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Pregenerated sensors for PNMA6F (Homo sapiens)

Ensembl gene IDs: ENSG00000225110

Ensembl transcript IDs: ENST00000436629.3

Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTCACGGGCACCATCGTGGTCATGCTCACCATAGCAGTCACAGGATaGGCGTCCATCGTGCCCTGGCGCCTCCTTCCACCATCTCCCAGG +
Preference number: 1 (lower is better)
Translates to: VTGTIVVMLTIAVTG*ASIVPWRLLPPSPR
Trigger: CCTGGGAGATGGTGGAAGGAGGCGCCAGGGCACGATGGACGCTCATCCTGTGACTGCTATGGTGAGCATGACCACGATGGTGCCCGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436629.3
3UTR TCA 72 bp ACCATCGTGGTCATGCTCACCATAGCAGTCACAGGATaGGCGTCCATCGTGCCCTGGCGCCTCCTTCCACCA +
Preference number: 3 (lower is better)
Translates to: TIVVMLTIAVTG*ASIVPWRLLPP
Trigger: TGGTGGAAGGAGGCGCCAGGGCACGATGGACGCTCATCCTGTGACTGCTATGGTGAGCATGACCACGATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436629.3
CDS GCA 90 bp TGGAGCAGGAGGGTGGAAGATCTCGCCTCAGTCACGCGGCCGCGCTaGGCAGCGCAGGGGTCTCCAAAGCCCGCTGTGCTAAGACTACAG +
Preference number: 5 (lower is better)
Translates to: WSRRVEDLASVTRPR*AAQGSPKPAVLRLQ
Trigger: CTGTAGTCTTAGCACAGCGGGCTTTGGAGACCCCTGCGCTGCGCAGCGCGGCCGCGTGACTGAGGCGAGATCTTCCACCCTCCTGCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436629.3
CDS TCA 90 bp AGCAGAGAGCGCTCTGCGTTCACACCCATCCTCCTGCACCAGTCCTaGAGCATCGCCAGAGCTATCGCAGAGGACTTGAGGGAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: SRERSAFTPILLHQS*SIARAIAEDLREGA
Trigger: GGCTCCCTCCCTCAAGTCCTCTGCGATAGCTCTGGCGATGCTTCAGGACTGGTGCAGGAGGATGGGTGTGAACGCAGAGCGCTCTCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436629.3
CDS GCA 90 bp AACTTCATCCGCGAGGTCATCCATGTATCCCGGCTCCTAAACACCTaGCCCAGCGCCGTCAGGCAGTCCTGCGCAGAGAAGTCTGGATCT +
Preference number: 5 (lower is better)
Translates to: NFIREVIHVSRLLNT*PSAVRQSCAEKSGS
Trigger: AGATCCAGACTTCTCTGCGCAGGACTGCCTGACGGCGCTGGGGCAGGTGTTTAGGAGCCGGGATACATGGATGACCTCGCGGATGAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436629.3
CDS GCA 72 bp AGGGTGGAAGATCTCGCCTCAGTCACGCGGCCGCGCTaGGCAGCGCAGGGGTCTCCAAAGCCCGCTGTGCTA +
Preference number: 6 (lower is better)
Translates to: RVEDLASVTRPR*AAQGSPKPAVL
Trigger: TAGCACAGCGGGCTTTGGAGACCCCTGCGCTGCGCAGCGCGGCCGCGTGACTGAGGCGAGATCTTCCACCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436629.3
CDS GCA 72 bp CGCGAGGTCATCCATGTATCCCGGCTCCTAAACACCTaGCCCAGCGCCGTCAGGCAGTCCTGCGCAGAGAAG +
Preference number: 6 (lower is better)
Translates to: REVIHVSRLLNT*PSAVRQSCAEK
Trigger: CTTCTCTGCGCAGGACTGCCTGACGGCGCTGGGGCAGGTGTTTAGGAGCCGGGATACATGGATGACCTCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436629.3
CDS CAA 72 bp AAGGCTGCCCTGGCCCCGAGCTCCTTTCTGAAGACCTaGATGAGCACTCGGTACCTGCCCAGGGGCGACAGG +
Preference number: 6 (lower is better)
Translates to: KAALAPSSFLKT*MSTRYLPRGDR
Trigger: CCTGTCGCCCCTGGGCAGGTACCGAGTGCTCATCAAGGTCTTCAGAAAGGAGCTCGGGGCCAGGGCAGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436629.3
CDS GCA 72 bp TGCCTCACCTGCTGCTCCTGCCTCACCTACACCTCCTaGCTCACCTATACCTCCTGCCTCATCTTCACCTGC +
Preference number: 6 (lower is better)
Translates to: CLTCCSCLTYTS*LTYTSCLIFTC
Trigger: GCAGGTGAAGATGAGGCAGGAGGTATAGGTGAGGCAGGAGGTGTAGGTGAGGCAGGAGCAGCAGGTGAGGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436629.3
CDS TCA 72 bp ACTCATGTTCCTCGCAGTCGTCAGGGATATCCAGGATaGGCAGAGAGCGCTCTGCGTTCACACCCATCCTCC +
Preference number: 6 (lower is better)
Translates to: THVPRSRQGYPG*AESALRSHPSS
Trigger: GGAGGATGGGTGTGAACGCAGAGCGCTCTCTGCTCATCCTGGATATCCCTGACGACTGCGAGGAACATGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436629.3
CDS CCA 72 bp CCCCCTTTGCCTGCTATTTGGCGGGGAATCAAGCTTTaGTTTAAACCCTCAGCGAATTCCACCAAGGCTGCC +
Preference number: 6 (lower is better)
Translates to: PPLPAIWRGIKL*FKPSANSTKAA
Trigger: GGCAGCCTTGGTGGAATTCGCTGAGGGTTTAAACCAAAGCTTGATTCCCCGCCAAATAGCAGGCAAAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436629.3