Pregenerated sensors for PNMA1 (Homo sapiens)
Ensembl gene IDs: ENSG00000176903Ensembl transcript IDs: ENST00000316836.5
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACACTCAGTATGAACAAGAACTATTCTCTGACAAAGATGTGAAATaGGGGAGTGAATTACTGTACAGGTGCATATCAACCTCTCCATGC | + |
|
Preference number: 1 (lower is better) Translates to: NTQYEQELFSDKDVK*GSELLYRCISTSPC Trigger: GCATGGAGAGGTTGATATGCACCTGTACAGTAATTCACTCCCCCATTTCACATCTTTGTCAGAGAATAGTTCTTGTTCATACTGAGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| 3UTR TCA 90 bp | GTTATCAGTAATCTAACAGTGCATACTTTTACTGAACACTTCCTGTaGGCCAGGCCTCGTAGTAAACATCTGAACATGCAATTTCACATT | + |
|
Preference number: 1 (lower is better) Translates to: VISNLTVHTFTEHFL*ARPRSKHLNMQFHI Trigger: AATGTGAAATTGCATGTTCAGATGTTTACTACGAGGCCTGGCTCACAGGAAGTGTTCAGTAAAAGTATGCACTGTTAGATTACTGATAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| 3UTR GCA 90 bp | TTCTCTGACAAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGTaGATATCAACCTCTCCATGCAATTTACATCTGTATCTTATGCAA | + |
|
Preference number: 1 (lower is better) Translates to: FSDKDVKWGSELLYR*ISTSPCNLHLYLMQ Trigger: TTGCATAAGATACAGATGTAAATTGCATGGAGAGGTTGATATGCACCTGTACAGTAATTCACTCCCCCATTTCACATCTTTGTCAGAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| 3UTR-3UTR TCA 90 bp | AAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGTGCATATCAACCTCTCCAACTGAACACTTCCTGTaGGCCAGGCCTCGTAGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: KDVKWGSELLYRCISTSPTEHFL*ARPRSK Trigger: TTTACTACGAGGCCTGGCTCACAGGAAGTGTTCAGT...TGGAGAGGTTGATATGCACCTGTACAGTAATTCACTCCCCCATTTCACATCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| 3UTR-3UTR TCA 90 bp | CAAGAACTATTCTCTGACAAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGAGTGCATACTTTTACTaGACACTTCCTGTGAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: QELFSDKDVKWGSELLYRSAYFY*TLPVSQ Trigger: CTGGCTCACAGGAAGTGTTCAGTAAAAGTATGCACT...CCTGTACAGTAATTCACTCCCCCATTTCACATCTTTGTCAGAGAATAGTTCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| 3UTR-3UTR CCA 90 bp | AAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGTGCATATCAACCTCTCCATATGCAATGAGAAACTaGTTTACACAGCTCCGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: KDVKWGSELLYRCISTSPYAMRN*FTQLRN Trigger: GTTACGGAGCTGTGTAAACCAGTTTCTCATTGCATA...TGGAGAGGTTGATATGCACCTGTACAGTAATTCACTCCCCCATTTCACATCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| 3UTR-3UTR TCA 90 bp | AAACATCTGAACATGCAATTTCACATTCAGTGTGGAATAAGAAGTGTCATAGGTATGAATACTCAGGCCTaGCTAACCTTCCCCTCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: KHLNMQFHIQCGIRSVIGMNTQA*LTFPSK Trigger: TTTGGAGGGGAAGGTTAGTCAGGCCTGAGTATTCAT...ACCTATGACACTTCTTATTCCACACTGAATGTGAAATTGCATGTTCAGATGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| 3UTR-3UTR CCA 90 bp | AAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGTGCATATCAACCTCTCCAATTTCACATTCAGTGTaGAATAAGAAGTGTCATAGG | + |
|
Preference number: 2 (lower is better) Translates to: KDVKWGSELLYRCISTSPISHSV*NKKCHR Trigger: CCTATGACACTTCTTATTCCACACTGAATGTGAAAT...TGGAGAGGTTGATATGCACCTGTACAGTAATTCACTCCCCCATTTCACATCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| 3UTR CCA 72 bp | AGACCCGCTTGCATTGCAGTCGTTCACGGTGCTCGCTaGCACAATTTTAGAATGTTACATGAATACTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RPACIAVVHGAR*HNFRMLHEYSG Trigger: GCCTGAGTATTCATGTAACATTCTAAAATTGTGCCAGCGAGCACCGTGAACGACTGCAATGCAAGCGGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| 3UTR TCA 72 bp | AATCTAACAGTGCATACTTTTACTGAACACTTCCTGTaGGCCAGGCCTCGTAGTAAACATCTGAACATGCAA | + |
|
Preference number: 3 (lower is better) Translates to: NLTVHTFTEHFL*ARPRSKHLNMQ Trigger: TTGCATGTTCAGATGTTTACTACGAGGCCTGGCTCACAGGAAGTGTTCAGTAAAAGTATGCACTGTTAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| 3UTR GCA 72 bp | AAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGTaGATATCAACCTCTCCATGCAATTTACATCTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: KDVKWGSELLYR*ISTSPCNLHLY Trigger: ATACAGATGTAAATTGCATGGAGAGGTTGATATGCACCTGTACAGTAATTCACTCCCCCATTTCACATCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR GCA 90 bp | TCACAACTGATTATGATGTCCATGATGACAGCGTGCACTAAGCGCTGTGTCCAAGGCGTCGCGTCGTCGTaGAGCGGGCGAGGAGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: SQLIMMSMMTACTKRCVQGVASS*SGRGAT Trigger: CGTCGCTCCTCGCCCGCTGCACGACGACGCGACGCC...TTGGACACAGCGCTTAGTGCACGCTGTCATCATGGACATCATAATCAGTTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CCA 90 bp | ACATCTGTAAGACCCCACAGGGACAAGAAAAGTAGCTGTGATCTAGGTCTGCACTCTTGCGTCTGGGTCTaGGTCCGGTCGGGTCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TSVRPHRDKKSSCDLGLHSCVWV*VRSGPP Trigger: CGGCGGACCCGACCGGACCCAGACCCAGACGCAAGA...GTGCAGACCTAGATCACAGCTACTTTTCTTGTCCCTGTGGGGTCTTACAGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR GCA 90 bp | AAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGTGCATATCAACCTCTCCACGAAGTCGCGGCGGCTaGGGGCCAGCGGAAAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KDVKWGSELLYRCISTSPRSRGG*GPAESG Trigger: GCCGCTTTCCGCTGGCCCGCAGCCGCCGCGACTTCG...TGGAGAGGTTGATATGCACCTGTACAGTAATTCACTCCCCCATTTCACATCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR TCA 90 bp | CAAGAACTATTCTCTGACAAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGCGAGCTCGGGGACGCTaGGGCAGTCACGCGGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QELFSDKDVKWGSELLYRRARGR*GSHAAV Trigger: GACGGCCGCGTGACTGCCTCAGCGTCCCCGAGCTCG...CCTGTACAGTAATTCACTCCCCCATTTCACATCTTTGTCAGAGAATAGTTCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CCA 90 bp | ACATCTGTAAGACCCCACAGGGACAAGAAAAGTAGCTGTGATCTAGGTCTGCACTCGGAGAAGCGAGGCTaGAGACAGCAGAGGCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSVRPHRDKKSSCDLGLHSEKRG*RQQRRG Trigger: CCCTCGCCTCTGCTGTCTCCAGCCTCGCTTCTCCGA...GTGCAGACCTAGATCACAGCTACTTTTCTTGTCCCTGTGGGGTCTTACAGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR GCA 90 bp | AAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGTGCATATCAACCTCTCCACAGGCGCTGCGCGGCTaGTCTGGCGTCCAGTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: KDVKWGSELLYRCISTSPQALRG*SGVQSY Trigger: GTAGGACTGGACGCCAGAGCAGCCGCGCAGCGCCTG...TGGAGAGGTTGATATGCACCTGTACAGTAATTCACTCCCCCATTTCACATCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR GCA 90 bp | CAAGAACTATTCTCTGACAAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGCAGCGGTTCAGGCGCTaGGCGGCTGCTCTGGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QELFSDKDVKWGSELLYRQRFRR*AAALAS Trigger: GGACGCCAGAGCAGCCGCGCAGCGCCTGAACCGCTG...CCTGTACAGTAATTCACTCCCCCATTTCACATCTTTGTCAGAGAATAGTTCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR GCA 90 bp | AAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGTGCATATCAACCTCTCCACGGCCGTCGCCATCTTaGGTCTGGGTCTGGGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KDVKWGSELLYRCISTSPRPSPS*VWVWVR Trigger: CCGGACCCAGACCCAGACGCAAGATGGCGACGGCCG...TGGAGAGGTTGATATGCACCTGTACAGTAATTCACTCCCCCATTTCACATCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR GCA 90 bp | ACATCTGTAAGACCCCACAGGGACAAGAAAAGTAGCTGTGATCTAGGTCTGCACCCTTCCAGGCCTAACTaGAGAAGGGTGGCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSVRPHRDKKSSCDLGLHPSRPN*RRVASA Trigger: GGCTGAGGCCACCCTTCTGCAGTTAGGCCTGGAAGG...GTGCAGACCTAGATCACAGCTACTTTTCTTGTCCCTGTGGGGTCTTACAGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CCA 90 bp | CAAGAACTATTCTCTGACAAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGCGGAAAGCGGCTTCTTaGCGGGCGCGGGGACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QELFSDKDVKWGSELLYRRKAAS*RARGLL Trigger: GAGGAGTCCCCGCGCCCGCCAAGAAGCCGCTTTCCG...CCTGTACAGTAATTCACTCCCCCATTTCACATCTTTGTCAGAGAATAGTTCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CCA 90 bp | CAAGAACTATTCTCTGACAAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGGCTCGCTGCGGCTCCTaGAGAGGATCGGGCGTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QELFSDKDVKWGSELLYRARCGS*RGSGVR Trigger: GCGAACGCCCGATCCTCTCCAGGAGCCGCAGCGAGC...CCTGTACAGTAATTCACTCCCCCATTTCACATCTTTGTCAGAGAATAGTTCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CCA 90 bp | AAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGTGCATATCAACCTCTCCACTCTGCTGGCATCTCTaGGCCCGGGGTCGGAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KDVKWGSELLYRCISTSPLCWHL*ARGRSR Trigger: CCTACTCCGACCCCGGGCCCAGAGATGCCAGCAGAG...TGGAGAGGTTGATATGCACCTGTACAGTAATTCACTCCCCCATTTCACATCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR TCA 90 bp | ACATCTGTAAGACCCCACAGGGACAAGAAAAGTAGCTGTGATCTAGGTCTGCACATCTGCACCAGCAACTaGAAGAGGTTTGGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSVRPHRDKKSSCDLGLHICTSN*KRFGAG Trigger: GCCAGCCCCAAACCTCTTTCAGTTGCTGGTGCAGAT...GTGCAGACCTAGATCACAGCTACTTTTCTTGTCCCTGTGGGGTCTTACAGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR GCA 90 bp | AAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGTGCATATCAACCTCTCCACAGAGGGAGAAACTGTaGCGAAGTCGCGGCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KDVKWGSELLYRCISTSPQREKL*RSRGGC Trigger: GCAGCCGCCGCGACTTCGGCACAGTTTCTCCCTCTG...TGGAGAGGTTGATATGCACCTGTACAGTAATTCACTCCCCCATTTCACATCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR GCA 90 bp | AAACATCTGAACATGCAATTTCACATTCAGTGTGGAATAAGAAGTGTCATAGGTCCGCCGGGCGCTCGCTaGGGCTCCTGGAGAGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: KHLNMQFHIQCGIRSVIGPPGAR*GSWRGS Trigger: CGATCCTCTCCAGGAGCCGCAGCGAGCGCCCGGCGG...ACCTATGACACTTCTTATTCCACACTGAATGTGAAATTGCATGTTCAGATGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR GCA 90 bp | TCACAACTGATTATGATGTCCATGATGACAGCGTGCACTAAGCGCTGTGTCCAACCTGGCACTCAGAAGTaGCCTTCCAGGCCTAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQLIMMSMMTACTKRCVQPGTQK*PSRPNC Trigger: GCAGTTAGGCCTGGAAGGGCACTTCTGAGTGCCAGG...TTGGACACAGCGCTTAGTGCACGCTGTCATCATGGACATCATAATCAGTTGTGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CCA 90 bp | AAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGTGCATATCAACCTCTCCACGAGGAGCGGCCGTTTaGGAGACTAGCCAGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KDVKWGSELLYRCISTSPRGAAV*ETSQRE Trigger: CTCCCTCTGGCTAGTCTCCCAAACGGCCGCTCCTCG...TGGAGAGGTTGATATGCACCTGTACAGTAATTCACTCCCCCATTTCACATCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CCA 90 bp | AAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGTGCATATCAACCTCTCCATCGCCATCTTGCGTCTaGGTCTGGGTCCGGTCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KDVKWGSELLYRCISTSPSPSCV*VWVRSG Trigger: ACCCGACCGGACCCAGACCCAGACGCAAGATGGCGA...TGGAGAGGTTGATATGCACCTGTACAGTAATTCACTCCCCCATTTCACATCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR GCA 90 bp | CAAGAACTATTCTCTGACAAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGCAGTCAGTCCGTAGGTaGACTCGGAGCCGAGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QELFSDKDVKWGSELLYRQSVRR*TRSRAR Trigger: CCGAGCTCGGCTCCGAGTGCACCTACGGACTGACTG...CCTGTACAGTAATTCACTCCCCCATTTCACATCTTTGTCAGAGAATAGTTCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CCA 90 bp | AAACATCTGAACATGCAATTTCACATTCAGTGTGGAATAAGAAGTGTCATAGGTGCTGCGCGGCTGCTCTaGCGTCCAGTCCTACCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KHLNMQFHIQCGIRSVIGAARLL*RPVLPA Trigger: TGCGGGTAGGACTGGACGCCAGAGCAGCCGCGCAGC...ACCTATGACACTTCTTATTCCACACTGAATGTGAAATTGCATGTTCAGATGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CCA 90 bp | AAACATCTGAACATGCAATTTCACATTCAGTGTGGAATAAGAAGTGTCATAGGTTTCGCGGTCGCAGCCTaGTCTTCCCGCGGGCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KHLNMQFHIQCGIRSVIGFAVAA*SSRGRG Trigger: TCCTCGCCCGCGGGAAGACCAGGCTGCGACCGCGAA...ACCTATGACACTTCTTATTCCACACTGAATGTGAAATTGCATGTTCAGATGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CCA 90 bp | CAAGAACTATTCTCTGACAAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGTCTACCAACAGACTGTaGCTCACCGTGCTCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QELFSDKDVKWGSELLYRSTNRL*LTVLLA Trigger: GGCCAGGAGCACGGTGAGCCACAGTCTGTTGGTAGA...CCTGTACAGTAATTCACTCCCCCATTTCACATCTTTGTCAGAGAATAGTTCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CCA 90 bp | CAAGAACTATTCTCTGACAAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGCAACTGAAAGAGGTTTaGGGCTGGCCCTTCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QELFSDKDVKWGSELLYRQLKEV*GWPFPS Trigger: GCTGGGGAAGGGCCAGCCCCAAACCTCTTTCAGTTG...CCTGTACAGTAATTCACTCCCCCATTTCACATCTTTGTCAGAGAATAGTTCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR TCA 90 bp | ACATCTGTAAGACCCCACAGGGACAAGAAAAGTAGCTGTGATCTAGGTCTGCACTGTGAAATGGGGGAGTaGATTACTGTACAGGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TSVRPHRDKKSSCDLGLHCEMGE*ITVQVH Trigger: ATGCACCTGTACAGTAATTCACTCCCCCATTTCACA...GTGCAGACCTAGATCACAGCTACTTTTCTTGTCCCTGTGGGGTCTTACAGATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR TCA 90 bp | TCACAACTGATTATGATGTCCATGATGACAGCGTGCACTAAGCGCTGTGTCCAAAGTGCATACTTTTACTaGACACTTCCTGTGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQLIMMSMMTACTKRCVQSAYFY*TLPVSQ Trigger: CTGGCTCACAGGAAGTGTTCAGTAAAAGTATGCACT...TTGGACACAGCGCTTAGTGCACGCTGTCATCATGGACATCATAATCAGTTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CCA 90 bp | AAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGTGCATATCAACCTCTCCAACTAACAGAGCTCTCTaGGAGTTCACATCCATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KDVKWGSELLYRCISTSPTNRAL*EFTSIP Trigger: GGGGATGGATGTGAACTCCCAGAGAGCTCTGTTAGT...TGGAGAGGTTGATATGCACCTGTACAGTAATTCACTCCCCCATTTCACATCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CCA 90 bp | AAACATCTGAACATGCAATTTCACATTCAGTGTGGAATAAGAAGTGTCATAGGTTTCCTCTCCAGGCCCTaGGATGTCCCTCCCCGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KHLNMQFHIQCGIRSVIGFLSRP*DVPPRE Trigger: TTCTCGGGGAGGGACATCCCAGGGCCTGGAGAGGAA...ACCTATGACACTTCTTATTCCACACTGAATGTGAAATTGCATGTTCAGATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR TCA 90 bp | AAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGTGCATATCAACCTCTCCAATGAATACTCAGGCCTaGCTAACCTTCCCCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KDVKWGSELLYRCISTSPMNTQA*LTFPSK Trigger: TTTGGAGGGGAAGGTTAGTCAGGCCTGAGTATTCAT...TGGAGAGGTTGATATGCACCTGTACAGTAATTCACTCCCCCATTTCACATCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR GCA 90 bp | CAAGAACTATTCTCTGACAAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGAGGACCTCATTAGTGTaGTCCAGCCAGGGATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QELFSDKDVKWGSELLYRRTSLV*SSQGSK Trigger: CTTTGATCCCTGGCTGGAGCACACTAATGAGGTCCT...CCTGTACAGTAATTCACTCCCCCATTTCACATCTTTGTCAGAGAATAGTTCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CCA 90 bp | TCACAACTGATTATGATGTCCATGATGACAGCGTGCACTAAGCGCTGTGTCCAACATTATCTTTATCAATaGCCCCCTTCTCTACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SQLIMMSMMTACTKRCVQHYLYQ*PPSLPP Trigger: AGGTGGTAGAGAAGGGGGCCATTGATAAAGATAATG...TTGGACACAGCGCTTAGTGCACGCTGTCATCATGGACATCATAATCAGTTGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR TCA 90 bp | TCACAACTGATTATGATGTCCATGATGACAGCGTGCACTAAGCGCTGTGTCCAACTGTATCTTATGCAATaGGAAACTGGTTTACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQLIMMSMMTACTKRCVQLYLMQ*ETGLHS Trigger: GCTGTGTAAACCAGTTTCTCATTGCATAAGATACAG...TTGGACACAGCGCTTAGTGCACGCTGTCATCATGGACATCATAATCAGTTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR TCA 90 bp | AAACATCTGAACATGCAATTTCACATTCAGTGTGGAATAAGAAGTGTCATAGGTACTGAACACTTCCTGTaGGCCAGGCCTCGTAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KHLNMQFHIQCGIRSVIGTEHFL*ARPRSK Trigger: TTTACTACGAGGCCTGGCTCACAGGAAGTGTTCAGT...ACCTATGACACTTCTTATTCCACACTGAATGTGAAATTGCATGTTCAGATGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR GCA 90 bp | CAAGAACTATTCTCTGACAAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGGAATTACTGTACAGGTaGATATCAACCTCTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: QELFSDKDVKWGSELLYRELLYR*ISTSPC Trigger: GCATGGAGAGGTTGATATGCACCTGTACAGTAATTC...CCTGTACAGTAATTCACTCCCCCATTTCACATCTTTGTCAGAGAATAGTTCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CCA 90 bp | TCACAACTGATTATGATGTCCATGATGACAGCGTGCACTAAGCGCTGTGTCCAAATTTCACATTCAGTGTaGAATAAGAAGTGTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQLIMMSMMTACTKRCVQISHSV*NKKCHR Trigger: CCTATGACACTTCTTATTCCACACTGAATGTGAAAT...TTGGACACAGCGCTTAGTGCACGCTGTCATCATGGACATCATAATCAGTTGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CCA 90 bp | AAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGTGCATATCAACCTCTCCAGACAAAGATGTGAAATaGGGGAGTGAATTACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KDVKWGSELLYRCISTSPDKDVK*GSELLY Trigger: GTACAGTAATTCACTCCCCCATTTCACATCTTTGTC...TGGAGAGGTTGATATGCACCTGTACAGTAATTCACTCCCCCATTTCACATCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR TCA 90 bp | CAAGAACTATTCTCTGACAAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGCTCGTAGTAAACATCTaGACATGCAATTTCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: QELFSDKDVKWGSELLYRLVVNI*TCNFTF Trigger: GAATGTGAAATTGCATGTTCAGATGTTTACTACGAG...CCTGTACAGTAATTCACTCCCCCATTTCACATCTTTGTCAGAGAATAGTTCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR GCA 90 bp | AAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGTGCATATCAACCTCTCCACTAGCTAGGAAGAGGTaGAATCTTTCTAAAAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: KDVKWGSELLYRCISTSPLARKR*NLSKNS Trigger: TGAATTTTTAGAAAGATTGCACCTCTTCCTAGCTAG...TGGAGAGGTTGATATGCACCTGTACAGTAATTCACTCCCCCATTTCACATCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CCA 90 bp | AAACATCTGAACATGCAATTTCACATTCAGTGTGGAATAAGAAGTGTCATAGGTTATGCAATGAGAAACTaGTTTACACAGCTCCGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KHLNMQFHIQCGIRSVIGYAMRN*FTQLRN Trigger: GTTACGGAGCTGTGTAAACCAGTTTCTCATTGCATA...ACCTATGACACTTCTTATTCCACACTGAATGTGAAATTGCATGTTCAGATGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS GCA 90 bp | AGGGTGGGAAGGGGCGGCCGCGGCGGCCCGCAGCGGTTCAGGCGCTaGGCGGCTGCTCTGGCGTCCAGTCCTACCCGCAACCCGCCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RVGRGGRGGPQRFRR*AAALASSPTRNPPR Trigger: TCGCGGCGGGTTGCGGGTAGGACTGGACGCCAGAGCAGCCGCGCAGCGCCTGAACCGCTGCGGGCCGCCGCGGCCGCCCCTTCCCACCCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS GCA 90 bp | AAGGGGCGGCCGCGGCGGCCCGCAGCGGTTCAGGCGCTGCGCGGCTaGTCTGGCGTCCAGTCCTACCCGCAACCCGCCGCGACGTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: KGRPRRPAAVQALRG*SGVQSYPQPAATLL Trigger: CAGTAACGTCGCGGCGGGTTGCGGGTAGGACTGGACGCCAGAGCAGCCGCGCAGCGCCTGAACCGCTGCGGGCCGCCGCGGCCGCCCCTT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS GCA 90 bp | GTCGCCATCTTGCGTCTGGGTCTGGGTCCGGTCGGGTCCGCCGCCTaGAGCAGGGGCGTCGCGTCGTCGTGCAGCGGGCGAGGAGCGACG | + |
|
Preference number: 5 (lower is better) Translates to: VAILRLGLGPVGSAA*SRGVASSCSGRGAT Trigger: CGTCGCTCCTCGCCCGCTGCACGACGACGCGACGCCCCTGCTGCAGGCGGCGGACCCGACCGGACCCAGACCCAGACGCAAGATGGCGAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS GCA 90 bp | GCCGAGCTCGGGGACGCTGAGGCAGTCACGCGGCCGTCGCCATCTTaGGTCTGGGTCTGGGTCCGGTCGGGTCCGCCGCCTGCAGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AELGDAEAVTRPSPS*VWVWVRSGPPPAAG Trigger: CCCTGCTGCAGGCGGCGGACCCGACCGGACCCAGACCCAGACGCAAGATGGCGACGGCCGCGTGACTGCCTCAGCGTCCCCGAGCTCGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 90 bp | CTCGGGGACGCTGAGGCAGTCACGCGGCCGTCGCCATCTTGCGTCTaGGTCTGGGTCCGGTCGGGTCCGCCGCCTGCAGCAGGGGCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LGDAEAVTRPSPSCV*VWVRSGPPPAAGAS Trigger: CGACGCCCCTGCTGCAGGCGGCGGACCCGACCGGACCCAGACCCAGACGCAAGATGGCGACGGCCGCGTGACTGCCTCAGCGTCCCCGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 90 bp | GCGGGCCAGCGGAAAGCGGCTTCTTGGCGGGCGCGGGGACTCCTCTaGGCGGGCGGCGAGGACGGCCGAGGACCAGAAACGAAGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGQRKAASWRARGLL*AGGEDGRGPETKAA Trigger: TGCTGCCTTCGTTTCTGGTCCTCGGCCGTCCTCGCCGCCCGCCCAGAGGAGTCCCCGCGCCCGCCAAGAAGCCGCTTTCCGCTGGCCCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 90 bp | GACGCTGAGGCAGTCACGCGGCCGTCGCCATCTTGCGTCTGGGTCTaGGTCCGGTCGGGTCCGCCGCCTGCAGCAGGGGCGTCGCGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: DAEAVTRPSPSCVWV*VRSGPPPAAGASRR Trigger: ACGACGCGACGCCCCTGCTGCAGGCGGCGGACCCGACCGGACCCAGACCCAGACGCAAGATGGCGACGGCCGCGTGACTGCCTCAGCGTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 90 bp | CTCGCTGCGGCTCCTGGAGAGGATCGGGCGTTCGCGGTCGCAGCCTaGTCTTCCCGCGGGCGAGGAGCGGCCGTTTGGGAGACTAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LAAAPGEDRAFAVAA*SSRGRGAAVWETSQ Trigger: CTGGCTAGTCTCCCAAACGGCCGCTCCTCGCCCGCGGGAAGACCAGGCTGCGACCGCGAACGCCCGATCCTCTCCAGGAGCCGCAGCGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS TCA 90 bp | CCACAGTCAGTCCGTAGGTGCACTCGGAGCCGAGCTCGGGGACGCTaGGGCAGTCACGCGGCCGTCGCCATCTTGCGTCTGGGTCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PQSVRRCTRSRARGR*GSHAAVAILRLGLG Trigger: ACCCAGACCCAGACGCAAGATGGCGACGGCCGCGTGACTGCCTCAGCGTCCCCGAGCTCGGCTCCGAGTGCACCTACGGACTGACTGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS GCA 90 bp | GGGCGAGGAGCGGCCGTTTGGGAGACTAGCCAGAGGGAGAAACTGTaGCGAAGTCGCGGCGGCTGCGGGCCAGCGGAAAGCGGCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GRGAAVWETSQREKL*RSRGGCGPAESGFL Trigger: CAAGAAGCCGCTTTCCGCTGGCCCGCAGCCGCCGCGACTTCGGCACAGTTTCTCCCTCTGGCTAGTCTCCCAAACGGCCGCTCCTCGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 90 bp | CTTGGCTTCCTCCTCACGGATCTGCACCAGCAACTGAAAGAGGTTTaGGGCTGGCCCTTCCCCAGCCCCGGTAAGCCACAGCTGCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LGFLLTDLHQQLKEV*GWPFPSPGKPQLPS Trigger: CGAAGGCAGCTGTGGCTTACCGGGGCTGGGGAAGGGCCAGCCCCAAACCTCTTTCAGTTGCTGGTGCAGATCCGTGAGGAGGAAGCCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 90 bp | TTCCTGGCACTCAGAAGTGCCCTTCCAGGCCTAACTGCAGAAGGGTaGCCTCAGCCTCCTCCTCCTCCTCCTTGGCTTCCTCCTCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: FLALRSALPGLTAEG*PQPPPPPPWLPPHG Trigger: TCCGTGAGGAGGAAGCCAAGGAGGAGGAGGAGGAGGCTGAGGCCACCCTTCTGCAGTTAGGCCTGGAAGGGCACTTCTGAGTGCCAGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS TCA 90 bp | GCCACAGCTGCCTTCGGATGGCCCCGCTGTGGTTGGCCCCGGCAATaGCCTGCTCTAGGCGGGCCTGGTTCACATTATCTTTATCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: ATAAFGWPRCGWPRQ*PALGGPGSHYLYQW Trigger: CCATTGATAAAGATAATGTGAACCAGGCCCGCCTAGAGCAGGTCATTGCCGGGGCCAACCACAGCGGGGCCATCCGAAGGCAGCTGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS GCA 90 bp | AAAGCTGCCTTTCCTGGCACTCAGAAGTGCCCTTCCAGGCCTAACTaGAGAAGGGTGGCCTCAGCCTCCTCCTCCTCCTCCTTGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KAAFPGTQKCPSRPN*RRVASASSSSSLAS Trigger: GGAAGCCAAGGAGGAGGAGGAGGAGGCTGAGGCCACCCTTCTGCAGTTAGGCCTGGAAGGGCACTTCTGAGTGCCAGGAAAGGCAGCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 90 bp | GGCCTAACTGCAGAAGGGTGGCCTCAGCCTCCTCCTCCTCCTCCTTaGCTTCCTCCTCACGGATCTGCACCAGCAACTGAAAGAGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLTAEGWPQPPPPPP*LPPHGSAPATERGL Trigger: CAAACCTCTTTCAGTTGCTGGTGCAGATCCGTGAGGAGGAAGCCAAGGAGGAGGAGGAGGAGGCTGAGGCCACCCTTCTGCAGTTAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CAA 90 bp | ACATCTGTAAGACCCCACAGGGACAAGAAAAGTAGCTGTGATCTAGGTCTGCACGCGGCCGTCGCCATCTaGCGTCTGGGTCTGGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: TSVRPHRDKKSSCDLGLHAAVAI*RLGLGP Trigger: CGGACCCAGACCCAGACGCAAGATGGCGACGGCCGC...GTGCAGACCTAGATCACAGCTACTTTTCTTGTCCCTGTGGGGTCTTACAGATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 90 bp | GCCTCATCACAGTTCACTGGGATGCCCCAGACTAACAGAGCTCTCTaGGAGTTCACATCCATCCCCCGGCACCAGTCTTCCAACAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASSQFTGMPQTNRAL*EFTSIPRHQSSNSV Trigger: GACACTGTTGGAAGACTGGTGCCGGGGGATGGATGTGAACTCCCAGAGAGCTCTGTTAGTCTGGGGCATCCCAGTGAACTGTGATGAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS GCA 90 bp | CCTGGAGGGTCTCTTCGATTTCAGCCTCATCACAGTTCACTGGGATaGCCCAGACTAACAGAGCTCTCTGGGAGTTCACATCCATCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGGSLRFQPHHSSLG*PRLTELSGSSHPSP Trigger: GGGGGATGGATGTGAACTCCCAGAGAGCTCTGTTAGTCTGGGGCATCCCAGTGAACTGTGATGAGGCTGAAATCGAAGAGACCCTCCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 90 bp | ATTAGTGTGCTCCAGCCAGGGATCAAAGGTTTCCTCTCCAGGCCCTaGGATGTCCCTCCCCGAGAAAAGTGTCAGCCTCTTGTACCATAT | + |
|
Preference number: 5 (lower is better) Translates to: ISVLQPGIKGFLSRP*DVPPREKCQPLVPY Trigger: ATATGGTACAAGAGGCTGACACTTTTCTCGGGGAGGGACATCCCAGGGCCTGGAGAGGAAACCTTTGATCCCTGGCTGGAGCACACTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CAA 90 bp | AAACATCTGAACATGCAATTTCACATTCAGTGTGGAATAAGAAGTGTCATAGGTGCGGAAAGCGGCTTCTaGGCGGGCGCGGGGACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KHLNMQFHIQCGIRSVIGAESGF*AGAGTP Trigger: AGGAGTCCCCGCGCCCGCCAAGAAGCCGCTTTCCGC...ACCTATGACACTTCTTATTCCACACTGAATGTGAAATTGCATGTTCAGATGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CAA 90 bp | AAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGTGCATATCAACCTCTCCAGCAACTGAAAGAGGTTaGGGGCTGGCCCTTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KDVKWGSELLYRCISTSPATERG*GLALPQ Trigger: CTGGGGAAGGGCCAGCCCCAAACCTCTTTCAGTTGC...TGGAGAGGTTGATATGCACCTGTACAGTAATTCACTCCCCCATTTCACATCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS-3UTR CAA 90 bp | CAAGAACTATTCTCTGACAAAGATGTGAAATGGGGGAGTGAATTACTGTACAGGAAAAGTGTCAGCCTCTaGTACCATATGGACTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: QELFSDKDVKWGSELLYRKSVSL*YHMDST Trigger: TGTTGAGTCCATATGGTACAAGAGGCTGACACTTTT...CCTGTACAGTAATTCACTCCCCCATTTCACATCTTTGTCAGAGAATAGTTCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS GCA 72 bp | CCGCGGCGGCCCGCAGCGGTTCAGGCGCTGCGCGGCTaGTCTGGCGTCCAGTCCTACCCGCAACCCGCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: PRRPAAVQALRG*SGVQSYPQPAA Trigger: CGCGGCGGGTTGCGGGTAGGACTGGACGCCAGAGCAGCCGCGCAGCGCCTGAACCGCTGCGGGCCGCCGCGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 72 bp | GTCGCGGCGGCTGCGGGCCAGCGGAAAGCGGCTTCTTaGCGGGCGCGGGGACTCCTCTGGGCGGGCGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: VAAAAGQRKAAS*RARGLLWAGGE Trigger: CTCGCCGCCCGCCCAGAGGAGTCCCCGCGCCCGCCAAGAAGCCGCTTTCCGCTGGCCCGCAGCCGCCGCGAC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 72 bp | CGCGGGGCGTGGCCGCCGGGCGCTCGCTGCGGCTCCTaGAGAGGATCGGGCGTTCGCGGTCGCAGCCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RGAWPPGARCGS*RGSGVRGRSLV Trigger: GACCAGGCTGCGACCGCGAACGCCCGATCCTCTCCAGGAGCCGCAGCGAGCGCCCGGCGGCCACGCCCCGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CAA 90 bp | CTGTGCCGAAGTCGCGGCGGCTGCGGGCCAGCGGAAAGCGGCTTCTaGGCGGGCGCGGGGACTCCTCTGGGCGGGCGGCGAGGACGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LCRSRGGCGPAESGF*AGAGTPLGGRRGRP Trigger: CGGCCGTCCTCGCCGCCCGCCCAGAGGAGTCCCCGCGCCCGCCAAGAAGCCGCTTTCCGCTGGCCCGCAGCCGCCGCGACTTCGGCACAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS GCA 72 bp | AGGGGCGGCCGCGGCGGCCCGCAGCGGTTCAGGCGCTaGGCGGCTGCTCTGGCGTCCAGTCCTACCCGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: RGGRGGPQRFRR*AAALASSPTRN Trigger: GTTGCGGGTAGGACTGGACGCCAGAGCAGCCGCGCAGCGCCTGAACCGCTGCGGGCCGCCGCGGCCGCCCCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CAA 72 bp | AGTCGCGGCGGCTGCGGGCCAGCGGAAAGCGGCTTCTaGGCGGGCGCGGGGACTCCTCTGGGCGGGCGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: SRGGCGPAESGF*AGAGTPLGGRR Trigger: TCGCCGCCCGCCCAGAGGAGTCCCCGCGCCCGCCAAGAAGCCGCTTTCCGCTGGCCCGCAGCCGCCGCGACT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS GCA 72 bp | TTGCGTCTGGGTCTGGGTCCGGTCGGGTCCGCCGCCTaGAGCAGGGGCGTCGCGTCGTCGTGCAGCGGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: LRLGLGPVGSAA*SRGVASSCSGR Trigger: TCGCCCGCTGCACGACGACGCGACGCCCCTGCTGCAGGCGGCGGACCCGACCGGACCCAGACCCAGACGCAA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 72 bp | GCGGCCCGCAGCGGTTCAGGCGCTGCGCGGCTGCTCTaGCGTCCAGTCCTACCCGCAACCCGCCGCGACGTT | + |
|
Preference number: 6 (lower is better) Translates to: AARSGSGAARLL*RPVLPATRRDV Trigger: AACGTCGCGGCGGGTTGCGGGTAGGACTGGACGCCAGAGCAGCCGCGCAGCGCCTGAACCGCTGCGGGCCGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 72 bp | GCAGTCACGCGGCCGTCGCCATCTTGCGTCTGGGTCTaGGTCCGGTCGGGTCCGCCGCCTGCAGCAGGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: AVTRPSPSCVWV*VRSGPPPAAGA Trigger: CGCCCCTGCTGCAGGCGGCGGACCCGACCGGACCCAGACCCAGACGCAAGATGGCGACGGCCGCGTGACTGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS GCA 72 bp | GGGGACGCTGAGGCAGTCACGCGGCCGTCGCCATCTTaGGTCTGGGTCTGGGTCCGGTCGGGTCCGCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GDAEAVTRPSPS*VWVWVRSGPPP Trigger: AGGCGGCGGACCCGACCGGACCCAGACCCAGACGCAAGATGGCGACGGCCGCGTGACTGCCTCAGCGTCCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 72 bp | CGGAAAGCGGCTTCTTGGCGGGCGCGGGGACTCCTCTaGGCGGGCGGCGAGGACGGCCGAGGACCAGAAACG | + |
|
Preference number: 6 (lower is better) Translates to: RKAASWRARGLL*AGGEDGRGPET Trigger: CGTTTCTGGTCCTCGGCCGTCCTCGCCGCCCGCCCAGAGGAGTCCCCGCGCCCGCCAAGAAGCCGCTTTCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 72 bp | GCTCCTGGAGAGGATCGGGCGTTCGCGGTCGCAGCCTaGTCTTCCCGCGGGCGAGGAGCGGCCGTTTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: APGEDRAFAVAA*SSRGRGAAVWE Trigger: CTCCCAAACGGCCGCTCCTCGCCCGCGGGAAGACCAGGCTGCGACCGCGAACGCCCGATCCTCTCCAGGAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 72 bp | GCTGAGGCAGTCACGCGGCCGTCGCCATCTTGCGTCTaGGTCTGGGTCCGGTCGGGTCCGCCGCCTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: AEAVTRPSPSCV*VWVRSGPPPAA Trigger: TGCTGCAGGCGGCGGACCCGACCGGACCCAGACCCAGACGCAAGATGGCGACGGCCGCGTGACTGCCTCAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS GCA 72 bp | AGCCAGAGGGAGAAACTGTGCCGAAGTCGCGGCGGCTaGGGGCCAGCGGAAAGCGGCTTCTTGGCGGGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: SQREKLCRSRGG*GPAESGFLAGA Trigger: CGCGCCCGCCAAGAAGCCGCTTTCCGCTGGCCCGCAGCCGCCGCGACTTCGGCACAGTTTCTCCCTCTGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS TCA 72 bp | GTCCGTAGGTGCACTCGGAGCCGAGCTCGGGGACGCTaGGGCAGTCACGCGGCCGTCGCCATCTTGCGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VRRCTRSRARGR*GSHAAVAILRL Trigger: CAGACGCAAGATGGCGACGGCCGCGTGACTGCCTCAGCGTCCCCGAGCTCGGCTCCGAGTGCACCTACGGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 72 bp | CCGGTAAGCCACAGCTGCCTTCGGATGGCCCCGCTGTaGTTGGCCCCGGCAATGACCTGCTCTAGGCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PVSHSCLRMAPL*LAPAMTCSRRA Trigger: GGCCCGCCTAGAGCAGGTCATTGCCGGGGCCAACCACAGCGGGGCCATCCGAAGGCAGCTGTGGCTTACCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CAA 72 bp | GTAAGCCACAGCTGCCTTCGGATGGCCCCGCTGTGGTaGGCCCCGGCAATGACCTGCTCTAGGCGGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VSHSCLRMAPLW*APAMTCSRRAW Trigger: CCAGGCCCGCCTAGAGCAGGTCATTGCCGGGGCCAACCACAGCGGGGCCATCCGAAGGCAGCTGTGGCTTAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS TCA 72 bp | GCTGGCATCTCTGGGCCCGGGGTCGGAGTAGGGTTCTaGAACCCAAGGACACGGGCAACATCTTGCACGGTC | + |
|
Preference number: 6 (lower is better) Translates to: AGISGPGVGVGF*NPRTRATSCTV Trigger: GACCGTGCAAGATGTTGCCCGTGTCCTTGGGTTTCAGAACCCTACTCCGACCCCGGGCCCAGAGATGCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 72 bp | CTCCTCACGGATCTGCACCAGCAACTGAAAGAGGTTTaGGGCTGGCCCTTCCCCAGCCCCGGTAAGCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: LLTDLHQQLKEV*GWPFPSPGKPQ Trigger: CTGTGGCTTACCGGGGCTGGGGAAGGGCCAGCCCCAAACCTCTTTCAGTTGCTGGTGCAGATCCGTGAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 72 bp | CTCAGAAGTGCCCTTCCAGGCCTAACTGCAGAAGGGTaGCCTCAGCCTCCTCCTCCTCCTCCTTGGCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LRSALPGLTAEG*PQPPPPPPWLP Trigger: AGGAAGCCAAGGAGGAGGAGGAGGAGGCTGAGGCCACCCTTCTGCAGTTAGGCCTGGAAGGGCACTTCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 72 bp | CAGTTCACTGGGATGCCCCAGACTAACAGAGCTCTCTaGGAGTTCACATCCATCCCCCGGCACCAGTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: QFTGMPQTNRAL*EFTSIPRHQSS Trigger: GGAAGACTGGTGCCGGGGGATGGATGTGAACTCCCAGAGAGCTCTGTTAGTCTGGGGCATCCCAGTGAACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 72 bp | CTCCAGCCAGGGATCAAAGGTTTCCTCTCCAGGCCCTaGGATGTCCCTCCCCGAGAAAAGTGTCAGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LQPGIKGFLSRP*DVPPREKCQPL Trigger: AAGAGGCTGACACTTTTCTCGGGGAGGGACATCCCAGGGCCTGGAGAGGAAACCTTTGATCCCTGGCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS GCA 72 bp | TCTCTTCGATTTCAGCCTCATCACAGTTCACTGGGATaGCCCAGACTAACAGAGCTCTCTGGGAGTTCACAT | + |
|
Preference number: 6 (lower is better) Translates to: SLRFQPHHSSLG*PRLTELSGSSH Trigger: ATGTGAACTCCCAGAGAGCTCTGTTAGTCTGGGGCATCCCAGTGAACTGTGATGAGGCTGAAATCGAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS CCA 72 bp | TCAACTATCAAGACGCCAAATTCTACCAACAGACTGTaGCTCACCGTGCTCCTGGCCTTAGAACAATACCAG | + |
|
Preference number: 6 (lower is better) Translates to: STIKTPNSTNRL*LTVLLALEQYQ Trigger: CTGGTATTGTTCTAAGGCCAGGAGCACGGTGAGCCACAGTCTGTTGGTAGAATTTGGCGTCTTGATAGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||
| CDS TCA 72 bp | TCTCTACCACCTTCTGTAGCAGAGGCTCCAGACGAATaGCATAAGCAGACAATTTTTCTCCCGGGTTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: SLPPSVAEAPDE*HKQTIFLPGSD Trigger: ATCAGAACCCGGGAGAAAAATTGTCTGCTTATGTCATTCGTCTGGAGCCTCTGCTACAGAAGGTGGTAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316836.5 |
||