Pregenerated sensors for PNLIPRP3 (Homo sapiens)
Ensembl gene IDs: ENSG00000203837Ensembl transcript IDs: ENST00000369230.4
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTAATTCTCCTGTGGCAGGGACTTTGGAGGAAGGGGGCTATACCCTaGGTTGTTGAACTTCAGGTCCCATTGCTAACTGATGAACACATA | + |
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Preference number: 1 (lower is better) Translates to: VILLWQGLWRKGAIP*VVELQVPLLTDEHI Trigger: TATGTGTTCATCAGTTAGCAATGGGACCTGAAGTTCAACAACCCAGGGTATAGCCCCCTTCCTCCAAAGTCCCTGCCACAGGAGAATTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| 3UTR CCA 90 bp | ATGACTAAGTCATTTACAAGGGTCAAATTTGGTCTGGATGCCAGGTaGAAGGAGACACTTTTCTTCATTGCTCCTACTAAAGAAATCCAT | + |
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Preference number: 1 (lower is better) Translates to: MTKSFTRVKFGLDAR*KETLFFIAPTKEIH Trigger: ATGGATTTCTTTAGTAGGAGCAATGAAGAAAAGTGTCTCCTTCCACCTGGCATCCAGACCAAATTTGACCCTTGTAAATGACTTAGTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| 3UTR-3UTR TCA 90 bp | TTCACCATAGAGCATTCAAGACCCAGGGAGAGGAGTAATTCTCCTGTGGCAGGGTATACCCTGGGTTGTTaGACTTCAGGTCCCATTGCT | + |
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Preference number: 2 (lower is better) Translates to: FTIEHSRPRERSNSPVAGYTLGC*TSGPIA Trigger: AGCAATGGGACCTGAAGTTCAACAACCCAGGGTATA...CCCTGCCACAGGAGAATTACTCCTCTCCCTGGGTCTTGAATGCTCTATGGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| 3UTR-3UTR CCA 90 bp | CTTGAGGCTAAATACAAATTCACCATAGAGCATTCAAGACCCAGGGAGAGGAGTGGTCTGGATGCCAGGTaGAAGGAGACACTTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LEAKYKFTIEHSRPRERSGLDAR*KETLFF Trigger: GAAGAAAAGTGTCTCCTTCCACCTGGCATCCAGACC...ACTCCTCTCCCTGGGTCTTGAATGCTCTATGGTGAATTTGTATTTAGCCTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| 3UTR CAA 90 bp | TGGAGGAAGGGGGCTATACCCTGGGTTGTTGAACTTCAGGTCCCATaGCTAACTGATGAACACATAACAGATAAGCTCCAAAATCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: WRKGAIPWVVELQVP*LTDEHITDKLQNLS Trigger: AGAGAGATTTTGGAGCTTATCTGTTATGTGTTCATCAGTTAGCAATGGGACCTGAAGTTCAACAACCCAGGGTATAGCCCCCTTCCTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| 3UTR CCA 72 bp | AGCATTCAAGACCCAGGGAGAGGAGTAATTCTCCTGTaGCAGGGACTTTGGAGGAAGGGGGCTATACCCTGG | + |
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Preference number: 3 (lower is better) Translates to: SIQDPGRGVILL*QGLWRKGAIPW Trigger: CCAGGGTATAGCCCCCTTCCTCCAAAGTCCCTGCCACAGGAGAATTACTCCTCTCCCTGGGTCTTGAATGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| 3UTR CCA 72 bp | CTGTGGCAGGGACTTTGGAGGAAGGGGGCTATACCCTaGGTTGTTGAACTTCAGGTCCCATTGCTAACTGAT | + |
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Preference number: 3 (lower is better) Translates to: LWQGLWRKGAIP*VVELQVPLLTD Trigger: ATCAGTTAGCAATGGGACCTGAAGTTCAACAACCCAGGGTATAGCCCCCTTCCTCCAAAGTCCCTGCCACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| 3UTR-3UTR CAA 90 bp | CTTGAGGCTAAATACAAATTCACCATAGAGCATTCAAGACCCAGGGAGAGGAGTCCTGTGGCAGGGACTTaGGAGGAAGGGGGCTATACC | + |
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Preference number: 3 (lower is better) Translates to: LEAKYKFTIEHSRPRERSPVAGT*EEGGYT Trigger: GGTATAGCCCCCTTCCTCCAAAGTCCCTGCCACAGG...ACTCCTCTCCCTGGGTCTTGAATGCTCTATGGTGAATTTGTATTTAGCCTCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| 3UTR-3UTR CAA 90 bp | TTCACCATAGAGCATTCAAGACCCAGGGAGAGGAGTAATTCTCCTGTGGCAGGGAGACACTTTTCTTCATaGCTCCTACTAAAGAAATCC | + |
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Preference number: 3 (lower is better) Translates to: FTIEHSRPRERSNSPVAGRHFSS*LLLKKS Trigger: GGATTTCTTTAGTAGGAGCAATGAAGAAAAGTGTCT...CCCTGCCACAGGAGAATTACTCCTCTCCCTGGGTCTTGAATGCTCTATGGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| 3UTR-3UTR CAA 90 bp | AATGATATCCAGATTCCTACAGATCATAGTAATTATCTTTTGTCCCAGGGTTCATTACAAGGGTCAAATTaGGTCTGGATGCCAGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: NDIQIPTDHSNYLLSQGSLQGSN*VWMPGG Trigger: TCCACCTGGCATCCAGACCAAATTTGACCCTTGTAA...TGAACCCTGGGACAAAAGATAATTACTATGATCTGTAGGAATCTGGATATCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR TCA 90 bp | CAGGGACTTTGGAGGAAGGGGGCTATACCCTGGGTTGTTGAACTTCAGGTCCCAACCTACCAACTCTGTTaGGAAAGTCCTGGTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: QGLWRKGAIPWVVELQVPTYQLC*ESPGPW Trigger: CCATGGACCAGGACTTTCTCAACAGAGTTGGTAGGT...TGGGACCTGAAGTTCAACAACCCAGGGTATAGCCCCCTTCCTCCAAAGTCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR GCA 90 bp | TTCACCATAGAGCATTCAAGACCCAGGGAGAGGAGTAATTCTCCTGTGGCAGGGCCCAGTTTTCCTAACTaGCCCGCCTACACGAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: FTIEHSRPRERSNSPVAGPSFPN*PAYTKK Trigger: TTTCTTCGTGTAGGCGGGGCAGTTAGGAAAACTGGG...CCCTGCCACAGGAGAATTACTCCTCTCCCTGGGTCTTGAATGCTCTATGGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR CCA 90 bp | CAGGGACTTTGGAGGAAGGGGGCTATACCCTGGGTTGTTGAACTTCAGGTCCCATGTGTAAGTCATGCCTaGCTCAAGTTTTCCACTGAC | + |
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Preference number: 4 (lower is better) Translates to: QGLWRKGAIPWVVELQVPCVSHA*LKFSTD Trigger: GTCAGTGGAAAACTTGAGCCAGGCATGACTTACACA...TGGGACCTGAAGTTCAACAACCCAGGGTATAGCCCCCTTCCTCCAAAGTCCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR TCA 90 bp | ACCCTGAACACCAAGGAACACCTTGGAAATACTAGTGCCATCTCATTAGTTTTTAAGGCCTGGTATCCTTaGCCCAGCTTCCCCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: TLNTKEHLGNTSAISLVFKAWYP*PSFPSQ Trigger: CTGGCTGGGGAAGCTGGGTCAAGGATACCAGGCCTT...AAAAACTAATGAGATGGCACTAGTATTTCCAAGGTGTTCCTTGGTGTTCAGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR CCA 90 bp | CTGGATGCCAGGTGGAAGGAGACACTTTTCTTCATTGCTCCTACTAAAGAAATCCCTCCAACGGGCAAATaGGGAAAGGGACCCTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: LDARWKETLFFIAPTKEIPPTGK*GKGPCV Trigger: AACACAGGGTCCCTTTCCCCATTTGCCCGTTGGAGG...GATTTCTTTAGTAGGAGCAATGAAGAAAAGTGTCTCCTTCCACCTGGCATCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR CCA 90 bp | CCAGGTGGAAGGAGACACTTTTCTTCATTGCTCCTACTAAAGAAATCCATCAAGCTGTGGCAGGGACTTTaGAGGAAGGGGGCTATACCC | + |
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Preference number: 4 (lower is better) Translates to: PGGRRHFSSLLLLKKSIKLWQGL*RKGAIP Trigger: GGGTATAGCCCCCTTCCTCCAAAGTCCCTGCCACAG...CTTGATGGATTTCTTTAGTAGGAGCAATGAAGAAAAGTGTCTCCTTCCACCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR GCA 90 bp | TTCACCATAGAGCATTCAAGACCCAGGGAGAGGAGTAATTCTCCTGTGGCAGGGATTTTGTGTAAGTCATaGCTGGCTCAAGTTTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: FTIEHSRPRERSNSPVAGILCKS*LAQVFH Trigger: GTGGAAAACTTGAGCCAGGCATGACTTACACAAAAT...CCCTGCCACAGGAGAATTACTCCTCTCCCTGGGTCTTGAATGCTCTATGGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR CCA 90 bp | TTCACCATAGAGCATTCAAGACCCAGGGAGAGGAGTAATTCTCCTGTGGCAGGGGGTCCCATAATGTCTTaGCTACAGAAGGTAGATTTA | + |
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Preference number: 4 (lower is better) Translates to: FTIEHSRPRERSNSPVAGGPIMS*LQKVDL Trigger: TAAATCTACCTTCTGTAGCCAAGACATTATGGGACC...CCCTGCCACAGGAGAATTACTCCTCTCCCTGGGTCTTGAATGCTCTATGGTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR CCA 90 bp | GGGTCAAATTTGGTCTGGATGCCAGGTGGAAGGAGACACTTTTCTTCATTGCTCTACAAGGGTCAAATTTaGTCTGGATGCCAGGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: GSNLVWMPGGRRHFSSLLYKGQI*SGCQVE Trigger: TTCCACCTGGCATCCAGACCAAATTTGACCCTTGTA...GAGCAATGAAGAAAAGTGTCTCCTTCCACCTGGCATCCAGACCAAATTTGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR CCA 90 bp | CTTGAGGCTAAATACAAATTCACCATAGAGCATTCAAGACCCAGGGAGAGGAGTGGAGTAATTCTCCTGTaGCAGGGACTTTGGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LEAKYKFTIEHSRPRERSGVILL*QGLWRK Trigger: CTTCCTCCAAAGTCCCTGCCACAGGAGAATTACTCC...ACTCCTCTCCCTGGGTCTTGAATGCTCTATGGTGAATTTGTATTTAGCCTCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR TCA 90 bp | TTCACCATAGAGCATTCAAGACCCAGGGAGAGGAGTAATTCTCCTGTGGCAGGGATGGTAAACCATCTTTaGAACACCCTAACCTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: FTIEHSRPRERSNSPVAGMVNHL*NTLTFH Trigger: ATGAAAGGTTAGGGTGTTTCAAAGATGGTTTACCAT...CCCTGCCACAGGAGAATTACTCCTCTCCCTGGGTCTTGAATGCTCTATGGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR TCA 90 bp | CTTGAGGCTAAATACAAATTCACCATAGAGCATTCAAGACCCAGGGAGAGGAGTAGAAAGACAGTTCCTTaGGTGACTTCGCTTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: LEAKYKFTIEHSRPRERSRKTVP*VTSLPL Trigger: CAGTGGAAGCGAAGTCACTCAAGGAACTGTCTTTCT...ACTCCTCTCCCTGGGTCTTGAATGCTCTATGGTGAATTTGTATTTAGCCTCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| 3UTR CAA 72 bp | GGGGCTATACCCTGGGTTGTTGAACTTCAGGTCCCATaGCTAACTGATGAACACATAACAGATAAGCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: GAIPWVVELQVP*LTDEHITDKLQ Trigger: TTGGAGCTTATCTGTTATGTGTTCATCAGTTAGCAATGGGACCTGAAGTTCAACAACCCAGGGTATAGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR GCA 90 bp | CTTGAGGCTAAATACAAATTCACCATAGAGCATTCAAGACCCAGGGAGAGGAGTTTAACAGACAATTTGTaGCTCCAACGGGCAAATGGG | + |
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Preference number: 4 (lower is better) Translates to: LEAKYKFTIEHSRPRERSLTDNL*LQRANG Trigger: CCCATTTGCCCGTTGGAGGCACAAATTGTCTGTTAA...ACTCCTCTCCCTGGGTCTTGAATGCTCTATGGTGAATTTGTATTTAGCCTCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR CCA 90 bp | CCAGGTGGAAGGAGACACTTTTCTTCATTGCTCCTACTAAAGAAATCCATCAAGGAAAAATGGCCCAGCTaGGTCCAACCCAGTTATTCT | + |
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Preference number: 4 (lower is better) Translates to: PGGRRHFSSLLLLKKSIKEKWPS*VQPSYS Trigger: AGAATAACTGGGTTGGACCCAGCTGGGCCATTTTTC...CTTGATGGATTTCTTTAGTAGGAGCAATGAAGAAAAGTGTCTCCTTCCACCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR CCA 90 bp | TGTCCAGTGAGTTTATACACTCAACATACATTTGCATCACCTCCTCTTATTCAGAGTGTTGTGGAAAAATaGCCCAGCTGGGTCCAACCC | + |
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Preference number: 4 (lower is better) Translates to: CPVSLYTQHTFASPPLIQSVVEK*PSWVQP Trigger: GGGTTGGACCCAGCTGGGCCATTTTTCCACAACACT...CTGAATAAGAGGAGGTGATGCAAATGTATGTTGAGTGTATAAACTCACTGGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR CCA 90 bp | CTGGATGCCAGGTGGAAGGAGACACTTTTCTTCATTGCTCCTACTAAAGAAATCGACCACAAGCATCAATaGTTCCAACACCAAGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: LDARWKETLFFIAPTKEIDHKHQ*FQHQAQ Trigger: TTGAGCTTGGTGTTGGAACCATTGATGCTTGTGGTC...GATTTCTTTAGTAGGAGCAATGAAGAAAAGTGTCTCCTTCCACCTGGCATCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR CCA 90 bp | GGGTCAAATTTGGTCTGGATGCCAGGTGGAAGGAGACACTTTTCTTCATTGCTCAAAATGACCCATTGTTaGGCAACCTTCTTTGGAACA | + |
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Preference number: 4 (lower is better) Translates to: GSNLVWMPGGRRHFSSLLKMTHC*ATFFGT Trigger: TGTTCCAAAGAAGGTTGCCCAACAATGGGTCATTTT...GAGCAATGAAGAAAAGTGTCTCCTTCCACCTGGCATCCAGACCAAATTTGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR TCA 90 bp | AATGATATCCAGATTCCTACAGATCATAGTAATTATCTTTTGTCCCAGGGTTCACCGAGGGGTCTAGCCTaGCTTCCTTTGGAGTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: NDIQIPTDHSNYLLSQGSPRGLA*LPLECC Trigger: ACAACACTCCAAAGGAAGTCAGGCTAGACCCCTCGG...TGAACCCTGGGACAAAAGATAATTACTATGATCTGTAGGAATCTGGATATCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR CCA 90 bp | TGTCCAGTGAGTTTATACACTCAACATACATTTGCATCACCTCCTCTTATTCAGGGTCTGGATGCCAGGTaGAAGGAGACACTTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: CPVSLYTQHTFASPPLIQGLDAR*KETLFF Trigger: GAAGAAAAGTGTCTCCTTCCACCTGGCATCCAGACC...CTGAATAAGAGGAGGTGATGCAAATGTATGTTGAGTGTATAAACTCACTGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR CCA 90 bp | TGTCCAGTGAGTTTATACACTCAACATACATTTGCATCACCTCCTCTTATTCAGAAGGGGGCTATACCCTaGGTTGTTGAACTTCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: CPVSLYTQHTFASPPLIQKGAIP*VVELQV Trigger: GACCTGAAGTTCAACAACCCAGGGTATAGCCCCCTT...CTGAATAAGAGGAGGTGATGCAAATGTATGTTGAGTGTATAAACTCACTGGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| 3UTR CAA 72 bp | GTCTGGATGCCAGGTGGAAGGAGACACTTTTCTTCATaGCTCCTACTAAAGAAATCCATCAAGACTGTATCT | + |
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Preference number: 4 (lower is better) Translates to: VWMPGGRRHFSS*LLLKKSIKTVS Trigger: AGATACAGTCTTGATGGATTTCTTTAGTAGGAGCAATGAAGAAAAGTGTCTCCTTCCACCTGGCATCCAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR TCA 90 bp | TTTTGTCCAGTGAGTTTATACACTCAACATACATTTGCATCACCTCCTCTTATTCTCTTGTGCACACCCTaGACACCAAGGAACACCTTG | + |
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Preference number: 4 (lower is better) Translates to: FCPVSLYTQHTFASPPLILLCTP*TPRNTL Trigger: CAAGGTGTTCCTTGGTGTTCAGGGTGTGCACAAGAG...AATAAGAGGAGGTGATGCAAATGTATGTTGAGTGTATAAACTCACTGGACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR TCA 90 bp | TTTTGTCCAGTGAGTTTATACACTCAACATACATTTGCATCACCTCCTCTTATTGCTCAAGTTTTCCACTaGCAATGGCAAACTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: FCPVSLYTQHTFASPPLIAQVFH*QWQTPQ Trigger: CTGGGGAGTTTGCCATTGTCAGTGGAAAACTTGAGC...AATAAGAGGAGGTGATGCAAATGTATGTTGAGTGTATAAACTCACTGGACAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR TCA 90 bp | CTTGAGGCTAAATACAAATTCACCATAGAGCATTCAAGACCCAGGGAGAGGAGTGCTCTATTTTGTCAATaGTATCCAGATTCCTACAGA | + |
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Preference number: 4 (lower is better) Translates to: LEAKYKFTIEHSRPRERSALFCQ*YPDSYR Trigger: TCTGTAGGAATCTGGATATCATTGACAAAATAGAGC...ACTCCTCTCCCTGGGTCTTGAATGCTCTATGGTGAATTTGTATTTAGCCTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR GCA 90 bp | CCAGGTGGAAGGAGACACTTTTCTTCATTGCTCCTACTAAAGAAATCCATCAAGAAAGAGGATGCGAGCTaGATTTGTATGAATAACGTC | + |
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Preference number: 4 (lower is better) Translates to: PGGRRHFSSLLLLKKSIKKEDAS*ICMNNV Trigger: GACGTTATTCATACAAATGCAGCTCGCATCCTCTTT...CTTGATGGATTTCTTTAGTAGGAGCAATGAAGAAAAGTGTCTCCTTCCACCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR CCA 90 bp | AATGATATCCAGATTCCTACAGATCATAGTAATTATCTTTTGTCCCAGGGTTCATCCTTTGGAGTGTTGTaGAAAAATGGCCCAGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: NDIQIPTDHSNYLLSQGSSFGVL*KNGPAG Trigger: CCCAGCTGGGCCATTTTTCCACAACACTCCAAAGGA...TGAACCCTGGGACAAAAGATAATTACTATGATCTGTAGGAATCTGGATATCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR TCA 90 bp | AATGATATCCAGATTCCTACAGATCATAGTAATTATCTTTTGTCCCAGGGTTCATATACCCTGGGTTGTTaGACTTCAGGTCCCATTGCT | + |
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Preference number: 4 (lower is better) Translates to: NDIQIPTDHSNYLLSQGSYTLGC*TSGPIA Trigger: AGCAATGGGACCTGAAGTTCAACAACCCAGGGTATA...TGAACCCTGGGACAAAAGATAATTACTATGATCTGTAGGAATCTGGATATCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR GCA 90 bp | AGACACTTTTCTTCATTGCTCCTACTAAAGAAATCCATCAAGACTGTATCTGAGGCTGTAGCAACACATTaGACATGTCTCTCTGCCATT | + |
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Preference number: 4 (lower is better) Translates to: RHFSSLLLLKKSIKTVSEAVATH*TCLSAI Trigger: AATGGCAGAGAGACATGTGCAATGTGTTGCTACAGC...CTCAGATACAGTCTTGATGGATTTCTTTAGTAGGAGCAATGAAGAAAAGTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR CCA 90 bp | TGTCCAGTGAGTTTATACACTCAACATACATTTGCATCACCTCCTCTTATTCAGCTGTTGAGAAAGTCCTaGTCCATGGTAAACCATCTT | + |
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Preference number: 4 (lower is better) Translates to: CPVSLYTQHTFASPPLIQLLRKS*SMVNHL Trigger: AAGATGGTTTACCATGGACCAGGACTTTCTCAACAG...CTGAATAAGAGGAGGTGATGCAAATGTATGTTGAGTGTATAAACTCACTGGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR CCA 90 bp | TGTCCAGTGAGTTTATACACTCAACATACATTTGCATCACCTCCTCTTATTCAGAGATTGTTTACAGCATaGATGTATTCCCGTGAACCG | + |
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Preference number: 4 (lower is better) Translates to: CPVSLYTQHTFASPPLIQRLFTA*MYSREP Trigger: CGGTTCACGGGAATACATCCATGCTGTAAACAATCT...CTGAATAAGAGGAGGTGATGCAAATGTATGTTGAGTGTATAAACTCACTGGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR CCA 90 bp | TTTTGTCCAGTGAGTTTATACACTCAACATACATTTGCATCACCTCCTCTTATTTGTGCTCCCAAGCTGTaGCCAATCAAGTGCACTTTA | + |
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Preference number: 4 (lower is better) Translates to: FCPVSLYTQHTFASPPLICAPKL*PIKCTL Trigger: TAAAGTGCACTTGATTGGCCACAGCTTGGGAGCACA...AATAAGAGGAGGTGATGCAAATGTATGTTGAGTGTATAAACTCACTGGACAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR TCA 90 bp | TGTCCAGTGAGTTTATACACTCAACATACATTTGCATCACCTCCTCTTATTCAGCGAGCTGCATTTGTATaGATAACGTCAACAAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: CPVSLYTQHTFASPPLIQRAAFV*ITSTKL Trigger: CAACTTTGTTGACGTTATTCATACAAATGCAGCTCG...CTGAATAAGAGGAGGTGATGCAAATGTATGTTGAGTGTATAAACTCACTGGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR GCA 90 bp | CCAGGTGGAAGGAGACACTTTTCTTCATTGCTCCTACTAAAGAAATCCATCAAGATTTATCACCATTTCTaGTCCCAACTTATTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: PGGRRHFSSLLLLKKSIKIYHHF*SQLILR Trigger: TCTCAGAATAAGTTGGGAGCAGAAATGGTGATAAAT...CTTGATGGATTTCTTTAGTAGGAGCAATGAAGAAAAGTGTCTCCTTCCACCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR GCA 90 bp | ACCCTGAACACCAAGGAACACCTTGGAAATACTAGTGCCATCTCATTAGTTTTTCACTCAACATACATTTaGATCACCTCCTCTTATTCA | + |
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Preference number: 4 (lower is better) Translates to: TLNTKEHLGNTSAISLVFHSTYI*ITSSYS Trigger: TGAATAAGAGGAGGTGATGCAAATGTATGTTGAGTG...AAAAACTAATGAGATGGCACTAGTATTTCCAAGGTGTTCCTTGGTGTTCAGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR CCA 90 bp | CCAGTGAGTTTATACACTCAACATACATTTGCATCACCTCCTCTTATTCAGGAACATGGTTTCAGGTTCTaGAGAATATTAGGTCCCATA | + |
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Preference number: 4 (lower is better) Translates to: PVSLYTQHTFASPPLIQEHGFRF*RILGPI Trigger: TATGGGACCTAATATTCTCCAGAACCTGAAACCATG...TTCCTGAATAAGAGGAGGTGATGCAAATGTATGTTGAGTGTATAAACTCACTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS-3UTR TCA 90 bp | TTTTGTCCAGTGAGTTTATACACTCAACATACATTTGCATCACCTCCTCTTATTAATCTATCAGCAAAATaGCCCATTGTTGGGCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: FCPVSLYTQHTFASPPLINLSAK*PIVGQP Trigger: AGGTTGCCCAACAATGGGTCATTTTGCTGATAGATT...AATAAGAGGAGGTGATGCAAATGTATGTTGAGTGTATAAACTCACTGGACAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR TCA 90 bp | TTTTGTCCAGTGAGTTTATACACTCAACATACATTTGCATCACCTCCTCTTATTCAAGTGCTTTACAAATaGAATGCTGCCTTGAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FCPVSLYTQHTFASPPLIQVLYK*NAALRL Trigger: TAGCCTCAAGGCAGCATTTCATTTGTAAAGCACTTG...AATAAGAGGAGGTGATGCAAATGTATGTTGAGTGTATAAACTCACTGGACAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR GCA 90 bp | TGTCCAGTGAGTTTATACACTCAACATACATTTGCATCACCTCCTCTTATTCAGAAAGGGTTACCCAAGTaGTTTACAAATGAAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CPVSLYTQHTFASPPLIQKGLPK*FTNEML Trigger: CAGCATTTCATTTGTAAAGCACTTGGGTAACCCTTT...CTGAATAAGAGGAGGTGATGCAAATGTATGTTGAGTGTATAAACTCACTGGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CCA 90 bp | AATGATATCCAGATTCCTACAGATCATAGTAATTATCTTTTGTCCCAGGGTTCATATCTGAGATTAGCATaGTTTCAGGTTCTGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NDIQIPTDHSNYLLSQGSYLRLA*FQVLEN Trigger: ATTCTCCAGAACCTGAAACCATGCTAATCTCAGATA...TGAACCCTGGGACAAAAGATAATTACTATGATCTGTAGGAATCTGGATATCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | CAGGGACTTTGGAGGAAGGGGGCTATACCCTGGGTTGTTGAACTTCAGGTCCCAATAACGTCAACAAAGTaGGCATCCGAGGGGTCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: QGLWRKGAIPWVVELQVPITSTK*ASEGSS Trigger: GCTAGACCCCTCGGATGCCAACTTTGTTGACGTTAT...TGGGACCTGAAGTTCAACAACCCAGGGTATAGCCCCCTTCCTCCAAAGTCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS CCA 90 bp | AAGTTGGCATCCGAGGGGTCTAGCCTGACTTCCTTTGGAGTGTTGTaGAAAAATGGCCCAGCTGGGTCCAACCCAGTTATTCTTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KLASEGSSLTSFGVL*KNGPAGSNPVILPR Trigger: CCTTGGAAGAATAACTGGGTTGGACCCAGCTGGGCCATTTTTCCACAACACTCCAAAGGAAGTCAGGCTAGACCCCTCGGATGCCAACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | CAGGGACTTTGGAGGAAGGGGGCTATACCCTGGGTTGTTGAACTTCAGGTCCCAAAAGCAAACCCGTACTaGACTCTGAGTAAGACCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QGLWRKGAIPWVVELQVPKANPY*TLSKTL Trigger: AAGGGTCTTACTCAGAGTCAAGTACGGGTTTGCTTT...TGGGACCTGAAGTTCAACAACCCAGGGTATAGCCCCCTTCCTCCAAAGTCCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | GGGTCAAATTTGGTCTGGATGCCAGGTGGAAGGAGACACTTTTCTTCATTGCTCGGGCTATACCCTGGGTaGTTGAACTTCAGGTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GSNLVWMPGGRRHFSSLLGLYPG*LNFRSH Trigger: ATGGGACCTGAAGTTCAACAACCCAGGGTATAGCCC...GAGCAATGAAGAAAAGTGTCTCCTTCCACCTGGCATCCAGACCAAATTTGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | TTCACCATAGAGCATTCAAGACCCAGGGAGAGGAGTAATTCTCCTGTGGCAGGGGCCAGAGGCTTACTTTaGTCCAGTGAGTTTATACAC | + |
|
Preference number: 5 (lower is better) Translates to: FTIEHSRPRERSNSPVAGARGLL*SSEFIH Trigger: GTGTATAAACTCACTGGACAAAAGTAAGCCTCTGGC...CCCTGCCACAGGAGAATTACTCCTCTCCCTGGGTCTTGAATGCTCTATGGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | TTCACCATAGAGCATTCAAGACCCAGGGAGAGGAGTAATTCTCCTGTGGCAGGGACACCAAGGAACACCTaGGAAATACTAGTGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: FTIEHSRPRERSNSPVAGTPRNT*EILVPS Trigger: AGATGGCACTAGTATTTCCAAGGTGTTCCTTGGTGT...CCCTGCCACAGGAGAATTACTCCTCTCCCTGGGTCTTGAATGCTCTATGGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | ACCCTGAACACCAAGGAACACCTTGGAAATACTAGTGCCATCTCATTAGTTTTTCCTGTGGCAGGGACTTaGGAGGAAGGGGGCTATACC | + |
|
Preference number: 5 (lower is better) Translates to: TLNTKEHLGNTSAISLVFPVAGT*EEGGYT Trigger: GGTATAGCCCCCTTCCTCCAAAGTCCCTGCCACAGG...AAAAACTAATGAGATGGCACTAGTATTTCCAAGGTGTTCCTTGGTGTTCAGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS TCA 90 bp | ATGGTTCCAACACCAAGCTCAAAGAGGATGCGAGCTGCATTTGTATaGATAACGTCAACAAAGTTGGCATCCGAGGGGTCTAGCCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: MVPTPSSKRMRAAFV*ITSTKLASEGSSLT Trigger: AGTCAGGCTAGACCCCTCGGATGCCAACTTTGTTGACGTTATTCATACAAATGCAGCTCGCATCCTCTTTGAGCTTGGTGTTGGAACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | TTCACCATAGAGCATTCAAGACCCAGGGAGAGGAGTAATTCTCCTGTGGCAGGGAGTTTAACAGACAATTaGTGCCTCCAACGGGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: FTIEHSRPRERSNSPVAGSLTDN*CLQRAN Trigger: ATTTGCCCGTTGGAGGCACAAATTGTCTGTTAAACT...CCCTGCCACAGGAGAATTACTCCTCTCCCTGGGTCTTGAATGCTCTATGGTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS GCA 90 bp | ACAAGCATCAATGGTTCCAACACCAAGCTCAAAGAGGATGCGAGCTaGATTTGTATGAATAACGTCAACAAAGTTGGCATCCGAGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TSINGSNTKLKEDAS*ICMNNVNKVGIRGV Trigger: GACCCCTCGGATGCCAACTTTGTTGACGTTATTCATACAAATGCAGCTCGCATCCTCTTTGAGCTTGGTGTTGGAACCATTGATGCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | TTCACCATAGAGCATTCAAGACCCAGGGAGAGGAGTAATTCTCCTGTGGCAGGGCATGGTAAACCATCTTaGAAACACCCTAACCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FTIEHSRPRERSNSPVAGHGKPS*KHPNLS Trigger: TGAAAGGTTAGGGTGTTTCAAAGATGGTTTACCATG...CCCTGCCACAGGAGAATTACTCCTCTCCCTGGGTCTTGAATGCTCTATGGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | CTGGATGCCAGGTGGAAGGAGACACTTTTCTTCATTGCTCCTACTAAAGAAATCAGCTGTAGCAACACATaGCACATGTCTCTCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LDARWKETLFFIAPTKEISCSNT*HMSLCH Trigger: ATGGCAGAGAGACATGTGCAATGTGTTGCTACAGCT...GATTTCTTTAGTAGGAGCAATGAAGAAAAGTGTCTCCTTCCACCTGGCATCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | GGGTCAAATTTGGTCTGGATGCCAGGTGGAAGGAGACACTTTTCTTCATTGCTCCCAACAACACGGAGATaGTTTACAGCATGGATGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GSNLVWMPGGRRHFSSLLPTTRR*FTAWMY Trigger: ATACATCCATGCTGTAAACAATCTCCGTGTTGTTGG...GAGCAATGAAGAAAAGTGTCTCCTTCCACCTGGCATCCAGACCAAATTTGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | CTGGATGCCAGGTGGAAGGAGACACTTTTCTTCATTGCTCCTACTAAAGAAATCACTTCCTTTGGAGTGTaGTGGAAAAATGGCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LDARWKETLFFIAPTKEITSFGV*WKNGPA Trigger: AGCTGGGCCATTTTTCCACAACACTCCAAAGGAAGT...GATTTCTTTAGTAGGAGCAATGAAGAAAAGTGTCTCCTTCCACCTGGCATCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | GGGTCAAATTTGGTCTGGATGCCAGGTGGAAGGAGACACTTTTCTTCATTGCTCCTGCATCGATTAATTTaGTGTAAGTCATGCCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSNLVWMPGGRRHFSSLLLHRLI*CKSCLA Trigger: AGCCAGGCATGACTTACACAAAATTAATCGATGCAG...GAGCAATGAAGAAAAGTGTCTCCTTCCACCTGGCATCCAGACCAAATTTGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | GGGTCAAATTTGGTCTGGATGCCAGGTGGAAGGAGACACTTTTCTTCATTGCTCAGGTCCCATAATGTCTaGGCTACAGAAGGTAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: GSNLVWMPGGRRHFSSLLRSHNV*ATEGRF Trigger: AAATCTACCTTCTGTAGCCAAGACATTATGGGACCT...GAGCAATGAAGAAAAGTGTCTCCTTCCACCTGGCATCCAGACCAAATTTGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | CTGGATGCCAGGTGGAAGGAGACACTTTTCTTCATTGCTCCTACTAAAGAAATCTTACAAGGGTCAAATTaGGTCTGGATGCCAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LDARWKETLFFIAPTKEILQGSN*VWMPGG Trigger: TCCACCTGGCATCCAGACCAAATTTGACCCTTGTAA...GATTTCTTTAGTAGGAGCAATGAAGAAAAGTGTCTCCTTCCACCTGGCATCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | ACCCTGAACACCAAGGAACACCTTGGAAATACTAGTGCCATCTCATTAGTTTTTAACCTACCAACTCTGTaGAGAAAGTCCTGGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: TLNTKEHLGNTSAISLVFNLPTL*RKSWSM Trigger: CATGGACCAGGACTTTCTCAACAGAGTTGGTAGGTT...AAAAACTAATGAGATGGCACTAGTATTTCCAAGGTGTTCCTTGGTGTTCAGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | GGGTCAAATTTGGTCTGGATGCCAGGTGGAAGGAGACACTTTTCTTCATTGCTCTATTCCCGTGAACCGTaGATCCAATCTAAATTAATG | + |
|
Preference number: 5 (lower is better) Translates to: GSNLVWMPGGRRHFSSLLYSREP*IQSKLM Trigger: CATTAATTTAGATTGGATCAACGGTTCACGGGAATA...GAGCAATGAAGAAAAGTGTCTCCTTCCACCTGGCATCCAGACCAAATTTGACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | TGTCCAGTGAGTTTATACACTCAACATACATTTGCATCACCTCCTCTTATTCAGCTATACCCTGGGTTGTaGAACTTCAGGTCCCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: CPVSLYTQHTFASPPLIQLYPGL*NFRSHC Trigger: GCAATGGGACCTGAAGTTCAACAACCCAGGGTATAG...CTGAATAAGAGGAGGTGATGCAAATGTATGTTGAGTGTATAAACTCACTGGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | CTGGATGCCAGGTGGAAGGAGACACTTTTCTTCATTGCTCCTACTAAAGAAATCTTGATACGGGTGATCTaGTCTGTTCCAAAATATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LDARWKETLFFIAPTKEILIRVI*SVPKYE Trigger: CTCATATTTTGGAACAGACAAGATCACCCGTATCAA...GATTTCTTTAGTAGGAGCAATGAAGAAAAGTGTCTCCTTCCACCTGGCATCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS TCA 90 bp | CTACCAACTCTGTTGAGAAAGTCCTGGTCCATGGTAAACCATCTTTaGAACACCCTAACCTTTCATAGCAAACTTCTTTTCCTCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LPTLLRKSWSMVNHL*NTLTFHSKLLFLLM Trigger: CATCAAGAGGAAAAGAAGTTTGCTATGAAAGGTTAGGGTGTTTCAAAGATGGTTTACCATGGACCAGGACTTTCTCAACAGAGTTGGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | AGACACTTTTCTTCATTGCTCCTACTAAAGAAATCCATCAAGACTGTATCTGAGCAGCAAAATGACCCATaGTTGGGCAACCTTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RHFSSLLLLKKSIKTVSEQQNDP*LGNLLW Trigger: CCAAAGAAGGTTGCCCAACAATGGGTCATTTTGCTG...CTCAGATACAGTCTTGATGGATTTCTTTAGTAGGAGCAATGAAGAAAAGTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | CTGGATGCCAGGTGGAAGGAGACACTTTTCTTCATTGCTCCTACTAAAGAAATCAGACACTTTTCTTCATaGCTCCTACTAAAGAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: LDARWKETLFFIAPTKEIRHFSS*LLLKKS Trigger: GGATTTCTTTAGTAGGAGCAATGAAGAAAAGTGTCT...GATTTCTTTAGTAGGAGCAATGAAGAAAAGTGTCTCCTTCCACCTGGCATCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | TGTCCAGTGAGTTTATACACTCAACATACATTTGCATCACCTCCTCTTATTCAGGCTTTCAGCATAAAATaGATAACTTCGGGCATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: CPVSLYTQHTFASPPLIQAFSIK*ITSGMV Trigger: AACCATGCCCGAAGTTATCAATTTTATGCTGAAAGC...CTGAATAAGAGGAGGTGATGCAAATGTATGTTGAGTGTATAAACTCACTGGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | TTTTGTCCAGTGAGTTTATACACTCAACATACATTTGCATCACCTCCTCTTATTCAAAATGACCCATTGTaGGGCAACCTTCTTTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: FCPVSLYTQHTFASPPLIQNDPL*GNLLWN Trigger: GTTCCAAAGAAGGTTGCCCAACAATGGGTCATTTTG...AATAAGAGGAGGTGATGCAAATGTATGTTGAGTGTATAAACTCACTGGACAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | AATGATATCCAGATTCCTACAGATCATAGTAATTATCTTTTGTCCCAGGGTTCAAAGAAAGACAGTTCCTaGAGTGACTTCGCTTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: NDIQIPTDHSNYLLSQGSKKDSS*SDFAST Trigger: AGTGGAAGCGAAGTCACTCAAGGAACTGTCTTTCTT...TGAACCCTGGGACAAAAGATAATTACTATGATCTGTAGGAATCTGGATATCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | CCAGTGAGTTTATACACTCAACATACATTTGCATCACCTCCTCTTATTCAGGAACATAGTAATTATCTTTaGTCCCAGGGTTCAGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PVSLYTQHTFASPPLIQEHSNYL*SQGSVC Trigger: ACACACTGAACCCTGGGACAAAAGATAATTACTATG...TTCCTGAATAAGAGGAGGTGATGCAAATGTATGTTGAGTGTATAAACTCACTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS-3UTR CAA 90 bp | TTTTGTCCAGTGAGTTTATACACTCAACATACATTTGCATCACCTCCTCTTATTGAACTTCAGGTCCCATaGCTAACTGATGAACACATA | + |
|
Preference number: 5 (lower is better) Translates to: FCPVSLYTQHTFASPPLIELQVP*LTDEHI Trigger: TATGTGTTCATCAGTTAGCAATGGGACCTGAAGTTC...AATAAGAGGAGGTGATGCAAATGTATGTTGAGTGTATAAACTCACTGGACAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS CAA 72 bp | GCATCCGAGGGGTCTAGCCTGACTTCCTTTGGAGTGTaGTGGAAAAATGGCCCAGCTGGGTCCAACCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: ASEGSSLTSFGV*WKNGPAGSNPV Trigger: AACTGGGTTGGACCCAGCTGGGCCATTTTTCCACAACACTCCAAAGGAAGTCAGGCTAGACCCCTCGGATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS CCA 72 bp | GACCCAGCTTCCCCAGCCAGGTGTGCTCCCAAGCTGTaGCCAATCAAGTGCACTTTAGAAGGGGAATATTCA | + |
|
Preference number: 6 (lower is better) Translates to: DPASPARCAPKL*PIKCTLEGEYS Trigger: TGAATATTCCCCTTCTAAAGTGCACTTGATTGGCCACAGCTTGGGAGCACACCTGGCTGGGGAAGCTGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS CCA 72 bp | TCCGAGGGGTCTAGCCTGACTTCCTTTGGAGTGTTGTaGAAAAATGGCCCAGCTGGGTCCAACCCAGTTATT | + |
|
Preference number: 6 (lower is better) Translates to: SEGSSLTSFGVL*KNGPAGSNPVI Trigger: AATAACTGGGTTGGACCCAGCTGGGCCATTTTTCCACAACACTCCAAAGGAAGTCAGGCTAGACCCCTCGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS CAA 90 bp | ACAAAGTTGGCATCCGAGGGGTCTAGCCTGACTTCCTTTGGAGTGTaGTGGAAAAATGGCCCAGCTGGGTCCAACCCAGTTATTCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: TKLASEGSSLTSFGV*WKNGPAGSNPVILP Trigger: TGGAAGAATAACTGGGTTGGACCCAGCTGGGCCATTTTTCCACAACACTCCAAAGGAAGTCAGGCTAGACCCCTCGGATGCCAACTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS GCA 72 bp | TCCACTGACAATGGCAAACTCCCCAGTTTTCCTAACTaGCCCGCCTACACGAAGAAAGACAGTTCCTTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: STDNGKLPSFPN*PAYTKKDSSLS Trigger: ACTCAAGGAACTGTCTTTCTTCGTGTAGGCGGGGCAGTTAGGAAAACTGGGGAGTTTGCCATTGTCAGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS TCA 72 bp | ACACCAAGCTCAAAGAGGATGCGAGCTGCATTTGTATaGATAACGTCAACAAAGTTGGCATCCGAGGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: TPSSKRMRAAFV*ITSTKLASEGS Trigger: AGACCCCTCGGATGCCAACTTTGTTGACGTTATTCATACAAATGCAGCTCGCATCCTCTTTGAGCTTGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS CCA 72 bp | ACCTCAGCACCAACAACACGGAGATTGTTTACAGCATaGATGTATTCCCGTGAACCGTTGATCCAATCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: TSAPTTRRLFTA*MYSREPLIQSK Trigger: TTTAGATTGGATCAACGGTTCACGGGAATACATCCATGCTGTAAACAATCTCCGTGTTGTTGGTGCTGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS GCA 72 bp | AATGGTTCCAACACCAAGCTCAAAGAGGATGCGAGCTaGATTTGTATGAATAACGTCAACAAAGTTGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: NGSNTKLKEDAS*ICMNNVNKVGI Trigger: GATGCCAACTTTGTTGACGTTATTCATACAAATGCAGCTCGCATCCTCTTTGAGCTTGGTGTTGGAACCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS CAA 90 bp | TCAAATTTGGTCTGGATGCCAGGTGGAAGGAGACACTTTTCTTCATaGCTCCTACTAAAGAAATCCATCAAGACTGTATCTGAGATTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SNLVWMPGGRRHFSS*LLLKKSIKTVSEIS Trigger: GCTAATCTCAGATACAGTCTTGATGGATTTCTTTAGTAGGAGCAATGAAGAAAAGTGTCTCCTTCCACCTGGCATCCAGACCAAATTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS TCA 72 bp | CTGTTGAGAAAGTCCTGGTCCATGGTAAACCATCTTTaGAACACCCTAACCTTTCATAGCAAACTTCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLRKSWSMVNHL*NTLTFHSKLLF Trigger: GAAAAGAAGTTTGCTATGAAAGGTTAGGGTGTTTCAAAGATGGTTTACCATGGACCAGGACTTTCTCAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS CCA 72 bp | TTTGAAGTGAAATCTATCAGCAAAATGACCCATTGTTaGGCAACCTTCTTTGGAACAAAAGAAGCAATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: FEVKSISKMTHC*ATFFGTKEAIS Trigger: GGAAATTGCTTCTTTTGTTCCAAAGAAGGTTGCCCAACAATGGGTCATTTTGCTGATAGATTTCACTTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS CCA 72 bp | TTCAGGTTCTGGAGAATATTAGGTCCCATAATGTCTTaGCTACAGAAGGTAGATTTATATCCATATTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: FRFWRILGPIMS*LQKVDLYPYFP Trigger: TGGGAAATATGGATATAAATCTACCTTCTGTAGCCAAGACATTATGGGACCTAATATTCTCCAGAACCTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS CAA 72 bp | TTTCAGGTTCTGGAGAATATTAGGTCCCATAATGTCTaGGCTACAGAAGGTAGATTTATATCCATATTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FQVLENIRSHNV*ATEGRFISIFP Trigger: GGGAAATATGGATATAAATCTACCTTCTGTAGCCAAGACATTATGGGACCTAATATTCTCCAGAACCTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000369230.4 |
||
| CDS CAA 90 bp | ATAAGCAATAAATGCATCAGGATTAAGAATGCTTTCAGCATAAAATaGATAACTTCGGGCATGGTTACAGTCAAAGAAGGAAGCCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: ISNKCIRIKNAFSIK*ITSGMVTVKEGSHF Trigger: GAAATGGCTTCCTTCTTTGACTGTAACCATGCCCGAAGTTATCAATTTTATGCTGAAAGCATTCTTAATCCTGATGCATTTATTGCTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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| CDS CAA 72 bp | AAATGCATCAGGATTAAGAATGCTTTCAGCATAAAATaGATAACTTCGGGCATGGTTACAGTCAAAGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: KCIRIKNAFSIK*ITSGMVTVKEG Trigger: TCCTTCTTTGACTGTAACCATGCCCGAAGTTATCAATTTTATGCTGAAAGCATTCTTAATCCTGATGCATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000369230.4 |
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