RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PNMA6A (Homo sapiens)

Ensembl gene IDs: ENSG00000235961

Ensembl transcript IDs: ENST00000421798.5

Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CTCCAAACACCTGGGCCAGGGCCGCCAGACAGTCCTGCGCCGTCCTaGCGGGGTTCTCCGCCAGGAGCGCGTGCACGAGCTGCAGGGCGG +
Preference number: 5 (lower is better)
Translates to: LQTPGPGPPDSPAPS*RGSPPGARARAAGR
Trigger: CCGCCCTGCAGCTCGTGCACGCGCTCCTGGCGGAGAACCCCGCCAGGACGGCGCAGGACTGTCTGGCGGCCCTGGCCCAGGTGTTTGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS GCA 90 bp CCCAGGGCTGGACCGCCTGACCGATGGATCGCAGCCAGCACACCCTaGGCAGCCCCACACCCAGGGCGCCGGCCACGCTCTCCACCATCT +
Preference number: 5 (lower is better)
Translates to: PRAGPPDRWIAASTP*AAPHPGRRPRSPPS
Trigger: AGATGGTGGAGAGCGTGGCCGGCGCCCTGGGTGTGGGGCTGCGCAGGGTGTGCTGGCTGCGATCCATCGGTCAGGCGGTCCAGCCCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS GCA 90 bp TGCGCCGTCCTGGCGGGGTTCTCCGCCAGGAGCGCGTGCACGAGCTaGAGGGCGGTCCCACGCAAGCCTTCCAGCAGCCTCCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: CAVLAGFSARSACTS*RAVPRKPSSSLLLL
Trigger: GAGGAGGAGGAGGCTGCTGGAAGGCTTGCGTGGGACCGCCCTGCAGCTCGTGCACGCGCTCCTGGCGGAGAACCCCGCCAGGACGGCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS CCA 90 bp CACTTCACCCGGATGGTCGCCTGGGACTCGTTGTCTCCAAACACCTaGGCCAGGGCCGCCAGACAGTCCTGCGCCGTCCTGGCGGGGTTC +
Preference number: 5 (lower is better)
Translates to: HFTRMVAWDSLSPNT*ARAARQSCAVLAGF
Trigger: GAACCCCGCCAGGACGGCGCAGGACTGTCTGGCGGCCCTGGCCCAGGTGTTTGGAGACAACGAGTCCCAGGCGACCATCCGGGTGAAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS CCA 90 bp GCGCCGGCCACGCTCTCCACCATCTGCCCCTCTTGCTCCGGGAAGTaGAACACGCGACCGAGACCGAGAAACTCCTCGCCTGAGCAACGG +
Preference number: 5 (lower is better)
Translates to: APATLSTICPSCSGK*NTRPRPRNSSPEQR
Trigger: CCGTTGCTCAGGCGAGGAGTTTCTCGGTCTCGGTCGCGTGTTCCACTTCCCGGAGCAAGAGGGGCAGATGGTGGAGAGCGTGGCCGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS CCA 90 bp GACGCTCGCCTGACTGCTGCTGAGCGGTCAGACACTTCACCCGGATaGTCGCCTGGGACTCGTTGTCTCCAAACACCTGGGCCAGGGCCG +
Preference number: 5 (lower is better)
Translates to: DARLTAAERSDTSPG*SPGTRCLQTPGPGP
Trigger: CGGCCCTGGCCCAGGTGTTTGGAGACAACGAGTCCCAGGCGACCATCCGGGTGAAGTGTCTGACCGCTCAGCAGCAGTCAGGCGAGCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS CCA 90 bp GGCGCACGCGGTCGGCGGATGCTCTGGCCAGGGCCTCCTTCTCCATaGCCTTCTGCAGCAGCACTTCCAGCCGCAACACGAAAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: GARGRRMLWPGPPSP*PSAAALPAATRKLR
Trigger: TCTCAGCTTTCGTGTTGCGGCTGGAAGTGCTGCTGCAGAAGGCCATGGAGAAGGAGGCCCTGGCCAGAGCATCCGCCGACCGCGTGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS GCA 90 bp CGGTCGGCGGATGCTCTGGCCAGGGCCTCCTTCTCCATGGCCTTCTaGAGCAGCACTTCCAGCCGCAACACGAAAGCTGAGAGACGCTCG +
Preference number: 5 (lower is better)
Translates to: RSADALARASFSMAF*SSTSSRNTKAERRS
Trigger: CGAGCGTCTCTCAGCTTTCGTGTTGCGGCTGGAAGTGCTGCTGCAGAAGGCCATGGAGAAGGAGGCCCTGGCCAGAGCATCCGCCGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS GCA 72 bp GGACCGCCTGACCGATGGATCGCAGCCAGCACACCCTaGGCAGCCCCACACCCAGGGCGCCGGCCACGCTCT +
Preference number: 6 (lower is better)
Translates to: GPPDRWIAASTP*AAPHPGRRPRS
Trigger: AGAGCGTGGCCGGCGCCCTGGGTGTGGGGCTGCGCAGGGTGTGCTGGCTGCGATCCATCGGTCAGGCGGTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS GCA 72 bp TGCGCCGTCCTGGCGGGGTTCTCCGCCAGGAGCGCGTaGACGAGCTGCAGGGCGGTCCCACGCAAGCCTTCC +
Preference number: 6 (lower is better)
Translates to: CAVLAGFSARSA*TSCRAVPRKPS
Trigger: GGAAGGCTTGCGTGGGACCGCCCTGCAGCTCGTGCACGCGCTCCTGGCGGAGAACCCCGCCAGGACGGCGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS CCA 72 bp GCTGGCTGGTCCCTCCCGGAAAACACGCCCAGGCTCTaGCACCTCACGGCCTCCACCCAGGGCTGGACCGCC +
Preference number: 6 (lower is better)
Translates to: AGWSLPENTPRL*HLTASTQGWTA
Trigger: GGCGGTCCAGCCCTGGGTGGAGGCCGTGAGGTGCCAGAGCCTGGGCGTGTTTTCCGGGAGGGACCAGCCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS TCA 72 bp TGGCACCTCACGGCCTCCACCCAGGGCTGGACCGCCTaGCCGATGGATCGCAGCCAGCACACCCTGCGCAGC +
Preference number: 6 (lower is better)
Translates to: WHLTASTQGWTA*PMDRSQHTLRS
Trigger: GCTGCGCAGGGTGTGCTGGCTGCGATCCATCGGTCAGGCGGTCCAGCCCTGGGTGGAGGCCGTGAGGTGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS CCA 72 bp TCACGGCCTCCACCCAGGGCTGGACCGCCTGACCGATaGATCGCAGCCAGCACACCCTGCGCAGCCCCACAC +
Preference number: 6 (lower is better)
Translates to: SRPPPRAGPPDR*IAASTPCAAPH
Trigger: GTGTGGGGCTGCGCAGGGTGTGCTGGCTGCGATCCATCGGTCAGGCGGTCCAGCCCTGGGTGGAGGCCGTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS CAA 90 bp TCACAGTCCTCCGGGATGCCCAGGATGAGCAGGCCCCTGCGAGCGTaGACCCCCATCCACCGGCACCAGTCCTGCAGCATGGTCACCGCC +
Preference number: 6 (lower is better)
Translates to: SQSSGMPRMSRPLRA*TPIHRHQSCSMVTA
Trigger: GGCGGTGACCATGCTGCAGGACTGGTGCCGGTGGATGGGGGTCAACGCTCGCAGGGGCCTGCTCATCCTGGGCATCCCGGAGGACTGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS GCA 72 bp CTGCGAGCGTTGACCCCCATCCACCGGCACCAGTCCTaGAGCATGGTCACCGCCATGCCCGCGATTCTGGCC +
Preference number: 6 (lower is better)
Translates to: LRALTPIHRHQS*SMVTAMPAILA
Trigger: GGCCAGAATCGCGGGCATGGCGGTGACCATGCTGCAGGACTGGTGCCGGTGGATGGGGGTCAACGCTCGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS GCA 72 bp AGGGCGCCGGCCACGCTCTCCACCATCTGCCCCTCTTaGTCCGGGAAGTGGAACACGCGACCGAGACCGAGA +
Preference number: 6 (lower is better)
Translates to: RAPATLSTICPS*SGKWNTRPRPR
Trigger: TCTCGGTCTCGGTCGCGTGTTCCACTTCCCGGAGCAAGAGGGGCAGATGGTGGAGAGCGTGGCCGGCGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS GCA 72 bp GGTGAGCATCTGCCTCAGGCGCACGCGGTCGGCGGATaGTCTGGCCAGGGCCTCCTTCTCCATGGCCTTCTG +
Preference number: 6 (lower is better)
Translates to: GEHLPQAHAVGG*SGQGLLLHGLL
Trigger: CAGAAGGCCATGGAGAAGGAGGCCCTGGCCAGAGCATCCGCCGACCGCGTGCGCCTGAGGCAGATGCTCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS GCA 72 bp TCCAGAGGCTCAGTAAGGTGGGCCCTGGTGAGCATCTaGCTCAGGCGCACGCGGTCGGCGGATGCTCTGGCC +
Preference number: 6 (lower is better)
Translates to: SRGSVRWALVSI*LRRTRSADALA
Trigger: GGCCAGAGCATCCGCCGACCGCGTGCGCCTGAGGCAGATGCTCACCAGGGCCCACCTTACTGAGCCTCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS CCA 72 bp CGGATGGTCGCCTGGGACTCGTTGTCTCCAAACACCTaGGCCAGGGCCGCCAGACAGTCCTGCGCCGTCCTG +
Preference number: 6 (lower is better)
Translates to: RMVAWDSLSPNT*ARAARQSCAVL
Trigger: CAGGACGGCGCAGGACTGTCTGGCGGCCCTGGCCCAGGTGTTTGGAGACAACGAGTCCCAGGCGACCATCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS CCA 72 bp GCATCTGCCTCAGGCGCACGCGGTCGGCGGATGCTCTaGCCAGGGCCTCCTTCTCCATGGCCTTCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: ASASGARGRRML*PGPPSPWPSAA
Trigger: TGCTGCAGAAGGCCATGGAGAAGGAGGCCCTGGCCAGAGCATCCGCCGACCGCGTGCGCCTGAGGCAGATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS CAA 72 bp TCCGGGATGCCCAGGATGAGCAGGCCCCTGCGAGCGTaGACCCCCATCCACCGGCACCAGTCCTGCAGCATG +
Preference number: 6 (lower is better)
Translates to: SGMPRMSRPLRA*TPIHRHQSCSM
Trigger: CATGCTGCAGGACTGGTGCCGGTGGATGGGGGTCAACGCTCGCAGGGGCCTGCTCATCCTGGGCATCCCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS CAA 72 bp GTCAGACACTTCACCCGGATGGTCGCCTGGGACTCGTaGTCTCCAAACACCTGGGCCAGGGCCGCCAGACAG +
Preference number: 6 (lower is better)
Translates to: VRHFTRMVAWDS*SPNTWARAARQ
Trigger: CTGTCTGGCGGCCCTGGCCCAGGTGTTTGGAGACAACGAGTCCCAGGCGACCATCCGGGTGAAGTGTCTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS CCA 72 bp ACGCTCTCCACCATCTGCCCCTCTTGCTCCGGGAAGTaGAACACGCGACCGAGACCGAGAAACTCCTCGCCT +
Preference number: 6 (lower is better)
Translates to: TLSTICPSCSGK*NTRPRPRNSSP
Trigger: AGGCGAGGAGTTTCTCGGTCTCGGTCGCGTGTTCCACTTCCCGGAGCAAGAGGGGCAGATGGTGGAGAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS CCA 72 bp TGTCCCATAGGCCTCAGGGCAGCCTCGAGGGACTCTTaGAATTCGGCATCATCACAGTCCTCCGGGATGCCC +
Preference number: 6 (lower is better)
Translates to: CPIGLRAASRDS*NSASSQSSGMP
Trigger: GGGCATCCCGGAGGACTGTGATGATGCCGAATTCCAAGAGTCCCTCGAGGCTGCCCTGAGGCCTATGGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421798.5
CDS CCA 72 bp CTGACTGCTGCTGAGCGGTCAGACACTTCACCCGGATaGTCGCCTGGGACTCGTTGTCTCCAAACACCTGGG +
Preference number: 6 (lower is better)
Translates to: LTAAERSDTSPG*SPGTRCLQTPG
Trigger: CCCAGGTGTTTGGAGACAACGAGTCCCAGGCGACCATCCGGGTGAAGTGTCTGACCGCTCAGCAGCAGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421798.5