCTCTGAAGT...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTAGTGGCTTCTCGAAGTaGCCCAGCACCCGGACGTTC +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGSGFSK*PSTRTF
Trigger: GAACGTCCGGGTGCTGGGCCACTTCGAGAAGCCACT...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGTGGCTTCTCGAAGTaGCCCAGCACCCGGACGTTC +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRSGFSK*PSTRTF
Trigger: GAACGTCCGGGTGCTGGGCCACTTCGAGAAGCCACT...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGCGCTGGAAGACCATGTaGCGGCAGAGCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRRWKTM*RQSSRK
Trigger: CTTCCTGGAGCTCTGCCGCCACATGGTCTTCCAGCG...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCCCCTGGCCCAGCCGCTaGAAGACCATGTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAPWPSR*KTMWRQ
Trigger: CTGCCGCCACATGGTCTTCCAGCGGCTGGGCCAGGG...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGTAGATGCTGGCATCTaGCTGGCCCGGCCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRVDAGI*LARPED
Trigger: GTCTTCCGGCCGGGCCAGCCAGATGCCAGCATCTAC...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGACTTCCCGTCAGGCCCTaGCAGACAGAGCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGLPVRP*QTELQQ
Trigger: CTGCTGGAGCTCTGTCTGCCAGGGCCTGACGGGAAG...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGCTTCCCGTCAGGCCCTaGCAGACAGAGCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRLPVRP*QTELQQ
Trigger: CTGCTGGAGCTCTGTCTGCCAGGGCCTGACGGGAAG...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTAGCCCCGCACAGGGCTaGTGCGAGTTGGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSSPAQG*CELGGR
Trigger: CCGGCCTCCCAACTCGCACCAGCCCTGTGCGGGGCT...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGCCCGGTGGGATCGGGTaGCCGCCCTGGGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWPGGIG*PPWGLP
Trigger: AGGGAGACCCCAGGGCGGCCACCCGATCCCACCGGG...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCACACGAGGCTCCTGAGTaGGGGTCCGAGCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSHEAPE*GSERGL
Trigger: CAGCCCCCGCTCGGACCCCCACTCAGGAGCCTCGTG...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGAAGGGCAGCCACCAGTaGCCGACTCATCCTCACAGT +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQKGSHQ*PTHPHS
Trigger: ACTGTGAGGATGAGTCGGCCACTGGTGGCTGCCCTT...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCACCTCGAAGATGCTGCTaGTCTGGCGGCCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAPRRCC*SGGPGR
Trigger: CCTACCAGGGCCGCCAGACCAGCAGCATCTTCGAGG...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGTGCCAGCTTTGGCGTaGTGCAGCAAGACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSVPALA*CSKTLL
Trigger: CAGCAGAGTCTTGCTGCACCACGCCAAAGCTGGCAC...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR CCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGACGTCCTGGTCTCCCTaGCGGGCAATGATGGTGCCA +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRTSWSP*RAMMVP
Trigger: TGGCACCATCATTGCCCGCCAGGGAGACCAGGACGT...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAAGGTGCAGTCGCGTTaGGCTCGCAGTGTGAAGATG +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGKVQSR*ARSVKM
Trigger: CATCTTCACACTGCGAGCCCAACGCGACTGCACCTT...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCCGAAGGGCGACATCCTaGCTGCCACCGTGTGCGCCG +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWARRATS*LPPCAP
Trigger: CGGCGCACACGGTGGCAGCCAGGATGTCGCCCTTCG...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCCTGCAGTCCAGTCGATaGCGAAGTCCATCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSLQSSR*RSPSGA
Trigger: TGCGCCAGATGGACTTCGCCATCGACTGGACTGCAG...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGGGTGAGTTCCGAGTGTaGGGGCACACCCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRGEFRV*GHTQPR
Trigger: TCTGGGTTGGGTGTGCCCCCACACTCGGAACTCACC...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGGTGAGTTCCGAGTGTaGGGGCACACCCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIGEFRV*GHTQPR
Trigger: TCTGGGTTGGGTGTGCCCCCACACTCGGAACTCACC...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTGAGTTCCGAGTGTaGGGGCACACCCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGGEFRV*GHTQPR
Trigger: TCTGGGTTGGGTGTGCCCCCACACTCGGAACTCACC...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCATGTGCATCCTCCTGCTaGGCCAGCCACCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAACASSC*ASHPDS
Trigger: GCTGTCAGGGTGGCTGGCCCAGCAGGAGGATGCACA...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTGCGCCCTCCTCTCGGTaGAGCAGGACTAGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGAPSSR*SRTSCL
Trigger: TAAGCAGCTAGTCCTGCTCCACCGAGAGGAGGGCGC...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGAGAGCTCATGCAGCTTaGCAGGGCTGCGGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGRAHAA*QGCGAK
Trigger: TTTCGCGCCGCAGCCCTGCCAAGCTGCATGAGCTCT...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGAGGGAGCCATCTTTGTaGACTCGCATGGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQREPSL*TRMAEA
Trigger: CGCCTCAGCCATGCGAGTCCACAAAGATGGCTCCCT...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCCGACAGCGTCATGCTaGCGCGCACGTACCGCCACA +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRPTASC*RARTAT
Trigger: TGTGGCGGTACGTGCGCGCCAGCATGACGCTGTCGG...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAGTGAAGCCAGAGCTTaGGAAGGCAAGCACGTCTGC +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGSEARA*EGKHVC
Trigger: GCAGACGTGCTTGCCTTCCCAAGCTCTGGCTTCACT...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGCAGAGACATAGCTCGTaGGGGGCTCAATCCGGGACA +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQQRHSS*GAQSGT
Trigger: TGTCCCGGATTGAGCCCCCCACGAGCTATGTCTCTG...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCCAGAGACATAGCTCGTaGGGGGCTCAATCCGGGACA +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSQRHSS*GAQSGT
Trigger: TGTCCCGGATTGAGCCCCCCACGAGCTATGTCTCTG...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCATCTCGGAGGCAGTGCTaGGGCTTGCGCCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSSRRQC*GLRPRG
Trigger: CCCCCGAGGGCGCAAGCCCCAGCACTGCCTCCGAGA...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTTCTCGGAGGCAGTGCTaGGGCTTGCGCCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSSRRQC*GLRPRG
Trigger: CCCCCGAGGGCGCAAGCCCCAGCACTGCCTCCGAGA...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGAGGGACGAACGGCACTaGCTGCGCACCGCAAATCCG +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRRDERH*LRTANP
Trigger: CGGATTTGCGGTGCGCAGCCAGTGCCGTTCGTCCCT...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414982.7
ENST00000600737.6
CDS-3UTR CCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGAGCTGGCTACCGGTGTaGAAACACCTGCCGAGACGT +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQSWLPV*KHLPRR
Trigger: ACGTCTCGGCAGGTGTTTCCACACCGGTAGCCAGCT...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545201.6
CDS-3UTR CCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCACCTCAGGGCACAGCTaGCTACCGGTGTGGAAACAC +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSTSGHS*LPVWKH
Trigger: GTGTTTCCACACCGGTAGCCAGCTGTGCCCTGAGGT...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545201.6
CDS-3UTR CCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGGACTCCGGGACCGATaGTGGCGCCATTGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSGLRDR*WRHCWK
Trigger: TTTCCAACAATGGCGCCACCATCGGTCCCGGAGTCC...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545201.6
CDS-3UTR TCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCTGGATCTCGTGGCTaGAGAGCTCATTGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQAGSRG*RAHWSD
Trigger: GTCTGACCAATGAGCTCTTCAGCCACGAGATCCAGC...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGTGCTCACGAGGCTCCTaGGTGGGGGTCCGAGCGGGG +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWCSRGS*VGVRAG
Trigger: CCCCGCTCGGACCCCCACTCAGGAGCCTCGTGAGCA...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGTACGCAGCCGCCCATTaGGCACGATGTAAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQYAAAH*ARCKCS
Trigger: ACTGCACTTACATCGTGCTCAATGGGCGGCTGCGTA...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGTACCGGCGTTTGATGTaGCCCAAGGTGCCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRYRRLM*PKVPSG
Trigger: TCCCGAGGGCACCTTGGGTCACATCAAACGCCGGTA...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCATACCGGCGTTTGATGTaGCCCAAGGTGCCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAYRRLM*PKVPSG
Trigger: TCCCGAGGGCACCTTGGGTCACATCAAACGCCGGTA...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGATGTAGCCGCCATCCATaGGTAGGTGCCCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGCSRHP*VGARPW
Trigger: CCAAGGACGGGCACCTACTCATGGATGGCGGCTACA...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGTAGGAGCTGGACTTaGCAACCTCTAGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSSRSWT*QPLAAA
Trigger: TGCGGCAGCTAGAGGTTGTCAAGTCCAGCTCCTACT...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCCTCTGTCAGACAATCTaGCTCCTCTCCGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGLCQTI*LLSVST
Trigger: TGTGCTGACGGAGAGGAGTCAGATTGTCTGACAGAG...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGTCAGGCATCTGTGGCTaGGCCGGGCGGCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWSGICG*AGRLLG
Trigger: CCCCAGGAGCCGCCCGGCTCAGCCACAGATGCCTGA...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGGGCGCGACTCTTCCCTaGGGCCCGGCGGCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLGATLP*GPAARS
Trigger: ACTGCGGGCCGCCGGGCCTCAGGGAAGAGTCGCGCC...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGGCTTGCAAGGCGCTaGTGGTTTTTGCCGGGGATT +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGGLARR*WFLPGI
Trigger: AATCCCCGGCAAAAACCAGCAGCGCCTTGCAAGCCC...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGGGGCTTGCAAGGCGCTaGTGGTTTTTGCCGGGGATT +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRGLARR*WFLPGI
Trigger: AATCCCCGGCAAAAACCAGCAGCGCCTTGCAAGCCC...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR GCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGGGGTGGCGTGGGCTTaGAAGGCGCTGCTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGGVAWA*KALLVF
Trigger: AAAAACCAGCAGCGCCTTGCAAGCCCACGCCACCCC...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR GCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAAGAAGAGTCCTGGGATaGTTGGGGTGGCGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIRRVLG*LGWRGL
Trigger: AAGCCCACGCCACCCCAAGCATCCCAGGACTCTTCT...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR GCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGATCAGTTTCTTCCTCATaGGTGGCCGGGAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGSVSSS*VAGRWR
Trigger: CCGCCACCTCCCGGCCACGCATGAGGAAGAAACTGA...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGTCAGTTTCTTCCTCATaGGTGGCCGGGAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRSVSSS*VAGRWR
Trigger: CCGCCACCTCCCGGCCACGCATGAGGAAGAAACTGA...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGGGGGCTCCTTCCGCTaGAGCGTGGGCGTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAGGSFR*SVGVSF
Trigger: GAAAGAGACGCCCACGCTGCAGCGGAAGGAGCCCCC...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCCTGCACCACGTAGATaGTGGCATCTGGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRPAPRR*WHLAGP
Trigger: CGGGCCAGCCAGATGCCAGCATCTACGTGGTGCAGG...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCACAGGTAGTTGTGCAGTaGCAGGAAGGTGACTCGCTG +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAQVVVQ*QEGDSL
Trigger: CAGCGAGTCACCTTCCTGGCACTGCACAACTACCTG...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGAGCGGGGGCCACCCTaGAAGCCTGAGATGTCCCCT +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAERGPP*KPEMSP
Trigger: AGGGGACATCTCAGGCTTGCAGGGTGGCCCCCGCTC...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCCAGCTCCTGCTTTGCTaGCTCGAAGATGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSQLLLC*LEDAAG
Trigger: ACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTG...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGGTGCAGCAAGACTCTaGTGTTCAGGAGGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIGAARL*CSGGRG
Trigger: ACCCCTCCCTCCTGAACAGCAGAGTCTTGCTGCACC...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGGGTGCAGCAAGACTCTaGTGTTCAGGAGGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRGAARL*CSGGRG
Trigger: ACCCCTCCCTCCTGAACAGCAGAGTCTTGCTGCACC...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR GCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTGGGCGACATCCTGGCTaGCACCGTGTGCGCCGCACT +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSGRHPG*HRVRRT
Trigger: AGTGCGGCGCACACGGTGGCAGCCAGGATGTCGCCC...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGGCTCCTTCTTGCCACTaGCTCGCTGGATCACGCTAC +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRAPSCH*LAGSRY
Trigger: GTAGCGTGATCCAGCGAGGCAGTGGCAAGAAGGAGC...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGCTCCTTCTTGCCACTaGCTCGCTGGATCACGCTAC +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGAPSCH*LAGSRY
Trigger: GTAGCGTGATCCAGCGAGGCAGTGGCAAGAAGGAGC...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGCCACCAGCTCCTTCTTaGCACTGCCTCGCTGGATCA +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRPPAPS*HCLAGS
Trigger: TGATCCAGCGAGGCAGTGGCAAGAAGGAGCTGGTGG...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTCGCGCACCGCGTaGACCGTCGTGGCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSVSRTA*TVVARG
Trigger: GCCGCGAGCCACGACGGTGCACGCGGTGCGCGACAC...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCCAGGATTGCCACAGTTaGCAGGTTGCTGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSQDCHS*QVAGWV
Trigger: AACCCAGCCAGCAACCTGGCAACTGTGGCAATCCTG...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGCAGGATTGCCACAGTTaGCAGGTTGCTGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQQDCHS*QVAGWV
Trigger: AACCCAGCCAGCAACCTGGCAACTGTGGCAATCCTG...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGCCTGCAGGGCGTGCTaGAGCTCCAGCGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSACRAC*SSSVKA
Trigger: GGCCTTCACGCTGGAGCTGCAGCACGCCCTGCAGGC...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCCGGAACTCTTGGATaGTATCCAGTGCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRAGTLG*YPVRRP
Trigger: GGGCCTCCGCACTGGATAGCATCCAAGAGTTCCGGC...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTGAGTACGATACGGTGTaGATCCTCCTGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGEYDTV*ILLLGQ
Trigger: CTGGCCCAGCAGGAGGATGCACACCGTATCGTACTC...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGGAGTACGATACGGTGTaGATCCTCCTGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSREYDTV*ILLLGQ
Trigger: CTGGCCCAGCAGGAGGATGCACACCGTATCGTACTC...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGGTGTTCTCCAGCATCTaGTCCAGCTGGCCGAGGGTA +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRVFSSI*SSWPRV
Trigger: TACCCTCGGCCAGCTGGAGCAGATGCTGGAGAACAC...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTGTGTTCTCCAGCATCTaGTCCAGCTGGCCGAGGGTA +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGVFSSI*SSWPRV
Trigger: TACCCTCGGCCAGCTGGAGCAGATGCTGGAGAACAC...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCATTTAGTACTCCGATGTaGGAGCAGCCCCTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAFSTPM*EQPLAP
Trigger: CGGGGCCAGGGGCTGCTCGCACATCGGAGTACTAAA...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGTTTAGTACTCCGATGTaGGAGCAGCCCCTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRFSTPM*EQPLAP
Trigger: CGGGGCCAGGGGCTGCTCGCACATCGGAGTACTAAA...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGGGCCCGCTGCTTCGTaGGGCTGGCGCTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSGPAAS*GWRCAP
Trigger: AGGAGCGCAGCGCCAGCCGCACGAAGCAGCGGGCCC...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCCGTTTTGGCACCCATaGTGCGGGCGATGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRPFWHP*CGRCPL
Trigger: CAGCGGACATCGCCCGCAGCATGGGTGCCAAAACGG...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGAAGGCAAGCACGTCTaGACGGCGGCTCTCATTAAG +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQEGKHV*TAALIK
Trigger: CTTAATGAGAGCCGCCGTGCAGACGTGCTTGCCTTC...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGCAGACAGCGTCGTTaGCGGAGAATCGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGGRQRR*RRIDFS
Trigger: GGAGAAGTCGATTCTCCGGCAACGACGCTGTCTGCC...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGGCAGACAGCGTCGTTaGCGGAGAATCGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIGRQRR*RRIDFS
Trigger: GGAGAAGTCGATTCTCCGGCAACGACGCTGTCTGCC...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGTCATCAGTGCAACACTaGATCCCCGCTCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGSSVQH*IPAQGR
Trigger: CCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGA...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGTCGAAGGGACACCCCTaGGAGGCTAACGGAAACCCA +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGSKGHP*EANGNP
Trigger: TGGGTTTCCGTTAGCCTCGCAGGGGTGTCCCTTCGA...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545201.6
CDS-3UTR CCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCATGCTTGGGGTGGCGTaGGCTTGCAAGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRMLGVA*ACKALL
Trigger: CAGCAGCGCCTTGCAAGCCCACGCCACCCCAAGCAT...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCCTGGGATGCTTGGGGTaGCGTGGGCTTGCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWALGCLG*RGLARR
Trigger: GCGCCTTGCAAGCCCACGCCACCCCAAGCATCCCAG...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGAGTCCTGGGATGCTTaGGGTGGCGTGGGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGESWDA*GGVGLQ
Trigger: TTGCAAGCCCACGCCACCCCAAGCATCCCAGGACTC...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAGTTTCAGAAGAGTCCTaGGATGCTTGGGGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAVSEES*DAWGGV
Trigger: CACGCCACCCCAAGCATCCCAGGACTCTTCTGAAAC...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCCACGAGGGAGGAGGTaGATTGTGACACCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGPRGRR*IVTPSA
Trigger: TGCGGAAGGTGTCACAATCCACCTCCTCCCTCGTGG...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCATTTCTTCCTCATGCGTaGCCGGGAGGTGGCGGAGAC +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAFLPHA*PGGGGD
Trigger: GTCTCCGCCACCTCCCGGCCACGCATGAGGAAGAAA...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGACCTTCCGCTGCAGCGTaGGCGTCTCTTTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGPSAAA*ASLSGC
Trigger: GCATCCAGAAAGAGACGCCCACGCTGCAGCGGAAGG...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAAGTGGCTTCTCGAAGTaGCCCAGCACCCGGACGTTC +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGSGFSK*PSTRTF
Trigger: GAACGTCCGGGTGCTGGGCCACTTCGAGAAGCCACT...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCACGCTGGAAGACCATGTaGCGGCAGAGCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAARWKTM*RQSSRK
Trigger: CTTCCTGGAGCTCTGCCGCCACATGGTCTTCCAGCG...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCACCCTGGCCCAGCCGCTaGAAGACCATGTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSPWPSR*KTMWRQ
Trigger: CTGCCGCCACATGGTCTTCCAGCGGCTGGGCCAGGG...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGAGGGGCTGGATCTCGTaGCTGAAGAGCTCATTGGTC +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQRGWIS*LKSSLV
Trigger: GACCAATGAGCTCTTCAGCCACGAGATCCAGCCCCT...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTTTGGGAGGCCGGGGCTaGGGAACAGACGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSLGGRG*GTDAGA
Trigger: AGCCCCTGCGTCTGTTCCCCAGCCCCGGCCTCCCAA...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGATCGGGTGGCCGCCCTaGGGTCTCCCTGGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWIGWPP*GLPGLV
Trigger: GACGAGCCCAGGGAGACCCCAGGGCGGCCACCCGAT...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGGTTTCCAGGGATGTaGGCTTCACAGGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAGFPGM*ASQGPL
Trigger: CAGGGGACCCTGTGAAGCCCACATCCCTGGAAACCC...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGAGATGTCCCCTGGCATaGAGACGCAGCGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRRCPLA*RRSGSA
Trigger: TGCTGAGCCGCTGCGTCTCCATGCCAGGGGACATCT...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGCACGAGGCTCCTGAGTaGGGGTCCGAGCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWHEAPE*GSERGL
Trigger: CAGCCCCCGCTCGGACCCCCACTCAGGAGCCTCGTG...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGAAGGGCAGCCACCAGTaGCCGACTCATCCTCACAGT +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGKGSHQ*PTHPHS
Trigger: ACTGTGAGGATGAGTCGGCCACTGGTGGCTGCCCTT...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTAAGGGCAGCCACCAGTaGCCGACTCATCCTCACAGT +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGKGSHQ*PTHPHS
Trigger: ACTGTGAGGATGAGTCGGCCACTGGTGGCTGCCCTT...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCCTCGAAGATGCTGCTaGTCTGGCGGCCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRPRRCC*SGGPGR
Trigger: CCTACCAGGGCCGCCAGACCAGCAGCATCTTCGAGG...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTGTGCCAGCTTTGGCGTaGTGCAGCAAGACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGVPALA*CSKTLL
Trigger: CAGCAGAGTCTTGCTGCACCACGCCAAAGCTGGCAC...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR CCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGTGCCAGCTTTGGCGTaGTGCAGCAAGACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIVPALA*CSKTLL
Trigger: CAGCAGAGTCTTGCTGCACCACGCCAAAGCTGGCAC...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR CCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCTGCAGGCTCACGTCCTaGTCTCCCTGGCGGGCAATG +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRCRLTS*SPWRAM
Trigger: CATTGCCCGCCAGGGAGACCAGGACGTGAGCCTGCA...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAAAGGTGCAGTCGCGTTaGGCTCGCAGTGTGAAGATG +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAKVQSR*ARSVKM
Trigger: CATCTTCACACTGCGAGCCCAACGCGACTGCACCTT...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCGAAGGGCGACATCCTaGCTGCCACCGTGTGCGCCG +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSRRATS*LPPCAP
Trigger: CGGCGCACACGGTGGCAGCCAGGATGTCGCCCTTCG...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGATGGCGAAGTCCATCTaGCGCACGAAGGGCGACATC +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRMAKSI*RTKGDI
Trigger: GATGTCGCCCTTCGTGCGCCAGATGGACTTCGCCAT...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCTGCAGTCCAGTCGATaGCGAAGTCCATCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGLQSSR*RSPSGA
Trigger: TGCGCCAGATGGACTTCGCCATCGACTGGACTGCAG...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCTGCAGTCCAGTCGATaGCGAAGTCCATCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGLQSSR*RSPSGA
Trigger: TGCGCCAGATGGACTTCGCCATCGACTGGACTGCAG...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGCAACCCAGAGCCTGCTaGGAAGGGTCCTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRQPRAC*EGSLQL
Trigger: CAGCTGCAAGGACCCTTCCCAGCAGGCTCTGGGTTG...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
CDS-3UTR CCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGGTGAGTTCCGAGTGTaGGGGCACACCCAACCCAGA +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGGEFRV*GHTQPR
Trigger: TCTGGGTTGGGTGTGCCCCCACACTCGGAACTCACC...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGTGCCAGGTTGCTGGCTaGGTTGGTGAGTTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGCQVAG*VGEFRV
Trigger: CACTCGGAACTCACCAACCCAGCCAGCAACCTGGCA...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTTGCCAGGTTGCTGGCTaGGTTGGTGAGTTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGCQVAG*VGEFRV
Trigger: CACTCGGAACTCACCAACCCAGCCAGCAACCTGGCA...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGTAGCGTCGGACCGATaGCCTGCAGGGCGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAVASDR*PAGRAA
Trigger: TGCAGCACGCCCTGCAGGCCATCGGTCCGACGCTAC...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGACAGCCGGAACTCTTaGATGCTATCCAGTGCGGAG +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSDSRNS*MLSSAE
Trigger: CTCCGCACTGGATAGCATCCAAGAGTTCCGGCTGTC...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCGCCCTCCTCTCGGTaGAGCAGGACTAGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRAPSSR*SRTSCL
Trigger: TAAGCAGCTAGTCCTGCTCCACCGAGAGGAGGGCGC...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAAGAGCTCATGCAGCTTaGCAGGGCTGCGGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAARAHAA*QGCGAK
Trigger: TTTCGCGCCGCAGCCCTGCCAAGCTGCATGAGCTCT...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAAGAGCTCATGCAGCTTaGCAGGGCTGCGGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGRAHAA*QGCGAK
Trigger: TTTCGCGCCGCAGCCCTGCCAAGCTGCATGAGCTCT...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGCCGGTCCGCGCGCCTaGAGAAAACCTTCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGAGPRA*RKPSRR
Trigger: TCTACGAGAAGGTTTTCTCCAGGCGCGCGGACCGGC...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGCCGGTCCGCGCGCCTaGAGAAAACCTTCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAAGPRA*RKPSRR
Trigger: TCTACGAGAAGGTTTTCTCCAGGCGCGCGGACCGGC...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGAGGGAGCCATCTTTGTaGACTCGCATGGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGREPSL*TRMAEA
Trigger: CGCCTCAGCCATGCGAGTCCACAAAGATGGCTCCCT...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCGACAGCGTCATGCTaGCGCGCACGTACCGCCACA +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPPTASC*RARTAT
Trigger: TGTGGCGGTACGTGCGCGCCAGCATGACGCTGTCGG...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCAGAGACATAGCTCGTaGGGGGCTCAATCCGGGACA +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGQRHSS*GAQSGT
Trigger: TGTCCCGGATTGAGCCCCCCACGAGCTATGTCTCTG...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGGTCAGTCCAGTGTGTaGGCCGCGGGGGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSGQSSV*AAGVTG
Trigger: GCCTGTGACCCCCGCGGCCCACACACTGGACTGACC...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGTCGGAGGACAGATCGTaGGAAAGCGGAGGCTCGCTA +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGSEDRS*ESGGSL
Trigger: TAGCGAGCCTCCGCTTTCCCACGATCTGTCCTCCGA...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545201.6
CDS-3UTR CCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAACCCAACCCAGAGCCTaGGAAGGGTCCTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGTQPRA*EGSLQL
Trigger: CAGCTGCAAGGACCCTTCCCAGGCTCTGGGTTGGGT...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATATCTCCGGGTACTTGGTaGAGACCGCGGAGAATGCTT +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGISPGTW*RPRRML
Trigger: AAGCATTCTCCGCGGTCTTCACCAAGTACCCGGAGA...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGGCTGGATCTCGTGGCTaGAGAGCTCATTGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRAGSRG*RAHWSD
Trigger: GTCTGACCAATGAGCTCTTCAGCCACGAGATCCAGC...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCTGGATCTCGTGGCTaGAGAGCTCATTGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIAGSRG*RAHWSD
Trigger: GTCTGACCAATGAGCTCTTCAGCCACGAGATCCAGC...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCCTCCCTGGCGGGCAATaGTGGTGCCAGCTTTGGCGT +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWALPGGQ*WCQLWR
Trigger: ACGCCAAAGCTGGCACCATCATTGCCCGCCAGGGAG...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR TCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATATACGCAGCCGCCCATTaGGCACGATGTAAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIYAAAH*ARCKCS
Trigger: ACTGCACTTACATCGTGCTCAATGGGCGGCTGCGTA...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTCCTCCACCACGCCGATaGGGTCGCCGCGGCCGTACT +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSPPPRR*GRRGRT
Trigger: AGTACGGCCGCGGCGACCTCATCGGCGTGGTGGAGG...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGTACCGGCGTTTaGTGTGACCCAAGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAAGTGV*CDPRCP
Trigger: AGGGCACCTTGGGTCACATCAAACGCCGGTACCCGC...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGTGCTGGCTGGGTTGGTaGGTTCCGAGTGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPCWLGW*VPSVGA
Trigger: TGCCCCCACACTCGGAACTCACCAACCCAGCCAGCA...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTGCTGCAGCTCCAGCGTaGAGGCCACCATGGGGACCT +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSAAAPA*RPPWGP
Trigger: AGGTCCCCATGGTGGCCTTCACGCTGGAGCTGCAGC...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATACGTACAACGCTCCGATaGAAGAGCCAATGGACGTGC +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIRTTLR*KSQWTC
Trigger: GCACGTCCATTGGCTCTTTCATCGGAGCGTTGTACG...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGTGGACTCGCATGGCTaGGGCGGTGATATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGVDSHG*GGDICG
Trigger: ACCACAGATATCACCGCCTCAGCCATGCGAGTCCAC...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCTGTCCCCGTAGGTGCTaGGGTCCGTCTCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWACPRRC*GPSHPG
Trigger: GCCAGGATGAGACGGACCTCAGCACCTACGGGGACA...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGCAAAGTCCATGGTCTTaGAGCAGTCGATGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRQSPWS*SSRWAG
Trigger: GCCCGCCCATCGACTGCTTCAAGACCATGGACTTTG...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGACAAAGTCCATGGTCTTaGAGCAGTCGATGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGQSPWS*SSRWAG
Trigger: GCCCGCCCATCGACTGCTTCAAGACCATGGACTTTG...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCACAAAGTCCATGGTCTTaGAGCAGTCGATGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAQSPWS*SSRWAG
Trigger: GCCCGCCCATCGACTGCTTCAAGACCATGGACTTTG...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGTGGGAGGGAGGGGGTaGCCCCTGTCGAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWVGGRG*PLSRSS
Trigger: TGAGGACCTCGACAGGGGTCACCCCCTCCCTCCCAC...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGAGAAGAGTCCTGGGATaGTTGGGGTGGCGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRRRVLG*LGWRGL
Trigger: AAGCCCACGCCACCCCAAGCATCCCAGGACTCTTCT...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR GCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCTGCACCACGTAGATaGTGGCATCTGGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPPAPRR*WHLAGP
Trigger: CGGGCCAGCCAGATGCCAGCATCTACGTGGTGCAGG...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGGAAGACCGCGGAGAATaGTTCCACCGGCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPEDRGE*FHRQAQ
Trigger: CTGCGCCTGCCGGTGGAAGCATTCTCCGCGGTCTTC...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCAGGTAGTTGTGCAGTaGCAGGAAGGTGACTCGCTG +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGQVVVQ*QEGDSL
Trigger: CAGCGAGTCACCTTCCTGGCACTGCACAACTACCTG...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGCAGGTAGTTGTGCAGTaGCAGGAAGGTGACTCGCTG +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRQVVVQ*QEGDSL
Trigger: CAGCGAGTCACCTTCCTGGCACTGCACAACTACCTG...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTGAGCGGGGGCCACCCTaGAAGCCTGAGATGTCCCCT +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSERGPP*KPEMSP
Trigger: AGGGGACATCTCAGGCTTGCAGGGTGGCCCCCGCTC...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCACCGGAGGCCTCTTCCTaGAGGGACACGGAGATCCGG +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSPEASS*RDTEIR
Trigger: CCGGATCTCCGTGTCCCTGCAGGAAGAGGCCTCCGG...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCTGCCTCGAAGATGCTaGTGGTCTGGCGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPLPRRC*WSGGPG
Trigger: ACCAGGGCCGCCAGACCAGCAGCATCTTCGAGGCAG...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCTTGCTGCCTCGAAGATaGTGCTGGTCTGGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRLLPRR*CWSGGP
Trigger: AGGGCCGCCAGACCAGCAGCATCTTCGAGGCAGCAA...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCAGCTCCTGCTTTGCTaGCTCGAAGATGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGQLLLC*LEDAAG
Trigger: ACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTG...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGGCCAGCTCCTGCTTTaGTGCCTCGAAGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGGQLLL*CLEDAA
Trigger: AGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCC...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGCCAGCTCCTGCTTTaGTGCCTCGAAGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRGQLLL*CLEDAA
Trigger: AGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCC...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAAGCTTGGCCAGCTCCTaGTTTGCTGCCTCGAAGATG +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGISLASS*FAASKM
Trigger: CATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCT...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGCTTGGCCAGCTCCTaGTTTGCTGCCTCGAAGATG +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRSLASS*FAASKM
Trigger: CATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCT...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGTGCAGCAAGACTCTaGTGTTCAGGAGGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRGAARL*CSGGRG
Trigger: ACCCCTCCCTCCTGAACAGCAGAGTCTTGCTGCACC...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGCCAGCTTTGGCGTGGTaGAGCAAGACTCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRPALAW*SKTLLF
Trigger: GAACAGCAGAGTCTTGCTGCACCACGCCAAAGCTGG...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR GCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGAGCACCGCCAGCTaGCCCACCAGTTCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSVSTAS*PTSSPG
Trigger: GCCCGGGGAACTGGTGGGGCAGCTGGCGGTGCTCAC...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGCACCACACTGGGCTGTaGGCGCATGATCTCATAGAA +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQHHTGL*AHDLIE
Trigger: TTCTATGAGATCATGCGCGCACAGCCCAGTGTGGTG...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCTGGCTGCCACCGTGTaGGCCGCACTCAGCACCACA +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSLAATV*AALSTT
Trigger: TGTGGTGCTGAGTGCGGCGCACACGGTGGCAGCCAG...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCTCCTTCTTGCCACTaGCTCGCTGGATCACGCTAC +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRAPSCH*LAGSRY
Trigger: GTAGCGTGATCCAGCGAGGCAGTGGCAAGAAGGAGC...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGACCACCAGCTCCTTCTTaGCACTGCCTCGCTGGATCA +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGPPAPS*HCLAGS
Trigger: TGATCCAGCGAGGCAGTGGCAAGAAGGAGCTGGTGG...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCTGGGAAGGGTCCTTaGAGCTGCTGCAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIAGKGP*SCCKFP
Trigger: AGGGAATTTGCAGCAGCTGCAAGGACCCTTCCCAGC...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
CDS-3UTR GCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCAGGATTGCCACAGTTaGCAGGTTGCTGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGQDCHS*QVAGWV
Trigger: AACCCAGCCAGCAACCTGGCAACTGTGGCAATCCTG...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAACACACAGGCAGGATTaGCACAGTTGCCAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQATHRQD*HSCQVA
Trigger: AGCAACCTGGCAACTGTGGCAATCCTGCCTGTGTGT...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCACACACAGGCAGGATTaGCACAGTTGCCAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSTHRQD*HSCQVA
Trigger: AGCAACCTGGCAACTGTGGCAATCCTGCCTGTGTGT...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGTCGGACCGATGGCCTaGAGGGCGTGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWVGPMA*RACCSS
Trigger: GGAGCTGCAGCACGCCCTGCAGGCCATCGGTCCGAC...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGGGAGGCCCCCAGGCGTaGCCGGATGATGTCACTGTT +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPGGPQA*PDDVTV
Trigger: AACAGTGACATCATCCGGGCACGCCTGGGGGCCTCC...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCTTGGATGCTATCCAGTaGGGAGGCCCCCAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWALDAIQ*GGPQAC
Trigger: GCACGCCTGGGGGCCTCCGCACTGGATAGCATCCAA...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGTTGGATGCTATCCAGTaGGGAGGCCCCCAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPLDAIQ*GGPQAC
Trigger: GCACGCCTGGGGGCCTCCGCACTGGATAGCATCCAA...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGTGTTCTCCAGCATCTaGTCCAGCTGGCCGAGGGTA +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRVFSSI*SSWPRV
Trigger: TACCCTCGGCCAGCTGGAGCAGATGCTGGAGAACAC...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTCGCGGACAGCGCAGGTaGAGGTGCCCCGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSRGQRR*RCPEHQ
Trigger: CTGGTGCTCGGGGCACCTGCACCTGCGCTGTCCGCG...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTCGGGAGAAGTCGCTGTaGCGGTCCGCGCGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSREKSL*RSARLE
Trigger: CTCCAGGCGCGCGGACCGGCACAGCGACTTCTCCCG...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCTTTAGTACTCCGATGTaGGAGCAGCCCCTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRFSTPM*EQPLAP
Trigger: CGGGGCCAGGGGCTGCTCGCACATCGGAGTACTAAA...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCAAGAGCCAATGGACGTaGCGCCCACCAGGTCCACGG +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAKSQWT*RPPGPR
Trigger: CCGTGGACCTGGTGGGCGGCACGTCCATTGGCTCTT...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGTCGTGCGGCTGGCGCTaGGCTCCTCCGCGTACAACG +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWSCGWR*APPRTT
Trigger: CGTTGTACGCGGAGGAGCGCAGCGCCAGCCGCACGA...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCCACAGGTCCTCAATCTaGTTATCCTGGAAGACCCGA +
Preference number: 4 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGHRSSI*LSWKTR
Trigger: TCGGGTCTTCCAGGATAAGCAGATTGAGGACCTGTG...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGAGCCCGACAGCGTCATaGTGGCGCGCACGTACCGCC +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWSPTAS*WRARTA
Trigger: GGCGGTACGTGCGCGCCAGCATGACGCTGTCGGGCT...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCTTTTGGCACCCATGCTaGGGGCGATGTCCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRFWHPC*GRCPLA
Trigger: TGCCAGCGGACATCGCCCGCAGCATGGGTGCCAAAA...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGGAAGGCAAGCACGTCTaGACGGCGGCTCTCATTAAG +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSREGKHV*TAALIK
Trigger: CTTAATGAGAGCCGCCGTGCAGACGTGCTTGCCTTC...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGCCATCTCGGAGGCAGTaGTGGGGCTTGCGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWPSRRQ*WGLRPR
Trigger: CCGAGGGCGCAAGCCCCAGCACTGCCTCCGAGATGG...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGCAGACAGCGTCGTTaGCGGAGAATCGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAGRQRR*RRIDFS
Trigger: GGAGAAGTCGATTCTCCGGCAACGACGCTGTCTGCC...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGCAGACAGCGTCGTTaGCGGAGAATCGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRGRQRR*RRIDFS
Trigger: GGAGAAGTCGATTCTCCGGCAACGACGCTGTCTGCC...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCCCATCATTCCAGTTTaGAGCGGAGCCTCCATCGGT +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGPIIPV*SGASIG
Trigger: ACCGATGGAGGCTCCGCTGCAAACTGGAATGATGGG...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414982.7
CDS-3UTR GCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGACGAACGGCACTGGCTaGGCACCGCAAATCCGTCCC +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPTNGTG*APQIRP
Trigger: GGGACGGATTTGCGGTGCGCAGCCAGTGCCGTTCGT...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414982.7
ENST00000600737.6
CDS-3UTR GCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCCTGGGAAGGGTCCTTaGAGCTGCTGCAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGPGKGP*SCCKFP
Trigger: AGGGAATTTGCAGCAGCTGCAAGGACCCTTCCCAGG...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCACTCGATGTCCCCATCTaGAGAATGGGCCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAALDVPI*RMGQCC
Trigger: GCAGCACTGGCCCATTCTGCAGATGGGGACATCGAG...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600737.6
CDS-3UTR CCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGTGCGTGGCCGGGAGGTaGCGGAGACAGAGGTATCCA +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPCVAGR*RRQRYP
Trigger: TGGATACCTCTGTCTCCGCCACCTCCCGGCCACGCA...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAACTTCAGAGGGCAGATaGGAGTTAGCCAGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGTSEGR*ELARSP
Trigger: GGGCGACCTGGCTAACTCCCATCTGCCCTCTGAAGT...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCAGTGGCTTCTCGAAGTaGCCCAGCACCCGGACGTTC +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRSGFSK*PSTRTF
Trigger: GAACGTCCGGGTGCTGGGCCACTTCGAGAAGCCACT...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCGCTGGAAGACCATGTaGCGGCAGAGCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRRWKTM*RQSSRK
Trigger: CTTCCTGGAGCTCTGCCGCCACATGGTCTTCCAGCG...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGCCCTGGCCCAGCCGCTaGAAGACCATGTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWPWPSR*KTMWRQ
Trigger: CTGCCGCCACATGGTCTTCCAGCGGCTGGGCCAGGG...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGAACAGACGCAGGGGCTaGATCTCGTGGCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRNRRRG*ISWLKS
Trigger: GCTCTTCAGCCACGAGATCCAGCCCCTGCGTCTGTT...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAAACAGACGCAGGGGCTaGATCTCGTGGCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGNRRRG*ISWLKS
Trigger: GCTCTTCAGCCACGAGATCCAGCCCCTGCGTCTGTT...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTATCGGGTGGCCGCCCTaGGGTCTCCCTGGGCTCGTC +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSIGWPP*GLPGLV
Trigger: GACGAGCCCAGGGAGACCCCAGGGCGGCCACCCGAT...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGCCCGGTGGGATCGGGTaGCCGCCCTGGGGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLPGGIG*PPWGLP
Trigger: AGGGAGACCCCAGGGCGGCCACCCGATCCCACCGGG...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCCCTCGAAGATGCTGCTaGTCTGGCGGCCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAPRRCC*SGGPGR
Trigger: CCTACCAGGGCCGCCAGACCAGCAGCATCTTCGAGG...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCACGTCCTGGTCTCCCTaGCGGGCAATGATGGTGCCA +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRTSWSP*RAMMVP
Trigger: TGGCACCATCATTGCCCGCCAGGGAGACCAGGACGT...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCTGCAGGCTCACGTCCTaGTCTCCCTGGCGGGCAATG +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWACRLTS*SPWRAM
Trigger: CATTGCCCGCCAGGGAGACCAGGACGTGAGCCTGCA...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR CCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAAAGGTGCAGTCGCGTTaGGCTCGCAGTGTGAAGATG +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIKVQSR*ARSVKM
Trigger: CATCTTCACACTGCGAGCCCAACGCGACTGCACCTT...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAATGGCGAAGTCCATCTaGCGCACGAAGGGCGACATC +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAMAKSI*RTKGDI
Trigger: GATGTCGCCCTTCGTGCGCCAGATGGACTTCGCCAT...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGATGGCGAAGTCCATCTaGCGCACGAAGGGCGACATC +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRMAKSI*RTKGDI
Trigger: GATGTCGCCCTTCGTGCGCCAGATGGACTTCGCCAT...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGTTGCCACTGCCTCGCTaGATCACGCTACGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPLPLPR*ITLRSR
Trigger: GCGGCTGCGTAGCGTGATCCAGCGAGGCAGTGGCAA...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTTGCCCTCGGGAAGCTTaGCCAGCTCCGTGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSCPREA*PAPCRA
Trigger: TGCGCGACACGGAGCTGGCCAAGCTTCCCGAGGGCA...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCATGCCCTCGGGAAGCTTaGCCAGCTCCGTGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSCPREA*PAPCRA
Trigger: TGCGCGACACGGAGCTGGCCAAGCTTCCCGAGGGCA...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCATGCCAGGTTGCTGGCTaGGTTGGTGAGTTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAACQVAG*VGEFRV
Trigger: CACTCGGAACTCACCAACCCAGCCAGCAACCTGGCA...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGATGCCAGGTTGCTGGCTaGGTTGGTGAGTTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGCQVAG*VGEFRV
Trigger: CACTCGGAACTCACCAACCCAGCCAGCAACCTGGCA...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGTGCCAGGTTGCTGGCTaGGTTGGTGAGTTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRCQVAG*VGEFRV
Trigger: CACTCGGAACTCACCAACCCAGCCAGCAACCTGGCA...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGGACAGCCGGAACTCTTaGATGCTATCCAGTGCGGAG +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRDSRNS*MLSSAE
Trigger: CTCCGCACTGGATAGCATCCAAGAGTTCCGGCTGTC...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTGACAGCCGGAACTCTTaGATGCTATCCAGTGCGGAG +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGDSRNS*MLSSAE
Trigger: CTCCGCACTGGATAGCATCCAAGAGTTCCGGCTGTC...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGTGTGCATCCTCCTGCTaGGCCAGCCACCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPCASSC*ASHPDS
Trigger: GCTGTCAGGGTGGCTGGCCCAGCAGGAGGATGCACA...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCAGCATCTGCTCCAGCTaGCCGAGGGTAGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWASICSS*PRVGSW
Trigger: CCAGGAGCCTACCCTCGGCCAGCTGGAGCAGATGCT...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGCTGCTTCGTGCGGCTaGCGCTGCGCTCCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSAASCG*RCAPPR
Trigger: ACGCGGAGGAGCGCAGCGCCAGCCGCACGAAGCAGC...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCGAAGTCATGCTCTTaGCCCACTCCCGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSPKSCS*PTPGPA
Trigger: AGCGGGCCCGGGAGTGGGCCAAGAGCATGACTTCGG...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCTCCTGGAAGACCCGATaGATGCTGCGGTTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSSWKTR*MLRLKA
Trigger: TGCCTTTAACCGCAGCATCCATCGGGTCTTCCAGGA...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGAGGGAGCCATCTTTGTaGACTCGCATGGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRREPSL*TRMAEA
Trigger: CGCCTCAGCCATGCGAGTCCACAAAGATGGCTCCCT...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCGACAGCGTCATGCTaGCGCGCACGTACCGCCACA +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSPTASC*RARTAT
Trigger: TGTGGCGGTACGTGCGCGCCAGCATGACGCTGTCGG...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAAGTGAAGCCAGAGCTTaGGAAGGCAAGCACGTCTGC +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGISEARA*EGKHVC
Trigger: GCAGACGTGCTTGCCTTCCCAAGCTCTGGCTTCACT...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCACAGAGACATAGCTCGTaGGGGGCTCAATCCGGGACA +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAQRHSS*GAQSGT
Trigger: TGTCCCGGATTGAGCCCCCCACGAGCTATGTCTCTG...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGCAGAGACATAGCTCGTaGGGGGCTCAATCCGGGACA +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRQRHSS*GAQSGT
Trigger: TGTCCCGGATTGAGCCCCCCACGAGCTATGTCTCTG...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCTCAGGCATCTGTaGCTGAGCCGGGCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSVLRHL*LSRAAP
Trigger: AGGAGCCGCCCGGCTCAGCCACAGATGCCTGAGGAC...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGAAGAGGCGAGTTTATTaGGGGAGGGGCTGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQKRRVY*GRGWSS
Trigger: ACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTT...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGAGGGACGAACGGCACTaGCTGCGCACCGCAAATCCG +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPRDERH*LRTANP
Trigger: CGGATTTGCGGTGCGCAGCCAGTGCCGTTCGTCCCT...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414982.7
ENST00000600737.6
CDS-3UTR CCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATATGGTGGCGCCATTGTTaGAAAATTCCTGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIWWRHC*KIPGWP
Trigger: CGGCCACCCAGGAATTTTCCAACAATGGCGCCACCA...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545201.6
CDS-3UTR TCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCACCCGGACGTTCTTaGGCATATAAAGCACTTCAG +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQAPGRS*AYKALQ
Trigger: CTGAAGTGCTTTATATGCTCAAGAACGTCCGGGTGC...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGTCTCCGGGTACTTGGTaGAGACCGCGGAGAATGCTT +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRSPGTW*RPRRML
Trigger: AAGCATTCTCCGCGGTCTTCACCAAGTACCCGGAGA...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGCTCGTCTGTAGCTaGGGTGCTGACCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRGLVCS*GADHSL
Trigger: AAGAGAATGGTCAGCACCTCAGCTACAGACGAGCCC...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGGCTCGTCTGTAGCTaGGGTGCTGACCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAGLVCS*GADHSL
Trigger: AAGAGAATGGTCAGCACCTCAGCTACAGACGAGCCC...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGACGTACAACGCTCCGATaGAAGAGCCAATGGACGTGC +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGRTTLR*KSQWTC
Trigger: GCACGTCCATTGGCTCTTTCATCGGAGCGTTGTACG...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCTATCTGTGGTCACGTTaGAGTAAGGCAGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSYLWSR*SKAATG
Trigger: ACCTGTGGCTGCCTTACTTCAACGTGACCACAGATA...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGTGGACTCGCATGGCTaGGGCGGTGATATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRVDSHG*GGDICG
Trigger: ACCACAGATATCACCGCCTCAGCCATGCGAGTCCAC...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTTGTCCCCGTAGGTGCTaGGGTCCGTCTCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSCPRRC*GPSHPG
Trigger: GCCAGGATGAGACGGACCTCAGCACCTACGGGGACA...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCAAAGTCCATGGTCTTaGAGCAGTCGATGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRQSPWS*SSRWAG
Trigger: GCCCGCCCATCGACTGCTTCAAGACCATGGACTTTG...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATACTCTGTCAGACAATCTaGCTCCTCTCCGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGILCQTI*LLSVST
Trigger: TGTGCTGACGGAGAGGAGTCAGATTGTCTGACAGAG...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGTCAGGCATCTGTGGCTaGGCCGGGCGGCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLSGICG*AGRLLG
Trigger: CCCCAGGAGCCGCCCGGCTCAGCCACAGATGCCTGA...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAATCACGCCAAGCACCTaGGGGACGAACGGCACTGGC +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSITPST*GTNGTG
Trigger: GCCAGTGCCGTTCGTCCCTCAGGTGCTTGGCGTGAT...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000414982.7
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGCGCTGCTGGTTTTTaGCGGGGATTTACTATCACG +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGGAAGF*RGFTIT
Trigger: CGTGATAGTAAATCCCCGGCAAAAACCAGCAGCGCC...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR GCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAAGCACCATTCCAGTTTaGAGCGGAGCCTCCATCGGT +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAASTIPV*SGASIG
Trigger: ACCGATGGAGGCTCCGCTGCAAACTGGAATGGTGCT...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221249.10
ENST00000450331.7
ENST00000545201.6
CDS-3UTR GCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGCGTCTCTTTCTGGATaGGCAGGATCTTCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSASLSG*AGSSWQ
Trigger: TTGCCAAGAAGATCCTGCGCATCCAGAAAGAGACGC...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGACAGGTAGTTGTGCAGTaGCAGGAAGGTGACTCGCTG +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGQVVVQ*QEGDSL
Trigger: CAGCGAGTCACCTTCCTGGCACTGCACAACTACCTG...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGAGCGGGGGCCACCCTaGAAGCCTGAGATGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWERGPP*KPEMSP
Trigger: AGGGGACATCTCAGGCTTGCAGGGTGGCCCCCGCTC...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGCCGGAGGCCTCTTCCTaGAGGGACACGGAGATCCGG +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWPEASS*RDTEIR
Trigger: CCGGATCTCCGTGTCCCTGCAGGAAGAGGCCTCCGG...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCACTGCCTCGAAGATGCTaGTGGTCTGGCGGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSLPRRC*WSGGPG
Trigger: ACCAGGGCCGCCAGACCAGCAGCATCTTCGAGGCAG...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGTTGCTGCCTCGAAGATaGTGCTGGTCTGGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPLLPRR*CWSGGP
Trigger: AGGGCCGCCAGACCAGCAGCATCTTCGAGGCAGCAA...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGCAGCTCCTGCTTTGCTaGCTCGAAGATGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRQLLLC*LEDAAG
Trigger: ACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTG...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCAGATCCGCAGGAAGGTaGAGTCGCGTTGGGCTCGCA +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWARSAGR*SRVGLA
Trigger: TGCGAGCCCAACGCGACTGCACCTTCCTGCGGATCT...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGCTGGCTGCCACCGTGTaGGCCGCACTCAGCACCACA +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWLAATV*AALSTT
Trigger: TGTGGTGCTGAGTGCGGCGCACACGGTGGCAGCCAG...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTCGGCTGCCGGGTCAGTaGCTCCACCACGCCGATGAG +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSRLPGQ*LHHADE
Trigger: CTCATCGGCGTGGTGGAGGCACTGACCCGGCAGCCG...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTAGGCGGGTCACGACCTaGGGGTACCGGCGTTTGATG +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSRRVTT*GYRRLM
Trigger: CATCAAACGCCGGTACCCGCAGGTCGTGACCCGCCT...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCTGGGAAGGGTCCTTaGAGCTGCTGCAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRAGKGP*SCCKFP
Trigger: AGGGAATTTGCAGCAGCTGCAAGGACCCTTCCCAGC...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
CDS-3UTR GCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGACAGGATTGCCACAGTTaGCAGGTTGCTGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGQDCHS*QVAGWV
Trigger: AACCCAGCCAGCAACCTGGCAACTGTGGCAATCCTG...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTGGAGGCCCCCAGGCGTaGCCGGATGATGTCACTGTT +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSGGPQA*PDDVTV
Trigger: AACAGTGACATCATCCGGGCACGCCTGGGGGCCTCC...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCATTGGATGCTATCCAGTaGGGAGGCCCCCAGGCGTGC +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSLDAIQ*GGPQAC
Trigger: GCACGCCTGGGGGCCTCCGCACTGGATAGCATCCAA...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGCGGTGTGCATCCTCCTaGTGGGCCAGCCACCCTGAC +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWRCASS*WASHPD
Trigger: GTCAGGGTGGCTGGCCCAGCAGGAGGATGCACACCG...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCTGGAGCAGGACTAGCTaGTTAAGGGCGCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAWSRTS*LRARTA
Trigger: GGCTGTGCGCGCCCTTAAGCAGCTAGTCCTGCTCCA...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGCGCGGACAGCGCAGGTaGAGGTGCCCCGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLRGQRR*RCPEHQ
Trigger: CTGGTGCTCGGGGCACCTGCACCTGCGCTGTCCGCG...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGCACAGGTCCTCAATCTaGTTATCCTGGAAGACCCGA +
Preference number: 4 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQHRSSI*LSWKTR
Trigger: TCGGGTCTTCCAGGATAAGCAGATTGAGGACCTGTG...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCACCGTTTTGGCACCCATaGTGCGGGCGATGTCCGCTG +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSPFWHP*CGRCPL
Trigger: CAGCGGACATCGCCCGCAGCATGGGTGCCAAAACGG...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCCGGGACACAATCTCTaGCAAGTCAGTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGPGHNL*QVSEAR
Trigger: TCTGGCTTCACTGACTTGGCAGAGATTGTGTCCCGG...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCCGGGACACAATCTCTaGCAAGTCAGTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGPGHNL*QVSEAR
Trigger: TCTGGCTTCACTGACTTGGCAGAGATTGTGTCCCGG...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGCCGGGACACAATCTCTaGCAAGTCAGTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRPGHNL*QVSEAR
Trigger: TCTGGCTTCACTGACTTGGCAGAGATTGTGTCCCGG...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGTGGTCAAGTCATCAGTaGAACACTGCATCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGWSSHQ*NTASPL
Trigger: GAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTTGGTCAAGTCATCAGTaGAACACTGCATCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGWSSHQ*NTASPL
Trigger: GAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGTGGTCAAGTCATCAGTaGAACACTGCATCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRWSSHQ*NTASPL
Trigger: GAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGTTATGGGGGCTCTATaGCACAGAGCATCACTGGGA +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGVMGAL*HRASLG
Trigger: TCCCAGTGATGCTCTGTGCCATAGAGCCCCCATAAC...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCTTGCAAGGCGCTGCTaGTTTTTGCCGGGGATTTAC +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGLARRC*FLPGIY
Trigger: GTAAATCCCCGGCAAAAACCAGCAGCGCCTTGCAAG...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCCACGAGGGAGGAGGTaGATTGTGACACCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRPRGRR*IVTPSA
Trigger: TGCGGAAGGTGTCACAATCCACCTCCTCCCTCGTGG...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCCCTTCCGCTGCAGCGTaGGCGTCTCTTTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAPSAAA*ASLSGC
Trigger: GCATCCAGAAAGAGACGCCCACGCTGCAGCGGAAGG...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTAGATGCTGGCATCTaGCTGGCCCGGCCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSVDAGI*LARPED
Trigger: GTCTTCCGGCCGGGCCAGCCAGATGCCAGCATCTAC...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCACCACGTAGATGCTaGCATCTGGCTGGCCCGGCC +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWAPRRC*HLAGPA
Trigger: GGCCGGGCCAGCCAGATGCCAGCATCTACGTGGTGC...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTTTGGGAGGCCGGGGCTaGGGAACAGACGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSLGGRG*GTDAGA
Trigger: AGCCCCTGCGTCTGTTCCCCAGCCCCGGCCTCCCAA...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGGGTTTCCAGGGATGTaGGCTTCACAGGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAGFPGM*ASQGPL
Trigger: CAGGGGACCCTGTGAAGCCCACATCCCTGGAAACCC...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGAGATGTCCCCTGGCATaGAGACGCAGCGGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPRCPLA*RRSGSA
Trigger: TGCTGAGCCGCTGCGTCTCCATGCCAGGGGACATCT...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGCACGAGGCTCCTGAGTaGGGGTCCGAGCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLHEAPE*GSERGL
Trigger: CAGCCCCCGCTCGGACCCCCACTCAGGAGCCTCGTG...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCACGTCCTGGTCTCCCTaGCGGGCAATGATGGTGCCA +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWATSWSP*RAMMVP
Trigger: TGGCACCATCATTGCCCGCCAGGGAGACCAGGACGT...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR CCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAAAGGTGCAGTCGCGTTaGGCTCGCAGTGTGAAGATG +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAKVQSR*ARSVKM
Trigger: CATCTTCACACTGCGAGCCCAACGCGACTGCACCTT...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCATAGAAGTCGGACTTaGAGATCCGCAGGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGHRSRT*RSAGRC
Trigger: GCACCTTCCTGCGGATCTCCAAGTCCGACTTCTATG...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGCATAGAAGTCGGACTTaGAGATCCGCAGGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRHRSRT*RSAGRC
Trigger: GCACCTTCCTGCGGATCTCCAAGTCCGACTTCTATG...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCATTGCCACTGCCTCGCTaGATCACGCTACGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSLPLPR*ITLRSR
Trigger: GCGGCTGCGTAGCGTGATCCAGCGAGGCAGTGGCAA...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCAACCCAGAGCCTGCTaGGAAGGGTCCTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPQPRAC*EGSLQL
Trigger: CAGCTGCAAGGACCCTTCCCAGCAGGCTCTGGGTTG...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
CDS-3UTR CCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCATGTGCATCCTCCTGCTaGGCCAGCCACCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSCASSC*ASHPDS
Trigger: GCTGTCAGGGTGGCTGGCCCAGCAGGAGGATGCACA...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGAGAGCTCATGCAGCTTaGCAGGGCTGCGGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPRAHAA*QGCGAK
Trigger: TTTCGCGCCGCAGCCCTGCCAAGCTGCATGAGCTCT...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATATCCTGGAAGACCCGATaGATGCTGCGGTTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGISWKTR*MLRLKA
Trigger: TGCCTTTAACCGCAGCATCCATCGGGTCTTCCAGGA...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGTCCTGGAAGACCCGATaGATGCTGCGGTTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGSWKTR*MLRLKA
Trigger: TGCCTTTAACCGCAGCATCCATCGGGTCTTCCAGGA...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGTCTCGGAGGCAGTGCTaGGGCTTGCGCCCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLSRRQC*GLRPRG
Trigger: CCCCCGAGGGCGCAAGCCCCAGCACTGCCTCCGAGA...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGGTCAGTCCAGTGTGTaGGCCGCGGGGGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSGQSSV*AAGVTG
Trigger: GCCTGTGACCCCCGCGGCCCACACACTGGACTGACC...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAAAGAGGCGAGTTTATTaGGGGAGGGGCTGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIKRRVY*GRGWSS
Trigger: ACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTT...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCTTGTTGGAAAATTCCTaGGTGGCCGGTCCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSLLENS*VAGPLP
Trigger: TGGAAGAGGACCGGCCACCCAGGAATTTTCCAACAA...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545201.6
CDS-3UTR TCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGCACCCGGACGTTCTTaGGCATATAAAGCACTTCAG +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGAPGRS*AYKALQ
Trigger: CTGAAGTGCTTTATATGCTCAAGAACGTCCGGGTGC...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGCTGGATCTCGTGGCTaGAGAGCTCATTGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRAGSRG*RAHWSD
Trigger: GTCTGACCAATGAGCTCTTCAGCCACGAGATCCAGC...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCTACGCAGCCGCCCATTaGGCACGATGTAAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRYAAAH*ARCKCS
Trigger: ACTGCACTTACATCGTGCTCAATGGGCGGCTGCGTA...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGTATCTGTGGTCACGTTaGAGTAAGGCAGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGYLWSR*SKAATG
Trigger: ACCTGTGGCTGCCTTACTTCAACGTGACCACAGATA...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGTATCTGTGGTCACGTTaGAGTAAGGCAGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRYLWSR*SKAATG
Trigger: ACCTGTGGCTGCCTTACTTCAACGTGACCACAGATA...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCAAAGTCCATGGTCTTaGAGCAGTCGATGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPQSPWS*SSRWAG
Trigger: GCCCGCCCATCGACTGCTTCAAGACCATGGACTTTG...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGCTCTGTCAGACAATCTaGCTCCTCTCCGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRLCQTI*LLSVST
Trigger: TGTGCTGACGGAGAGGAGTCAGATTGTCTGACAGAG...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGCGCTGCTGGTTTTTaGCGGGGATTTACTATCACG +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRGAAGF*RGFTIT
Trigger: CGTGATAGTAAATCCCCGGCAAAAACCAGCAGCGCC...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR GCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCATCAGTTTCTTCCTCATaGGTGGCCGGGAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSSVSSS*VAGRWR
Trigger: CCGCCACCTCCCGGCCACGCATGAGGAAGAAACTGA...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGTCTCTTTCTGGATaGGCAGGATCTTCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIASLSG*AGSSWQ
Trigger: TTGCCAAGAAGATCCTGCGCATCCAGAAAGAGACGC...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGAAGACCGCGGAGAATaGTTCCACCGGCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWEDRGE*FHRQAQ
Trigger: CTGCGCCTGCCGGTGGAAGCATTCTCCGCGGTCTTC...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTCCGGAGGCCTCTTCCTaGAGGGACACGGAGATCCGG +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSPEASS*RDTEIR
Trigger: CCGGATCTCCGTGTCCCTGCAGGAAGAGGCCTCCGG...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCAGCTCCTGCTTTGCTaGCTCGAAGATGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRQLLLC*LEDAAG
Trigger: ACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTG...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCACCCCAGAGCACGAAGTaGAGGCTCACGTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSPQSTK*RLTSWS
Trigger: AGACCAGGACGTGAGCCTGCACTTCGTGCTCTGGGG...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR GCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCACCGCCTTGTCGATCATaGGCTGGTACACGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSPPCRS*AGTRAG
Trigger: GCCTGCACGTGTACCAGCGCATGATCGACAAGGCGG...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCGCCTTGTCGATCATaGGCTGGTACACGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSPPCRS*AGTRAG
Trigger: GCCTGCACGTGTACCAGCGCATGATCGACAAGGCGG...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGACCAGTTCCCCGGGCTaGGCTACGAACAGGCACACG +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWTSSPG*ATNRHT
Trigger: CGTGTGCCTGTTCGTAGCGCAGCCCGGGGAACTGGT...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCACACCACACTGGGCTGTaGGCGCATGATCTCATAGAA +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAHHTGL*AHDLIE
Trigger: TTCTATGAGATCATGCGCGCACAGCCCAGTGTGGTG...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGGGGCGACATCCTGGCTaGCACCGTGTGCGCCGCACT +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLGRHPG*HRVRRT
Trigger: AGTGCGGCGCACACGGTGGCAGCCAGGATGTCGCCC...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCGTCCCGCCTCCACTaGAGTCCAGTCGATGGCGAA +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWASRLH*SPVDGE
Trigger: TTCGCCATCGACTGGACTGCAGTGGAGGCGGGACGC...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCTCCTTCTTGCCACTaGCTCGCTGGATCACGCTAC +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAAPSCH*LAGSRY
Trigger: GTAGCGTGATCCAGCGAGGCAGTGGCAAGAAGGAGC...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCCCACCAGCTCCTTCTTaGCACTGCCTCGCTGGATCA +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAPPAPS*HCLAGS
Trigger: TGATCCAGCGAGGCAGTGGCAAGAAGGAGCTGGTGG...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAACACACAGGCAGGATTaGCACAGTTGCCAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAATHRQD*HSCQVA
Trigger: AGCAACCTGGCAACTGTGGCAATCCTGCCTGTGTGT...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAACACACAGGCAGGATTaGCACAGTTGCCAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGTHRQD*HSCQVA
Trigger: AGCAACCTGGCAACTGTGGCAATCCTGCCTGTGTGT...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTCGGTGTGCATCCTCCTaGTGGGCCAGCCACCCTGAC +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSRCASS*WASHPD
Trigger: GTCAGGGTGGCTGGCCCAGCAGGAGGATGCACACCG...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGAGTACGATACGGTGTaGATCCTCCTGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAEYDTV*ILLLGQ
Trigger: CTGGCCCAGCAGGAGGATGCACACCGTATCGTACTC...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGGTGTTCTCCAGCATCTaGTCCAGCTGGCCGAGGGTA +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPVFSSI*SSWPRV
Trigger: TACCCTCGGCCAGCTGGAGCAGATGCTGGAGAACAC...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTTGGAGCAGGACTAGCTaGTTAAGGGCGCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSWSRTS*LRARTA
Trigger: GGCTGTGCGCGCCCTTAAGCAGCTAGTCCTGCTCCA...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGCACAGGTCCTCAATCTaGTTATCCTGGAAGACCCGA +
Preference number: 4 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRHRSSI*LSWKTR
Trigger: TCGGGTCTTCCAGGATAAGCAGATTGAGGACCTGTG...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTTTTTGGCACCCATGCTaGGGGCGATGTCCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSFWHPC*GRCPLA
Trigger: TGCCAGCGGACATCGCCCGCAGCATGGGTGCCAAAA...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGCCATCTCGGAGGCAGTaGTGGGGCTTGCGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLPSRRQ*WGLRPR
Trigger: CCGAGGGCGCAAGCCCCAGCACTGCCTCCGAGATGG...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGATGGTCAAGTCATCAGTaGAACACTGCATCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGWSSHQ*NTASPL
Trigger: GAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGTGCAGAATGGGCCAGTaGTGCTCCCTCCCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLCRMGQ*CSLPGG
Trigger: GCCCCCGGGGAGGGAGCAGCACTGGCCCATTCTGCA...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000600737.6
CDS-3UTR CCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGGCACAGAGCATCACTaGGACTCCGGGACCGATGGT +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSGTEHH*DSGTDG
Trigger: ACCATCGGTCCCGGAGTCCCAGTGATGCTCTGTGCC...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCCCACGAGGGAGGAGGTaGATTGTGACACCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAPRGRR*IVTPSA
Trigger: TGCGGAAGGTGTCACAATCCACCTCCTCCCTCGTGG...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCACGAGGGAGGAGGTaGATTGTGACACCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPPRGRR*IVTPSA
Trigger: TGCGGAAGGTGTCACAATCCACCTCCTCCCTCGTGG...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCATTTCTTCCTCATGCGTaGCCGGGAGGTGGCGGAGAC +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSFLPHA*PGGGGD
Trigger: GTCTCCGCCACCTCCCGGCCACGCATGAGGAAGAAA...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGTGGGCGTCTCTTTCTaGATGCGCAGGATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGVGVSF*MRRIFL
Trigger: CAAGAAGATCCTGCGCATCCAGAAAGAGACGCCCAC...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCGCTGGAAGACCATGTaGCGGCAGAGCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSRWKTM*RQSSRK
Trigger: CTTCCTGGAGCTCTGCCGCCACATGGTCTTCCAGCG...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGAACAGACGCAGGGGCTaGATCTCGTGGCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPNRRRG*ISWLKS
Trigger: GCTCTTCAGCCACGAGATCCAGCCCCTGCGTCTGTT...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGTTGGGAGGCCGGGGCTaGGGAACAGACGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLLGGRG*GTDAGA
Trigger: AGCCCCTGCGTCTGTTCCCCAGCCCCGGCCTCCCAA...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCAAGGGCAGCCACCAGTaGCCGACTCATCCTCACAGT +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAKGSHQ*PTHPHS
Trigger: ACTGTGAGGATGAGTCGGCCACTGGTGGCTGCCCTT...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGTGCAGGCTCACGTCCTaGTCTCCCTGGCGGGCAATG +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWCRLTS*SPWRAM
Trigger: CATTGCCCGCCAGGGAGACCAGGACGTGAGCCTGCA...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCATGGCGAAGTCCATCTaGCGCACGAAGGGCGACATC +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAMAKSI*RTKGDI
Trigger: GATGTCGCCCTTCGTGCGCCAGATGGACTTCGCCAT...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGAGCATCTGCTCCAGCTaGCCGAGGGTAGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWSICSS*PRVGSW
Trigger: CCAGGAGCCTACCCTCGGCCAGCTGGAGCAGATGCT...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTGCGCCCTCCTCTCGGTaGAGCAGGACTAGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSAPSSR*SRTSCL
Trigger: TAAGCAGCTAGTCCTGCTCCACCGAGAGGAGGGCGC...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGCCGGTCCGCGCGCCTaGAGAAAACCTTCTCGTAGA +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSAGPRA*RKPSRR
Trigger: TCTACGAGAAGGTTTTCTCCAGGCGCGCGGACCGGC...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTCCGAAGTCATGCTCTTaGCCCACTCCCGGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSPKSCS*PTPGPA
Trigger: AGCGGGCCCGGGAGTGGGCCAAGAGCATGACTTCGG...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGAACATGGAGGTGACTaGGTACGTGAGGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAEHGGD*VREVQH
Trigger: GTGTTGGACCTCACGTACCCAGTCACCTCCATGTTC...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCTCAATCTGCTTATCCTaGAAGACCCGATGGATGCTG +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSSICLS*KTRWML
Trigger: CAGCATCCATCGGGTCTTCCAGGATAAGCAGATTGA...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGAGGGAGCCATCTTTGTaGACTCGCATGGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPREPSL*TRMAEA
Trigger: CGCCTCAGCCATGCGAGTCCACAAAGATGGCTCCCT...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGGCGGGCGATGTCCGCTaGCAGATTGTTGATGTAGCC +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPAGDVR*QIVDVA
Trigger: GGCTACATCAACAATCTGCCAGCGGACATCGCCCGC...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGAAGAGGCGAGTTTATTaGGGGAGGGGCTGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRKRRVY*GRGWSS
Trigger: ACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTT...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTACCCAACCCAGAGCCTaGGAAGGGTCCTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSTQPRA*EGSLQL
Trigger: CAGCTGCAAGGACCCTTCCCAGGCTCTGGGTTGGGT...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTTCCCCATCTGCAGAATaGGCCAGTGCTGCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSSPSAE*ASAAPS
Trigger: GGAGGGAGCAGCACTGGCCCATTCTGCAGATGGGGA...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600737.6
CDS-3UTR TCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTCTCCCTGGCGGGCAATaGTGGTGCCAGCTTTGGCGT +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSLPGGQ*WCQLWR
Trigger: ACGCCAAAGCTGGCACCATCATTGCCCGCCAGGGAG...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR TCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGTACGCAGCCGCCCATTaGGCACGATGTAAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPYAAAH*ARCKCS
Trigger: ACTGCACTTACATCGTGCTCAATGGGCGGCTGCGTA...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCTACGCAGCCGCCCATTaGGCACGATGTAAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAYAAAH*ARCKCS
Trigger: ACTGCACTTACATCGTGCTCAATGGGCGGCTGCGTA...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTTGCTGGCTGGGTTGGTaGGTTCCGAGTGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSCWLGW*VPSVGA
Trigger: TGCCCCCACACTCGGAACTCACCAACCCAGCCAGCA...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGGCTGCAGCTCCAGCGTaGAGGCCACCATGGGGACCT +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLAAAPA*RPPWGP
Trigger: AGGTCCCCATGGTGGCCTTCACGCTGGAGCTGCAGC...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGATATCTGTGGTCACGTTaGAGTAAGGCAGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGYLWSR*SKAATG
Trigger: ACCTGTGGCTGCCTTACTTCAACGTGACCACAGATA...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTGGACTCGCATGGCTaGGGCGGTGATATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSVDSHG*GGDICG
Trigger: ACCACAGATATCACCGCCTCAGCCATGCGAGTCCAC...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGAGTAGGAGCTGGACTTaGCAACCTCTAGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPSRSWT*QPLAAA
Trigger: TGCGGCAGCTAGAGGTTGTCAAGTCCAGCTCCTACT...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCAGTAGGAGCTGGACTTaGCAACCTCTAGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWASRSWT*QPLAAA
Trigger: TGCGGCAGCTAGAGGTTGTCAAGTCCAGCTCCTACT...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGTTCGTAGCCAGCCCGTaGCTCGATGTCCCCATCATT +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPFVASP*LDVPII
Trigger: AATGATGGGGACATCGAGTCACGGGCTGGCTACGAA...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414982.7
CDS-3UTR GCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGCGCTGCTGGTTTTTaGCGGGGATTTACTATCACG +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRGAAGF*RGFTIT
Trigger: CGTGATAGTAAATCCCCGGCAAAAACCAGCAGCGCC...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCAGCACCATTCCAGTTTaGAGCGGAGCCTCCATCGGT +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWASTIPV*SGASIG
Trigger: ACCGATGGAGGCTCCGCTGCAAACTGGAATGGTGCT...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221249.10
ENST00000450331.7
ENST00000545201.6
CDS-3UTR GCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGCGTCTCTTTCTGGATaGGCAGGATCTTCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGASLSG*AGSSWQ
Trigger: TTGCCAAGAAGATCCTGCGCATCCAGAAAGAGACGC...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGCGTCTCTTTCTGGATaGGCAGGATCTTCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAASLSG*AGSSWQ
Trigger: TTGCCAAGAAGATCCTGCGCATCCAGAAAGAGACGC...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTCCTGCACCACGTAGATaGTGGCATCTGGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSPAPRR*WHLAGP
Trigger: CGGGCCAGCCAGATGCCAGCATCTACGTGGTGCAGG...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGGCCAGCTCCTGCTTTaGTGCCTCGAAGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSGQLLL*CLEDAA
Trigger: AGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCC...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCCCAGCTTTGGCGTGGTaGAGCAAGACTCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAPALAW*SKTLLF
Trigger: GAACAGCAGAGTCTTGCTGCACCACGCCAAAGCTGG...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGCCGCCTTGTCGATCATaGGCTGGTACACGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWPPCRS*AGTRAG
Trigger: GCCTGCACGTGTACCAGCGCATGATCGACAAGGCGG...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCACCAGCTCCTTCTTaGCACTGCCTCGCTGGATCA +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSPPAPS*HCLAGS
Trigger: TGATCCAGCGAGGCAGTGGCAAGAAGGAGCTGGTGG...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGCGGTGTGCATCCTCCTaGTGGGCCAGCCACCCTGAC +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLRCASS*WASHPD
Trigger: GTCAGGGTGGCTGGCCCAGCAGGAGGATGCACACCG...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGTGGAGCAGGACTAGCTaGTTAAGGGCGCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWWSRTS*LRARTA
Trigger: GGCTGTGCGCGCCCTTAAGCAGCTAGTCCTGCTCCA...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTTCATCAGTGCAACACTaGATCCCCGCTCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSSSVQH*IPAQGR
Trigger: CCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGA...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCTGGTCAAGTCATCAGTaGAACACTGCATCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRWSSHQ*NTASPL
Trigger: GAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGTTATGGGGGCTCTATaGCACAGAGCATCACTGGGA +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRVMGAL*HRASLG
Trigger: TCCCAGTGATGCTCTGTGCCATAGAGCCCCCATAAC...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTTGCGTGGCCGGGAGGTaGCGGAGACAGAGGTATCCA +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSCVAGR*RRQRYP
Trigger: TGGATACCTCTGTCTCCGCCACCTCCCGGCCACGCA...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGCCTTCCGCTGCAGCGTaGGCGTCTCTTTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWPSAAA*ASLSGC
Trigger: GCATCCAGAAAGAGACGCCCACGCTGCAGCGGAAGG...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAACTTCAGAGGGCAGATaGGAGTTAGCCAGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSTSEGR*ELARSP
Trigger: GGGCGACCTGGCTAACTCCCATCTGCCCTCTGAAGT...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTACTTCAGAGGGCAGATaGGAGTTAGCCAGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSTSEGR*ELARSP
Trigger: GGGCGACCTGGCTAACTCCCATCTGCCCTCTGAAGT...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAAACAGACGCAGGGGCTaGATCTCGTGGCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSNRRRG*ISWLKS
Trigger: GCTCTTCAGCCACGAGATCCAGCCCCTGCGTCTGTT...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTCCTCGAAGATGCTGCTaGTCTGGCGGCCCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSPRRCC*SGGPGR
Trigger: CCTACCAGGGCCGCCAGACCAGCAGCATCTTCGAGG...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCATAGAAGTCGGACTTaGAGATCCGCAGGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRHRSRT*RSAGRC
Trigger: GCACCTTCCTGCGGATCTCCAAGTCCGACTTCTATG...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCTGCAGTCCAGTCGATaGCGAAGTCCATCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSLQSSR*RSPSGA
Trigger: TGCGCCAGATGGACTTCGCCATCGACTGGACTGCAG...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGTGCCCTCGGGAAGCTTaGCCAGCTCCGTGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLCPREA*PAPCRA
Trigger: TGCGCGACACGGAGCTGGCCAAGCTTCCCGAGGGCA...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCGCCCTCCTCTCGGTaGAGCAGGACTAGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWAPSSR*SRTSCL
Trigger: TAAGCAGCTAGTCCTGCTCCACCGAGAGGAGGGCGC...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATATCAATCTGCTTATCCTaGAAGACCCGATGGATGCTG +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGISICLS*KTRWML
Trigger: CAGCATCCATCGGGTCTTCCAGGATAAGCAGATTGA...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTGCGGGCGATGTCCGCTaGCAGATTGTTGATGTAGCC +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSAGDVR*QIVDVA
Trigger: GGCTACATCAACAATCTGCCAGCGGACATCGCCCGC...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGATTTCAGCCATGTCTaGAACCTTTACCTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSDFSHV*NLYLVS
Trigger: GCTGACAAGGTAAAGGTTCCAGACATGGCTGAAATC...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCAAGAGGCGAGTTTATTaGGGGAGGGGCTGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRKRRVY*GRGWSS
Trigger: ACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTT...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCTCCGGGACCGATGGTaGCGCCATTGTTGGAAAATT +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRLRDRW*RHCWKI
Trigger: AATTTTCCAACAATGGCGCCACCATCGGTCCCGGAG...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545201.6
CDS-3UTR TCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGCACCCGGACGTTCTTaGGCATATAAAGCACTTCAG +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRAPGRS*AYKALQ
Trigger: CTGAAGTGCTTTATATGCTCAAGAACGTCCGGGTGC...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTTCTCCGGGTACTTGGTaGAGACCGCGGAGAATGCTT +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSSPGTW*RPRRML
Trigger: AAGCATTCTCCGCGGTCTTCACCAAGTACCCGGAGA...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTGCTGGATCTCGTGGCTaGAGAGCTCATTGGTCAGAC +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSAGSRG*RAHWSD
Trigger: GTCTGACCAATGAGCTCTTCAGCCACGAGATCCAGC...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCACGTACAACGCTCCGATaGAAGAGCCAATGGACGTGC +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSRTTLR*KSQWTC
Trigger: GCACGTCCATTGGCTCTTTCATCGGAGCGTTGTACG...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGTGTCCCCGTAGGTGCTaGGGTCCGTCTCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLCPRRC*GPSHPG
Trigger: GCCAGGATGAGACGGACCTCAGCACCTACGGGGACA...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCCTCTGTCAGACAATCTaGCTCCTCTCCGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWALCQTI*LLSVST
Trigger: TGTGCTGACGGAGAGGAGTCAGATTGTCTGACAGAG...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCTCTGTCAGACAATCTaGCTCCTCTCCGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPLCQTI*LLSVST
Trigger: TGTGCTGACGGAGAGGAGTCAGATTGTCTGACAGAG...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGGGCTTGCAAGGCGCTaGTGGTTTTTGCCGGGGATT +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWGLARR*WFLPGI
Trigger: AATCCCCGGCAAAAACCAGCAGCGCCTTGCAAGCCC...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR GCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTAGCACCATTCCAGTTTaGAGCGGAGCCTCCATCGGT +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSSTIPV*SGASIG
Trigger: ACCGATGGAGGCTCCGCTGCAAACTGGAATGGTGCT...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221249.10
ENST00000450331.7
ENST00000545201.6
CDS-3UTR GCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGGAAGACCGCGGAGAATaGTTCCACCGGCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLEDRGE*FHRQAQ
Trigger: CTGCGCCTGCCGGTGGAAGCATTCTCCGCGGTCTTC...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCACAGCTCCTGCTTTGCTaGCTCGAAGATGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSQLLLC*LEDAAG
Trigger: ACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTG...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTAGCTTGGCCAGCTCCTaGTTTGCTGCCTCGAAGATG +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSSLASS*FAASKM
Trigger: CATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCT...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGCTTTGGCGTGGTaGAGCAAGACTCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSPALAW*SKTLLF
Trigger: GAACAGCAGAGTCTTGCTGCACCACGCCAAAGCTGG...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR GCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTCCCCAGAGCACGAAGTaGAGGCTCACGTCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSPQSTK*RLTSWS
Trigger: AGACCAGGACGTGAGCCTGCACTTCGTGCTCTGGGG...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR GCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTCCGCCTTGTCGATCATaGGCTGGTACACGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSPPCRS*AGTRAG
Trigger: GCCTGCACGTGTACCAGCGCATGATCGACAAGGCGG...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGACCAGTTCCCCGGGCTaGGCTACGAACAGGCACACG +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLTSSPG*ATNRHT
Trigger: CGTGTGCCTGTTCGTAGCGCAGCCCGGGGAACTGGT...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTAGATCCGCAGGAAGGTaGAGTCGCGTTGGGCTCGCA +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSRSAGR*SRVGLA
Trigger: TGCGAGCCCAACGCGACTGCACCTTCCTGCGGATCT...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGCCACCAGCTCCTTCTTaGCACTGCCTCGCTGGATCA +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWPPAPS*HCLAGS
Trigger: TGATCCAGCGAGGCAGTGGCAAGAAGGAGCTGGTGG...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGCCGGAACTCTTGGATaGTATCCAGTGCGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSAGTLG*YPVRRP
Trigger: GGGCCTCCGCACTGGATAGCATCCAAGAGTTCCGGC...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGGCACAGAGCATCACTaGGACTCCGGGACCGATGGT +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSGTEHH*DSGTDG
Trigger: ACCATCGGTCCCGGAGTCCCAGTGATGCTCTGTGCC...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGGTTATGGGGGCTCTATaGCACAGAGCATCACTGGGA +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPVMGAL*HRASLG
Trigger: TCCCAGTGATGCTCTGTGCCATAGAGCCCCCATAAC...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGATGCTTGGGGTGGCGTaGGCTTGCAAGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLMLGVA*ACKALL
Trigger: CAGCAGCGCCTTGCAAGCCCACGCCACCCCAAGCAT...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTTTCAGAAGAGTCCTaGGATGCTTGGGGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSVSEES*DAWGGV
Trigger: CACGCCACCCCAAGCATCCCAGGACTCTTCTGAAAC...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGGTGGGCGTCTCTTTCTaGATGCGCAGGATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPVGVSF*MRRIFL
Trigger: CAAGAAGATCCTGCGCATCCAGAAAGAGACGCCCAC...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGACTTCAGAGGGCAGATaGGAGTTAGCCAGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWTSEGR*ELARSP
Trigger: GGGCGACCTGGCTAACTCCCATCTGCCCTCTGAAGT...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGGTAGATGCTGGCATCTaGCTGGCCCGGCCGGAAGAC +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLVDAGI*LARPED
Trigger: GTCTTCCGGCCGGGCCAGCCAGATGCCAGCATCTAC...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAAGGGGCTGGATCTCGTaGCTGAAGAGCTCATTGGTC +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSRGWIS*LKSSLV
Trigger: GACCAATGAGCTCTTCAGCCACGAGATCCAGCCCCT...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGGGTTTCCAGGGATGTaGGCTTCACAGGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSGFPGM*ASQGPL
Trigger: CAGGGGACCCTGTGAAGCCCACATCCCTGGAAACCC...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTACGTCCTGGTCTCCCTaGCGGGCAATGATGGTGCCA +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSTSWSP*RAMMVP
Trigger: TGGCACCATCATTGCCCGCCAGGGAGACCAGGACGT...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCCATAGAAGTCGGACTTaGAGATCCGCAGGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAHRSRT*RSAGRC
Trigger: GCACCTTCCTGCGGATCTCCAAGTCCGACTTCTATG...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGAACATGGAGGTGACTaGGTACGTGAGGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAEHGGD*VREVQH
Trigger: GTGTTGGACCTCACGTACCCAGTCACCTCCATGTTC...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGGAACATGGAGGTGACTaGGTACGTGAGGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPEHGGD*VREVQH
Trigger: GTGTTGGACCTCACGTACCCAGTCACCTCCATGTTC...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGATCAATCTGCTTATCCTaGAAGACCCGATGGATGCTG +
Preference number: 4 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGSICLS*KTRWML
Trigger: CAGCATCCATCGGGTCTTCCAGGATAAGCAGATTGA...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCGGGCGATGTCCGCTaGCAGATTGTTGATGTAGCC +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWAGDVR*QIVDVA
Trigger: GGCTACATCAACAATCTGCCAGCGGACATCGCCCGC...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGATTTCAGCCATGTCTaGAACCTTTACCTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIDFSHV*NLYLVS
Trigger: GCTGACAAGGTAAAGGTTCCAGACATGGCTGAAATC...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCAAGAGGCGAGTTTATTaGGGGAGGGGCTGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAKRRVY*GRGWSS
Trigger: ACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTT...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGGCACCCGGACGTTCTTaGGCATATAAAGCACTTCAG +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPAPGRS*AYKALQ
Trigger: CTGAAGTGCTTTATATGCTCAAGAACGTCCGGGTGC...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGTCTCCGGGTACTTGGTaGAGACCGCGGAGAATGCTT +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWSPGTW*RPRRML
Trigger: AAGCATTCTCCGCGGTCTTCACCAAGTACCCGGAGA...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGAGTAGGAGCTGGACTTaGCAACCTCTAGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWSRSWT*QPLAAA
Trigger: TGCGGCAGCTAGAGGTTGTCAAGTCCAGCTCCTACT...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCTCTGTCAGACAATCTaGCTCCTCTCCGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSLCQTI*LLSVST
Trigger: TGTGCTGACGGAGAGGAGTCAGATTGTCTGACAGAG...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGGCCAGCTCCTGCTTTaGTGCCTCGAAGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSGQLLL*CLEDAA
Trigger: AGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCC...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCACCACACTGGGCTGTaGGCGCATGATCTCATAGAA +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSHHTGL*AHDLIE
Trigger: TTCTATGAGATCATGCGCGCACAGCCCAGTGTGGTG...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAAAGGGTCCTTGCAGCTaGTGCAAATTCCCTAGAATT +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAKGPCS*CKFPRI
Trigger: AATTCTAGGGAATTTGCAGCAGCTGCAAGGACCCTT...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCTGGGAAGGGTCCTTaGAGCTGCTGCAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWAGKGP*SCCKFP
Trigger: AGGGAATTTGCAGCAGCTGCAAGGACCCTTCCCAGC...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
CDS-3UTR GCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGAGTACGATACGGTGTaGATCCTCCTGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSEYDTV*ILLLGQ
Trigger: CTGGCCCAGCAGGAGGATGCACACCGTATCGTACTC...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGTTTTGGCACCCATGCTaGGGGCGATGTCCGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLFWHPC*GRCPLA
Trigger: TGCCAGCGGACATCGCCCGCAGCATGGGTGCCAAAA...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCATGGTCAAGTCATCAGTaGAACACTGCATCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSWSSHQ*NTASPL
Trigger: GAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGCCTGGGAAGGGTCCTTaGAGCTGCTGCAAATTCCCT +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWPGKGP*SCCKFP
Trigger: AGGGAATTTGCAGCAGCTGCAAGGACCCTTCCCAGG...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCTTGCAAGGCGCTGCTaGTTTTTGCCGGGGATTTAC +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSLARRC*FLPGIY
Trigger: GTAAATCCCCGGCAAAAACCAGCAGCGCCTTGCAAG...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTCCACGAGGGAGGAGGTaGATTGTGACACCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSPRGRR*IVTPSA
Trigger: TGCGGAAGGTGTCACAATCCACCTCCTCCCTCGTGG...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGTTTCTTCCTCATGCGTaGCCGGGAGGTGGCGGAGAC +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLFLPHA*PGGGGD
Trigger: GTCTCCGCCACCTCCCGGCCACGCATGAGGAAGAAA...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTGGGCGTCTCTTTCTaGATGCGCAGGATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSVGVSF*MRRIFL
Trigger: CAAGAAGATCCTGCGCATCCAGAAAGAGACGCCCAC...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTGTGGGCGTCTCTTTCTaGATGCGCAGGATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSVGVSF*MRRIFL
Trigger: CAAGAAGATCCTGCGCATCCAGAAAGAGACGCCCAC...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGCGCTGGAAGACCATGTaGCGGCAGAGCTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLRWKTM*RQSSRK
Trigger: CTTCCTGGAGCTCTGCCGCCACATGGTCTTCCAGCG...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGAGGGGCTGGATCTCGTaGCTGAAGAGCTCATTGGTC +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWRGWIS*LKSSLV
Trigger: GACCAATGAGCTCTTCAGCCACGAGATCCAGCCCCT...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCACATAGAAGTCGGACTTaGAGATCCGCAGGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSHRSRT*RSAGRC
Trigger: GCACCTTCCTGCGGATCTCCAAGTCCGACTTCTATG...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTGAACATGGAGGTGACTaGGTACGTGAGGTCCAACAC +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSEHGGD*VREVQH
Trigger: GTGTTGGACCTCACGTACCCAGTCACCTCCATGTTC...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGAGTGAAGCCAGAGCTTaGGAAGGCAAGCACGTCTGC +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWSEARA*EGKHVC
Trigger: GCAGACGTGCTTGCCTTCCCAAGCTCTGGCTTCACT...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAAAGAGGCGAGTTTATTaGGGGAGGGGCTGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSKRRVY*GRGWSS
Trigger: ACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTT...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGTCTTCTTGGCAATGTTaGGCATCTTCAGTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRSSWQC*ASSVSS
Trigger: GGAAGAAACTGAAGATGCTCAACATTGCCAAGAAGA...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCATCTTCTTGGCAATGTTaGGCATCTTCAGTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAASSWQC*ASSVSS
Trigger: GGAAGAAACTGAAGATGCTCAACATTGCCAAGAAGA...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTGCACCCGGACGTTCTTaGGCATATAAAGCACTTCAG +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSAPGRS*AYKALQ
Trigger: CTGAAGTGCTTTATATGCTCAAGAACGTCCGGGTGC...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTTATCTGTGGTCACGTTaGAGTAAGGCAGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSYLWSR*SKAATG
Trigger: ACCTGTGGCTGCCTTACTTCAACGTGACCACAGATA...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTAGTAGGAGCTGGACTTaGCAACCTCTAGCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSSRSWT*QPLAAA
Trigger: TGCGGCAGCTAGAGGTTGTCAAGTCCAGCTCCTACT...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGGCGCTGCTGGTTTTTaGCGGGGATTTACTATCACG +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWGAAGF*RGFTIT
Trigger: CGTGATAGTAAATCCCCGGCAAAAACCAGCAGCGCC...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR GCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCAAGGGTCCTTGCAGCTaGTGCAAATTCCCTAGAATT +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRKGPCS*CKFPRI
Trigger: AATTCTAGGGAATTTGCAGCAGCTGCAAGGACCCTT...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTCAGGATTGCCACAGTTaGCAGGTTGCTGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSQDCHS*QVAGWV
Trigger: AACCCAGCCAGCAACCTGGCAACTGTGGCAATCCTG...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGACACACAGGCAGGATTaGCACAGTTGCCAGGTTGCT +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWTHRQD*HSCQVA
Trigger: AGCAACCTGGCAACTGTGGCAATCCTGCCTGTGTGT...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGAAGGCAAGCACGTCTaGACGGCGGCTCTCATTAAG +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSEGKHV*TAALIK
Trigger: CTTAATGAGAGCCGCCGTGCAGACGTGCTTGCCTTC...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGCCGGGACACAATCTCTaGCAAGTCAGTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWPGHNL*QVSEAR
Trigger: TCTGGCTTCACTGACTTGGCAGAGATTGTGTCCCGG...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGGTAGTAGTGAAGTTATaGGGGCTCTATGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPVVVKL*GLYGTE
Trigger: CTCTGTGCCATAGAGCCCCCATAACTTCACTACTAC...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGACAGCCGGAACTCTTaGATGCTATCCAGTGCGGAG +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSDSRNS*MLSSAE
Trigger: CTCCGCACTGGATAGCATCCAAGAGTTCCGGCTGTC...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGAGGGAGCCATCTTTGTaGACTCGCATGGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLREPSL*TRMAEA
Trigger: CGCCTCAGCCATGCGAGTCCACAAAGATGGCTCCCT...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGATTTCAGCCATGTCTaGAACCTTTACCTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRDFSHV*NLYLVS
Trigger: GCTGACAAGGTAAAGGTTCCAGACATGGCTGAAATC...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGTCTCCGGGTACTTGGTaGAGACCGCGGAGAATGCTT +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLSPGTW*RPRRML
Trigger: AAGCATTCTCCGCGGTCTTCACCAAGTACCCGGAGA...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGCGTACAACGCTCCGATaGAAGAGCCAATGGACGTGC +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLRTTLR*KSQWTC
Trigger: GCACGTCCATTGGCTCTTTCATCGGAGCGTTGTACG...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGAGCTTGGCCAGCTCCTaGTTTGCTGCCTCGAAGATG +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLSLASS*FAASKM
Trigger: CATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCT...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCAAGGGTCCTTGCAGCTaGTGCAAATTCCCTAGAATT +
Preference number: 4 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAKGPCS*CKFPRI
Trigger: AATTCTAGGGAATTTGCAGCAGCTGCAAGGACCCTT...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGGAAGGCAAGCACGTCTaGACGGCGGCTCTCATTAAG +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLEGKHV*TAALIK
Trigger: CTTAATGAGAGCCGCCGTGCAGACGTGCTTGCCTTC...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTGTAGTAGTGAAGTTATaGGGGCTCTATGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSVVVKL*GLYGTE
Trigger: CTCTGTGCCATAGAGCCCCCATAACTTCACTACTAC...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGGTTTCAGAAGAGTCCTaGGATGCTTGGGGTGGCGTG +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLVSEES*DAWGGV
Trigger: CACGCCACCCCAAGCATCCCAGGACTCTTCTGAAAC...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGGGCGTCTCTTTCTaGATGCGCAGGATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSVGVSF*MRRIFL
Trigger: CAAGAAGATCCTGCGCATCCAGAAAGAGACGCCCAC...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGAGGGGCTGGATCTCGTaGCTGAAGAGCTCATTGGTC +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLRGWIS*LKSSLV
Trigger: GACCAATGAGCTCTTCAGCCACGAGATCCAGCCCCT...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGGACAGCCGGAACTCTTaGATGCTATCCAGTGCGGAG +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLDSRNS*MLSSAE
Trigger: CTCCGCACTGGATAGCATCCAAGAGTTCCGGCTGTC...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR TCA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGTCTTCTTGGCAATGTTaGGCATCTTCAGTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPSSWQC*ASSVSS
Trigger: GGAAGAAACTGAAGATGCTCAACATTGCCAAGAAGA...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGCACCACACTGGGCTGTaGGCGCATGATCTCATAGAA +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLHHTGL*AHDLIE
Trigger: TTCTATGAGATCATGCGCGCACAGCCCAGTGTGGTG...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTAAGGGTCCTTGCAGCTaGTGCAAATTCCCTAGAATT +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSKGPCS*CKFPRI
Trigger: AATTCTAGGGAATTTGCAGCAGCTGCAAGGACCCTT...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTCACAGGTCCTCAATCTaGTTATCCTGGAAGACCCGA +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSHRSSI*LSWKTR
Trigger: TCGGGTCTTCCAGGATAAGCAGATTGAGGACCTGTG...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR GCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGCCGGGACACAATCTCTaGCAAGTCAGTGAAGCCAGA +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLPGHNL*QVSEAR
Trigger: TCTGGCTTCACTGACTTGGCAGAGATTGTGTCCCGG...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGTAGTAGTGAAGTTATaGGGGCTCTATGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWVVVKL*GLYGTE
Trigger: CTCTGTGCCATAGAGCCCCCATAACTTCACTACTAC...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGTCCTGGAAGACCCGATaGATGCTGCGGTTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: PRGEFIGGGAGQVISATLSWKTR*MLRLKA
Trigger: TGCCTTTAACCGCAGCATCCATCGGGTCTTCCAGGA...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGTCAATCTGCTTATCCTaGAAGACCCGATGGATGCTG +
Preference number: 4 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWSICLS*KTRWML
Trigger: CAGCATCCATCGGGTCTTCCAGGATAAGCAGATTGA...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTGATTTCAGCCATGTCTaGAACCTTTACCTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: GAGQVISATLHPRSGQVSDFSHV*NLYLVS
Trigger: GCTGACAAGGTAAAGGTTCCAGACATGGCTGAAATC...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGATTTCAGCCATGTCTaGAACCTTTACCTTGTCAGC +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSDFSHV*NLYLVS
Trigger: GCTGACAAGGTAAAGGTTCCAGACATGGCTGAAATC...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR TCA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCATCTTCTTGGCAATGTTaGGCATCTTCAGTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSSSWQC*ASSVSS
Trigger: GGAAGAAACTGAAGATGCTCAACATTGCCAAGAAGA...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTAGTAGTGAAGTTATaGGGGCTCTATGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSVVVKL*GLYGTE
Trigger: CTCTGTGCCATAGAGCCCCCATAACTTCACTACTAC...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTTCAATCTGCTTATCCTaGAAGACCCGATGGATGCTG +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSSICLS*KTRWML
Trigger: CAGCATCCATCGGGTCTTCCAGGATAAGCAGATTGA...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTAGTGAAGCCAGAGCTTaGGAAGGCAAGCACATAGAT +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSSEARA*EGKHID
Trigger: ATCTATGTGCTTGCCTTCCCAAGCTCTGGCTTCACT...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599947.1
CDS-3UTR GCA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTAAGGGTCCTTGCAGCTaGTGCAAATTCCCTAGAATT +
Preference number: 4 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSKGPCS*CKFPRI
Trigger: AATTCTAGGGAATTTGCAGCAGCTGCAAGGACCCTT...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGTGCCCTCGGGAAGCTaGGCCAGCTCCGTGTCGCGC +
Preference number: 5 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGVPSGS*ASSVSR
Trigger: GCGCGACACGGAGCTGGCCAAGCTTCCCGAGGGCAC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS CCA 90 bp TCCGGCCCCGATCATCACGCCAAGCACCTGAGGGACGAACGGCACTaGCTGCGCACCGCAAATCCGTCCCGCCGAGCCTTCCCCGGGCGC +
Preference number: 5 (lower is better)
Translates to: SGPDHHAKHLRDERH*LRTANPSRRAFPGR
Trigger: GCGCCCGGGGAAGGCTCGGCGGGACGGATTTGCGGTGCGCAGCCAGTGCCGTTCGTCCCTCAGGTGCTTGGCGTGATGATCGGGGCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414982.7
ENST00000600737.6
CDS-3UTR CAA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCACCGAAGTCATGCTCTaGGCCCACTCCCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGTEVML*AHSRAR
Trigger: GCGGGCCCGGGAGTGGGCCAAGAGCATGACTTCGGT...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS GCA 90 bp GACCCGCACCAAGCTCTCCGGGTACTTGGTGAAGACCGCGGAGAATaGTTCCACCGGCAGGCGCAGCACCGTGGAGTCCCGGGCCGCCCG +
Preference number: 5 (lower is better)
Translates to: DPHQALRVLGEDRGE*FHRQAQHRGVPGRP
Trigger: CGGGCGGCCCGGGACTCCACGGTGCTGCGCCTGCCGGTGGAAGCATTCTCCGCGGTCTTCACCAAGTACCCGGAGAGCTTGGTGCGGGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594551.1
ENST00000595264.5
ENST00000600737.6
CDS CCA 90 bp CCGCAAATCCGTCCCGCCGAGCCTTCCCCGGGCGCCAGGACGTCCTaGAACCCATCCCTCTCCGCCACCTTCGCCCCCGAGGAGTTCGTA +
Preference number: 5 (lower is better)
Translates to: PQIRPAEPSPGARTS*NPSLSATFAPEEFV
Trigger: TACGAACTCCTCGGGGGCGAAGGTGGCGGAGAGGGATGGGTTCCAGGACGTCCTGGCGCCCGGGGAAGGCTCGGCGGGACGGATTTGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414982.7
ENST00000600737.6
CDS-3UTR CAA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGCTCCCCGCGCCATGCTaGGAAGGCCGACTGAGGCCG +
Preference number: 5 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGLPAPC*EGRLRP
Trigger: CGGCCTCAGTCGGCCTTCCAAGCATGGCGCGGGGAG...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221249.10
CDS-3UTR CAA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCACCGAAGTCATGCTCTaGGCCCACTCCCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSTEVML*AHSRAR
Trigger: GCGGGCCCGGGAGTGGGCCAAGAGCATGACTTCGGT...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAACCGAAGTCATGCTCTaGGCCCACTCCCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQATEVML*AHSRAR
Trigger: GCGGGCCCGGGAGTGGGCCAAGAGCATGACTTCGGT...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGACCGAAGTCATGCTCTaGGCCCACTCCCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQTEVML*AHSRAR
Trigger: GCGGGCCCGGGAGTGGGCCAAGAGCATGACTTCGGT...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS TCA 90 bp CGACCCTCCCACCCCTCCTCCCCGCGCCATGCTTGGAAGGCCGACTaGGGCCGCCATGCTGAGTGTGGCCGCGCCTTAAAGGGCCTCACA +
Preference number: 5 (lower is better)
Translates to: RPSHPSSPRHAWKAD*GRHAECGRALKGLT
Trigger: TGTGAGGCCCTTTAAGGCGCGGCCACACTCAGCATGGCGGCCTCAGTCGGCCTTCCAAGCATGGCGCGGGGAGGAGGGGTGGGAGGGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221249.10
CDS TCA 90 bp GGGATCGGGTGGCCGCCCTGGGGTCTCCCTGGGCTCGTCTGTAGCTaGGGTGCTGACCATTCTCTTGGAGCCCCGCACAGGGCTGGTGCG +
Preference number: 5 (lower is better)
Translates to: GIGWPPWGLPGLVCS*GADHSLGAPHRAGA
Trigger: CGCACCAGCCCTGTGCGGGGCTCCAAGAGAATGGTCAGCACCTCAGCTACAGACGAGCCCAGGGAGACCCCAGGGCGGCCACCCGATCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000595176.5
ENST00000595264.5
ENST00000599311.5
ENST00000600737.6
CDS TCA 90 bp GTGACCACCACCGCCACTCCGGCCCCGATCATCACGCCAAGCACCTaGGGGACGAACGGCACTGGCTGCGCACCGCAAATCCGTCCCGCC +
Preference number: 5 (lower is better)
Translates to: VTTTATPAPIITPST*GTNGTGCAPQIRPA
Trigger: GGCGGGACGGATTTGCGGTGCGCAGCCAGTGCCGTTCGTCCCTCAGGTGCTTGGCGTGATGATCGGGGCCGGAGTGGCGGTGGTGGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414982.7
ENST00000600737.6
CDS GCA 90 bp GTCGGAGCGGTCGCCCTGCCTGTACAGCGCGCGTCCCGCCTCCACTaGAGTCCAGTCGATGGCGAAGTCCATCTGGCGCACGAAGGGCGA +
Preference number: 5 (lower is better)
Translates to: VGAVALPVQRASRLH*SPVDGEVHLAHEGR
Trigger: TCGCCCTTCGTGCGCCAGATGGACTTCGCCATCGACTGGACTGCAGTGGAGGCGGGACGCGCGCTGTACAGGCAGGGCGACCGCTCCGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594864.1
ENST00000600737.6
CDS GCA 90 bp GCGCAGCCAGGCCTCCCTTGCGCCCTGTGCCCAGCTCCCCTCGGCTaGCCACCTCAATCCGCATCAGCTTGGCCAGCTCCTGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: AQPGLPCALCPAPLG*PPQSASAWPAPALL
Trigger: CAGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTGAGGTGGGCAGCCGAGGGGAGCTGGGCACAGGGCGCAAGGGAGGCCTGGCTGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599311.5
CDS-3UTR CAA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGTGCCCTCGGGAAGCTaGGCCAGCTCCGTGTCGCGC +
Preference number: 5 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGVPSGS*ASSVSR
Trigger: GCGCGACACGGAGCTGGCCAAGCTTCCCGAGGGCAC...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATGGCGATGACCGTTTaGGCACCCATGCTGCGGGCG +
Preference number: 5 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGMAMTV*APMLRA
Trigger: CGCCCGCAGCATGGGTGCCAAAACGGTCATCGCCAT...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS GCA 90 bp GTCGATGGCGAAGTCCATCTGGCGCACGAAGGGCGACATCCTGGCTaGCACCGTGTGCGCCGCACTCAGCACCACACTGGGCTGTGCGCG +
Preference number: 5 (lower is better)
Translates to: VDGEVHLAHEGRHPG*HRVRRTQHHTGLCA
Trigger: CGCGCACAGCCCAGTGTGGTGCTGAGTGCGGCGCACACGGTGGCAGCCAGGATGTCGCCCTTCGTGCGCCAGATGGACTTCGCCATCGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594864.1
ENST00000595176.5
ENST00000600737.6
CDS GCA 90 bp CTGTCTGTGTGTGCCCACGCGTGTGCGTGTGTGTGGTGCGGGAGGTaGTTGCGTGTGCGGGTGGTGCGGGCGGCCACTTGCCTGGCAGAT +
Preference number: 5 (lower is better)
Translates to: LSVCAHACACVWCGR*LRVRVVRAATCLAD
Trigger: ATCTGCCAGGCAAGTGGCCGCCCGCACCACCCGCACACGCAAGCACCTCCCGCACCACACACACGCACACGCGTGGGCACACACAGACAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595352.1
CDS-3UTR CAA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCGGAGCCTCCATCGGTaGATTCCAGCTGGACGGCCG +
Preference number: 5 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGRSLHR*IPAGRP
Trigger: CGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCG...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CAA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCGCCACAGTTGCCAGGTaGCTGGCTGGGTTGGTGAGT +
Preference number: 5 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGATVAR*LAGLVS
Trigger: ACTCACCAACCCAGCCAGCAACCTGGCAACTGTGGC...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCATGGCGATGACCGTTTaGGCACCCATGCTGCGGGCG +
Preference number: 5 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSMAMTV*APMLRA
Trigger: CGCCCGCAGCATGGGTGCCAAAACGGTCATCGCCAT...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS GCA 90 bp ACCAGTGGCCGACTCATCCTCACAGTAGCTGTATTCACAGGCGCCTaGCGGCTGCTCACGAGGCTCCTGAGTGGGGGTCCGAGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: TSGRLILTVAVFTGA*RLLTRLLSGGPSGG
Trigger: GCCCCCGCTCGGACCCCCACTCAGGAGCCTCGTGAGCAGCCGGCAGGCGCCTGTGAATACAGCTACTGTGAGGATGAGTCGGCCACTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000595176.5
ENST00000595889.1
ENST00000599311.5
ENST00000600737.6
CDS GCA 90 bp CTGTGTGTGCCCACGCGTGTGCGTGTGTGTGGTGCGGGAGGTGCTTaGGTGTGCGGGTGGTGCGGGCGGCCACTTGCCTGGCAGATTGTT +
Preference number: 5 (lower is better)
Translates to: LCVPTRVRVCGAGGA*VCGWCGRPLAWQIV
Trigger: AACAATCTGCCAGGCAAGTGGCCGCCCGCACCACCCGCACACGCAAGCACCTCCCGCACCACACACACGCACACGCGTGGGCACACACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595352.1
CDS GCA 90 bp GGCATGTGTCCCGTCATCGAGCCTGTCTGTGTGTGCCCACGCGTGTaGGTGTGTGTGGTGCGGGAGGTGCTTGCGTGTGCGGGTGGTGCG +
Preference number: 5 (lower is better)
Translates to: GMCPVIEPVCVCPRV*VCVVREVLACAGGA
Trigger: CGCACCACCCGCACACGCAAGCACCTCCCGCACCACACACACGCACACGCGTGGGCACACACAGACAGGCTCGATGACGGGACACATGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595352.1
CDS CCA 90 bp CCTGCCTGTACAGCGCGCGTCCCGCCTCCACTGCAGTCCAGTCGATaGCGAAGTCCATCTGGCGCACGAAGGGCGACATCCTGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: PACTARVPPPLQSSR*RSPSGARRATSWLP
Trigger: TGGCAGCCAGGATGTCGCCCTTCGTGCGCCAGATGGACTTCGCCATCGACTGGACTGCAGTGGAGGCGGGACGCGCGCTGTACAGGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594864.1
ENST00000600737.6
CDS CCA 90 bp ACGCGTGTGCGTGTGTGTGGTGCGGGAGGTGCTTGCGTGTGCGGGTaGTGCGGGCGGCCACTTGCCTGGCAGATTGTTGATGTAGCCGCC +
Preference number: 5 (lower is better)
Translates to: TRVRVCGAGGACVCG*CGRPLAWQIVDVAA
Trigger: GGCGGCTACATCAACAATCTGCCAGGCAAGTGGCCGCCCGCACCACCCGCACACGCAAGCACCTCCCGCACCACACACACGCACACGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595352.1
CDS-3UTR CAA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGAGTCCTGGGATGCTaGGGGTGGCGTGGGCTTGCA +
Preference number: 5 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRRVLGC*GWRGLA
Trigger: TGCAAGCCCACGCCACCCCAAGCATCCCAGGACTCT...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CAA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCTGGCCAGCTCCTGCTTaGCTGCCTCGAAGATGCTGC +
Preference number: 5 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSWPAPA*LPRRCC
Trigger: GCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCA...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGTGGCCAGCTCCTGCTTaGCTGCCTCGAAGATGCTGC +
Preference number: 5 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQWPAPA*LPRRCC
Trigger: GCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCA...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCACACACGTCCTCCGCCTaGTCGATCATGCGCTGGTAC +
Preference number: 5 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAHTSSA*SIMRWY
Trigger: GTACCAGCGCATGATCGACAAGGCGGAGGACGTGTG...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGGTGCCCTCGGGAAGCTaGGCCAGCTCCGTGTCGCGC +
Preference number: 5 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPVPSGS*ASSVSR
Trigger: GCGCGACACGGAGCTGGCCAAGCTTCCCGAGGGCAC...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAGCAGGATTGCCACAGTaGCCAGGTTGCTGGCTGGGT +
Preference number: 5 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAAGLPQ*PGCWLG
Trigger: ACCCAGCCAGCAACCTGGCAACTGTGGCAATCCTGC...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGCAGGATTGCCACAGTaGCCAGGTTGCTGGCTGGGT +
Preference number: 5 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSAGLPQ*PGCWLG
Trigger: ACCCAGCCAGCAACCTGGCAACTGTGGCAATCCTGC...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAATGGCGATGACCGTTTaGGCACCCATGCTGCGGGCG +
Preference number: 5 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIMAMTV*APMLRA
Trigger: CGCCCGCAGCATGGGTGCCAAAACGGTCATCGCCAT...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCCCAAAGTCCATGGTCTaGAAGCAGTCGATGGGCGGG +
Preference number: 5 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGPKSMV*KQSMGG
Trigger: CCCGCCCATCGACTGCTTCAAGACCATGGACTTTGG...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CAA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGGGCAGACAGCGTCGTaGCCGGAGAATCGACTTCTC +
Preference number: 5 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSGQTAS*PENRLL
Trigger: GAGAAGTCGATTCTCCGGCAACGACGCTGTCTGCCC...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS TCA 90 bp TCCCTCTCCGCCACCTTCGCCCCCGAGGAGTTCGTAGCCAGCCCGTaGCTCGATGTCCCCATCTGCAGAATGGGCCAGTGCTGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: SLSATFAPEEFVASP*LDVPICRMGQCCSL
Trigger: GAGGGAGCAGCACTGGCCCATTCTGCAGATGGGGACATCGAGTCACGGGCTGGCTACGAACTCCTCGGGGGCGAAGGTGGCGGAGAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600737.6
CDS GCA 90 bp TCCGCATCAGCTTGGCCAGCTCCTGCTTTGCTGCCTCGAAGATGCTaGTGGTCTGGCGGCCCTGGTAGGGCCCGAAAGGGCAGCCACCAG +
Preference number: 5 (lower is better)
Translates to: SASAWPAPALLPRRC*WSGGPGRARKGSHQ
Trigger: CTGGTGGCTGCCCTTTCGGGCCCTACCAGGGCCGCCAGACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCTGATGCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000595176.5
ENST00000595889.1
ENST00000599311.5
ENST00000600737.6
CDS GCA 90 bp GAGGGAGGGGTCCTCAATCCGCATCAGCTTGGCCAGCTCCTGCTTTaGTGCCTCGAAGATGCTGCTGGTCTGGCGGCCCTGGTAGGGCCC +
Preference number: 5 (lower is better)
Translates to: EGGVLNPHQLGQLLL*CLEDAAGLAALVGP
Trigger: GGGCCCTACCAGGGCCGCCAGACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTGAGGACCCCTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000595176.5
ENST00000595889.1
ENST00000600737.6
CDS GCA 90 bp CGTGTGCGTGTGTGTGGTGCGGGAGGTGCTTGCGTGTGCGGGTGGTaGGGGCGGCCACTTGCCTGGCAGATTGTTGATGTAGCCGCCATC +
Preference number: 5 (lower is better)
Translates to: RVRVCGAGGACVCGW*GRPLAWQIVDVAAI
Trigger: GATGGCGGCTACATCAACAATCTGCCAGGCAAGTGGCCGCCCGCACCACCCGCACACGCAAGCACCTCCCGCACCACACACACGCACACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595352.1
CDS GCA 90 bp GTGCCCACGCGTGTGCGTGTGTGTGGTGCGGGAGGTGCTTGCGTGTaGGGGTGGTGCGGGCGGCCACTTGCCTGGCAGATTGTTGATGTA +
Preference number: 5 (lower is better)
Translates to: VPTRVRVCGAGGACV*GWCGRPLAWQIVDV
Trigger: TACATCAACAATCTGCCAGGCAAGTGGCCGCCCGCACCACCCGCACACGCAAGCACCTCCCGCACCACACACACGCACACGCGTGGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595352.1
CDS GCA 90 bp TCGGCTGCCCACCTCAATCCGCATCAGCTTGGCCAGCTCCTGCTTTaGTGCCTCGAAGATGCTGCTGGTCTGGCGGCCCTGGTAGGGCCC +
Preference number: 5 (lower is better)
Translates to: SAAHLNPHQLGQLLL*CLEDAAGLAALVGP
Trigger: GGGCCCTACCAGGGCCGCCAGACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTGAGGTGGGCAGCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599311.5
CDS CCA 90 bp TGCTGGTCTGGCGGCCCTGGTAGGGCCCGAAAGGGCAGCCACCAGTaGCCGACTCATCCTCACAGTAGCTGTATTCACAGGCGCCTGCCG +
Preference number: 5 (lower is better)
Translates to: CWSGGPGRARKGSHQ*PTHPHSSCIHRRLP
Trigger: CGGCAGGCGCCTGTGAATACAGCTACTGTGAGGATGAGTCGGCCACTGGTGGCTGCCCTTTCGGGCCCTACCAGGGCCGCCAGACCAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000595176.5
ENST00000595889.1
ENST00000599311.5
ENST00000600737.6
CDS-3UTR CAA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCGGAGCCTCCATCGGTaGATTCCAGCTGGACGGCCG +
Preference number: 5 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRRSLHR*IPAGRP
Trigger: CGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCG...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CAA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAAGCACCATTCCAGTTaGCAGCGGAGCCTCCATCGG +
Preference number: 5 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSKHHSS*QRSLHR
Trigger: CCGATGGAGGCTCCGCTGCAAACTGGAATGGTGCTT...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221249.10
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CAA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATATGGCCAGCTCCTGCTTaGCTGCCTCGAAGATGCTGC +
Preference number: 5 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIWPAPA*LPRRCC
Trigger: GCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCA...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATGATGGTGCCAGCTTaGGCGTGGTGCAGCAAGACT +
Preference number: 5 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGMMVPA*AWCSKT
Trigger: AGTCTTGCTGCACCACGCCAAAGCTGGCACCATCAT...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR CAA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATACACACGTCCTCCGCCTaGTCGATCATGCGCTGGTAC +
Preference number: 5 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIHTSSA*SIMRWY
Trigger: GTACCAGCGCATGATCGACAAGGCGGAGGACGTGTG...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGCACACGTCCTCCGCCTaGTCGATCATGCGCTGGTAC +
Preference number: 5 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRHTSSA*SIMRWY
Trigger: GTACCAGCGCATGATCGACAAGGCGGAGGACGTGTG...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCGAAGGTGCAGTCGCGTaGGGCTCGCAGTGTGAAGAT +
Preference number: 5 (lower is better)
Translates to: PAQGRSVQCVGRGGHRHSEGAVA*GSQCED
Trigger: ATCTTCACACTGCGAGCCCAACGCGACTGCACCTTC...GCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGTGCTGGGAAGGGTCCTaGCAGCTGCTGCAAATTCCC +
Preference number: 5 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQCWEGS*QLLQIP
Trigger: GGGAATTTGCAGCAGCTGCAAGGACCCTTCCCAGCA...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
CDS-3UTR CAA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCCACAGTTGCCAGGTaGCTGGCTGGGTTGGTGAGT +
Preference number: 5 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIATVAR*LAGLVS
Trigger: ACTCACCAACCCAGCCAGCAACCTGGCAACTGTGGC...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCACACACACAGGCAGGATaGCCACAGTTGCCAGGTTGC +
Preference number: 5 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAHTQAG*PQLPGC
Trigger: GCAACCTGGCAACTGTGGCAATCCTGCCTGTGTGTG...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGACCGAAGTCATGCTCTaGGCCCACTCCCGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPTEVML*AHSRAR
Trigger: GCGGGCCCGGGAGTGGGCCAAGAGCATGACTTCGGT...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGCACAGGGAGCCATCTTaGTGGACTCGCATGGCTGAG +
Preference number: 5 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQHREPS*WTRMAE
Trigger: CTCAGCCATGCGAGTCCACAAAGATGGCTCCCTGTG...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAATGGCGATGACCGTTTaGGCACCCATGCTGCGGGCG +
Preference number: 5 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGMAMTV*APMLRA
Trigger: CGCCCGCAGCATGGGTGCCAAAACGGTCATCGCCAT...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCACCAAAGTCCATGGTCTaGAAGCAGTCGATGGGCGGG +
Preference number: 5 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAPKSMV*KQSMGG
Trigger: CCCGCCCATCGACTGCTTCAAGACCATGGACTTTGG...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CAA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGGGGCAGACAGCGTCGTaGCCGGAGAATCGACTTCTC +
Preference number: 5 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRGQTAS*PENRLL
Trigger: GAGAAGTCGATTCTCCGGCAACGACGCTGTCTGCCC...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CAA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGGCAGACAGCGTCGTaGCCGGAGAATCGACTTCTC +
Preference number: 5 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGGQTAS*PENRLL
Trigger: GAGAAGTCGATTCTCCGGCAACGACGCTGTCTGCCC...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CAA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTGGGCAGACAGCGTCGTaGCCGGAGAATCGACTTCTC +
Preference number: 5 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGGQTAS*PENRLL
Trigger: GAGAAGTCGATTCTCCGGCAACGACGCTGTCTGCCC...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CAA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCACAAGAGGCGAGTTTATaGGGGGAGGGGCTGGTCAAG +
Preference number: 5 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAQEASL*GEGLVK
Trigger: CTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTG...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CAA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCCCCATCATTCCAGTTaGCAGCGGAGCCTCCATCGG +
Preference number: 5 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGPHHSS*QRSLHR
Trigger: CCGATGGAGGCTCCGCTGCAAACTGGAATGATGGGG...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000414982.7
CDS TCA 90 bp CAGCCTGCAGGCAGGTCCCCACAGGGCACGGTCCTCTGCACCTGGTaGCTTCCTCCCGGGTCACTGCCCTGTTTCAGAAGAGTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: QPAGRSPQGTVLCTW*LPPGSLPCFRRVLG
Trigger: TCCCAGGACTCTTCTGAAACAGGGCAGTGACCCGGGAGGAAGTCACCAGGTGCAGAGGACCGTGCCCTGTGGGGACCTGCCTGCAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450331.7
ENST00000601001.5
CDS TCA 90 bp GCTGGGAGGCACGGGAGTACTGCCGGGGCATCCGCGGAAGGCGTCTaGTACCCACGTTTCAGAAGAGTCCTGGGATGCTTGGGGTGGCGT +
Preference number: 5 (lower is better)
Translates to: AGRHGSTAGASAEGV*YPRFRRVLGCLGWR
Trigger: ACGCCACCCCAAGCATCCCAGGACTCTTCTGAAACGTGGGTATCAGACGCCTTCCGCGGATGCCCCGGCAGTACTCCCGTGCCTCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594754.5
CDS GCA 90 bp CAATCCGCATCAGCTTGGCCAGCTCCTGCTTTGCTGCCTCGAAGATaGTGCTGGTCTGGCGGCCCTGGTAGGGCCCGAAAGGGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: QSASAWPAPALLPRR*CWSGGPGRARKGSH
Trigger: GTGGCTGCCCTTTCGGGCCCTACCAGGGCCGCCAGACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000595176.5
ENST00000595889.1
ENST00000599311.5
ENST00000600737.6
CDS GCA 90 bp GGAGGGGTCCTCAATCCGCATCAGCTTGGCCAGCTCCTGCTTTGCTaGCTCGAAGATGCTGCTGGTCTGGCGGCCCTGGTAGGGCCCGAA +
Preference number: 5 (lower is better)
Translates to: GGVLNPHQLGQLLLC*LEDAAGLAALVGPE
Trigger: TTCGGGCCCTACCAGGGCCGCCAGACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTGAGGACCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000595176.5
ENST00000595889.1
ENST00000600737.6
CDS GCA 90 bp AAGTCCATCTGGCGCACGAAGGGCGACATCCTGGCTGCCACCGTGTaGGCCGCACTCAGCACCACACTGGGCTGTGCGCGCATGATCTCA +
Preference number: 5 (lower is better)
Translates to: KSIWRTKGDILAATV*AALSTTLGCARMIS
Trigger: TGAGATCATGCGCGCACAGCCCAGTGTGGTGCTGAGTGCGGCGCACACGGTGGCAGCCAGGATGTCGCCCTTCGTGCGCCAGATGGACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594864.1
ENST00000595176.5
ENST00000600737.6
CDS GCA 90 bp CAGGCTCACGTCCTCAATCCGCATCAGCTTGGCCAGCTCCTGCTTTaGTGCCTCGAAGATGCTGCTGGTCTGGCGGCCCTGGTAGGGCCC +
Preference number: 5 (lower is better)
Translates to: QAHVLNPHQLGQLLL*CLEDAAGLAALVGP
Trigger: GGGCCCTACCAGGGCCGCCAGACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTGAGGACGTGAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545201.6
CDS GCA 90 bp GCTGCCCACCTCAATCCGCATCAGCTTGGCCAGCTCCTGCTTTGCTaGCTCGAAGATGCTGCTGGTCTGGCGGCCCTGGTAGGGCCCGAA +
Preference number: 5 (lower is better)
Translates to: AAHLNPHQLGQLLLC*LEDAAGLAALVGPE
Trigger: TTCGGGCCCTACCAGGGCCGCCAGACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTGAGGTGGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599311.5
CDS-3UTR CAA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGAGCCTCCATCGGTaGATTCCAGCTGGACGGCCG +
Preference number: 5 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPRSLHR*IPAGRP
Trigger: CGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCG...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CAA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCAAAGCTCTCCGGGTACTaGGTGAAGACCGCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQAKLSGY*VKTAEN
Trigger: ATTCTCCGCGGTCTTCACCAAGTACCCGGAGAGCTT...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCATGGCCAGCTCCTGCTTaGCTGCCTCGAAGATGCTGC +
Preference number: 5 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAWPAPA*LPRRCC
Trigger: GCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCA...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATCAATCCGCATCAGCTaGGCCAGCTCCTGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: HPRSGQVSPVCGPRGSQASIRIS*ASSCFA
Trigger: AGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTGA...TGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGATGATGGTGCCAGCTTaGGCGTGGTGCAGCAAGACT +
Preference number: 5 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQMMVPA*AWCSKT
Trigger: AGTCTTGCTGCACCACGCCAAAGCTGGCACCATCAT...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR CAA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGACACACGTCCTCCGCCTaGTCGATCATGCGCTGGTAC +
Preference number: 5 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGHTSSA*SIMRWY
Trigger: GTACCAGCGCATGATCGACAAGGCGGAGGACGTGTG...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTGAAGGTGCAGTCGCGTaGGGCTCGCAGTGTGAAGAT +
Preference number: 5 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGEGAVA*GSQCED
Trigger: ATCTTCACACTGCGAGCCCAACGCGACTGCACCTTC...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGTGCTGGGAAGGGTCCTaGCAGCTGCTGCAAATTCCC +
Preference number: 5 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGCWEGS*QLLQIP
Trigger: GGGAATTTGCAGCAGCTGCAAGGACCCTTCCCAGCA...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
CDS-3UTR CAA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGCACACACAGGCAGGATaGCCACAGTTGCCAGGTTGC +
Preference number: 5 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRHTQAG*PQLPGC
Trigger: GCAACCTGGCAACTGTGGCAATCCTGCCTGTGTGTG...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGCCAAAGTCCATGGTCTaGAAGCAGTCGATGGGCGGG +
Preference number: 5 (lower is better)
Translates to: QGRSVQCVGRGGHRHSSRPKSMV*KQSMGG
Trigger: CCCGCCCATCGACTGCTTCAAGACCATGGACTTTGG...CCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CAA 90 bp GCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATTTTCTCAATGACGTaGCCACGGCTCCAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: ASPLRAGQSSVWAAGVTGIFSMT*PRLQPP
Trigger: TGGAGGCTGGAGCCGTGGCAACGTCATTGAGAAAAT...GCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGGCAGACAGCGTCGTaGCCGGAGAATCGACTTCTC +
Preference number: 5 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAGQTAS*PENRLL
Trigger: GAGAAGTCGATTCTCCGGCAACGACGCTGTCTGCCC...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CAA 90 bp CTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGATGGTGGCGCCATTGTaGGAAAATTCCTGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: LHPRSGQVSPVCGPRGSQMVAPL*ENSWVA
Trigger: GGCCACCCAGGAATTTTCCAACAATGGCGCCACCAT...CTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000545201.6
CDS-3UTR CAA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGCCTGGGAAGGGTCCTaGCAGCTGCTGCAAATTCCC +
Preference number: 5 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAAWEGS*QLLQIP
Trigger: GGGAATTTGCAGCAGCTGCAAGGACCCTTCCCAGGC...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000545201.6
ENST00000600737.6
CDS GCA 90 bp GCTCACGTCCTCAATCCGCATCAGCTTGGCCAGCTCCTGCTTTGCTaGCTCGAAGATGCTGCTGGTCTGGCGGCCCTGGTAGGGCCCGAA +
Preference number: 5 (lower is better)
Translates to: AHVLNPHQLGQLLLC*LEDAAGLAALVGPE
Trigger: TTCGGGCCCTACCAGGGCCGCCAGACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTGAGGACGTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545201.6
CDS GCA 90 bp ATGGGCAGCTTGGGCATGTGTCCCGTCATCGAGCCTGTCTGTGTGTaGCCACGCGTGTGCGTGTGTGTGGTGCGGGAGGTGCTTGCGTGT +
Preference number: 5 (lower is better)
Translates to: MGSLGMCPVIEPVCV*PRVCVCVVREVLAC
Trigger: ACACGCAAGCACCTCCCGCACCACACACACGCACACGCGTGGGCACACACAGACAGGCTCGATGACGGGACACATGCCCAAGCTGCCCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595352.1
CDS CCA 90 bp TGCCACAGTTGCCAGGTTGCTGGCTGGGTTGGTGAGTTCCGAGTGTaGGGGCACACCCAACCCAGAGCCTGGGAAGGGTCCTTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: CHSCQVAGWVGEFRV*GHTQPRAWEGSLQL
Trigger: CAGCTGCAAGGACCCTTCCCAGGCTCTGGGTTGGGTGTGCCCCCACACTCGGAACTCACCAACCCAGCCAGCAACCTGGCAACTGTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000545201.6
ENST00000599951.1
ENST00000600737.6
CDS CCA 90 bp ACGTCCTGGTCTCCCTGGCGGGCAATGATGGTGCCAGCTTTGGCGTaGTGCAGCAAGACTCTGCTGTTCAGGAGGGAGGGGTCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: TSWSPWRAMMVPALA*CSKTLLFRREGSWG
Trigger: TCCCCAGGACCCCTCCCTCCTGAACAGCAGAGTCTTGCTGCACCACGCCAAAGCTGGCACCATCATTGCCCGCCAGGGAGACCAGGACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599311.5
CDS-3UTR CAA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGAGAGTCCTGGGATGCTaGGGGTGGCGTGGGCTTGCA +
Preference number: 5 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPRVLGC*GWRGLA
Trigger: TGCAAGCCCACGCCACCCCAAGCATCCCAGGACTCT...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CAA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAAAGCACCATTCCAGTTaGCAGCGGAGCCTCCATCGG +
Preference number: 5 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAKHHSS*QRSLHR
Trigger: CCGATGGAGGCTCCGCTGCAAACTGGAATGGTGCTT...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221249.10
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CAA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTAAGCTCTCCGGGTACTaGGTGAAGACCGCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGKLSGY*VKTAEN
Trigger: ATTCTCCGCGGTCTTCACCAAGTACCCGGAGAGCTT...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCTGGCCAGCTCCTGCTTaGCTGCCTCGAAGATGCTGC +
Preference number: 5 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRWPAPA*LPRRCC
Trigger: GCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCA...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGTCAATCCGCATCAGCTaGGCCAGCTCCTGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGSIRIS*ASSCFA
Trigger: AGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTGA...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAATGATGGTGCCAGCTTaGGCGTGGTGCAGCAAGACT +
Preference number: 5 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIMMVPA*AWCSKT
Trigger: AGTCTTGCTGCACCACGCCAAAGCTGGCACCATCAT...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR CAA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAGAAGGTGCAGTCGCGTaGGGCTCGCAGTGTGAAGAT +
Preference number: 5 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGEGAVA*GSQCED
Trigger: ATCTTCACACTGCGAGCCCAACGCGACTGCACCTTC...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGCCCTCGGGAAGCTaGGCCAGCTCCGTGTCGCGC +
Preference number: 5 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSVPSGS*ASSVSR
Trigger: GCGCGACACGGAGCTGGCCAAGCTTCCCGAGGGCAC...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCATGCTGGGAAGGGTCCTaGCAGCTGCTGCAAATTCCC +
Preference number: 5 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAACWEGS*QLLQIP
Trigger: GGGAATTTGCAGCAGCTGCAAGGACCCTTCCCAGCA...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
CDS-3UTR CAA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGCCACAGTTGCCAGGTaGCTGGCTGGGTTGGTGAGT +
Preference number: 5 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRATVAR*LAGLVS
Trigger: ACTCACCAACCCAGCCAGCAACCTGGCAACTGTGGC...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGCAGGATTGCCACAGTaGCCAGGTTGCTGGCTGGGT +
Preference number: 5 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRAGLPQ*PGCWLG
Trigger: ACCCAGCCAGCAACCTGGCAACTGTGGCAATCCTGC...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGACAAGAGGCGAGTTTATaGGGGGAGGGGCTGGTCAAG +
Preference number: 5 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGQEASL*GEGLVK
Trigger: CTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTG...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS TCA 90 bp ACACAGGCAGGATTGCCACAGTTGCCAGGTTGCTGGCTGGGTTGGTaGGTTCCGAGTGTGGGGGCACACCCAACCCAGAGCCTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: TQAGLPQLPGCWLGW*VPSVGAHPTQSLLG
Trigger: TCCCAGCAGGCTCTGGGTTGGGTGTGCCCCCACACTCGGAACTCACCAACCCAGCCAGCAACCTGGCAACTGTGGCAATCCTGCCTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
CDS TCA 90 bp ACACAGGCAGGATTGCCACAGTTGCCAGGTTGCTGGCTGGGTTGGTaGGTTCCGAGTGTGGGGGCACACCCAACCCAGAGCCTGGGAAGG +
Preference number: 5 (lower is better)
Translates to: TQAGLPQLPGCWLGW*VPSVGAHPTQSLGR
Trigger: CCTTCCCAGGCTCTGGGTTGGGTGTGCCCCCACACTCGGAACTCACCAACCCAGCCAGCAACCTGGCAACTGTGGCAATCCTGCCTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000545201.6
ENST00000599951.1
ENST00000600737.6
CDS GCA 90 bp TCCTGGTCTCCCTGGCGGGCAATGATGGTGCCAGCTTTGGCGTGGTaGAGCAAGACTCTGCTGTTCAGGAGGGAGGGGTCCTCAATCCGC +
Preference number: 5 (lower is better)
Translates to: SWSPWRAMMVPALAW*SKTLLFRREGSSIR
Trigger: GCGGATTGAGGACCCCTCCCTCCTGAACAGCAGAGTCTTGCTGCACCACGCCAAAGCTGGCACCATCATTGCCCGCCAGGGAGACCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000595176.5
ENST00000595889.1
ENST00000600737.6
CDS CCA 90 bp CACGTAGTAGTGAAGTTATGGGGGCTCTATGGCACAGAGCATCACTaGGACTCCGGGACCGATGGTGGCGCCATTGCCAGGGGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: HVVVKLWGLYGTEHH*DSGTDGGAIARGRS
Trigger: GCTGCGGCCCCTGGCAATGGCGCCACCATCGGTCCCGGAGTCCCAGTGATGCTCTGTGCCATAGAGCCCCCATAACTTCACTACTACGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221249.10
ENST00000601001.5
CDS CCA 90 bp CTCAGCACACACAGGCAGGATTGCCACAGTTGCCAGGTTGCTGGCTaGGTTGGTGAGTTCCGAGTGTGGGGGCACACCCAACCCAGAGCC +
Preference number: 5 (lower is better)
Translates to: LSTHRQDCHSCQVAG*VGEFRVWGHTQPRA
Trigger: GGCTCTGGGTTGGGTGTGCCCCCACACTCGGAACTCACCAACCCAGCCAGCAACCTGGCAACTGTGGCAATCCTGCCTGTGTGTGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599951.1
ENST00000600737.6
CDS CCA 90 bp TTCCTCCCGGGTCACTGCCCTGTTTCAGAAGAGTCCTGGGATGCTTaGGGTGGCGTGGGCTTGCAAGGCGCTGCTGGTTTTTGCCGGGGA +
Preference number: 5 (lower is better)
Translates to: FLPGHCPVSEESWDA*GGVGLQGAAGFCRG
Trigger: TCCCCGGCAAAAACCAGCAGCGCCTTGCAAGCCCACGCCACCCCAAGCATCCCAGGACTCTTCTGAAACAGGGCAGTGACCCGGGAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450331.7
ENST00000601001.5
CDS CCA 90 bp GCACCATTCCAGTTTGCAGCGGAGCCTCCATCGGTTGATTCCAGCTaGACGGCCGATCTGGTAGCCCGGAGTCTGTCAGCAGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: APFQFAAEPPSVDSS*TADLVARSLSAACR
Trigger: CCTGCAGGCTGCTGACAGACTCCGGGCTACCAGATCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCGCTGCAAACTGGAATGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450331.7
CDS CCA 90 bp ACAATACTACTGCTGGGAAAACCAGGAGGTGGGTGGGCACATTCCTaGGGTGCTTATGAGAGCGGGCCTGGGGAGGGCGTCCGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: TILLLGKPGGGWAHS*GAYESGPGEGVRAP
Trigger: AGGAGCCCGGACGCCCTCCCCAGGCCCGCTCTCATAAGCACCCCAGGAATGTGCCCACCCACCTCCTGGTTTTCCCAGCAGTAGTATTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594098.1
ENST00000596515.5
CDS-3UTR CAA 90 bp CAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTAGGCGCTGCTGGTTTTaGCCGGGGATTTACTATCAC +
Preference number: 5 (lower is better)
Translates to: QHCIPAQGRSVQCVGRGGRRCWF*PGIYYH
Trigger: GTGATAGTAAATCCCCGGCAAAAACCAGCAGCGCCT...ACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CAA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTAGAGTCCTGGGATGCTaGGGGTGGCGTGGGCTTGCA +
Preference number: 5 (lower is better)
Translates to: GAGQVISATLHPRSGQVSRVLGC*GWRGLA
Trigger: TGCAAGCCCACGCCACCCCAAGCATCCCAGGACTCT...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CAA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGAAGCTCTCCGGGTACTaGGTGAAGACCGCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRKLSGY*VKTAEN
Trigger: ATTCTCCGCGGTCTTCACCAAGTACCCGGAGAGCTT...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGATCAATCCGCATCAGCTaGGCCAGCTCCTGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGSIRIS*ASSCFA
Trigger: AGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTGA...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp GTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGTCTGGAACCTTTACCTaGTCAGCCCAGGGATTCAGC +
Preference number: 5 (lower is better)
Translates to: VQHCIPAQGRSVQCVGRGSGTFT*SAQGFS
Trigger: GCTGAATCCCTGGGCTGACAAGGTAAAGGTTCCAGA...CCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CAA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCCAAAGTCCATGGTCTaGAAGCAGTCGATGGGCGGG +
Preference number: 5 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRPKSMV*KQSMGG
Trigger: CCCGCCCATCGACTGCTTCAAGACCATGGACTTTGG...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CAA 90 bp TCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAATTTTCTCAATGACGTaGCCACGGCTCCAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: SPLRAGQSSVWAAGVTGIIFSMT*PRLQPP
Trigger: TGGAGGCTGGAGCCGTGGCAACGTCATTGAGAAAAT...TATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCCAAGAGGCGAGTTTATaGGGGGAGGGGCTGGTCAAG +
Preference number: 5 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRQEASL*GEGLVK
Trigger: CTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTG...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CAA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGGCCTGGGAAGGGTCCTaGCAGCTGCTGCAAATTCCC +
Preference number: 5 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPAWEGS*QLLQIP
Trigger: GGGAATTTGCAGCAGCTGCAAGGACCCTTCCCAGGC...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545201.6
ENST00000600737.6
CDS GCA 90 bp CAGCGTGAAGGCCACCATGGGGACCTCAGCACACACAGGCAGGATTaGCACAGTTGCCAGGTTGCTGGCTGGGTTGGTGAGTTCCGAGTG +
Preference number: 5 (lower is better)
Translates to: QREGHHGDLSTHRQD*HSCQVAGWVGEFRV
Trigger: CACTCGGAACTCACCAACCCAGCCAGCAACCTGGCAACTGTGGCAATCCTGCCTGTGTGTGCTGAGGTCCCCATGGTGGCCTTCACGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599951.1
ENST00000600737.6
CDS GCA 90 bp CTGGTAGCCCGGAGTCCTGGGAAATCAAGGAGTCGAAGGAACCCGTaGAAGTCGTCAATCTGGGCCCACCTCTCCCCTGCCTCAAGCCCT +
Preference number: 5 (lower is better)
Translates to: LVARSPGKSRSRRNP*KSSIWAHLSPASSP
Trigger: AGGGCTTGAGGCAGGGGAGAGGTGGGCCCAGATTGACGACTTGCACGGGTTCCTTCGACTCCTTGATTTCCCAGGACTCCGGGCTACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594754.5
CDS CCA 90 bp ACGTCCTGGTCTCCCTGGCGGGCAATGATGGTGCCAGCTTTGGCGTaGTGCAGCAAGACTCTGCTGTTCAGGAGGGAGGGGTCCTCAATC +
Preference number: 5 (lower is better)
Translates to: TSWSPWRAMMVPALA*CSKTLLFRREGSSI
Trigger: GATTGAGGACCCCTCCCTCCTGAACAGCAGAGTCTTGCTGCACCACGCCAAAGCTGGCACCATCATTGCCCGCCAGGGAGACCAGGACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000595176.5
ENST00000595889.1
ENST00000600737.6
CDS CCA 90 bp GCACCATTCCAGTTTGCAGCGGAGCCTCCATCGGTTGATTCCAGCTaGACGGCCGATCTGGTAGCCCGGAGTCCTAGATACTCGGCTCCC +
Preference number: 5 (lower is better)
Translates to: APFQFAAEPPSVDSS*TADLVARSPRYSAP
Trigger: GGGAGCCGAGTATCTAGGACTCCGGGCTACCAGATCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCGCTGCAAACTGGAATGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600942.5
CDS CCA 90 bp GCACCATTCCAGTTTGCAGCGGAGCCTCCATCGGTTGATTCCAGCTaGACGGCCGATCTGGTAGCCCGGAGTCCTGGTACCCACTGTCAG +
Preference number: 5 (lower is better)
Translates to: APFQFAAEPPSVDSS*TADLVARSPGTHCQ
Trigger: CTGACAGTGGGTACCAGGACTCCGGGCTACCAGATCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCGCTGCAAACTGGAATGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593924.5
ENST00000601001.5
CDS CCA 90 bp CGGAAGGCGTCTGATACCCACGTTTCAGAAGAGTCCTGGGATGCTTaGGGTGGCGTGGGCTTGCAAGGCGCTGCTGGTTTTTGCCGGGGA +
Preference number: 5 (lower is better)
Translates to: RKASDTHVSEESWDA*GGVGLQGAAGFCRG
Trigger: TCCCCGGCAAAAACCAGCAGCGCCTTGCAAGCCCACGCCACCCCAAGCATCCCAGGACTCTTCTGAAACGTGGGTATCAGACGCCTTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594754.5
CDS CCA 90 bp GGGCATCCGCGGAAGGCGTCTGATACCCACGTTTCAGAAGAGTCCTaGGATGCTTGGGGTGGCGTGGGCTTGCAAGGCGCTGCTGGTTTT +
Preference number: 5 (lower is better)
Translates to: GHPRKASDTHVSEES*DAWGGVGLQGAAGF
Trigger: AAAACCAGCAGCGCCTTGCAAGCCCACGCCACCCCAAGCATCCCAGGACTCTTCTGAAACGTGGGTATCAGACGCCTTCCGCGGATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594754.5
CDS-3UTR CAA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCTCAATCCGCATCAGCTaGGCCAGCTCCTGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRSIRIS*ASSCFA
Trigger: AGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTGA...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGCCACAGTTGCCAGGTaGCTGGCTGGGTTGGTGAGT +
Preference number: 5 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSATVAR*LAGLVS
Trigger: ACTCACCAACCCAGCCAGCAACCTGGCAACTGTGGC...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCACAGGGAGCCATCTTaGTGGACTCGCATGGCTGAG +
Preference number: 5 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPHREPS*WTRMAE
Trigger: CTCAGCCATGCGAGTCCACAAAGATGGCTCCCTGTG...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp AGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGTCTGGAACCTTTACCTaGTCAGCCCAGGGATTCAGC +
Preference number: 5 (lower is better)
Translates to: SATLHPRSGQVSPVCGPRSGTFT*SAQGFS
Trigger: GCTGAATCCCTGGGCTGACAAGGTAAAGGTTCCAGA...CCGCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CAA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGGGCAGACAGCGTCGTaGCCGGAGAATCGACTTCTC +
Preference number: 5 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSGQTAS*PENRLL
Trigger: GAGAAGTCGATTCTCCGGCAACGACGCTGTCTGCCC...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS TCA 90 bp ATCACGCCAAGCACCATTCCAGTTTGCAGCGGAGCCTCCATCGGTTaGTTCCAGCTGGACGGCCGATCTGGTAGCCCGGAGTCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: ITPSTIPVCSGASIG*FQLDGRSGSPESVS
Trigger: GCTGACAGACTCCGGGCTACCAGATCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCGCTGCAAACTGGAATGGTGCTTGGCGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450331.7
CDS TCA 90 bp ATCACGCCAAGCACCATTCCAGTTTGCAGCGGAGCCTCCATCGGTTaGTTCCAGCTGGACGGCCGATCTGGTAGCCCGGAGTCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: ITPSTIPVCSGASIG*FQLDGRSGSPESWY
Trigger: GTACCAGGACTCCGGGCTACCAGATCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCGCTGCAAACTGGAATGGTGCTTGGCGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593924.5
ENST00000601001.5
CDS CCA 90 bp GTGGCCGGGAGGTGGCGGAGACAGAGGTATCCACGAGGGAGGAGGTaGATTGTGACACCTGGGAGAATGAAGGCGGAGATGGGTGAATTG +
Preference number: 5 (lower is better)
Translates to: VAGRWRRQRYPRGRR*IVTPGRMKAEMGEL
Trigger: CAATTCACCCATCTCCGCCTTCATTCTCCCAGGTGTCACAATCCACCTCCTCCCTCGTGGATACCTCTGTCTCCGCCACCTCCCGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598462.1
CDS-3UTR CAA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTTGGGGTGGCGTGGGCTaGCAAGGCGCTGCTGGTTTT +
Preference number: 5 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSWGGVG*QGAAGF
Trigger: AAAACCAGCAGCGCCTTGCAAGCCCACGCCACCCCA...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CAA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGAAGCTCTCCGGGTACTaGGTGAAGACCGCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPKLSGY*VKTAEN
Trigger: ATTCTCCGCGGTCTTCACCAAGTACCCGGAGAGCTT...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCAGGATTGCCACAGTaGCCAGGTTGCTGGCTGGGT +
Preference number: 5 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWAGLPQ*PGCWLG
Trigger: ACCCAGCCAGCAACCTGGCAACTGTGGCAATCCTGC...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCACACACAGGCAGGATaGCCACAGTTGCCAGGTTGC +
Preference number: 5 (lower is better)
Translates to: GAGQVISATLHPRSGQVSHTQAG*PQLPGC
Trigger: GCAACCTGGCAACTGTGGCAATCCTGCCTGTGTGTG...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCACACAGGGAGCCATCTTaGTGGACTCGCATGGCTGAG +
Preference number: 5 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSHREPS*WTRMAE
Trigger: CTCAGCCATGCGAGTCCACAAAGATGGCTCCCTGTG...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp GGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAAAGTCCATGGTCTaGAAGCAGTCGATGGGCGGG +
Preference number: 5 (lower is better)
Translates to: GAGQVISATLHPRSGQVSPKSMV*KQSMGG
Trigger: CCCGCCCATCGACTGCTTCAAGACCATGGACTTTGG...ACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CAA 90 bp TCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCATTTTCTCAATGACGTaGCCACGGCTCCAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: SVQHCIPAQGRSVQCVGRIFSMT*PRLQPP
Trigger: TGGAGGCTGGAGCCGTGGCAACGTCATTGAGAAAAT...GCGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCACAAGAGGCGAGTTTATaGGGGGAGGGGCTGGTCAAG +
Preference number: 5 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSQEASL*GEGLVK
Trigger: CTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTG...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS TCA 90 bp ATCACGCCAAGCACCATTCCAGTTTGCAGCGGAGCCTCCATCGGTTaGTTCCAGCTGGACGGCCGATCTGGTAGCCCGGAGTCGTTTCAG +
Preference number: 5 (lower is better)
Translates to: ITPSTIPVCSGASIG*FQLDGRSGSPESFQ
Trigger: CTGAAACGACTCCGGGCTACCAGATCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCGCTGCAAACTGGAATGGTGCTTGGCGTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000545201.6
ENST00000596515.5
ENST00000601668.5
CDS TCA 90 bp GCGCACGTACCGCCACAGGGAGCCATCTTTGTGGACTCGCATGGCTaGGGCGGTGATATCTGTGGTCACGTTGAAGTAAGGCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: AHVPPQGAIFVDSHG*GGDICGHVEVRQPQ
Trigger: CTGTGGCTGCCTTACTTCAACGTGACCACAGATATCACCGCCTCAGCCATGCGAGTCCACAAAGATGGCTCCCTGTGGCGGTACGTGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000595352.1
ENST00000600737.6
CDS TCA 90 bp CTCGATGTCCCCATCATTCCAGTTTGCAGCGGAGCCTCCATCGGTTaGTTCCAGCTGGACGGCCGATCTGGTAGCCCGGAGTCGTTTCAG +
Preference number: 5 (lower is better)
Translates to: LDVPIIPVCSGASIG*FQLDGRSGSPESFQ
Trigger: CTGAAACGACTCCGGGCTACCAGATCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCGCTGCAAACTGGAATGATGGGGACATCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414982.7
CDS CCA 90 bp GCACCATTCCAGTTTGCAGCGGAGCCTCCATCGGTTGATTCCAGCTaGACGGCCGATCTGGTAGCCCGGAGTCGTTTCAGAAGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: APFQFAAEPPSVDSS*TADLVARSRFRRVL
Trigger: CAGGACTCTTCTGAAACGACTCCGGGCTACCAGATCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCGCTGCAAACTGGAATGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000545201.6
ENST00000596515.5
ENST00000601668.5
CDS CCA 90 bp CACGTAGTAGTGAAGTTATGGGGGCTCTATGGCACAGAGCATCACTaGGACTCCGGGACCGATGGTGGCGCCATTGCTGGGAGGCGTAAC +
Preference number: 5 (lower is better)
Translates to: HVVVKLWGLYGTEHH*DSGTDGGAIAGRRN
Trigger: GTTACGCCTCCCAGCAATGGCGCCACCATCGGTCCCGGAGTCCCAGTGATGCTCTGTGCCATAGAGCCCCCATAACTTCACTACTACGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594098.1
ENST00000596515.5
CDS-3UTR CAA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGAGGCGCTGCTGGTTTTaGCCGGGGATTTACTATCAC +
Preference number: 5 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPRRCWF*PGIYYH
Trigger: GTGATAGTAAATCCCCGGCAAAAACCAGCAGCGCCT...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CAA 90 bp CTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAATGCGCAGGATCTTCTaGGCAATGTTGAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: LRAGQSSVWAAGVTGIAAMRRIF*AMLSIF
Trigger: GAAGATGCTCAACATTGCCAAGAAGATCCTGCGCAT...TGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp AGGGCAGGTCAGTCCAGTGTGTGGGCCGCGGGGGTCACAGGCATAGCAGCAGGAATGCGCAGGATCTTCTaGGCAATGTTGAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: RAGQSSVWAAGVTGIAAGMRRIF*AMLSIF
Trigger: GAAGATGCTCAACATTGCCAAGAAGATCCTGCGCAT...TCCTGCTGCTATGCCTGTGACCCCCGCGGCCCACACACTGGACTGACCTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGAAGGTGCAGTCGCGTaGGGCTCGCAGTGTGAAGAT +
Preference number: 5 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWEGAVA*GSQCED
Trigger: ATCTTCACACTGCGAGCCCAACGCGACTGCACCTTC...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCTCTGGAACCTTTACCTaGTCAGCCCAGGGATTCAGC +
Preference number: 5 (lower is better)
Translates to: HQCNTASPLRAGQSSVWASGTFT*SAQGFS
Trigger: GCTGAATCCCTGGGCTGACAAGGTAAAGGTTCCAGA...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CAA 90 bp ATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCGATTTTCTCAATGACGTaGCCACGGCTCCAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: ISATLHPRSGQVSPVCGPIFSMT*PRLQPP
Trigger: TGGAGGCTGGAGCCGTGGCAACGTCATTGAGAAAAT...CGGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS CCA 90 bp CCATCATTCCAGTTTGCAGCGGAGCCTCCATCGGTTGATTCCAGCTaGACGGCCGATCTGGTAGCCCGGAGTCGTTTCAGAAGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: PSFQFAAEPPSVDSS*TADLVARSRFRRVL
Trigger: CAGGACTCTTCTGAAACGACTCCGGGCTACCAGATCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCGCTGCAAACTGGAATGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414982.7
CDS-3UTR CAA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGATGATGGTGCCAGCTTaGGCGTGGTGCAGCAAGACT +
Preference number: 5 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWMMVPA*AWCSKT
Trigger: AGTCTTGCTGCACCACGCCAAAGCTGGCACCATCAT...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000600737.6
CDS-3UTR CAA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGGCCACAGTTGCCAGGTaGCTGGCTGGGTTGGTGAGT +
Preference number: 5 (lower is better)
Translates to: PRGEFIGGGAGQVISATLATVAR*LAGLVS
Trigger: ACTCACCAACCCAGCCAGCAACCTGGCAACTGTGGC...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTCACAGGGAGCCATCTTaGTGGACTCGCATGGCTGAG +
Preference number: 5 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSHREPS*WTRMAE
Trigger: CTCAGCCATGCGAGTCCACAAAGATGGCTCCCTGTG...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCATCTGGAACCTTTACCTaGTCAGCCCAGGGATTCAGC +
Preference number: 5 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSSGTFT*SAQGFS
Trigger: GCTGAATCCCTGGGCTGACAAGGTAAAGGTTCCAGA...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS-3UTR CAA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTCAAGAGGCGAGTTTATaGGGGGAGGGGCTGGTCAAG +
Preference number: 5 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSQEASL*GEGLVK
Trigger: CTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTG...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS TCA 90 bp CCGGACGTAACGCCACACACAGCCATCTTTGTGGACTCGCATGGCTaGGGCGGTGATATCTGTGGTCACGTTGAAGTAAGGCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: PDVTPHTAIFVDSHG*GGDICGHVEVRQPQ
Trigger: CTGTGGCTGCCTTACTTCAACGTGACCACAGATATCACCGCCTCAGCCATGCGAGTCCACAAAGATGGCTGTGTGTGGCGTTACGTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646984.1
CDS CCA 90 bp GCCGGGGATTTACTATCACGTAGTAGTGAAGTTATGGGGGCTCTATaGCACAGAGCATCACTGGGACTCCGGGACCGATGGTGGCGCCAT +
Preference number: 5 (lower is better)
Translates to: AGDLLSRSSEVMGAL*HRASLGLRDRWWRH
Trigger: ATGGCGCCACCATCGGTCCCGGAGTCCCAGTGATGCTCTGTGCCATAGAGCCCCCATAACTTCACTACTACGTGATAGTAAATCCCCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594754.5
ENST00000596515.5
ENST00000601001.5
ENST00000601668.5
CDS CCA 90 bp TTACCATTCCAGTTTGCAGCGGAGCCTCCATCGGTTGATTCCAGCTaGACGGCCGATCTGGTAGCCCGGAGTCCTGGGAAATCAAGGAGT +
Preference number: 5 (lower is better)
Translates to: LPFQFAAEPPSVDSS*TADLVARSPGKSRS
Trigger: ACTCCTTGATTTCCCAGGACTCCGGGCTACCAGATCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCGCTGCAAACTGGAATGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594754.5
CDS-3UTR CAA 90 bp CATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGGCCATGCGCAGGATCTTCTaGGCAATGTTGAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: HQCNTASPLRAGQSSVWAMRRIF*AMLSIF
Trigger: GAAGATGCTCAACATTGCCAAGAAGATCCTGCGCAT...GGCCCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTTCAATCCGCATCAGCTaGGCCAGCTCCTGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSSIRIS*ASSCFA
Trigger: AGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTGA...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGCACACACAGGCAGGATaGCCACAGTTGCCAGGTTGC +
Preference number: 5 (lower is better)
Translates to: PRGEFIGGGAGQVISATLHTQAG*PQLPGC
Trigger: GCAACCTGGCAACTGTGGCAATCCTGCCTGTGTGTG...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp AGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTGTGTGGATTTTCTCAATGACGTaGCCACGGCTCCAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: SHQCNTASPLRAGQSSVWIFSMT*PRLQPP
Trigger: TGGAGGCTGGAGCCGTGGCAACGTCATTGAGAAAAT...CCACACACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp GAGGGGCTGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAATGCGCAGGATCTTCTaGGCAATGTTGAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: EGLVKSSVQHCIPAQGRSMRRIF*AMLSIF
Trigger: GAAGATGCTCAACATTGCCAAGAAGATCCTGCGCAT...TGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCAGCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGAAGCTCTCCGGGTACTaGGTGAAGACCGCGGAGAAT +
Preference number: 5 (lower is better)
Translates to: PRGEFIGGGAGQVISATLKLSGY*VKTAEN
Trigger: ATTCTCCGCGGTCTTCACCAAGTACCCGGAGAGCTT...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS-3UTR CAA 90 bp TGGTCAAGTCATCAGTGCAACACTGCATCCCCGCTCAGGGCAGGTCAGTCCAGTTCTGGAACCTTTACCTaGTCAGCCCAGGGATTCAGC +
Preference number: 5 (lower is better)
Translates to: WSSHQCNTASPLRAGQSSSGTFT*SAQGFS
Trigger: GCTGAATCCCTGGGCTGACAAGGTAAAGGTTCCAGA...ACTGGACTGACCTGCCCTGAGCGGGGATGCAGTGTTGCACTGATGACTTGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS CCA 90 bp ATGGATGCTGCGGTTAAAGGCAGACCCAGTGAACATGGAGGTGACTaGGTACGTGAGGTCCAACACAGGTTCCAGCACCGAAGTCATGCT +
Preference number: 5 (lower is better)
Translates to: MDAAVKGRPSEHGGD*VREVQHRFQHRSHA
Trigger: AGCATGACTTCGGTGCTGGAACCTGTGTTGGACCTCACGTACCCAGTCACCTCCATGTTCACTGGGTCTGCCTTTAACCGCAGCATCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
ENST00000646984.1
CDS CCA 90 bp CACGTAGTAGTGAAGTTATGGGGGCTCTATGGCACAGAGCATCACTaGGACTCCGGGACCGATGGTGGCGCCATTGTTGGAAAATTCCTG +
Preference number: 5 (lower is better)
Translates to: HVVVKLWGLYGTEHH*DSGTDGGAIVGKFL
Trigger: CAGGAATTTTCCAACAATGGCGCCACCATCGGTCCCGGAGTCCCAGTGATGCTCTGTGCCATAGAGCCCCCATAACTTCACTACTACGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000545201.6
ENST00000594754.5
ENST00000601668.5
CDS-3UTR CAA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGAGGCGCTGCTGGTTTTaGCCGGGGATTTACTATCAC +
Preference number: 5 (lower is better)
Translates to: PRGEFIGGGAGQVISATLRRCWF*PGIYYH
Trigger: GTGATAGTAAATCCCCGGCAAAAACCAGCAGCGCCT...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
CDS-3UTR CAA 90 bp CCAAGAGGCGAGTTTATTGGGGGAGGGGCTGGTCAAGTCATCAGTGCAACACTGTCTGGAACCTTTACCTaGTCAGCCCAGGGATTCAGC +
Preference number: 5 (lower is better)
Translates to: PRGEFIGGGAGQVISATLSGTFT*SAQGFS
Trigger: GCTGAATCCCTGGGCTGACAAGGTAAAGGTTCCAGA...CAGTGTTGCACTGATGACTTGACCAGCCCCTCCCCCAATAAACTCGCCTCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599947.1
ENST00000600737.6
CDS TCA 90 bp GAGGAGGTGGATTGTGACACCTGGGAGAATGAAGGCGGAGATGGGTaGATTGCTAATTCAGACCTTGGAGAAGAGGCAGACGGATCCAGG +
Preference number: 5 (lower is better)
Translates to: EEVDCDTWENEGGDG*IANSDLGEEADGSR
Trigger: CCTGGATCCGTCTGCCTCTTCTCCAAGGTCTGAATTAGCAATTCACCCATCTCCGCCTTCATTCTCCCAGGTGTCACAATCCACCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598462.1
CDS CCA 72 bp CCGCGGAGAATGCTTCCACCGGCAGGCGCAGCACCGTaGAGTCCCGGGCCGCCCGGGCAGACACGGTCCGCT +
Preference number: 6 (lower is better)
Translates to: PRRMLPPAGAAP*SPGPPGQTRSA
Trigger: AGCGGACCGTGTCTGCCCGGGCGGCCCGGGACTCCACGGTGCTGCGCCTGCCGGTGGAAGCATTCTCCGCGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594551.1
ENST00000595264.5
ENST00000600737.6
CDS CCA 72 bp TGGCCAGCTCCGTGTCGCGCACCGCGTGCACCGTCGTaGCTCGCGGCTGCCGGGTCAGTGCCTCCACCACGC +
Preference number: 6 (lower is better)
Translates to: WPAPCRAPRAPS*LAAAGSVPPPR
Trigger: GCGTGGTGGAGGCACTGACCCGGCAGCCGCGAGCCACGACGGTGCACGCGGTGCGCGACACGGAGCTGGCCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS CCA 72 bp CGTCCCGCCGAGCCTTCCCCGGGCGCCAGGACGTCCTaGAACCCATCCCTCTCCGCCACCTTCGCCCCCGAG +
Preference number: 6 (lower is better)
Translates to: RPAEPSPGARTS*NPSLSATFAPE
Trigger: CTCGGGGGCGAAGGTGGCGGAGAGGGATGGGTTCCAGGACGTCCTGGCGCCCGGGGAAGGCTCGGCGGGACG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414982.7
ENST00000600737.6
CDS CCA 72 bp TGGCCAGCTCCGTGTCGCGCACCGCGTGCACCGTCGTaGCTCGCGGCTGCCGGGTCAGTGCCTCCACCTGGG +
Preference number: 6 (lower is better)
Translates to: WPAPCRAPRAPS*LAAAGSVPPPG
Trigger: CCCAGGTGGAGGCACTGACCCGGCAGCCGCGAGCCACGACGGTGCACGCGGTGCGCGACACGGAGCTGGCCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599951.1
CDS GCA 72 bp GTGTCGCGCACCGCGTGCACCGTCGTGGCTCGCGGCTaGCGGGTCAGTGCCTCCACCACGCCGATGAGGTCG +
Preference number: 6 (lower is better)
Translates to: VSRTACTVVARG*RVSASTTPMRS
Trigger: CGACCTCATCGGCGTGGTGGAGGCACTGACCCGGCAGCCGCGAGCCACGACGGTGCACGCGGTGCGCGACAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS GCA 72 bp TCGGGAAGCTTGGCCAGCTCCGTGTCGCGCACCGCGTaGACCGTCGTGGCTCGCGGCTGCCGGGTCAGTGCC +
Preference number: 6 (lower is better)
Translates to: SGSLASSVSRTA*TVVARGCRVSA
Trigger: GGCACTGACCCGGCAGCCGCGAGCCACGACGGTGCACGCGGTGCGCGACACGGAGCTGGCCAAGCTTCCCGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599951.1
ENST00000600737.6
CDS CCA 72 bp GTCGTGGCTCGCGGCTGCCGGGTCAGTGCCTCCACCTaGGGGGCCGCGTGCATGATTGGGGCTGCTTGGGTG +
Preference number: 6 (lower is better)
Translates to: VVARGCRVSAST*GAACMIGAAWV
Trigger: CACCCAAGCAGCCCCAATCATGCACGCGGCCCCCCAGGTGGAGGCACTGACCCGGCAGCCGCGAGCCACGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599951.1
CDS GCA 72 bp TGGCGCACGAAGGGCGACATCCTGGCTGCCACCGTGTaGGCCGCACTCAGCACCACACTGGGCTGTGCGCGC +
Preference number: 6 (lower is better)
Translates to: WRTKGDILAATV*AALSTTLGCAR
Trigger: GCGCGCACAGCCCAGTGTGGTGCTGAGTGCGGCGCACACGGTGGCAGCCAGGATGTCGCCCTTCGTGCGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594864.1
ENST00000595176.5
ENST00000599311.5
ENST00000600737.6
CDS CCA 72 bp CTATGGCACAGAGCATCACTGGGACTCCGGGACCGATaGTGGCGCCATTGCCAGGGGCCGCAGCCGGGGTCC +
Preference number: 6 (lower is better)
Translates to: LWHRASLGLRDR*WRHCQGPQPGS
Trigger: GGACCCCGGCTGCGGCCCCTGGCAATGGCGCCACCATCGGTCCCGGAGTCCCAGTGATGCTCTGTGCCATAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000221249.10
ENST00000601001.5
CDS CCA 72 bp CTGGGTGGCCGGTCCTCTTCCACCTCAGGGCACAGCTaGCTACCGGTGTGGAAACACCCAGGGGCCGCAGCC +
Preference number: 6 (lower is better)
Translates to: LGGRSSSTSGHS*LPVWKHPGAAA
Trigger: GGCTGCGGCCCCTGGGTGTTTCCACACCGGTAGCCAGCTGTGCCCTGAGGTGGAAGAGGACCGGCCACCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594098.1
ENST00000594754.5
ENST00000601668.5
CDS TCA 72 bp CACCCCTCCTCCCCGCGCCATGCTTGGAAGGCCGACTaGGGCCGCCATGCTGAGTGTGGCCGCGCCTTAAAG +
Preference number: 6 (lower is better)
Translates to: HPSSPRHAWKAD*GRHAECGRALK
Trigger: CTTTAAGGCGCGGCCACACTCAGCATGGCGGCCTCAGTCGGCCTTCCAAGCATGGCGCGGGGAGGAGGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000221249.10
CDS GCA 72 bp GTCGCCCTGCCTGTACAGCGCGCGTCCCGCCTCCACTaGAGTCCAGTCGATGGCGAAGTCCATCTGGCGCAC +
Preference number: 6 (lower is better)
Translates to: VALPVQRASRLH*SPVDGEVHLAH
Trigger: GTGCGCCAGATGGACTTCGCCATCGACTGGACTGCAGTGGAGGCGGGACGCGCGCTGTACAGGCAGGGCGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594864.1
ENST00000600737.6
CDS GCA 72 bp CGTGTGCGTGTGTGTGGTGCGGGAGGTGCTTGCGTGTaGGGGTGGTGCGGGCGGCCACTTGCCTGGCAGATT +
Preference number: 6 (lower is better)
Translates to: RVRVCGAGGACV*GWCGRPLAWQI
Trigger: AATCTGCCAGGCAAGTGGCCGCCCGCACCACCCGCACACGCAAGCACCTCCCGCACCACACACACGCACACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595352.1
CDS GCA 72 bp GGCCAAAGGCCGACCTGGTACCCACTGTCAGCAGCCTaGAGGCAGGTCCCCACAGGGCACGGTCCTCTGCAC +
Preference number: 6 (lower is better)
Translates to: GQRPTWYPLSAA*RQVPTGHGPLH
Trigger: GTGCAGAGGACCGTGCCCTGTGGGGACCTGCCTGCAGGCTGCTGACAGTGGGTACCAGGTCGGCCTTTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594754.5
CDS CCA 72 bp GGGGCGAGGCTAGAGGGGCGCTGCGGGACTAAGGGATaGAGCAAACCGACCTCTCGGCCCTGGCCAGGAGAT +
Preference number: 6 (lower is better)
Translates to: GARLEGRCGTKG*SKPTSRPWPGD
Trigger: ATCTCCTGGCCAGGGCCGAGAGGTCGGTTTGCTCCATCCCTTAGTCCCGCAGCGCCCCTCTAGCCTCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594754.5
CDS CAA 90 bp TCTGTGTGTGCCCACGCGTGTGCGTGTGTGTGGTGCGGGAGGTGCTaGCGTGTGCGGGTGGTGCGGGCGGCCACTTGCCTGGCAGATTGT +
Preference number: 6 (lower is better)
Translates to: SVCAHACACVWCGRC*RVRVVRAATCLADC
Trigger: ACAATCTGCCAGGCAAGTGGCCGCCCGCACCACCCGCACACGCAAGCACCTCCCGCACCACACACACGCACACGCGTGGGCACACACAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595352.1
CDS TCA 72 bp GCGCCATGCTTGGAAGGCCGACTGAGGCCGCCATGCTaGGTGTGGCCGCGCCTTAAAGGGCCTCACACCGCT +
Preference number: 6 (lower is better)
Translates to: APCLEGRLRPPC*VWPRLKGPHTA
Trigger: AGCGGTGTGAGGCCCTTTAAGGCGCGGCCACACTCAGCATGGCGGCCTCAGTCGGCCTTCCAAGCATGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000221249.10
CDS TCA 72 bp TGGCCGCCCTGGGGTCTCCCTGGGCTCGTCTGTAGCTaGGGTGCTGACCATTCTCTTGGAGCCCCGCACAGG +
Preference number: 6 (lower is better)
Translates to: WPPWGLPGLVCS*GADHSLGAPHR
Trigger: CCTGTGCGGGGCTCCAAGAGAATGGTCAGCACCTCAGCTACAGACGAGCCCAGGGAGACCCCAGGGCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000595176.5
ENST00000595264.5
ENST00000599311.5
ENST00000600737.6
CDS TCA 72 bp ACCGCCACTCCGGCCCCGATCATCACGCCAAGCACCTaGGGGACGAACGGCACTGGCTGCGCACCGCAAATC +
Preference number: 6 (lower is better)
Translates to: TATPAPIITPST*GTNGTGCAPQI
Trigger: GATTTGCGGTGCGCAGCCAGTGCCGTTCGTCCCTCAGGTGCTTGGCGTGATGATCGGGGCCGGAGTGGCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414982.7
ENST00000600737.6
CDS GCA 72 bp GAAGTCCATCTGGCGCACGAAGGGCGACATCCTGGCTaGCACCGTGTGCGCCGCACTCAGCACCACACTGGG +
Preference number: 6 (lower is better)
Translates to: EVHLAHEGRHPG*HRVRRTQHHTG
Trigger: CCCAGTGTGGTGCTGAGTGCGGCGCACACGGTGGCAGCCAGGATGTCGCCCTTCGTGCGCCAGATGGACTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594864.1
ENST00000595176.5
ENST00000600737.6
CDS GCA 72 bp GCTGAGCCGGGCGGCTCCTGGGGCAGACAGCGTCGTTaGCGGAGAATCGACTTCTCCTCCTCCATCTCGGAG +
Preference number: 6 (lower is better)
Translates to: AEPGGSWGRQRR*RRIDFSSSISE
Trigger: CTCCGAGATGGAGGAGGAGAAGTCGATTCTCCGGCAACGACGCTGTCTGCCCCAGGAGCCGCCCGGCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000597202.1
ENST00000599947.1
ENST00000600737.6
CDS CCA 72 bp TGGCGAAGTCCATCTGGCGCACGAAGGGCGACATCCTaGCTGCCACCGTGTGCGCCGCACTCAGCACCACAC +
Preference number: 6 (lower is better)
Translates to: WRSPSGARRATS*LPPCAPHSAPH
Trigger: GTGTGGTGCTGAGTGCGGCGCACACGGTGGCAGCCAGGATGTCGCCCTTCGTGCGCCAGATGGACTTCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594864.1
ENST00000595176.5
ENST00000600737.6
CDS CCA 72 bp ACAGCGCGCGTCCCGCCTCCACTGCAGTCCAGTCGATaGCGAAGTCCATCTGGCGCACGAAGGGCGACATCC +
Preference number: 6 (lower is better)
Translates to: TARVPPPLQSSR*RSPSGARRATS
Trigger: GGATGTCGCCCTTCGTGCGCCAGATGGACTTCGCCATCGACTGGACTGCAGTGGAGGCGGGACGCGCGCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594864.1
ENST00000600737.6
CDS CCA 72 bp CTGGGTGGCCGGTCCTCTTCCACCTCAGGGCACAGCTaGCTACCGGTGTGGAAACACCTGCCGAGACGTGGG +
Preference number: 6 (lower is better)
Translates to: LGGRSSSTSGHS*LPVWKHLPRRG
Trigger: CCCACGTCTCGGCAGGTGTTTCCACACCGGTAGCCAGCTGTGCCCTGAGGTGGAAGAGGACCGGCCACCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545201.6
CDS CCA 72 bp CAGGAAAACGGGCCCGCAAACCGTGGGGTCCGGGAGTaGGCACCTAGATACTCGGCTCCCGACGCAAGCCTG +
Preference number: 6 (lower is better)
Translates to: QENGPANRGVRE*APRYSAPDASL
Trigger: CAGGCTTGCGTCGGGAGCCGAGTATCTAGGTGCCCACTCCCGGACCCCACGGTTTGCGGGCCCGTTTTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594754.5
CDS CAA 90 bp GGAGGGAGGGGTCCTCAATCCGCATCAGCTTGGCCAGCTCCTGCTTaGCTGCCTCGAAGATGCTGCTGGTCTGGCGGCCCTGGTAGGGCC +
Preference number: 6 (lower is better)
Translates to: GGRGPQSASAWPAPA*LPRRCCWSGGPGRA
Trigger: GGCCCTACCAGGGCCGCCAGACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTGAGGACCCCTCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000595176.5
ENST00000595889.1
ENST00000600737.6
CDS CAA 90 bp CTCGGCTGCCCACCTCAATCCGCATCAGCTTGGCCAGCTCCTGCTTaGCTGCCTCGAAGATGCTGCTGGTCTGGCGGCCCTGGTAGGGCC +
Preference number: 6 (lower is better)
Translates to: LGCPPQSASAWPAPA*LPRRCCWSGGPGRA
Trigger: GGCCCTACCAGGGCCGCCAGACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTGAGGTGGGCAGCCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599311.5
CDS GCA 72 bp TCAGCTTCTAGCACTGCGGGCGGGGGCTCCTTCCGCTaGAGCGTGGGCGTCTCTTTCTGGATGCGCAGGATC +
Preference number: 6 (lower is better)
Translates to: SASSTAGGGSFR*SVGVSFWMRRI
Trigger: GATCCTGCGCATCCAGAAAGAGACGCCCACGCTGCAGCGGAAGGAGCCCCCGCCCGCAGTGCTAGAAGCTGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000598462.1
ENST00000600737.6
ENST00000600942.5
ENST00000601001.5
ENST00000601668.5
ENST00000602191.5
CDS GCA 72 bp CAAGCTCTCCGGGTACTTGGTGAAGACCGCGGAGAATaGTTCCACCGGCAGGCGCAGCACCGTGGAGTCCCG +
Preference number: 6 (lower is better)
Translates to: QALRVLGEDRGE*FHRQAQHRGVP
Trigger: CGGGACTCCACGGTGCTGCGCCTGCCGGTGGAAGCATTCTCCGCGGTCTTCACCAAGTACCCGGAGAGCTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594551.1
ENST00000595264.5
ENST00000600737.6
CDS GCA 72 bp CCCGGGTCACTGCCCTGTTTCAGAAGAGTCCTGGGATaGTTGGGGTGGCGTGGGCTTGCAAGGCGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: PGSLPCFRRVLG*LGWRGLARRCW
Trigger: CCAGCAGCGCCTTGCAAGCCCACGCCACCCCAAGCATCCCAGGACTCTTCTGAAACAGGGCAGTGACCCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450331.7
ENST00000601001.5
CDS GCA 72 bp GACAGGGGCACTCCGAGCTCTGTGCAGACTCCACCCTaGCAGAGCTGGGGTACCGCGAACAGACGCCAGCAA +
Preference number: 6 (lower is better)
Translates to: DRGTPSSVQTPP*QSWGTANRRQQ
Trigger: TTGCTGGCGTCTGTTCGCGGTACCCCAGCTCTGGCAGGGTGGAGTCTGCACAGAGCTCGGAGTGCCCCTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602191.5
CDS CCA 72 bp GCCTCCACTGCAGTCCAGTCGATGGCGAAGTCCATCTaGCGCACGAAGGGCGACATCCTGGCTGCCACCGTG +
Preference number: 6 (lower is better)
Translates to: ASTAVQSMAKSI*RTKGDILAATV
Trigger: CACGGTGGCAGCCAGGATGTCGCCCTTCGTGCGCCAGATGGACTTCGCCATCGACTGGACTGCAGTGGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594864.1
ENST00000595176.5
ENST00000600737.6
CDS CCA 72 bp GATCATCACGCCAAGCACCTGAGGGACGAACGGCACTaGCTGCGCACCGCAAATCCGTCCCGCCGAGCCTTC +
Preference number: 6 (lower is better)
Translates to: DHHAKHLRDERH*LRTANPSRRAF
Trigger: GAAGGCTCGGCGGGACGGATTTGCGGTGCGCAGCCAGTGCCGTTCGTCCCTCAGGTGCTTGGCGTGATGATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414982.7
ENST00000600737.6
CDS CCA 72 bp TGCCAGGTTGCTGGCTGGGTTGGTGAGTTCCGAGTGTaGGGGCACACCCAACCCAGAGCCTGGGAAGGGTCC +
Preference number: 6 (lower is better)
Translates to: CQVAGWVGEFRV*GHTQPRAWEGS
Trigger: GGACCCTTCCCAGGCTCTGGGTTGGGTGTGCCCCCACACTCGGAACTCACCAACCCAGCCAGCAACCTGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000545201.6
ENST00000599951.1
ENST00000600737.6
CDS TCA 72 bp TCTGCACGACCCGCACCAAGCTCTCCGGGTACTTGGTaGAGACCGCGGAGAATGCTTCCACCGGCAGGCGCA +
Preference number: 6 (lower is better)
Translates to: SARPAPSSPGTW*RPRRMLPPAGA
Trigger: TGCGCCTGCCGGTGGAAGCATTCTCCGCGGTCTTCACCAAGTACCCGGAGAGCTTGGTGCGGGTCGTGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594551.1
ENST00000595264.5
ENST00000600737.6
CDS GCA 72 bp CTGGTAGCCCGGAGTCGTTTCAGAAGAGTCCTGGGATaGTTGGGGTGGCGTGGGCTTGCAAGGCGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: LVARSRFRRVLG*LGWRGLARRCW
Trigger: CCAGCAGCGCCTTGCAAGCCCACGCCACCCCAAGCATCCCAGGACTCTTCTGAAACGACTCCGGGCTACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000545201.6
ENST00000596515.5
ENST00000601668.5
CDS GCA 72 bp CGACTCATCCTCACAGTAGCTGTATTCACAGGCGCCTaGCGGCTGCTCACGAGGCTCCTGAGTGGGGGTCCG +
Preference number: 6 (lower is better)
Translates to: RLILTVAVFTGA*RLLTRLLSGGP
Trigger: CGGACCCCCACTCAGGAGCCTCGTGAGCAGCCGGCAGGCGCCTGTGAATACAGCTACTGTGAGGATGAGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000595176.5
ENST00000595889.1
ENST00000599311.5
ENST00000600737.6
CDS GCA 72 bp TCAGCTTGGCCAGCTCCTGCTTTGCTGCCTCGAAGATaGTGCTGGTCTGGCGGCCCTGGTAGGGCCCGAAAG +
Preference number: 6 (lower is better)
Translates to: SAWPAPALLPRR*CWSGGPGRARK
Trigger: CTTTCGGGCCCTACCAGGGCCGCCAGACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000595176.5
ENST00000595889.1
ENST00000599311.5
ENST00000600737.6
CDS GCA 72 bp CCCTGGCGGGCAATGATGGTGCCAGCTTTGGCGTGGTaGAGCAAGACTCTGCTGTTCAGGAGGGAGGGGTCC +
Preference number: 6 (lower is better)
Translates to: PWRAMMVPALAW*SKTLLFRREGS
Trigger: GGACCCCTCCCTCCTGAACAGCAGAGTCTTGCTGCACCACGCCAAAGCTGGCACCATCATTGCCCGCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000595176.5
ENST00000595889.1
ENST00000599311.5
ENST00000600737.6
CDS GCA 72 bp AAACCTTCTCGTAGAGCTCATGCAGCTTGGCAGGGCTaGGGCGCGAAAAGAGGCGGCGCGGACAGCGCAGGT +
Preference number: 6 (lower is better)
Translates to: KPSRRAHAAWQG*GAKRGGADSAG
Trigger: ACCTGCGCTGTCCGCGCCGCCTCTTTTCGCGCCGCAGCCCTGCCAAGCTGCATGAGCTCTACGAGAAGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS GCA 72 bp GTGTGTGGTGCGGGAGGTGCTTGCGTGTGCGGGTGGTaGGGGCGGCCACTTGCCTGGCAGATTGTTGATGTA +
Preference number: 6 (lower is better)
Translates to: VCGAGGACVCGW*GRPLAWQIVDV
Trigger: TACATCAACAATCTGCCAGGCAAGTGGCCGCCCGCACCACCCGCACACGCAAGCACCTCCCGCACCACACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595352.1
CDS CCA 72 bp GGCGGCCCTGGTAGGGCCCGAAAGGGCAGCCACCAGTaGCCGACTCATCCTCACAGTAGCTGTATTCACAGG +
Preference number: 6 (lower is better)
Translates to: GGPGRARKGSHQ*PTHPHSSCIHR
Trigger: CCTGTGAATACAGCTACTGTGAGGATGAGTCGGCCACTGGTGGCTGCCCTTTCGGGCCCTACCAGGGCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000595176.5
ENST00000595889.1
ENST00000599311.5
ENST00000600737.6
CDS CAA 90 bp GCCGATCTGGTAGCCCGGAGTCGTTTCAGAAGAGTCCTGGGATGCTaGGGGTGGCGTGGGCTTGCAAGGCGCTGCTGGTTTTTGCCGGGG +
Preference number: 6 (lower is better)
Translates to: ADLVARSRFRRVLGC*GWRGLARRCWFLPG
Trigger: CCCCGGCAAAAACCAGCAGCGCCTTGCAAGCCCACGCCACCCCAAGCATCCCAGGACTCTTCTGAAACGACTCCGGGCTACCAGATCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000545201.6
ENST00000596515.5
ENST00000601668.5
CDS CAA 90 bp CGCACCATGATGATCTGCACGACCCGCACCAAGCTCTCCGGGTACTaGGTGAAGACCGCGGAGAATGCTTCCACCGGCAGGCGCAGCACC +
Preference number: 6 (lower is better)
Translates to: RTMMICTTRTKLSGY*VKTAENASTGRRST
Trigger: GGTGCTGCGCCTGCCGGTGGAAGCATTCTCCGCGGTCTTCACCAAGTACCCGGAGAGCTTGGTGCGGGTCGTGCAGATCATCATGGTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594551.1
ENST00000595264.5
ENST00000600737.6
CDS CAA 90 bp AGGCTCACGTCCTGGTCTCCCTGGCGGGCAATGATGGTGCCAGCTTaGGCGTGGTGCAGCAAGACTCTGCTGTTCAGGAGGGAGGGGTCC +
Preference number: 6 (lower is better)
Translates to: RLTSWSPWRAMMVPA*AWCSKTLLFRREGS
Trigger: GGACCCCTCCCTCCTGAACAGCAGAGTCTTGCTGCACCACGCCAAAGCTGGCACCATCATTGCCCGCCAGGGAGACCAGGACGTGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000595176.5
ENST00000595889.1
ENST00000599311.5
ENST00000600737.6
CDS CAA 90 bp CTTCCTCCCGGGTCACTGCCCTGTTTCAGAAGAGTCCTGGGATGCTaGGGGTGGCGTGGGCTTGCAAGGCGCTGCTGGTTTTTGCCGGGG +
Preference number: 6 (lower is better)
Translates to: LPPGSLPCFRRVLGC*GWRGLARRCWFLPG
Trigger: CCCCGGCAAAAACCAGCAGCGCCTTGCAAGCCCACGCCACCCCAAGCATCCCAGGACTCTTCTGAAACAGGGCAGTGACCCGGGAGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450331.7
ENST00000601001.5
CDS CAA 90 bp ATGGCACAGAGCATCACTGGGACTCCGGGACCGATGGTGGCGCCATaGCTGGGAGGCGTAACCAGAGACGCTGGGATTAGTGGGTGGGGA +
Preference number: 6 (lower is better)
Translates to: MAQSITGTPGPMVAP*LGGVTRDAGISGWG
Trigger: TCCCCACCCACTAATCCCAGCGTCTCTGGTTACGCCTCCCAGCAATGGCGCCACCATCGGTCCCGGAGTCCCAGTGATGCTCTGTGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594098.1
ENST00000596515.5
CDS TCA 72 bp AGTGCAGGCTCACGTCCTGGTCTCCCTGGCGGGCAATaGTGGTGCCAGCTTTGGCGTGGTGCAGCAAGACTC +
Preference number: 6 (lower is better)
Translates to: SAGSRPGLPGGQ*WCQLWRGAARL
Trigger: GAGTCTTGCTGCACCACGCCAAAGCTGGCACCATCATTGCCCGCCAGGGAGACCAGGACGTGAGCCTGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000595176.5
ENST00000595889.1
ENST00000599311.5
ENST00000600737.6
CDS TCA 72 bp GGATTGCCACAGTTGCCAGGTTGCTGGCTGGGTTGGTaGGTTCCGAGTGTGGGGGCACACCCAACCCAGAGC +
Preference number: 6 (lower is better)
Translates to: GLPQLPGCWLGW*VPSVGAHPTQS
Trigger: GCTCTGGGTTGGGTGTGCCCCCACACTCGGAACTCACCAACCCAGCCAGCAACCTGGCAACTGTGGCAATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599951.1
ENST00000600737.6
CDS TCA 72 bp GCCACCTTCGCCCCCGAGGAGTTCGTAGCCAGCCCGTaGCTCGATGTCCCCATCATTCCAGTTTGCAGCGGA +
Preference number: 6 (lower is better)
Translates to: ATFAPEEFVASP*LDVPIIPVCSG
Trigger: TCCGCTGCAAACTGGAATGATGGGGACATCGAGTCACGGGCTGGCTACGAACTCCTCGGGGGCGAAGGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414982.7
CDS GCA 72 bp GTCCTCAATCCGCATCAGCTTGGCCAGCTCCTGCTTTaGTGCCTCGAAGATGCTGCTGGTCTGGCGGCCCTG +
Preference number: 6 (lower is better)
Translates to: VLNPHQLGQLLL*CLEDAAGLAAL
Trigger: CAGGGCCGCCAGACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTGAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000595176.5
ENST00000595889.1
ENST00000600737.6
CDS GCA 72 bp GAGGGGTCCTCAATCCGCATCAGCTTGGCCAGCTCCTaGTTTGCTGCCTCGAAGATGCTGCTGGTCTGGCGG +
Preference number: 6 (lower is better)
Translates to: EGSSIRISLASS*FAASKMLLVWR
Trigger: CCGCCAGACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTGAGGACCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000595176.5
ENST00000595889.1
ENST00000600737.6
CDS GCA 72 bp GGCCACCATGGGGACCTCAGCACACACAGGCAGGATTaGCACAGTTGCCAGGTTGCTGGCTGGGTTGGTGAG +
Preference number: 6 (lower is better)
Translates to: GHHGDLSTHRQD*HSCQVAGWVGE
Trigger: CTCACCAACCCAGCCAGCAACCTGGCAACTGTGGCAATCCTGCCTGTGTGTGCTGAGGTCCCCATGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599951.1
ENST00000600737.6
CDS GCA 72 bp CACCTCAATCCGCATCAGCTTGGCCAGCTCCTGCTTTaGTGCCTCGAAGATGCTGCTGGTCTGGCGGCCCTG +
Preference number: 6 (lower is better)
Translates to: HLNPHQLGQLLL*CLEDAAGLAAL
Trigger: CAGGGCCGCCAGACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTGAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599311.5
CDS GCA 72 bp CTGCCCACCTCAATCCGCATCAGCTTGGCCAGCTCCTaGTTTGCTGCCTCGAAGATGCTGCTGGTCTGGCGG +
Preference number: 6 (lower is better)
Translates to: LPTSIRISLASS*FAASKMLLVWR
Trigger: CCGCCAGACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTGAGGTGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599311.5
CDS CCA 72 bp TCTCCCTGGCGGGCAATGATGGTGCCAGCTTTGGCGTaGTGCAGCAAGACTCTGCTGTTCAGGAGGGAGGGG +
Preference number: 6 (lower is better)
Translates to: SPWRAMMVPALA*CSKTLLFRREG
Trigger: CCCCTCCCTCCTGAACAGCAGAGTCTTGCTGCACCACGCCAAAGCTGGCACCATCATTGCCCGCCAGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000595176.5
ENST00000595889.1
ENST00000599311.5
ENST00000600737.6
CDS CCA 72 bp TACTCGCCCACCAGCTCCTTCTTGCCACTGCCTCGCTaGATCACGCTACGCAGCCGCCCATTGAGCACGATG +
Preference number: 6 (lower is better)
Translates to: YSPTSSFLPLPR*ITLRSRPLSTM
Trigger: CATCGTGCTCAATGGGCGGCTGCGTAGCGTGATCCAGCGAGGCAGTGGCAAGAAGGAGCTGGTGGGCGAGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594864.1
ENST00000600737.6
CDS CCA 72 bp CCAAGCGGGAGAAGTCGCTGTGCCGGTCCGCGCGCCTaGAGAAAACCTTCTCGTAGAGCTCATGCAGCTTGG +
Preference number: 6 (lower is better)
Translates to: PSGRSRCAGPRA*RKPSRRAHAAW
Trigger: CCAAGCTGCATGAGCTCTACGAGAAGGTTTTCTCCAGGCGCGCGGACCGGCACAGCGACTTCTCCCGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS CCA 72 bp TTCCTCCCGGGTCACTGCCCTGTTTCAGAAGAGTCCTaGGATGCTTGGGGTGGCGTGGGCTTGCAAGGCGCT +
Preference number: 6 (lower is better)
Translates to: FLPGHCPVSEES*DAWGGVGLQGA
Trigger: AGCGCCTTGCAAGCCCACGCCACCCCAAGCATCCCAGGACTCTTCTGAAACAGGGCAGTGACCCGGGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450331.7
ENST00000601001.5
CDS CCA 72 bp CAGTTTGCAGCGGAGCCTCCATCGGTTGATTCCAGCTaGACGGCCGATCTGGTAGCCCGGAGTCCTGGTACC +
Preference number: 6 (lower is better)
Translates to: QFAAEPPSVDSS*TADLVARSPGT
Trigger: GGTACCAGGACTCCGGGCTACCAGATCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCGCTGCAAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593924.5
ENST00000601001.5
CDS CAA 90 bp ATGGGGACCTCAGCACACACAGGCAGGATTGCCACAGTTGCCAGGTaGCTGGCTGGGTTGGTGAGTTCCGAGTGTGGGGGCACACCCAAC +
Preference number: 6 (lower is better)
Translates to: MGTSAHTGRIATVAR*LAGLVSSECGGTPN
Trigger: GTTGGGTGTGCCCCCACACTCGGAACTCACCAACCCAGCCAGCAACCTGGCAACTGTGGCAATCCTGCCTGTGTGTGCTGAGGTCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599951.1
ENST00000600737.6
CDS TCA 72 bp AGCACCATTCCAGTTTGCAGCGGAGCCTCCATCGGTTaGTTCCAGCTGGACGGCCGATCTGGTAGCCCGGAG +
Preference number: 6 (lower is better)
Translates to: STIPVCSGASIG*FQLDGRSGSPE
Trigger: CTCCGGGCTACCAGATCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCGCTGCAAACTGGAATGGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000221249.10
ENST00000450331.7
ENST00000545201.6
ENST00000593924.5
ENST00000596515.5
ENST00000600942.5
ENST00000601001.5
ENST00000601668.5
CDS TCA 72 bp GATACGGTGTGCATCCTCCTGCTGGGCCAGCCACCCTaGCAGCCGGAACTCTTGGATGCTATCCAGTGCGGA +
Preference number: 6 (lower is better)
Translates to: DTVCILLLGQPP*QPELLDAIQCG
Trigger: TCCGCACTGGATAGCATCCAAGAGTTCCGGCTGTCAGGGTGGCTGGCCCAGCAGGAGGATGCACACCGTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS TCA 72 bp CCCATCATTCCAGTTTGCAGCGGAGCCTCCATCGGTTaGTTCCAGCTGGACGGCCGATCTGGTAGCCCGGAG +
Preference number: 6 (lower is better)
Translates to: PIIPVCSGASIG*FQLDGRSGSPE
Trigger: CTCCGGGCTACCAGATCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCGCTGCAAACTGGAATGATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414982.7
CDS TCA 72 bp CACGGGAGTACTGCCGGGGCATCCGCGGAAGGCGTCTaGTACCCACGTTTCAGAAGAGTCCTGGGATGCTTG +
Preference number: 6 (lower is better)
Translates to: HGSTAGASAEGV*YPRFRRVLGCL
Trigger: CAAGCATCCCAGGACTCTTCTGAAACGTGGGTATCAGACGCCTTCCGCGGATGCCCCGGCAGTACTCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594754.5
CDS GCA 72 bp CTCAATCCGCATCAGCTTGGCCAGCTCCTGCTTTGCTaGCTCGAAGATGCTGCTGGTCTGGCGGCCCTGGTA +
Preference number: 6 (lower is better)
Translates to: LNPHQLGQLLLC*LEDAAGLAALV
Trigger: TACCAGGGCCGCCAGACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000595176.5
ENST00000595889.1
ENST00000599311.5
ENST00000600737.6
CDS GCA 72 bp CTCACGTCCTCAATCCGCATCAGCTTGGCCAGCTCCTaGTTTGCTGCCTCGAAGATGCTGCTGGTCTGGCGG +
Preference number: 6 (lower is better)
Translates to: LTSSIRISLASS*FAASKMLLVWR
Trigger: CCGCCAGACCAGCAGCATCTTCGAGGCAGCAAAGCAGGAGCTGGCCAAGCTGATGCGGATTGAGGACGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545201.6
CDS GCA 72 bp CGGAGTCCTGGGAAATCAAGGAGTCGAAGGAACCCGTaGAAGTCGTCAATCTGGGCCCACCTCTCCCCTGCC +
Preference number: 6 (lower is better)
Translates to: RSPGKSRSRRNP*KSSIWAHLSPA
Trigger: GGCAGGGGAGAGGTGGGCCCAGATTGACGACTTGCACGGGTTCCTTCGACTCCTTGATTTCCCAGGACTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594754.5
CDS CCA 72 bp GTGAAGTTATGGGGGCTCTATGGCACAGAGCATCACTaGGACTCCGGGACCGATGGTGGCGCCATTGCCAGG +
Preference number: 6 (lower is better)
Translates to: VKLWGLYGTEHH*DSGTDGGAIAR
Trigger: CCTGGCAATGGCGCCACCATCGGTCCCGGAGTCCCAGTGATGCTCTGTGCCATAGAGCCCCCATAACTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221249.10
ENST00000601001.5
CDS CCA 72 bp CGGAGTCGTTTCAGAAGAGTCCTGGGATGCTTGGGGTaGCGTGGGCTTGCAAGGCGCTGCTGGTTTTTGCCG +
Preference number: 6 (lower is better)
Translates to: RSRFRRVLGCLG*RGLARRCWFLP
Trigger: CGGCAAAAACCAGCAGCGCCTTGCAAGCCCACGCCACCCCAAGCATCCCAGGACTCTTCTGAAACGACTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000545201.6
ENST00000596515.5
ENST00000601668.5
CDS CCA 72 bp GCATCTTCAGTTTCTTCCTCATGCGTGGCCGGGAGGTaGCGGAGACAGAGGTATCCACGAGGGAGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: ASSVSSSCVAGR*RRQRYPRGRRW
Trigger: CCACCTCCTCCCTCGTGGATACCTCTGTCTCCGCCACCTCCCGGCCACGCATGAGGAAGAAACTGAAGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000593924.5
ENST00000598462.1
ENST00000600737.6
ENST00000600942.5
ENST00000601001.5
ENST00000601668.5
ENST00000602191.5
CDS CCA 72 bp CACAGGCAGGATTGCCACAGTTGCCAGGTTGCTGGCTaGGTTGGTGAGTTCCGAGTGTGGGGGCACACCCAA +
Preference number: 6 (lower is better)
Translates to: HRQDCHSCQVAG*VGEFRVWGHTQ
Trigger: TTGGGTGTGCCCCCACACTCGGAACTCACCAACCCAGCCAGCAACCTGGCAACTGTGGCAATCCTGCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599951.1
ENST00000600737.6
CDS CCA 72 bp CTGCCCTGTTTCAGAAGAGTCCTGGGATGCTTGGGGTaGCGTGGGCTTGCAAGGCGCTGCTGGTTTTTGCCG +
Preference number: 6 (lower is better)
Translates to: LPCFRRVLGCLG*RGLARRCWFLP
Trigger: CGGCAAAAACCAGCAGCGCCTTGCAAGCCCACGCCACCCCAAGCATCCCAGGACTCTTCTGAAACAGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450331.7
ENST00000601001.5
CDS CCA 72 bp CAGTTTGCAGCGGAGCCTCCATCGGTTGATTCCAGCTaGACGGCCGATCTGGTAGCCCGGAGTCTGTCAGCA +
Preference number: 6 (lower is better)
Translates to: QFAAEPPSVDSS*TADLVARSLSA
Trigger: TGCTGACAGACTCCGGGCTACCAGATCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCGCTGCAAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450331.7
CDS CCA 72 bp CGGAAGGCGTCTGATACCCACGTTTCAGAAGAGTCCTaGGATGCTTGGGGTGGCGTGGGCTTGCAAGGCGCT +
Preference number: 6 (lower is better)
Translates to: RKASDTHVSEES*DAWGGVGLQGA
Trigger: AGCGCCTTGCAAGCCCACGCCACCCCAAGCATCCCAGGACTCTTCTGAAACGTGGGTATCAGACGCCTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594754.5
CDS CCA 72 bp CAGTTTGCAGCGGAGCCTCCATCGGTTGATTCCAGCTaGACGGCCGATCTGGTAGCCCGGAGTCCTGGGAAA +
Preference number: 6 (lower is better)
Translates to: QFAAEPPSVDSS*TADLVARSPGK
Trigger: TTTCCCAGGACTCCGGGCTACCAGATCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCGCTGCAAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594754.5
CDS CCA 72 bp GTGAAGTTATGGGGGCTCTATGGCACAGAGCATCACTaGGACTCCGGGACCGATGGTGGCGCCATTGCTGGG +
Preference number: 6 (lower is better)
Translates to: VKLWGLYGTEHH*DSGTDGGAIAG
Trigger: CCCAGCAATGGCGCCACCATCGGTCCCGGAGTCCCAGTGATGCTCTGTGCCATAGAGCCCCCATAACTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594098.1
ENST00000596515.5
CDS CAA 72 bp GTAGCCCGGAGTCGTTTCAGAAGAGTCCTGGGATGCTaGGGGTGGCGTGGGCTTGCAAGGCGCTGCTGGTTT +
Preference number: 6 (lower is better)
Translates to: VARSRFRRVLGC*GWRGLARRCWF
Trigger: AAACCAGCAGCGCCTTGCAAGCCCACGCCACCCCAAGCATCCCAGGACTCTTCTGAAACGACTCCGGGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000545201.6
ENST00000596515.5
ENST00000601668.5
CDS CAA 72 bp ATGATCTGCACGACCCGCACCAAGCTCTCCGGGTACTaGGTGAAGACCGCGGAGAATGCTTCCACCGGCAGG +
Preference number: 6 (lower is better)
Translates to: MICTTRTKLSGY*VKTAENASTGR
Trigger: CCTGCCGGTGGAAGCATTCTCCGCGGTCTTCACCAAGTACCCGGAGAGCTTGGTGCGGGTCGTGCAGATCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594551.1
ENST00000595264.5
ENST00000600737.6
CDS CAA 72 bp TCCTGGTCTCCCTGGCGGGCAATGATGGTGCCAGCTTaGGCGTGGTGCAGCAAGACTCTGCTGTTCAGGAGG +
Preference number: 6 (lower is better)
Translates to: SWSPWRAMMVPA*AWCSKTLLFRR
Trigger: CCTCCTGAACAGCAGAGTCTTGCTGCACCACGCCAAAGCTGGCACCATCATTGCCCGCCAGGGAGACCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000595176.5
ENST00000595889.1
ENST00000599311.5
ENST00000600737.6
CDS CAA 72 bp TCAGCACACACAGGCAGGATTGCCACAGTTGCCAGGTaGCTGGCTGGGTTGGTGAGTTCCGAGTGTGGGGGC +
Preference number: 6 (lower is better)
Translates to: SAHTGRIATVAR*LAGLVSSECGG
Trigger: GCCCCCACACTCGGAACTCACCAACCCAGCCAGCAACCTGGCAACTGTGGCAATCCTGCCTGTGTGTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599951.1
ENST00000600737.6
CDS CAA 72 bp GGGTCACTGCCCTGTTTCAGAAGAGTCCTGGGATGCTaGGGGTGGCGTGGGCTTGCAAGGCGCTGCTGGTTT +
Preference number: 6 (lower is better)
Translates to: GSLPCFRRVLGC*GWRGLARRCWF
Trigger: AAACCAGCAGCGCCTTGCAAGCCCACGCCACCCCAAGCATCCCAGGACTCTTCTGAAACAGGGCAGTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450331.7
ENST00000601001.5
CDS CAA 72 bp AGCATCACTGGGACTCCGGGACCGATGGTGGCGCCATaGCTGGGAGGCGTAACCAGAGACGCTGGGATTAGT +
Preference number: 6 (lower is better)
Translates to: SITGTPGPMVAP*LGGVTRDAGIS
Trigger: ACTAATCCCAGCGTCTCTGGTTACGCCTCCCAGCAATGGCGCCACCATCGGTCCCGGAGTCCCAGTGATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594098.1
ENST00000596515.5
CDS TCA 72 bp CTTACCATTCCAGTTTGCAGCGGAGCCTCCATCGGTTaGTTCCAGCTGGACGGCCGATCTGGTAGCCCGGAG +
Preference number: 6 (lower is better)
Translates to: LTIPVCSGASIG*FQLDGRSGSPE
Trigger: CTCCGGGCTACCAGATCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCGCTGCAAACTGGAATGGTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594754.5
CDS GCA 72 bp CACCGTGTGCGCCGCACTCAGCACCACACTGGGCTGTaGGCGCATGATCTCATAGAAGTCGGACTTGGAGAT +
Preference number: 6 (lower is better)
Translates to: HRVRRTQHHTGL*AHDLIEVGLGD
Trigger: ATCTCCAAGTCCGACTTCTATGAGATCATGCGCGCACAGCCCAGTGTGGTGCTGAGTGCGGCGCACACGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594864.1
ENST00000595176.5
ENST00000599311.5
ENST00000600737.6
CDS CCA 72 bp CAGTTTGCAGCGGAGCCTCCATCGGTTGATTCCAGCTaGACGGCCGATCTGGTAGCCCGGAGTCGTTTCAGA +
Preference number: 6 (lower is better)
Translates to: QFAAEPPSVDSS*TADLVARSRFR
Trigger: TCTGAAACGACTCCGGGCTACCAGATCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCGCTGCAAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000545201.6
ENST00000596515.5
ENST00000601668.5
CDS CCA 72 bp GGGGGCTCCTTCCGCTGCAGCGTGGGCGTCTCTTTCTaGATGCGCAGGATCTTCTTGGCAATGTTGAGCATC +
Preference number: 6 (lower is better)
Translates to: GGSFRCSVGVSF*MRRIFLAMLSI
Trigger: GATGCTCAACATTGCCAAGAAGATCCTGCGCATCCAGAAAGAGACGCCCACGCTGCAGCGGAAGGAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000593924.5
ENST00000598462.1
ENST00000600737.6
ENST00000600942.5
ENST00000601001.5
ENST00000601668.5
ENST00000602191.5
CDS CCA 72 bp GGTCACTGCCCTGTTTCAGAAGAGTCCTGGGATGCTTaGGGTGGCGTGGGCTTGCAAGGCGCTGCTGGTTTT +
Preference number: 6 (lower is better)
Translates to: GHCPVSEESWDA*GGVGLQGAAGF
Trigger: AAAACCAGCAGCGCCTTGCAAGCCCACGCCACCCCAAGCATCCCAGGACTCTTCTGAAACAGGGCAGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450331.7
ENST00000601001.5
CDS CCA 72 bp CAGTTTGCAGCGGAGCCTCCATCGGTTGATTCCAGCTaGACGGCCGATCTGGTAGCCCGGAGTCCTAGATAC +
Preference number: 6 (lower is better)
Translates to: QFAAEPPSVDSS*TADLVARSPRY
Trigger: GTATCTAGGACTCCGGGCTACCAGATCGGCCGTCCAGCTGGAATCAACCGATGGAGGCTCCGCTGCAAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600942.5
CDS CCA 72 bp TACCCACGTTTCAGAAGAGTCCTGGGATGCTTGGGGTaGCGTGGGCTTGCAAGGCGCTGCTGGTTTTTGCCG +
Preference number: 6 (lower is better)
Translates to: YPRFRRVLGCLG*RGLARRCWFLP
Trigger: CGGCAAAAACCAGCAGCGCCTTGCAAGCCCACGCCACCCCAAGCATCCCAGGACTCTTCTGAAACGTGGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594754.5
CDS CCA 72 bp TTCCAGCTGGACGGCCGATCTGGTAGCCCGGAGTCCTaGGAAATCAAGGAGTCGAAGGAACCCGTGCAAGTC +
Preference number: 6 (lower is better)
Translates to: FQLDGRSGSPES*EIKESKEPVQV
Trigger: GACTTGCACGGGTTCCTTCGACTCCTTGATTTCCCAGGACTCCGGGCTACCAGATCGGCCGTCCAGCTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594754.5
CDS CCA 72 bp CCTCTCCGTCAGCACAGCCATCAGAGACATAGCTCGTaGGGGGCTCAATCCGGGACACAATCTCTGCCAAGT +
Preference number: 6 (lower is better)
Translates to: PLRQHSHQRHSS*GAQSGTQSLPS
Trigger: ACTTGGCAGAGATTGTGTCCCGGATTGAGCCCCCCACGAGCTATGTCTCTGATGGCTGTGCTGACGGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000597202.1
ENST00000599947.1
ENST00000600737.6
CDS CCA 72 bp GTGAAGTTATGGGGGCTCTATGGCACAGAGCATCACTaGGACTCCGGGACCGATGGTGGCGCCATTGTTGGA +
Preference number: 6 (lower is better)
Translates to: VKLWGLYGTEHH*DSGTDGGAIVG
Trigger: TCCAACAATGGCGCCACCATCGGTCCCGGAGTCCCAGTGATGCTCTGTGCCATAGAGCCCCCATAACTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000545201.6
ENST00000594754.5
ENST00000601668.5
CDS CCA 72 bp GTACTGGTAGCCCACATCCTGTGGGAAATGAGGGGCTaGGTCCATGTCTGCAACCCTGCTTTGCTTGTCCCC +
Preference number: 6 (lower is better)
Translates to: VLVAHILWEMRG*VHVCNPALLVP
Trigger: GGGGACAAGCAAAGCAGGGTTGCAGACATGGACCCAGCCCCTCATTTCCCACAGGATGTGGGCTACCAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597202.1
CDS CCA 72 bp AGGTGGCGGAGACAGAGGTATCCACGAGGGAGGAGGTaGATTGTGACACCTGGGAGAATGAAGGCGGAGATG +
Preference number: 6 (lower is better)
Translates to: RWRRQRYPRGRR*IVTPGRMKAEM
Trigger: CATCTCCGCCTTCATTCTCCCAGGTGTCACAATCCACCTCCTCCCTCGTGGATACCTCTGTCTCCGCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598462.1
CDS TCA 72 bp CCGCCACAGGGAGCCATCTTTGTGGACTCGCATGGCTaGGGCGGTGATATCTGTGGTCACGTTGAAGTAAGG +
Preference number: 6 (lower is better)
Translates to: PPQGAIFVDSHG*GGDICGHVEVR
Trigger: CCTTACTTCAACGTGACCACAGATATCACCGCCTCAGCCATGCGAGTCCACAAAGATGGCTCCCTGTGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000595352.1
ENST00000600737.6
CDS CCA 72 bp GCGGTTAAAGGCAGACCCAGTGAACATGGAGGTGACTaGGTACGTGAGGTCCAACACAGGTTCCAGCACCGA +
Preference number: 6 (lower is better)
Translates to: AVKGRPSEHGGD*VREVQHRFQHR
Trigger: TCGGTGCTGGAACCTGTGTTGGACCTCACGTACCCAGTCACCTCCATGTTCACTGGGTCTGCCTTTAACCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
ENST00000646984.1
CDS CCA 72 bp GGACACAATCTCTGCCAAGTCAGTGAAGCCAGAGCTTaGGAAGGCAAGCACGTCTGCACGGCGGCTCTCATT +
Preference number: 6 (lower is better)
Translates to: GHNLCQVSEARA*EGKHVCTAALI
Trigger: AATGAGAGCCGCCGTGCAGACGTGCTTGCCTTCCCAAGCTCTGGCTTCACTGACTTGGCAGAGATTGTGTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000597202.1
ENST00000600737.6
CDS CCA 72 bp TCTGATACCCACGTTTCAGAAGAGTCCTGGGATGCTTaGGGTGGCGTGGGCTTGCAAGGCGCTGCTGGTTTT +
Preference number: 6 (lower is better)
Translates to: SDTHVSEESWDA*GGVGLQGAAGF
Trigger: AAAACCAGCAGCGCCTTGCAAGCCCACGCCACCCCAAGCATCCCAGGACTCTTCTGAAACGTGGGTATCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594754.5
CDS CCA 72 bp CTGGGAGGCGTAACCAGAGACGCTGGGATTAGTGGGTaGGGATGCGGGGTCACTGGAAAGTTACTGAGATTC +
Preference number: 6 (lower is better)
Translates to: LGGVTRDAGISG*GCGVTGKLLRF
Trigger: GAATCTCAGTAACTTTCCAGTGACCCCGCATCCCCACCCACTAATCCCAGCGTCTCTGGTTACGCCTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594098.1
ENST00000596515.5
CDS CAA 72 bp CGGGACTGGATTTCAGCCATGTCTGGAACCTTTACCTaGTCAGCCCAGGGATTCAGCCGCTTCCACAGCAGC +
Preference number: 6 (lower is better)
Translates to: RDWISAMSGTFT*SAQGFSRFHSS
Trigger: GCTGCTGTGGAAGCGGCTGAATCCCTGGGCTGACAAGGTAAAGGTTCCAGACATGGCTGAAATCCAGTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
CDS CCA 72 bp TGCTGCAAATTCCCTAGAATTTTCTGGCTCAGTAGGTaGATAAGGCGGGTCACGACCTGCGGGTACCGGCGT +
Preference number: 6 (lower is better)
Translates to: CCKFPRIFWLSR*IRRVTTCGYRR
Trigger: ACGCCGGTACCCGCAGGTCGTGACCCGCCTTATCCACCTACTGAGCCAGAAAATTCTAGGGAATTTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000599951.1
ENST00000600737.6
CDS CAA 90 bp CCTGGGAGAATGAAGGCGGAGATGGGTGAATTGCTAATTCAGACCTaGGAGAAGAGGCAGACGGATCCAGGGGGTCTCCATCAAGGAAGG +
Preference number: 6 (lower is better)
Translates to: PGRMKAEMGELLIQT*EKRQTDPGGLHQGR
Trigger: CCTTCCTTGATGGAGACCCCCTGGATCCGTCTGCCTCTTCTCCAAGGTCTGAATTAGCAATTCACCCATCTCCGCCTTCATTCTCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598462.1
CDS TCA 72 bp ACGCCACACACAGCCATCTTTGTGGACTCGCATGGCTaGGGCGGTGATATCTGTGGTCACGTTGAAGTAAGG +
Preference number: 6 (lower is better)
Translates to: TPHTAIFVDSHG*GGDICGHVEVR
Trigger: CCTTACTTCAACGTGACCACAGATATCACCGCCTCAGCCATGCGAGTCCACAAAGATGGCTGTGTGTGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646984.1
CDS GCA 72 bp ACACCCAACCCAGAGCCTGGGAAGGGTCCTTGCAGCTaGTGCAAATTCCCTAGAATTTTCTGGCTCAGTAGG +
Preference number: 6 (lower is better)
Translates to: TPNPEPGKGPCS*CKFPRIFWLSR
Trigger: CCTACTGAGCCAGAAAATTCTAGGGAATTTGCAGCAGCTGCAAGGACCCTTCCCAGGCTCTGGGTTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000545201.6
ENST00000599951.1
ENST00000600737.6
CDS CCA 72 bp ATTACAATACTACTGCTGGGAAAACCAGGAGGTGGGTaGGCACATTCCTGGGGTGCTTATGAGAGCGGGCCT +
Preference number: 6 (lower is better)
Translates to: ITILLLGKPGGG*AHSWGAYESGP
Trigger: AGGCCCGCTCTCATAAGCACCCCAGGAATGTGCCCACCCACCTCCTGGTTTTCCCAGCAGTAGTATTGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594098.1
ENST00000596515.5
CDS CAA 90 bp AGGTGGATTGTGACACCTGGGAGAATGAAGGCGGAGATGGGTGAATaGCTAATTCAGACCTTGGAGAAGAGGCAGACGGATCCAGGGGGT +
Preference number: 6 (lower is better)
Translates to: RWIVTPGRMKAEMGE*LIQTLEKRQTDPGG
Trigger: ACCCCCTGGATCCGTCTGCCTCTTCTCCAAGGTCTGAATTAGCAATTCACCCATCTCCGCCTTCATTCTCCCAGGTGTCACAATCCACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598462.1
CDS CCA 72 bp TTACTATCACGTAGTAGTGAAGTTATGGGGGCTCTATaGCACAGAGCATCACTGGGACTCCGGGACCGATGG +
Preference number: 6 (lower is better)
Translates to: LLSRSSEVMGAL*HRASLGLRDRW
Trigger: CCATCGGTCCCGGAGTCCCAGTGATGCTCTGTGCCATAGAGCCCCCATAACTTCACTACTACGTGATAGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594098.1
ENST00000594754.5
ENST00000596515.5
ENST00000601001.5
ENST00000601668.5
CDS CCA 72 bp CACAGGTCCTCAATCTGCTTATCCTGGAAGACCCGATaGATGCTGCGGTTAAAGGCAGACCCAGTGAACATG +
Preference number: 6 (lower is better)
Translates to: HRSSICLSWKTR*MLRLKADPVNM
Trigger: CATGTTCACTGGGTCTGCCTTTAACCGCAGCATCCATCGGGTCTTCCAGGATAAGCAGATTGAGGACCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000600737.6
ENST00000646984.1
CDS CCA 72 bp GGACACAATCTCTGCCAAGTCAGTGAAGCCAGAGCTTaGGAAGGCAAGCACATAGATCTGGTCGAACTTCCC +
Preference number: 6 (lower is better)
Translates to: GHNLCQVSEARA*EGKHIDLVELP
Trigger: GGGAAGTTCGACCAGATCTATGTGCTTGCCTTCCCAAGCTCTGGCTTCACTGACTTGGCAGAGATTGTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599947.1
CDS CAA 72 bp ATGAAGGCGGAGATGGGTGAATTGCTAATTCAGACCTaGGAGAAGAGGCAGACGGATCCAGGGGGTCTCCAT +
Preference number: 6 (lower is better)
Translates to: MKAEMGELLIQT*EKRQTDPGGLH
Trigger: ATGGAGACCCCCTGGATCCGTCTGCCTCTTCTCCAAGGTCTGAATTAGCAATTCACCCATCTCCGCCTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598462.1
CDS TCA 72 bp TCTCTTTCTGGATGCGCAGGATCTTCTTGGCAATGTTaGGCATCTTCAGTTTCTTCCTCATGCGTGGCCGGG +
Preference number: 6 (lower is better)
Translates to: SLSGCAGSSWQC*ASSVSSSCVAG
Trigger: CCCGGCCACGCATGAGGAAGAAACTGAAGATGCTCAACATTGCCAAGAAGATCCTGCGCATCCAGAAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000593924.5
ENST00000598462.1
ENST00000600737.6
ENST00000600942.5
ENST00000601001.5
ENST00000601668.5
ENST00000602191.5
CDS CCA 72 bp TTGCCGGGGATTTACTATCACGTAGTAGTGAAGTTATaGGGGCTCTATGGCACAGAGCATCACTGGGACTCC +
Preference number: 6 (lower is better)
Translates to: LPGIYYHVVVKL*GLYGTEHHWDS
Trigger: GGAGTCCCAGTGATGCTCTGTGCCATAGAGCCCCCATAACTTCACTACTACGTGATAGTAAATCCCCGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000594754.5
ENST00000596515.5
ENST00000601001.5
ENST00000601668.5
CDS CAA 72 bp GTCTCTTTCTGGATGCGCAGGATCTTCTTGGCAATGTaGAGCATCTTCAGTTTCTTCCTCATGCGTGGCCGG +
Preference number: 6 (lower is better)
Translates to: VSFWMRRIFLAM*SIFSFFLMRGR
Trigger: CCGGCCACGCATGAGGAAGAAACTGAAGATGCTCAACATTGCCAAGAAGATCCTGCGCATCCAGAAAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000221249.10
ENST00000414982.7
ENST00000450331.7
ENST00000545201.6
ENST00000593924.5
ENST00000598462.1
ENST00000600737.6
ENST00000600942.5
ENST00000601001.5
ENST00000601668.5
ENST00000602191.5
CDS CAA 72 bp GTGACACCTGGGAGAATGAAGGCGGAGATGGGTGAATaGCTAATTCAGACCTTGGAGAAGAGGCAGACGGAT +
Preference number: 6 (lower is better)
Translates to: VTPGRMKAEMGE*LIQTLEKRQTD
Trigger: ATCCGTCTGCCTCTTCTCCAAGGTCTGAATTAGCAATTCACCCATCTCCGCCTTCATTCTCCCAGGTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598462.1