Pregenerated sensors for PNMA8C (Homo sapiens)
Ensembl gene IDs: ENSG00000277531Ensembl transcript IDs: ENST00000617053.2, ENST00000617053.3
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGGTCTCCATAGCAACGGTCGGACGCGCTGCTAGGTTCTGGCTCTaGCTGCGCCTGCGCGGCTGGTCCCGCGGGGTCTCCCGAGTAGCG | + |
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Preference number: 1 (lower is better) Translates to: VVSIATVGRAARFWL*LRLRGWSRGVSRVA Trigger: CGCTACTCGGGAGACCCCGCGGGACCAGCCGCGCAGGCGCAGTCAGAGCCAGAACCTAGCAGCGCGTCCGACCGTTGCTATGGAGACCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR CCA 90 bp | GAGGCTGTCCCCAGAATCAGGCCGTGGGTGACAGCCGAAGGAGGATaGCGGCCCTTCTCCCGAGTAGGGATCTCCCTGACACGTTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: EAVPRIRPWVTAEGG*RPFSRVGISLTRSS Trigger: GGAGGAACGTGTCAGGGAGATCCCTACTCGGGAGAAGGGCCGCCATCCTCCTTCGGCTGTCACCCACGGCCTGATTCTGGGGACAGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR CCA 90 bp | GGACCGTTTCCACCTCCTCCATTTTCTGCAAAGGGCGCAGGCGCCTaGGGTCAGCCTGTGGTCTCCATAGCAACGGTCGGACGCGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: GPFPPPPFSAKGAGA*GQPVVSIATVGRAA Trigger: AGCAGCGCGTCCGACCGTTGCTATGGAGACCACAGGCTGACCCCAGGCGCCTGCGCCCTTTGCAGAAAATGGAGGAGGTGGAAACGGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR CCA 90 bp | GGAGTTCACTCCTCCTCACCAAGCCAGAGCTTCTGGAATTTAACTTaGGGAGACTCACACCCTCACCCCAGGCGCCAATCGGGGCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: GVHSSSPSQSFWNLT*GDSHPHPRRQSGQK Trigger: CTTCTGCCCCGATTGGCGCCTGGGGTGAGGGTGTGAGTCTCCCCAAGTTAAATTCCAGAAGCTCTGGCTTGGTGAGGAGGAGTGAACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR TCA 90 bp | CAGAGGTGGGGAGCAGGCAACTCACTCTCAGCCATGGTTTCTGCTTaGCATGCGCAAAACAGGGTGGCCCACTCCGAACAAGTTTGTGCC | + |
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Preference number: 1 (lower is better) Translates to: QRWGAGNSLSAMVSA*HAQNRVAHSEQVCA Trigger: GGCACAAACTTGTTCGGAGTGGGCCACCCTGTTTTGCGCATGTCAAGCAGAAACCATGGCTGAGAGTGAGTTGCCTGCTCCCCACCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR GCA 90 bp | GTGGGGAGCAGGCAACTCACTCTCAGCCATGGTTTCTGCTTGACATaGGCAAAACAGGGTGGCCCACTCCGAACAAGTTTGTGCCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: VGSRQLTLSHGFCLT*AKQGGPLRTSLCQR Trigger: CCTCTGGCACAAACTTGTTCGGAGTGGGCCACCCTGTTTTGCGCATGTCAAGCAGAAACCATGGCTGAGAGTGAGTTGCCTGCTCCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR CCA 90 bp | AGTGAGTTCCTCAGAGGTGGGGAGCAGGCAACTCACTCTCAGCCATaGTTTCTGCTTGACATGCGCAAAACAGGGTGGCCCACTCCGAAC | + |
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Preference number: 1 (lower is better) Translates to: SEFLRGGEQATHSQP*FLLDMRKTGWPTPN Trigger: GTTCGGAGTGGGCCACCCTGTTTTGCGCATGTCAAGCAGAAACCATGGCTGAGAGTGAGTTGCCTGCTCCCCACCTCTGAGGAACTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR CCA 90 bp | CCTTGCATTACCCACACTCACTCGCACTCCTTAAACGTAGTGAGGTaGTACCTACCCTCCCACAGTCATCACCCACACCCCCTCAGACAC | + |
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Preference number: 1 (lower is better) Translates to: PCITHTHSHSLNVVR*YLPSHSHHPHPLRH Trigger: GTGTCTGAGGGGGTGTGGGTGATGACTGTGGGAGGGTAGGTACCACCTCACTACGTTTAAGGAGTGCGAGTGAGTGTGGGTAATGCAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR CCA 90 bp | GCGCGGCTGGTCCCGCGGGGTCTCCCGAGTAGCGGAAGATATTTGTaGGTCTTTGAGACCCTTCCTCGCTTAGAAATTACTCTCATCTAC | + |
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Preference number: 1 (lower is better) Translates to: ARLVPRGLPSSGRYL*VFETLPRLEITLIY Trigger: GTAGATGAGAGTAATTTCTAAGCGAGGAAGGGTCTCAAAGACCCACAAATATCTTCCGCTACTCGGGAGACCCCGCGGGACCAGCCGCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR CCA 90 bp | TCTTTAGAGAGTGGAGTTCACTCCTCCTCACCAAGCCAGAGCTTCTaGAATTTAACTTGGGGAGACTCACACCCTCACCCCAGGCGCCAA | + |
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Preference number: 1 (lower is better) Translates to: SLESGVHSSSPSQSF*NLTWGDSHPHPRRQ Trigger: TTGGCGCCTGGGGTGAGGGTGTGAGTCTCCCCAAGTTAAATTCCAGAAGCTCTGGCTTGGTGAGGAGGAGTGAACTCCACTCTCTAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR CCA 90 bp | ACTCACTCTCAGCCATGGTTTCTGCTTGACATGCGCAAAACAGGGTaGCCCACTCCGAACAAGTTTGTGCCAGAGGTACATTCAAGGTAC | + |
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Preference number: 1 (lower is better) Translates to: THSQPWFLLDMRKTG*PTPNKFVPEVHSRY Trigger: GTACCTTGAATGTACCTCTGGCACAAACTTGTTCGGAGTGGGCCACCCTGTTTTGCGCATGTCAAGCAGAAACCATGGCTGAGAGTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR GCA 90 bp | TTACTCCAAAGTTACCCACTCACTAGAGTCATTCCCACCCTCCCTTaGATTACCCACACTCACTCGCACTCCTTAAACGTAGTGAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: LLQSYPLTRVIPTLP*ITHTHSHSLNVVRW Trigger: CCACCTCACTACGTTTAAGGAGTGCGAGTGAGTGTGGGTAATGCAAGGGAGGGTGGGAATGACTCTAGTGAGTGGGTAACTTTGGAGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR CCA 90 bp | AACGAACACAGTAGTACAATATTCTGCGAGTGGGTATGCCCAGGCTaGGCATTTACAAGGAATAGAAAAATCAGGCCGGGCGTGGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: NEHSSTIFCEWVCPG*AFTRNRKIRPGVVA Trigger: AGCCACCACGCCCGGCCTGATTTTTCTATTCCTTGTAAATGCCCAGCCTGGGCATACCCACTCGCAGAATATTGTACTACTGTGTTCGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR CCA 90 bp | TCCTTTTGGACCATTGCCCAGAAGCCTTGCCTCTTCTTTAGAGAGTaGAGTTCACTCCTCCTCACCAAGCCAGAGCTTCTGGAATTTAAC | + |
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Preference number: 1 (lower is better) Translates to: SFWTIAQKPCLFFRE*SSLLLTKPELLEFN Trigger: GTTAAATTCCAGAAGCTCTGGCTTGGTGAGGAGGAGTGAACTCCACTCTCTAAAGAAGAGGCAAGGCTTCTGGGCAATGGTCCAAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR GCA 90 bp | GGATGCAATAACGAACACAGTAGTACAATATTCTGCGAGTGGGTATaGCCAGGCTGGGCATTTACAAGGAATAGAAAAATCAGGCCGGGC | + |
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Preference number: 1 (lower is better) Translates to: GCNNEHSSTIFCEWV*PGWAFTRNRKIRPG Trigger: GCCCGGCCTGATTTTTCTATTCCTTGTAAATGCCCAGCCTGGGCATACCCACTCGCAGAATATTGTACTACTGTGTTCGTTATTGCATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR GCA 90 bp | GCTCAGACTCTGGGATGCAATAACGAACACAGTAGTACAATATTCTaGGAGTGGGTATGCCCAGGCTGGGCATTTACAAGGAATAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: AQTLGCNNEHSSTIF*EWVCPGWAFTRNRK Trigger: TTTTCTATTCCTTGTAAATGCCCAGCCTGGGCATACCCACTCGCAGAATATTGTACTACTGTGTTCGTTATTGCATCCCAGAGTCTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR TCA 90 bp | ATATTACCCACTTACTCTGAGTGCCATGAAGGCAGGGATTTTTATTaGGTTTACTCCCTTCCATATCCCCAGCTCCTGGAACATAGTAGG | + |
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Preference number: 1 (lower is better) Translates to: ILPTYSECHEGRDFY*VYSLPYPQLLEHSR Trigger: CCTACTATGTTCCAGGAGCTGGGGATATGGAAGGGAGTAAACTCAATAAAAATCCCTGCCTTCATGGCACTCAGAGTAAGTGGGTAATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR CCA 90 bp | ACTCTGGGATGCAATAACGAACACAGTAGTACAATATTCTGCGAGTaGGTATGCCCAGGCTGGGCATTTACAAGGAATAGAAAAATCAGG | + |
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Preference number: 1 (lower is better) Translates to: TLGCNNEHSSTIFCE*VCPGWAFTRNRKIR Trigger: CCTGATTTTTCTATTCCTTGTAAATGCCCAGCCTGGGCATACCCACTCGCAGAATATTGTACTACTGTGTTCGTTATTGCATCCCAGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR CCA 90 bp | TTGAAATCAGGGGTTTACAGAAGCCAGATGCAGCCCTCCAACAGCTaGCACATTCAATTTACTTGTGAATTTTTGCTTGGGATTTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: LKSGVYRSQMQPSNS*HIQFTCEFLLGICP Trigger: AGGGCAAATCCCAAGCAAAAATTCACAAGTAAATTGAATGTGCCAGCTGTTGGAGGGCTGCATCTGGCTTCTGTAAACCCCTGATTTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR GCA 90 bp | CTATCCCTTATTATACAACGATTATGCCTTGATGGGAGAGCAGCATaGAACAAACACGCTGGAGGCTTTCGTAGCATTTATTCAAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: LSLIIQRLCLDGRAA*NKHAGGFRSIYSSS Trigger: TGAGCTTGAATAAATGCTACGAAAGCCTCCAGCGTGTTTGTTGCATGCTGCTCTCCCATCAAGGCATAATCGTTGTATAATAAGGGATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR TCA 90 bp | ATCCACCTCTTTCGCACTAGTCAGATGTTACCTGTGCTATCCAAATaGTACCCATTCTTACTCCAAAGTTACCCACTCACTAGAGTCATT | + |
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Preference number: 1 (lower is better) Translates to: IHLFRTSQMLPVLSK*YPFLLQSYPLTRVI Trigger: AATGACTCTAGTGAGTGGGTAACTTTGGAGTAAGAATGGGTATCATTTGGATAGCACAGGTAACATCTGACTAGTGCGAAAGAGGTGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR TCA 90 bp | TTCAGCTGTTACCCACATGTACTCAAATGCTACCTACGCTCACTCTaGTGTCTCCAAGTAATTCAAATATTACCCACTTACTCTGAGTGC | + |
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Preference number: 1 (lower is better) Translates to: FSCYPHVLKCYLRSL*CLQVIQILPTYSEC Trigger: GCACTCAGAGTAAGTGGGTAATATTTGAATTACTTGGAGACATCAGAGTGAGCGTAGGTAGCATTTGAGTACATGTGGGTAACAGCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR TCA 90 bp | CTCCGAACAAGTTTGTGCCAGAGGTACATTCAAGGTACATGCTTTTaGAACACAGAAAACGGCTCTAGACTTTGCAATAACAGGATTTCC | + |
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Preference number: 1 (lower is better) Translates to: LRTSLCQRYIQGTCF*NTENGSRLCNNRIS Trigger: GGAAATCCTGTTATTGCAAAGTCTAGAGCCGTTTTCTGTGTTTCAAAAGCATGTACCTTGAATGTACCTCTGGCACAAACTTGTTCGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR TCA 90 bp | ACTGTAGGTCCTCAGGAAATTTTGTTGGTTGCATGGATACATGGATaGATGAGCAATCCACACTCAACCAGATTTTATGATCATTCAGCT | + |
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Preference number: 1 (lower is better) Translates to: TVGPQEILLVAWIHG*MSNPHSTRFYDHSA Trigger: AGCTGAATGATCATAAAATCTGGTTGAGTGTGGATTGCTCATTCATCCATGTATCCATGCAACCAACAAAATTTCCTGAGGACCTACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR TCA 90 bp | AAATTCTTCTTCACCTCAGTGTTAACGTCGTTCATTGGTAACTCTTaGAAATGGCCTCTTAATGATTTACCTCCTTTTGGACCATTGCCC | + |
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Preference number: 1 (lower is better) Translates to: KFFFTSVLTSFIGNS*KWPLNDLPPFGPLP Trigger: GGGCAATGGTCCAAAAGGAGGTAAATCATTAAGAGGCCATTTTCAAGAGTTACCAATGAACGACGTTAACACTGAGGTGAAGAAGAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGGGAGCAGGCAACTCACTCTCAGCCATGGTTTCTGCTTGACATGCGCAAAAGGTTCTGGCTCTGACTaGGCCTGCGCGGCTGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: VGSRQLTLSHGFCLTCAKGSGSD*ACAAGP Trigger: GGGACCAGCCGCGCAGGCGCAGTCAGAGCCAGAACC...TTTTGCGCATGTCAAGCAGAAACCATGGCTGAGAGTGAGTTGCCTGCTCCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR-3UTR TCA 90 bp | CACTCCTCCTCACCAAGCCAGAGCTTCTGGAATTTAACTTGGGGAGACTCACACGCTAGGTTCTGGCTCTaGCTGCGCCTGCGCGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: HSSSPSQSFWNLTWGDSHARFWL*LRLRGW Trigger: CCAGCCGCGCAGGCGCAGTCAGAGCCAGAACCTAGC...GTGTGAGTCTCCCCAAGTTAAATTCCAGAAGCTCTGGCTTGGTGAGGAGGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTTCTGCTTGACATGCGCAAAACAGGGTGGCCCACTCCGAACAAGTTTGTGCACAGCCGAAGGAGGATaGCGGCCCTTCTCCCGAGTA | + |
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Preference number: 2 (lower is better) Translates to: GFCLTCAKQGGPLRTSLCTAEGG*RPFSRV Trigger: TACTCGGGAGAAGGGCCGCCATCCTCCTTCGGCTGT...GCACAAACTTGTTCGGAGTGGGCCACCCTGTTTTGCGCATGTCAAGCAGAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR CAA 90 bp | TCAGAGGTGGGGAGCAGGCAACTCACTCTCAGCCATGGTTTCTGCTaGACATGCGCAAAACAGGGTGGCCCACTCCGAACAAGTTTGTGC | + |
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Preference number: 2 (lower is better) Translates to: SEVGSRQLTLSHGFC*TCAKQGGPLRTSLC Trigger: GCACAAACTTGTTCGGAGTGGGCCACCCTGTTTTGCGCATGTCAAGCAGAAACCATGGCTGAGAGTGAGTTGCCTGCTCCCCACCTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR-3UTR GCA 90 bp | GCAAGAGAGGCTGTCCCCAGAATCAGGCCGTGGGTGACAGCCGAAGGAGGATGGTCAATTATACGCGGATaGCACCCACACACTCTAATG | + |
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Preference number: 2 (lower is better) Translates to: AREAVPRIRPWVTAEGGWSIIRG*HPHTLM Trigger: CATTAGAGTGTGTGGGTGGCATCCGCGTATAATTGA...CCATCCTCCTTCGGCTGTCACCCACGGCCTGATTCTGGGGACAGCCTCTCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAGAGAGGCTGTCCCCAGAATCAGGCCGTGGGTGACAGCCGAAGGAGGATGGTCACGGGCAAGGTTTTaGTCTGTTTATTCCCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: AREAVPRIRPWVTAEGGWSRARF*SVYSPS Trigger: AGAAGGGGAATAAACAGACCAAAACCTTGCCCGTGA...CCATCCTCCTTCGGCTGTCACCCACGGCCTGATTCTGGGGACAGCCTCTCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTCACTCCTCCTCACCAAGCCAGAGCTTCTGGAATTTAACTTGGGGAGACTCCCGCTTACAGATCAGTaGGTTCCTCAGAGGTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: SSLLLTKPELLEFNLGRLPLTDQ*VPQRWG Trigger: TCCCCACCTCTGAGGAACTCACTGATCTGTAAGCGG...GAGTCTCCCCAAGTTAAATTCCAGAAGCTCTGGCTTGGTGAGGAGGAGTGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGAAAACGGCTCTAGACTTTGCAATAACAGGATTTCCAGGAGGGCGCAAAGCACCTCCTCCATTTTCTaGAAAGGGCGCAGGCGCCTG | + |
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Preference number: 2 (lower is better) Translates to: TENGSRLCNNRISRRAQSTSSIF*KGRRRL Trigger: CAGGCGCCTGCGCCCTTTGCAGAAAATGGAGGAGGT...GCTTTGCGCCCTCCTGGAAATCCTGTTATTGCAAAGTCTAGAGCCGTTTTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTGCGAGTGGGTATGCCCAGGCTGGGCATTTACAAGGAATAGAAAAATCAGGCCAAGATCGTGCCACTaGACTCCAGCCTGGGCTACA | + |
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Preference number: 2 (lower is better) Translates to: FCEWVCPGWAFTRNRKIRPRSCH*TPAWAT Trigger: TGTAGCCCAGGCTGGAGTGCAGTGGCACGATCTTGG...CCTGATTTTTCTATTCCTTGTAAATGCCCAGCCTGGGCATACCCACTCGCAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR CAA 90 bp | CCCGCACCTACTCAAATAGCTACTATGAGAGTCACGGGCAAGGTTTaGGTCTGTTTATTCCCCTTCTGTATCCCCAGTGCCTGGCACACT | + |
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Preference number: 2 (lower is better) Translates to: PAPTQIATMRVTGKV*VCLFPFCIPSAWHT Trigger: AGTGTGCCAGGCACTGGGGATACAGAAGGGGAATAAACAGACCAAAACCTTGCCCGTGACTCTCATAGTAGCTATTTGAGTAGGTGCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTCACTCCTCCTCACCAAGCCAGAGCTTCTGGAATTTAACTTGGGGAGACTCCCTCCTGGGTCTGCGTaGGTTTTCTTCAACTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: SSLLLTKPELLEFNLGRLPPGSA*VFFNSS Trigger: ACTGGAGTTGAAGAAAACTCACGCAGACCCAGGAGG...GAGTCTCCCCAAGTTAAATTCCAGAAGCTCTGGCTTGGTGAGGAGGAGTGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGAAAACGGCTCTAGACTTTGCAATAACAGGATTTCCAGGAGGGCGCAAAGCCTTCTGTATCCCCAGTaGCTGGCACACTGTAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: TENGSRLCNNRISRRAQSLLYPQ*LAHCRS Trigger: GGACCTACAGTGTGCCAGGCACTGGGGATACAGAAG...GCTTTGCGCCCTCCTGGAAATCCTGTTATTGCAAAGTCTAGAGCCGTTTTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR-3UTR CCA 90 bp | CGCGGGGTCTCCCGAGTAGCGGAAGATATTTGTGGGTCTTTGAGACCCTTCCTCGGTTGCATGGATACATaGATGAATGAGCAATCCACA | + |
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Preference number: 2 (lower is better) Translates to: RGVSRVAEDICGSLRPFLGCMDT*MNEQST Trigger: TGTGGATTGCTCATTCATCCATGTATCCATGCAACC...GAGGAAGGGTCTCAAAGACCCACAAATATCTTCCGCTACTCGGGAGACCCCGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR-3UTR CCA 90 bp | CCGCTTCTGACCACTTCTGTAAGAGAGACTCAGCGTGTAGAGAAAGACGACAGCATGCGCAAAACAGGGTaGCCCACTCCGAACAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: PLLTTSVRETQRVEKDDSMRKTG*PTPNKF Trigger: AAACTTGTTCGGAGTGGGCCACCCTGTTTTGCGCAT...GCTGTCGTCTTTCTCTACACGCTGAGTCTCTCTTACAGAAGTGGTCAGAAGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR-3UTR CCA 90 bp | GATCTCCCTGACACGTTCCTCCTGGGTCTGCGTGAGTTTTCTTCAACTCCAGTATTAAACGTAGTGAGGTaGTACCTACCCTCCCACAGT | + |
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Preference number: 2 (lower is better) Translates to: DLPDTFLLGLREFSSTPVLNVVR*YLPSHS Trigger: ACTGTGGGAGGGTAGGTACCACCTCACTACGTTTAA...TACTGGAGTTGAAGAAAACTCACGCAGACCCAGGAGGAACGTGTCAGGGAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTCACTCCTCCTCACCAAGCCAGAGCTTCTGGAATTTAACTTGGGGAGACTCCTGACACGTTCCTCCTaGGTCTGCGTGAGTTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: SSLLLTKPELLEFNLGRLLTRSS*VCVSFL Trigger: AAGAAAACTCACGCAGACCCAGGAGGAACGTGTCAG...GAGTCTCCCCAAGTTAAATTCCAGAAGCTCTGGCTTGGTGAGGAGGAGTGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAGCAGGCAACTCACTCTCAGCCATGGTTTCTGCTTGACATGCGCAAAACAGCCTGTGCTATCCAAATaGTACCCATTCTTACTCCAA | + |
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Preference number: 2 (lower is better) Translates to: GSRQLTLSHGFCLTCAKQPVLSK*YPFLLQ Trigger: TTGGAGTAAGAATGGGTATCATTTGGATAGCACAGG...CTGTTTTGCGCATGTCAAGCAGAAACCATGGCTGAGAGTGAGTTGCCTGCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCAGAAGCCTTGCCTCTTCTTTAGAGAGTGGAGTTCACTCCTCCTCACCAAGTACCTACGCTCACTCTaGTGTCTCCAAGTAATTCAA | + |
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Preference number: 2 (lower is better) Translates to: AQKPCLFFREWSSLLLTKYLRSL*CLQVIQ Trigger: TTGAATTACTTGGAGACATCAGAGTGAGCGTAGGTA...CTTGGTGAGGAGGAGTGAACTCCACTCTCTAAAGAAGAGGCAAGGCTTCTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR-3UTR TCA 90 bp | CACTCCTCCTCACCAAGCCAGAGCTTCTGGAATTTAACTTGGGGAGACTCACACGGATACATGGATGAATaGGCAATCCACACTCAACCA | + |
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Preference number: 2 (lower is better) Translates to: HSSSPSQSFWNLTWGDSHGYMDE*AIHTQP Trigger: TGGTTGAGTGTGGATTGCTCATTCATCCATGTATCC...GTGTGAGTCTCCCCAAGTTAAATTCCAGAAGCTCTGGCTTGGTGAGGAGGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR-3UTR TCA 90 bp | GATCTCCCTGACACGTTCCTCCTGGGTCTGCGTGAGTTTTCTTCAACTCCAGTAGCATGGATACATGGATaGATGAGCAATCCACACTCA | + |
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Preference number: 2 (lower is better) Translates to: DLPDTFLLGLREFSSTPVAWIHG*MSNPHS Trigger: TGAGTGTGGATTGCTCATTCATCCATGTATCCATGC...TACTGGAGTTGAAGAAAACTCACGCAGACCCAGGAGGAACGTGTCAGGGAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCAGAAGCCTTGCCTCTTCTTTAGAGAGTGGAGTTCACTCCTCCTCACCAAGCTCAACCAGATTTTATaGTCATTCAGCTGTTACCCA | + |
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Preference number: 2 (lower is better) Translates to: AQKPCLFFREWSSLLLTKLNQIL*SFSCYP Trigger: TGGGTAACAGCTGAATGATCATAAAATCTGGTTGAG...CTTGGTGAGGAGGAGTGAACTCCACTCTCTAAAGAAGAGGCAAGGCTTCTGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTCACTCCTCCTCACCAAGCCAGAGCTTCTGGAATTTAACTTGGGGAGACTCCTCAGGAAATTTTGTTaGTTGCATGGATACATGGAT | + |
|
Preference number: 2 (lower is better) Translates to: SSLLLTKPELLEFNLGRLLRKFC*LHGYMD Trigger: ATCCATGTATCCATGCAACCAACAAAATTTCCTGAG...GAGTCTCCCCAAGTTAAATTCCAGAAGCTCTGGCTTGGTGAGGAGGAGTGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR CAA 90 bp | ATGCAGCCCTCCAACAGCTGGCACATTCAATTTACTTGTGAATTTTaGCTTGGGATTTGCCCTACCAGTGATGTTTTCACTCAGCTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: MQPSNSWHIQFTCEF*LGICPTSDVFTQLS Trigger: ACTTAGCTGAGTGAAAACATCACTGGTAGGGCAAATCCCAAGCAAAAATTCACAAGTAAATTGAATGTGCCAGCTGTTGGAGGGCTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAGAAAACGGCTCTAGACTTTGCAATAACAGGATTTCCAGGAGGGCGCAAAGCGGAAATTTTGTTGGTTaGATGGATACATGGATGAAT | + |
|
Preference number: 2 (lower is better) Translates to: TENGSRLCNNRISRRAQSGNFVG*MDTWMN Trigger: ATTCATCCATGTATCCATGCAACCAACAAAATTTCC...GCTTTGCGCCCTCCTGGAAATCCTGTTATTGCAAAGTCTAGAGCCGTTTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR CAA 90 bp | AAAAGAGATTCAGTCAAACCTTTGCAGATCCTTGAACTAACAAGTTaGCAAATTGACAGGTCCGTTGTCTCTGAGCAAAAGATCTGCCTA | + |
|
Preference number: 2 (lower is better) Translates to: KRDSVKPLQILELTS*QIDRSVVSEQKICL Trigger: TAGGCAGATCTTTTGCTCAGAGACAACGGACCTGTCAATTTGCAAACTTGTTAGTTCAAGGATCTGCAAAGGTTTGACTGAATCTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR GCA 72 bp | CAACGGTCGGACGCGCTGCTAGGTTCTGGCTCTGACTaGGCCTGCGCGGCTGGTCCCGCGGGGTCTCCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: QRSDALLGSGSD*ACAAGPAGSPE Trigger: CTCGGGAGACCCCGCGGGACCAGCCGCGCAGGCGCAGTCAGAGCCAGAACCTAGCAGCGCGTCCGACCGTTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR TCA 72 bp | ATAGCAACGGTCGGACGCGCTGCTAGGTTCTGGCTCTaGCTGCGCCTGCGCGGCTGGTCCCGCGGGGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: IATVGRAARFWL*LRLRGWSRGVS Trigger: GGAGACCCCGCGGGACCAGCCGCGCAGGCGCAGTCAGAGCCAGAACCTAGCAGCGCGTCCGACCGTTGCTAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR CCA 72 bp | CCCCCAGCAAGAGAGGCTGTCCCCAGAATCAGGCCGTaGGTGACAGCCGAAGGAGGATGGCGGCCCTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PPAREAVPRIRP*VTAEGGWRPFS Trigger: GGAGAAGGGCCGCCATCCTCCTTCGGCTGTCACCCACGGCCTGATTCTGGGGACAGCCTCTCTTGCTGGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR TCA 72 bp | CAGCAAGAGAGGCTGTCCCCAGAATCAGGCCGTGGGTaGCAGCCGAAGGAGGATGGCGGCCCTTCTCCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: QQERLSPESGRG*QPKEDGGPSPE Trigger: CTCGGGAGAAGGGCCGCCATCCTCCTTCGGCTGTCACCCACGGCCTGATTCTGGGGACAGCCTCTCTTGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR CCA 72 bp | CCCAGAATCAGGCCGTGGGTGACAGCCGAAGGAGGATaGCGGCCCTTCTCCCGAGTAGGGATCTCCCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: PRIRPWVTAEGG*RPFSRVGISLT Trigger: TGTCAGGGAGATCCCTACTCGGGAGAAGGGCCGCCATCCTCCTTCGGCTGTCACCCACGGCCTGATTCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR CCA 72 bp | CCACCTCCTCCATTTTCTGCAAAGGGCGCAGGCGCCTaGGGTCAGCCTGTGGTCTCCATAGCAACGGTCGGA | + |
|
Preference number: 3 (lower is better) Translates to: PPPPFSAKGAGA*GQPVVSIATVG Trigger: TCCGACCGTTGCTATGGAGACCACAGGCTGACCCCAGGCGCCTGCGCCCTTTGCAGAAAATGGAGGAGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR GCA 72 bp | TTGGAATCCAGGACCGTTTCCACCTCCTCCATTTTCTaGAAAGGGCGCAGGCGCCTGGGGTCAGCCTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LESRTVSTSSIF*KGRRRLGSACG Trigger: ACCACAGGCTGACCCCAGGCGCCTGCGCCCTTTGCAGAAAATGGAGGAGGTGGAAACGGTCCTGGATTCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR CCA 72 bp | CTCAGAGGTGGGGAGCAGGCAACTCACTCTCAGCCATaGTTTCTGCTTGACATGCGCAAAACAGGGTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LRGGEQATHSQP*FLLDMRKTGWP Trigger: GGGCCACCCTGTTTTGCGCATGTCAAGCAGAAACCATGGCTGAGAGTGAGTTGCCTGCTCCCCACCTCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR CCA 72 bp | ACCCACACTCACTCGCACTCCTTAAACGTAGTGAGGTaGTACCTACCCTCCCACAGTCATCACCCACACCCC | + |
|
Preference number: 3 (lower is better) Translates to: THTHSHSLNVVR*YLPSHSHHPHP Trigger: GGGGTGTGGGTGATGACTGTGGGAGGGTAGGTACCACCTCACTACGTTTAAGGAGTGCGAGTGAGTGTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR CCA 72 bp | TCCTCCTCACCAAGCCAGAGCTTCTGGAATTTAACTTaGGGAGACTCACACCCTCACCCCAGGCGCCAATCG | + |
|
Preference number: 3 (lower is better) Translates to: SSSPSQSFWNLT*GDSHPHPRRQS Trigger: CGATTGGCGCCTGGGGTGAGGGTGTGAGTCTCCCCAAGTTAAATTCCAGAAGCTCTGGCTTGGTGAGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR TCA 72 bp | GGAGCAGGCAACTCACTCTCAGCCATGGTTTCTGCTTaGCATGCGCAAAACAGGGTGGCCCACTCCGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: GAGNSLSAMVSA*HAQNRVAHSEQ Trigger: TTGTTCGGAGTGGGCCACCCTGTTTTGCGCATGTCAAGCAGAAACCATGGCTGAGAGTGAGTTGCCTGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR CCA 72 bp | AGTGGAGTTCACTCCTCCTCACCAAGCCAGAGCTTCTaGAATTTAACTTGGGGAGACTCACACCCTCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: SGVHSSSPSQSF*NLTWGDSHPHP Trigger: GGGGTGAGGGTGTGAGTCTCCCCAAGTTAAATTCCAGAAGCTCTGGCTTGGTGAGGAGGAGTGAACTCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGAGAGGCTGTCCCCAGAATCAGGCCGTGGGTGACAGCCGAAGGAGGATGGAGGCAGGGATTTTTATaGAGTTTACTCCCTTCCATA | + |
|
Preference number: 3 (lower is better) Translates to: AREAVPRIRPWVTAEGGWRQGFL*SLLPSI Trigger: TATGGAAGGGAGTAAACTCAATAAAAATCCCTGCCT...CCATCCTCCTTCGGCTGTCACCCACGGCCTGATTCTGGGGACAGCCTCTCTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR TCA 72 bp | AAGACGACAGCTTTTCAAGAGCCGCTTACAGATCAGTaGGTTCCTCAGAGGTGGGGAGCAGGCAACTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: KTTAFQEPLTDQ*VPQRWGAGNSL Trigger: GAGTGAGTTGCCTGCTCCCCACCTCTGAGGAACTCACTGATCTGTAAGCGGCTCTTGAAAAGCTGTCGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR CCA 72 bp | GTCCCGCGGGGTCTCCCGAGTAGCGGAAGATATTTGTaGGTCTTTGAGACCCTTCCTCGCTTAGAAATTACT | + |
|
Preference number: 3 (lower is better) Translates to: VPRGLPSSGRYL*VFETLPRLEIT Trigger: AGTAATTTCTAAGCGAGGAAGGGTCTCAAAGACCCACAAATATCTTCCGCTACTCGGGAGACCCCGCGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR CCA 72 bp | CAGCCATGGTTTCTGCTTGACATGCGCAAAACAGGGTaGCCCACTCCGAACAAGTTTGTGCCAGAGGTACAT | + |
|
Preference number: 3 (lower is better) Translates to: QPWFLLDMRKTG*PTPNKFVPEVH Trigger: ATGTACCTCTGGCACAAACTTGTTCGGAGTGGGCCACCCTGTTTTGCGCATGTCAAGCAGAAACCATGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR-3UTR CAA 90 bp | GATCTCCCTGACACGTTCCTCCTGGGTCTGCGTGAGTTTTCTTCAACTCCAGTAGAGATCTGCAAAACCTaGGAATCCAGGACCGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: DLPDTFLLGLREFSSTPVEICKT*ESRTVS Trigger: GGAAACGGTCCTGGATTCCAAGGTTTTGCAGATCTC...TACTGGAGTTGAAGAAAACTCACGCAGACCCAGGAGGAACGTGTCAGGGAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR-3UTR CAA 90 bp | CCGCTTCTGACCACTTCTGTAAGAGAGACTCAGCGTGTAGAGAAAGACGACAGCTCAAGGTACATGCTTTaGAAACACAGAAAACGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PLLTTSVRETQRVEKDDSSRYML*KHRKRL Trigger: GAGCCGTTTTCTGTGTTTCAAAAGCATGTACCTTGA...GCTGTCGTCTTTCTCTACACGCTGAGTCTCTCTTACAGAAGTGGTCAGAAGCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCCCACTCCGAACAAGTTTGTGCCAGAGGTACATTCAAGGTACATGCTTTTGAGTAGCGGAAGATATTaGTGGGTCTTTGAGACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: WPTPNKFVPEVHSRYMLLSSGRY*WVFETL Trigger: AAGGGTCTCAAAGACCCACAAATATCTTCCGCTACT...CAAAAGCATGTACCTTGAATGTACCTCTGGCACAAACTTGTTCGGAGTGGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR CCA 72 bp | GGGGTTTACAGAAGCCAGATGCAGCCCTCCAACAGCTaGCACATTCAATTTACTTGTGAATTTTTGCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GVYRSQMQPSNS*HIQFTCEFLLG Trigger: CCCAAGCAAAAATTCACAAGTAAATTGAATGTGCCAGCTGTTGGAGGGCTGCATCTGGCTTCTGTAAACCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR-3UTR CAA 90 bp | CCGCTTCTGACCACTTCTGTAAGAGAGACTCAGCGTGTAGAGAAAGACGACAGCAGGAAATTTTGTTGGTaGCATGGATACATGGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: PLLTTSVRETQRVEKDDSRKFCW*HGYMDE Trigger: TTCATCCATGTATCCATGCAACCAACAAAATTTCCT...GCTGTCGTCTTTCTCTACACGCTGAGTCTCTCTTACAGAAGTGGTCAGAAGCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGCGAGTGGGTATGCCCAGGCTGGGCATTTACAAGGAATAGAAAAATCAGGGGTCCTCAGGAAATTTaGTTGGTTGCATGGATACAT | + |
|
Preference number: 3 (lower is better) Translates to: FCEWVCPGWAFTRNRKIRGPQEI*LVAWIH Trigger: ATGTATCCATGCAACCAACAAAATTTCCTGAGGACC...CCTGATTTTTCTATTCCTTGTAAATGCCCAGCCTGGGCATACCCACTCGCAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR GCA 72 bp | AAATATTACCCACAACTACTTTCAATTATACGCGGATaGCACCCACACACTCTAATGCTACCCACACTCACT | + |
|
Preference number: 3 (lower is better) Translates to: KYYPQLLSIIRG*HPHTLMLPTLT Trigger: AGTGAGTGTGGGTAGCATTAGAGTGTGTGGGTGGCATCCGCGTATAATTGAAAGTAGTTGTGGGTAATATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR GCA 72 bp | AACGAACACAGTAGTACAATATTCTGCGAGTGGGTATaGCCAGGCTGGGCATTTACAAGGAATAGAAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: NEHSSTIFCEWV*PGWAFTRNRKI Trigger: GATTTTTCTATTCCTTGTAAATGCCCAGCCTGGGCATACCCACTCGCAGAATATTGTACTACTGTGTTCGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR TCA 72 bp | TTTCGCACTAGTCAGATGTTACCTGTGCTATCCAAATaGTACCCATTCTTACTCCAAAGTTACCCACTCACT | + |
|
Preference number: 3 (lower is better) Translates to: FRTSQMLPVLSK*YPFLLQSYPLT Trigger: AGTGAGTGGGTAACTTTGGAGTAAGAATGGGTATCATTTGGATAGCACAGGTAACATCTGACTAGTGCGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR TCA 72 bp | CCTTCCTCGCTTAGAAATTACTCTCATCTACTCAAATaGTACCCATACACATATTCAGGTGTTACCCGCACA | + |
|
Preference number: 3 (lower is better) Translates to: PSSLRNYSHLLK*YPYTYSGVTRT Trigger: TGTGCGGGTAACACCTGAATATGTGTATGGGTATCATTTGAGTAGATGAGAGTAATTTCTAAGCGAGGAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR TCA 72 bp | AGTGATGTTTTCACTCAGCTAAGTAGCTTCAAATGGTaGCAGTTTTGCATGACAACTTGCATTGGAGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SDVFTQLSSFKW*QFCMTTCIGVP Trigger: TGGGACTCCAATGCAAGTTGTCATGCAAAACTGTCACCATTTGAAGCTACTTAGCTGAGTGAAAACATCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR TCA 72 bp | TACCCACATGTACTCAAATGCTACCTACGCTCACTCTaGTGTCTCCAAGTAATTCAAATATTACCCACTTAC | + |
|
Preference number: 3 (lower is better) Translates to: YPHVLKCYLRSL*CLQVIQILPTY Trigger: GTAAGTGGGTAATATTTGAATTACTTGGAGACATCAGAGTGAGCGTAGGTAGCATTTGAGTACATGTGGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR TCA 72 bp | AGTTTGTGCCAGAGGTACATTCAAGGTACATGCTTTTaGAACACAGAAAACGGCTCTAGACTTTGCAATAAC | + |
|
Preference number: 3 (lower is better) Translates to: SLCQRYIQGTCF*NTENGSRLCNN Trigger: GTTATTGCAAAGTCTAGAGCCGTTTTCTGTGTTTCAAAAGCATGTACCTTGAATGTACCTCTGGCACAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR CCA 72 bp | AGGTCCTCAGGAAATTTTGTTGGTTGCATGGATACATaGATGAATGAGCAATCCACACTCAACCAGATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: RSSGNFVGCMDT*MNEQSTLNQIL Trigger: TAAAATCTGGTTGAGTGTGGATTGCTCATTCATCCATGTATCCATGCAACCAACAAAATTTCCTGAGGACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
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| 3UTR TCA 72 bp | CCTCAGGAAATTTTGTTGGTTGCATGGATACATGGATaGATGAGCAATCCACACTCAACCAGATTTTATGAT | + |
|
Preference number: 3 (lower is better) Translates to: PQEILLVAWIHG*MSNPHSTRFYD Trigger: ATCATAAAATCTGGTTGAGTGTGGATTGCTCATTCATCCATGTATCCATGCAACCAACAAAATTTCCTGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR TCA 72 bp | TTCACCTCAGTGTTAACGTCGTTCATTGGTAACTCTTaGAAATGGCCTCTTAATGATTTACCTCCTTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: FTSVLTSFIGNS*KWPLNDLPPFG Trigger: TCCAAAAGGAGGTAAATCATTAAGAGGCCATTTTCAAGAGTTACCAATGAACGACGTTAACACTGAGGTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR GCA 72 bp | CAAATTGACAGGTCCGTTGTCTCTGAGCAAAAGATCTaGCTACTCACATGTATTTGGATTTTACCTGATTTT | + |
|
Preference number: 3 (lower is better) Translates to: QIDRSVVSEQKI*LLTCIWILPDF Trigger: AAAATCAGGTAAAATCCAAATACATGTGAGTAGGCAGATCTTTTGCTCAGAGACAACGGACCTGTCAATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR GCA 72 bp | CCTGAAATCCACAATAAGCACAAAATACAGTCTTCATaGTGCAATATGATAAGAAATGTCACACTATCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PEIHNKHKIQSS*CNMIRNVTLSL Trigger: AAGGGATAGTGTGACATTTCTTATCATATTGCAGCATGAAGACTGTATTTTGTGCTTATTGTGGATTTCAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR CAA 72 bp | GGGAGCAGGCAACTCACTCTCAGCCATGGTTTCTGCTaGACATGCGCAAAACAGGGTGGCCCACTCCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: GSRQLTLSHGFC*TCAKQGGPLRT Trigger: TGTTCGGAGTGGGCCACCCTGTTTTGCGCATGTCAAGCAGAAACCATGGCTGAGAGTGAGTTGCCTGCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR CAA 72 bp | CTCCTCCTCACCAAGCCAGAGCTTCTGGAATTTAACTaGGGGAGACTCACACCCTCACCCCAGGCGCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: LLLTKPELLEFN*GRLTPSPQAPI Trigger: GATTGGCGCCTGGGGTGAGGGTGTGAGTCTCCCCAAGTTAAATTCCAGAAGCTCTGGCTTGGTGAGGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR CAA 72 bp | AAATGGCCTCTTAATGATTTACCTCCTTTTGGACCATaGCCCAGAAGCCTTGCCTCTTCTTTAGAGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KWPLNDLPPFGP*PRSLASSLESG Trigger: TCCACTCTCTAAAGAAGAGGCAAGGCTTCTGGGCAATGGTCCAAAAGGAGGTAAATCATTAAGAGGCCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR CAA 72 bp | TCAGTCAAACCTTTGCAGATCCTTGAACTAACAAGTTaGCAAATTGACAGGTCCGTTGTCTCTGAGCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVKPLQILELTS*QIDRSVVSEQK Trigger: CTTTTGCTCAGAGACAACGGACCTGTCAATTTGCAAACTTGTTAGTTCAAGGATCTGCAAAGGTTTGACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| 3UTR CAA 72 bp | ACAGCTGGCACATTCAATTTACTTGTGAATTTTTGCTaGGGATTTGCCCTACCAGTGATGTTTTCACTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TAGTFNLLVNFC*GFALPVMFSLS Trigger: GCTGAGTGAAAACATCACTGGTAGGGCAAATCCCAAGCAAAAATTCACAAGTAAATTGAATGTGCCAGCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617053.2 |
||
| CDS GCA 90 bp | CCCTGGCAGGCAGGGAGGCGCGTCCCTCACCGCTGGCCCAGAGGTTaGACTCAGTGCCCTGTCGCCGGACTAGGACGAGGATGTGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PWQAGRRVPHRWPRG*TQCPVAGLGRGCGR Trigger: GCGGCCACATCCTCGTCCTAGTCCGGCGACAGGGCACTGAGTGCAACCTCTGGGCCAGCGGTGAGGGACGCGCCTCCCTGCCTGCCAGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
||
| CDS GCA 90 bp | GCAGGGAGGCGCGTCCCTCACCGCTGGCCCAGAGGTTGCACTCAGTaGCCTGTCGCCGGACTAGGACGAGGATGTGGCCGCTGCACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGRRVPHRWPRGCTQ*PVAGLGRGCGRCTC Trigger: GCAAGTGCAGCGGCCACATCCTCGTCCTAGTCCGGCGACAGGGCACTGAGTGCAACCTCTGGGCCAGCGGTGAGGGACGCGCCTCCCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
||
| CDS CCA 90 bp | GCCCAGGCACAGAGCACTTTCTTGCAGGCAGCTCTCTGGGGCCCGTaGCTGGGGGACACAGTTCCTGCCTCAGGACCCGGGCCATATCCT | + |
|
Preference number: 5 (lower is better) Translates to: AQAQSTFLQAALWGP*LGDTVPASGPGPYP Trigger: AGGATATGGCCCGGGTCCTGAGGCAGGAACTGTGTCCCCCAGCCACGGGCCCCAGAGAGCTGCCTGCAAGAAAGTGCTCTGTGCCTGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617053.3 |
||
| CDS TCA 90 bp | AGGGACTTACGCGTGCTGGAGAAGCAGAAGGCGGTGTTTGCCACCTaGCTCGTGGCTCCCGGGTCCTGGGCAAGGCTGCACCAAGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RDLRVLEKQKAVFAT*LVAPGSWARLHQGG Trigger: CCCTCCTTGGTGCAGCCTTGCCCAGGACCCGGGAGCCACGAGTCAGGTGGCAAACACCGCCTTCTGCTTCTCCAGCACGCGTAAGTCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
||
| CDS CCA 90 bp | AGGCACAGAGCACTTTCTTGCAGGCAGCTCTCTGGGGCCCGTGGCTaGGGGACACAGTTCCTGCCTCAGGACCCGGGCCATATCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RHRALSCRQLSGARG*GTQFLPQDPGHILH Trigger: GTGGAGGATATGGCCCGGGTCCTGAGGCAGGAACTGTGTCCCCCAGCCACGGGCCCCAGAGAGCTGCCTGCAAGAAAGTGCTCTGTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.3 |
||
| CDS GCA 90 bp | GATTCCCAGGGACTTACGCGTGCTGGAGAAGCAGAAGGCGGTGTTTaGCACCTGACTCGTGGCTCCCGGGTCCTGGGCAAGGCTGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: DSQGLTRAGEAEGGV*HLTRGSRVLGKAAP Trigger: TGGTGCAGCCTTGCCCAGGACCCGGGAGCCACGAGTCAGGTGGCAAACACCGCCTTCTGCTTCTCCAGCACGCGTAAGTCCCTGGGAATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
||
| CDS TCA 90 bp | AATTATCCAGGATGCCGCGATTCCTTCCCAAAGGCTACGAGAGAGTaGGGCCTCAGGGGCCGGAGGCCGCTCCCAGGACCCCTTCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NYPGCRDSFPKATRE*GLRGRRPLPGPLRP Trigger: TGGACGAAGGGGTCCTGGGAGCGGCCTCCGGCCCCTGAGGCCTCACTCTCTCGTAGCCTTTGGGAAGGAATCGCGGCATCCTGGATAATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.3 |
||
| CDS CCA 90 bp | TACGCGTGCTGGAGAAGCAGAAGGCGGTGTTTGCCACCTGACTCGTaGCTCCCGGGTCCTGGGCAAGGCTGCACCAAGGAGGGTCTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: YACWRSRRRCLPPDS*LPGPGQGCTKEGLK Trigger: CTTTAGACCCTCCTTGGTGCAGCCTTGCCCAGGACCCGGGAGCCACGAGTCAGGTGGCAAACACCGCCTTCTGCTTCTCCAGCACGCGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS CCA 90 bp | GCTCCCTCTGAGTGGGCTCGAAGATTCCCAGGGACTTACGCGTGCTaGAGAAGCAGAAGGCGGTGTTTGCCACCTGACTCGTGGCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: APSEWARRFPGTYAC*RSRRRCLPPDSWLP Trigger: CGGGAGCCACGAGTCAGGTGGCAAACACCGCCTTCTGCTTCTCCAGCACGCGTAAGTCCCTGGGAATCTTCGAGCCCACTCAGAGGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS GCA 90 bp | CGGTGTTTGCCACCTGACTCGTGGCTCCCGGGTCCTGGGCAAGGCTaGACCAAGGAGGGTCTAAAGATGATGCTTCCCCTTTCTTGGCGT | + |
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Preference number: 5 (lower is better) Translates to: RCLPPDSWLPGPGQG*TKEGLKMMLPLSWR Trigger: ACGCCAAGAAAGGGGAAGCATCATCTTTAGACCCTCCTTGGTGCAGCCTTGCCCAGGACCCGGGAGCCACGAGTCAGGTGGCAAACACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS CCA 90 bp | CAAGGCTGCACCAAGGAGGGTCTAAAGATGATGCTTCCCCTTTCTTaGCGTGGCCTCCGAAGGTCTCACAGGCCCCAACGGTCTCTCCGG | + |
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Preference number: 5 (lower is better) Translates to: QGCTKEGLKMMLPLS*RGLRRSHRPQRSLR Trigger: CCGGAGAGACCGTTGGGGCCTGTGAGACCTTCGGAGGCCACGCCAAGAAAGGGGAAGCATCATCTTTAGACCCTCCTTGGTGCAGCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS CCA 90 bp | CTGCACCAAGGAGGGTCTAAAGATGATGCTTCCCCTTTCTTGGCGTaGCCTCCGAAGGTCTCACAGGCCCCAACGGTCTCTCCGGATCTG | + |
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Preference number: 5 (lower is better) Translates to: LHQGGSKDDASPFLA*PPKVSQAPTVSPDL Trigger: CAGATCCGGAGAGACCGTTGGGGCCTGTGAGACCTTCGGAGGCCACGCCAAGAAAGGGGAAGCATCATCTTTAGACCCTCCTTGGTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS GCA 90 bp | TCCCCAGGATCATCAGGGACTTGTAACTGTCCACCTCCAGGGCCTTaGACCCGTGCTCCAACAGTGCAATGTCCTTCACCCCGAACAGCA | + |
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Preference number: 5 (lower is better) Translates to: SPGSSGTCNCPPPGP*TRAPTVQCPSPRTA Trigger: TGCTGTTCGGGGTGAAGGACATTGCACTGTTGGAGCACGGGTGCAAGGCCCTGGAGGTGGACAGTTACAAGTCCCTGATGATCCTGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS GCA 90 bp | GACACAGTTCCTGCCTCAGGACCCGGGCCATATCCTCCACCGTCCTaGCCTCGCTCTGCAGAAAGAGGTTCAGCTTGGTCAGGAATTCAA | + |
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Preference number: 5 (lower is better) Translates to: DTVPASGPGPYPPPS*PRSAERGSAWSGIQ Trigger: TTGAATTCCTGACCAAGCTGAACCTCTTTCTGCAGAGCGAGGGCAGGACGGTGGAGGATATGGCCCGGGTCCTGAGGCAGGAACTGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS TCA 90 bp | CTTGCCCAACTCTTTGAGGCAGCAGTATGCCCGCTGGTGGACACCTaGGCTGCCTCGGGAATCCACGAAATTATCCAGGATGCCGCGATT | + |
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Preference number: 5 (lower is better) Translates to: LAQLFEAAVCPLVDT*AASGIHEIIQDAAI Trigger: AATCGCGGCATCCTGGATAATTTCGTGGATTCCCGAGGCAGCTCAGGTGTCCACCAGCGGGCATACTGCTGCCTCAAAGAGTTGGGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS GCA 90 bp | CTTGTAACTGTCCACCTCCAGGGCCTTGCACCCGTGCTCCAACAGTaGAATGTCCTTCACCCCGAACAGCATCTTGCCCAACTCTTTGAG | + |
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Preference number: 5 (lower is better) Translates to: LVTVHLQGLAPVLQQ*NVLHPEQHLAQLFE Trigger: CTCAAAGAGTTGGGCAAGATGCTGTTCGGGGTGAAGGACATTGCACTGTTGGAGCACGGGTGCAAGGCCCTGGAGGTGGACAGTTACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS CCA 72 bp | CGGCCCTGGCAGGCAGGGAGGCGCGTCCCTCACCGCTaGCCCAGAGGTTGCACTCAGTGCCCTGTCGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: RPWQAGRRVPHR*PRGCTQCPVAG Trigger: TCCGGCGACAGGGCACTGAGTGCAACCTCTGGGCCAGCGGTGAGGGACGCGCCTCCCTGCCTGCCAGGGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS CAA 90 bp | GCCCTGGCAGGCAGGGAGGCGCGTCCCTCACCGCTGGCCCAGAGGTaGCACTCAGTGCCCTGTCGCCGGACTAGGACGAGGATGTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: ALAGREARPSPLAQR*HSVPCRRTRTRMWP Trigger: CGGCCACATCCTCGTCCTAGTCCGGCGACAGGGCACTGAGTGCAACCTCTGGGCCAGCGGTGAGGGACGCGCCTCCCTGCCTGCCAGGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS GCA 72 bp | CGCGTCCCTCACCGCTGGCCCAGAGGTTGCACTCAGTaGCCTGTCGCCGGACTAGGACGAGGATGTGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RVPHRWPRGCTQ*PVAGLGRGCGR Trigger: GCGGCCACATCCTCGTCCTAGTCCGGCGACAGGGCACTGAGTGCAACCTCTGGGCCAGCGGTGAGGGACGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS GCA 72 bp | GCAGGGAGGCGCGTCCCTCACCGCTGGCCCAGAGGTTaGACTCAGTGCCCTGTCGCCGGACTAGGACGAGGA | + |
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Preference number: 6 (lower is better) Translates to: AGRRVPHRWPRG*TQCPVAGLGRG Trigger: TCCTCGTCCTAGTCCGGCGACAGGGCACTGAGTGCAACCTCTGGGCCAGCGGTGAGGGACGCGCCTCCCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS TCA 72 bp | CGCGTGCTGGAGAAGCAGAAGGCGGTGTTTGCCACCTaGCTCGTGGCTCCCGGGTCCTGGGCAAGGCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: RVLEKQKAVFAT*LVAPGSWARLH Trigger: GTGCAGCCTTGCCCAGGACCCGGGAGCCACGAGTCAGGTGGCAAACACCGCCTTCTGCTTCTCCAGCACGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS CCA 72 bp | GCACTTTCTTGCAGGCAGCTCTCTGGGGCCCGTGGCTaGGGGACACAGTTCCTGCCTCAGGACCCGGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: ALSCRQLSGARG*GTQFLPQDPGH Trigger: ATGGCCCGGGTCCTGAGGCAGGAACTGTGTCCCCCAGCCACGGGCCCCAGAGAGCTGCCTGCAAGAAAGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS GCA 72 bp | GGACTTACGCGTGCTGGAGAAGCAGAAGGCGGTGTTTaGCACCTGACTCGTGGCTCCCGGGTCCTGGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: GLTRAGEAEGGV*HLTRGSRVLGK Trigger: CTTGCCCAGGACCCGGGAGCCACGAGTCAGGTGGCAAACACCGCCTTCTGCTTCTCCAGCACGCGTAAGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS GCA 72 bp | CCCACACCCCCTCAGACACTCCCCACGCCCACCCGATaGCACCACCTCACAGCTTCTTGTCTGAGGCGTGAT | + |
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Preference number: 6 (lower is better) Translates to: PTPPQTLPTPTR*HHLTASCLRRD Trigger: ATCACGCCTCAGACAAGAAGCTGTGAGGTGGTGGCATCGGGTGGGCGTGGGGAGTGTCTGAGGGGGTGTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS CCA 72 bp | TGGAGAAGCAGAAGGCGGTGTTTGCCACCTGACTCGTaGCTCCCGGGTCCTGGGCAAGGCTGCACCAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: WRSRRRCLPPDS*LPGPGQGCTKE Trigger: CTCCTTGGTGCAGCCTTGCCCAGGACCCGGGAGCCACGAGTCAGGTGGCAAACACCGCCTTCTGCTTCTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS CAA 72 bp | GGGACTTACGCGTGCTGGAGAAGCAGAAGGCGGTGTTaGCCACCTGACTCGTGGCTCCCGGGTCCTGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: GTYACWRSRRRC*PPDSWLPGPGQ Trigger: TTGCCCAGGACCCGGGAGCCACGAGTCAGGTGGCAAACACCGCCTTCTGCTTCTCCAGCACGCGTAAGTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS CAA 90 bp | AGATTCCCAGGGACTTACGCGTGCTGGAGAAGCAGAAGGCGGTGTTaGCCACCTGACTCGTGGCTCCCGGGTCCTGGGCAAGGCTGCACC | + |
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Preference number: 6 (lower is better) Translates to: RFPGTYACWRSRRRC*PPDSWLPGPGQGCT Trigger: GGTGCAGCCTTGCCCAGGACCCGGGAGCCACGAGTCAGGTGGCAAACACCGCCTTCTGCTTCTCCAGCACGCGTAAGTCCCTGGGAATCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS GCA 72 bp | CCTGCCTCAGGACCCGGGCCATATCCTCCACCGTCCTaGCCTCGCTCTGCAGAAAGAGGTTCAGCTTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: PASGPGPYPPPS*PRSAERGSAWS Trigger: TGACCAAGCTGAACCTCTTTCTGCAGAGCGAGGGCAGGACGGTGGAGGATATGGCCCGGGTCCTGAGGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS GCA 72 bp | CCACCTGACTCGTGGCTCCCGGGTCCTGGGCAAGGCTaGACCAAGGAGGGTCTAAAGATGATGCTTCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: PPDSWLPGPGQG*TKEGLKMMLPL Trigger: AAGGGGAAGCATCATCTTTAGACCCTCCTTGGTGCAGCCTTGCCCAGGACCCGGGAGCCACGAGTCAGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS CAA 90 bp | GCAAGGCTGCACCAAGGAGGGTCTAAAGATGATGCTTCCCCTTTCTaGGCGTGGCCTCCGAAGGTCTCACAGGCCCCAACGGTCTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: ARLHQGGSKDDASPF*AWPPKVSQAPTVSP Trigger: CGGAGAGACCGTTGGGGCCTGTGAGACCTTCGGAGGCCACGCCAAGAAAGGGGAAGCATCATCTTTAGACCCTCCTTGGTGCAGCCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS TCA 72 bp | CGCCCACCCGATGCCACCACCTCACAGCTTCTTGTCTaGGGCGTGATGCCGCCGGCGGTTTTTCTTGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: RPPDATTSQLLV*GVMPPAVFLVL Trigger: AAGAACAAGAAAAACCGCCGGCGGCATCACGCCTCAGACAAGAAGCTGTGAGGTGGTGGCATCGGGTGGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS CCA 72 bp | GAGTGGGCTCGAAGATTCCCAGGGACTTACGCGTGCTaGAGAAGCAGAAGGCGGTGTTTGCCACCTGACTCG | + |
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Preference number: 6 (lower is better) Translates to: EWARRFPGTYAC*RSRRRCLPPDS Trigger: CGAGTCAGGTGGCAAACACCGCCTTCTGCTTCTCCAGCACGCGTAAGTCCCTGGGAATCTTCGAGCCCACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS CCA 72 bp | GGAGGGTCTAAAGATGATGCTTCCCCTTTCTTGGCGTaGCCTCCGAAGGTCTCACAGGCCCCAACGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GGSKDDASPFLA*PPKVSQAPTVS Trigger: AGAGACCGTTGGGGCCTGTGAGACCTTCGGAGGCCACGCCAAGAAAGGGGAAGCATCATCTTTAGACCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS GCA 72 bp | TCATCAGGGACTTGTAACTGTCCACCTCCAGGGCCTTaGACCCGTGCTCCAACAGTGCAATGTCCTTCACCC | + |
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Preference number: 6 (lower is better) Translates to: SSGTCNCPPPGP*TRAPTVQCPSP Trigger: GGGTGAAGGACATTGCACTGTTGGAGCACGGGTGCAAGGCCCTGGAGGTGGACAGTTACAAGTCCCTGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS GCA 72 bp | ACCCGGGCCATATCCTCCACCGTCCTGCCCTCGCTCTaGAGAAAGAGGTTCAGCTTGGTCAGGAATTCAATG | + |
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Preference number: 6 (lower is better) Translates to: TRAISSTVLPSL*RKRFSLVRNSM Trigger: CATTGAATTCCTGACCAAGCTGAACCTCTTTCTGCAGAGCGAGGGCAGGACGGTGGAGGATATGGCCCGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS CAA 72 bp | ATGTCCTTCACCCCGAACAGCATCTTGCCCAACTCTTaGAGGCAGCAGTATGCCCGCTGGTGGACACCTGAG | + |
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Preference number: 6 (lower is better) Translates to: MSFTPNSILPNS*RQQYARWWTPE Trigger: CTCAGGTGTCCACCAGCGGGCATACTGCTGCCTCAAAGAGTTGGGCAAGATGCTGTTCGGGGTGAAGGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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| CDS TCA 72 bp | CCGATGCCACCACCTCACAGCTTCTTGTCTGAGGCGTaGTGCCGCCGGCGGTTTTTCTTGTTCTTCCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: PMPPPHSFLSEA*CRRRFFLFFLL Trigger: CAAAAGGAAGAACAAGAAAAACCGCCGGCGGCATCACGCCTCAGACAAGAAGCTGTGAGGTGGTGGCATCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000617053.3 |
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