RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PNMA8A (Homo sapiens)

Ensembl gene IDs: ENSG00000182013

Ensembl transcript IDs: ENST00000313683.15, ENST00000438932.2, ENST00000602246.1

Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCAGAGGTCGCTaGCCATTCCGAGGAGGGAGCAAGGCGTGGGGGAGAAAAGCTGAA +
Preference number: 1 (lower is better)
Translates to: QGHPALPNARACRGR*PFRGGSKAWGRKAE
Trigger: TTCAGCTTTTCTCCCCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTCTGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR GCA 90 bp GAAGGCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCAAATaGCAGGGCCTGCAGAGGTCGCTGACCATTCCGAGGAGGGAGCAA +
Preference number: 1 (lower is better)
Translates to: EGGRKNMAGPPSSSK*QGLQRSLTIPRREQ
Trigger: TTGCTCCCTCCTCGGAATGGTCAGCGACCTCTGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR CCA 90 bp AACTTACCCCGCTGGTTACACGAGAGGAAGGCGGGAGGAAGAATATaGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCAGAGGT +
Preference number: 1 (lower is better)
Translates to: NLPRWLHERKAGGRI*QGHPALPNARACRG
Trigger: ACCTCTGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGCCTTCCTCTCGTGTAACCAGCGGGGTAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR CCA 90 bp ATAAAACCAGGTTTGCAGCGAAGGTCCTGGCTTAACTTACCCCGCTaGTTACACGAGAGGAAGGCGGGAGGAAGAATATGGCAGGGCCAC +
Preference number: 1 (lower is better)
Translates to: IKPGLQRRSWLNLPR*LHERKAGGRIWQGH
Trigger: GTGGCCCTGCCATATTCTTCCTCCCGCCTTCCTCTCGTGTAACCAGCGGGGTAAGTTAAGCCAGGACCTTCGCTGCAAACCTGGTTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR CCA 90 bp CTGGAGACTGAAGGAGCAATAAAACCAGGTTTGCAGCGAAGGTCCTaGCTTAACTTACCCCGCTGGTTACACGAGAGGAAGGCGGGAGGA +
Preference number: 1 (lower is better)
Translates to: LETEGAIKPGLQRRS*LNLPRWLHERKAGG
Trigger: TCCTCCCGCCTTCCTCTCGTGTAACCAGCGGGGTAAGTTAAGCCAGGACCTTCGCTGCAAACCTGGTTTTATTGCTCCTTCAGTCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR CCA 90 bp AAAATAGATTTGGATTACATCTTTGTGGACGGCTACGATACAGTTTaGAAACCATTATCTCAGGGACCCTGCTCTCTCCTCTACACATGC +
Preference number: 1 (lower is better)
Translates to: KIDLDYIFVDGYDTV*KPLSQGPCSLLYTC
Trigger: GCATGTGTAGAGGAGAGAGCAGGGTCCCTGAGATAATGGTTTCCAAACTGTATCGTAGCCGTCCACAAAGATGTAATCCAAATCTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR TCA 90 bp ATCTCTATCAACAGGGGCCCTAAGAGAGTCCAAAGTCTTATTCAGTaGCAAGAGAGAACTTGGTTGACTTGGTACTTCTTCCTTGTTCTT +
Preference number: 1 (lower is better)
Translates to: ISINRGPKRVQSLIQ*QERTWLTWYFFLVL
Trigger: AAGAACAAGGAAGAAGTACCAAGTCAACCAAGTTCTCTCTTGTCACTGAATAAGACTTTGGACTCTCTTAGGGCCCCTGTTGATAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR TCA 90 bp ACTTACTACCATACACCTGAACAGTCACGGCAGAACAAGAGCATGTaGATGACGAAAGGAAACTTGCTTTCAGGGTGTCAGATTATAGAA +
Preference number: 1 (lower is better)
Translates to: TYYHTPEQSRQNKSM*MTKGNLLSGCQIIE
Trigger: TTCTATAATCTGACACCCTGAAAGCAAGTTTCCTTTCGTCATTCACATGCTCTTGTTCTGCCGTGACTGTTCAGGTGTATGGTAGTAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR TCA 90 bp CTAAGAGAGTCCAAAGTCTTATTCAGTGACAAGAGAGAACTTGGTTaGCTTGGTACTTCTTCCTTGTTCTTTCAACTCCTCAGTATGGGT +
Preference number: 1 (lower is better)
Translates to: LRESKVLFSDKRELG*LGTSSLFFQLLSMG
Trigger: ACCCATACTGAGGAGTTGAAAGAACAAGGAAGAAGTACCAAGTCAACCAAGTTCTCTCTTGTCACTGAATAAGACTTTGGACTCTCTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313683.15
3UTR-3UTR GCA 90 bp TACCCCGCTGGTTACACGAGAGGAAGGCGGGAGGAAGAATATGGCAGGGCCACCTCTTACCAACTCTCCTaGCTCCGAAGAGAAGGTGAG +
Preference number: 2 (lower is better)
Translates to: YPAGYTRGRREEEYGRATSYQLS*LRREGE
Trigger: CTCACCTTCTCTTCGGAGGCAGGAGAGTTGGTAAGA...GGTGGCCCTGCCATATTCTTCCTCCCGCCTTCCTCTCGTGTAACCAGCGGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR TCA 90 bp CGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCAGTGGGGGAGAAAAGCTaGACATGGATGAGTGTAACA +
Preference number: 2 (lower is better)
Translates to: REEEYGRATQLFQMPGPAVGEKS*TWMSVT
Trigger: TGTTACACTCATCCATGTTCAGCTTTTCTCCCCCAC...TGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR TCA 90 bp AATCCAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGCCTCCGAAGAGAAGGTaGGTAGAGAAGGCGGTGAAA +
Preference number: 2 (lower is better)
Translates to: NPIHPWVSLGTHPRRTSMPPKRR*VEKAVK
Trigger: TTTCACCGCCTTCTCTACTCACCTTCTCTTCGGAGG...CATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR GCA 90 bp CAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGCACAGTAGTGACCTTCTGCTaGAAAGATGGTGACAGTTTG +
Preference number: 2 (lower is better)
Translates to: QFTPGFRLAHTPGERRCTVVTFC*KDGDSL
Trigger: CAAACTGTCACCATCTTTGCAGCAGAAGGTCACTAC...TGTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR GCA 90 bp AATCCAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGGCTCATTGCAACCTCTaGCTCCTGGATTCAAGCAAT +
Preference number: 2 (lower is better)
Translates to: NPIHPWVSLGTHPRRTSMAHCNL*LLDSSN
Trigger: ATTGCTTGAATCCAGGAGGCAGAGGTTGCAATGAGC...CATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR CCA 90 bp CCAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGCACAGGGCTCATCCCAAATaGGAATCAAAGTGCCATTTT +
Preference number: 2 (lower is better)
Translates to: PIHPWVSLGTHPRRTSMHRAHPK*ESKCHF
Trigger: AAAATGGCACTTTGATTCCCATTTGGGATGAGCCCT...GTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR TCA 90 bp CCTGCCTCCGAAGAGAAGGTGAGTAGAGAAGGCGGTGAAACGGCAGGCCTGGTACAAAGTCTTATTCAGTaGCAAGAGAGAACTTGGTTG +
Preference number: 2 (lower is better)
Translates to: PASEEKVSREGGETAGLVQSLIQ*QERTWL
Trigger: CAACCAAGTTCTCTCTTGTCACTGAATAAGACTTTG...TACCAGGCCTGCCGTTTCACCGCCTTCTCTACTCACCTTCTCTTCGGAGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR TCA 90 bp ACATGCACAGGAATTTCTTCCACTTCTAACCTCGCTCATCAGTCACATTTACAAGCCTGCAGAGGTCGCTaGCCATTCCGAGGAGGGAGC +
Preference number: 2 (lower is better)
Translates to: TCTGISSTSNLAHQSHLQACRGR*PFRGGS
Trigger: GCTCCCTCCTCGGAATGGTCAGCGACCTCTGCAGGC...TTGTAAATGTGACTGATGAGCGAGGTTAGAAGTGGAAGAAATTCCTGTGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR CCA 90 bp TACCCCGCTGGTTACACGAGAGGAAGGCGGGAGGAAGAATATGGCAGGGCCACCAGAACTTGGTTGACTTaGTACTTCTTCCTTGTTCTT +
Preference number: 2 (lower is better)
Translates to: YPAGYTRGRREEEYGRATRTWLT*YFFLVL
Trigger: AAGAACAAGGAAGAAGTACCAAGTCAACCAAGTTCT...GGTGGCCCTGCCATATTCTTCCTCCCGCCTTCCTCTCGTGTAACCAGCGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR GCA 90 bp ACGATACAGTTTGGAAACCATTATCTCAGGGACCCTGCTCTCTCCTCTACACATTCTTACCAACTCTCCTaGCTCCGAAGAGAAGGTGAG +
Preference number: 2 (lower is better)
Translates to: TIQFGNHYLRDPALSSTHSYQLS*LRREGE
Trigger: CTCACCTTCTCTTCGGAGGCAGGAGAGTTGGTAAGA...ATGTGTAGAGGAGAGAGCAGGGTCCCTGAGATAATGGTTTCCAAACTGTATCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR CCA 90 bp AATCCAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGAGAACTTGGTTGACTTaGTACTTCTTCCTTGTTCTT +
Preference number: 2 (lower is better)
Translates to: NPIHPWVSLGTHPRRTSMRTWLT*YFFLVL
Trigger: AAGAACAAGGAAGAAGTACCAAGTCAACCAAGTTCT...CATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR CCA 90 bp CACCATGTTAATACATTTACTTACTACCATACACCTGAACAGTCACGGCAGAACGCGGGAGGAAGAATATaGCAGGGCCACCCAGCTCTT +
Preference number: 2 (lower is better)
Translates to: HHVNTFTYYHTPEQSRQNAGGRI*QGHPAL
Trigger: AAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGC...GTTCTGCCGTGACTGTTCAGGTGTATGGTAGTAAGTAAATGTATTAACATGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR TCA 90 bp AATGGACCCGTTTTGAAATTAGAAGCTGGACAGTTACAGGCTTTGGTCTCTTCACCTCCGAAGAGAAGGTaGGTAGAGAAGGCGGTGAAA +
Preference number: 2 (lower is better)
Translates to: NGPVLKLEAGQLQALVSSPPKRR*VEKAVK
Trigger: TTTCACCGCCTTCTCTACTCACCTTCTCTTCGGAGG...TGAAGAGACCAAAGCCTGTAACTGTCCAGCTTCTAATTTCAAAACGGGTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR TCA 90 bp CGATACAGTTTGGAAACCATTATCTCAGGGACCCTGCTCTCTCCTCTACACATGCCTCTTACTATAATGTaGGTAGTGACCTTCTGCTGC +
Preference number: 2 (lower is better)
Translates to: RYSLETIISGTLLSPLHMPLTIM*VVTFCC
Trigger: GCAGCAGAAGGTCACTACTCACATTATAGTAAGAGG...CATGTGTAGAGGAGAGAGCAGGGTCCCTGAGATAATGGTTTCCAAACTGTATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR CCA 90 bp CGCCCTGAAAACTTGCAAGGGCTAATACTCTATGATAGAATATTACTACTGTTCTTGCAGCGAAGGTCCTaGCTTAACTTACCCCGCTGG +
Preference number: 2 (lower is better)
Translates to: RPENLQGLILYDRILLLFLQRRS*LNLPRW
Trigger: CCAGCGGGGTAAGTTAAGCCAGGACCTTCGCTGCAA...GAACAGTAGTAATATTCTATCATAGAGTATTAGCCCTTGCAAGTTTTCAGGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR CCA 90 bp AATGGACCCGTTTTGAAATTAGAAGCTGGACAGTTACAGGCTTTGGTCTCTTCAACTCTTGGGACCTCCTaGCTAGATAACTGGAGGATG +
Preference number: 2 (lower is better)
Translates to: NGPVLKLEAGQLQALVSSTLGTS*LDNWRM
Trigger: CATCCTCCAGTTATCTAGCCAGGAGGTCCCAAGAGT...TGAAGAGACCAAAGCCTGTAACTGTCCAGCTTCTAATTTCAAAACGGGTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR GCA 90 bp CACCATGTTAATACATTTACTTACTACCATACACCTGAACAGTCACGGCAGAACGGACCTAGGAATGCCTaGGTCCTTCCCTATAATCAC +
Preference number: 2 (lower is better)
Translates to: HHVNTFTYYHTPEQSRQNGPRNA*VLPYNH
Trigger: GTGATTATAGGGAAGGACGCAGGCATTCCTAGGTCC...GTTCTGCCGTGACTGTTCAGGTGTATGGTAGTAAGTAAATGTATTAACATGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR GCA 90 bp TGGACCCGTTTTGAAATTAGAAGCTGGACAGTTACAGGCTTTGGTCTCTTCAAGGTAGTGACCTTCTGCTaGAAAGATGGTGACAGTTTG +
Preference number: 2 (lower is better)
Translates to: WTRFEIRSWTVTGFGLFKVVTFC*KDGDSL
Trigger: CAAACTGTCACCATCTTTGCAGCAGAAGGTCACTAC...CTTGAAGAGACCAAAGCCTGTAACTGTCCAGCTTCTAATTTCAAAACGGGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR CCA 90 bp CGCCCTGAAAACTTGCAAGGGCTAATACTCTATGATAGAATATTACTACTGTTCCTTAACTTACCCCGCTaGTTACACGAGAGGAAGGCG +
Preference number: 2 (lower is better)
Translates to: RPENLQGLILYDRILLLFLNLPR*LHERKA
Trigger: CGCCTTCCTCTCGTGTAACCAGCGGGGTAAGTTAAG...GAACAGTAGTAATATTCTATCATAGAGTATTAGCCCTTGCAAGTTTTCAGGGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR CAA 90 bp GAGAGTCCAAAGTCTTATTCAGTGACAAGAGAGAACTTGGTTGACTaGGTACTTCTTCCTTGTTCTTTCAACTCCTCAGTATGGGTGGTC +
Preference number: 2 (lower is better)
Translates to: ESPKSYSVTRENLVD*VLLPCSFNSSVWVV
Trigger: GACCACCCATACTGAGGAGTTGAAAGAACAAGGAAGAAGTACCAAGTCAACCAAGTTCTCTCTTGTCACTGAATAAGACTTTGGACTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313683.15
3UTR-3UTR TCA 90 bp AGAAAAATAGATTTGGATTACATCTTTGTGGACGGCTACGATACAGTTTGGAAATCCCCACAGGATTCCTaGGAGGGCTCATCCCAAATG +
Preference number: 2 (lower is better)
Translates to: RKIDLDYIFVDGYDTVWKSPQDS*EGSSQM
Trigger: CATTTGGGATGAGCCCTCTCAGGAATCCTGTGGGGA...TTTCCAAACTGTATCGTAGCCGTCCACAAAGATGTAATCCAAATCTATTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR GCA 90 bp GTTAATACATTTACTTACTACCATACACCTGAACAGTCACGGCAGAACAAGAGCGCTCATTGCAACCTCTaGCTCCTGGATTCAAGCAAT +
Preference number: 2 (lower is better)
Translates to: VNTFTYYHTPEQSRQNKSAHCNL*LLDSSN
Trigger: ATTGCTTGAATCCAGGAGGCAGAGGTTGCAATGAGC...GCTCTTGTTCTGCCGTGACTGTTCAGGTGTATGGTAGTAAGTAAATGTATTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR CCA 90 bp AACTCAAAGACTTTGAGGTCTAGGCAGACATTCTTTTTCCCTAAAACTAACTCTCTTAACTTACCCCGCTaGTTACACGAGAGGAAGGCG +
Preference number: 2 (lower is better)
Translates to: NSKTLRSRQTFFFPKTNSLNLPR*LHERKA
Trigger: CGCCTTCCTCTCGTGTAACCAGCGGGGTAAGTTAAG...AGAGTTAGTTTTAGGGAAAAAGAATGTCTGCCTAGACCTCAAAGTCTTTGAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR CAA 90 bp AAAAATAGATTTGGATTACATCTTTGTGGACGGCTACGATACAGTTaGGAAACCATTATCTCAGGGACCCTGCTCTCTCCTCTACACATG +
Preference number: 2 (lower is better)
Translates to: KNRFGLHLCGRLRYS*ETIISGTLLSPLHM
Trigger: CATGTGTAGAGGAGAGAGCAGGGTCCCTGAGATAATGGTTTCCAAACTGTATCGTAGCCGTCCACAAAGATGTAATCCAAATCTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR CCA 90 bp AATGGACCCGTTTTGAAATTAGAAGCTGGACAGTTACAGGCTTTGGTCTCTTCAGGCTACGATACAGTTTaGAAACCATTATCTCAGGGA +
Preference number: 2 (lower is better)
Translates to: NGPVLKLEAGQLQALVSSGYDTV*KPLSQG
Trigger: TCCCTGAGATAATGGTTTCCAAACTGTATCGTAGCC...TGAAGAGACCAAAGCCTGTAACTGTCCAGCTTCTAATTTCAAAACGGGTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR TCA 90 bp CCCGTTTTGAAATTAGAAGCTGGACAGTTACAGGCTTTGGTCTCTTCAAGAATCCAAAGTCTTATTCAGTaGCAAGAGAGAACTTGGTTG +
Preference number: 2 (lower is better)
Translates to: PVLKLEAGQLQALVSSRIQSLIQ*QERTWL
Trigger: CAACCAAGTTCTCTCTTGTCACTGAATAAGACTTTG...GATTCTTGAAGAGACCAAAGCCTGTAACTGTCCAGCTTCTAATTTCAAAACGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR CCA 90 bp AGAAAAATAGATTTGGATTACATCTTTGTGGACGGCTACGATACAGTTTGGAAAAGGGCTCATCCCAAATaGGAATCAAAGTGCCATTTT +
Preference number: 2 (lower is better)
Translates to: RKIDLDYIFVDGYDTVWKRAHPK*ESKCHF
Trigger: AAAATGGCACTTTGATTCCCATTTGGGATGAGCCCT...TTTCCAAACTGTATCGTAGCCGTCCACAAAGATGTAATCCAAATCTATTTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR CCA 72 bp CGCTGGTTACACGAGAGGAAGGCGGGAGGAAGAATATaGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCC +
Preference number: 3 (lower is better)
Translates to: RWLHERKAGGRI*QGHPALPNARA
Trigger: GGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGCCTTCCTCTCGTGTAACCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR GCA 72 bp AGGAAGAATATGGCAGGGCCACCCAGCTCTTCCAAATaGCAGGGCCTGCAGAGGTCGCTGACCATTCCGAGG +
Preference number: 3 (lower is better)
Translates to: RKNMAGPPSSSK*QGLQRSLTIPR
Trigger: CCTCGGAATGGTCAGCGACCTCTGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR GCA 72 bp GGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATaGACACAGCTGTGTAGCTGCAAACGGAAACCACTC +
Preference number: 3 (lower is better)
Translates to: GFRLAHTPGERR*TQLCSCKRKPL
Trigger: GAGTGGTTTCCGTTTGCAGCTACACAGCTGTGTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR CCA 72 bp GGTTTGCAGCGAAGGTCCTGGCTTAACTTACCCCGCTaGTTACACGAGAGGAAGGCGGGAGGAAGAATATGG +
Preference number: 3 (lower is better)
Translates to: GLQRRSWLNLPR*LHERKAGGRIW
Trigger: CCATATTCTTCCTCCCGCCTTCCTCTCGTGTAACCAGCGGGGTAAGTTAAGCCAGGACCTTCGCTGCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR CAA 90 bp CAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGCACAGCAATAAAACCAGGTTaGCAGCGAAGGTCCTGGCTT +
Preference number: 3 (lower is better)
Translates to: QFTPGFRLAHTPGERRCTAIKPG*QRRSWL
Trigger: AAGCCAGGACCTTCGCTGCAAACCTGGTTTTATTGC...TGTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR TCA 72 bp ATTCCGAGGAGGGAGCAAGGCGTGGGGGAGAAAAGCTaGACATGGATGAGTGTAACAGTGACCCTGCTCATG +
Preference number: 3 (lower is better)
Translates to: IPRREQGVGEKS*TWMSVTVTLLM
Trigger: CATGAGCAGGGTCACTGTTACACTCATCCATGTTCAGCTTTTCTCCCCCACGCCTTGCTCCCTCCTCGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR CCA 72 bp TCTCTTCAAGAATCCAATTCACCCCTGGGTTTCGCTTaGCACACACCCCAGGAGAACGTCGATGCACACAGC +
Preference number: 3 (lower is better)
Translates to: SLQESNSPLGFA*HTPQENVDAHS
Trigger: GCTGTGTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTGGATTCTTGAAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR CCA 72 bp ACAGGCTTTGGTCTCTTCAAGAATCCAATTCACCCCTaGGTTTCGCTTGGCACACACCCCAGGAGAACGTCG +
Preference number: 3 (lower is better)
Translates to: TGFGLFKNPIHP*VSLGTHPRRTS
Trigger: CGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTGGATTCTTGAAGAGACCAAAGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR CAA 90 bp TACCCCGCTGGTTACACGAGAGGAAGGCGGGAGGAAGAATATGGCAGGGCCACCGAGAACTTGGTTGACTaGGTACTTCTTCCTTGTTCT +
Preference number: 3 (lower is better)
Translates to: YPAGYTRGRREEEYGRATENLVD*VLLPCS
Trigger: AGAACAAGGAAGAAGTACCAAGTCAACCAAGTTCTC...GGTGGCCCTGCCATATTCTTCCTCCCGCCTTCCTCTCGTGTAACCAGCGGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR CAA 90 bp CAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGCACACGGCTACGATACAGTTaGGAAACCATTATCTCAGGG +
Preference number: 3 (lower is better)
Translates to: QFTPGFRLAHTPGERRCTRLRYS*ETIISG
Trigger: CCCTGAGATAATGGTTTCCAAACTGTATCGTAGCCG...TGTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR CAA 90 bp TTACACGAGAGGAAGGCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCACAAGAGAGAACTTGGTaGACTTGGTACTTCTTCCTT +
Preference number: 3 (lower is better)
Translates to: LHERKAGGRIWQGHPALPQERTW*TWYFFL
Trigger: AAGGAAGAAGTACCAAGTCAACCAAGTTCTCTCTTG...TGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGCCTTCCTCTCGTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR CCA 72 bp GAAGGAGCAATAAAACCAGGTTTGCAGCGAAGGTCCTaGCTTAACTTACCCCGCTGGTTACACGAGAGGAAG +
Preference number: 3 (lower is better)
Translates to: EGAIKPGLQRRS*LNLPRWLHERK
Trigger: CTTCCTCTCGTGTAACCAGCGGGGTAAGTTAAGCCAGGACCTTCGCTGCAAACCTGGTTTTATTGCTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR TCA 72 bp TCCTGGCTAGATAACTGGAGGATGGAAGCTGGAGACTaGAGGAGCAATAAAACCAGGTTTGCAGCGAAGGTC +
Preference number: 3 (lower is better)
Translates to: SWLDNWRMEAGD*RSNKTRFAAKV
Trigger: GACCTTCGCTGCAAACCTGGTTTTATTGCTCCTTCAGTCTCCAGCTTCCATCCTCCAGTTATCTAGCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR GCA 72 bp ACCCCAGGAGAACGTCGATGCACACAGCTGTGTAGCTaGAAACGGAAACCACTCTCTTTTCTCTCGTATTTT +
Preference number: 3 (lower is better)
Translates to: TPGERRCTQLCS*KRKPLSFLSYF
Trigger: AAAATACGAGAGAAAAGAGAGTGGTTTCCGTTTGCAGCTACACAGCTGTGTGCATCGACGTTCTCCTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR CAA 90 bp ATAAAACCAGGTTTGCAGCGAAGGTCCTGGCTTAACTTACCCCGCTGGTTACACGAGAACTTGGTTGACTaGGTACTTCTTCCTTGTTCT +
Preference number: 3 (lower is better)
Translates to: IKPGLQRRSWLNLPRWLHENLVD*VLLPCS
Trigger: AGAACAAGGAAGAAGTACCAAGTCAACCAAGTTCTC...GTGTAACCAGCGGGGTAAGTTAAGCCAGGACCTTCGCTGCAAACCTGGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR TCA 72 bp AACAGGGGCCCTAAGAGAGTCCAAAGTCTTATTCAGTaGCAAGAGAGAACTTGGTTGACTTGGTACTTCTTC +
Preference number: 3 (lower is better)
Translates to: NRGPKRVQSLIQ*QERTWLTWYFF
Trigger: GAAGAAGTACCAAGTCAACCAAGTTCTCTCTTGTCACTGAATAAGACTTTGGACTCTCTTAGGGCCCCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR CAA 90 bp TGGACCCGTTTTGAAATTAGAAGCTGGACAGTTACAGGCTTTGGTCTCTTCAAGCAAGAGAGAACTTGGTaGACTTGGTACTTCTTCCTT +
Preference number: 3 (lower is better)
Translates to: WTRFEIRSWTVTGFGLFKQERTW*TWYFFL
Trigger: AAGGAAGAAGTACCAAGTCAACCAAGTTCTCTCTTG...CTTGAAGAGACCAAAGCCTGTAACTGTCCAGCTTCTAATTTCAAAACGGGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR CAA 90 bp TGGACCCGTTTTGAAATTAGAAGCTGGACAGTTACAGGCTTTGGTCTCTTCAAGGTGACAAGAGAGAACTaGGTTGACTTGGTACTTCTT +
Preference number: 3 (lower is better)
Translates to: WTRFEIRSWTVTGFGLFKVTREN*VDLVLL
Trigger: AAGAAGTACCAAGTCAACCAAGTTCTCTCTTGTCAC...CTTGAAGAGACCAAAGCCTGTAACTGTCCAGCTTCTAATTTCAAAACGGGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR CAA 90 bp CGCCCTGAAAACTTGCAAGGGCTAATACTCTATGATAGAATATTACTACTGTTCGCAATAAAACCAGGTTaGCAGCGAAGGTCCTGGCTT +
Preference number: 3 (lower is better)
Translates to: RPENLQGLILYDRILLLFAIKPG*QRRSWL
Trigger: AAGCCAGGACCTTCGCTGCAAACCTGGTTTTATTGC...GAACAGTAGTAATATTCTATCATAGAGTATTAGCCCTTGCAAGTTTTCAGGGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR CAA 90 bp GTTAATACATTTACTTACTACCATACACCTGAACAGTCACGGCAGAACAAGAGCTGGGGTTTCACCATGTaGGTCAAGCTGGTCTTAAAC +
Preference number: 3 (lower is better)
Translates to: VNTFTYYHTPEQSRQNKSWGFTM*VKLVLN
Trigger: GTTTAAGACCAGCTTGACCAACATGGTGAAACCCCA...GCTCTTGTTCTGCCGTGACTGTTCAGGTGTATGGTAGTAAGTAAATGTATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR-3UTR CAA 90 bp ACATGCACAGGAATTTCTTCCACTTCTAACCTCGCTCATCAGTCACATTTACAACTTGGTACTTCTTCCTaGTTCTTTCAACTCCTCAGT +
Preference number: 3 (lower is better)
Translates to: TCTGISSTSNLAHQSHLQLGTSS*FFQLLS
Trigger: ACTGAGGAGTTGAAAGAACAAGGAAGAAGTACCAAG...TTGTAAATGTGACTGATGAGCGAGGTTAGAAGTGGAAGAAATTCCTGTGCATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS-3UTR CCA 90 bp ATGCCAGGGCCTGCAGAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGTGGGAGCGGGGTTCTTaGCAGACACCCAGGCCACGG +
Preference number: 4 (lower is better)
Translates to: MPGPAEVADHSEEGARRGWERGS*QTPRPR
Trigger: CCGTGGCCTGGGTGTCTGCCAAGAACCCCGCTCCCA...CCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTCTGCAGGCCCTGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp ATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCAGAGGTCGCTGACCGCCTGCAGAGGTCGCTaGCCATTCCGAGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: MAGPPSSSKCQGLQRSLTACRGR*PFRGGS
Trigger: GCTCCCTCCTCGGAATGGTCAGCGACCTCTGCAGGC...GGTCAGCGACCTCTGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp ATGCCAGGGCCTGCAGAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGGCGGTACGGGCCCAGTaGGGAGAGGACCCCATTCAA +
Preference number: 4 (lower is better)
Translates to: MPGPAEVADHSEEGARRGAVRAQ*GEDPIQ
Trigger: TTGAATGGGGTCCTCTCCCCACTGGGCCCGTACCGC...CCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTCTGCAGGCCCTGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp GGAAGGCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGTGGGCTCTCGGCTTCTaGCCGGGCATCCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRREEEYGRATQLFQMPGWALGF*PGILRW
Trigger: CCACCTCAGGATGCCCGGGCAGAAGCCGAGAGCCCA...CCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGCCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp TTACACGAGAGGAAGGCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCAGCGAGAAGCCGAGGTTaGCGTCGCAGCGCGCGCCTG +
Preference number: 4 (lower is better)
Translates to: LHERKAGGRIWQGHPALPARSRG*RRSARL
Trigger: CAGGCGCGCGCTGCGACGCCAACCTCGGCTTCTCGC...TGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGCCTTCCTCTCGTGTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS-3UTR CCA 90 bp CCAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGCACCTCAGAGGCGCCTCCTaGGCTCTCGGCTTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PIHPWVSLGTHPRRTSMHLRGAS*ALGFCP
Trigger: CGGGCAGAAGCCGAGAGCCCAGGAGGCGCCTCTGAG...GTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp GAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGGGAGAAAAGCTGAACTGGGAGCGGGGTTCTTaGCAGACACCCAGGCCACGG +
Preference number: 4 (lower is better)
Translates to: EVADHSEEGARRGGEKLNWERGS*QTPRPR
Trigger: CCGTGGCCTGGGTGTCTGCCAAGAACCCCGCTCCCA...GTTCAGCTTTTCTCCCCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp ATGCCAGGGCCTGCAGAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGTCCCCACAGGATTCCTaGGAGGGCTCATCCCAAATG +
Preference number: 4 (lower is better)
Translates to: MPGPAEVADHSEEGARRGSPQDS*EGSSQM
Trigger: CATTTGGGATGAGCCCTCTCAGGAATCCTGTGGGGA...CCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTCTGCAGGCCCTGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp CCTGCCTCCGAAGAGAAGGTGAGTAGAGAAGGCGGTGAAACGGCAGGCCTGGTACCACATCCTCCCAGGTaGGCCCCTCGGCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: PASEEKVSREGGETAGLVPHPPR*APRHPG
Trigger: TCCTGGATGCCGAGGGGCGCACCTGGGAGGATGTGG...TACCAGGCCTGCCGTTTCACCGCCTTCTCTACTCACCTTCTCTTCGGAGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp ATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCAGAGGTCGCTGACCTCCCCACAGGATTCCTaGGAGGGCTCATCCCAAATG +
Preference number: 4 (lower is better)
Translates to: MAGPPSSSKCQGLQRSLTSPQDS*EGSSQM
Trigger: CATTTGGGATGAGCCCTCTCAGGAATCCTGTGGGGA...GGTCAGCGACCTCTGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp TATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCAGAGGTCGCTGACGGAGACGCAGTGGAATaGAGCCGTTTCCCAGTCGCT +
Preference number: 4 (lower is better)
Translates to: YGRATQLFQMPGPAEVADGDAVE*SRFPVA
Trigger: AGCGACTGGGAAACGGCTGCATTCCACTGCGTCTCC...GTCAGCGACCTCTGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS-3UTR CCA 90 bp CCTGCCTCCGAAGAGAAGGTGAGTAGAGAAGGCGGTGAAACGGCAGGCCTGGTAGCGGTACGGGCCCAGTaGGGAGAGGACCCCATTCAA +
Preference number: 4 (lower is better)
Translates to: PASEEKVSREGGETAGLVAVRAQ*GEDPIQ
Trigger: TTGAATGGGGTCCTCTCCCCACTGGGCCCGTACCGC...TACCAGGCCTGCCGTTTCACCGCCTTCTCTACTCACCTTCTCTTCGGAGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp TATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCAGAGGTCGCTGACGACACCACCCCTTCCTaGGAATTCACGGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: YGRATQLFQMPGPAEVADDTTPS*EFTGDG
Trigger: ACCATCCCCCGTGAATTCCCAGGAAGGGGTGGTGTC...GTCAGCGACCTCTGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp GCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCCCTGAGGTGGCTCTCTaGGACCCTTCCAGGCACATT +
Preference number: 4 (lower is better)
Translates to: AGGRIWQGHPALPNARACPEVAL*DPSRHI
Trigger: AATGTGCCTGGAAGGGTCCCAGAGAGCCACCTCAGG...GCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp GCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCGCGGGAGGAAGAATATaGCAGGGCCACCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: AGGRIWQGHPALPNARACAGGRI*QGHPAL
Trigger: AAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGC...GCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp ATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCAGAGGTCGCTGACCGGTTTGGTAGGCTCATaGTGGTCTTCCGTGGCATTC +
Preference number: 4 (lower is better)
Translates to: MAGPPSSSKCQGLQRSLTGLVGS*WSSVAF
Trigger: GAATGCCACGGAAGACCAGCATGAGCCTACCAAACC...GGTCAGCGACCTCTGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp ATGCCAGGGCCTGCAGAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGTTATCTCAGGGACCCTaGTCTCTCCTCTACACATGC +
Preference number: 4 (lower is better)
Translates to: MPGPAEVADHSEEGARRGLSQGP*SLLYTC
Trigger: GCATGTGTAGAGGAGAGAGCAGGGTCCCTGAGATAA...CCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTCTGCAGGCCCTGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp GAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGGGAGAAAAGCTGAACGCCAAGGAGACGCAGTaGAATGCAGCCGTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: EVADHSEEGARRGGEKLNAKETQ*NAAVSQ
Trigger: CTGGGAAACGGCTGCATTCCACTGCGTCTCCTTGGC...GTTCAGCTTTTCTCCCCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp GCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCCTGCCCACAGTCCTCTaGGATGCCTGTGACCAACAA +
Preference number: 4 (lower is better)
Translates to: AGGRIWQGHPALPNARACLPTVL*DACDQQ
Trigger: TTGTTGGTCACAGGCATCCCAGAGGACTGTGGGCAG...GCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp ATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCAGAGGTCGCTGACCTCTTCTTCTTCCTCATaGGAGCGGGGTTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: MAGPPSSSKCQGLQRSLTSSSSS*ERGSWQ
Trigger: CTGCCAAGAACCCCGCTCCCATGAGGAAGAAGAAGA...GGTCAGCGACCTCTGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp GCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCCCTCCGAAGAGAAGGTaGGTAGAGAAGGCGGTGAAA +
Preference number: 4 (lower is better)
Translates to: AGGRIWQGHPALPNARACPPKRR*VEKAVK
Trigger: TTTCACCGCCTTCTCTACTCACCTTCTCTTCGGAGG...GCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp ATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCAGAGGTCGCTGACCATTCACGGGGGATGGTaGTCAGATTCACACCTTCAC +
Preference number: 4 (lower is better)
Translates to: MAGPPSSSKCQGLQRSLTIHGGW*SDSHLH
Trigger: GTGAAGGTGTGAATCTGAGCACCATCCCCCGTGAAT...GGTCAGCGACCTCTGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp CCTGCCTCCGAAGAGAAGGTGAGTAGAGAAGGCGGTGAAACGGCAGGCCTGGTAGCCAAGGAGACGCAGTaGAATGCAGCCGTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PASEEKVSREGGETAGLVAKETQ*NAAVSQ
Trigger: CTGGGAAACGGCTGCATTCCACTGCGTCTCCTTGGC...TACCAGGCCTGCCGTTTCACCGCCTTCTCTACTCACCTTCTCTTCGGAGGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp GAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGGGAGAAAAGCTGAACTTCTGCCCAGTTCTCTaGGGGCTGATGCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: EVADHSEEGARRGGEKLNFCPVL*GLMLVL
Trigger: CAGAACCAGCATCAGCCCCCAGAGAACTGGGCAGAA...GTTCAGCTTTTCTCCCCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp GGAAGGCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCATGCTGGTCTTCCGTaGCATTCCAGTTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GRREEEYGRATQLFQMPGHAGLP*HSSCWG
Trigger: CCCCCAACAACTGGAATGCCACGGAAGACCAGCATG...CCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp GAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGGGAGAAAAGCTGAACCATGCTGGTCTTCCGTaGCATTCCAGTTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: EVADHSEEGARRGGEKLNHAGLP*HSSCWG
Trigger: CCCCCAACAACTGGAATGCCACGGAAGACCAGCATG...GTTCAGCTTTTCTCCCCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp GAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGGGAGAAAAGCTGAACTTGCAGCGAAGGTCCTaGCTTAACTTACCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: EVADHSEEGARRGGEKLNLQRRS*LNLPRW
Trigger: CCAGCGGGGTAAGTTAAGCCAGGACCTTCGCTGCAA...GTTCAGCTTTTCTCCCCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp GAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGGGAGAAAAGCTGAACCCTCCGAAGAGAAGGTaGGTAGAGAAGGCGGTGAAA +
Preference number: 4 (lower is better)
Translates to: EVADHSEEGARRGGEKLNPPKRR*VEKAVK
Trigger: TTTCACCGCCTTCTCTACTCACCTTCTCTTCGGAGG...GTTCAGCTTTTCTCCCCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp ATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCAGAGGTCGCTGACCGTGGGGGAGAAAAGCTaGACATGGATGAGTGTAACA +
Preference number: 4 (lower is better)
Translates to: MAGPPSSSKCQGLQRSLTVGEKS*TWMSVT
Trigger: TGTTACACTCATCCATGTTCAGCTTTTCTCCCCCAC...GGTCAGCGACCTCTGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp ATGCCAGGGCCTGCAGAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGCCTCTTACTATAATGTaGGTAGTGACCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: MPGPAEVADHSEEGARRGPLTIM*VVTFCC
Trigger: GCAGCAGAAGGTCACTACTCACATTATAGTAAGAGG...CCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTCTGCAGGCCCTGGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp CGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCACCACTTCCATTCCCCTaGACCAATCCTCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: REEEYGRATQLFQMPGPAPLPFP*TNPPEG
Trigger: ACCTTCTGGAGGATTGGTGCAGGGGAATGGAAGTGG...TGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp GCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCATTCACGGGGGATGGTaGTCAGATTCACACCTTCAC +
Preference number: 4 (lower is better)
Translates to: AGGRIWQGHPALPNARACIHGGW*SDSHLH
Trigger: GTGAAGGTGTGAATCTGAGCACCATCCCCCGTGAAT...GCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp GCGCACGCAAACACACACACACACACACACAATGACACATGGTGGTCTGGTCTACCACATCCTCCCAGGTaGGCCCCTCGGCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: AHANTHTHTHNDTWWSGLPHPPR*APRHPG
Trigger: TCCTGGATGCCGAGGGGCGCACCTGGGAGGATGTGG...TAGACCAGACCACCATGTGTCATTGTGTGTGTGTGTGTGTGTGTTTGCGTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp CCCTCCCACCCAAGACCTCACCTATCGTTTACCTCAGGGCCAGATCTCTATCAATGGCTTCCTCCCGGCTaGGGATCTCGGCATCCATGC +
Preference number: 4 (lower is better)
Translates to: PSHPRPHLSFTSGPDLYQWLPPG*GSRHPC
Trigger: GCATGGATGCCGAGATCCGCAGCCGGGAGGAAGCCA...TTGATAGAGATCTGGCCCTGAGGTAAACGATAGGTGAGGTCTTGGGTGGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp GCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCGGACCTAGGAATGCCTaGGTCCTTCCCTATAATCAC +
Preference number: 4 (lower is better)
Translates to: AGGRIWQGHPALPNARACGPRNA*VLPYNH
Trigger: GTGATTATAGGGAAGGACGCAGGCATTCCTAGGTCC...GCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp GAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGGGAGAAAAGCTGAACTTGGTAGGCTCATGCTaGTCTTCCGTGGCATTCCAG +
Preference number: 4 (lower is better)
Translates to: EVADHSEEGARRGGEKLNLVGSC*SSVAFQ
Trigger: CTGGAATGCCACGGAAGACCAGCATGAGCCTACCAA...GTTCAGCTTTTCTCCCCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp GCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCGCACTGCTTCCTGCCTaGAGTTCTTCTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: AGGRIWQGHPALPNARACALLPA*SSSSAS
Trigger: AGAAGCAGAAGAAGAACTCCAGGCAGGAAGCAGTGC...GCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp CCTGCCTCCGAAGAGAAGGTGAGTAGAGAAGGCGGTGAAACGGCAGGCCTGGTAGCCTGGCCCTTTCTTTaGCATCACCGGCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PASEEKVSREGGETAGLVAWPFL*HHRLLP
Trigger: AGGAAGAAGCCGGTGATGCCAAAGAAAGGGCCAGGC...TACCAGGCCTGCCGTTTCACCGCCTTCTCTACTCACCTTCTCTTCGGAGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS-3UTR CCA 90 bp GAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGGGAGAAAAGCTGAACCTTAACTTACCCCGCTaGTTACACGAGAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: EVADHSEEGARRGGEKLNLNLPR*LHERKA
Trigger: CGCCTTCCTCTCGTGTAACCAGCGGGGTAAGTTAAG...GTTCAGCTTTTCTCCCCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp GGAAGGCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCTTCCTGCCATCTTCTaGGTCAACCAAGACGTAGGA +
Preference number: 4 (lower is better)
Translates to: GRREEEYGRATQLFQMPGLPAIF*VNQDVG
Trigger: TCCTACGTCTTGGTTGACTCAGAAGATGGCAGGAAG...CCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS-3UTR TCA 90 bp AACTCCCTCCCACCCAAGACCTCACCTATCGTTTACCTCAGGGCCAGATCTCTACCCCGAGGGGCCTTCTaGTCTGATGCCTCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: NSLPPKTSPIVYLRARSLPRGAF*SDASLL
Trigger: AAGAAGGGAGGCATCAGATCAGAAGGCCCCTCGGGG...TAGAGATCTGGCCCTGAGGTAAACGATAGGTGAGGTCTTGGGTGGGAGGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS-3UTR TCA 90 bp GCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCCTGCTGCAAAGATGGTaGCAGTTTGGTGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: AGGRIWQGHPALPNARACLLQRW*QFGAKM
Trigger: CATCTTTGCACCAAACTGTCACCATCTTTGCAGCAG...GCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp CCTGCCTCCGAAGAGAAGGTGAGTAGAGAAGGCGGTGAAACGGCAGGCCTGGTATCCTCAATTTCTGCCTaGCCACAGTCCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: PASEEKVSREGGETAGLVSSISA*PQSSGM
Trigger: CATCCCAGAGGACTGTGGGCAGGCAGAAATTGAGGA...TACCAGGCCTGCCGTTTCACCGCCTTCTCTACTCACCTTCTCTTCGGAGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp GCGCACGCAAACACACACACACACACACACAATGACACATGGTGGTCTGGTCTACACCCCCAGAGCTTCTaGCCAGTTCTCTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: AHANTHTHTHNDTWWSGLHPQSF*PVLWGL
Trigger: CAGCCCCCAGAGAACTGGGCAGAAGCTCTGGGGGTG...TAGACCAGACCACCATGTGTCATTGTGTGTGTGTGTGTGTGTGTTTGCGTGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp GAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGGGAGAAAAGCTGAACATGCAGAAGATGATCTaGACCACTGCTCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: EVADHSEEGARRGGEKLNMQKMI*TTAPRS
Trigger: GCTTCTGGGAGCAGTGGTGCAGATCATCTTCTGCAT...GTTCAGCTTTTCTCCCCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp CCAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGCACTCTTCTTCTTCCTCATaGGAGCGGGGTTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PIHPWVSLGTHPRRTSMHSSSSS*ERGSWQ
Trigger: CTGCCAAGAACCCCGCTCCCATGAGGAAGAAGAAGA...GTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp GGTTACACGAGAGGAAGGCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCTTCTGGATTCATTGGTaGCACGCCGAGGAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: GYTRGRREEEYGRATQLFFWIHW*HAEESL
Trigger: AAGGCTCTCCTCGGCGTGCCACCAATGAATCCAGAA...GAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGCCTTCCTCTCGTGTAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS-3UTR TCA 90 bp ACAGGGGCCCTAAGAGAGTCCAAAGTCTTATTCAGTGACAAGAGAGAACTTGGTTCTGCCCGGGCATCCTaGGGTGGCTCTCTGGGACCC +
Preference number: 4 (lower is better)
Translates to: TGALRESKVLFSDKRELGSARAS*GGSLGP
Trigger: GGGTCCCAGAGAGCCACCTCAGGATGCCCGGGCAGA...ACCAAGTTCTCTCTTGTCACTGAATAAGACTTTGGACTCTCTTAGGGCCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp ATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCAGAGGTCGCTGACCCAGAACAAGAGCATGTaGATGACGAAAGGAAACTTG +
Preference number: 4 (lower is better)
Translates to: MAGPPSSSKCQGLQRSLTQNKSM*MTKGNL
Trigger: CAAGTTTCCTTTCGTCATTCACATGCTCTTGTTCTG...GGTCAGCGACCTCTGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp CCAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGCACTCACCGGCTTCTTCCTaGCATCTTCTGAGTCAACCA +
Preference number: 4 (lower is better)
Translates to: PIHPWVSLGTHPRRTSMHSPASS*HLLSQP
Trigger: TGGTTGACTCAGAAGATGGCAGGAAGAAGCCGGTGA...GTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS-3UTR CCA 90 bp CAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGCACACTTAACTTACCCCGCTaGTTACACGAGAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: QFTPGFRLAHTPGERRCTLNLPR*LHERKA
Trigger: CGCCTTCCTCTCGTGTAACCAGCGGGGTAAGTTAAG...TGTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp GGTTACACGAGAGGAAGGCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCTCCTGGCTAGATAACTaGAGGATGGAAGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GYTRGRREEEYGRATQLFSWLDN*RMEAGD
Trigger: GTCTCCAGCTTCCATCCTCCAGTTATCTAGCCAGGA...GAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGCCTTCCTCTCGTGTAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp CCTGCCTCCGAAGAGAAGGTGAGTAGAGAAGGCGGTGAAACGGCAGGCCTGGTAACTCTTGGGACCTCCTaGCTAGATAACTGGAGGATG +
Preference number: 4 (lower is better)
Translates to: PASEEKVSREGGETAGLVTLGTS*LDNWRM
Trigger: CATCCTCCAGTTATCTAGCCAGGAGGTCCCAAGAGT...TACCAGGCCTGCCGTTTCACCGCCTTCTCTACTCACCTTCTCTTCGGAGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp ACCTCACCTATCGTTTACCTCAGGGCCAGATCTCTATCAACAGGGGCCCTAAGAGCCCTTGATCGGCTCTaGGATCGCCATGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: TSPIVYLRARSLSTGALRALDRL*DRHAFS
Trigger: GCTGAAAGCATGGCGATCTCAGAGCCGATCAAGGGC...TCTTAGGGCCCCTGTTGATAGAGATCTGGCCCTGAGGTAAACGATAGGTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp ATGCCAGGGCCTGCAGAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGGACTTCCAACATATCTaGGTAGTCACTTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: MPGPAEVADHSEEGARRGDFQHI*VVTFQF
Trigger: AAACTGAAAAGTGACTACTCAGATATGTTGGAAGTC...CCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTCTGCAGGCCCTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp ATGCCAGGGCCTGCAGAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGACTCACTCAGGATTTTaGAATGAATCATCACGAGAA +
Preference number: 4 (lower is better)
Translates to: MPGPAEVADHSEEGARRGTHSGF*NESSRE
Trigger: TTCTCGTGATGATTCATTTCAAAATCCTGAGTGAGT...CCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTCTGCAGGCCCTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp TTACACGAGAGGAAGGCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCATCTTACCAACTCTCCTaGCTCCGAAGAGAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LHERKAGGRIWQGHPALPSYQLS*LRREGE
Trigger: CTCACCTTCTCTTCGGAGGCAGGAGAGTTGGTAAGA...TGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGCCTTCCTCTCGTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp CCAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGCACGCTCATTGCAACCTCTaGCTCCTGGATTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: PIHPWVSLGTHPRRTSMHAHCNL*LLDSSN
Trigger: ATTGCTTGAATCCAGGAGGCAGAGGTTGCAATGAGC...GTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp CCAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGCACACACAGCTGTGTAGCTaGAAACGGAAACCACTCTCT +
Preference number: 4 (lower is better)
Translates to: PIHPWVSLGTHPRRTSMHTQLCS*KRKPLS
Trigger: AGAGAGTGGTTTCCGTTTGCAGCTACACAGCTGTGT...GTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp AACTCCCTCCCACCCAAGACCTCACCTATCGTTTACCTCAGGGCCAGATCTCTACTGCCCACAGTCCTCTaGGATGCCTGTGACCAACAA +
Preference number: 4 (lower is better)
Translates to: NSLPPKTSPIVYLRARSLLPTVL*DACDQQ
Trigger: TTGTTGGTCACAGGCATCCCAGAGGACTGTGGGCAG...TAGAGATCTGGCCCTGAGGTAAACGATAGGTGAGGTCTTGGGTGGGAGGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp ACGATACAGTTTGGAAACCATTATCTCAGGGACCCTGCTCTCTCCTCTACACATTGGGACAGGGTGGGGTaGTTGAGCTGGAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: TIQFGNHYLRDPALSSTHWDRVG*LSWSRR
Trigger: CCGCCTGCTCCAGCTCAACCACCCCACCCTGTCCCA...ATGTGTAGAGGAGAGAGCAGGGTCCCTGAGATAATGGTTTCCAAACTGTATCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp TTACACGAGAGGAAGGCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCAGCACTGCTTCCTGCCTaGAGTTCTTCTTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LHERKAGGRIWQGHPALPALLPA*SSSSAS
Trigger: AGAAGCAGAAGAAGAACTCCAGGCAGGAAGCAGTGC...TGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGCCTTCCTCTCGTGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp AACTCCCTCCCACCCAAGACCTCACCTATCGTTTACCTCAGGGCCAGATCTCTACACGGCCTTCTTCTTTaGTGGGCTTTCATGGCCACC +
Preference number: 4 (lower is better)
Translates to: NSLPPKTSPIVYLRARSLHGLLL*WAFMAT
Trigger: GGTGGCCATGAAAGCCCACCAAAGAAGAAGGCCGTG...TAGAGATCTGGCCCTGAGGTAAACGATAGGTGAGGTCTTGGGTGGGAGGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp TATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCAGAGGTCGCTGACGGCTACGATACAGTTTaGAAACCATTATCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: YGRATQLFQMPGPAEVADGYDTV*KPLSQG
Trigger: TCCCTGAGATAATGGTTTCCAAACTGTATCGTAGCC...GTCAGCGACCTCTGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR CAA 72 bp GTCTCTTCAAGAATCCAATTCACCCCTGGGTTTCGCTaGGCACACACCCCAGGAGAACGTCGATGCACACAG +
Preference number: 4 (lower is better)
Translates to: VSSRIQFTPGFR*AHTPGERRCTQ
Trigger: CTGTGTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTGGATTCTTGAAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp CCTGCCTCCGAAGAGAAGGTGAGTAGAGAAGGCGGTGAAACGGCAGGCCTGGTACCTCTTACTATAATGTaGGTAGTGACCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PASEEKVSREGGETAGLVPLTIM*VVTFCC
Trigger: GCAGCAGAAGGTCACTACTCACATTATAGTAAGAGG...TACCAGGCCTGCCGTTTCACCGCCTTCTCTACTCACCTTCTCTTCGGAGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp CCAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGCACGTAGTGACCTTCTGCTaGAAAGATGGTGACAGTTTG +
Preference number: 4 (lower is better)
Translates to: PIHPWVSLGTHPRRTSMHVVTFC*KDGDSL
Trigger: CAAACTGTCACCATCTTTGCAGCAGAAGGTCACTAC...GTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp AATCCAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGTTATCTCAGGGACCCTaGTCTCTCCTCTACACATGC +
Preference number: 4 (lower is better)
Translates to: NPIHPWVSLGTHPRRTSMLSQGP*SLLYTC
Trigger: GCATGTGTAGAGGAGAGAGCAGGGTCCCTGAGATAA...CATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp CAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGCACAACACAGCTGTGTAGCTaGAAACGGAAACCACTCTCT +
Preference number: 4 (lower is better)
Translates to: QFTPGFRLAHTPGERRCTTQLCS*KRKPLS
Trigger: AGAGAGTGGTTTCCGTTTGCAGCTACACAGCTGTGT...TGTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp CCCGTTTTGAAATTAGAAGCTGGACAGTTACAGGCTTTGGTCTCTTCAAGAATCCTCAGAGGCGCCTCCTaGGCTCTCGGCTTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PVLKLEAGQLQALVSSRILRGAS*ALGFCP
Trigger: CGGGCAGAAGCCGAGAGCCCAGGAGGCGCCTCTGAG...GATTCTTGAAGAGACCAAAGCCTGTAACTGTCCAGCTTCTAATTTCAAAACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp ACCTCACCTATCGTTTACCTCAGGGCCAGATCTCTATCAACAGGGGCCCTAAGATCATGGCCACCATCTTaGTCTGACTCAGAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: TSPIVYLRARSLSTGALRSWPPS*SDSEAP
Trigger: AGGCGCCTCTGAGTCAGACCAAGATGGTGGCCATGA...TCTTAGGGCCCCTGTTGATAGAGATCTGGCCCTGAGGTAAACGATAGGTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp AACTCCCTCCCACCCAAGACCTCACCTATCGTTTACCTCAGGGCCAGATCTCTAGGCCTTCTTCTTTGGTaGGCTTTCATGGCCACCATC +
Preference number: 4 (lower is better)
Translates to: NSLPPKTSPIVYLRARSLGLLLW*AFMATI
Trigger: GATGGTGGCCATGAAAGCCCACCAAAGAAGAAGGCC...TAGAGATCTGGCCCTGAGGTAAACGATAGGTGAGGTCTTGGGTGGGAGGGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp GAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGGGAGAAAAGCTGAACAGGGCTCATCCCAAATaGGAATCAAAGTGCCATTTT +
Preference number: 4 (lower is better)
Translates to: EVADHSEEGARRGGEKLNRAHPK*ESKCHF
Trigger: AAAATGGCACTTTGATTCCCATTTGGGATGAGCCCT...GTTCAGCTTTTCTCCCCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp TATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCAGAGGTCGCTGACGACAGTTACAGGCTTTaGTCTCTTCAAGAATCCAAT +
Preference number: 4 (lower is better)
Translates to: YGRATQLFQMPGPAEVADDSYRL*SLQESN
Trigger: ATTGGATTCTTGAAGAGACCAAAGCCTGTAACTGTC...GTCAGCGACCTCTGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp ATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCAGAGGTCGCTGACCTTTGAAATTAGAAGCTaGACAGTTACAGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: MAGPPSSSKCQGLQRSLTFEIRS*TVTGFG
Trigger: ACCAAAGCCTGTAACTGTCCAGCTTCTAATTTCAAA...GGTCAGCGACCTCTGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR CAA 72 bp TGGAAGCTGGAGACTGAAGGAGCAATAAAACCAGGTTaGCAGCGAAGGTCCTGGCTTAACTTACCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: WKLETEGAIKPG*QRRSWLNLPRW
Trigger: CCAGCGGGGTAAGTTAAGCCAGGACCTTCGCTGCAAACCTGGTTTTATTGCTCCTTCAGTCTCCAGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp GAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGGGAGAAAAGCTGAACAAAACTCAAAGACTTTaGGGTCTAGGCAGACATTCT +
Preference number: 4 (lower is better)
Translates to: EVADHSEEGARRGGEKLNKTQRL*GLGRHS
Trigger: AGAATGTCTGCCTAGACCTCAAAGTCTTTGAGTTTT...GTTCAGCTTTTCTCCCCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp ACCTCACCTATCGTTTACCTCAGGGCCAGATCTCTATCAACAGGGGCCCTAAGAGGTTTGGTAGGCTCATaGTGGTCTTCCGTGGCATTC +
Preference number: 4 (lower is better)
Translates to: TSPIVYLRARSLSTGALRGLVGS*WSSVAF
Trigger: GAATGCCACGGAAGACCAGCATGAGCCTACCAAACC...TCTTAGGGCCCCTGTTGATAGAGATCTGGCCCTGAGGTAAACGATAGGTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp ACCTCACCTATCGTTTACCTCAGGGCCAGATCTCTATCAACAGGGGCCCTAAGAGCTCTGAGATCGCCATaGTTTCAGCATCACCCACCT +
Preference number: 4 (lower is better)
Translates to: TSPIVYLRARSLSTGALRALRSP*FQHHPP
Trigger: AGGTGGGTGATGCTGAAAGCATGGCGATCTCAGAGC...TCTTAGGGCCCCTGTTGATAGAGATCTGGCCCTGAGGTAAACGATAGGTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp AATGGACCCGTTTTGAAATTAGAAGCTGGACAGTTACAGGCTTTGGTCTCTTCATGGGACAGGGTGGGGTaGTTGAGCTGGAGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: NGPVLKLEAGQLQALVSSWDRVG*LSWSRR
Trigger: CCGCCTGCTCCAGCTCAACCACCCCACCCTGTCCCA...TGAAGAGACCAAAGCCTGTAACTGTCCAGCTTCTAATTTCAAAACGGGTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp CCAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGCACCAAAGTCTTATTCAGTaGCAAGAGAGAACTTGGTTG +
Preference number: 4 (lower is better)
Translates to: PIHPWVSLGTHPRRTSMHQSLIQ*QERTWL
Trigger: CAACCAAGTTCTCTCTTGTCACTGAATAAGACTTTG...GTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp CCCTCCCACCCAAGACCTCACCTATCGTTTACCTCAGGGCCAGATCTCTATCAAGTGGGGGAGAAAAGCTaGACATGGATGAGTGTAACA +
Preference number: 4 (lower is better)
Translates to: PSHPRPHLSFTSGPDLYQVGEKS*TWMSVT
Trigger: TGTTACACTCATCCATGTTCAGCTTTTCTCCCCCAC...TTGATAGAGATCTGGCCCTGAGGTAAACGATAGGTGAGGTCTTGGGTGGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp CACCATGTTAATACATTTACTTACTACCATACACCTGAACAGTCACGGCAGAACTGGGCTCTCGGCTTCTaGCCGGGCATCCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HHVNTFTYYHTPEQSRQNWALGF*PGILRW
Trigger: CCACCTCAGGATGCCCGGGCAGAAGCCGAGAGCCCA...GTTCTGCCGTGACTGTTCAGGTGTATGGTAGTAAGTAAATGTATTAACATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp GCGCACGCAAACACACACACACACACACACAATGACACATGGTGGTCTGGTCTATGGCATTCCAGTTGTTaGGGGTCTCTGCCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: AHANTHTHTHNDTWWSGLWHSSC*GSLPLR
Trigger: CCTTAAAGGCAGAGACCCCCAACAACTGGAATGCCA...TAGACCAGACCACCATGTGTCATTGTGTGTGTGTGTGTGTGTGTTTGCGTGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp ACCTCACCTATCGTTTACCTCAGGGCCAGATCTCTATCAACAGGGGCCCTAAGATGGCATTCCAGTTGTTaGGGGTCTCTGCCTTTAAGG +
Preference number: 4 (lower is better)
Translates to: TSPIVYLRARSLSTGALRWHSSC*GSLPLR
Trigger: CCTTAAAGGCAGAGACCCCCAACAACTGGAATGCCA...TCTTAGGGCCCCTGTTGATAGAGATCTGGCCCTGAGGTAAACGATAGGTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp ACCTCACCTATCGTTTACCTCAGGGCCAGATCTCTATCAACAGGGGCCCTAAGATTTGGTGGGCTTTCATaGCCACCATCTTGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: TSPIVYLRARSLSTGALRFGGLS*PPSWSD
Trigger: GTCAGACCAAGATGGTGGCCATGAAAGCCCACCAAA...TCTTAGGGCCCCTGTTGATAGAGATCTGGCCCTGAGGTAAACGATAGGTGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp CGATACAGTTTGGAAACCATTATCTCAGGGACCCTGCTCTCTCCTCTACACATGCACGGCCTTCTTCTTTaGTGGGCTTTCATGGCCACC +
Preference number: 4 (lower is better)
Translates to: RYSLETIISGTLLSPLHMHGLLL*WAFMAT
Trigger: GGTGGCCATGAAAGCCCACCAAAGAAGAAGGCCGTG...CATGTGTAGAGGAGAGAGCAGGGTCCCTGAGATAATGGTTTCCAAACTGTATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp CGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCAAGAACTTGGTTGACTTaGTACTTCTTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: REEEYGRATQLFQMPGPARTWLT*YFFLVL
Trigger: AAGAACAAGGAAGAAGTACCAAGTCAACCAAGTTCT...TGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp TACCCCGCTGGTTACACGAGAGGAAGGCGGGAGGAAGAATATGGCAGGGCCACCTTTGAAATTAGAAGCTaGACAGTTACAGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: YPAGYTRGRREEEYGRATFEIRS*TVTGFG
Trigger: ACCAAAGCCTGTAACTGTCCAGCTTCTAATTTCAAA...GGTGGCCCTGCCATATTCTTCCTCCCGCCTTCCTCTCGTGTAACCAGCGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp CCCGTTTTGAAATTAGAAGCTGGACAGTTACAGGCTTTGGTCTCTTCAAGAATCCAGTTCTCTGGGGGCTaGTGCTGGTTCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: PVLKLEAGQLQALVSSRIQFSGG*CWFWDR
Trigger: CCTGTCCCAGAACCAGCATCAGCCCCCAGAGAACTG...GATTCTTGAAGAGACCAAAGCCTGTAACTGTCCAGCTTCTAATTTCAAAACGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp ACATGCACAGGAATTTCTTCCACTTCTAACCTCGCTCATCAGTCACATTTACAAGCCACCATCTTGGTCTaGCTCAGAGGCGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TCTGISSTSNLAHQSHLQATILV*LRGASW
Trigger: CCAGGAGGCGCCTCTGAGTCAGACCAAGATGGTGGC...TTGTAAATGTGACTGATGAGCGAGGTTAGAAGTGGAAGAAATTCCTGTGCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp TACACGTTTACATTTACTAGTCATGGTGTCAACTTGTTAACACAACGAAGCCCTGCCTGCAGAGGTCGCTaGCCATTCCGAGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: YTFTFTSHGVNLLTQRSPACRGR*PFRGGS
Trigger: GCTCCCTCCTCGGAATGGTCAGCGACCTCTGCAGGC...AGGGCTTCGTTGTGTTAACAAGTTGACACCATGACTAGTAAATGTAAACGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp CGATACAGTTTGGAAACCATTATCTCAGGGACCCTGCTCTCTCCTCTACACATGAGAACCCACCTCTGCTaGAAGCCCCGGTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: RYSLETIISGTLLSPLHMRTHLC*KPRFFL
Trigger: AAGAAAGAACCGGGGCTTGCAGCAGAGGTGGGTTCT...CATGTGTAGAGGAGAGAGCAGGGTCCCTGAGATAATGGTTTCCAAACTGTATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp ACCTCACCTATCGTTTACCTCAGGGCCAGATCTCTATCAACAGGGGCCCTAAGAGCTCATTGCAACCTCTaGCTCCTGGATTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: TSPIVYLRARSLSTGALRAHCNL*LLDSSN
Trigger: ATTGCTTGAATCCAGGAGGCAGAGGTTGCAATGAGC...TCTTAGGGCCCCTGTTGATAGAGATCTGGCCCTGAGGTAAACGATAGGTGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp AGAAAAATAGATTTGGATTACATCTTTGTGGACGGCTACGATACAGTTTGGAAACCGTTTCCCAGTCGCTaGCTCCGGCTACCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: RKIDLDYIFVDGYDTVWKPFPSR*LRLPRR
Trigger: GCGCCGGGGTAGCCGGAGCCAGCGACTGGGAAACGG...TTTCCAAACTGTATCGTAGCCGTCCACAAAGATGTAATCCAAATCTATTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS-3UTR TCA 90 bp AAGTCTTATTCAGTGACAAGAGAGAACTTGGTTGACTTGGTACTTCTTCCTTGTGCCACCATCTTGGTCTaGCTCAGAGGCGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KSYSVTRENLVDLVLLPCATILV*LRGASW
Trigger: CCAGGAGGCGCCTCTGAGTCAGACCAAGATGGTGGC...ACAAGGAAGAAGTACCAAGTCAACCAAGTTCTCTCTTGTCACTGAATAAGACTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp TACACGTTTACATTTACTAGTCATGGTGTCAACTTGTTAACACAACGAAGCCCTTGGCTTCCTCCCGGCTaGGGATCTCGGCATCCATGC +
Preference number: 4 (lower is better)
Translates to: YTFTFTSHGVNLLTQRSPWLPPG*GSRHPC
Trigger: GCATGGATGCCGAGATCCGCAGCCGGGAGGAAGCCA...AGGGCTTCGTTGTGTTAACAAGTTGACACCATGACTAGTAAATGTAAACGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp CCCTGCTCATGCATAAAGGGGAATGAATGTTCTAGAATTTTCCCAATCCTCTTAGCCCTTGATCGGCTCTaGGATCGCCATGCTTTCAGC +
Preference number: 4 (lower is better)
Translates to: PCSCIKGNECSRIFPILLALDRL*DRHAFS
Trigger: GCTGAAAGCATGGCGATCTCAGAGCCGATCAAGGGC...TAAGAGGATTGGGAAAATTCTAGAACATTCATTCCCCTTTATGCATGAGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp CCCTCCCACCCAAGACCTCACCTATCGTTTACCTCAGGGCCAGATCTCTATCAACAAAGTCTTATTCAGTaGCAAGAGAGAACTTGGTTG +
Preference number: 4 (lower is better)
Translates to: PSHPRPHLSFTSGPDLYQQSLIQ*QERTWL
Trigger: CAACCAAGTTCTCTCTTGTCACTGAATAAGACTTTG...TTGATAGAGATCTGGCCCTGAGGTAAACGATAGGTGAGGTCTTGGGTGGGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp CGATACAGTTTGGAAACCATTATCTCAGGGACCCTGCTCTCTCCTCTACACATGTTGGTGCAAAGATGGTaGCAGTTGGGTAGATGGATG +
Preference number: 4 (lower is better)
Translates to: RYSLETIISGTLLSPLHMLVQRW*QLGRWM
Trigger: CATCCATCTACCCAACTGTCACCATCTTTGCACCAA...CATGTGTAGAGGAGAGAGCAGGGTCCCTGAGATAATGGTTTCCAAACTGTATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp ACAGGGGCCCTAAGAGAGTCCAAAGTCTTATTCAGTGACAAGAGAGAACTTGGTACCAACAAGGACCTGTaGATGTCCACTTCCATTCCC +
Preference number: 4 (lower is better)
Translates to: TGALRESKVLFSDKRELGTNKDL*MSTSIP
Trigger: GGGAATGGAAGTGGACATCCACAGGTCCTTGTTGGT...ACCAAGTTCTCTCTTGTCACTGAATAAGACTTTGGACTCTCTTAGGGCCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp CCCTGCTCATGCATAAAGGGGAATGAATGTTCTAGAATTTTCCCAATCCTCTTAGACACCACCCCTTCCTaGGAATTCACGGGGGATGGT +
Preference number: 4 (lower is better)
Translates to: PCSCIKGNECSRIFPILLDTTPS*EFTGDG
Trigger: ACCATCCCCCGTGAATTCCCAGGAAGGGGTGGTGTC...TAAGAGGATTGGGAAAATTCTAGAACATTCATTCCCCTTTATGCATGAGCAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp ACGATACAGTTTGGAAACCATTATCTCAGGGACCCTGCTCTCTCCTCTACACATTTTGGTGGGCTTTCATaGCCACCATCTTGGTCTGAC +
Preference number: 4 (lower is better)
Translates to: TIQFGNHYLRDPALSSTHFGGLS*PPSWSD
Trigger: GTCAGACCAAGATGGTGGCCATGAAAGCCCACCAAA...ATGTGTAGAGGAGAGAGCAGGGTCCCTGAGATAATGGTTTCCAAACTGTATCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp ACGATACAGTTTGGAAACCATTATCTCAGGGACCCTGCTCTCTCCTCTACACATACTCTTGGGACCTCCTaGCTAGATAACTGGAGGATG +
Preference number: 4 (lower is better)
Translates to: TIQFGNHYLRDPALSSTHTLGTS*LDNWRM
Trigger: CATCCTCCAGTTATCTAGCCAGGAGGTCCCAAGAGT...ATGTGTAGAGGAGAGAGCAGGGTCCCTGAGATAATGGTTTCCAAACTGTATCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp GCGCACGCAAACACACACACACACACACACAATGACACATGGTGGTCTGGTCTAAGGGCTCATCCCAAATaGGAATCAAAGTGCCATTTT +
Preference number: 4 (lower is better)
Translates to: AHANTHTHTHNDTWWSGLRAHPK*ESKCHF
Trigger: AAAATGGCACTTTGATTCCCATTTGGGATGAGCCCT...TAGACCAGACCACCATGTGTCATTGTGTGTGTGTGTGTGTGTGTTTGCGTGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp GCGCACGCAAACACACACACACACACACACAATGACACATGGTGGTCTGGTCTAGGCTACGATACAGTTTaGAAACCATTATCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: AHANTHTHTHNDTWWSGLGYDTV*KPLSQG
Trigger: TCCCTGAGATAATGGTTTCCAAACTGTATCGTAGCC...TAGACCAGACCACCATGTGTCATTGTGTGTGTGTGTGTGTGTGTTTGCGTGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp AACTCAAAGACTTTGAGGTCTAGGCAGACATTCTTTTTCCCTAAAACTAACTCTCAGTTCTCTGGGGGCTaGTGCTGGTTCTGGGACAGG +
Preference number: 4 (lower is better)
Translates to: NSKTLRSRQTFFFPKTNSQFSGG*CWFWDR
Trigger: CCTGTCCCAGAACCAGCATCAGCCCCCAGAGAACTG...AGAGTTAGTTTTAGGGAAAAAGAATGTCTGCCTAGACCTCAAAGTCTTTGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp ACGATACAGTTTGGAAACCATTATCTCAGGGACCCTGCTCTCTCCTCTACACATTTGGTGCAAAGATGGTaGCAGTTGGGTAGATGGATG +
Preference number: 4 (lower is better)
Translates to: TIQFGNHYLRDPALSSTHLVQRW*QLGRWM
Trigger: CATCCATCTACCCAACTGTCACCATCTTTGCACCAA...ATGTGTAGAGGAGAGAGCAGGGTCCCTGAGATAATGGTTTCCAAACTGTATCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp ACGATACAGTTTGGAAACCATTATCTCAGGGACCCTGCTCTCTCCTCTACACATCTGCTGCAAAGATGGTaGCAGTTTGGTGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: TIQFGNHYLRDPALSSTHLLQRW*QFGAKM
Trigger: CATCTTTGCACCAAACTGTCACCATCTTTGCAGCAG...ATGTGTAGAGGAGAGAGCAGGGTCCCTGAGATAATGGTTTCCAAACTGTATCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp AATGGACCCGTTTTGAAATTAGAAGCTGGACAGTTACAGGCTTTGGTCTCTTCACCACTTCCATTCCCCTaGACCAATCCTCCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: NGPVLKLEAGQLQALVSSPLPFP*TNPPEG
Trigger: ACCTTCTGGAGGATTGGTGCAGGGGAATGGAAGTGG...TGAAGAGACCAAAGCCTGTAACTGTCCAGCTTCTAATTTCAAAACGGGTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp AAGTCTTATTCAGTGACAAGAGAGAACTTGGTTGACTTGGTACTTCTTCCTTGTGATGATCTGCACCACTaGTCCCAGAAGCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: KSYSVTRENLVDLVLLPCDDLHH*SQKHPQ
Trigger: CTGGGGGTGCTTCTGGGAGCAGTGGTGCAGATCATC...ACAAGGAAGAAGTACCAAGTCAACCAAGTTCTCTCTTGTCACTGAATAAGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp ACGATACAGTTTGGAAACCATTATCTCAGGGACCCTGCTCTCTCCTCTACACATCTGGAGTTCTTCTTCTaGTTCTTTCTCCTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: TIQFGNHYLRDPALSSTHLEFFF*FFLLER
Trigger: TCGCTCCAGGAGAAAGAAGCAGAAGAAGAACTCCAG...ATGTGTAGAGGAGAGAGCAGGGTCCCTGAGATAATGGTTTCCAAACTGTATCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp GTTAATACATTTACTTACTACCATACACCTGAACAGTCACGGCAGAACAAGAGCCAGGGCACTGCTTCCTaGCTGGAGTTCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VNTFTYYHTPEQSRQNKSQGTAS*LEFFFC
Trigger: GCAGAAGAAGAACTCCAGGCAGGAAGCAGTGCCCTG...GCTCTTGTTCTGCCGTGACTGTTCAGGTGTATGGTAGTAAGTAAATGTATTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp TGGACCCGTTTTGAAATTAGAAGCTGGACAGTTACAGGCTTTGGTCTCTTCAAGGGACCTAGGAATGCCTaGGTCCTTCCCTATAATCAC +
Preference number: 4 (lower is better)
Translates to: WTRFEIRSWTVTGFGLFKGPRNA*VLPYNH
Trigger: GTGATTATAGGGAAGGACGCAGGCATTCCTAGGTCC...CTTGAAGAGACCAAAGCCTGTAACTGTCCAGCTTCTAATTTCAAAACGGGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp CGATACAGTTTGGAAACCATTATCTCAGGGACCCTGCTCTCTCCTCTACACATGGTAGTGACCTTCTGCTaGAAAGATGGTGACAGTTTG +
Preference number: 4 (lower is better)
Translates to: RYSLETIISGTLLSPLHMVVTFC*KDGDSL
Trigger: CAAACTGTCACCATCTTTGCAGCAGAAGGTCACTAC...CATGTGTAGAGGAGAGAGCAGGGTCCCTGAGATAATGGTTTCCAAACTGTATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp AAGTCTTATTCAGTGACAAGAGAGAACTTGGTTGACTTGGTACTTCTTCCTTGTCCTGAGGTGGCTCTCTaGGACCCTTCCAGGCACATT +
Preference number: 4 (lower is better)
Translates to: KSYSVTRENLVDLVLLPCPEVAL*DPSRHI
Trigger: AATGTGCCTGGAAGGGTCCCAGAGAGCCACCTCAGG...ACAAGGAAGAAGTACCAAGTCAACCAAGTTCTCTCTTGTCACTGAATAAGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp CCCTCCCACCCAAGACCTCACCTATCGTTTACCTCAGGGCCAGATCTCTATCAAAGAACTTGGTTGACTTaGTACTTCTTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: PSHPRPHLSFTSGPDLYQRTWLT*YFFLVL
Trigger: AAGAACAAGGAAGAAGTACCAAGTCAACCAAGTTCT...TTGATAGAGATCTGGCCCTGAGGTAAACGATAGGTGAGGTCTTGGGTGGGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp TGGACCCGTTTTGAAATTAGAAGCTGGACAGTTACAGGCTTTGGTCTCTTCAAGATGGAAGCTGGAGACTaGAGGAGCAATAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: WTRFEIRSWTVTGFGLFKMEAGD*RSNKTR
Trigger: CCTGGTTTTATTGCTCCTTCAGTCTCCAGCTTCCAT...CTTGAAGAGACCAAAGCCTGTAACTGTCCAGCTTCTAATTTCAAAACGGGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp CCCTGCTCATGCATAAAGGGGAATGAATGTTCTAGAATTTTCCCAATCCTCTTAGCTCTGAGATCGCCATaGTTTCAGCATCACCCACCT +
Preference number: 4 (lower is better)
Translates to: PCSCIKGNECSRIFPILLALRSP*FQHHPP
Trigger: AGGTGGGTGATGCTGAAAGCATGGCGATCTCAGAGC...TAAGAGGATTGGGAAAATTCTAGAACATTCATTCCCCTTTATGCATGAGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp TACACGTTTACATTTACTAGTCATGGTGTCAACTTGTTAACACAACGAAGCCCTTCATGGCCACCATCTTaGTCTGACTCAGAGGCGCCT +
Preference number: 4 (lower is better)
Translates to: YTFTFTSHGVNLLTQRSPSWPPS*SDSEAP
Trigger: AGGCGCCTCTGAGTCAGACCAAGATGGTGGCCATGA...AGGGCTTCGTTGTGTTAACAAGTTGACACCATGACTAGTAAATGTAAACGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp AACTCAAAGACTTTGAGGTCTAGGCAGACATTCTTTTTCCCTAAAACTAACTCTGCGGGAGGAAGAATATaGCAGGGCCACCCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: NSKTLRSRQTFFFPKTNSAGGRI*QGHPAL
Trigger: AAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGC...AGAGTTAGTTTTAGGGAAAAAGAATGTCTGCCTAGACCTCAAAGTCTTTGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp TACACGTTTACATTTACTAGTCATGGTGTCAACTTGTTAACACAACGAAGCCCTTCCTCAATTTCTGCCTaGCCACAGTCCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: YTFTFTSHGVNLLTQRSPSSISA*PQSSGM
Trigger: CATCCCAGAGGACTGTGGGCAGGCAGAAATTGAGGA...AGGGCTTCGTTGTGTTAACAAGTTGACACCATGACTAGTAAATGTAAACGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp AGAAAAATAGATTTGGATTACATCTTTGTGGACGGCTACGATACAGTTTGGAAAGATGATCTGCACCACTaGTCCCAGAAGCACCCCCAG +
Preference number: 4 (lower is better)
Translates to: RKIDLDYIFVDGYDTVWKDDLHH*SQKHPQ
Trigger: CTGGGGGTGCTTCTGGGAGCAGTGGTGCAGATCATC...TTTCCAAACTGTATCGTAGCCGTCCACAAAGATGTAATCCAAATCTATTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp AACTCAAAGACTTTGAGGTCTAGGCAGACATTCTTTTTCCCTAAAACTAACTCTCAGGGCACTGCTTCCTaGCTGGAGTTCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: NSKTLRSRQTFFFPKTNSQGTAS*LEFFFC
Trigger: GCAGAAGAAGAACTCCAGGCAGGAAGCAGTGCCCTG...AGAGTTAGTTTTAGGGAAAAAGAATGTCTGCCTAGACCTCAAAGTCTTTGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp GTTAATACATTTACTTACTACCATACACCTGAACAGTCACGGCAGAACAAGAGCTCTTACCAACTCTCCTaGCTCCGAAGAGAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: VNTFTYYHTPEQSRQNKSSYQLS*LRREGE
Trigger: CTCACCTTCTCTTCGGAGGCAGGAGAGTTGGTAAGA...GCTCTTGTTCTGCCGTGACTGTTCAGGTGTATGGTAGTAAGTAAATGTATTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp ACCTCACCTATCGTTTACCTCAGGGCCAGATCTCTATCAACAGGGGCCCTAAGATCAGATTATAGAACATaGACAGGAATTTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: TSPIVYLRARSLSTGALRSDYRT*TGISST
Trigger: AGTGGAAGAAATTCCTGTGCATGTTCTATAATCTGA...TCTTAGGGCCCCTGTTGATAGAGATCTGGCCCTGAGGTAAACGATAGGTGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp AACTCAAAGACTTTGAGGTCTAGGCAGACATTCTTTTTCCCTAAAACTAACTCTTTCTGCCCAGTTCTCTaGGGGCTGATGCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: NSKTLRSRQTFFFPKTNSFCPVL*GLMLVL
Trigger: CAGAACCAGCATCAGCCCCCAGAGAACTGGGCAGAA...AGAGTTAGTTTTAGGGAAAAAGAATGTCTGCCTAGACCTCAAAGTCTTTGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp TACACGTTTACATTTACTAGTCATGGTGTCAACTTGTTAACACAACGAAGCCCTTTGGTAGGCTCATGCTaGTCTTCCGTGGCATTCCAG +
Preference number: 4 (lower is better)
Translates to: YTFTFTSHGVNLLTQRSPLVGSC*SSVAFQ
Trigger: CTGGAATGCCACGGAAGACCAGCATGAGCCTACCAA...AGGGCTTCGTTGTGTTAACAAGTTGACACCATGACTAGTAAATGTAAACGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp AACTCAAAGACTTTGAGGTCTAGGCAGACATTCTTTTTCCCTAAAACTAACTCTTTGCAGCGAAGGTCCTaGCTTAACTTACCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: NSKTLRSRQTFFFPKTNSLQRRS*LNLPRW
Trigger: CCAGCGGGGTAAGTTAAGCCAGGACCTTCGCTGCAA...AGAGTTAGTTTTAGGGAAAAAGAATGTCTGCCTAGACCTCAAAGTCTTTGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp CACCATGTTAATACATTTACTTACTACCATACACCTGAACAGTCACGGCAGAACATGGAAGCTGGAGACTaGAGGAGCAATAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: HHVNTFTYYHTPEQSRQNMEAGD*RSNKTR
Trigger: CCTGGTTTTATTGCTCCTTCAGTCTCCAGCTTCCAT...GTTCTGCCGTGACTGTTCAGGTGTATGGTAGTAAGTAAATGTATTAACATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp AGAAAAATAGATTTGGATTACATCTTTGTGGACGGCTACGATACAGTTTGGAAACCTTTCTGGATTCATTaGTGGCACGCCGAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: RKIDLDYIFVDGYDTVWKPFWIH*WHAEES
Trigger: GCTCTCCTCGGCGTGCCACCAATGAATCCAGAAAGG...TTTCCAAACTGTATCGTAGCCGTCCACAAAGATGTAATCCAAATCTATTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313683.15
3UTR CAA 72 bp AACTTGTTAACACAACGAAGCCCTAATGGACCCGTTTaGAAATTAGAAGCTGGACAGTTACAGGCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: NLLTQRSPNGPV*KLEAGQLQALV
Trigger: GACCAAAGCCTGTAACTGTCCAGCTTCTAATTTCAAAACGGGTCCATTAGGGCTTCGTTGTGTTAACAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp AGAAAAATAGATTTGGATTACATCTTTGTGGACGGCTACGATACAGTTTGGAAAAGAACCCACCTCTGCTaGAAGCCCCGGTTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: RKIDLDYIFVDGYDTVWKRTHLC*KPRFFL
Trigger: AAGAAAGAACCGGGGCTTGCAGCAGAGGTGGGTTCT...TTTCCAAACTGTATCGTAGCCGTCCACAAAGATGTAATCCAAATCTATTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp AGAAAAATAGATTTGGATTACATCTTTGTGGACGGCTACGATACAGTTTGGAAAGGCCTTCTTCTTTGGTaGGCTTTCATGGCCACCATC +
Preference number: 4 (lower is better)
Translates to: RKIDLDYIFVDGYDTVWKGLLLW*AFMATI
Trigger: GATGGTGGCCATGAAAGCCCACCAAAGAAGAAGGCC...TTTCCAAACTGTATCGTAGCCGTCCACAAAGATGTAATCCAAATCTATTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp AGAAAAATAGATTTGGATTACATCTTTGTGGACGGCTACGATACAGTTTGGAAAATGCAGAAGATGATCTaGACCACTGCTCCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: RKIDLDYIFVDGYDTVWKMQKMI*TTAPRS
Trigger: GCTTCTGGGAGCAGTGGTGCAGATCATCTTCTGCAT...TTTCCAAACTGTATCGTAGCCGTCCACAAAGATGTAATCCAAATCTATTTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp AACTCAAAGACTTTGAGGTCTAGGCAGACATTCTTTTTCCCTAAAACTAACTCTCTGGAGTTCTTCTTCTaGTTCTTTCTCCTGGAGCGA +
Preference number: 4 (lower is better)
Translates to: NSKTLRSRQTFFFPKTNSLEFFF*FFLLER
Trigger: TCGCTCCAGGAGAAAGAAGCAGAAGAAGAACTCCAG...AGAGTTAGTTTTAGGGAAAAAGAATGTCTGCCTAGACCTCAAAGTCTTTGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp AGAAAAATAGATTTGGATTACATCTTTGTGGACGGCTACGATACAGTTTGGAAATCCTGGCTAGATAACTaGAGGATGGAAGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: RKIDLDYIFVDGYDTVWKSWLDN*RMEAGD
Trigger: GTCTCCAGCTTCCATCCTCCAGTTATCTAGCCAGGA...TTTCCAAACTGTATCGTAGCCGTCCACAAAGATGTAATCCAAATCTATTTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp CCCGTTTTGAAATTAGAAGCTGGACAGTTACAGGCTTTGGTCTCTTCAAGAATCGACTTCCAACATATCTaGGTAGTCACTTTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: PVLKLEAGQLQALVSSRIDFQHI*VVTFQF
Trigger: AAACTGAAAAGTGACTACTCAGATATGTTGGAAGTC...GATTCTTGAAGAGACCAAAGCCTGTAACTGTCCAGCTTCTAATTTCAAAACGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp TACACGTTTACATTTACTAGTCATGGTGTCAACTTGTTAACACAACGAAGCCCTCAGAACAAGAGCATGTaGATGACGAAAGGAAACTTG +
Preference number: 4 (lower is better)
Translates to: YTFTFTSHGVNLLTQRSPQNKSM*MTKGNL
Trigger: CAAGTTTCCTTTCGTCATTCACATGCTCTTGTTCTG...AGGGCTTCGTTGTGTTAACAAGTTGACACCATGACTAGTAAATGTAAACGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CCA 90 bp CACCATGTTAATACATTTACTTACTACCATACACCTGAACAGTCACGGCAGAACGACAGTTACAGGCTTTaGTCTCTTCAAGAATCCAAT +
Preference number: 4 (lower is better)
Translates to: HHVNTFTYYHTPEQSRQNDSYRL*SLQESN
Trigger: ATTGGATTCTTGAAGAGACCAAAGCCTGTAACTGTC...GTTCTGCCGTGACTGTTCAGGTGTATGGTAGTAAGTAAATGTATTAACATGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
3UTR CAA 72 bp GAGAGTCCAAAGTCTTATTCAGTGACAAGAGAGAACTaGGTTGACTTGGTACTTCTTCCTTGTTCTTTCAAC +
Preference number: 4 (lower is better)
Translates to: ESPKSYSVTREN*VDLVLLPCSFN
Trigger: GTTGAAAGAACAAGGAAGAAGTACCAAGTCAACCAAGTTCTCTCTTGTCACTGAATAAGACTTTGGACTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp CGCCCTGAAAACTTGCAAGGGCTAATACTCTATGATAGAATATTACTACTGTTCAAAACTCAAAGACTTTaGGGTCTAGGCAGACATTCT +
Preference number: 4 (lower is better)
Translates to: RPENLQGLILYDRILLLFKTQRL*GLGRHS
Trigger: AGAATGTCTGCCTAGACCTCAAAGTCTTTGAGTTTT...GAACAGTAGTAATATTCTATCATAGAGTATTAGCCCTTGCAAGTTTTCAGGGCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR TCA 90 bp TACACGTTTACATTTACTAGTCATGGTGTCAACTTGTTAACACAACGAAGCCCTACTCACTCAGGATTTTaGAATGAATCATCACGAGAA +
Preference number: 4 (lower is better)
Translates to: YTFTFTSHGVNLLTQRSPTHSGF*NESSRE
Trigger: TTCTCGTGATGATTCATTTCAAAATCCTGAGTGAGT...AGGGCTTCGTTGTGTTAACAAGTTGACACCATGACTAGTAAATGTAAACGTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR GCA 90 bp ACATGCACAGGAATTTCTTCCACTTCTAACCTCGCTCATCAGTCACATTTACAATCAGATTATAGAACATaGACAGGAATTTCTTCCACT +
Preference number: 4 (lower is better)
Translates to: TCTGISSTSNLAHQSHLQSDYRT*TGISST
Trigger: AGTGGAAGAAATTCCTGTGCATGTTCTATAATCTGA...TTGTAAATGTGACTGATGAGCGAGGTTAGAAGTGGAAGAAATTCCTGTGCATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS GCA 90 bp GATCAGCCTCCGACCGCCCAGCCAGGCCAAGGAGACGCAGTGGAATaGAGCCGTTTCCCAGTCGCTGGCTCCGGCTACCCCGGCGCCGCT +
Preference number: 5 (lower is better)
Translates to: DQPPTAQPGQGDAVE*SRFPVAGSGYPGAA
Trigger: AGCGGCGCCGGGGTAGCCGGAGCCAGCGACTGGGAAACGGCTGCATTCCACTGCGTCTCCTTGGCCTGGCTGGGCGGTCGGAGGCTGATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000602246.1
CDS CCA 90 bp TGGCAGATCAGCCTCCGACCGCCCAGCCAGGCCAAGGAGACGCAGTaGAATGCAGCCGTTTCCCAGTCGCTGGCTCCGGCTACCCCGGCG +
Preference number: 5 (lower is better)
Translates to: WQISLRPPSQAKETQ*NAAVSQSLAPATPA
Trigger: CGCCGGGGTAGCCGGAGCCAGCGACTGGGAAACGGCTGCATTCCACTGCGTCTCCTTGGCCTGGCTGGGCGGTCGGAGGCTGATCTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000602246.1
CDS TCA 90 bp GACTCAGAGGCGCCTCCTGGGCTCTCGGCTTCTGCCCGGGCATCCTaGGGTGGCTCTCTGGGACCCTTCCAGGCACATTTCGCCATGGGC +
Preference number: 5 (lower is better)
Translates to: DSEAPPGLSASARAS*GGSLGPFQAHFAMG
Trigger: GCCCATGGCGAAATGTGCCTGGAAGGGTCCCAGAGAGCCACCTCAGGATGCCCGGGCAGAAGCCGAGAGCCCAGGAGGCGCCTCTGAGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS CCA 90 bp GCTGCTAAAGCCCAGGCTGCCATCTCCTCGAATTCAGCGGCCTCCTaGGCCCTGGCTTCCTCCCGGCTGCGGATCTCGGCATCCATGCAG +
Preference number: 5 (lower is better)
Translates to: AAKAQAAISSNSAAS*ALASSRLRISASMQ
Trigger: CTGCATGGATGCCGAGATCCGCAGCCGGGAGGAAGCCAGGGCCCAGGAGGCCGCTGAATTCGAGGAGATGGCAGCCTGGGCTTTAGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp TATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCAGAGGTCGCTGACGACAGGGTGGGGTGGTaGAGCTGGAGCAGGCGGACC +
Preference number: 5 (lower is better)
Translates to: YGRATQLFQMPGPAEVADDRVGW*SWSRRT
Trigger: GGTCCGCCTGCTCCAGCTCAACCACCCCACCCTGTC...GTCAGCGACCTCTGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp CCAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGCACGACAGGGTGGGGTGGTaGAGCTGGAGCAGGCGGACC +
Preference number: 5 (lower is better)
Translates to: PIHPWVSLGTHPRRTSMHDRVGW*SWSRRT
Trigger: GGTCCGCCTGCTCCAGCTCAACCACCCCACCCTGTC...GTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp ATGCCAGGGCCTGCAGAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGAGCCTGGCCCTTTCTTaGGCATCACCGGCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: MPGPAEVADHSEEGARRGSLALS*ASPASS
Trigger: GGAAGAAGCCGGTGATGCCAAAGAAAGGGCCAGGCT...CCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTCTGCAGGCCCTGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS TCA 90 bp GTTGAGGCTGTTGCCTCGGCAGGCTGCTGGCCCCGAGGGGCCTTCTaGTCTGATGCCTCCCTTCTTGAGCCTGGCCCTTTCTTTGGCATC +
Preference number: 5 (lower is better)
Translates to: VEAVASAGCWPRGAF*SDASLLEPGPFFGI
Trigger: GATGCCAAAGAAAGGGCCAGGCTCAAGAAGGGAGGCATCAGATCAGAAGGCCCCTCGGGGCCAGCAGCCTGCCGAGGCAACAGCCTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS CCA 90 bp CTCCTGGGCTCTCGGCTTCTGCCCGGGCATCCTGAGGTGGCTCTCTaGGACCCTTCCAGGCACATTTCGCCATGGGCTTCTTCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: LLGSRLLPGHPEVAL*DPSRHISPWASSKP
Trigger: TGGCTTTGAAGAAGCCCATGGCGAAATGTGCCTGGAAGGGTCCCAGAGAGCCACCTCAGGATGCCCGGGCAGAAGCCGAGAGCCCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp TATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCAGAGGTCGCTGACGGCTTTCTGCTGCCCTaGATCGGCTCTGAGATCGCC +
Preference number: 5 (lower is better)
Translates to: YGRATQLFQMPGPAEVADGFLLP*IGSEIA
Trigger: GGCGATCTCAGAGCCGATCAAGGGCAGCAGAAAGCC...GTCAGCGACCTCTGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp CAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGCACAATGGGAGCGGGGTTCTaGGCAGACACCCAGGCCACG +
Preference number: 5 (lower is better)
Translates to: QFTPGFRLAHTPGERRCTMGAGF*ADTQAT
Trigger: CGTGGCCTGGGTGTCTGCCAAGAACCCCGCTCCCAT...TGTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp ATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCAGAGGTCGCTGACCCTGCGAACCAAAGGTTaGGTAGGCTCATGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: MAGPPSSSKCQGLQRSLTLRTKG*VGSCWS
Trigger: AGACCAGCATGAGCCTACCAAACCTTTGGTTCGCAG...GGTCAGCGACCTCTGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS CCA 90 bp TCCTCAGTATGGGTGGTCCCCCAGATCAAACCTTTCTGGATTCATTaGTGGCACGCCGAGGAGAGCCTTCTGGCTTGGCCTTCGGACCCC +
Preference number: 5 (lower is better)
Translates to: SSVWVVPQIKPFWIH*WHAEESLLAWPSDP
Trigger: GGGGTCCGAAGGCCAAGCCAGAAGGCTCTCCTCGGCGTGCCACCAATGAATCCAGAAAGGTTTGATCTGGGGGACCACCCATACTGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS-3UTR CAA 90 bp GAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGGGAGAAAAGCTGAACCTGCGAACCAAAGGTTaGGTAGGCTCATGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: EVADHSEEGARRGGEKLNLRTKG*VGSCWS
Trigger: AGACCAGCATGAGCCTACCAAACCTTTGGTTCGCAG...GTTCAGCTTTTCTCCCCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp TTACACGAGAGGAAGGCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCACCACGGCCTTCTTCTTaGGTGGGCTTTCATGGCCAC +
Preference number: 5 (lower is better)
Translates to: LHERKAGGRIWQGHPALPPRPSS*VGFHGH
Trigger: GTGGCCATGAAAGCCCACCAAAGAAGAAGGCCGTGG...TGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGCCTTCCTCTCGTGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS GCA 90 bp CCCTTCTTGAGCCTGGCCCTTTCTTTGGCATCACCGGCTTCTTCCTaGCATCTTCTGAGTCAACCAAGACGTAGGAGACAGGGCCCAAGC +
Preference number: 5 (lower is better)
Translates to: PFLSLALSLASPASS*HLLSQPRRRRQGPS
Trigger: GCTTGGGCCCTGTCTCCTACGTCTTGGTTGACTCAGAAGATGGCAGGAAGAAGCCGGTGATGCCAAAGAAAGGGCCAGGCTCAAGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS-3UTR CAA 90 bp TATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCAGAGGTCGCTGACCGGCTACGATACAGTTaGGAAACCATTATCTCAGGG +
Preference number: 5 (lower is better)
Translates to: YGRATQLFQMPGPAEVADRLRYS*ETIISG
Trigger: CCCTGAGATAATGGTTTCCAAACTGTATCGTAGCCG...GTCAGCGACCTCTGCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS TCA 90 bp GCCTGGCCCTTTCTTTGGCATCACCGGCTTCTTCCTGCCATCTTCTaGGTCAACCAAGACGTAGGAGACAGGGCCCAAGCTCACCTTCTT +
Preference number: 5 (lower is better)
Translates to: AWPFLWHHRLLPAIF*VNQDVGDRAQAHLL
Trigger: AAGAAGGTGAGCTTGGGCCCTGTCTCCTACGTCTTGGTTGACTCAGAAGATGGCAGGAAGAAGCCGGTGATGCCAAAGAAAGGGCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS-3UTR CAA 90 bp ACCTCACCTATCGTTTACCTCAGGGCCAGATCTCTATCAACAGGGGCCCTAAGAGGCTTTCTGCTGCCCTaGATCGGCTCTGAGATCGCC +
Preference number: 5 (lower is better)
Translates to: TSPIVYLRARSLSTGALRGFLLP*IGSEIA
Trigger: GGCGATCTCAGAGCCGATCAAGGGCAGCAGAAAGCC...TCTTAGGGCCCCTGTTGATAGAGATCTGGCCCTGAGGTAAACGATAGGTGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp GAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGGGAGAAAAGCTGAACTGGGGTTTCACCATGTaGGTCAAGCTGGTCTTAAAC +
Preference number: 5 (lower is better)
Translates to: EVADHSEEGARRGGEKLNWGFTM*VKLVLN
Trigger: GTTTAAGACCAGCTTGACCAACATGGTGAAACCCCA...GTTCAGCTTTTCTCCCCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS CCA 90 bp CATCCTGAGGTGGCTCTCTGGGACCCTTCCAGGCACATTTCGCCATaGGCTTCTTCAAAGCCAACTCCTCCTTATTCACACAGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: HPEVALWDPSRHISP*ASSKPTPPYSHRAF
Trigger: GAAAGCCCTGTGTGAATAAGGAGGAGTTGGCTTTGAAGAAGCCCATGGCGAAATGTGCCTGGAAGGGTCCCAGAGAGCCACCTCAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS CCA 90 bp TCTTTCAACTCCTCAGTATGGGTGGTCCCCCAGATCAAACCTTTCTaGATTCATTGGTGGCACGCCGAGGAGAGCCTTCTGGCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: SFNSSVWVVPQIKPF*IHWWHAEESLLAWP
Trigger: AGGCCAAGCCAGAAGGCTCTCCTCGGCGTGCCACCAATGAATCCAGAAAGGTTTGATCTGGGGGACCACCCATACTGAGGAGTTGAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS-3UTR CAA 90 bp CACCATGTTAATACATTTACTTACTACCATACACCTGAACAGTCACGGCAGAACGGCGAGAAGCCGAGGTaGGCGTCGCAGCGCGCGCCT +
Preference number: 5 (lower is better)
Translates to: HHVNTFTYYHTPEQSRQNGEKPR*ASQRAP
Trigger: AGGCGCGCGCTGCGACGCCAACCTCGGCTTCTCGCC...GTTCTGCCGTGACTGTTCAGGTGTATGGTAGTAAGTAAATGTATTAACATGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS-3UTR CAA 90 bp GCGCACGCAAACACACACACACACACACACAATGACACATGGTGGTCTGGTCTACCACGGCCTTCTTCTTaGGTGGGCTTTCATGGCCAC +
Preference number: 5 (lower is better)
Translates to: AHANTHTHTHNDTWWSGLPRPSS*VGFHGH
Trigger: GTGGCCATGAAAGCCCACCAAAGAAGAAGGCCGTGG...TAGACCAGACCACCATGTGTCATTGTGTGTGTGTGTGTGTGTGTTTGCGTGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp GCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCCAAATGCCAGGGCCTGCCTTGGTACTTCTTCCTaGTTCTTTCAACTCCTCAGT +
Preference number: 5 (lower is better)
Translates to: AGGRIWQGHPALPNARACLGTSS*FFQLLS
Trigger: ACTGAGGAGTTGAAAGAACAAGGAAGAAGTACCAAG...GCAGGCCCTGGCATTTGGAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS TCA 90 bp TCAAAGCCAACTCCTCCTTATTCACACAGGGCTTTCTGCTGCCCTTaGTCGGCTCTGAGATCGCCATGCTTTCAGCATCACCCACCTCAG +
Preference number: 5 (lower is better)
Translates to: SKPTPPYSHRAFCCP*SALRSPCFQHHPPQ
Trigger: CTGAGGTGGGTGATGCTGAAAGCATGGCGATCTCAGAGCCGATCAAGGGCAGCAGAAAGCCCTGTGTGAATAAGGAGGAGTTGGCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp CCAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGCACAAGTTAGCTGTGCTGTaGGAATTGATGCCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: PIHPWVSLGTHPRRTSMHKLAVL*ELMPLG
Trigger: ACCCAAAGGCATCAATTCCAACAGCACAGCTAACTT...GTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp GGTTACACGAGAGGAAGGCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCAAGTTAGCTGTGCTGTaGGAATTGATGCCTTTGGGT +
Preference number: 5 (lower is better)
Translates to: GYTRGRREEEYGRATQLFKLAVL*ELMPLG
Trigger: ACCCAAAGGCATCAATTCCAACAGCACAGCTAACTT...GAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGCCTTCCTCTCGTGTAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp GAGGTCGCTGACCATTCCGAGGAGGGAGCAAGGCGTGGGGGAGAAAAGCTGAACCTTGGTACTTCTTCCTaGTTCTTTCAACTCCTCAGT +
Preference number: 5 (lower is better)
Translates to: EVADHSEEGARRGGEKLNLGTSS*FFQLLS
Trigger: ACTGAGGAGTTGAAAGAACAAGGAAGAAGTACCAAG...GTTCAGCTTTTCTCCCCCACGCCTTGCTCCCTCCTCGGAATGGTCAGCGACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp TACCCCGCTGGTTACACGAGAGGAAGGCGGGAGGAAGAATATGGCAGGGCCACCGTGACAAGAGAGAACTaGGTTGACTTGGTACTTCTT +
Preference number: 5 (lower is better)
Translates to: YPAGYTRGRREEEYGRATVTREN*VDLVLL
Trigger: AAGAAGTACCAAGTCAACCAAGTTCTCTCTTGTCAC...GGTGGCCCTGCCATATTCTTCCTCCCGCCTTCCTCTCGTGTAACCAGCGGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp CAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGCACATGGGGTTTCACCATGTaGGTCAAGCTGGTCTTAAAC +
Preference number: 5 (lower is better)
Translates to: QFTPGFRLAHTPGERRCTWGFTM*VKLVLN
Trigger: GTTTAAGACCAGCTTGACCAACATGGTGAAACCCCA...TGTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp GGTTACACGAGAGGAAGGCGGGAGGAAGAATATGGCAGGGCCACCCAGCTCTTCGAGAACTTGGTTGACTaGGTACTTCTTCCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: GYTRGRREEEYGRATQLFENLVD*VLLPCS
Trigger: AGAACAAGGAAGAAGTACCAAGTCAACCAAGTTCTC...GAAGAGCTGGGTGGCCCTGCCATATTCTTCCTCCCGCCTTCCTCTCGTGTAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp CCAATTCACCCCTGGGTTTCGCTTGGCACACACCCCAGGAGAACGTCGATGCACCAAGAGAGAACTTGGTaGACTTGGTACTTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: PIHPWVSLGTHPRRTSMHQERTW*TWYFFL
Trigger: AAGGAAGAAGTACCAAGTCAACCAAGTTCTCTCTTG...GTGCATCGACGTTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGTGAATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp AACTCCCTCCCACCCAAGACCTCACCTATCGTTTACCTCAGGGCCAGATCTCTAGCAATAAAACCAGGTTaGCAGCGAAGGTCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: NSLPPKTSPIVYLRARSLAIKPG*QRRSWL
Trigger: AAGCCAGGACCTTCGCTGCAAACCTGGTTTTATTGC...TAGAGATCTGGCCCTGAGGTAAACGATAGGTGAGGTCTTGGGTGGGAGGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp TACACGTTTACATTTACTAGTCATGGTGTCAACTTGTTAACACAACGAAGCCCTATGGGAGCGGGGTTCTaGGCAGACACCCAGGCCACG +
Preference number: 5 (lower is better)
Translates to: YTFTFTSHGVNLLTQRSPMGAGF*ADTQAT
Trigger: CGTGGCCTGGGTGTCTGCCAAGAACCCCGCTCCCAT...AGGGCTTCGTTGTGTTAACAAGTTGACACCATGACTAGTAAATGTAAACGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp AACTCCCTCCCACCCAAGACCTCACCTATCGTTTACCTCAGGGCCAGATCTCTACCTAATGGACCCGTTTaGAAATTAGAAGCTGGACAG +
Preference number: 5 (lower is better)
Translates to: NSLPPKTSPIVYLRARSLPNGPV*KLEAGQ
Trigger: CTGTCCAGCTTCTAATTTCAAAACGGGTCCATTAGG...TAGAGATCTGGCCCTGAGGTAAACGATAGGTGAGGTCTTGGGTGGGAGGGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS CCA 90 bp TTGACTTGGTACTTCTTCCTTGTTCTTTCAACTCCTCAGTATGGGTaGTCCCCCAGATCAAACCTTTCTGGATTCATTGGTGGCACGCCG +
Preference number: 5 (lower is better)
Translates to: LTWYFFLVLSTPQYG*SPRSNLSGFIGGTP
Trigger: CGGCGTGCCACCAATGAATCCAGAAAGGTTTGATCTGGGGGACCACCCATACTGAGGAGTTGAAAGAACAAGGAAGAAGTACCAAGTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS-3UTR CAA 90 bp TACACGTTTACATTTACTAGTCATGGTGTCAACTTGTTAACACAACGAAGCCCTGGAGAGCCTTCTGGCTaGGCCTTCGGACCCCTAGAG +
Preference number: 5 (lower is better)
Translates to: YTFTFTSHGVNLLTQRSPGEPSG*AFGPLE
Trigger: CTCTAGGGGTCCGAAGGCCAAGCCAGAAGGCTCTCC...AGGGCTTCGTTGTGTTAACAAGTTGACACCATGACTAGTAAATGTAAACGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS-3UTR CAA 90 bp CGATACAGTTTGGAAACCATTATCTCAGGGACCCTGCTCTCTCCTCTACACATGGCAATAAAACCAGGTTaGCAGCGAAGGTCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: RYSLETIISGTLLSPLHMAIKPG*QRRSWL
Trigger: AAGCCAGGACCTTCGCTGCAAACCTGGTTTTATTGC...CATGTGTAGAGGAGAGAGCAGGGTCCCTGAGATAATGGTTTCCAAACTGTATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp CCCTCCCACCCAAGACCTCACCTATCGTTTACCTCAGGGCCAGATCTCTATCAAATGACGAAAGGAAACTaGCTTTCAGGGTGTCAGATT +
Preference number: 5 (lower is better)
Translates to: PSHPRPHLSFTSGPDLYQMTKGN*LSGCQI
Trigger: AATCTGACACCCTGAAAGCAAGTTTCCTTTCGTCAT...TTGATAGAGATCTGGCCCTGAGGTAAACGATAGGTGAGGTCTTGGGTGGGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp CCCTGCTCATGCATAAAGGGGAATGAATGTTCTAGAATTTTCCCAATCCTCTTAACCCCTGGGTTTCGCTaGGCACACACCCCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: PCSCIKGNECSRIFPILLTPGFR*AHTPGE
Trigger: TTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGT...TAAGAGGATTGGGAAAATTCTAGAACATTCATTCCCCTTTATGCATGAGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp GCGCACGCAAACACACACACACACACACACAATGACACATGGTGGTCTGGTCTACCTAATGGACCCGTTTaGAAATTAGAAGCTGGACAG +
Preference number: 5 (lower is better)
Translates to: AHANTHTHTHNDTWWSGLPNGPV*KLEAGQ
Trigger: CTGTCCAGCTTCTAATTTCAAAACGGGTCCATTAGG...TAGACCAGACCACCATGTGTCATTGTGTGTGTGTGTGTGTGTGTTTGCGTGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp AATGGACCCGTTTTGAAATTAGAAGCTGGACAGTTACAGGCTTTGGTCTCTTCAACCTTTCTGGATTCATaGGTGGCACGCCGAGGAGAG +
Preference number: 5 (lower is better)
Translates to: NGPVLKLEAGQLQALVSSTFLDS*VARRGE
Trigger: CTCTCCTCGGCGTGCCACCAATGAATCCAGAAAGGT...TGAAGAGACCAAAGCCTGTAACTGTCCAGCTTCTAATTTCAAAACGGGTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS-3UTR CAA 90 bp AAGTCTTATTCAGTGACAAGAGAGAACTTGGTTGACTTGGTACTTCTTCCTTGTACCCCTGGGTTTCGCTaGGCACACACCCCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: KSYSVTRENLVDLVLLPCTPGFR*AHTPGE
Trigger: TTCTCCTGGGGTGTGTGCCAAGCGAAACCCAGGGGT...ACAAGGAAGAAGTACCAAGTCAACCAAGTTCTCTCTTGTCACTGAATAAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS CCA 90 bp TTGGTTGACTTGGTACTTCTTCCTTGTTCTTTCAACTCCTCAGTATaGGTGGTCCCCCAGATCAAACCTTTCTGGATTCATTGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: LVDLVLLPCSFNSSV*VVPQIKPFWIHWWH
Trigger: GTGCCACCAATGAATCCAGAAAGGTTTGATCTGGGGGACCACCCATACTGAGGAGTTGAAAGAACAAGGAAGAAGTACCAAGTCAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS-3UTR CAA 90 bp AATGGACCCGTTTTGAAATTAGAAGCTGGACAGTTACAGGCTTTGGTCTCTTCACTCCAAACAGTAATCTaGGCAGATCAGCCTCCGACC +
Preference number: 5 (lower is better)
Translates to: NGPVLKLEAGQLQALVSSLQTVI*ADQPPT
Trigger: GGTCGGAGGCTGATCTGCCAAGATTACTGTTTGGAG...TGAAGAGACCAAAGCCTGTAACTGTCCAGCTTCTAATTTCAAAACGGGTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp CCCTGCTCATGCATAAAGGGGAATGAATGTTCTAGAATTTTCCCAATCCTCTTACTCCAAACAGTAATCTaGGCAGATCAGCCTCCGACC +
Preference number: 5 (lower is better)
Translates to: PCSCIKGNECSRIFPILLLQTVI*ADQPPT
Trigger: GGTCGGAGGCTGATCTGCCAAGATTACTGTTTGGAG...TAAGAGGATTGGGAAAATTCTAGAACATTCATTCCCCTTTATGCATGAGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp ACGATACAGTTTGGAAACCATTATCTCAGGGACCCTGCTCTCTCCTCTACACATAGTCATGGTGTCAACTaGTTAACACAACGAAGCCCT +
Preference number: 5 (lower is better)
Translates to: TIQFGNHYLRDPALSSTHSHGVN*LTQRSP
Trigger: AGGGCTTCGTTGTGTTAACAAGTTGACACCATGACT...ATGTGTAGAGGAGAGAGCAGGGTCCCTGAGATAATGGTTTCCAAACTGTATCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp ACAGGGGCCCTAAGAGAGTCCAAAGTCTTATTCAGTGACAAGAGAGAACTTGGTAGTCATGGTGTCAACTaGTTAACACAACGAAGCCCT +
Preference number: 5 (lower is better)
Translates to: TGALRESKVLFSDKRELGSHGVN*LTQRSP
Trigger: AGGGCTTCGTTGTGTTAACAAGTTGACACCATGACT...ACCAAGTTCTCTCTTGTCACTGAATAAGACTTTGGACTCTCTTAGGGCCCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp ACGATACAGTTTGGAAACCATTATCTCAGGGACCCTGCTCTCTCCTCTACACATCAAGAGAGAACTTGGTaGACTTGGTACTTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: TIQFGNHYLRDPALSSTHQERTW*TWYFFL
Trigger: AAGGAAGAAGTACCAAGTCAACCAAGTTCTCTCTTG...ATGTGTAGAGGAGAGAGCAGGGTCCCTGAGATAATGGTTTCCAAACTGTATCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp ACGATACAGTTTGGAAACCATTATCTCAGGGACCCTGCTCTCTCCTCTACACATGTGACAAGAGAGAACTaGGTTGACTTGGTACTTCTT +
Preference number: 5 (lower is better)
Translates to: TIQFGNHYLRDPALSSTHVTREN*VDLVLL
Trigger: AAGAAGTACCAAGTCAACCAAGTTCTCTCTTGTCAC...ATGTGTAGAGGAGAGAGCAGGGTCCCTGAGATAATGGTTTCCAAACTGTATCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS CCA 90 bp TTGGTTGACTTGGTACTTCTTCCTTGTTCTTTCAACTCCTCAGTATaGGTGGTCCCCCAGATCAAACCTTTCTGGATTCTTCTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: LVDLVLLPCSFNSSV*VVPQIKPFWILLLL
Trigger: AAGAAGAAGAAGAATCCAGAAAGGTTTGATCTGGGGGACCACCCATACTGAGGAGTTGAAAGAACAAGGAAGAAGTACCAAGTCAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438932.2
CDS-3UTR CAA 90 bp ACATGCACAGGAATTTCTTCCACTTCTAACCTCGCTCATCAGTCACATTTACAACGGCTACGATACAGTTaGGAAACCATTATCTCAGGG +
Preference number: 5 (lower is better)
Translates to: TCTGISSTSNLAHQSHLQRLRYS*ETIISG
Trigger: CCCTGAGATAATGGTTTCCAAACTGTATCGTAGCCG...TTGTAAATGTGACTGATGAGCGAGGTTAGAAGTGGAAGAAATTCCTGTGCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp CCCGTTTTGAAATTAGAAGCTGGACAGTTACAGGCTTTGGTCTCTTCAAGAATCGAGAACTTGGTTGACTaGGTACTTCTTCCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: PVLKLEAGQLQALVSSRIENLVD*VLLPCS
Trigger: AGAACAAGGAAGAAGTACCAAGTCAACCAAGTTCTC...GATTCTTGAAGAGACCAAAGCCTGTAACTGTCCAGCTTCTAATTTCAAAACGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp ACATGCACAGGAATTTCTTCCACTTCTAACCTCGCTCATCAGTCACATTTACAAGGACAGTTACAGGCTTaGGTCTCTTCAAGAATCCAA +
Preference number: 5 (lower is better)
Translates to: TCTGISSTSNLAHQSHLQGQLQA*VSSRIQ
Trigger: TTGGATTCTTGAAGAGACCAAAGCCTGTAACTGTCC...TTGTAAATGTGACTGATGAGCGAGGTTAGAAGTGGAAGAAATTCCTGTGCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp AAGTCTTATTCAGTGACAAGAGAGAACTTGGTTGACTTGGTACTTCTTCCTTGTGGACAGTTACAGGCTTaGGTCTCTTCAAGAATCCAA +
Preference number: 5 (lower is better)
Translates to: KSYSVTRENLVDLVLLPCGQLQA*VSSRIQ
Trigger: TTGGATTCTTGAAGAGACCAAAGCCTGTAACTGTCC...ACAAGGAAGAAGTACCAAGTCAACCAAGTTCTCTCTTGTCACTGAATAAGACTT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS-3UTR CAA 90 bp AACTCAAAGACTTTGAGGTCTAGGCAGACATTCTTTTTCCCTAAAACTAACTCTATGACGAAAGGAAACTaGCTTTCAGGGTGTCAGATT +
Preference number: 5 (lower is better)
Translates to: NSKTLRSRQTFFFPKTNSMTKGN*LSGCQI
Trigger: AATCTGACACCCTGAAAGCAAGTTTCCTTTCGTCAT...AGAGTTAGTTTTAGGGAAAAAGAATGTCTGCCTAGACCTCAAAGTCTTTGAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS CCA 72 bp GCCCAGGCTGCCATCTCCTCGAATTCAGCGGCCTCCTaGGCCCTGGCTTCCTCCCGGCTGCGGATCTCGGCA +
Preference number: 6 (lower is better)
Translates to: AQAAISSNSAAS*ALASSRLRISA
Trigger: TGCCGAGATCCGCAGCCGGGAGGAAGCCAGGGCCCAGGAGGCCGCTGAATTCGAGGAGATGGCAGCCTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS TCA 72 bp AGAGCCTTCTGGCTTGGCCTTCGGACCCCTAGAGGTTaGGGCTGTTGCCTCGGCAGGCTGCTGGCCCCGAGG +
Preference number: 6 (lower is better)
Translates to: RAFWLGLRTPRG*GCCLGRLLAPR
Trigger: CCTCGGGGCCAGCAGCCTGCCGAGGCAACAGCCTCAACCTCTAGGGGTCCGAAGGCCAAGCCAGAAGGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS CCA 72 bp CTGCCATCTCCTCGAATTCAGCGGCCTCCTGGGCCCTaGCTTCCTCCCGGCTGCGGATCTCGGCATCCATGC +
Preference number: 6 (lower is better)
Translates to: LPSPRIQRPPGP*LPPGCGSRHPC
Trigger: GCATGGATGCCGAGATCCGCAGCCGGGAGGAAGCCAGGGCCCAGGAGGCCGCTGAATTCGAGGAGATGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS TCA 72 bp GTTGCCTCGGCAGGCTGCTGGCCCCGAGGGGCCTTCTaGTCTGATGCCTCCCTTCTTGAGCCTGGCCCTTTC +
Preference number: 6 (lower is better)
Translates to: VASAGCWPRGAF*SDASLLEPGPF
Trigger: GAAAGGGCCAGGCTCAAGAAGGGAGGCATCAGATCAGAAGGCCCCTCGGGGCCAGCAGCCTGCCGAGGCAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS TCA 72 bp CCTCCCGGCTGCGGATCTCGGCATCCATGCAGAAGATaGTCTGCACCACTGCTCCCAGAAGCACCCCCAGAG +
Preference number: 6 (lower is better)
Translates to: PPGCGSRHPCRR*SAPLLPEAPPE
Trigger: CTCTGGGGGTGCTTCTGGGAGCAGTGGTGCAGATCATCTTCTGCATGGATGCCGAGATCCGCAGCCGGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS CCA 72 bp TCTCGGCTTCTGCCCGGGCATCCTGAGGTGGCTCTCTaGGACCCTTCCAGGCACATTTCGCCATGGGCTTCT +
Preference number: 6 (lower is better)
Translates to: SRLLPGHPEVAL*DPSRHISPWAS
Trigger: AGAAGCCCATGGCGAAATGTGCCTGGAAGGGTCCCAGAGAGCCACCTCAGGATGCCCGGGCAGAAGCCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS CAA 72 bp GTGGACGTGGGCTGCAGCGGTCTCCAAACAGTAATCTaGGCAGATCAGCCTCCGACCGCCCAGCCAGGCCAA +
Preference number: 6 (lower is better)
Translates to: VDVGCSGLQTVI*ADQPPTAQPGQ
Trigger: TTGGCCTGGCTGGGCGGTCGGAGGCTGATCTGCCAAGATTACTGTTTGGAGACCGCTGCAGCCCACGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313683.15
ENST00000438932.2
ENST00000602246.1
CDS CAA 90 bp GTCTATCAGGTGGACGTGGGCTGCAGCGGTCTCCAAACAGTAATCTaGGCAGATCAGCCTCCGACCGCCCAGCCAGGCCAAGGAGACGCA +
Preference number: 6 (lower is better)
Translates to: VYQVDVGCSGLQTVI*ADQPPTAQPGQGDA
Trigger: TGCGTCTCCTTGGCCTGGCTGGGCGGTCGGAGGCTGATCTGCCAAGATTACTGTTTGGAGACCGCTGCAGCCCACGTCCACCTGATAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313683.15
ENST00000438932.2
ENST00000602246.1
CDS CAA 90 bp TGGGAGCGGGGTTCTTGGCAGACACCCAGGCCACGGCCTTCTTCTTaGGTGGGCTTTCATGGCCACCATCTTGGTCTGACTCAGAGGCGC +
Preference number: 6 (lower is better)
Translates to: WERGSWQTPRPRPSS*VGFHGHHLGLTQRR
Trigger: GCGCCTCTGAGTCAGACCAAGATGGTGGCCATGAAAGCCCACCAAAGAAGAAGGCCGTGGCCTGGGTGTCTGCCAAGAACCCCGCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS CAA 90 bp ACCTTTCTGGATTCATTGGTGGCACGCCGAGGAGAGCCTTCTGGCTaGGCCTTCGGACCCCTAGAGGTTGAGGCTGTTGCCTCGGCAGGC +
Preference number: 6 (lower is better)
Translates to: TFLDSLVARRGEPSG*AFGPLEVEAVASAG
Trigger: GCCTGCCGAGGCAACAGCCTCAACCTCTAGGGGTCCGAAGGCCAAGCCAGAAGGCTCTCCTCGGCGTGCCACCAATGAATCCAGAAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS CAA 72 bp GATTCATTGGTGGCACGCCGAGGAGAGCCTTCTGGCTaGGCCTTCGGACCCCTAGAGGTTGAGGCTGTTGCC +
Preference number: 6 (lower is better)
Translates to: DSLVARRGEPSG*AFGPLEVEAVA
Trigger: GGCAACAGCCTCAACCTCTAGGGGTCCGAAGGCCAAGCCAGAAGGCTCTCCTCGGCGTGCCACCAATGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS CAA 90 bp CTCCTCAGTATGGGTGGTCCCCCAGATCAAACCTTTCTGGATTCATaGGTGGCACGCCGAGGAGAGCCTTCTGGCTTGGCCTTCGGACCC +
Preference number: 6 (lower is better)
Translates to: LLSMGGPPDQTFLDS*VARRGEPSGLAFGP
Trigger: GGGTCCGAAGGCCAAGCCAGAAGGCTCTCCTCGGCGTGCCACCAATGAATCCAGAAAGGTTTGATCTGGGGGACCACCCATACTGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS CCA 72 bp GTGGTCCCCCAGATCAAACCTTTCTGGATTCATTGGTaGCACGCCGAGGAGAGCCTTCTGGCTTGGCCTTCG +
Preference number: 6 (lower is better)
Translates to: VVPQIKPFWIHW*HAEESLLAWPS
Trigger: CGAAGGCCAAGCCAGAAGGCTCTCCTCGGCGTGCCACCAATGAATCCAGAAAGGTTTGATCTGGGGGACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS CCA 72 bp TGGGTGGTCCCCCAGATCAAACCTTTCTGGATTCATTaGTGGCACGCCGAGGAGAGCCTTCTGGCTTGGCCT +
Preference number: 6 (lower is better)
Translates to: WVVPQIKPFWIH*WHAEESLLAWP
Trigger: AGGCCAAGCCAGAAGGCTCTCCTCGGCGTGCCACCAATGAATCCAGAAAGGTTTGATCTGGGGGACCACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS CAA 72 bp ATGGGTGGTCCCCCAGATCAAACCTTTCTGGATTCATaGGTGGCACGCCGAGGAGAGCCTTCTGGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: MGGPPDQTFLDS*VARRGEPSGLA
Trigger: GGCCAAGCCAGAAGGCTCTCCTCGGCGTGCCACCAATGAATCCAGAAAGGTTTGATCTGGGGGACCACCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS GCA 72 bp TGGGGAGAGGACCCCATTCAAGGTCTCCTCAATTTCTaGCTGCCCACAGTCCTCTGGGATGCCTGTGACCAA +
Preference number: 6 (lower is better)
Translates to: WGEDPIQGLLNF*LPTVLWDACDQ
Trigger: TTGGTCACAGGCATCCCAGAGGACTGTGGGCAGGCAGAAATTGAGGAGACCTTGAATGGGGTCCTCTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313683.15
ENST00000438932.2
ENST00000602246.1
CDS CCA 72 bp CCAGCCCTGCGAACCAAAGGTTTGGTAGGCTCATGCTaGTCTTCCGTGGCATTCCAGTTGTTGGGGGTCTCT +
Preference number: 6 (lower is better)
Translates to: PALRTKGLVGSC*SSVAFQLLGVS
Trigger: AGAGACCCCCAACAACTGGAATGCCACGGAAGACCAGCATGAGCCTACCAAACCTTTGGTTCGCAGGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS CAA 72 bp GAGCGAGACTTAGCTCCAGCCCTGCGAACCAAAGGTTaGGTAGGCTCATGCTGGTCTTCCGTGGCATTCCAG +
Preference number: 6 (lower is better)
Translates to: ERDLAPALRTKG*VGSCWSSVAFQ
Trigger: CTGGAATGCCACGGAAGACCAGCATGAGCCTACCAAACCTTTGGTTCGCAGGGCTGGAGCTAAGTCTCGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS CAA 72 bp GGTTCTTGGCAGACACCCAGGCCACGGCCTTCTTCTTaGGTGGGCTTTCATGGCCACCATCTTGGTCTGACT +
Preference number: 6 (lower is better)
Translates to: GSWQTPRPRPSS*VGFHGHHLGLT
Trigger: AGTCAGACCAAGATGGTGGCCATGAAAGCCCACCAAAGAAGAAGGCCGTGGCCTGGGTGTCTGCCAAGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS CAA 90 bp TTTCTCCTGGAGCGAGACTTAGCTCCAGCCCTGCGAACCAAAGGTTaGGTAGGCTCATGCTGGTCTTCCGTGGCATTCCAGTTGTTGGGG +
Preference number: 6 (lower is better)
Translates to: FLLERDLAPALRTKG*VGSCWSSVAFQLLG
Trigger: CCCCAACAACTGGAATGCCACGGAAGACCAGCATGAGCCTACCAAACCTTTGGTTCGCAGGGCTGGAGCTAAGTCTCGCTCCAGGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS GCA 72 bp GAGAGGACCCCATTCAAGGTCTCCTCAATTTCTGCCTaGCCACAGTCCTCTGGGATGCCTGTGACCAACAAG +
Preference number: 6 (lower is better)
Translates to: ERTPFKVSSISA*PQSSGMPVTNK
Trigger: CTTGTTGGTCACAGGCATCCCAGAGGACTGTGGGCAGGCAGAAATTGAGGAGACCTTGAATGGGGTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313683.15
ENST00000438932.2
ENST00000602246.1
CDS CAA 72 bp GTAGGCTCATGCTGGTCTTCCGTGGCATTCCAGTTGTaGGGGGTCTCTGCCTTTAAGGCAGAACCCACCTCT +
Preference number: 6 (lower is better)
Translates to: VGSCWSSVAFQL*GVSAFKAEPTS
Trigger: AGAGGTGGGTTCTGCCTTAAAGGCAGAGACCCCCAACAACTGGAATGCCACGGAAGACCAGCATGAGCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS CAA 72 bp TTGGTAGGCTCATGCTGGTCTTCCGTGGCATTCCAGTaGTTGGGGGTCTCTGCCTTTAAGGCAGAACCCACC +
Preference number: 6 (lower is better)
Translates to: LVGSCWSSVAFQ*LGVSAFKAEPT
Trigger: GGTGGGTTCTGCCTTAAAGGCAGAGACCCCCAACAACTGGAATGCCACGGAAGACCAGCATGAGCCTACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS CAA 90 bp AAAGGTTTGGTAGGCTCATGCTGGTCTTCCGTGGCATTCCAGTTGTaGGGGGTCTCTGCCTTTAAGGCAGAACCCACCTCTGCTGCAAGC +
Preference number: 6 (lower is better)
Translates to: KGLVGSCWSSVAFQL*GVSAFKAEPTSAAS
Trigger: GCTTGCAGCAGAGGTGGGTTCTGCCTTAAAGGCAGAGACCCCCAACAACTGGAATGCCACGGAAGACCAGCATGAGCCTACCAAACCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS CAA 90 bp ACCAAAGGTTTGGTAGGCTCATGCTGGTCTTCCGTGGCATTCCAGTaGTTGGGGGTCTCTGCCTTTAAGGCAGAACCCACCTCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: TKGLVGSCWSSVAFQ*LGVSAFKAEPTSAA
Trigger: TGCAGCAGAGGTGGGTTCTGCCTTAAAGGCAGAGACCCCCAACAACTGGAATGCCACGGAAGACCAGCATGAGCCTACCAAACCTTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS CAA 90 bp GGGCCTTCTGATCTGATGCCTCCCTTCTTGAGCCTGGCCCTTTCTTaGGCATCACCGGCTTCTTCCTGCCATCTTCTGAGTCAACCAAGA +
Preference number: 6 (lower is better)
Translates to: GPSDLMPPFLSLALS*ASPASSCHLLSQPR
Trigger: TCTTGGTTGACTCAGAAGATGGCAGGAAGAAGCCGGTGATGCCAAAGAAAGGGCCAGGCTCAAGAAGGGAGGCATCAGATCAGAAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS TCA 72 bp CAATTTCTGCCTGCCCACAGTCCTCTGGGATGCCTGTaGCCAACAAGGACCTGTGGATGTCCACTTCCATTC +
Preference number: 6 (lower is better)
Translates to: QFLPAHSPLGCL*PTRTCGCPLPF
Trigger: GAATGGAAGTGGACATCCACAGGTCCTTGTTGGTCACAGGCATCCCAGAGGACTGTGGGCAGGCAGAAATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313683.15
ENST00000438932.2
ENST00000602246.1
CDS GCA 72 bp AGCCTGGCCCTTTCTTTGGCATCACCGGCTTCTTCCTaGCATCTTCTGAGTCAACCAAGACGTAGGAGACAG +
Preference number: 6 (lower is better)
Translates to: SLALSLASPASS*HLLSQPRRRRQ
Trigger: CTGTCTCCTACGTCTTGGTTGACTCAGAAGATGGCAGGAAGAAGCCGGTGATGCCAAAGAAAGGGCCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS CCA 72 bp CACAAAAATCTTGTTGAGCACGCGGTACGGGCCCAGTaGGGAGAGGACCCCATTCAAGGTCTCCTCAATTTC +
Preference number: 6 (lower is better)
Translates to: HKNLVEHAVRAQ*GEDPIQGLLNF
Trigger: GAAATTGAGGAGACCTTGAATGGGGTCCTCTCCCCACTGGGCCCGTACCGCGTGCTCAACAAGATTTTTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313683.15
ENST00000438932.2
ENST00000602246.1
CDS CCA 72 bp GTGGCTCTCTGGGACCCTTCCAGGCACATTTCGCCATaGGCTTCTTCAAAGCCAACTCCTCCTTATTCACAC +
Preference number: 6 (lower is better)
Translates to: VALWDPSRHISP*ASSKPTPPYSH
Trigger: GTGTGAATAAGGAGGAGTTGGCTTTGAAGAAGCCCATGGCGAAATGTGCCTGGAAGGGTCCCAGAGAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS CAA 72 bp AGGGCAGCTTTAACATTCTCTTCCCTCACAAAAATCTaGTTGAGCACGCGGTACGGGCCCAGTGGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: RAALTFSSLTKI*LSTRYGPSGER
Trigger: CCTCTCCCCACTGGGCCCGTACCGCGTGCTCAACAAGATTTTTGTGAGGGAAGAGAATGTTAAAGCTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313683.15
ENST00000438932.2
ENST00000602246.1
CDS CAA 72 bp GATCTGATGCCTCCCTTCTTGAGCCTGGCCCTTTCTTaGGCATCACCGGCTTCTTCCTGCCATCTTCTGAGT +
Preference number: 6 (lower is better)
Translates to: DLMPPFLSLALS*ASPASSCHLLS
Trigger: ACTCAGAAGATGGCAGGAAGAAGCCGGTGATGCCAAAGAAAGGGCCAGGCTCAAGAAGGGAGGCATCAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS TCA 72 bp ACTCCTCCTTATTCACACAGGGCTTTCTGCTGCCCTTaGTCGGCTCTGAGATCGCCATGCTTTCAGCATCAC +
Preference number: 6 (lower is better)
Translates to: TPPYSHRAFCCP*SALRSPCFQHH
Trigger: GTGATGCTGAAAGCATGGCGATCTCAGAGCCGATCAAGGGCAGCAGAAAGCCCTGTGTGAATAAGGAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS TCA 72 bp TTTCTTTGGCATCACCGGCTTCTTCCTGCCATCTTCTaGGTCAACCAAGACGTAGGAGACAGGGCCCAAGCT +
Preference number: 6 (lower is better)
Translates to: FLWHHRLLPAIF*VNQDVGDRAQA
Trigger: AGCTTGGGCCCTGTCTCCTACGTCTTGGTTGACTCAGAAGATGGCAGGAAGAAGCCGGTGATGCCAAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS CAA 90 bp TTCAAAGCCAACTCCTCCTTATTCACACAGGGCTTTCTGCTGCCCTaGATCGGCTCTGAGATCGCCATGCTTTCAGCATCACCCACCTCA +
Preference number: 6 (lower is better)
Translates to: FKANSSLFTQGFLLP*IGSEIAMLSASPTS
Trigger: TGAGGTGGGTGATGCTGAAAGCATGGCGATCTCAGAGCCGATCAAGGGCAGCAGAAAGCCCTGTGTGAATAAGGAGGAGTTGGCTTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313683.15
ENST00000438932.2
CDS CCA 72 bp TCCTCAGTATGGGTGGTCCCCCAGATCAAACCTTTCTaGATTCTCAATGAGGGCAGCTTTAACATTCTCTTC +
Preference number: 6 (lower is better)
Translates to: SSVWVVPQIKPF*ILNEGSFNILF
Trigger: GAAGAGAATGTTAAAGCTGCCCTCATTGAGAATCCAGAAAGGTTTGATCTGGGGGACCACCCATACTGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602246.1
CDS CCA 72 bp TACTTCTTCCTTGTTCTTTCAACTCCTCAGTATGGGTaGTCCCCCAGATCAAACCTTTCTGGATTCATTGGT +
Preference number: 6 (lower is better)
Translates to: YFFLVLSTPQYG*SPRSNLSGFIG
Trigger: ACCAATGAATCCAGAAAGGTTTGATCTGGGGGACCACCCATACTGAGGAGTTGAAAGAACAAGGAAGAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS CCA 72 bp TTGGTACTTCTTCCTTGTTCTTTCAACTCCTCAGTATaGGTGGTCCCCCAGATCAAACCTTTCTGGATTCAT +
Preference number: 6 (lower is better)
Translates to: LVLLPCSFNSSV*VVPQIKPFWIH
Trigger: ATGAATCCAGAAAGGTTTGATCTGGGGGACCACCCATACTGAGGAGTTGAAAGAACAAGGAAGAAGTACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313683.15
CDS CCA 72 bp TACTTCTTCCTTGTTCTTTCAACTCCTCAGTATGGGTaGTCCCCCAGATCAAACCTTTCTGGATTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: YFFLVLSTPQYG*SPRSNLSGFFF
Trigger: GAAGAAGAATCCAGAAAGGTTTGATCTGGGGGACCACCCATACTGAGGAGTTGAAAGAACAAGGAAGAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438932.2
CDS CCA 72 bp TTGGTACTTCTTCCTTGTTCTTTCAACTCCTCAGTATaGGTGGTCCCCCAGATCAAACCTTTCTGGATTCTT +
Preference number: 6 (lower is better)
Translates to: LVLLPCSFNSSV*VVPQIKPFWIL
Trigger: AAGAATCCAGAAAGGTTTGATCTGGGGGACCACCCATACTGAGGAGTTGAAAGAACAAGGAAGAAGTACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438932.2