Pregenerated sensors for PNO1 (Homo sapiens)
Ensembl gene IDs: ENSG00000115946Ensembl transcript IDs: ENST00000263657.7, ENST00000430742.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CACAAAATCAGCTGCTTTTGTCAGAGCACTAACATCCTTGGTTTCTTTACAAGTCTTCCCTGGGATTCCTaGCTTAATCTTCTTAGTTAT | + |
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Preference number: 2 (lower is better) Translates to: HKISCFCQSTNILGFFTSLPWDS*LNLLSY Trigger: ATAACTAAGAAGATTAAGTCAGGAATCCCAGGGAAG...ACTTGTAAAGAAACCAAGGATGTTAGTGCTCTGACAAAAGCAGCTGATTTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS-3UTR GCA 90 bp | TTACAAGTCTTCTGTCCATCCCTTCAATGCCCAATGTCCTCTTCTCTTCTCTCTCCTCCTCTGTGTCCATaGGGCCCGCATCCCCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LQVFCPSLQCPMSSSLLSPPLCP*GPHPRP Trigger: AGGGCGGGGATGCGGGCCGCATGGACACAGAGGAGG...AGAGAGAAGAGAAGAGGACATTGGGCATTGAAGGGATGGACAGAAGACTTGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS-3UTR GCA 90 bp | CCTTGGTTTCTTTACAAGTCTTCTGTCCATCCCTTCAATGCCCAATGTCCTCTTCCCGCCCTCTCCTGCTaGGGACAGCTGTTCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: PWFLYKSSVHPFNAQCPLPALSC*GQLFSL Trigger: CAGGCTGAACAGCTGTCCGCAGCAGGAGAGGGCGGG...AAGAGGACATTGGGCATTGAAGGGATGGACAGAAGACTTGTAAAGAAACCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS-3UTR CCA 90 bp | CCTTGGTTTCTTTACAAGTCTTCTGTCCATCCCTTCAATGCCCAATGTCCTCTTGTCCCCACAGAGGGGTaGGAAGACGGGCCTCTTCGC | + |
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Preference number: 4 (lower is better) Translates to: PWFLYKSSVHPFNAQCPLVPTEG*EDGPLR Trigger: GCGAAGAGGCCCGTCTTCCCACCCCTCTGTGGGGAC...AAGAGGACATTGGGCATTGAAGGGATGGACAGAAGACTTGTAAAGAAACCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS-3UTR GCA 90 bp | CTTCTCTTCTCTCTCAAGGCAGTCTTCCCTGGGATTCCTGACTTAATCTTCTTAGGTAAAGCCCTCCTCTaGCCTGGCGCTCTGCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: LLFSLKAVFPGIPDLIFLGKALL*PGALRF Trigger: GAAACGCAGAGCGCCAGGGCAGAGGAGGGCTTTACC...TAAGAAGATTAAGTCAGGAATCCCAGGGAAGACTGCCTTGAGAGAGAAGAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS-3UTR CCA 90 bp | TTCTTTACAAGTCTTCTGTCCATCCCTTCAATGCCCAATGTCCTCTTCTCTTCTCCCTTGCGGGTGACCTaGGTAAAGCCCTCCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: FFTSLLSIPSMPNVLFSSPLRVT*VKPSSA Trigger: GGCAGAGGAGGGCTTTACCCAGGTCACCCGCAAGGG...AGAAGAGAAGAGGACATTGGGCATTGAAGGGATGGACAGAAGACTTGTAAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS-3UTR CCA 90 bp | AGCACTAACATCCTTGGTTTCTTTACAAGTCTTCTGTCCATCCCTTCAATGCCCAGCCCTCCTCTGCCCTaGCGCTCTGCGTTTCCATTT | + |
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Preference number: 4 (lower is better) Translates to: STNILGFFTSLLSIPSMPSPPLP*RSAFPF Trigger: AAATGGAAACGCAGAGCGCCAGGGCAGAGGAGGGCT...GGGCATTGAAGGGATGGACAGAAGACTTGTAAAGAAACCAAGGATGTTAGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS-3UTR GCA 90 bp | CACAAAATCAGCTGCTTTTGTCAGAGCACTAACATCCTTGGTTTCTTTACAAGTATCCCCGCCCTCTCCTaGTGCGGACAGCTGTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: HKISCFCQSTNILGFFTSIPALS*CGQLFS Trigger: GCTGAACAGCTGTCCGCAGCAGGAGAGGGCGGGGAT...ACTTGTAAAGAAACCAAGGATGTTAGTGCTCTGACAAAAGCAGCTGATTTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS-3UTR CCA 90 bp | AAAATCAGCTGCTTTTGTCAGAGCACTAACATCCTTGGTTTCTTTACAAGTCTTGCCTCTTCGCCGGCCTaGCCTCCTCTGTGTCCATGC | + |
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Preference number: 4 (lower is better) Translates to: KISCFCQSTNILGFFTSLASSPA*PPLCPC Trigger: GCATGGACACAGAGGAGGCCAGGCCGGCGAAGAGGC...AAGACTTGTAAAGAAACCAAGGATGTTAGTGCTCTGACAAAAGCAGCTGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS-3UTR GCA 90 bp | GCTTTTGTCAGAGCACTAACATCCTTGGTTTCTTTACAAGTCTTCTGTCCATCCTCTGCCCTGGCGCTCTaGGTTTCCATTTCGGATTCC | + |
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Preference number: 4 (lower is better) Translates to: AFVRALTSLVSLQVFCPSSALAL*VSISDS Trigger: GGAATCCGAAATGGAAACGCAGAGCGCCAGGGCAGA...GGATGGACAGAAGACTTGTAAAGAAACCAAGGATGTTAGTGCTCTGACAAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS-3UTR GCA 90 bp | CTTTACAAGTCTTCTGTCCATCCCTTCAATGCCCAATGTCCTCTTCTCTTCTCTCCAGGCCTAACTACCTaGATGCACCTGATTTCTACA | + |
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Preference number: 4 (lower is better) Translates to: LYKSSVHPFNAQCPLLFSPGLTT*MHLIST Trigger: TGTAGAAATCAGGTGCATGCAGGTAGTTAGGCCTGG...AGAGAAGAGAAGAGGACATTGGGCATTGAAGGGATGGACAGAAGACTTGTAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS-3UTR TCA 90 bp | AGAGCACTAACATCCTTGGTTTCTTTACAAGTCTTCTGTCCATCCCTTCAATGCAGTGCATCCTCCACCTaGAAGCCGAGAATAAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: RALTSLVSLQVFCPSLQCSASST*KPRIKA Trigger: AGCTTTTATTCTCGGCTTTCAGGTGGAGGATGCACT...GCATTGAAGGGATGGACAGAAGACTTGTAAAGAAACCAAGGATGTTAGTGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS-3UTR GCA 90 bp | CTTCTCTTCTCTCTCAAGGCAGTCTTCCCTGGGATTCCTGACTTAATCTTCTTATGTCCATCCCTTCAATaGCCAATGTCCTCTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: LLFSLKAVFPGIPDLIFLCPSLQ*PMSSSL Trigger: AAGAGAAGAGGACATTGGGCATTGAAGGGATGGACA...TAAGAAGATTAAGTCAGGAATCCCAGGGAAGACTGCCTTGAGAGAGAAGAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS-3UTR TCA 90 bp | AGCACTAACATCCTTGGTTTCTTTACAAGTCTTCTGTCCATCCCTTCAATGCCCCTTCCCTGGGATTCCTaGCTTAATCTTCTTAGTTAT | + |
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Preference number: 4 (lower is better) Translates to: STNILGFFTSLLSIPSMPLPWDS*LNLLSY Trigger: ATAACTAAGAAGATTAAGTCAGGAATCCCAGGGAAG...GGGCATTGAAGGGATGGACAGAAGACTTGTAAAGAAACCAAGGATGTTAGTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS-3UTR CCA 90 bp | CTTTACAAGTCTTCTGTCCATCCCTTCAATGCCCAATGTCCTCTTCTCTTCTCTTGTGTATCTGTTAGCTaGGACTGGAATTTTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LYKSSVHPFNAQCPLLFSCVSVS*DWNFPC Trigger: ACAAGGAAAATTCCAGTCCCAGCTAACAGATACACA...AGAGAAGAGAAGAGGACATTGGGCATTGAAGGGATGGACAGAAGACTTGTAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS-3UTR TCA 90 bp | TTGGTTTCTTTACAAGTCTTCTGTCCATCCCTTCAATGCCCAATGTCCTCTTCTAAGTTAAAGCGTATCTaGAGTCCCAAATGTTCCACA | + |
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Preference number: 4 (lower is better) Translates to: LVSLQVFCPSLQCPMSSSKLKRI*SPKCST Trigger: TGTGGAACATTTGGGACTTCAGATACGCTTTAACTT...AGAAGAGGACATTGGGCATTGAAGGGATGGACAGAAGACTTGTAAAGAAACCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| 3UTR CAA 72 bp | ACAAAATCAGCTGCTTTTGTCAGAGCACTAACATCCTaGGTTTCTTTACAAGTCTTCTGTCCATCCCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: TKSAAFVRALTS*VSLQVFCPSLQ Trigger: TTGAAGGGATGGACAGAAGACTTGTAAAGAAACCAAGGATGTTAGTGCTCTGACAAAAGCAGCTGATTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS-3UTR GCA 90 bp | ATCAGCTGCTTTTGTCAGAGCACTAACATCCTTGGTTTCTTTACAAGTCTTCTGTTTCACAAAATCAGCTaGTTTTGTCAGAGCACTAAC | + |
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Preference number: 4 (lower is better) Translates to: ISCFCQSTNILGFFTSLLFHKIS*FCQSTN Trigger: GTTAGTGCTCTGACAAAAGCAGCTGATTTTGTGAAA...CAGAAGACTTGTAAAGAAACCAAGGATGTTAGTGCTCTGACAAAAGCAGCTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS-3UTR CCA 90 bp | CACAAAATCAGCTGCTTTTGTCAGAGCACTAACATCCTTGGTTTCTTTACAAGTTCTGTTAGCTGGGACTaGAATTTTCCTTGTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: HKISCFCQSTNILGFFTSSVSWD*NFPCFF Trigger: GAAGAAACAAGGAAAATTCCAGTCCCAGCTAACAGA...ACTTGTAAAGAAACCAAGGATGTTAGTGCTCTGACAAAAGCAGCTGATTTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS GCA 90 bp | GGCCTCCTCTGTGTCCATGCGGCCCGCATCCCCGCCCTCTCCTGCTaGGGACAGCTGTTCAGCCTGTCGTTTCTTCGCCCGTCGGCCACC | + |
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Preference number: 5 (lower is better) Translates to: GLLCVHAARIPALSC*GQLFSLSFLRPSAT Trigger: GGTGGCCGACGGGCGAAGAAACGACAGGCTGAACAGCTGTCCGCAGCAGGAGAGGGCGGGGATGCGGGCCGCATGGACACAGAGGAGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263657.7 ENST00000430742.1 |
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| CDS GCA 90 bp | CCTGGCCTCCTCTGTGTCCATGCGGCCCGCATCCCCGCCCTCTCCTaGTGCGGACAGCTGTTCAGCCTGTCGTTTCTTCGCCCGTCGGCC | + |
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Preference number: 5 (lower is better) Translates to: PGLLCVHAARIPALS*CGQLFSLSFLRPSA Trigger: GGCCGACGGGCGAAGAAACGACAGGCTGAACAGCTGTCCGCAGCAGGAGAGGGCGGGGATGCGGGCCGCATGGACACAGAGGAGGCCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263657.7 ENST00000430742.1 |
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| CDS GCA 90 bp | CGCCCGTCGGCCACCCTTGCGGGTGACCTGGGTAAAGCCCTCCTCTaGCCTGGCGCTCTGCGTTTCCATTTCGGATTCCATCCCCGGAAA | + |
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Preference number: 5 (lower is better) Translates to: RPSATLAGDLGKALL*PGALRFHFGFHPRK Trigger: TTTCCGGGGATGGAATCCGAAATGGAAACGCAGAGCGCCAGGGCAGAGGAGGGCTTTACCCAGGTCACCCGCAAGGGTGGCCGACGGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263657.7 ENST00000430742.1 |
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| CDS CCA 90 bp | TCAGCCTGTCGTTTCTTCGCCCGTCGGCCACCCTTGCGGGTGACCTaGGTAAAGCCCTCCTCTGCCCTGGCGCTCTGCGTTTCCATTTCG | + |
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Preference number: 5 (lower is better) Translates to: SACRFFARRPPLRVT*VKPSSALALCVSIS Trigger: CGAAATGGAAACGCAGAGCGCCAGGGCAGAGGAGGGCTTTACCCAGGTCACCCGCAAGGGTGGCCGACGGGCGAAGAAACGACAGGCTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263657.7 ENST00000430742.1 |
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| CDS CCA 90 bp | CCTTGTTTCTTCTTTCCCACTCAGGAGCCCGTCCCCACAGAGGGGTaGGAAGACGGGCCTCTTCGCCGGCCTGGCCTCCTCTGTGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: PCFFFPTQEPVPTEG*EDGPLRRPGLLCVH Trigger: ATGGACACAGAGGAGGCCAGGCCGGCGAAGAGGCCCGTCTTCCCACCCCTCTGTGGGGACGGGCTCCTGAGTGGGAAAGAAGAAACAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263657.7 ENST00000430742.1 |
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| CDS GCA 90 bp | CCCTTGCGGGTGACCTGGGTAAAGCCCTCCTCTGCCCTGGCGCTCTaGGTTTCCATTTCGGATTCCATCCCCGGAAATCTTAAAGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: PLRVTWVKPSSALAL*VSISDSIPGNLKAL Trigger: CAGCGCTTTAAGATTTCCGGGGATGGAATCCGAAATGGAAACGCAGAGCGCCAGGGCAGAGGAGGGCTTTACCCAGGTCACCCGCAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263657.7 |
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| CDS CCA 90 bp | CTTCATCCAGTTTTCTTTCAATGGTGTGTATCTGTTAGCTGGGACTaGAATTTTCCTTGTTTCTTCTTTCCCACTCAGGAGCCCGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: LHPVFFQWCVSVSWD*NFPCFFFPTQEPVP Trigger: GGGGACGGGCTCCTGAGTGGGAAAGAAGAAACAAGGAAAATTCCAGTCCCAGCTAACAGATACACACCATTGAAAGAAAACTGGATGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263657.7 ENST00000430742.1 |
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| CDS-3UTR CAA 90 bp | CATCCTTGGTTTCTTTACAAGTCTTCTGTCCATCCCTTCAATGCCCAATGTCCTGGACTGGAATTTTCCTaGTTTCTTCTTTCCCACTCA | + |
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Preference number: 5 (lower is better) Translates to: HPWFLYKSSVHPFNAQCPGLEFS*FLLSHS Trigger: TGAGTGGGAAAGAAGAAACAAGGAAAATTCCAGTCC...AGGACATTGGGCATTGAAGGGATGGACAGAAGACTTGTAAAGAAACCAAGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS TCA 90 bp | AGCTCCAGGCCTAACTACCTGCATGCACCTGATTTCTACATTCCTTaGTTTCAAGTTAAAGCGTATCTGAAGTCCCAAATGTTCCACAAT | + |
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Preference number: 5 (lower is better) Translates to: SSRPNYLHAPDFYIP*FQVKAYLKSQMFHN Trigger: ATTGTGGAACATTTGGGACTTCAGATACGCTTTAACTTGAAATCAAGGAATGTAGAAATCAGGTGCATGCAGGTAGTTAGGCCTGGAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS-3UTR CAA 90 bp | TTCTTTACAAGTCTTCTGTCCATCCCTTCAATGCCCAATGTCCTCTTCTCTTCTAGAGCACTAACATCCTaGGTTTCTTTACAAGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: FFTSLLSIPSMPNVLFSSRALTS*VSLQVF Trigger: GAAGACTTGTAAAGAAACCAAGGATGTTAGTGCTCT...AGAAGAGAAGAGGACATTGGGCATTGAAGGGATGGACAGAAGACTTGTAAAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS GCA 90 bp | TATATGCTGATGTTTCTTAAACCAACAGCTCCAGGCCTAACTACCTaGATGCACCTGATTTCTACATTCCTTGATTTCAAGTTAAAGCGT | + |
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Preference number: 5 (lower is better) Translates to: YMLMFLKPTAPGLTT*MHLISTFLDFKLKR Trigger: ACGCTTTAACTTGAAATCAAGGAATGTAGAAATCAGGTGCATGCAGGTAGTTAGGCCTGGAGCTGTTGGTTTAAGAAACATCAGCATATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS TCA 90 bp | CAAGTCCTGATTTCTACATTCCTTGATTTCAAGTTAAAGCGTATCTaGAGTCCCAAATGTTCCACAATAGGAGTAAATATCTTCATCCAG | + |
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Preference number: 5 (lower is better) Translates to: QVLISTFLDFKLKRI*SPKCSTIGVNIFIQ Trigger: CTGGATGAAGATATTTACTCCTATTGTGGAACATTTGGGACTTCAGATACGCTTTAACTTGAAATCAAGGAATGTAGAAATCAGGACTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263657.7 |
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| CDS TCA 90 bp | ATGCACCTGATTTCTACATTCCTTGATTTCAAGTTAAAGCGTATCTaGAGTCCCAAATGTTCCACAATAGGAGTAAATATCTTCATCCAG | + |
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Preference number: 5 (lower is better) Translates to: MHLISTFLDFKLKRI*SPKCSTIGVNIFIQ Trigger: CTGGATGAAGATATTTACTCCTATTGTGGAACATTTGGGACTTCAGATACGCTTTAACTTGAAATCAAGGAATGTAGAAATCAGGTGCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS CCA 72 bp | TTCTTTCCCACTCAGGAGCCCGTCCCCACAGAGGGGTaGGAAGACGGGCCTCTTCGCCGGCCTGGCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FFPTQEPVPTEG*EDGPLRRPGLL Trigger: GAGGAGGCCAGGCCGGCGAAGAGGCCCGTCTTCCCACCCCTCTGTGGGGACGGGCTCCTGAGTGGGAAAGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263657.7 ENST00000430742.1 |
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| CDS CAA 90 bp | GCGGACAGCTGTTCAGCCTGTCGTTTCTTCGCCCGTCGGCCACCCTaGCGGGTGACCTGGGTAAAGCCCTCCTCTGCCCTGGCGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: ADSCSACRFFARRPP*RVTWVKPSSALALC Trigger: GCAGAGCGCCAGGGCAGAGGAGGGCTTTACCCAGGTCACCCGCAAGGGTGGCCGACGGGCGAAGAAACGACAGGCTGAACAGCTGTCCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263657.7 ENST00000430742.1 |
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| CDS GCA 72 bp | TGTGTCCATGCGGCCCGCATCCCCGCCCTCTCCTGCTaGGGACAGCTGTTCAGCCTGTCGTTTCTTCGCCCG | + |
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Preference number: 6 (lower is better) Translates to: CVHAARIPALSC*GQLFSLSFLRP Trigger: CGGGCGAAGAAACGACAGGCTGAACAGCTGTCCGCAGCAGGAGAGGGCGGGGATGCGGGCCGCATGGACACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263657.7 ENST00000430742.1 |
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| CDS CCA 72 bp | CGTTTCTTCGCCCGTCGGCCACCCTTGCGGGTGACCTaGGTAAAGCCCTCCTCTGCCCTGGCGCTCTGCGTT | + |
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Preference number: 6 (lower is better) Translates to: RFFARRPPLRVT*VKPSSALALCV Trigger: AACGCAGAGCGCCAGGGCAGAGGAGGGCTTTACCCAGGTCACCCGCAAGGGTGGCCGACGGGCGAAGAAACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263657.7 ENST00000430742.1 |
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| CDS GCA 72 bp | CTCTGTGTCCATGCGGCCCGCATCCCCGCCCTCTCCTaGTGCGGACAGCTGTTCAGCCTGTCGTTTCTTCGC | + |
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Preference number: 6 (lower is better) Translates to: LCVHAARIPALS*CGQLFSLSFLR Trigger: GCGAAGAAACGACAGGCTGAACAGCTGTCCGCAGCAGGAGAGGGCGGGGATGCGGGCCGCATGGACACAGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263657.7 ENST00000430742.1 |
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| CDS CAA 72 bp | TGTTCAGCCTGTCGTTTCTTCGCCCGTCGGCCACCCTaGCGGGTGACCTGGGTAAAGCCCTCCTCTGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: CSACRFFARRPP*RVTWVKPSSAL Trigger: CAGGGCAGAGGAGGGCTTTACCCAGGTCACCCGCAAGGGTGGCCGACGGGCGAAGAAACGACAGGCTGAACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263657.7 ENST00000430742.1 |
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| CDS GCA 72 bp | GTGACCTGGGTAAAGCCCTCCTCTGCCCTGGCGCTCTaGGTTTCCATTTCGGATTCCATCCCCGGAAATCTT | + |
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Preference number: 6 (lower is better) Translates to: VTWVKPSSALAL*VSISDSIPGNL Trigger: AAGATTTCCGGGGATGGAATCCGAAATGGAAACGCAGAGCGCCAGGGCAGAGGAGGGCTTTACCCAGGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263657.7 ENST00000430742.1 |
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| CDS CAA 90 bp | CTTGTCCGTGTCACATTCTCTATGGTGAATTTGGTTTTTCCTCCTTaGCCAGCGATTCTTCCTATTGCCCTGGATAGATGGTCTCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LVRVTFSMVNLVFPP*PAILPIALDRWSPF Trigger: AAAGGGAGACCATCTATCCAGGGCAATAGGAAGAATCGCTGGCAAAGGAGGAAAAACCAAATTCACCATAGAGAATGTGACACGGACAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000263657.7 |
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| CDS CCA 72 bp | CCTTTGCCAGCGATTCTTCCTATTGCCCTGGATAGATaGTCTCCCTTTAGGGGTTTAACATCTGTAATTTCA | + |
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Preference number: 6 (lower is better) Translates to: PLPAILPIALDR*SPFRGLTSVIS Trigger: TGAAATTACAGATGTTAAACCCCTAAAGGGAGACCATCTATCCAGGGCAATAGGAAGAATCGCTGGCAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263657.7 |
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| CDS CAA 72 bp | GTCACATTCTCTATGGTGAATTTGGTTTTTCCTCCTTaGCCAGCGATTCTTCCTATTGCCCTGGATAGATGG | + |
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Preference number: 6 (lower is better) Translates to: VTFSMVNLVFPP*PAILPIALDRW Trigger: CCATCTATCCAGGGCAATAGGAAGAATCGCTGGCAAAGGAGGAAAAACCAAATTCACCATAGAGAATGTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000263657.7 |
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| CDS GCA 72 bp | ATGTTTCTTAAACCAACAGCTCCAGGCCTAACTACCTaGATGCACCTGATTTCTACATTCCTTGATTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: MFLKPTAPGLTT*MHLISTFLDFK Trigger: CTTGAAATCAAGGAATGTAGAAATCAGGTGCATGCAGGTAGTTAGGCCTGGAGCTGTTGGTTTAAGAAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430742.1 |
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| CDS CCA 72 bp | GTTTTCTTTCAATGGTGTGTATCTGTTAGCTGGGACTaGAATTTTCCTTGTTTCTTCTTTCCCACTCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: VFFQWCVSVSWD*NFPCFFFPTQE Trigger: CTCCTGAGTGGGAAAGAAGAAACAAGGAAAATTCCAGTCCCAGCTAACAGATACACACCATTGAAAGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263657.7 ENST00000430742.1 |
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| CDS CAA 72 bp | ACAAAATCAGCTGCTTTTGTCAGAGCACTAACATCCTaGGTTTCTTTACAAGTCCTGATTTCTACATTCCTT | + |
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Preference number: 6 (lower is better) Translates to: TKSAAFVRALTS*VSLQVLISTFL Trigger: AAGGAATGTAGAAATCAGGACTTGTAAAGAAACCAAGGATGTTAGTGCTCTGACAAAAGCAGCTGATTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263657.7 |
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