RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PNKP (Homo sapiens)

Ensembl gene IDs: ENSG00000039650

Ensembl transcript IDs: ENST00000322344.8, ENST00000593706.3, ENST00000593946.5, ENST00000594661.5, ENST00000595081.5, ENST00000595792.1, ENST00000596014.5, ENST00000596624.1, ENST00000596726.3, ENST00000597965.2, ENST00000598020.3, ENST00000599454.5, ENST00000599543.3, ENST00000600573.5, ENST00000600910.5, ENST00000601816.3, ENST00000625216.2, ENST00000625299.1, ENST00000626274.2, ENST00000627232.2, ENST00000629088.1, ENST00000629179.1, ENST00000631020.2, ENST00000636214.1, ENST00000637897.1, ENST00000638016.1, ENST00000640501.1

Found 566 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTCTCGAAACCGGTTGTTGTGGCGCGCCTGCTCCAGAGTGGCGGTaGAGAGGAAGCAGCGGCAGGGGACGCCCGCGGCTCGGGCACACT +
Preference number: 1 (lower is better)
Translates to: SLETGCCGAPAPEWR*RGSSGRGRPRLGHT
Trigger: AGTGTGCCCGAGCCGCGGGCGTCCCCTGCCGCTGCTTCCTCTTCACCGCCACTCTGGAGCAGGCGCGCCACAACAACCGGTTTCGAGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
3UTR CCA 90 bp TGGCCGGGCGTCCGGCTGCGTCTCCCACAAAGATGCTGTCCCCGATaGATATGGGCGTGCCGTCGTTGGCCTGCTCCTGCAGATGGTCCC +
Preference number: 1 (lower is better)
Translates to: WPGVRLRLPQRCCPR*IWACRRWPAPADGP
Trigger: GGGACCATCTGCAGGAGCAGGCCAACGACGGCACGCCCATATCCATCGGGGACAGCATCTTTGTGGGAGACGCAGCCGGACGCCCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR GCA 90 bp ATATGGGCGTGCCGTCGTTGGCCTGCTCCTGCAGATGGTCCCACATaGCCGTCACCGGCTTCCGGTACAAGCCTGCGTGCGTGGCCACCA +
Preference number: 1 (lower is better)
Translates to: IWACRRWPAPADGPT*PSPASGTSLRAWPP
Trigger: TGGTGGCCACGCACGCAGGCTTGTACCGGAAGCCGGTGACGGGCATGTGGGACCATCTGCAGGAGCAGGCCAACGACGGCACGCCCATAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR CCA 90 bp TTGGGACACCAGAGGGGTGCCAGGCGGAGTATCTGGCTGGGATTCTaGTGTGCGGGTCTCTTCCCAGCGCAGGGTCAGTGGGTGGAGGCC +
Preference number: 1 (lower is better)
Translates to: LGHQRGARRSIWLGF*CAGLFPAQGQWVEA
Trigger: GGCCTCCACCCACTGACCCTGCGCTGGGAAGAGACCCGCACACCAGAATCCCAGCCAGATACTCCGCCTGGCACCCCTCTGGTGTCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
3UTR CCA 90 bp GCCCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATaGCAGAGAAGCCTTCAGCCAGCGTTGGGGCCTCGAACTGCTTCC +
Preference number: 1 (lower is better)
Translates to: APASAPPIAGTGSPG*QRSLQPALGPRTAS
Trigger: GGAAGCAGTTCGAGGCCCCAACGCTGGCTGAAGGCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000593946.5
ENST00000597965.2
ENST00000625216.2
ENST00000627232.2
3UTR TCA 90 bp GTGTGCGGGTCTCTTCCCAGCGCAGGGTCAGTGGGTGGAGGCCATTaGCCAAATACAGTGTGTCCCCCACCCCCAGAGAGCCCTCCAACC +
Preference number: 1 (lower is better)
Translates to: VCGSLPSAGSVGGGH*PNTVCPPPPESPPT
Trigger: GGTTGGAGGGCTCTCTGGGGGTGGGGGACACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCGCTGGGAAGAGACCCGCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
3UTR GCA 90 bp GCGGGAGACAGTCCTCGGATCAAAGGCTGGGAGCTCGAAGCCGGCTaGTGGCCACTTGAGAAAGAACTCCTCAGGCGTGGCGAAGGGCAG +
Preference number: 1 (lower is better)
Translates to: AGDSPRIKGWELEAG*WPLEKELLRRGEGQ
Trigger: CTGCCCTTCGCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGAGGACTGTCTCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR CCA 90 bp GGAGACAGTCCTCGGATCAAAGGCTGGGAGCTCGAAGCCGGCTGCTaGCCACTTGAGAAAGAACTCCTCAGGCGTGGCGAAGGGCAGGCC +
Preference number: 1 (lower is better)
Translates to: GDSPRIKGWELEAGC*PLEKELLRRGEGQA
Trigger: GGCCTGCCCTTCGCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGAGGACTGTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR CCA 90 bp GGACGTACCTGGCGCGGCTCGCGGCGTCTGGGTTTGTGTTGTCGATaGCGACCCGTTTCCCTTGCTTCAGGGCTGTCTCACACGTGGTCA +
Preference number: 1 (lower is better)
Translates to: GRTWRGSRRLGLCCR*RPVSLASGLSHTWS
Trigger: TGACCACGTGTGAGACAGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTACGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
3UTR GCA 90 bp CTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTaGTTCAGGGCTGTCTCACACGTGGTCACACAGCGCTGCCAGGAG +
Preference number: 1 (lower is better)
Translates to: LAASGFVLSMATRFP*FRAVSHVVTQRCQE
Trigger: CTCCTGGCAGCGCTGTGTGACCACGTGTGAGACAGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
3UTR CCA 90 bp TGGCTGGGATTCTGGTGTGCGGGTCTCTTCCCAGCGCAGGGTCAGTaGGTGGAGGCCATTGACCAAATACAGTGTGTCCCCCACCCCCAG +
Preference number: 1 (lower is better)
Translates to: WLGFWCAGLFPAQGQ*VEAIDQIQCVPHPQ
Trigger: CTGGGGGTGGGGGACACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCGCTGGGAAGAGACCCGCACACCAGAATCCCAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
3UTR CCA 90 bp TTCTCATCTTGGGACACCAGAGGGGTGCCAGGCGGAGTATCTGGCTaGGATTCTGGTGTGCGGGTCTCTTCCCAGCGCAGGGTCAGTGGG +
Preference number: 1 (lower is better)
Translates to: FSSWDTRGVPGGVSG*DSGVRVSSQRRVSG
Trigger: CCCACTGACCCTGCGCTGGGAAGAGACCCGCACACCAGAATCCCAGCCAGATACTCCGCCTGGCACCCCTCTGGTGTCCCAAGATGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
3UTR CCA 90 bp CCGGAACGGGATCTCCAGGATGGCAGAGAAGCCTTCAGCCAGCGTTaGGGCCTCGAACTGCTTCCTGGCAGTGGTGGGAACAGTGAGGGA +
Preference number: 1 (lower is better)
Translates to: PERDLQDGREAFSQR*GLELLPGSGGNSEG
Trigger: TCCCTCACTGTTCCCACCACTGCCAGGAAGCAGTTCGAGGCCCCAACGCTGGCTGAAGGCTTCTCTGCCATCCTGGAGATCCCGTTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597965.2
3UTR CCA 90 bp TGGGATTCTGGTGTGCGGGTCTCTTCCCAGCGCAGGGTCAGTGGGTaGAGGCCATTGACCAAATACAGTGTGTCCCCCACCCCCAGAGAG +
Preference number: 1 (lower is better)
Translates to: WDSGVRVSSQRRVSG*RPLTKYSVSPTPRE
Trigger: CTCTCTGGGGGTGGGGGACACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCGCTGGGAAGAGACCCGCACACCAGAATCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
3UTR CCA 90 bp TCTCTTCTCATCTTGGGACACCAGAGGGGTGCCAGGCGGAGTATCTaGCTGGGATTCTGGTGTGCGGGTCTCTTCCCAGCGCAGGGTCAG +
Preference number: 1 (lower is better)
Translates to: SLLILGHQRGARRSI*LGFWCAGLFPAQGQ
Trigger: CTGACCCTGCGCTGGGAAGAGACCCGCACACCAGAATCCCAGCCAGATACTCCGCCTGGCACCCCTCTGGTGTCCCAAGATGAGAAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
3UTR CCA 90 bp CAGCTTCTCCACCACAGCCTCCACCTTGGCCTTGAACTCCTCGGCTaGCAGCTTCCCGCGCCCGATGCTCATCTGGTTGGTGAAGATCAC +
Preference number: 1 (lower is better)
Translates to: QLLHHSLHLGLELLG*QLPAPDAHLVGEDH
Trigger: GTGATCTTCACCAACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGAGTTCAAGGCCAAGGTGGAGGCTGTGGTGGAGAAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000627232.2
ENST00000636214.1
3UTR CCA 90 bp TGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGCTGTCTCACACGTaGTCACACAGCGCTGCCAGGAGCCTAGCGTGTCCCTGTTCACGT +
Preference number: 1 (lower is better)
Translates to: CRWRPVSLASGLSHT*SHSAARSLACPCSR
Trigger: ACGTGAACAGGGACACGCTAGGCTCCTGGCAGCGCTGTGTGACCACGTGTGAGACAGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR GCA 90 bp CCTAGCGTGTCCCTGTTCACGTGGACATATCCGGCCGACACGAGGTaGTTCTTGAGAAAGGTGGACTTCCCGGCCCCAGGGAATCCCACT +
Preference number: 1 (lower is better)
Translates to: PSVSLFTWTYPADTR*FLRKVDFPAPGNPT
Trigger: AGTGGGATTCCCTGGGGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGGATATGTCCACGTGAACAGGGACACGCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR TCA 90 bp TGTCCCTGTTCACGTGGACATATCCGGCCGACACGAGGTGCTTCTTaGGAAAGGTGGACTTCCCGGCCCCAGGGAATCCCACTGCGACAA +
Preference number: 1 (lower is better)
Translates to: CPCSRGHIRPTRGAS*ERWTSRPQGIPLRQ
Trigger: TTGTCGCAGTGGGATTCCCTGGGGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGGATATGTCCACGTGAACAGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR-3UTR GCA 90 bp AGCAGCGGCAGGGGACGCCCGCGGCTCGGGCACACTGGACGTACCTGGCGCGGCTCCCAGCTGTTTCACTaGCACTGTCCGGGTCTCAGG +
Preference number: 2 (lower is better)
Translates to: SSGRGRPRLGHTGRTWRGSQLFH*HCPGLR
Trigger: CCTGAGACCCGGACAGTGGCAGTGAAACAGCTGGGA...GCCGCGCCAGGTACGTCCAGTGTGCCCGAGCCGCGGGCGTCCCCTGCCGCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
3UTR-3UTR CCA 90 bp AGCAGCGGCAGGGGACGCCCGCGGCTCGGGCACACTGGACGTACCTGGCGCGGCATCTGGCTGGGATTCTaGTGTGCGGGTCTCTTCCCA +
Preference number: 2 (lower is better)
Translates to: SSGRGRPRLGHTGRTWRGIWLGF*CAGLFP
Trigger: TGGGAAGAGACCCGCACACCAGAATCCCAGCCAGAT...GCCGCGCCAGGTACGTCCAGTGTGCCCGAGCCGCGGGCGTCCCCTGCCGCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
3UTR-3UTR CCA 90 bp TTCCCGGCCCCAGGGAATCCCACTGCGACAACCACCTCCGGGCTGGCGCTCAGGCCAGCCACCTTGCCCTaGGGTTTCACCCCAGCTGCG +
Preference number: 2 (lower is better)
Translates to: FPAPGNPTATTTSGLALRPATLP*GFTPAA
Trigger: CGCAGCTGGGGTGAAACCCCAGGGCAAGGTGGCTGG...CCTGAGCGCCAGCCCGGAGGTGGTTGTCGCAGTGGGATTCCCTGGGGCCGGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593946.5
3UTR-3UTR CCA 90 bp AGAGTGGCGGTGAAGAGGAAGCAGCGGCAGGGGACGCCCGCGGCTCGGGCACACACAAGCCTGCGTGCGTaGCCACCAGCACCTGGAAGG +
Preference number: 2 (lower is better)
Translates to: RVAVKRKQRQGTPAARAHTSLRA*PPAPGR
Trigger: CCTTCCAGGTGCTGGTGGCCACGCACGCAGGCTTGT...GTGTGCCCGAGCCGCGGGCGTCCCCTGCCGCTGCTTCCTCTTCACCGCCACTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR-3UTR CCA 90 bp CACTGCGACAACCACCTCCGGGCTGGCGCTCAGGAGGGCCCTGGACTCGGGGAGCCAGCGCAGGGTCAGTaGGTGGAGGCCATTGACCAA +
Preference number: 2 (lower is better)
Translates to: HCDNHLRAGAQEGPGLGEPAQGQ*VEAIDQ
Trigger: TTGGTCAATGGCCTCCACCCACTGACCCTGCGCTGG...CTCCCCGAGTCCAGGGCCCTCCTGAGCGCCAGCCCGGAGGTGGTTGTCGCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
3UTR-3UTR CCA 90 bp AGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGAAACAGCGTTTATTGTaGAGGGGAGCTGGGCGGGGC +
Preference number: 2 (lower is better)
Translates to: SWAGLSPRRTGSTAAPASKQRLL*RGAGRG
Trigger: GCCCCGCCCAGCTCCCCTCCACAATAAACGCTGTTT...CGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
3UTR-3UTR CCA 90 bp CGTCGTTGGCCTGCTCCTGCAGATGGTCCCACATGCCCGTCACCGGCTTCCGGTACAAGCCTGCGTGCGTaGCCACCAGCACCTGGAAGG +
Preference number: 2 (lower is better)
Translates to: RRWPAPADGPTCPSPASGTSLRA*PPAPGR
Trigger: CCTTCCAGGTGCTGGTGGCCACGCACGCAGGCTTGT...ACCGGAAGCCGGTGACGGGCATGTGGGACCATCTGCAGGAGCAGGCCAACGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR CAA 90 bp CTCGGGCACACTGGACGTACCTGGCGCGGCTCGCGGCGTCTGGGTTaGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGCTGTCT +
Preference number: 2 (lower is better)
Translates to: LGHTGRTWRGSRRLG*CCRWRPVSLASGLS
Trigger: AGACAGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTACGTCCAGTGTGCCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
3UTR-3UTR TCA 90 bp AAAGGTGGACTTCCCGGCCCCAGGGAATCCCACTGCGACAACCACCTCCGGGCTAGGGCAGGCCAAGGTTaGGGGCAAACAGGCGATCGG +
Preference number: 2 (lower is better)
Translates to: KGGLPGPRESHCDNHLRARAGQG*GQTGDR
Trigger: CCGATCGCCTGTTTGCCCTCAACCTTGGCCTGCCCT...AGCCCGGAGGTGGTTGTCGCAGTGGGATTCCCTGGGGCCGGGAAGTCCACCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR-3UTR GCA 90 bp GCCCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAGTTGGGGCCTCGAACTaGTTCCTGGCAGTGGTGGGA +
Preference number: 2 (lower is better)
Translates to: APASAPPIAGTGSPGWQRVGASN*FLAVVG
Trigger: TCCCACCACTGCCAGGAAGCAGTTCGAGGCCCCAAC...TCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597965.2
3UTR-3UTR CCA 90 bp GAGCGGGAGACAGTCCTCGGATCAAAGGCTGGGAGCTCGAAGCCGGCTGCTGGCGCCAGGCGGAGTATCTaGCTGGGATTCTGGTGTGCG +
Preference number: 2 (lower is better)
Translates to: ERETVLGSKAGSSKPAAGARRSI*LGFWCA
Trigger: CGCACACCAGAATCCCAGCCAGATACTCCGCCTGGC...GCCAGCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGAGGACTGTCTCCCGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593946.5
3UTR-3UTR CCA 90 bp CGGCTGCGTCTCCCACAAAGATGCTGTCCCCGATGGATATGGGCGTGCCGTCGTGTGGCCACCAGCACCTaGAAGGGGACCCCCAGCTTC +
Preference number: 2 (lower is better)
Translates to: RLRLPQRCCPRWIWACRRVATST*KGTPSF
Trigger: GAAGCTGGGGGTCCCCTTCCAGGTGCTGGTGGCCAC...ACGACGGCACGCCCATATCCATCGGGGACAGCATCTTTGTGGGAGACGCAGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR CAA 90 bp GGTGTGCGGGTCTCTTCCCAGCGCAGGGTCAGTGGGTGGAGGCCATaGACCAAATACAGTGTGTCCCCCACCCCCAGAGAGCCCTCCAAC +
Preference number: 2 (lower is better)
Translates to: GVRVSSQRRVSGWRP*TKYSVSPTPREPSN
Trigger: GTTGGAGGGCTCTCTGGGGGTGGGGGACACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCGCTGGGAAGAGACCCGCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
3UTR CAA 90 bp GCACACTGGACGTACCTGGCGCGGCTCGCGGCGTCTGGGTTTGTGTaGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGCTGTCTCACAC +
Preference number: 2 (lower is better)
Translates to: AHWTYLARLAASGFV*SMATRFPCFRAVSH
Trigger: GTGTGAGACAGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTACGTCCAGTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
3UTR-3UTR TCA 90 bp GCCCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGACAGTGGTGGGAACAGTaGGGGACAGCCTGGATCATG +
Preference number: 2 (lower is better)
Translates to: APASAPPIAGTGSPGWQRQWWEQ*GTAWIM
Trigger: CATGATCCAGGCTGTCCCTCACTGTTCCCACCACTG...TCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597965.2
3UTR-3UTR GCA 90 bp AAAGGTGGACTTCCCGGCCCCAGGGAATCCCACTGCGACAACCACCTCCGGGCTTCGTTGGCCTGCTCCTaGAGATGGTCCCACATGCCC +
Preference number: 2 (lower is better)
Translates to: KGGLPGPRESHCDNHLRASLACS*RWSHMP
Trigger: GGGCATGTGGGACCATCTGCAGGAGCAGGCCAACGA...AGCCCGGAGGTGGTTGTCGCAGTGGGATTCCCTGGGGCCGGGAAGTCCACCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR-3UTR CCA 90 bp TCAGGCGTGGCGAAGGGCAGGCCAAGGTTGAGGGCAAACAGGCGATCGGCGCAGAAACAGCGTTTATTGTaGAGGGGAGCTGGGCGGGGC +
Preference number: 2 (lower is better)
Translates to: SGVAKGRPRLRANRRSAQKQRLL*RGAGRG
Trigger: GCCCCGCCCAGCTCCCCTCCACAATAAACGCTGTTT...CTGCGCCGATCGCCTGTTTGCCCTCAACCTTGGCCTGCCCTTCGCCACGCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR-3UTR CCA 90 bp CCGGCTGCTGGCCACTTGAGAAAGAACTCCTCAGGCGTGGCGAAGGGCAGGCCAGGCGGAGTATCTGGCTaGGATTCTGGTGTGCGGGTC +
Preference number: 2 (lower is better)
Translates to: PAAGHLRKNSSGVAKGRPGGVSG*DSGVRV
Trigger: GACCCGCACACCAGAATCCCAGCCAGATACTCCGCC...TGGCCTGCCCTTCGCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593946.5
3UTR-3UTR CCA 90 bp GTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGCTGTCTCCAACCACCTCCGGGCTaGCGCTCAGGAGGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: VWVCVVDGDPFPLLQGCLQPPPG*RSGGPW
Trigger: CCAGGGCCCTCCTGAGCGCCAGCCCGGAGGTGGTTG...GAGACAGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR CAA 90 bp GTCCTCGGATCAAAGGCTGGGAGCTCGAAGCCGGCTGCTGGCCACTaGAGAAAGAACTCCTCAGGCGTGGCGAAGGGCAGGCCAAGGTTG +
Preference number: 2 (lower is better)
Translates to: VLGSKAGSSKPAAGH*RKNSSGVAKGRPRL
Trigger: CAACCTTGGCCTGCCCTTCGCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR CAA 90 bp GCTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTaGCTTCAGGGCTGTCTCACACGTGGTCACACAGCGCTGCCAGGA +
Preference number: 2 (lower is better)
Translates to: ARGVWVCVVDGDPFP*LQGCLTRGHTALPG
Trigger: TCCTGGCAGCGCTGTGTGACCACGTGTGAGACAGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
3UTR-3UTR TCA 90 bp GCGCAGGGTCAGTGGGTGGAGGCCATTGACCAAATACAGTGTGTCCCCCACCCCCTGGGTCCCGGTAGTTaGGGGGTTAACTCCCAGCTG +
Preference number: 2 (lower is better)
Translates to: AQGQWVEAIDQIQCVPHPLGPGS*GVNSQL
Trigger: CAGCTGGGAGTTAACCCCTCAACTACCGGGACCCAG...GGGGTGGGGGACACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
3UTR-3UTR CCA 90 bp TTGAGAAAGGTGGACTTCCCGGCCCCAGGGAATCCCACTGCGACAACCACCTCCGCCTGCTCCTGCAGATaGTCCCACATGCCCGTCACC +
Preference number: 2 (lower is better)
Translates to: LRKVDFPAPGNPTATTTSACSCR*SHMPVT
Trigger: GGTGACGGGCATGTGGGACCATCTGCAGGAGCAGGC...GGAGGTGGTTGTCGCAGTGGGATTCCCTGGGGCCGGGAAGTCCACCTTTCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR-3UTR TCA 90 bp CAGCGCAGGGTCAGTGGGTGGAGGCCATTGACCAAATACAGTGTGTCCCCCACCCTGGGTCCCGGTAGTTaGGGGGTTAACTCCCAGCTG +
Preference number: 2 (lower is better)
Translates to: QRRVSGWRPLTKYSVSPTLGPGS*GVNSQL
Trigger: CAGCTGGGAGTTAACCCCTCAACTACCGGGACCCAG...GGTGGGGGACACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
3UTR-3UTR GCA 90 bp GAGAAAGAACTCCTCAGGCGTGGCGAAGGGCAGGCCAAGGTTGAGGGCAAACAGGCAGATGGTCCCACATaGCCGTCACCGGCTTCCGGT +
Preference number: 2 (lower is better)
Translates to: EKELLRRGEGQAKVEGKQADGPT*PSPASG
Trigger: ACCGGAAGCCGGTGACGGGCATGTGGGACCATCTGC...CTGTTTGCCCTCAACCTTGGCCTGCCCTTCGCCACGCCTGAGGAGTTCTTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR CAA 90 bp GTGTCCCTGTTCACGTGGACATATCCGGCCGACACGAGGTGCTTCTaGAGAAAGGTGGACTTCCCGGCCCCAGGGAATCCCACTGCGACA +
Preference number: 2 (lower is better)
Translates to: VSLFTWTYPADTRCF*RKVDFPAPGNPTAT
Trigger: TGTCGCAGTGGGATTCCCTGGGGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGGATATGTCCACGTGAACAGGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR-3UTR GCA 90 bp CCAGCGCAGGGTCAGTGGGTGGAGGCCATTGACCAAATACAGTGTGTCCCCCACTCCCAGCTGTTTCACTaGCACTGTCCGGGTCTCAGG +
Preference number: 2 (lower is better)
Translates to: PAQGQWVEAIDQIQCVPHSQLFH*HCPGLR
Trigger: CCTGAGACCCGGACAGTGGCAGTGAAACAGCTGGGA...GTGGGGGACACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
3UTR-3UTR CCA 90 bp AGATGCTGTCCCCGATGGATATGGGCGTGCCGTCGTTGGCCTGCTCCTGCAGATAAACAGCGTTTATTGTaGAGGGGAGCTGGGCGGGGC +
Preference number: 2 (lower is better)
Translates to: RCCPRWIWACRRWPAPADKQRLL*RGAGRG
Trigger: GCCCCGCCCAGCTCCCCTCCACAATAAACGCTGTTT...ATCTGCAGGAGCAGGCCAACGACGGCACGCCCATATCCATCGGGGACAGCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR-3UTR CCA 90 bp CCGGCCGACACGAGGTGCTTCTTGAGAAAGGTGGACTTCCCGGCCCCAGGGAATAGATCCTCCAGTCACTaGGGCCAGTGGGAAAGACCT +
Preference number: 2 (lower is better)
Translates to: PADTRCFLRKVDFPAPGNRSSSH*GQWERP
Trigger: AGGTCTTTCCCACTGGCCCCAGTGACTGGAGGATCT...ATTCCCTGGGGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
3UTR-3UTR GCA 90 bp TTGAGAAAGGTGGACTTCCCGGCCCCAGGGAATCCCACTGCGACAACCACCTCCCGTCTCCCACAAAGATaGTGTCCCCGATGGATATGG +
Preference number: 2 (lower is better)
Translates to: LRKVDFPAPGNPTATTTSRLPQR*CPRWIW
Trigger: CCATATCCATCGGGGACAGCATCTTTGTGGGAGACG...GGAGGTGGTTGTCGCAGTGGGATTCCCTGGGGCCGGGAAGTCCACCTTTCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR-3UTR GCA 90 bp TGGTCACACAGCGCTGCCAGGAGCCTAGCGTGTCCCTGTTCACGTGGACATATCGAGCTCGAAGCCGGCTaGTGGCCACTTGAGAAAGAA +
Preference number: 2 (lower is better)
Translates to: WSHSAARSLACPCSRGHIELEAG*WPLEKE
Trigger: TTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTC...GATATGTCCACGTGAACAGGGACACGCTAGGCTCCTGGCAGCGCTGTGTGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR-3UTR CCA 90 bp TCTCGAAACCGGTTGTTGTGGCGCGCCTGCTCCAGAGTGGCGGTGAAGAGGAAGAGCTCCACTGAGGATTaGAGGGGTGGAGTCAGGATT +
Preference number: 2 (lower is better)
Translates to: SRNRLLWRACSRVAVKRKSSTED*RGGVRI
Trigger: AATCCTGACTCCACCCCTCCAATCCTCAGTGGAGCT...CTTCCTCTTCACCGCCACTCTGGAGCAGGCGCGCCACAACAACCGGTTTCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
3UTR-3UTR CCA 90 bp CTCCAGTCACTGGGGCCAGTGGGAAAGACCTTCCCAGAGCGTGTGGTGATGAGCGCATCCTTGTGTGATTaGGTCCCTCATTTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: LQSLGPVGKTFPERVVMSASLCD*VPHFWG
Trigger: TCCCCAGAAATGAGGGACCCAATCACACAAGGATGC...GCTCATCACCACACGCTCTGGGAAGGTCTTTCCCACTGGCCCCAGTGACTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593946.5
3UTR-3UTR TCA 90 bp GGTGAAGATCACCAGCTTGTAGCCCTCGGCTTCCAGCTCTCGGAGCTTACGGGGATTTGCATCCTTGTGTaGTTGGGTCCCTCATTTCTG +
Preference number: 2 (lower is better)
Translates to: GEDHQLVALGFQLSELTGICILV*LGPSFL
Trigger: CAGAAATGAGGGACCCAATCACACAAGGATGCAAAT...CCCCGTAAGCTCCGAGAGCTGGAAGCCGAGGGCTACAAGCTGGTGATCTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
3UTR-3UTR CCA 90 bp GGTCTCTTCCCAGCGCAGGGTCAGTGGGTGGAGGCCATTGACCAAATACAGTGTGCATCCTTGTGTGATTaGGTCCCTCATTTCTGGGGA +
Preference number: 2 (lower is better)
Translates to: GLFPAQGQWVEAIDQIQCASLCD*VPHFWG
Trigger: TCCCCAGAAATGAGGGACCCAATCACACAAGGATGC...ACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCGCTGGGAAGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
3UTR-3UTR TCA 90 bp AACTCCCAGCTGTTTCACTGCCACTGTCCGGGTCTCAGGATCTGCGACCAGCTCATTTGCATCCTTGTGTaGTTGGGTCCCTCATTTCTG +
Preference number: 2 (lower is better)
Translates to: NSQLFHCHCPGLRICDQLICILV*LGPSFL
Trigger: CAGAAATGAGGGACCCAATCACACAAGGATGCAAAT...GAGCTGGTCGCAGATCCTGAGACCCGGACAGTGGCAGTGAAACAGCTGGGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
3UTR GCA 72 bp GTCCCACATGCCCGTCACCGGCTTCCGGTACAAGCCTaGGTGCGTGGCCACCAGCACCTGGAAGGGGACCCC +
Preference number: 3 (lower is better)
Translates to: VPHARHRLPVQA*VRGHQHLEGDP
Trigger: GGGGTCCCCTTCCAGGTGCTGGTGGCCACGCACGCAGGCTTGTACCGGAAGCCGGTGACGGGCATGTGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR-3UTR CAA 90 bp GGAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTGAGAAACAGCGTTTATaGTGGAGGGGAGCTGGGCGG +
Preference number: 3 (lower is better)
Translates to: GAGRGSALGELAVQPPQPEKQRL*WRGAGR
Trigger: CCGCCCAGCTCCCCTCCACAATAAACGCTGTTTCTC...AGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
3UTR-3UTR CAA 90 bp GGGGCCCAGTTGGCCGGGCGTCCGGCTGCGTCTCCCACAAAGATGCTGTCCCCGGAGAAACAGCGTTTATaGTGGAGGGGAGCTGGGCGG +
Preference number: 3 (lower is better)
Translates to: GAQLAGRPAASPTKMLSPEKQRL*WRGAGR
Trigger: CCGCCCAGCTCCCCTCCACAATAAACGCTGTTTCTC...CGGGGACAGCATCTTTGTGGGAGACGCAGCCGGACGCCCGGCCAACTGGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR GCA 72 bp TGCCGTCGTTGGCCTGCTCCTGCAGATGGTCCCACATaGCCGTCACCGGCTTCCGGTACAAGCCTGCGTGCG +
Preference number: 3 (lower is better)
Translates to: CRRWPAPADGPT*PSPASGTSLRA
Trigger: CGCACGCAGGCTTGTACCGGAAGCCGGTGACGGGCATGTGGGACCATCTGCAGGAGCAGGCCAACGACGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR CCA 72 bp CAGAGGGGTGCCAGGCGGAGTATCTGGCTGGGATTCTaGTGTGCGGGTCTCTTCCCAGCGCAGGGTCAGTGG +
Preference number: 3 (lower is better)
Translates to: QRGARRSIWLGF*CAGLFPAQGQW
Trigger: CCACTGACCCTGCGCTGGGAAGAGACCCGCACACCAGAATCCCAGCCAGATACTCCGCCTGGCACCCCTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
3UTR CCA 72 bp TGGGACACCAGAGGGGTGCCAGGCGGAGTATCTGGCTaGGATTCTGGTGTGCGGGTCTCTTCCCAGCGCAGG +
Preference number: 3 (lower is better)
Translates to: WDTRGVPGGVSG*DSGVRVSSQRR
Trigger: CCTGCGCTGGGAAGAGACCCGCACACCAGAATCCCAGCCAGATACTCCGCCTGGCACCCCTCTGGTGTCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
3UTR CCA 72 bp AGGAGAAGTCTTTCTTCTTCCGCCCCGGGGCCCAGTTaGCCGGGCGTCCGGCTGCGTCTCCCACAAAGATGC +
Preference number: 3 (lower is better)
Translates to: RRSLSSSAPGPS*PGVRLRLPQRC
Trigger: GCATCTTTGTGGGAGACGCAGCCGGACGCCCGGCCAACTGGGCCCCGGGGCGGAAGAAGAAAGACTTCTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR CCA 72 bp GGCACACTGGACGTACCTGGCGCGGCTCGCGGCGTCTaGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTG +
Preference number: 3 (lower is better)
Translates to: GTLDVPGAARGV*VCVVDGDPFPL
Trigger: CAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTACGTCCAGTGTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
3UTR-3UTR CAA 90 bp CGTCGTTGGCCTGCTCCTGCAGATGGTCCCACATGCCCGTCACCGGCTTCCGGTACCACAGCCTCCACCTaGGCCTTGAACTCCTCGGCT +
Preference number: 3 (lower is better)
Translates to: RRWPAPADGPTCPSPASGTTAST*ALNSSA
Trigger: AGCCGAGGAGTTCAAGGCCAAGGTGGAGGCTGTGGT...ACCGGAAGCCGGTGACGGGCATGTGGGACCATCTGCAGGAGCAGGCCAACGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR TCA 72 bp CAAAGGCTGGGAGCTCGAAGCCGGCTGCTGGCCACTTaGGAAAGAACTCCTCAGGCGTGGCGAAGGGCAGGC +
Preference number: 3 (lower is better)
Translates to: QRLGARSRLLAT*ERTPQAWRRAG
Trigger: GCCTGCCCTTCGCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTCCCAGCCTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR CCA 72 bp GTCCGGCTGCGTCTCCCACAAAGATGCTGTCCCCGATaGATATGGGCGTGCCGTCGTTGGCCTGCTCCTGCA +
Preference number: 3 (lower is better)
Translates to: VRLRLPQRCCPR*IWACRRWPAPA
Trigger: TGCAGGAGCAGGCCAACGACGGCACGCCCATATCCATCGGGGACAGCATCTTTGTGGGAGACGCAGCCGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR CCA 72 bp TGGCGCGGCTCGCGGCGTCTGGGTTTGTGTTGTCGATaGCGACCCGTTTCCCTTGCTTCAGGGCTGTCTCAC +
Preference number: 3 (lower is better)
Translates to: WRGSRRLGLCCR*RPVSLASGLSH
Trigger: GTGAGACAGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
3UTR CCA 72 bp TCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATaGCAGAGAAGCCTTCAGCCAGCGTTGGGGCCTCGA +
Preference number: 3 (lower is better)
Translates to: SAPPIAGTGSPG*QRSLQPALGPR
Trigger: TCGAGGCCCCAACGCTGGCTGAAGGCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593946.5
ENST00000597965.2
ENST00000625216.2
ENST00000627232.2
3UTR CCA 72 bp GGTGTGCGGGTCTCTTCCCAGCGCAGGGTCAGTGGGTaGAGGCCATTGACCAAATACAGTGTGTCCCCCACC +
Preference number: 3 (lower is better)
Translates to: GVRVSSQRRVSG*RPLTKYSVSPT
Trigger: GGTGGGGGACACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCGCTGGGAAGAGACCCGCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
3UTR CCA 72 bp ATCTTGGGACACCAGAGGGGTGCCAGGCGGAGTATCTaGCTGGGATTCTGGTGTGCGGGTCTCTTCCCAGCG +
Preference number: 3 (lower is better)
Translates to: ILGHQRGARRSI*LGFWCAGLFPA
Trigger: CGCTGGGAAGAGACCCGCACACCAGAATCCCAGCCAGATACTCCGCCTGGCACCCCTCTGGTGTCCCAAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
3UTR-3UTR CAA 90 bp TGCCGTCGTTGGCCTGCTCCTGCAGATGGTCCCACATGCCCGTCACCGGCTTCCAGTGGGTGGAGGCCATaGACCAAATACAGTGTGTCC +
Preference number: 3 (lower is better)
Translates to: CRRWPAPADGPTCPSPASSGWRP*TKYSVS
Trigger: GGACACACTGTATTTGGTCAATGGCCTCCACCCACT...GGAAGCCGGTGACGGGCATGTGGGACCATCTGCAGGAGCAGGCCAACGACGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593946.5
3UTR-3UTR CAA 90 bp TCTCGAAACCGGTTGTTGTGGCGCGCCTGCTCCAGAGTGGCGGTGAAGAGGAAGGGCGACCCGTTTCCCTaGCTTCAGGGCTGTCTCACA +
Preference number: 3 (lower is better)
Translates to: SRNRLLWRACSRVAVKRKGDPFP*LQGCLT
Trigger: TGTGAGACAGCCCTGAAGCAAGGGAAACGGGTCGCC...CTTCCTCTTCACCGCCACTCTGGAGCAGGCGCGCCACAACAACCGGTTTCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
3UTR TCA 72 bp TCTCTTCCCAGCGCAGGGTCAGTGGGTGGAGGCCATTaGCCAAATACAGTGTGTCCCCCACCCCCAGAGAGC +
Preference number: 3 (lower is better)
Translates to: SLPSAGSVGGGH*PNTVCPPPPES
Trigger: GCTCTCTGGGGGTGGGGGACACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCGCTGGGAAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
3UTR TCA 72 bp CTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTGGTaGAGATCACCAGCTTGTAGCCCTCGGCTTCCAGCT +
Preference number: 3 (lower is better)
Translates to: LAASRARCSSGW*RSPACSPRLPA
Trigger: AGCTGGAAGCCGAGGGCTACAAGCTGGTGATCTTCACCAACCAGATGAGCATCGGGCGCGGGAAGCTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000627232.2
ENST00000636214.1
3UTR GCA 72 bp CTCCCACAAAGATGCTGTCCCCGATGGATATGGGCGTaGCGTCGTTGGCCTGCTCCTGCAGATGGTCCCACA +
Preference number: 3 (lower is better)
Translates to: LPQRCCPRWIWA*RRWPAPADGPT
Trigger: TGTGGGACCATCTGCAGGAGCAGGCCAACGACGGCACGCCCATATCCATCGGGGACAGCATCTTTGTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR GCA 72 bp AGTCCTCGGATCAAAGGCTGGGAGCTCGAAGCCGGCTaGTGGCCACTTGAGAAAGAACTCCTCAGGCGTGGC +
Preference number: 3 (lower is better)
Translates to: SPRIKGWELEAG*WPLEKELLRRG
Trigger: GCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGAGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR GCA 72 bp TCCCTGTTCACGTGGACATATCCGGCCGACACGAGGTaGTTCTTGAGAAAGGTGGACTTCCCGGCCCCAGGG +
Preference number: 3 (lower is better)
Translates to: SLFTWTYPADTR*FLRKVDFPAPG
Trigger: CCCTGGGGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGGATATGTCCACGTGAACAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR CCA 72 bp CTCGGCTTCCAGCTCTCGGAGCTTACGGGGAATCTCTaGGTACAAGATCCTCCAGTCACTGGGGCCAGTGGG +
Preference number: 3 (lower is better)
Translates to: LGFQLSELTGNL*VQDPPVTGASG
Trigger: CCCACTGGCCCCAGTGACTGGAGGATCTTGTACCCAGAGATTCCCCGTAAGCTCCGAGAGCTGGAAGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000636214.1
3UTR CCA 72 bp CTGCGTCTCCCACAAAGATGCTGTCCCCGATGGATATaGGCGTGCCGTCGTTGGCCTGCTCCTGCAGATGGT +
Preference number: 3 (lower is better)
Translates to: LRLPQRCCPRWI*ACRRWPAPADG
Trigger: ACCATCTGCAGGAGCAGGCCAACGACGGCACGCCCATATCCATCGGGGACAGCATCTTTGTGGGAGACGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR CCA 72 bp CCTCGGATCAAAGGCTGGGAGCTCGAAGCCGGCTGCTaGCCACTTGAGAAAGAACTCCTCAGGCGTGGCGAA +
Preference number: 3 (lower is better)
Translates to: PRIKGWELEAGC*PLEKELLRRGE
Trigger: TTCGCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR CCA 72 bp GATCTCCAGGATGGCAGAGAAGCCTTCAGCCAGCGTTaGGGCCTCGAACTGCTTCCTGGCAGTGGTGGGAAC +
Preference number: 3 (lower is better)
Translates to: DLQDGREAFSQR*GLELLPGSGGN
Trigger: GTTCCCACCACTGCCAGGAAGCAGTTCGAGGCCCCAACGCTGGCTGAAGGCTTCTCTGCCATCCTGGAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597965.2
3UTR-3UTR CAA 90 bp GTGCGGGTCTCTTCCCAGCGCAGGGTCAGTGGGTGGAGGCCATTGACCAAATACGAGAAACAGCGTTTATaGTGGAGGGGAGCTGGGCGG +
Preference number: 3 (lower is better)
Translates to: VRVSSQRRVSGWRPLTKYEKQRL*WRGAGR
Trigger: CCGCCCAGCTCCCCTCCACAATAAACGCTGTTTCTC...GTATTTGGTCAATGGCCTCCACCCACTGACCCTGCGCTGGGAAGAGACCCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
3UTR-3UTR CAA 90 bp CCGGCTGCTGGCCACTTGAGAAAGAACTCCTCAGGCGTGGCGAAGGGCAGGCCAGGGTGGAGTCAGGATTaGCATCCTTGTGTGATTGGG +
Preference number: 3 (lower is better)
Translates to: PAAGHLRKNSSGVAKGRPGWSQD*HPCVIG
Trigger: CCCAATCACACAAGGATGCAAATCCTGACTCCACCC...TGGCCTGCCCTTCGCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593946.5
3UTR TCA 72 bp TCACGTGGACATATCCGGCCGACACGAGGTGCTTCTTaGGAAAGGTGGACTTCCCGGCCCCAGGGAATCCCA +
Preference number: 3 (lower is better)
Translates to: SRGHIRPTRGAS*ERWTSRPQGIP
Trigger: TGGGATTCCCTGGGGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGGATATGTCCACGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR TCA 72 bp CTCCAACCCCGGCTTCAACTCCTGGGTCCCGGTAGTTaGGGGGTTAACTCCCAGCTGTTTCACTGCCACTGT +
Preference number: 3 (lower is better)
Translates to: LQPRLQLLGPGS*GVNSQLFHCHC
Trigger: ACAGTGGCAGTGAAACAGCTGGGAGTTAACCCCTCAACTACCGGGACCCAGGAGTTGAAGCCGGGGTTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
3UTR CCA 72 bp GATCTCCAGGATGGCAGAGAAGCCTTCAGCCAGCGTTaGGGCCTCGAACTGCTTCCTGTAGCCATACATGAC +
Preference number: 3 (lower is better)
Translates to: DLQDGREAFSQR*GLELLPVAIHD
Trigger: GTCATGTATGGCTACAGGAAGCAGTTCGAGGCCCCAACGCTGGCTGAAGGCTTCTCTGCCATCCTGGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
3UTR TCA 72 bp GATTGGAGGGGTGGAGTCAGGATTTGCATCCTTGTGTaGTTGGGTCCCTCATTTCTGGGGAGTGTGGCCTGC +
Preference number: 3 (lower is better)
Translates to: DWRGGVRICILV*LGPSFLGSVAC
Trigger: GCAGGCCACACTCCCCAGAAATGAGGGACCCAATCACACAAGGATGCAAATCCTGACTCCACCCCTCCAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
3UTR-3UTR CAA 90 bp AACCCCGGCTTCAACTCCTGGGTCCCGGTAGTTGAGGGGTTAACTCCCAGCTGTTCAGGATTTGCATCCTaGTGTGATTGGGTCCCTCAT +
Preference number: 3 (lower is better)
Translates to: NPGFNSWVPVVEGLTPSCSGFAS*CDWVPH
Trigger: ATGAGGGACCCAATCACACAAGGATGCAAATCCTGA...ACAGCTGGGAGTTAACCCCTCAACTACCGGGACCCAGGAGTTGAAGCCGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
3UTR TCA 72 bp CTCGAACTGCTTCCTGTAGCCATACATGACCATGTCTaGCACGGGGATATGAGAGGAGTCCGTCATCTCTCG +
Preference number: 3 (lower is better)
Translates to: LELLPVAIHDHV*HGDMRGVRHLS
Trigger: CGAGAGATGACGGACTCCTCTCATATCCCCGTGTCAGACATGGTCATGTATGGCTACAGGAAGCAGTTCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR GCA 90 bp GGGAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCAGGTCCTGCCCGAGGTaGCCCGCCTGCAACCCGGCC +
Preference number: 4 (lower is better)
Translates to: GSWAGLSPRRTGSTAAPARSCPR*PACNPA
Trigger: GGCCGGGTTGCAGGCGGGGCACCTCGGGCAGGACCT...GGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600910.5
CDS-3UTR GCA 90 bp TGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGCTCGACCAGGGAGGTCCTaGCCGAGGTGCCCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: WAGLSPRRTGSTAAPASARPGRS*PRCPAC
Trigger: GCAGGCGGGGCACCTCGGGCAGGACCTCCCTGGTCG...AGCCGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600910.5
CDS-3UTR GCA 90 bp GCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGGGGTCAGGGGTCCCCTaGCCAGGACCAGGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: AGRGSALGELAVQPPQPRGSGVP*PGPGLA
Trigger: GGCAAGCCCTGGTCCTGGGCAGGGGACCCCTGACCC...CCGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp AGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGCCGAGGGCAGGAAGATaGGGGGCGCTCCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SWAGLSPRRTGSTAAPASPRAGR*GALPQG
Trigger: CCCCTGGGGGAGCGCCCCCCATCTTCCTGCCCTCGG...CGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp CTCCAGAGTGGCGGTGAAGAGGAAGCAGCGGCAGGGGACGCCCGCGGCTCGGGCGCGGCTCGGGCACACTaGACGTACCTGGCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: LQSGGEEEAAAGDARGSGAARAH*TYLARL
Trigger: GAGCCGCGCCAGGTACGTCCAGTGTGCCCGAGCCGC...GCCCGAGCCGCGGGCGTCCCCTGCCGCTGCTTCCTCTTCACCGCCACTCTGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CCA 90 bp GTGGCGGTGAAGAGGAAGCAGCGGCAGGGGACGCCCGCGGCTCGGGCACACTGGCCACCTCGCCCATCCTaGGTGCCGGCCTGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: VAVKRKQRQGTPAARAHWPPRPS*VPAWGA
Trigger: TGCTCCCCAGGCCGGCACCCAGGATGGGCGAGGTGG...CCAGTGTGCCCGAGCCGCGGGCGTCCCCTGCCGCTGCTTCCTCTTCACCGCCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR CCA 90 bp TGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGCTCCCGGGACCGCGGCTTaGGCTCACGGCCACTTCCGA +
Preference number: 4 (lower is better)
Translates to: WAGLSPRRTGSTAAPASAPGTAA*AHGHFR
Trigger: TCGGAAGTGGCCGTGAGCCCAAGCCGCGGTCCCGGG...AGCCGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600910.5
CDS-3UTR TCA 90 bp AGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGAGGCAGAGAGGCCCTaGGCGGGAGACAGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: SWAGLSPRRTGSTAAPASEAERP*AGDSPR
Trigger: CCGAGGACTGTCTCCCGCTCAGGGCCTCTCTGCCTC...CGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR GCA 90 bp TGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGCTCCCAGGACCAGGGCTTaGCCGTCCGAGGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: WAGLSPRRTGSTAAPASAPRTRA*PSEGRK
Trigger: CTTCCTGCCCTCGGACGGGCAAGCCCTGGTCCTGGG...AGCCGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp TTCCCGGCCCCAGGGAATCCCACTGCGACAACCACCTCCGGGCTGGCGCTCAGGGCGGCTCGGGCACACTaGACGTACCTGGCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: FPAPGNPTATTTSGLALRAARAH*TYLARL
Trigger: GAGCCGCGCCAGGTACGTCCAGTGTGCCCGAGCCGC...CCTGAGCGCCAGCCCGGAGGTGGTTGTCGCAGTGGGATTCCCTGGGGCCGGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp TGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGCTATTGTGGAGGGGAGCTaGGCGGGGCTCAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: WAGLSPRRTGSTAAPASAIVEGS*AGLSPR
Trigger: CCGAGGGCTGAGCCCCGCCCAGCTCCCCTCCACAAT...AGCCGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp AGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGATTGTGGAGGGGAGCTaGGCGGGGCTCAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: SWAGLSPRRTGSTAAPASIVEGS*AGLSPR
Trigger: CCGAGGGCTGAGCCCCGCCCAGCTCCCCTCCACAAT...CGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR TCA 90 bp GCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGAGGGCAGGCCAAGGTTaGGGGCAAACAGGCGATCGG +
Preference number: 4 (lower is better)
Translates to: AGRGSALGELAVQPPQPRRAGQG*GQTGDR
Trigger: CCGATCGCCTGTTTGCCCTCAACCTTGGCCTGCCCT...CCGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR GCA 90 bp CGCCTGCTCCAGAGTGGCGGTGAAGAGGAAGCAGCGGCAGGGGACGCCCGCGGCGTGGTCACACAGCGCTaGCAGGAGCCTAGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: RLLQSGGEEEAAAGDARGVVTQR*QEPSVS
Trigger: GGACACGCTAGGCTCCTGGCAGCGCTGTGTGACCAC...GCCGCGGGCGTCCCCTGCCGCTGCTTCCTCTTCACCGCCACTCTGGAGCAGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR GCA 90 bp AGCAGCGGCAGGGGACGCCCGCGGCTCGGGCACACTGGACGTACCTGGCGCGGCGCGACCCGTTTCCCTTaGTTCAGGGCTGTCTCACAC +
Preference number: 4 (lower is better)
Translates to: SSGRGRPRLGHTGRTWRGATRFP*FRAVSH
Trigger: GTGTGAGACAGCCCTGAAGCAAGGGAAACGGGTCGC...GCCGCGCCAGGTACGTCCAGTGTGCCCGAGCCGCGGGCGTCCCCTGCCGCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR GCA 90 bp GGAAGCAGCGGCAGGGGACGCCCGCGGCTCGGGCACACTGGACGTACCTGGCGCTTGTTGTGGCGCGCCTaGTCCAGAGTGGCGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GSSGRGRPRLGHTGRTWRLLWRA*SRVAVK
Trigger: CTTCACCGCCACTCTGGAGCAGGCGCGCCACAACAA...GCGCCAGGTACGTCCAGTGTGCCCGAGCCGCGGGCGTCCCCTGCCGCTGCTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CCA 90 bp AGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGTTCCGGTCCGTAACCTaGGTCAGGGGTCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SWAGLSPRRTGSTAAPASFRSVT*VRGPLP
Trigger: GGGCAGGGGACCCCTGACCCAGGTTACGGACCGGAA...CGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp CTCCAGAGTGGCGGTGAAGAGGAAGCAGCGGCAGGGGACGCCCGCGGCTCGGGCCCCGGCTTCAACTCCTaGGTCCCGGTAGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LQSGGEEEAAAGDARGSGPGFNS*VPVVEG
Trigger: CCCCTCAACTACCGGGACCCAGGAGTTGAAGCCGGG...GCCCGAGCCGCGGGCGTCCCCTGCCGCTGCTTCCTCTTCACCGCCACTCTGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCCCAGCCACCTTGCCCTaGGGTTTCACCCCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: ELGGAQPSENWQYSRPSLPATLP*GFTPAA
Trigger: CGCAGCTGGGGTGAAACCCCAGGGCAAGGTGGCTGG...GAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000600910.5
CDS-3UTR CCA 90 bp AGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGTGGCCACCAGCACCTaGAAGGGGACCCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SWAGLSPRRTGSTAAPASVATST*KGTPSF
Trigger: GAAGCTGGGGGTCCCCTTCCAGGTGCTGGTGGCCAC...CGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp AAGCAGCGGCAGGGGACGCCCGCGGCTCGGGCACACTGGACGTACCTGGCGCGGAGAACTCCTCAGGCGTaGCGAAGGGCAGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: KQRQGTPAARAHWTYLARRTPQA*RRAGQG
Trigger: ACCTTGGCCTGCCCTTCGCCACGCCTGAGGAGTTCT...CCGCGCCAGGTACGTCCAGTGTGCCCGAGCCGCGGGCGTCCCCTGCCGCTGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CCA 90 bp CGATCGGCGCAGGAGAAGTCTTTCTTCTTCCGCCCCGGGGCCCAGTTGGCCGGGCAACCACCTCCGGGCTaGCGCTCAGGAGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RSAQEKSFFFRPGAQLAGQPPPG*RSGGPW
Trigger: CCAGGGCCCTCCTGAGCGCCAGCCCGGAGGTGGTTG...CCCGGCCAACTGGGCCCCGGGGCGGAAGAAGAAAGACTTCTCCTGCGCCGATCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp AGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGCAGCCCTCGGAGAACTaGCAGTACAGCCGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SWAGLSPRRTGSTAAPASQPSEN*QYSRPS
Trigger: GCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTG...CGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR TCA 90 bp GCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGCGGCTGCTGGCCACTTaGGAAAGAACTCCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: AGRGSALGELAVQPPQPRRLLAT*ERTPQA
Trigger: CGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCG...CCGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR GCA 90 bp GCGCGGCTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCGGGTCAGGGGTCCCCTaGCCAGGACCAGGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: ARLAASGFVLSMATRFPCGSGVP*PGPGLA
Trigger: GGCAAGCCCTGGTCCTGGGCAGGGGACCCCTGACCC...GCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp GCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGGCTGGGATTCTGGTGTaGGGGTCTCTTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: AGRGSALGELAVQPPQPRAGILV*GSLPSA
Trigger: TGCGCTGGGAAGAGACCCGCACACCAGAATCCCAGC...CCGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR GCA 90 bp GGAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTGCAGATGGTCCCACATaGCCGTCACCGGCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: GAGRGSALGELAVQPPQPADGPT*PSPASG
Trigger: ACCGGAAGCCGGTGACGGGCATGTGGGACCATCTGC...AGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR GCA 90 bp GCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGTCGTTGGCCTGCTCCTaGAGATGGTCCCACATGCCC +
Preference number: 4 (lower is better)
Translates to: AGRGSALGELAVQPPQPRSLACS*RWSHMP
Trigger: GGGCATGTGGGACCATCTGCAGGAGCAGGCCAACGA...CCGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR GCA 90 bp CGCCCCGGGGCCCAGTTGGCCGGGCGTCCGGCTGCGTCTCCCACAAAGATGCTGCGATGGATATGGGCGTaGCGTCGTTGGCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RPGAQLAGRPAASPTKMLRWIWA*RRWPAP
Trigger: AGGAGCAGGCCAACGACGGCACGCCCATATCCATCG...CAGCATCTTTGTGGGAGACGCAGCCGGACGCCCGGCCAACTGGGCCCCGGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp GAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCCCCAGGGAATCCCACTaGGACAACCACCTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: ELGGAQPSENWQYSRPSLPRESH*DNHLRA
Trigger: AGCCCGGAGGTGGTTGTCGCAGTGGGATTCCCTGGG...GAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp TGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGCTCCCGGCTTCAACTCCTaGGTCCCGGTAGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: WAGLSPRRTGSTAAPASAPGFNS*VPVVEG
Trigger: CCCCTCAACTACCGGGACCCAGGAGTTGAAGCCGGG...AGCCGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GGGAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCGCCAGGCGGAGTATCTaGCTGGGATTCTGGTGTGCG +
Preference number: 4 (lower is better)
Translates to: GSWAGLSPRRTGSTAAPAARRSI*LGFWCA
Trigger: CGCACACCAGAATCCCAGCCAGATACTCCGCCTGGC...GGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp AGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGCTTGAACTCCTCGGCTaGCAGCTTCCCGCGCCCGAT +
Preference number: 4 (lower is better)
Translates to: SWAGLSPRRTGSTAAPASLELLG*QLPAPD
Trigger: ATCGGGCGCGGGAAGCTGCCAGCCGAGGAGTTCAAG...CGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GGGGCCCAGTTGGCCGGGCGTCCGGCTGCGTCTCCCACAAAGATGCTGTCCCCGCTTGAACTCCTCGGCTaGCAGCTTCCCGCGCCCGAT +
Preference number: 4 (lower is better)
Translates to: GAQLAGRPAASPTKMLSPLELLG*QLPAPD
Trigger: ATCGGGCGCGGGAAGCTGCCAGCCGAGGAGTTCAAG...CGGGGACAGCATCTTTGTGGGAGACGCAGCCGGACGCCCGGCCAACTGGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GGAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTGCCTGCTCCTGCAGATaGTCCCACATGCCCGTCACC +
Preference number: 4 (lower is better)
Translates to: GAGRGSALGELAVQPPQPACSCR*SHMPVT
Trigger: GGTGACGGGCATGTGGGACCATCTGCAGGAGCAGGC...AGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGTGTCCCCGATGGATATaGGCGTGCCGTCGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: AGRGSALGELAVQPPQPRCPRWI*ACRRWP
Trigger: AGGCCAACGACGGCACGCCCATATCCATCGGGGACA...CCGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp AGCAGCGGCAGGGGACGCCCGCGGCTCGGGCACACTGGACGTACCTGGCGCGGCCTCGAAGCCGGCTGCTaGCCACTTGAGAAAGAACTC +
Preference number: 4 (lower is better)
Translates to: SSGRGRPRLGHTGRTWRGLEAGC*PLEKEL
Trigger: GAGTTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAG...GCCGCGCCAGGTACGTCCAGTGTGCCCGAGCCGCGGGCGTCCCCTGCCGCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CCA 90 bp GAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCCCTCGGATCAAAGGCTaGGAGCTCGAAGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: ELGGAQPSENWQYSRPSLPRIKG*ELEAGC
Trigger: GCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGAGG...GAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GGAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCCTCGGATCAAAGGCTaGGAGCTCGAAGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: GAGRGSALGELAVQPPQPPRIKG*ELEAGC
Trigger: GCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGAGG...AGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GCCCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGACAACCACCTCCGGGCTaGCGCTCAGGAGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: APASAPPIAGTGSPGWQRQPPPG*RSGGPW
Trigger: CCAGGGCCCTCCTGAGCGCCAGCCCGGAGGTGGTTG...TCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GGGAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCGCCTTCAGCCAGCGTTaGGGCCTCGAACTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GSWAGLSPRRTGSTAAPAAFSQR*GLELLP
Trigger: AGGAAGCAGTTCGAGGCCCCAACGCTGGCTGAAGGC...GGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp AGCGGCAGGGGACGCCCGCGGCTCGGGCACACTGGACGTACCTGGCGCGGCTCGACGGGATCTCCAGGATaGCAGAGAAGCCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SGRGRPRLGHTGRTWRGSTGSPG*QRSLQP
Trigger: TGGCTGAAGGCTTCTCTGCCATCCTGGAGATCCCGT...CGAGCCGCGCCAGGTACGTCCAGTGTGCCCGAGCCGCGGGCGTCCCCTGCCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR TCA 90 bp CACTGCGACAACCACCTCCGGGCTGGCGCTCAGGAGGGCCCTGGACTCGGGGAGCGGCTGCTGGCCACTTaGGAAAGAACTCCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: HCDNHLRAGAQEGPGLGERLLAT*ERTPQA
Trigger: CGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCG...CTCCCCGAGTCCAGGGCCCTCCTGAGCGCCAGCCCGGAGGTGGTTGTCGCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR TCA 90 bp AGGGAATCCCACTGCGACAACCACCTCCGGGCTGGCGCTCAGGAGGGCCCTGGAGCTCCAGAGTGGCGGTaGAGAGGAAGCAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: RESHCDNHLRAGAQEGPGAPEWR*RGSSGR
Trigger: CCTGCCGCTGCTTCCTCTTCACCGCCACTCTGGAGC...TCCAGGGCCCTCCTGAGCGCCAGCCCGGAGGTGGTTGTCGCAGTGGGATTCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp CCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCGGGTCAGGGGTCCCCTaGCCAGGACCAGGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: PASAPPIAGTGSPGWQRSGSGVP*PGPGLA
Trigger: GGCAAGCCCTGGTCCTGGGCAGGGGACCCCTGACCC...GCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR GCA 90 bp CCCCGGGGCCCAGTTGGCCGGGCGTCCGGCTGCGTCTCCCACAAAGATGCTGTCCAAAGCCAGCCACCTTaGCCTGGGGTTTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: PRGPVGRASGCVSHKDAVQSQPP*PGVSPQ
Trigger: CTGGGGTGAAACCCCAGGGCAAGGTGGCTGGCTTTG...GACAGCATCTTTGTGGGAGACGCAGCCGGACGCCCGGCCAACTGGGCCCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR GCA 90 bp ACTTCCCGGCCCCAGGGAATCCCACTGCGACAACCACCTCCGGGCTGGCGCTCACGGTACAAGCCTGCGTaGGTGGCCACCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: TSRPQGIPLRQPPPGWRSRYKPA*VATSTW
Trigger: CCAGGTGCTGGTGGCCACGCACGCAGGCTTGTACCG...TGAGCGCCAGCCCGGAGGTGGTTGTCGCAGTGGGATTCCCTGGGGCCGGGAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp TTCCCGGCCCCAGGGAATCCCACTGCGACAACCACCTCCGGGCTGGCGCTCAGGCTTCCGGTACAAGCCTaGGTGCGTGGCCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: FPAPGNPTATTTSGLALRLPVQA*VRGHQH
Trigger: GTGCTGGTGGCCACGCACGCAGGCTTGTACCGGAAG...CCTGAGCGCCAGCCCGGAGGTGGTTGTCGCAGTGGGATTCCCTGGGGCCGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp GGAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGATGGATATGGGCGTaGCGTCGTTGGCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GAGRGSALGELAVQPPQPRWIWA*RRWPAP
Trigger: AGGAGCAGGCCAACGACGGCACGCCCATATCCATCG...AGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR GCA 90 bp GAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCCGATGGATATGGGCGTaGCGTCGTTGGCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ELGGAQPSENWQYSRPSLRWIWA*RRWPAP
Trigger: AGGAGCAGGCCAACGACGGCACGCCCATATCCATCG...GAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR GCA 90 bp CGCCTGCTCCAGAGTGGCGGTGAAGAGGAAGCAGCGGCAGGGGACGCCCGCGGCCCGGCCGACACGAGGTaGTTCTTGAGAAAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: RLLQSGGEEEAAAGDARGPADTR*FLRKVD
Trigger: GTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGG...GCCGCGGGCGTCCCCTGCCGCTGCTTCCTCTTCACCGCCACTCTGGAGCAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR GCA 90 bp ATCCCACTGCGACAACCACCTCCGGGCTGGCGCTCAGGAGGGCCCTGGACTCGGGTGGTCACACAGCGCTaGCAGGAGCCTAGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: IPLRQPPPGWRSGGPWTRVVTQR*QEPSVS
Trigger: GGACACGCTAGGCTCCTGGCAGCGCTGTGTGACCAC...CCGAGTCCAGGGCCCTCCTGAGCGCCAGCCCGGAGGTGGTTGTCGCAGTGGGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp GAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCTTGTTGTGGCGCGCCTaGTCCAGAGTGGCGGTGAAG +
Preference number: 4 (lower is better)
Translates to: ELGGAQPSENWQYSRPSLLLWRA*SRVAVK
Trigger: CTTCACCGCCACTCTGGAGCAGGCGCGCCACAACAA...GAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp TTGGCCTTGAACTCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTGCCGAGGGCAGGAAGATaGGGGGCGCTCCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LALNSSAGSFPRPMLIWLPRAGR*GALPQG
Trigger: CCCCTGGGGGAGCGCCCCCCATCTTCCTGCCCTCGG...CAACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGAGTTCAAGGCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000627232.2
ENST00000636214.1
CDS-3UTR CCA 90 bp ATCCCACTGCGACAACCACCTCCGGGCTGGCGCTCAGGAGGGCCCTGGACTCGGCCCGGCTTCAACTCCTaGGTCCCGGTAGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: IPLRQPPPGWRSGGPWTRPGFNS*VPVVEG
Trigger: CCCCTCAACTACCGGGACCCAGGAGTTGAAGCCGGG...CCGAGTCCAGGGCCCTCCTGAGCGCCAGCCCGGAGGTGGTTGTCGCAGTGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GGAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTGGCGGAGTATCTGGCTaGGATTCTGGTGTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: GAGRGSALGELAVQPPQPGGVSG*DSGVRV
Trigger: GACCCGCACACCAGAATCCCAGCCAGATACTCCGCC...AGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp CACTGCGACAACCACCTCCGGGCTGGCGCTCAGGAGGGCCCTGGACTCGGGGAGGCCAGGCGGAGTATCTaGCTGGGATTCTGGTGTGCG +
Preference number: 4 (lower is better)
Translates to: HCDNHLRAGAQEGPGLGEARRSI*LGFWCA
Trigger: CGCACACCAGAATCCCAGCCAGATACTCCGCCTGGC...CTCCCCGAGTCCAGGGCCCTCCTGAGCGCCAGCCCGGAGGTGGTTGTCGCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp AGAGTGGCGGTGAAGAGGAAGCAGCGGCAGGGGACGCCCGCGGCTCGGGCACACGCCAGGCGGAGTATCTaGCTGGGATTCTGGTGTGCG +
Preference number: 4 (lower is better)
Translates to: RVAVKRKQRQGTPAARAHARRSI*LGFWCA
Trigger: CGCACACCAGAATCCCAGCCAGATACTCCGCCTGGC...GTGTGCCCGAGCCGCGGGCGTCCCCTGCCGCTGCTTCCTCTTCACCGCCACTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp CTCCAGAGTGGCGGTGAAGAGGAAGCAGCGGCAGGGGACGCCCGCGGCTCGGGCAGTCACTGGGGCCAGTaGGAAAGACCTTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LQSGGEEEAAAGDARGSGSHWGQ*ERPSQS
Trigger: GCTCTGGGAAGGTCTTTCCCACTGGCCCCAGTGACT...GCCCGAGCCGCGGGCGTCCCCTGCCGCTGCTTCCTCTTCACCGCCACTCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR CCA 90 bp TTCCCGGCCCCAGGGAATCCCACTGCGACAACCACCTCCGGGCTGGCGCTCAGGGCGGCTCGCGGCGTCTaGGTTTGTGTTGTCGATGGC +
Preference number: 4 (lower is better)
Translates to: FPAPGNPTATTTSGLALRAARGV*VCVVDG
Trigger: GCCATCGACAACACAAACCCAGACGCCGCGAGCCGC...CCTGAGCGCCAGCCCGGAGGTGGTTGTCGCAGTGGGATTCCCTGGGGCCGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp TCGGGCACACTGGACGTACCTGGCGCGGCTCGCGGCGTCTGGGTTTGTGTTGTCCACACTGGACGTACCTaGCGCGGCTCGCGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: SGTLDVPGAARGVWVCVVHTGRT*RGSRRL
Trigger: CAGACGCCGCGAGCCGCGCCAGGTACGTCCAGTGTG...GACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTACGTCCAGTGTGCCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CCA 90 bp AGGCGTGGCGAAGGGCAGGCCAAGGTTGAGGGCAAACAGGCGATCGGCGCAGGACACACTGGACGTACCTaGCGCGGCTCGCGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: RRGEGQAKVEGKQAIGAGHTGRT*RGSRRL
Trigger: CAGACGCCGCGAGCCGCGCCAGGTACGTCCAGTGTG...TCCTGCGCCGATCGCCTGTTTGCCCTCAACCTTGGCCTGCCCTTCGCCACGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp CTGGGGCCAGTGGGAAAGACCTTCCCAGAGCGTGTGGTGATGAGCGTCCCGTCCGCGGCTCGGGCACACTaGACGTACCTGGCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: LGPVGKTFPERVVMSVPSAARAH*TYLARL
Trigger: GAGCCGCGCCAGGTACGTCCAGTGTGCCCGAGCCGC...GGACGGGACGCTCATCACCACACGCTCTGGGAAGGTCTTTCCCACTGGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR CCA 90 bp CACTGCGACAACCACCTCCGGGCTGGCGCTCAGGAGGGCCCTGGACTCGGGGAGCGAAACCGGTTGTTGTaGCGCGCCTGCTCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: HCDNHLRAGAQEGPGLGERNRLL*RACSRV
Trigger: CACTCTGGAGCAGGCGCGCCACAACAACCGGTTTCG...CTCCCCGAGTCCAGGGCCCTCCTGAGCGCCAGCCCGGAGGTGGTTGTCGCAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCCGAAACCGGTTGTTGTaGCGCGCCTGCTCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: ELGGAQPSENWQYSRPSLRNRLL*RACSRV
Trigger: CACTCTGGAGCAGGCGCGCCACAACAACCGGTTTCG...GAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp CTGGACGTACCTGGCGCGGCTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCGACATTGTGGAGGGGAGCTaGGCGGGGCTCAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: LDVPGAARGVWVCVVDGDIVEGS*AGLSPR
Trigger: CCGAGGGCTGAGCCCCGCCCAGCTCCCCTCCACAAT...GTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTACGTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGAAACAGCGTTTATTGTaGAGGGGAGCTGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: AGRGSALGELAVQPPQPRKQRLL*RGAGRG
Trigger: GCCCCGCCCAGCTCCCCTCCACAATAAACGCTGTTT...CCGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR TCA 90 bp GAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCCTCCCAGCCGGGGTTTaGCTTCCGCATACGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ELGGAQPSENWQYSRPSLLPAGV*LPHTLL
Trigger: AAGAAGCGTATGCGGAAGTCAAACCCCGGCTGGGAG...GAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR TCA 90 bp GGGAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCACCCCAGCTGCGGTaGACACTAGCAACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GSWAGLSPRRTGSTAAPASPQLR*TLATSP
Trigger: TGGAGAAGTTGCTAGTGTTCACCGCAGCTGGGGTGA...GGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR TCA 90 bp CCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGGAGGCAGAGAGGCCCTaGGCGGGAGACAGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: PSLGSTHSRNGISRMAEKEAERP*AGDSPR
Trigger: CCGAGGACTGTCTCCCGCTCAGGGCCTCTCTGCCTC...CTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR TCA 90 bp GCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGACACGAGGTGCTTCTTaGGAAAGGTGGACTTCCCGG +
Preference number: 4 (lower is better)
Translates to: AGRGSALGELAVQPPQPRTRGAS*ERWTSR
Trigger: CCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGT...CCGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR TCA 90 bp CTGGACGTACCTGGCGCGGCTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCGACGCTCCAGAGTGGCGGTaGAGAGGAAGCAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: LDVPGAARGVWVCVVDGDAPEWR*RGSSGR
Trigger: CCTGCCGCTGCTTCCTCTTCACCGCCACTCTGGAGC...GTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTACGTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR TCA 90 bp GGCAGGGGACGCCCGCGGCTCGGGCACACTGGACGTACCTGGCGCGGCTCGCGGATACATGACCATGTCTaGCACGGGGATATGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GRGRPRLGHTGRTWRGSRIHDHV*HGDMRG
Trigger: TCCTCTCATATCCCCGTGTCAGACATGGTCATGTAT...CCGCGAGCCGCGCCAGGTACGTCCAGTGTGCCCGAGCCGCGGGCGTCCCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR GCA 90 bp CTCCTGCAGATGGTCCCACATGCCCGTCACCGGCTTCCGGTACAAGCCTGCGTGCCCAGGACCAGGGCTTaGCCGTCCGAGGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LLQMVPHARHRLPVQACVPRTRA*PSEGRK
Trigger: CTTCCTGCCCTCGGACGGGCAAGCCCTGGTCCTGGG...CACGCAGGCTTGTACCGGAAGCCGGTGACGGGCATGTGGGACCATCTGCAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp TGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGCTCCGGGTCTCAGGATCTaGGACCAGCTCCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: WAGLSPRRTGSTAAPASAPGLRI*DQLHLS
Trigger: ACTCAAGTGGAGCTGGTCGCAGATCCTGAGACCCGG...AGCCGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600910.5
ENST00000627232.2
CDS-3UTR GCA 90 bp AGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGTCCCAGCTGTTTCACTaGCACTGTCCGGGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SWAGLSPRRTGSTAAPASSQLFH*HCPGLR
Trigger: CCTGAGACCCGGACAGTGGCAGTGAAACAGCTGGGA...CGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR GCA 90 bp CTGAGCGGGAGACAGTCCTCGGATCAAAGGCTGGGAGCTCGAAGCCGGCTGCTGCTCGCCCATCCTGGGTaGCGGCCTGGGGAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: LSGRQSSDQRLGARSRLLLAHPG*RPGEQV
Trigger: TACCTGCTCCCCAGGCCGGCACCCAGGATGGGCGAG...CAGCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGAGGACTGTCTCCCGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR CCA 90 bp TCCGGGTCTCAGGATCTGCGACCAGCTCCACTGAGGATTGGAGGGGTGGAGTCACCGAGGGCAGGAAGATaGGGGGCGCTCCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SGSQDLRPAPLRIGGVESPRAGR*GALPQG
Trigger: CCCCTGGGGGAGCGCCCCCCATCTTCCTGCCCTCGG...TGACTCCACCCCTCCAATCCTCAGTGGAGCTGGTCGCAGATCCTGAGACCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR CCA 90 bp TCGGGCACACTGGACGTACCTGGCGCGGCTCGCGGCGTCTGGGTTTGTGTTGTCTTCCGGTCCGTAACCTaGGTCAGGGGTCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SGTLDVPGAARGVWVCVVFRSVT*VRGPLP
Trigger: GGGCAGGGGACCCCTGACCCAGGTTACGGACCGGAA...GACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTACGTCCAGTGTGCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GGGAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCATCTGGCTGGGATTCTaGTGTGCGGGTCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GSWAGLSPRRTGSTAAPAIWLGF*CAGLFP
Trigger: TGGGAAGAGACCCGCACACCAGAATCCCAGCCAGAT...GGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GGGAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCAGATCCTCCAGTCACTaGGGCCAGTGGGAAAGACCT +
Preference number: 4 (lower is better)
Translates to: GSWAGLSPRRTGSTAAPARSSSH*GQWERP
Trigger: AGGTCTTTCCCACTGGCCCCAGTGACTGGAGGATCT...GGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000600910.5
CDS-3UTR CCA 90 bp CGATCGGCGCAGGAGAAGTCTTTCTTCTTCCGCCCCGGGGCCCAGTTGGCCGGGACAAGCCTGCGTGCGTaGCCACCAGCACCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: RSAQEKSFFFRPGAQLAGTSLRA*PPAPGR
Trigger: CCTTCCAGGTGCTGGTGGCCACGCACGCAGGCTTGT...CCCGGCCAACTGGGCCCCGGGGCGGAAGAAGAAAGACTTCTCCTGCGCCGATCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp CTTCCCGGCCCCAGGGAATCCCACTGCGACAACCACCTCCGGGCTGGCGCTCAGAGAACTCCTCAGGCGTaGCGAAGGGCAGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: LPGPRESHCDNHLRAGAQRTPQA*RRAGQG
Trigger: ACCTTGGCCTGCCCTTCGCCACGCCTGAGGAGTTCT...CTGAGCGCCAGCCCGGAGGTGGTTGTCGCAGTGGGATTCCCTGGGGCCGGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp TTGGCCTTGAACTCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTGCAACCACCTCCGGGCTaGCGCTCAGGAGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LALNSSAGSFPRPMLIWLQPPPG*RSGGPW
Trigger: CCAGGGCCCTCCTGAGCGCCAGCCCGGAGGTGGTTG...CAACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGAGTTCAAGGCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp TCAGGCGTGGCGAAGGGCAGGCCAAGGTTGAGGGCAAACAGGCGATCGGCGCAGCAGCCCTCGGAGAACTaGCAGTACAGCCGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SGVAKGRPRLRANRRSAQQPSEN*QYSRPS
Trigger: GCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTG...CTGCGCCGATCGCCTGTTTGCCCTCAACCTTGGCCTGCCCTTCGCCACGCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GCGCGGCTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCCGGCGGATCAAAGGCTaGGAGCTCGAAGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: ARLAASGFVLSMATRFPCRRIKG*ELEAGC
Trigger: GCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGCCG...GCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625216.2
CDS-3UTR CCA 90 bp CCCCGGGGCCCAGTTGGCCGGGCGTCCGGCTGCGTCTCCCACAAAGATGCTGTCACAAGATCCTTGCCCTaGGGTTTCACCCCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: PRGPVGRASGCVSHKDAVTRSLP*GFTPAA
Trigger: CGCAGCTGGGGTGAAACCCCAGGGCAAGGATCTTGT...GACAGCATCTTTGTGGGAGACGCAGCCGGACGCCCGGCCAACTGGGCCCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000627232.2
CDS-3UTR TCA 90 bp TTGGCCTTGAACTCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTGGAGGCAGAGAGGCCCTaGGCGGGAGACAGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: LALNSSAGSFPRPMLIWLEAERP*AGDSPR
Trigger: CCGAGGACTGTCTCCCGCTCAGGGCCTCTCTGCCTC...CAACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGAGTTCAAGGCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR TCA 90 bp TGCTCCAGAGTGGCGGTGAAGAGGAAGCAGCGGCAGGGGACGCCCGCGGCTCGGACACGAGGTGCTTCTTaGGAAAGGTGGACTTCCCGG +
Preference number: 4 (lower is better)
Translates to: CSRVAVKRKQRQGTPAARTRGAS*ERWTSR
Trigger: CCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGT...CCGAGCCGCGGGCGTCCCCTGCCGCTGCTTCCTCTTCACCGCCACTCTGGAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR TCA 90 bp CCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCGCTCCAGAGTGGCGGTaGAGAGGAAGCAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: PASAPPIAGTGSPGWQRSAPEWR*RGSSGR
Trigger: CCTGCCGCTGCTTCCTCTTCACCGCCACTCTGGAGC...GCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000593946.5
ENST00000597965.2
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR GCA 90 bp GGCCTGCTCCTGCAGATGGTCCCACATGCCCGTCACCGGCTTCCGGTACAAGCCGGGACACCAGAGGGGTaGCAGGCGGAGTATCTGGCT +
Preference number: 4 (lower is better)
Translates to: GLLLQMVPHARHRLPVQAGTPEG*QAEYLA
Trigger: AGCCAGATACTCCGCCTGGCACCCCTCTGGTGTCCC...GGCTTGTACCGGAAGCCGGTGACGGGCATGTGGGACCATCTGCAGGAGCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp CCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCGGTACAAGCCTGCGTaGGTGGCCACCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: PSLGSTHSRNGISRMAEKRYKPA*VATSTW
Trigger: CCAGGTGCTGGTGGCCACGCACGCAGGCTTGTACCG...CTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR GCA 90 bp AGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGAGCTCGAAGCCGGCTaGTGGCCACTTGAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: SWAGLSPRRTGSTAAPASELEAG*WPLEKE
Trigger: TTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTC...CGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR GCA 90 bp CCCCGGGGCCCAGTTGGCCGGGCGTCCGGCTGCGTCTCCCACAAAGATGCTGTCGAGCTCGAAGCCGGCTaGTGGCCACTTGAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: PRGPVGRASGCVSHKDAVELEAG*WPLEKE
Trigger: TTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTC...GACAGCATCTTTGTGGGAGACGCAGCCGGACGCCCGGCCAACTGGGCCCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GGGGCCAGTGGGAAAGACCTTCCCAGAGCGTGTGGTGATGAGCGTCCCGTCCAGTTCCGGTCCGTAACCTaGGTCAGGGGTCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GASGKDLPRACGDERPVQFRSVT*VRGPLP
Trigger: GGGCAGGGGACCCCTGACCCAGGTTACGGACCGGAA...CTGGACGGGACGCTCATCACCACACGCTCTGGGAAGGTCTTTCCCACTGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000636214.1
CDS-3UTR CCA 90 bp GGAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGCAGGGTCAGTGGGTaGAGGCCATTGACCAAATAC +
Preference number: 4 (lower is better)
Translates to: GAGRGSALGELAVQPPQPRRVSG*RPLTKY
Trigger: GTATTTGGTCAATGGCCTCCACCCACTGACCCTGCG...AGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp CCCCGGGGCCCAGTTGGCCGGGCGTCCGGCTGCGTCTCCCACAAAGATGCTGTCATCTGGCTGGGATTCTaGTGTGCGGGTCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PRGPVGRASGCVSHKDAVIWLGF*CAGLFP
Trigger: TGGGAAGAGACCCGCACACCAGAATCCCAGCCAGAT...GACAGCATCTTTGTGGGAGACGCAGCCGGACGCCCGGCCAACTGGGCCCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp CTGAGCGGGAGACAGTCCTCGGATCAAAGGCTGGGAGCTCGAAGCCGGCTGCTGCCAGCCACCTTGCCCTaGGGTTTCACCCCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: LSGRQSSDQRLGARSRLLPATLP*GFTPAA
Trigger: CGCAGCTGGGGTGAAACCCCAGGGCAAGGTGGCTGG...CAGCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGAGGACTGTCTCCCGCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR CCA 90 bp TGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGCTCGCCCGATGCTCATCTaGTTGGTGAAGATCACCAGC +
Preference number: 4 (lower is better)
Translates to: WAGLSPRRTGSTAAPASARPMLI*LVKITS
Trigger: GCTGGTGATCTTCACCAACCAGATGAGCATCGGGCG...AGCCGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp CACCTTGGCCTTGAACTCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTGGCCACCAGCACCTaGAAGGGGACCCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: HLGLELLGWQLPAPDAHLVATST*KGTPSF
Trigger: GAAGCTGGGGGTCCCCTTCCAGGTGCTGGTGGCCAC...CAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGAGTTCAAGGCCAAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000627232.2
ENST00000636214.1
CDS-3UTR CCA 90 bp CTGGACGTACCTGGCGCGGCTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCGACGGGCTGTCTCACACGTaGTCACACAGCGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LDVPGAARGVWVCVVDGDGLSHT*SHSAAR
Trigger: CCTGGCAGCGCTGTGTGACCACGTGTGAGACAGCCC...GTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTACGTCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CCA 90 bp GCCCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAACAGCCTGGATCATGTaGCCCAGCCAGTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: APASAPPIAGTGSPGWQRTAWIM*PSQCPC
Trigger: GCAGGGGCACTGGCTGGGCCACATGATCCAGGCTGT...TCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597965.2
CDS-3UTR CCA 90 bp GCCCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAGCGGCTCGGGCACACTaGACGTACCCTGTTCACGTG +
Preference number: 4 (lower is better)
Translates to: APASAPPIAGTGSPGWQRAARAH*TYPVHV
Trigger: CACGTGAACAGGGTACGTCCAGTGTGCCCGAGCCGC...TCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600910.5
CDS-3UTR TCA 90 bp CACCTTGGCCTTGAACTCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGAGGGCAGGCCAAGGTTaGGGGCAAACAGGCGATCGG +
Preference number: 4 (lower is better)
Translates to: HLGLELLGWQLPAPDAHLRAGQG*GQTGDR
Trigger: CCGATCGCCTGTTTGCCCTCAACCTTGGCCTGCCCT...CAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGAGTTCAAGGCCAAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR TCA 90 bp GAGCGGGAGACAGTCCTCGGATCAAAGGCTGGGAGCTCGAAGCCGGCTGCTGGCCGGCTGCTGGCCACTTaGGAAAGAACTCCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: ERETVLGSKAGSSKPAAGRLLAT*ERTPQA
Trigger: CGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCG...GCCAGCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGAGGACTGTCTCCCGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR TCA 90 bp TCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTGGTGAAGATCACCGCTCCAGAGTGGCGGTaGAGAGGAAGCAGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: SSAGSFPRPMLIWLVKITAPEWR*RGSSGR
Trigger: CCTGCCGCTGCTTCCTCTTCACCGCCACTCTGGAGC...GGTGATCTTCACCAACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR TCA 90 bp GGAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTTCTGACACGGGGATATaGGAGGAGTCCGTCATCTCT +
Preference number: 4 (lower is better)
Translates to: GAGRGSALGELAVQPPQPSDTGI*EESVIS
Trigger: AGAGATGACGGACTCCTCTCATATCCCCGTGTCAGA...AGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR TCA 90 bp TGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGCTTCCTGTAGCCATACATaGCCATGTCTGACACGGGGA +
Preference number: 4 (lower is better)
Translates to: WAGLSPRRTGSTAAPASASCSHT*PCLTRG
Trigger: TCCCCGTGTCAGACATGGTCATGTATGGCTACAGGA...AGCCGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR GCA 90 bp ACTGCCACTGTCCGGGTCTCAGGATCTGCGACCAGCTCCACTGAGGATTGGAGGCCCAGGACCAGGGCTTaGCCGTCCGAGGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TATVRVSGSATSSTEDWRPRTRA*PSEGRK
Trigger: CTTCCTGCCCTCGGACGGGCAAGCCCTGGTCCTGGG...CCTCCAATCCTCAGTGGAGCTGGTCGCAGATCCTGAGACCCGGACAGTGGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR GCA 90 bp CCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCGGGACACCAGAGGGGTaGCAGGCGGAGTATCTGGCT +
Preference number: 4 (lower is better)
Translates to: PASAPPIAGTGSPGWQRSGTPEG*QAEYLA
Trigger: AGCCAGATACTCCGCCTGGCACCCCTCTGGTGTCCC...GCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR GCA 90 bp CGGCTGCGTCTCCCACAAAGATGCTGTCCCCGATGGATATGGGCGTGCCGTCGTCGGTACAAGCCTGCGTaGGTGGCCACCAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: RLRLPQRCCPRWIWACRRRYKPA*VATSTW
Trigger: CCAGGTGCTGGTGGCCACGCACGCAGGCTTGTACCG...ACGACGGCACGCCCATATCCATCGGGGACAGCATCTTTGTGGGAGACGCAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp CCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCCTTCCGGTACAAGCCTaGGTGCGTGGCCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: PASAPPIAGTGSPGWQRSLPVQA*VRGHQH
Trigger: GTGCTGGTGGCCACGCACGCAGGCTTGTACCGGAAG...GCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR GCA 90 bp GGCAGAGAGGCCCTGAGCGGGAGACAGTCCTCGGATCAAAGGCTGGGAGCTCGAGCAGATGGTCCCACATaGCCGTCACCGGCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: GREALSGRQSSDQRLGARADGPT*PSPASG
Trigger: ACCGGAAGCCGGTGACGGGCATGTGGGACCATCTGC...TCGAGCTCCCAGCCTTTGATCCGAGGACTGTCTCCCGCTCAGGGCCTCTCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp AAAGGTGGACTTCCCGGCCCCAGGGAATCCCACTGCGACAACCACCTCCGGGCTGTGCCGTCGTTGGCCTaGTCCTGCAGATGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: KGGLPGPRESHCDNHLRAVPSLA*SCRWSH
Trigger: GTGGGACCATCTGCAGGAGCAGGCCAACGACGGCAC...AGCCCGGAGGTGGTTGTCGCAGTGGGATTCCCTGGGGCCGGGAAGTCCACCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp AGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGCGTCTCCCACAAAGATaGTGTCCCCGATGGATATGG +
Preference number: 4 (lower is better)
Translates to: SWAGLSPRRTGSTAAPASRLPQR*CPRWIW
Trigger: CCATATCCATCGGGGACAGCATCTTTGTGGGAGACG...CGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR GCA 90 bp AACCGGTTGTTGTGGCGCGCCTGCTCCAGAGTGGCGGTGAAGAGGAAGCAGCGGCCCAGGGAATCCCACTaGGACAACCACCTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: NRLLWRACSRVAVKRKQRPRESH*DNHLRA
Trigger: AGCCCGGAGGTGGTTGTCGCAGTGGGATTCCCTGGG...CCGCTGCTTCCTCTTCACCGCCACTCTGGAGCAGGCGCGCCACAACAACCGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GCCACTGTCCGGGTCTCAGGATCTGCGACCAGCTCCACTGAGGATTGGAGGGGTTTCCGGTCCGTAACCTaGGTCAGGGGTCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ATVRVSGSATSSTEDWRGFRSVT*VRGPLP
Trigger: GGGCAGGGGACCCCTGACCCAGGTTACGGACCGGAA...ACCCCTCCAATCCTCAGTGGAGCTGGTCGCAGATCCTGAGACCCGGACAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR CCA 90 bp CTTGGCCTTGAACTCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTTTCCGGTCCGTAACCTaGGTCAGGGGTCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LGLELLGWQLPAPDAHLVFRSVT*VRGPLP
Trigger: GGGCAGGGGACCCCTGACCCAGGTTACGGACCGGAA...AACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGAGTTCAAGGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000627232.2
ENST00000636214.1
CDS-3UTR CCA 90 bp AGTGGCGGTGAAGAGGAAGCAGCGGCAGGGGACGCCCGCGGCTCGGGCACACTGTCTCTCTTCTCATCTTaGGACACCAGAGGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: SGGEEEAAAGDARGSGTLSLFSS*DTRGVP
Trigger: TGGCACCCCTCTGGTGTCCCAAGATGAGAAGAGAGA...CAGTGTGCCCGAGCCGCGGGCGTCCCCTGCCGCTGCTTCCTCTTCACCGCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp ACTGGGGCCAGTGGGAAAGACCTTCCCAGAGCGTGTGGTGATGAGCGTCCCGTCCCAGCCACCTTGCCCTaGGGTTTCACCCCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: TGASGKDLPRACGDERPVPATLP*GFTPAA
Trigger: CGCAGCTGGGGTGAAACCCCAGGGCAAGGTGGCTGG...GACGGGACGCTCATCACCACACGCTCTGGGAAGGTCTTTCCCACTGGCCCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000636214.1
CDS-3UTR CCA 90 bp TTGGCCTTGAACTCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTGGTGGCCACCAGCACCTaGAAGGGGACCCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LALNSSAGSFPRPMLIWLVATST*KGTPSF
Trigger: GAAGCTGGGGGTCCCCTTCCAGGTGCTGGTGGCCAC...CAACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGAGTTCAAGGCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000627232.2
ENST00000636214.1
CDS-3UTR CCA 90 bp CTCCTGCAGATGGTCCCACATGCCCGTCACCGGCTTCCGGTACAAGCCTGCGTGCCTCGGATCAAAGGCTaGGAGCTCGAAGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLQMVPHARHRLPVQACVPRIKG*ELEAGC
Trigger: GCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGAGG...CACGCAGGCTTGTACCGGAAGCCGGTGACGGGCATGTGGGACCATCTGCAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp TCGGGCACACTGGACGTACCTGGCGCGGCTCGCGGCGTCTGGGTTTGTGTTGTCGCCTTCAGCCAGCGTTaGGGCCTCGAACTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SGTLDVPGAARGVWVCVVAFSQR*GLELLP
Trigger: AGGAAGCAGTTCGAGGCCCCAACGCTGGCTGAAGGC...GACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTACGTCCAGTGTGCCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
3UTR CAA 72 bp ACGTACCTGGCGCGGCTCGCGGCGTCTGGGTTTGTGTaGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TYLARLAASGFV*SMATRFPCFRA
Trigger: AGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR TCA 90 bp ACACTGGACGTACCTGGCGCGGCTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCGCGACCAGCTCCACTTaGGTTCTGGAGCACTTCCGG +
Preference number: 4 (lower is better)
Translates to: TLDVPGAARGVWVCVVDGATSST*VLEHFR
Trigger: CCGGAAGTGCTCCAGAACTCAAGTGGAGCTGGTCGC...GCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTACGTCCAGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627232.2
CDS-3UTR TCA 90 bp AGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGTGCTCATCTGGTTGGTaGAGATCACCAGCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: SWAGLSPRRTGSTAAPASCSSGW*RSPACS
Trigger: GCTACAAGCTGGTGATCTTCACCAACCAGATGAGCA...CGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR TCA 90 bp CGGCTGCGTCTCCCACAAAGATGCTGTCCCCGATGGATATGGGCGTGCCGTCGTAGGGCAGGCCAAGGTTaGGGGCAAACAGGCGATCGG +
Preference number: 4 (lower is better)
Translates to: RLRLPQRCCPRWIWACRRRAGQG*GQTGDR
Trigger: CCGATCGCCTGTTTGCCCTCAACCTTGGCCTGCCCT...ACGACGGCACGCCCATATCCATCGGGGACAGCATCTTTGTGGGAGACGCAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR TCA 90 bp CGTCACCGGCTTCCGGTACAAGCCTGCGTGCGTGGCCACCAGCACCTGGAAGGGACACGAGGTGCTTCTTaGGAAAGGTGGACTTCCCGG +
Preference number: 4 (lower is better)
Translates to: RHRLPVQACVRGHQHLEGTRGAS*ERWTSR
Trigger: CCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGT...CCCTTCCAGGTGCTGGTGGCCACGCACGCAGGCTTGTACCGGAAGCCGGTGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp GGAAAGACCTTCCCAGAGCGTGTGGTGATGAGCGTCCCGTCCAGATCAAAGCCAGGGTCAGGGGTCCCCTaGCCAGGACCAGGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: GKTFPERVVMSVPSRSKPGSGVP*PGPGLA
Trigger: GGCAAGCCCTGGTCCTGGGCAGGGGACCCCTGACCC...TGGCTTTGATCTGGACGGGACGCTCATCACCACACGCTCTGGGAAGGTCTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000636214.1
CDS-3UTR GCA 90 bp GCGGGAGACAGTCCTCGGATCAAAGGCTGGGAGCTCGAAGCCGGCTGCTGGCCATCCCAGCTGTTTCACTaGCACTGTCCGGGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: AGDSPRIKGWELEAGCWPSQLFH*HCPGLR
Trigger: CCTGAGACCCGGACAGTGGCAGTGAAACAGCTGGGA...TGGCCAGCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGAGGACTGTCTCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp GGCCGACACGAGGTGCTTCTTGAGAAAGGTGGACTTCCCGGCCCCAGGGAATCCGGGACACCAGAGGGGTaGCAGGCGGAGTATCTGGCT +
Preference number: 4 (lower is better)
Translates to: GRHEVLLEKGGLPGPRESGTPEG*QAEYLA
Trigger: AGCCAGATACTCCGCCTGGCACCCCTCTGGTGTCCC...GGATTCCCTGGGGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp CCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCAAAGCCAGCCACCTTaGCCTGGGGTTTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: PSLGSTHSRNGISRMAEKQSQPP*PGVSPQ
Trigger: CTGGGGTGAAACCCCAGGGCAAGGTGGCTGGCTTTG...CTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000600910.5
CDS-3UTR GCA 90 bp AGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCCTGTGCCGTCGTTGGCCTaGTCCTGCAGATGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SLGSTHSRNGISRMAEKPVPSLA*SCRWSH
Trigger: GTGGGACCATCTGCAGGAGCAGGCCAACGACGGCAC...AGGCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR GCA 90 bp CGCAGGGTCAGTGGGTGGAGGCCATTGACCAAATACAGTGTGTCCCCCACCCCCCCCAGGGAATCCCACTaGGACAACCACCTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: RRVSGWRPLTKYSVSPTPPRESH*DNHLRA
Trigger: AGCCCGGAGGTGGTTGTCGCAGTGGGATTCCCTGGG...GGGGGTGGGGGACACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCG
63% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR GCA 90 bp GCCCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGACCGGCCGACACGAGGTaGTTCTTGAGAAAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: APASAPPIAGTGSPGWQRPADTR*FLRKVD
Trigger: GTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGG...TCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR GCA 90 bp CTGAGCGGGAGACAGTCCTCGGATCAAAGGCTGGGAGCTCGAAGCCGGCTGCTGTTGTTGTGGCGCGCCTaGTCCAGAGTGGCGGTGAAG +
Preference number: 4 (lower is better)
Translates to: LSGRQSSDQRLGARSRLLLLWRA*SRVAVK
Trigger: CTTCACCGCCACTCTGGAGCAGGCGCGCCACAACAA...CAGCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGAGGACTGTCTCCCGCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp CCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCTTGTTGTGGCGCGCCTaGTCCAGAGTGGCGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PASAPPIAGTGSPGWQRSLLWRA*SRVAVK
Trigger: CTTCACCGCCACTCTGGAGCAGGCGCGCCACAACAA...GCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000593946.5
ENST00000597965.2
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR GCA 90 bp CCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGGTTGGGGCCTCGAACTaGTTCCTGGCAGTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PSLGSTHSRNGISRMAEKVGASN*FLAVVG
Trigger: TCCCACCACTGCCAGGAAGCAGTTCGAGGCCCCAAC...CTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597965.2
CDS-3UTR CCA 90 bp GGTCTCTTCCCAGCGCAGGGTCAGTGGGTGGAGGCCATTGACCAAATACAGTGTCCCGGGACCGCGGCTTaGGCTCACGGCCACTTCCGA +
Preference number: 4 (lower is better)
Translates to: GLFPAQGQWVEAIDQIQCPGTAA*AHGHFR
Trigger: TCGGAAGTGGCCGTGAGCCCAAGCCGCGGTCCCGGG...ACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCGCTGGGAAGAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598020.3
CDS-3UTR CCA 90 bp AGGGAATCCCACTGCGACAACCACCTCCGGGCTGGCGCTCAGGAGGGCCCTGGACGCAGGGTCAGTGGGTaGAGGCCATTGACCAAATAC +
Preference number: 4 (lower is better)
Translates to: RESHCDNHLRAGAQEGPGRRVSG*RPLTKY
Trigger: GTATTTGGTCAATGGCCTCCACCCACTGACCCTGCG...TCCAGGGCCCTCCTGAGCGCCAGCCCGGAGGTGGTTGTCGCAGTGGGATTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp TGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGCTCTTACGGGGAATCTCTaGGTACAAGATCCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: WAGLSPRRTGSTAAPASALTGNL*VQDPPV
Trigger: GACTGGAGGATCTTGTACCCAGAGATTCCCCGTAAG...AGCCGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000600910.5
CDS-3UTR CCA 90 bp GGCCGACACGAGGTGCTTCTTGAGAAAGGTGGACTTCCCGGCCCCAGGGAATCCCTTGAACTCCTCGGCTaGCAGCTTCCCGCGCCCGAT +
Preference number: 4 (lower is better)
Translates to: GRHEVLLEKGGLPGPRESLELLG*QLPAPD
Trigger: ATCGGGCGCGGGAAGCTGCCAGCCGAGGAGTTCAAG...GGATTCCCTGGGGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp TTGAGAAAGGTGGACTTCCCGGCCCCAGGGAATCCCACTGCGACAACCACCTCCGTGGCCACCAGCACCTaGAAGGGGACCCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LRKVDFPAPGNPTATTTSVATST*KGTPSF
Trigger: GAAGCTGGGGGTCCCCTTCCAGGTGCTGGTGGCCAC...GGAGGTGGTTGTCGCAGTGGGATTCCCTGGGGCCGGGAAGTCCACCTTTCTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp AGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCCTACAAGCCTGCGTGCGTaGCCACCAGCACCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SLGSTHSRNGISRMAEKPTSLRA*PPAPGR
Trigger: CCTTCCAGGTGCTGGTGGCCACGCACGCAGGCTTGT...AGGCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GCCCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAGTGTCCCTGTTCACGTaGACATATCCGGCCGACACG +
Preference number: 4 (lower is better)
Translates to: APASAPPIAGTGSPGWQRVSLFT*TYPADT
Trigger: CGTGTCGGCCGGATATGTCCACGTGAACAGGGACAC...TCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CCA 90 bp CTTGGCCTTGAACTCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTGGGCTGTCTCACACGTaGTCACACAGCGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LGLELLGWQLPAPDAHLVGLSHT*SHSAAR
Trigger: CCTGGCAGCGCTGTGTGACCACGTGTGAGACAGCCC...AACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGAGTTCAAGGCCAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp ACTGGGGCCAGTGGGAAAGACCTTCCCAGAGCGTGTGGTGATGAGCGTCCCGTCGCGGCTCGCGGCGTCTaGGTTTGTGTTGTCGATGGC +
Preference number: 4 (lower is better)
Translates to: TGASGKDLPRACGDERPVAARGV*VCVVDG
Trigger: GCCATCGACAACACAAACCCAGACGCCGCGAGCCGC...GACGGGACGCTCATCACCACACGCTCTGGGAAGGTCTTTCCCACTGGCCCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR CCA 90 bp TCCGTCATCTCTCGAAACCGGTTGTTGTGGCGCGCCTGCTCCAGAGTGGCGGTGGCGGCTCGCGGCGTCTaGGTTTGTGTTGTCGATGGC +
Preference number: 4 (lower is better)
Translates to: SVISRNRLLWRACSRVAVAARGV*VCVVDG
Trigger: GCCATCGACAACACAAACCCAGACGCCGCGAGCCGC...CACCGCCACTCTGGAGCAGGCGCGCCACAACAACCGGTTTCGAGAGATGACGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CCA 90 bp CCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCGAAACCGGTTGTTGTaGCGCGCCTGCTCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: PSLGSTHSRNGISRMAEKRNRLL*RACSRV
Trigger: CACTCTGGAGCAGGCGCGCCACAACAACCGGTTTCG...CTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000593946.5
ENST00000597965.2
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CCA 90 bp CCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCGCCTTCAGCCAGCGTTaGGGCCTCGAACTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PASAPPIAGTGSPGWQRSAFSQR*GLELLP
Trigger: AGGAAGCAGTTCGAGGCCCCAACGCTGGCTGAAGGC...GCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000593946.5
ENST00000597965.2
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CCA 90 bp CCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGGCCTTCAGCCAGCGTTaGGGCCTCGAACTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PSLGSTHSRNGISRMAEKAFSQR*GLELLP
Trigger: AGGAAGCAGTTCGAGGCCCCAACGCTGGCTGAAGGC...CTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000593946.5
ENST00000597965.2
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CCA 90 bp GCTGGCCACTTGAGAAAGAACTCCTCAGGCGTGGCGAAGGGCAGGCCAAGGTTGCAGCCCTCGGAGAACTaGCAGTACAGCCGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: AGHLRKNSSGVAKGRPRLQPSEN*QYSRPS
Trigger: GCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTG...CAACCTTGGCCTGCCCTTCGCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR TCA 90 bp AGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCCTGCGACCAGCTCCACTTaGGTTCTGGAGCACTTCCGG +
Preference number: 4 (lower is better)
Translates to: SLGSTHSRNGISRMAEKPATSST*VLEHFR
Trigger: CCGGAAGTGCTCCAGAACTCAAGTGGAGCTGGTCGC...AGGCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000600910.5
ENST00000627232.2
CDS-3UTR TCA 90 bp CGCAGGGTCAGTGGGTGGAGGCCATTGACCAAATACAGTGTGTCCCCCACCCCCCTGGGTCCCGGTAGTTaGGGGGTTAACTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RRVSGWRPLTKYSVSPTPLGPGS*GVNSQL
Trigger: CAGCTGGGAGTTAACCCCTCAACTACCGGGACCCAG...GGGGGTGGGGGACACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR TCA 90 bp CGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGCTGAGGGCAGGCCAAGGTTaGGGGCAAACAGGCGATCGG +
Preference number: 4 (lower is better)
Translates to: RRLGLCCRWRPVSLASGLRAGQG*GQTGDR
Trigger: CCGATCGCCTGTTTGCCCTCAACCTTGGCCTGCCCT...CAGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR TCA 90 bp GCGCGGCTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCACACGAGGTGCTTCTTaGGAAAGGTGGACTTCCCGG +
Preference number: 4 (lower is better)
Translates to: ARLAASGFVLSMATRFPCTRGAS*ERWTSR
Trigger: CCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGT...GCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR GCA 90 bp GTTGAGGGGTTAACTCCCAGCTGTTTCACTGCCACTGTCCGGGTCTCAGGATCTGGGTCAGGGGTCCCCTaGCCAGGACCAGGGCTTGCC +
Preference number: 4 (lower is better)
Translates to: VEGLTPSCFTATVRVSGSGSGVP*PGPGLA
Trigger: GGCAAGCCCTGGTCCTGGGCAGGGGACCCCTGACCC...AGATCCTGAGACCCGGACAGTGGCAGTGAAACAGCTGGGAGTTAACCCCTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR GCA 90 bp GCCACTGTCCGGGTCTCAGGATCTGCGACCAGCTCCACTGAGGATTGGAGGGGTGCTGGGATTCTGGTGTaGGGGTCTCTTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: ATVRVSGSATSSTEDWRGAGILV*GSLPSA
Trigger: TGCGCTGGGAAGAGACCCGCACACCAGAATCCCAGC...ACCCCTCCAATCCTCAGTGGAGCTGGTCGCAGATCCTGAGACCCGGACAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR GCA 90 bp CGCGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGCGCTGGGATTCTGGTGTaGGGGTCTCTTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: RGVWVCVVDGDPFPLLQGAGILV*GSLPSA
Trigger: TGCGCTGGGAAGAGACCCGCACACCAGAATCCCAGC...GCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp CTTGGCCTTGAACTCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTCAAAGCCAGCCACCTTaGCCTGGGGTTTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: LGLELLGWQLPAPDAHLVQSQPP*PGVSPQ
Trigger: CTGGGGTGAAACCCCAGGGCAAGGTGGCTGGCTTTG...AACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGAGTTCAAGGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000636214.1
CDS-3UTR GCA 90 bp CTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAGGCTTCCGGTACAAGCCTaGGTGCGTGGCCACCAGCAC +
Preference number: 4 (lower is better)
Translates to: LAASGFVLSMATRFPCFRLPVQA*VRGHQH
Trigger: GTGCTGGTGGCCACGCACGCAGGCTTGTACCGGAAG...CCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp GGCTGCGTCTCCCACAAAGATGCTGTCCCCGATGGATATGGGCGTGCCGTCGTTGCAGATGGTCCCACATaGCCGTCACCGGCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: GCVSHKDAVPDGYGRAVVADGPT*PSPASG
Trigger: ACCGGAAGCCGGTGACGGGCATGTGGGACCATCTGC...AACGACGGCACGCCCATATCCATCGGGGACAGCATCTTTGTGGGAGACGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp CTCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTGGTGAAGATCACTCGTTGGCCTGCTCCTaGAGATGGTCCCACATGCCC +
Preference number: 4 (lower is better)
Translates to: LLGWQLPAPDAHLVGEDHSLACS*RWSHMP
Trigger: GGGCATGTGGGACCATCTGCAGGAGCAGGCCAACGA...GTGATCTTCACCAACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp GGGCCAGTGGGAAAGACCTTCCCAGAGCGTGTGGTGATGAGCGTCCCGTCCAGACTCGCCCATCCTGGGTaGCGGCCTTCATCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: GPVGKTFPERVVMSVPSRLAHPG*RPSSLL
Trigger: CAAGAGAGATGAAGGCCGGCACCCAGGATGGGCGAG...TCTGGACGGGACGCTCATCACCACACGCTCTGGGAAGGTCTTTCCCACTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636214.1
CDS-3UTR CCA 90 bp AGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCCTCCAGCGCAGGGTCAGTaGGTGGAGGCCATTGACCAA +
Preference number: 4 (lower is better)
Translates to: SLGSTHSRNGISRMAEKPPAQGQ*VEAIDQ
Trigger: TTGGTCAATGGCCTCCACCCACTGACCCTGCGCTGG...AGGCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp TCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTGGTGAAGATCACCAGCCCAGCGCAGGGTCAGTaGGTGGAGGCCATTGACCAA +
Preference number: 4 (lower is better)
Translates to: SAGSFPRPMLIWLVKITSPAQGQ*VEAIDQ
Trigger: TTGGTCAATGGCCTCCACCCACTGACCCTGCGCTGG...GCTGGTGATCTTCACCAACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp TCCGTCATCTCTCGAAACCGGTTGTTGTGGCGCGCCTGCTCCAGAGTGGCGGTGGGCGGAGTATCTGGCTaGGATTCTGGTGTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: SVISRNRLLWRACSRVAVGGVSG*DSGVRV
Trigger: GACCCGCACACCAGAATCCCAGCCAGATACTCCGCC...CACCGCCACTCTGGAGCAGGCGCGCCACAACAACCGGTTTCGAGAGATGACGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp CCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGAGTCACTGGGGCCAGTaGGAAAGACCTTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: PSLGSTHSRNGISRMAEKSHWGQ*ERPSQS
Trigger: GCTCTGGGAAGGTCTTTCCCACTGGCCCCAGTGACT...CTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000600910.5
CDS-3UTR CCA 90 bp TCACACAGCGCTGCCAGGAGCCTAGCGTGTCCCTGTTCACGTGGACATATCCGGGCCTGCTCCTGCAGATaGTCCCACATGCCCGTCACC +
Preference number: 4 (lower is better)
Translates to: SHSAARSLACPCSRGHIRACSCR*SHMPVT
Trigger: GGTGACGGGCATGTGGGACCATCTGCAGGAGCAGGC...CCGGATATGTCCACGTGAACAGGGACACGCTAGGCTCCTGGCAGCGCTGTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp CCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGAGATGCTGTCCCCGATaGATATGGGCGTGCCGTCGT +
Preference number: 4 (lower is better)
Translates to: PSLGSTHSRNGISRMAEKRCCPR*IWACRR
Trigger: ACGACGGCACGCCCATATCCATCGGGGACAGCATCT...CTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp AGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCCTAGAACTCCTCAGGCGTaGCGAAGGGCAGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: SLGSTHSRNGISRMAEKPRTPQA*RRAGQG
Trigger: ACCTTGGCCTGCCCTTCGCCACGCCTGAGGAGTTCT...AGGCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CCA 90 bp AGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCCTCGAAACCGGTTGTTGTaGCGCGCCTGCTCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SLGSTHSRNGISRMAEKPRNRLL*RACSRV
Trigger: CACTCTGGAGCAGGCGCGCCACAACAACCGGTTTCG...AGGCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000593946.5
ENST00000597965.2
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CCA 90 bp CTCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTGGTGAAGATCACCGAAACCGGTTGTTGTaGCGCGCCTGCTCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: LLGWQLPAPDAHLVGEDHRNRLL*RACSRV
Trigger: CACTCTGGAGCAGGCGCGCCACAACAACCGGTTTCG...GTGATCTTCACCAACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GCCCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAACGGGATCTCCAGGATaGCAGAGAAGCCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: APASAPPIAGTGSPGWQRTGSPG*QRSLQP
Trigger: TGGCTGAAGGCTTCTCTGCCATCCTGGAGATCCCGT...TCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000593946.5
ENST00000597965.2
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CCA 90 bp GGCCTGCTCCTGCAGATGGTCCCACATGCCCGTCACCGGCTTCCGGTACAAGCCACGGGATCTCCAGGATaGCAGAGAAGCCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GLLLQMVPHARHRLPVQATGSPG*QRSLQP
Trigger: TGGCTGAAGGCTTCTCTGCCATCCTGGAGATCCCGT...GGCTTGTACCGGAAGCCGGTGACGGGCATGTGGGACCATCTGCAGGAGCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp TCCCCGATGGATATGGGCGTGCCGTCGTTGGCCTGCTCCTGCAGATGGTCCCACAAACAGCGTTTATTGTaGAGGGGAGCTGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SPMDMGVPSLACSCRWSHKQRLL*RGAGRG
Trigger: GCCCCGCCCAGCTCCCCTCCACAATAAACGCTGTTT...GTGGGACCATCTGCAGGAGCAGGCCAACGACGGCACGCCCATATCCATCGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp CTCCTGCAGATGGTCCCACATGCCCGTCACCGGCTTCCGGTACAAGCCTGCGTGAAACAGCGTTTATTGTaGAGGGGAGCTGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: LLQMVPHARHRLPVQACVKQRLL*RGAGRG
Trigger: GCCCCGCCCAGCTCCCCTCCACAATAAACGCTGTTT...CACGCAGGCTTGTACCGGAAGCCGGTGACGGGCATGTGGGACCATCTGCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp CCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCGTACCCTGTTCACGTaGACATATCCGGCCGACACG +
Preference number: 4 (lower is better)
Translates to: PSLGSTHSRNGISRMAEKRTLFT*TYPADT
Trigger: CGTGTCGGCCGGATATGTCCACGTGAACAGGGTACG...CTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600910.5
3UTR CAA 72 bp TCAAAGGCTGGGAGCTCGAAGCCGGCTGCTGGCCACTaGAGAAAGAACTCCTCAGGCGTGGCGAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SKAGSSKPAAGH*RKNSSGVAKGR
Trigger: CCTGCCCTTCGCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTCCCAGCCTTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
3UTR CAA 72 bp ACTGGACGTACCTGGCGCGGCTCGCGGCGTCTGGGTTaGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: TGRTWRGSRRLG*CCRWRPVSLAS
Trigger: TGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTACGTCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR TCA 90 bp CTCCAGTCACTGGGGCCAGTGGGAAAGACCTTCCCAGAGCGTGTGGTGATGAGCGCGACCAGCTCCACTTaGGTTCTGGAGCACTTCCGG +
Preference number: 4 (lower is better)
Translates to: LQSLGPVGKTFPERVVMSATSST*VLEHFR
Trigger: CCGGAAGTGCTCCAGAACTCAAGTGGAGCTGGTCGC...GCTCATCACCACACGCTCTGGGAAGGTCTTTCCCACTGGCCCCAGTGACTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636214.1
CDS-3UTR TCA 90 bp TCTCGAAACCGGTTGTTGTGGCGCGCCTGCTCCAGAGTGGCGGTGAAGAGGAAGCTGGGTCCCGGTAGTTaGGGGGTTAACTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SRNRLLWRACSRVAVKRKLGPGS*GVNSQL
Trigger: CAGCTGGGAGTTAACCCCTCAACTACCGGGACCCAG...CTTCCTCTTCACCGCCACTCTGGAGCAGGCGCGCCACAACAACCGGTTTCGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR TCA 90 bp CCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCGTGGGTGGAGGCCATTaGCCAAATACAGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: PASAPPIAGTGSPGWQRSVGGGH*PNTVCP
Trigger: GGGACACACTGTATTTGGTCAATGGCCTCCACCCAC...GCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR TCA 90 bp TCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTGGTGAAGATCACCCTCCCAGCCGGGGTTTaGCTTCCGCATACGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SSAGSFPRPMLIWLVKITLPAGV*LPHTLL
Trigger: AAGAAGCGTATGCGGAAGTCAAACCCCGGCTGGGAG...GGTGATCTTCACCAACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000627232.2
ENST00000636214.1
CDS-3UTR TCA 90 bp CATCTCTCGAAACCGGTTGTTGTGGCGCGCCTGCTCCAGAGTGGCGGTGAAGAGCGGCTGCTGGCCACTTaGGAAAGAACTCCTCAGGCG +
Preference number: 4 (lower is better)
Translates to: HLSKPVVVARLLQSGGEERLLAT*ERTPQA
Trigger: CGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCG...CTCTTCACCGCCACTCTGGAGCAGGCGCGCCACAACAACCGGTTTCGAGAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR TCA 90 bp CCGGTTGTTGTGGCGCGCCTGCTCCAGAGTGGCGGTGAAGAGGAAGCAGCGGCATCTGACACGGGGATATaGGAGGAGTCCGTCATCTCT +
Preference number: 4 (lower is better)
Translates to: PVVVARLLQSGGEEEAAASDTGI*EESVIS
Trigger: AGAGATGACGGACTCCTCTCATATCCCCGTGTCAGA...TGCCGCTGCTTCCTCTTCACCGCCACTCTGGAGCAGGCGCGCCACAACAACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR TCA 90 bp AGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCCTCAGTGGTGGGAACAGTaGGGGACAGCCTGGATCATG +
Preference number: 4 (lower is better)
Translates to: SLGSTHSRNGISRMAEKPQWWEQ*GTAWIM
Trigger: CATGATCCAGGCTGTCCCTCACTGTTCCCACCACTG...AGGCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597965.2
CDS-3UTR GCA 90 bp CTCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTGGTGAAGATCACTCCCAGCTGTTTCACTaGCACTGTCCGGGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLGWQLPAPDAHLVGEDHSQLFH*HCPGLR
Trigger: CCTGAGACCCGGACAGTGGCAGTGAAACAGCTGGGA...GTGATCTTCACCAACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp GCGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGCTGCTGGGATTCTGGTGTaGGGGTCTCTTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: AASGFVLSMATRFPCFRAAGILV*GSLPSA
Trigger: TGCGCTGGGAAGAGACCCGCACACCAGAATCCCAGC...AGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp GCTGGCCACTTGAGAAAGAACTCCTCAGGCGTGGCGAAGGGCAGGCCAAGGTTGTCGTTGGCCTGCTCCTaGAGATGGTCCCACATGCCC +
Preference number: 4 (lower is better)
Translates to: AGHLRKNSSGVAKGRPRLSLACS*RWSHMP
Trigger: GGGCATGTGGGACCATCTGCAGGAGCAGGCCAACGA...CAACCTTGGCCTGCCCTTCGCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp CGCAGGGTCAGTGGGTGGAGGCCATTGACCAAATACAGTGTGTCCCCCACCCCCGCGACCCGTTTCCCTTaGTTCAGGGCTGTCTCACAC +
Preference number: 4 (lower is better)
Translates to: RRVSGWRPLTKYSVSPTPATRFP*FRAVSH
Trigger: GTGTGAGACAGCCCTGAAGCAAGGGAAACGGGTCGC...GGGGGTGGGGGACACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR GCA 90 bp GGCTGCTGGCCACTTGAGAAAGAACTCCTCAGGCGTGGCGAAGGGCAGGCCAAGGCGACCCGTTTCCCTTaGTTCAGGGCTGTCTCACAC +
Preference number: 4 (lower is better)
Translates to: GCWPLEKELLRRGEGQAKATRFP*FRAVSH
Trigger: GTGTGAGACAGCCCTGAAGCAAGGGAAACGGGTCGC...CTTGGCCTGCCCTTCGCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp AAAGGTGGACTTCCCGGCCCCAGGGAATCCCACTGCGACAACCACCTCCGGGCTTGGGTACAAGATCCTTaGCCTGGGGTTTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: KGGLPGPRESHCDNHLRAWVQDP*PGVSPQ
Trigger: CTGGGGTGAAACCCCAGGGCAAGGATCTTGTACCCA...AGCCCGGAGGTGGTTGTCGCAGTGGGATTCCCTGGGGCCGGGAAGTCCACCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000627232.2
CDS-3UTR CCA 90 bp AACCCCGGCTTCAACTCCTGGGTCCCGGTAGTTGAGGGGTTAACTCCCAGCTGTCCCGGCTTCAACTCCTaGGTCCCGGTAGTTGAGGGG +
Preference number: 4 (lower is better)
Translates to: NPGFNSWVPVVEGLTPSCPGFNS*VPVVEG
Trigger: CCCCTCAACTACCGGGACCCAGGAGTTGAAGCCGGG...ACAGCTGGGAGTTAACCCCTCAACTACCGGGACCCAGGAGTTGAAGCCGGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR CCA 90 bp CTCCTGCAGATGGTCCCACATGCCCGTCACCGGCTTCCGGTACAAGCCTGCGTGCGCAGGGTCAGTGGGTaGAGGCCATTGACCAAATAC +
Preference number: 4 (lower is better)
Translates to: LLQMVPHARHRLPVQACVRRVSG*RPLTKY
Trigger: GTATTTGGTCAATGGCCTCCACCCACTGACCCTGCG...CACGCAGGCTTGTACCGGAAGCCGGTGACGGGCATGTGGGACCATCTGCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp CAGCGCAGGGTCAGTGGGTGGAGGCCATTGACCAAATACAGTGTGTCCCCCACCCCAGCGCAGGGTCAGTaGGTGGAGGCCATTGACCAA +
Preference number: 4 (lower is better)
Translates to: QRRVSGWRPLTKYSVSPTPAQGQ*VEAIDQ
Trigger: TTGGTCAATGGCCTCCACCCACTGACCCTGCGCTGG...GGTGGGGGACACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR CCA 90 bp ACCTTGGCCTTGAACTCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGATCTGGCTGGGATTCTaGTGTGCGGGTCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: TLALNSSAGSFPRPMLIWIWLGF*CAGLFP
Trigger: TGGGAAGAGACCCGCACACCAGAATCCCAGCCAGAT...CCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGAGTTCAAGGCCAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp AGATGCTGTCCCCGATGGATATGGGCGTGCCGTCGTTGGCCTGCTCCTGCAGATGGCGGAGTATCTGGCTaGGATTCTGGTGTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: RCCPRWIWACRRWPAPADGGVSG*DSGVRV
Trigger: GACCCGCACACCAGAATCCCAGCCAGATACTCCGCC...ATCTGCAGGAGCAGGCCAACGACGGCACGCCCATATCCATCGGGGACAGCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GCCCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGATCTCTCTTCTCATCTTaGGACACCAGAGGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: APASAPPIAGTGSPGWQRSLFSS*DTRGVP
Trigger: TGGCACCCCTCTGGTGTCCCAAGATGAGAAGAGAGA...TCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CCA 90 bp CTTCCCAGAGCGTGTGGTGATGAGCGTCCCGTCCAGATCAAAGCCAGCCACCTTACAAGCCTGCGTGCGTaGCCACCAGCACCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPRACGDERPVQIKASHLTSLRA*PPAPGR
Trigger: CCTTCCAGGTGCTGGTGGCCACGCACGCAGGCTTGT...AAGGTGGCTGGCTTTGATCTGGACGGGACGCTCATCACCACACGCTCTGGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000636214.1
CDS-3UTR CCA 90 bp GATCCTCCAGTCACTGGGGCCAGTGGGAAAGACCTTCCCAGAGCGTGTGGTGATACAAGCCTGCGTGCGTaGCCACCAGCACCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: DPPVTGASGKDLPRACGDTSLRA*PPAPGR
Trigger: CCTTCCAGGTGCTGGTGGCCACGCACGCAGGCTTGT...ATCACCACACGCTCTGGGAAGGTCTTTCCCACTGGCCCCAGTGACTGGAGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000636214.1
CDS-3UTR CCA 90 bp CGCAGGGTCAGTGGGTGGAGGCCATTGACCAAATACAGTGTGTCCCCCACCCCCAGATGCTGTCCCCGATaGATATGGGCGTGCCGTCGT +
Preference number: 4 (lower is better)
Translates to: RRVSGWRPLTKYSVSPTPRCCPR*IWACRR
Trigger: ACGACGGCACGCCCATATCCATCGGGGACAGCATCT...GGGGGTGGGGGACACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR CCA 90 bp CATCTCTCGAAACCGGTTGTTGTGGCGCGCCTGCTCCAGAGTGGCGGTGAAGAGAGAACTCCTCAGGCGTaGCGAAGGGCAGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: HLSKPVVVARLLQSGGEERTPQA*RRAGQG
Trigger: ACCTTGGCCTGCCCTTCGCCACGCCTGAGGAGTTCT...CTCTTCACCGCCACTCTGGAGCAGGCGCGCCACAACAACCGGTTTCGAGAGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CCA 90 bp CCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCTCGAAGCCGGCTGCTaGCCACTTGAGAAAGAACTC +
Preference number: 4 (lower is better)
Translates to: PSLGSTHSRNGISRMAEKLEAGC*PLEKEL
Trigger: GAGTTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAG...CTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CCA 90 bp CCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCCTCGAAGCCGGCTGCTaGCCACTTGAGAAAGAACTC +
Preference number: 4 (lower is better)
Translates to: PASAPPIAGTGSPGWQRSLEAGC*PLEKEL
Trigger: GAGTTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAG...GCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CCA 90 bp GCCCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAGGTTTGTGTTGTCGATaGCGACCCGTTTCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: APASAPPIAGTGSPGWQRGLCCR*RPVSLA
Trigger: AGCAAGGGAAACGGGTCGCCATCGACAACACAAACC...TCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CCA 90 bp CCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCACGGGATCTCCAGGATaGCAGAGAAGCCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PASAPPIAGTGSPGWQRSTGSPG*QRSLQP
Trigger: TGGCTGAAGGCTTCTCTGCCATCCTGGAGATCCCGT...GCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000593946.5
ENST00000597965.2
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
3UTR CAA 72 bp GTCTCTTCCCAGCGCAGGGTCAGTGGGTGGAGGCCATaGACCAAATACAGTGTGTCCCCCACCCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: VSSQRRVSGWRP*TKYSVSPTPRE
Trigger: CTCTCTGGGGGTGGGGGACACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCGCTGGGAAGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR TCA 90 bp TCACACAGCGCTGCCAGGAGCCTAGCGTGTCCCTGTTCACGTGGACATATCCGGCTCCCAGCCGGGGTTTaGCTTCCGCATACGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SHSAARSLACPCSRGHIRLPAGV*LPHTLL
Trigger: AAGAAGCGTATGCGGAAGTCAAACCCCGGCTGGGAG...CCGGATATGTCCACGTGAACAGGGACACGCTAGGCTCCTGGCAGCGCTGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR TCA 90 bp CTTGGCCTTGAACTCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTTCACCCCAGCTGCGGTaGACACTAGCAACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LGLELLGWQLPAPDAHLVSPQLR*TLATSP
Trigger: TGGAGAAGTTGCTAGTGTTCACCGCAGCTGGGGTGA...AACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGAGTTCAAGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000627232.2
ENST00000636214.1
CDS-3UTR TCA 90 bp CCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGACCTGTAGCCATACATaGCCATGTCTGACACGGGGA +
Preference number: 4 (lower is better)
Translates to: PSLGSTHSRNGISRMAEKTCSHT*PCLTRG
Trigger: TCCCCGTGTCAGACATGGTCATGTATGGCTACAGGT...CTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597965.2
CDS-3UTR GCA 90 bp GCTGGCCACTTGAGAAAGAACTCCTCAGGCGTGGCGAAGGGCAGGCCAAGGTTGCCGGGTCTCAGGATCTaGGACCAGCTCCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: AGHLRKNSSGVAKGRPRLPGLRI*DQLHLS
Trigger: ACTCAAGTGGAGCTGGTCGCAGATCCTGAGACCCGG...CAACCTTGGCCTGCCCTTCGCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627232.2
CDS-3UTR GCA 90 bp GAGTCCGTCATCTCTCGAAACCGGTTGTTGTGGCGCGCCTGCTCCAGAGTGGCGGAGCTCGAAGCCGGCTaGTGGCCACTTGAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: ESVISRNRLLWRACSRVAELEAG*WPLEKE
Trigger: TTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTC...CGCCACTCTGGAGCAGGCGCGCCACAACAACCGGTTTCGAGAGATGACGGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR GCA 90 bp GCGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGCTCCGGCCGACACGAGGTaGTTCTTGAGAAAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: AASGFVLSMATRFPCFRAPADTR*FLRKVD
Trigger: GTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGG...AGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR GCA 90 bp GGAAAGACCTTCCCAGAGCGTGTGGTGATGAGCGTCCCGTCCAGATCAAAGCCAGTGGTCACACAGCGCTaGCAGGAGCCTAGCGTGTCC +
Preference number: 4 (lower is better)
Translates to: GKTFPERVVMSVPSRSKPVVTQR*QEPSVS
Trigger: GGACACGCTAGGCTCCTGGCAGCGCTGTGTGACCAC...TGGCTTTGATCTGGACGGGACGCTCATCACCACACGCTCTGGGAAGGTCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR CCA 90 bp GATGAGCGTCCCGTCCAGATCAAAGCCAGCCACCTTGCCCTGGGGTTTCACCCCAGATCCTCCAGTCACTaGGGCCAGTGGGAAAGACCT +
Preference number: 4 (lower is better)
Translates to: DERPVQIKASHLALGFHPRSSSH*GQWERP
Trigger: AGGTCTTTCCCACTGGCCCCAGTGACTGGAGGATCT...GGGGTGAAACCCCAGGGCAAGGTGGCTGGCTTTGATCTGGACGGGACGCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000636214.1
CDS-3UTR CCA 90 bp CTCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTGGTGAAGATCACCGCCCGATGCTCATCTaGTTGGTGAAGATCACCAGC +
Preference number: 4 (lower is better)
Translates to: LLGWQLPAPDAHLVGEDHRPMLI*LVKITS
Trigger: GCTGGTGATCTTCACCAACCAGATGAGCATCGGGCG...GTGATCTTCACCAACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000627232.2
ENST00000636214.1
CDS-3UTR CCA 90 bp GGAAAGACCTTCCCAGAGCGTGTGGTGATGAGCGTCCCGTCCAGATCAAAGCCACTTGAACTCCTCGGCTaGCAGCTTCCCGCGCCCGAT +
Preference number: 4 (lower is better)
Translates to: GKTFPERVVMSVPSRSKPLELLG*QLPAPD
Trigger: ATCGGGCGCGGGAAGCTGCCAGCCGAGGAGTTCAAG...TGGCTTTGATCTGGACGGGACGCTCATCACCACACGCTCTGGGAAGGTCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000636214.1
CDS-3UTR CCA 90 bp CCCAGCCGGGGTTTGACTTCCGCATACGCTTCTTCGGCAGCTCAGCATCTCTCTTGTCCCCGATGGATATaGGCGTGCCGTCGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PSRGLTSAYASSAAQHLSCPRWI*ACRRWP
Trigger: AGGCCAACGACGGCACGCCCATATCCATCGGGGACA...AGAGAGATGCTGAGCTGCCGAAGAAGCGTATGCGGAAGTCAAACCCCGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR CCA 90 bp AAGAACTCCTCAGGCGTGGCGAAGGGCAGGCCAAGGTTGAGGGCAAACAGGCGAAGATGCTGTCCCCGATaGATATGGGCGTGCCGTCGT +
Preference number: 4 (lower is better)
Translates to: KNSSGVAKGRPRLRANRRRCCPR*IWACRR
Trigger: ACGACGGCACGCCCATATCCATCGGGGACAGCATCT...TCGCCTGTTTGCCCTCAACCTTGGCCTGCCCTTCGCCACGCCTGAGGAGTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp TCAAAGGCTGGGAGCTCGAAGCCGGCTGCTGGCCACTTGAGAAAGAACTCCTCAGGGCTGTCTCACACGTaGTCACACAGCGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SKAGSSKPAAGHLRKNSSGLSHT*SHSAAR
Trigger: CCTGGCAGCGCTGTGTGACCACGTGTGAGACAGCCC...TGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTCCCAGCCTTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp TGTCCCCGATGGATATGGGCGTGCCGTCGTTGGCCTGCTCCTGCAGATGGTCCCGGTTTGTGTTGTCGATaGCGACCCGTTTCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: CPRWIWACRRWPAPADGPGLCCR*RPVSLA
Trigger: AGCAAGGGAAACGGGTCGCCATCGACAACACAAACC...GGGACCATCTGCAGGAGCAGGCCAACGACGGCACGCCCATATCCATCGGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp TCCGTCATCTCTCGAAACCGGTTGTTGTGGCGCGCCTGCTCCAGAGTGGCGGTGACGGGATCTCCAGGATaGCAGAGAAGCCTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SVISRNRLLWRACSRVAVTGSPG*QRSLQP
Trigger: TGGCTGAAGGCTTCTCTGCCATCCTGGAGATCCCGT...CACCGCCACTCTGGAGCAGGCGCGCCACAACAACCGGTTTCGAGAGATGACGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
3UTR CAA 72 bp TTCACGTGGACATATCCGGCCGACACGAGGTGCTTCTaGAGAAAGGTGGACTTCCCGGCCCCAGGGAATCCC +
Preference number: 4 (lower is better)
Translates to: FTWTYPADTRCF*RKVDFPAPGNP
Trigger: GGGATTCCCTGGGGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGGATATGTCCACGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR TCA 90 bp TCACACAGCGCTGCCAGGAGCCTAGCGTGTCCCTGTTCACGTGGACATATCCGGGTGGGTGGAGGCCATTaGCCAAATACAGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: SHSAARSLACPCSRGHIRVGGGH*PNTVCP
Trigger: GGGACACACTGTATTTGGTCAATGGCCTCCACCCAC...CCGGATATGTCCACGTGAACAGGGACACGCTAGGCTCCTGGCAGCGCTGTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR TCA 90 bp GCGCCCGATGCTCATCTGGTTGGTGAAGATCACCAGCTTGTAGCCCTCGGCTTCCTCCCAGCCGGGGTTTaGCTTCCGCATACGCTTCTT +
Preference number: 4 (lower is better)
Translates to: APDAHLVGEDHQLVALGFLPAGV*LPHTLL
Trigger: AAGAAGCGTATGCGGAAGTCAAACCCCGGCTGGGAG...GAAGCCGAGGGCTACAAGCTGGTGATCTTCACCAACCAGATGAGCATCGGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000627232.2
ENST00000636214.1
CDS-3UTR TCA 90 bp CGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGCTGTCACCCCAGCTGCGGTaGACACTAGCAACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RRLGLCCRWRPVSLASGLSPQLR*TLATSP
Trigger: TGGAGAAGTTGCTAGTGTTCACCGCAGCTGGGGTGA...CAGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR TCA 90 bp GGCAAACAGGCGATCGGCGCAGGAGAAGTCTTTCTTCTTCCGCCCCGGGGCCCATGCTCATCTGGTTGGTaGAGATCACCAGCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: GKQAIGAGEVFLLPPRGPCSSGW*RSPACS
Trigger: GCTACAAGCTGGTGATCTTCACCAACCAGATGAGCA...TGGGCCCCGGGGCGGAAGAAGAAAGACTTCTCCTGCGCCGATCGCCTGTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR TCA 90 bp AGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCCTTCTGACACGGGGATATaGGAGGAGTCCGTCATCTCT +
Preference number: 4 (lower is better)
Translates to: SLGSTHSRNGISRMAEKPSDTGI*EESVIS
Trigger: AGAGATGACGGACTCCTCTCATATCCCCGTGTCAGA...AGGCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000593946.5
ENST00000597965.2
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR TCA 90 bp GCCCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAATACATGACCATGTCTaGCACGGGGATATGAGAGGA +
Preference number: 4 (lower is better)
Translates to: APASAPPIAGTGSPGWQRIHDHV*HGDMRG
Trigger: TCCTCTCATATCCCCGTGTCAGACATGGTCATGTAT...TCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000593946.5
ENST00000597965.2
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR TCA 90 bp CGGCTGCGTCTCCCACAAAGATGCTGTCCCCGATGGATATGGGCGTGCCGTCGTTCCTGTAGCCATACATaGCCATGTCTGACACGGGGA +
Preference number: 4 (lower is better)
Translates to: RLRLPQRCCPRWIWACRRSCSHT*PCLTRG
Trigger: TCCCCGTGTCAGACATGGTCATGTATGGCTACAGGA...ACGACGGCACGCCCATATCCATCGGGGACAGCATCTTTGTGGGAGACGCAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp GCTTGTAGCCCTCGGCTTCCAGCTCTCGGAGCTTACGGGGAATCTCTGGGTACACCGGGTCTCAGGATCTaGGACCAGCTCCACTTGAGT +
Preference number: 4 (lower is better)
Translates to: ACSPRLPALGAYGESLGTPGLRI*DQLHLS
Trigger: ACTCAAGTGGAGCTGGTCGCAGATCCTGAGACCCGG...TGTACCCAGAGATTCCCCGTAAGCTCCGAGAGCTGGAAGCCGAGGGCTACAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636214.1
CDS-3UTR GCA 90 bp GAGGGGTTAACTCCCAGCTGTTTCACTGCCACTGTCCGGGTCTCAGGATCTGCGTCCCAGCTGTTTCACTaGCACTGTCCGGGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: EGLTPSCFTATVRVSGSASQLFH*HCPGLR
Trigger: CCTGAGACCCGGACAGTGGCAGTGAAACAGCTGGGA...CGCAGATCCTGAGACCCGGACAGTGGCAGTGAAACAGCTGGGAGTTAACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR GCA 90 bp TCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGCTGTCTCAGTGCCGTCGTTGGCCTaGTCCTGCAGATGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SGFVLSMATRFPCFRAVSVPSLA*SCRWSH
Trigger: GTGGGACCATCTGCAGGAGCAGGCCAACGACGGCAC...TGAGACAGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR GCA 90 bp ACTGGGGCCAGTGGGAAAGACCTTCCCAGAGCGTGTGGTGATGAGCGTCCCGTCCGTCTCCCACAAAGATaGTGTCCCCGATGGATATGG +
Preference number: 4 (lower is better)
Translates to: TGASGKDLPRACGDERPVRLPQR*CPRWIW
Trigger: CCATATCCATCGGGGACAGCATCTTTGTGGGAGACG...GACGGGACGCTCATCACCACACGCTCTGGGAAGGTCTTTCCCACTGGCCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR GCA 90 bp AGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCCTCGTCTCCCACAAAGATaGTGTCCCCGATGGATATGG +
Preference number: 4 (lower is better)
Translates to: SLGSTHSRNGISRMAEKPRLPQR*CPRWIW
Trigger: CCATATCCATCGGGGACAGCATCTTTGTGGGAGACG...AGGCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR GCA 90 bp CCTCCAGTCACTGGGGCCAGTGGGAAAGACCTTCCCAGAGCGTGTGGTGATGAGGAGCTCGAAGCCGGCTaGTGGCCACTTGAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: PPVTGASGKDLPRACGDEELEAG*WPLEKE
Trigger: TTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTC...CTCATCACCACACGCTCTGGGAAGGTCTTTCCCACTGGCCCCAGTGACTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR GCA 90 bp GCGCCCGATGCTCATCTGGTTGGTGAAGATCACCAGCTTGTAGCCCTCGGCTTCCTTCATCTCTCTTGCTaGAACGCGAGGCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: APDAHLVGEDHQLVALGFLHLSC*NARLRP
Trigger: CGGCCTGAGCCTCGCGTTGCAGCAAGAGAGATGAAG...GAAGCCGAGGGCTACAAGCTGGTGATCTTCACCAACCAGATGAGCATCGGGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636214.1
CDS-3UTR GCA 90 bp ATCCTCCAGTCACTGGGGCCAGTGGGAAAGACCTTCCCAGAGCGTGTGGTGATGGGCCTTCATCTCTCTTaGTGCAACGCGAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: ILQSLGPVGKTFPERVVMGLHLS*CNARLR
Trigger: CCTGAGCCTCGCGTTGCAGCAAGAGAGATGAAGGCC...CATCACCACACGCTCTGGGAAGGTCTTTCCCACTGGCCCCAGTGACTGGAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636214.1
CDS-3UTR GCA 90 bp GAGGGGTTAACTCCCAGCTGTTTCACTGCCACTGTCCGGGTCTCAGGATCTGCGCTGGGGAGTGTGGCCTaGTTCAGGCTTGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: EGLTPSCFTATVRVSGSALGSVA*FRLEFW
Trigger: CCAGAACTCAAGCCTGAAGCAGGCCACACTCCCCAG...CGCAGATCCTGAGACCCGGACAGTGGCAGTGAAACAGCTGGGAGTTAACCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR CCA 90 bp GGTCTCTTCCCAGCGCAGGGTCAGTGGGTGGAGGCCATTGACCAAATACAGTGTCCAGCGCAGGGTCAGTaGGTGGAGGCCATTGACCAA +
Preference number: 4 (lower is better)
Translates to: GLFPAQGQWVEAIDQIQCPAQGQ*VEAIDQ
Trigger: TTGGTCAATGGCCTCCACCCACTGACCCTGCGCTGG...ACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCGCTGGGAAGAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR CCA 90 bp TCCGGGTCTCAGGATCTGCGACCAGCTCCACTGAGGATTGGAGGGGTGGAGTCAATCTGGCTGGGATTCTaGTGTGCGGGTCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SGSQDLRPAPLRIGGVESIWLGF*CAGLFP
Trigger: TGGGAAGAGACCCGCACACCAGAATCCCAGCCAGAT...TGACTCCACCCCTCCAATCCTCAGTGGAGCTGGTCGCAGATCCTGAGACCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR CCA 90 bp GGTCTCTTCCCAGCGCAGGGTCAGTGGGTGGAGGCCATTGACCAAATACAGTGTGGCGGAGTATCTGGCTaGGATTCTGGTGTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: GLFPAQGQWVEAIDQIQCGGVSG*DSGVRV
Trigger: GACCCGCACACCAGAATCCCAGCCAGATACTCCGCC...ACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCGCTGGGAAGAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR CCA 90 bp GCGCCCGATGCTCATCTGGTTGGTGAAGATCACCAGCTTGTAGCCCTCGGCTTCAGTCACTGGGGCCAGTaGGAAAGACCTTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: APDAHLVGEDHQLVALGFSHWGQ*ERPSQS
Trigger: GCTCTGGGAAGGTCTTTCCCACTGGCCCCAGTGACT...GAAGCCGAGGGCTACAAGCTGGTGATCTTCACCAACCAGATGAGCATCGGGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000636214.1
CDS-3UTR CCA 90 bp GGCTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCACGCCCGATGCTCATCTaGTTGGTGAAGATCACCAGC +
Preference number: 4 (lower is better)
Translates to: GSRRLGLCCRWRPVSLASRPMLI*LVKITS
Trigger: GCTGGTGATCTTCACCAACCAGATGAGCATCGGGCG...TGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp TCACACAGCGCTGCCAGGAGCCTAGCGTGTCCCTGTTCACGTGGACATATCCGGCTCGAAGCCGGCTGCTaGCCACTTGAGAAAGAACTC +
Preference number: 4 (lower is better)
Translates to: SHSAARSLACPCSRGHIRLEAGC*PLEKEL
Trigger: GAGTTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAG...CCGGATATGTCCACGTGAACAGGGACACGCTAGGCTCCTGGCAGCGCTGTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GACACGAGGTGCTTCTTGAGAAAGGTGGACTTCCCGGCCCCAGGGAATCCCACTGTGTCCCTGTTCACGTaGACATATCCGGCCGACACG +
Preference number: 4 (lower is better)
Translates to: DTRCFLRKVDFPAPGNPTVSLFT*TYPADT
Trigger: CGTGTCGGCCGGATATGTCCACGTGAACAGGGACAC...AGTGGGATTCCCTGGGGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp GTGGTCACACAGCGCTGCCAGGAGCCTAGCGTGTCCCTGTTCACGTGGACATATGTGTCCCTGTTCACGTaGACATATCCGGCCGACACG +
Preference number: 4 (lower is better)
Translates to: VVTQRCQEPSVSLFTWTYVSLFT*TYPADT
Trigger: CGTGTCGGCCGGATATGTCCACGTGAACAGGGACAC...ATATGTCCACGTGAACAGGGACACGCTAGGCTCCTGGCAGCGCTGTGTGACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp TCCGGGTCTCAGGATCTGCGACCAGCTCCACTGAGGATTGGAGGGGTGGAGTCATGGGTCCCTCATTTCTaGGGAGTGTGGCCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SGSQDLRPAPLRIGGVESWVPHF*GVWPAS
Trigger: TGAAGCAGGCCACACTCCCCAGAAATGAGGGACCCA...TGACTCCACCCCTCCAATCCTCAGTGGAGCTGGTCGCAGATCCTGAGACCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR CCA 90 bp GCCACTGTCCGGGTCTCAGGATCTGCGACCAGCTCCACTGAGGATTGGAGGGGTAGCTCCACTGAGGATTaGAGGGGTGGAGTCAGGATT +
Preference number: 4 (lower is better)
Translates to: ATVRVSGSATSSTEDWRGSSTED*RGGVRI
Trigger: AATCCTGACTCCACCCCTCCAATCCTCAGTGGAGCT...ACCCCTCCAATCCTCAGTGGAGCTGGTCGCAGATCCTGAGACCCGGACAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR TCA 90 bp GCGCCCGATGCTCATCTGGTTGGTGAAGATCACCAGCTTGTAGCCCTCGGCTTCTCACCCCAGCTGCGGTaGACACTAGCAACTTCTCCA +
Preference number: 4 (lower is better)
Translates to: APDAHLVGEDHQLVALGFSPQLR*TLATSP
Trigger: TGGAGAAGTTGCTAGTGTTCACCGCAGCTGGGGTGA...GAAGCCGAGGGCTACAAGCTGGTGATCTTCACCAACCAGATGAGCATCGGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000627232.2
ENST00000636214.1
CDS-3UTR TCA 90 bp TCACACAGCGCTGCCAGGAGCCTAGCGTGTCCCTGTTCACGTGGACATATCCGGTCTGACACGGGGATATaGGAGGAGTCCGTCATCTCT +
Preference number: 4 (lower is better)
Translates to: SHSAARSLACPCSRGHIRSDTGI*EESVIS
Trigger: AGAGATGACGGACTCCTCTCATATCCCCGTGTCAGA...CCGGATATGTCCACGTGAACAGGGACACGCTAGGCTCCTGGCAGCGCTGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR TCA 90 bp GCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTGGTGAAGATCACCAGCTTGTCTGACACGGGGATATaGGAGGAGTCCGTCATCTCT +
Preference number: 4 (lower is better)
Translates to: AGSFPRPMLIWLVKITSLSDTGI*EESVIS
Trigger: AGAGATGACGGACTCCTCTCATATCCCCGTGTCAGA...CAAGCTGGTGATCTTCACCAACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR TCA 90 bp CCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCATACATGACCATGTCTaGCACGGGGATATGAGAGGA +
Preference number: 4 (lower is better)
Translates to: PASAPPIAGTGSPGWQRSIHDHV*HGDMRG
Trigger: TCCTCTCATATCCCCGTGTCAGACATGGTCATGTAT...GCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000593946.5
ENST00000597965.2
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR TCA 90 bp ACCTTCCCAGAGCGTGTGGTGATGAGCGTCCCGTCCAGATCAAAGCCAGCCACCTCCTGTAGCCATACATaGCCATGTCTGACACGGGGA +
Preference number: 4 (lower is better)
Translates to: TFPERVVMSVPSRSKPATSCSHT*PCLTRG
Trigger: TCCCCGTGTCAGACATGGTCATGTATGGCTACAGGA...GGTGGCTGGCTTTGATCTGGACGGGACGCTCATCACCACACGCTCTGGGAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR TCA 90 bp GCTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAGTCCTGTAGCCATACATaGCCATGTCTGACACGGGGA +
Preference number: 4 (lower is better)
Translates to: ARGVWVCVVDGDPFPLLQSCSHT*PCLTRG
Trigger: TCCCCGTGTCAGACATGGTCATGTATGGCTACAGGA...CTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR GCA 90 bp TCTCGAAACCGGTTGTTGTGGCGCGCCTGCTCCAGAGTGGCGGTGAAGAGGAAGCGTCTCCCACAAAGATaGTGTCCCCGATGGATATGG +
Preference number: 4 (lower is better)
Translates to: SRNRLLWRACSRVAVKRKRLPQR*CPRWIW
Trigger: CCATATCCATCGGGGACAGCATCTTTGTGGGAGACG...CTTCCTCTTCACCGCCACTCTGGAGCAGGCGCGCCACAACAACCGGTTTCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR GCA 90 bp CCTCCAGTCACTGGGGCCAGTGGGAAAGACCTTCCCAGAGCGTGTGGTGATGAGTCTCATCTGTTTCACTaGCACTGTCCGGGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PPVTGASGKDLPRACGDESHLFH*HCPGLR
Trigger: CCTGAGACCCGGACAGTGGCAGTGAAACAGATGAGA...CTCATCACCACACGCTCTGGGAAGGTCTTTCCCACTGGCCCCAGTGACTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636214.1
CDS-3UTR CCA 90 bp CTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAGGTCTCTCTTCTCATCTTaGGACACCAGAGGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LAASGFVLSMATRFPCFRSLFSS*DTRGVP
Trigger: TGGCACCCCTCTGGTGTCCCAAGATGAGAAGAGAGA...CCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp AACTCCCAGCTGTTTCACTGCCACTGTCCGGGTCTCAGGATCTGCGACCAGCTCAGATCCTCCAGTCACTaGGGCCAGTGGGAAAGACCT +
Preference number: 4 (lower is better)
Translates to: NSQLFHCHCPGLRICDQLRSSSH*GQWERP
Trigger: AGGTCTTTCCCACTGGCCCCAGTGACTGGAGGATCT...GAGCTGGTCGCAGATCCTGAGACCCGGACAGTGGCAGTGAAACAGCTGGGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR CCA 90 bp ATCCTCCAGTCACTGGGGCCAGTGGGAAAGACCTTCCCAGAGCGTGTGGTGATGCGCCCGATGCTCATCTaGTTGGTGAAGATCACCAGC +
Preference number: 4 (lower is better)
Translates to: ILQSLGPVGKTFPERVVMRPMLI*LVKITS
Trigger: GCTGGTGATCTTCACCAACCAGATGAGCATCGGGCG...CATCACCACACGCTCTGGGAAGGTCTTTCCCACTGGCCCCAGTGACTGGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000636214.1
CDS-3UTR CCA 90 bp CTGACACGGGGATATGAGAGGAGTCCGTCATCTCTCGAAACCGGTTGTTGTGGCTGTCCCCGATGGATATaGGCGTGCCGTCGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LTRGYERSPSSLETGCCGCPRWI*ACRRWP
Trigger: AGGCCAACGACGGCACGCCCATATCCATCGGGGACA...GCCACAACAACCGGTTTCGAGAGATGACGGACTCCTCTCATATCCCCGTGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp TGGAGTCAGGATTTGCATCCTTGTGTGATTGGGTCCCTCATTTCTGGGGAGTGTCACACTGGACGTACCTaGCGCGGCTCGCGGCGTCTG +
Preference number: 4 (lower is better)
Translates to: WSQDLHPCVIGSLISGECHTGRT*RGSRRL
Trigger: CAGACGCCGCGAGCCGCGCCAGGTACGTCCAGTGTG...ACACTCCCCAGAAATGAGGGACCCAATCACACAAGGATGCAAATCCTGACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR CCA 90 bp GCTTCCAGCTCTCGGAGCTTACGGGGAATCTCTGGGTACAAGATCCTCCAGTCAGCCTTCAGCCAGCGTTaGGGCCTCGAACTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ASSSRSLRGISGYKILQSAFSQR*GLELLP
Trigger: AGGAAGCAGTTCGAGGCCCCAACGCTGGCTGAAGGC...TGACTGGAGGATCTTGTACCCAGAGATTCCCCGTAAGCTCCGAGAGCTGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR CCA 90 bp TCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTGGTGAAGATCACCGCATCCTTGTGTGATTaGGTCCCTCATTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SSAGSFPRPMLIWLVKITASLCD*VPHFWG
Trigger: TCCCCAGAAATGAGGGACCCAATCACACAAGGATGC...GGTGATCTTCACCAACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR CCA 90 bp CGCGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGCCTTACGGGGAATCTCTaGGTACAAGATCCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: RGVWVCVVDGDPFPLLQGLTGNL*VQDPCP
Trigger: AGGGCAAGGATCTTGTACCCAGAGATTCCCCGTAAG...GCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627232.2
CDS-3UTR TCA 90 bp GTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGCTGTCTCGTGGGTGGAGGCCATTaGCCAAATACAGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: VWVCVVDGDPFPLLQGCLVGGGH*PNTVCP
Trigger: GGGACACACTGTATTTGGTCAATGGCCTCCACCCAC...GAGACAGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR TCA 90 bp GGTCTCTTCCCAGCGCAGGGTCAGTGGGTGGAGGCCATTGACCAAATACAGTGTGTGGGTGGAGGCCATTaGCCAAATACAGTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: GLFPAQGQWVEAIDQIQCVGGGH*PNTVCP
Trigger: GGGACACACTGTATTTGGTCAATGGCCTCCACCCAC...ACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCGCTGGGAAGAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR TCA 90 bp CGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGCTGTGCTCATCTGGTTGGTaGAGATCACCAGCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: RRLGLCCRWRPVSLASGLCSSGW*RSPACS
Trigger: GCTACAAGCTGGTGATCTTCACCAACCAGATGAGCA...CAGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CCA 90 bp ACAAGATCCTCCAGTCACTGGGGCCAGTGGGAAAGACCTTCCCAGAGCGTGTGGCATTTCTGGGGAGTGTaGCCTGCTTCAGGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: TRSSSHWGQWERPSQSVWHFWGV*PASGLS
Trigger: ACTCAAGCCTGAAGCAGGCCACACTCCCCAGAAATG...CCACACGCTCTGGGAAGGTCTTTCCCACTGGCCCCAGTGACTGGAGGATCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR TCA 90 bp ACAAGATCCTCCAGTCACTGGGGCCAGTGGGAAAGACCTTCCCAGAGCGTGTGGTGCTCATCTGGTTGGTaGAGATCACCAGCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: TRSSSHWGQWERPSQSVWCSSGW*RSPACS
Trigger: GCTACAAGCTGGTGATCTTCACCAACCAGATGAGCA...CCACACGCTCTGGGAAGGTCTTTCCCACTGGCCCCAGTGACTGGAGGATCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000636214.1
CDS-3UTR TCA 90 bp TCTCGAAACCGGTTGTTGTGGCGCGCCTGCTCCAGAGTGGCGGTGAAGAGGAAGATACATGACCATGTCTaGCACGGGGATATGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SRNRLLWRACSRVAVKRKIHDHV*HGDMRG
Trigger: TCCTCTCATATCCCCGTGTCAGACATGGTCATGTAT...CTTCCTCTTCACCGCCACTCTGGAGCAGGCGCGCCACAACAACCGGTTTCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR TCA 90 bp CTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCCTTCAATACATGACCATGTCTaGCACGGGGATATGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LGSTHSRNGISRMAEKPSIHDHV*HGDMRG
Trigger: TCCTCTCATATCCCCGTGTCAGACATGGTCATGTAT...TGAAGGCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593946.5
ENST00000597965.2
ENST00000625216.2
ENST00000627232.2
CDS-3UTR TCA 90 bp GCGCAGGGTCAGTGGGTGGAGGCCATTGACCAAATACAGTGTGTCCCCCACCCCATTTGCATCCTTGTGTaGTTGGGTCCCTCATTTCTG +
Preference number: 4 (lower is better)
Translates to: AQGQWVEAIDQIQCVPHPICILV*LGPSFL
Trigger: CAGAAATGAGGGACCCAATCACACAAGGATGCAAAT...GGGGTGGGGGACACACTGTATTTGGTCAATGGCCTCCACCCACTGACCCTGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR GCA 90 bp GAGGGGTGGAGTCAGGATTTGCATCCTTGTGTGATTGGGTCCCTCATTTCTGGGCCGGCCGACACGAGGTaGTTCTTGAGAAAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: EGWSQDLHPCVIGSLISGPADTR*FLRKVD
Trigger: GTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGG...CCCAGAAATGAGGGACCCAATCACACAAGGATGCAAATCCTGACTCCACCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR CCA 90 bp GGATTGGAGGGGTGGAGTCAGGATTTGCATCCTTGTGTGATTGGGTCCCTCATTGCCAGGCGGAGTATCTaGCTGGGATTCTGGTGTGCG +
Preference number: 4 (lower is better)
Translates to: GLEGWSQDLHPCVIGSLIARRSI*LGFWCA
Trigger: CGCACACCAGAATCCCAGCCAGATACTCCGCCTGGC...AATGAGGGACCCAATCACACAAGGATGCAAATCCTGACTCCACCCCTCCAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR CCA 90 bp TGTGGTGATGAGCGTCCCGTCCAGATCAAAGCCAGCCACCTTGCCCTGGGGTTTCTTACGGGGAATCTCTaGGTACAAGATCCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: CGDERPVQIKASHLALGFLTGNL*VQDPPV
Trigger: GACTGGAGGATCTTGTACCCAGAGATTCCCCGTAAG...AAACCCCAGGGCAAGGTGGCTGGCTTTGATCTGGACGGGACGCTCATCACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000636214.1
CDS-3UTR CCA 90 bp GTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGCTGTCTCGGTTTGTGTTGTCGATaGCGACCCGTTTCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: VWVCVVDGDPFPLLQGCLGLCCR*RPVSLA
Trigger: AGCAAGGGAAACGGGTCGCCATCGACAACACAAACC...GAGACAGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR TCA 90 bp GCCAGTGGGAAAGACCTTCCCAGAGCGTGTGGTGATGAGCGTCCCGTCCAGATCATTTGCATCCTTGTGTaGTTGGGTCCCTCATTTCTG +
Preference number: 4 (lower is better)
Translates to: ASGKDLPRACGDERPVQIICILV*LGPSFL
Trigger: CAGAAATGAGGGACCCAATCACACAAGGATGCAAAT...GATCTGGACGGGACGCTCATCACCACACGCTCTGGGAAGGTCTTTCCCACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR GCA 90 bp AGGATTGGAGGGGTGGAGTCAGGATTTGCATCCTTGTGTGATTGGGTCCCTCATCTGGGGAGTGTGGCCTaGTTCAGGCTTGAGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RIGGVESGFASLCDWVPHLGSVA*FRLEFW
Trigger: CCAGAACTCAAGCCTGAAGCAGGCCACACTCCCCAG...ATGAGGGACCCAATCACACAAGGATGCAAATCCTGACTCCACCCCTCCAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR CCA 90 bp GTTGAGGGGTTAACTCCCAGCTGTTTCACTGCCACTGTCCGGGTCTCAGGATCTCATTTCTGGGGAGTGTaGCCTGCTTCAGGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: VEGLTPSCFTATVRVSGSHFWGV*PASGLS
Trigger: ACTCAAGCCTGAAGCAGGCCACACTCCCCAGAAATG...AGATCCTGAGACCCGGACAGTGGCAGTGAAACAGCTGGGAGTTAACCCCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR CCA 90 bp CCACTGAGGATTGGAGGGGTGGAGTCAGGATTTGCATCCTTGTGTGATTGGGTCTGGGTCCCTCATTTCTaGGGAGTGTGGCCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: PLRIGGVESGFASLCDWVWVPHF*GVWPAS
Trigger: TGAAGCAGGCCACACTCCCCAGAAATGAGGGACCCA...GACCCAATCACACAAGGATGCAAATCCTGACTCCACCCCTCCAATCCTCAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR CCA 90 bp CTTCCAGCTCTCGGAGCTTACGGGGAATCTCTGGGTACAAGATCCTCCAGTCACAGCTCCACTGAGGATTaGAGGGGTGGAGTCAGGATT +
Preference number: 4 (lower is better)
Translates to: LPALGAYGESLGTRSSSHSSTED*RGGVRI
Trigger: AATCCTGACTCCACCCCTCCAATCCTCAGTGGAGCT...GTGACTGGAGGATCTTGTACCCAGAGATTCCCCGTAAGCTCCGAGAGCTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR CCA 90 bp GCTTCCAGCTCTCGGAGCTTACGGGGAATCTCTGGGTACAAGATCCTCCAGTCACTTACGGGGAATCTCTaGGTACAAGATCCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: ASSSRSLRGISGYKILQSLTGNL*VQDPPV
Trigger: GACTGGAGGATCTTGTACCCAGAGATTCCCCGTAAG...TGACTGGAGGATCTTGTACCCAGAGATTCCCCGTAAGCTCCGAGAGCTGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000636214.1
CDS-3UTR CCA 90 bp TGGAGTCAGGATTTGCATCCTTGTGTGATTGGGTCCCTCATTTCTGGGGAGTGTCGCAGGGTCAGTGGGTaGAGGCCATTGACCAAATAC +
Preference number: 4 (lower is better)
Translates to: WSQDLHPCVIGSLISGECRRVSG*RPLTKY
Trigger: GTATTTGGTCAATGGCCTCCACCCACTGACCCTGCG...ACACTCCCCAGAAATGAGGGACCCAATCACACAAGGATGCAAATCCTGACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR CCA 90 bp GGATTGGAGGGGTGGAGTCAGGATTTGCATCCTTGTGTGATTGGGTCCCTCATTGCATCCTTGTGTGATTaGGTCCCTCATTTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GLEGWSQDLHPCVIGSLIASLCD*VPHFWG
Trigger: TCCCCAGAAATGAGGGACCCAATCACACAAGGATGC...AATGAGGGACCCAATCACACAAGGATGCAAATCCTGACTCCACCCCTCCAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR TCA 90 bp GATGCTCATCTGGTTGGTGAAGATCACCAGCTTGTAGCCCTCGGCTTCCAGCTCTGCCTCTTTCCACCTTaGCTTCTAATTTTCATCCCA +
Preference number: 4 (lower is better)
Translates to: DAHLVGEDHQLVALGFQLCLFPP*LLIFIP
Trigger: TGGGATGAAAATTAGAAGTCAAGGTGGAAAGAGGCA...GAGCTGGAAGCCGAGGGCTACAAGCTGGTGATCTTCACCAACCAGATGAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636214.1
CDS GCA 90 bp GGGACCGCGGCTTGGGCTCACGGCCACTTCCGACCAGGGAGGTCCTaGCCGAGGTGCCCCGCCTGCAACCCGGCCGGCGGCGGTCGGTTC +
Preference number: 5 (lower is better)
Translates to: GTAAWAHGHFRPGRS*PRCPACNPAGGGRF
Trigger: GAACCGACCGCCGCCGGCCGGGTTGCAGGCGGGGCACCTCGGGCAGGACCTCCCTGGTCGGAAGTGGCCGTGAGCCCAAGCCGCGGTCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322344.8
ENST00000595792.1
ENST00000600573.5
ENST00000626274.2
CDS GCA 90 bp GCTTGGGCTCACGGCCACTTCCGACCAGGGAGGTCCTGCCCGAGGTaGCCCGCCTGCAACCCGGCCGGCGGCGGTCGGTTCCTCGGCGGA +
Preference number: 5 (lower is better)
Translates to: AWAHGHFRPGRSCPR*PACNPAGGGRFLGG
Trigger: TCCGCCGAGGAACCGACCGCCGCCGGCCGGGTTGCAGGCGGGGCACCTCGGGCAGGACCTCCCTGGTCGGAAGTGGCCGTGAGCCCAAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322344.8
ENST00000600573.5
CDS GCA 90 bp ATCCTGGGTGCCGGCCACTTCCGACCAGGGAGGTCCTGCCCGAGGTaGCCCGCCTGCAACCCGGCCGGCGGCGGTCGGTTCCTCGGCGGA +
Preference number: 5 (lower is better)
Translates to: ILGAGHFRPGRSCPR*PACNPAGGGRFLGG
Trigger: TCCGCCGAGGAACCGACCGCCGCCGGCCGGGTTGCAGGCGGGGCACCTCGGGCAGGACCTCCCTGGTCGGAAGTGGCCGGCACCCAGGAT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596726.3
CDS-3UTR CAA 90 bp GGGAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCGCCCGGGACCGCGGCTaGGGCTCACGGCCACTTCCG +
Preference number: 5 (lower is better)
Translates to: GSWAGLSPRRTGSTAAPAARDRG*GSRPLP
Trigger: CGGAAGTGGCCGTGAGCCCAAGCCGCGGTCCCGGGC...GGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600910.5
CDS GCA 90 bp CTCGAGCCACAAGCGGCCCGGGGCCTCCACCTCGCCCATCCTGGGTaGCGGCCTGGGGAGCAGGTAAACGGGCTTGAGCGGCGCACAGCC +
Preference number: 5 (lower is better)
Translates to: LEPQAARGLHLAHPG*RPGEQVNGLERRTA
Trigger: GGCTGTGCGCCGCTCAAGCCCGTTTACCTGCTCCCCAGGCCGGCACCCAGGATGGGCGAGGTGGAGGCCCCGGGCCGCTTGTGGCTCGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000596014.5
ENST00000629088.1
ENST00000631020.2
CDS TCA 90 bp GCGGGCTCACCCGGTTGTTGTGGCGCGCCTGCTCCAGAGTGGCGGTaGAGAGGAAGCAGCGGCAGGGGACGCCCGCGGCTCGGGCACACT +
Preference number: 5 (lower is better)
Translates to: AGSPGCCGAPAPEWR*RGSSGRGRPRLGHT
Trigger: AGTGTGCCCGAGCCGCGGGCGTCCCCTGCCGCTGCTTCCTCTTCACCGCCACTCTGGAGCAGGCGCGCCACAACAACCGGGTGAGCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601816.3
CDS GCA 90 bp GGGGTGTCCGGGCTGAGCGGGCTCACCCGGTTGTTGTGGCGCGCCTaGTCCAGAGTGGCGGTGAAGAGGAAGCAGCGGCAGGGGACGCCC +
Preference number: 5 (lower is better)
Translates to: GVSGLSGLTRLLWRA*SRVAVKRKQRQGTP
Trigger: GGGCGTCCCCTGCCGCTGCTTCCTCTTCACCGCCACTCTGGAGCAGGCGCGCCACAACAACCGGGTGAGCCCGCTCAGCCCGGACACCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601816.3
CDS-3UTR CAA 90 bp AGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGCCCAGGACCAGGGCTaGCCCGTCCGAGGGCAGGAA +
Preference number: 5 (lower is better)
Translates to: SWAGLSPRRTGSTAAPASAQDQG*PVRGQE
Trigger: TTCCTGCCCTCGGACGGGCAAGCCCTGGTCCTGGGC...CGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CAA 90 bp GGCAGGGGACGCCCGCGGCTCGGGCACACTGGACGTACCTGGCGCGGCTCGCGGATCTCTCGAAACCGGTaGTTGTGGCGCGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GRGRPRLGHTGRTWRGSRISRNR*LWRACS
Trigger: GGAGCAGGCGCGCCACAACAACCGGTTTCGAGAGAT...CCGCGAGCCGCGCCAGGTACGTCCAGTGTGCCCGAGCCGCGGGCGTCCCCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CAA 90 bp GCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGGCCTCCACCTTGGCCTaGAACTCCTCGGCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: AGRGSALGELAVQPPQPRASTLA*NSSAGS
Trigger: GCTGCCAGCCGAGGAGTTCAAGGCCAAGGTGGAGGC...CCGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CAA 90 bp GAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCATGGGCGTGCCGTCGTaGGCCTGCTCCTGCAGATGG +
Preference number: 5 (lower is better)
Translates to: ELGGAQPSENWQYSRPSLMGVPS*ACSCRW
Trigger: CCATCTGCAGGAGCAGGCCAACGACGGCACGCCCAT...GAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CAA 90 bp GGAAGCAGCGGCAGGGGACGCCCGCGGCTCGGGCACACTGGACGTACCTGGCGCTCTCGAAACCGGTTGTaGTGGCGCGCCTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: GSSGRGRPRLGHTGRTWRSRNRL*WRACSR
Trigger: TCTGGAGCAGGCGCGCCACAACAACCGGTTTCGAGA...GCGCCAGGTACGTCCAGTGTGCCCGAGCCGCGGGCGTCCCCTGCCGCTGCTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS GCA 90 bp AGGTGCGCTGGGAGGGAGCAGGGCTCGGACCCGCTCCGAGCGGGATaGAGGCGGTCTGGGATGCAGGCGGCAGCTGTAGGAGTTTGGTCT +
Preference number: 5 (lower is better)
Translates to: RCAGREQGSDPLRAG*RRSGMQAAAVGVWS
Trigger: AGACCAAACTCCTACAGCTGCCGCCTGCATCCCAGACCGCCTGCATCCCGCTCGGAGCGGGTCCGAGCCCTGCTCCCTCCCAGCGCACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629179.1
CDS CCA 90 bp GAGGGAGCAGGGCTCGGACCCGCTCCGAGCGGGATGCAGGCGGTCTaGGATGCAGGCGGCAGCTGTAGGAGTTTGGTCTGGCGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: EGAGLGPAPSGMQAV*DAGGSCRSLVWRSA
Trigger: TGCTGACCGCCAGACCAAACTCCTACAGCTGCCGCCTGCATCCCAGACCGCCTGCATCCCGCTCGGAGCGGGTCCGAGCCCTGCTCCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629179.1
CDS-3UTR CAA 90 bp TGCTCCAGAGTGGCGGTGAAGAGGAAGCAGCGGCAGGGGACGCCCGCGGCTCGGTCGCGGCGTCTGGGTTaGTGTTGTCGATGGCGACCC +
Preference number: 5 (lower is better)
Translates to: CSRVAVKRKQRQGTPAARSRRLG*CCRWRP
Trigger: GGGTCGCCATCGACAACACAAACCCAGACGCCGCGA...CCGAGCCGCGGGCGTCCCCTGCCGCTGCTTCCTCTTCACCGCCACTCTGGAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CAA 90 bp AGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGAGCCTTCAGCCAGCGTaGGGGCCTCGAACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: SWAGLSPRRTGSTAAPASSLQPA*GPRTAS
Trigger: GGAAGCAGTTCGAGGCCCCAACGCTGGCTGAAGGCT...CGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS TCA 90 bp CCTCGCCCATCCTGGGTGCCGGCCTGGGGAGCAGGTAAACGGGCTTaGGCGGCGCACAGCCCCAATTTGCTGCAGGAAGTCCCGCCTCCT +
Preference number: 5 (lower is better)
Translates to: PRPSWVPAWGAGKRA*AAHSPNLLQEVPPP
Trigger: AGGAGGCGGGACTTCCTGCAGCAAATTGGGGCTGTGCGCCGCTCAAGCCCGTTTACCTGCTCCCCAGGCCGGCACCCAGGATGGGCGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596014.5
CDS GCA 90 bp GGGCACGCGCACAGGAACAGGACACTTACCCCCAGGGAATCCCACTaGGACAACCACCTCCGGGCTGGCGCTCAGGAGGGCCCTGGACTC +
Preference number: 5 (lower is better)
Translates to: GHAHRNRTLTPRESH*DNHLRAGAQEGPGL
Trigger: GAGTCCAGGGCCCTCCTGAGCGCCAGCCCGGAGGTGGTTGTCGCAGTGGGATTCCCTGGGGGTAAGTGTCCTGTTCCTGTGCGCGTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593706.3
CDS CCA 90 bp ACCTACGGCCCCGCGGTCACGCTACCTGGCGCGGCTCGCGGCGTCTaGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGC +
Preference number: 5 (lower is better)
Translates to: TYGPAVTLPGAARGV*VCVVDGDPFPLLQG
Trigger: GCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTAGCGTGACCGCGGGGCCGTAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595081.5
ENST00000599454.5
ENST00000601816.3
CDS-3UTR CAA 90 bp GGGAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTGCGACCAGCTCCACTaGAGTTCTGGAGCACTTCCG +
Preference number: 5 (lower is better)
Translates to: GSWAGLSPRRTGSTAAPACDQLH*SSGALP
Trigger: CGGAAGTGCTCCAGAACTCAAGTGGAGCTGGTCGCA...GGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CAA 90 bp CAGCGGCAGGGGACGCCCGCGGCTCGGGCACACTGGACGTACCTGGCGCGGCTCCCGATGCTCATCTGGTaGGTGAAGATCACCAGCTTG +
Preference number: 5 (lower is better)
Translates to: QRQGTPAARAHWTYLARLPMLIW*VKITSL
Trigger: CAAGCTGGTGATCTTCACCAACCAGATGAGCATCGG...GAGCCGCGCCAGGTACGTCCAGTGTGCCCGAGCCGCGGGCGTCCCCTGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp AGAGTGGCGGTGAAGAGGAAGCAGCGGCAGGGGACGCCCGCGGCTCGGGCACACAAGGGCAGGCCAAGGTaGAGGGCAAACAGGCGATCG +
Preference number: 5 (lower is better)
Translates to: RVAVKRKQRQGTPAARAHKGRPR*RANRRS
Trigger: CGATCGCCTGTTTGCCCTCAACCTTGGCCTGCCCTT...GTGTGCCCGAGCCGCGGGCGTCCCCTGCCGCTGCTTCCTCTTCACCGCCACTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CAA 90 bp GGAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTTCTCGAAACCGGTTGTaGTGGCGCGCCTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: GAGRGSALGELAVQPPQPSRNRL*WRACSR
Trigger: TCTGGAGCAGGCGCGCCACAACAACCGGTTTCGAGA...AGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CAA 90 bp AGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGATCTCTCGAAACCGGTaGTTGTGGCGCGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SWAGLSPRRTGSTAAPASISRNR*LWRACS
Trigger: GGAGCAGGCGCGCCACAACAACCGGTTTCGAGAGAT...CGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS CCA 90 bp GCCGACACGAGGTGCTTCTTGAGAAAGGTGGACTTCCCGGCTGTGTaGGGGGCAGTGTCGGTGGGTGGCCTAGGACCCAGGCGGGGCTCA +
Preference number: 5 (lower is better)
Translates to: ADTRCFLRKVDFPAV*GAVSVGGLGPRRGS
Trigger: TGAGCCCCGCCTGGGTCCTAGGCCACCCACCGACACTGCCCCCCACACAGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593706.3
CDS CCA 90 bp GACTCTCTCATCGCTGGTGTCATCCGTGTCGTGGAAAAGGTGCGCTaGGAGGGAGCAGGGCTCGGACCCGCTCCGAGCGGGATGCAGGCG +
Preference number: 5 (lower is better)
Translates to: DSLIAGVIRVVEKVR*EGAGLGPAPSGMQA
Trigger: CGCCTGCATCCCGCTCGGAGCGGGTCCGAGCCCTGCTCCCTCCCAGCGCACCTTTTCCACGACACGGATGACACCAGCGATGAGAGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629179.1
CDS-3UTR CAA 90 bp GCCACTGTCCGGGTCTCAGGATCTGCGACCAGCTCCACTGAGGATTGGAGGGGTGCCCAGGACCAGGGCTaGCCCGTCCGAGGGCAGGAA +
Preference number: 5 (lower is better)
Translates to: ATVRVSGSATSSTEDWRGAQDQG*PVRGQE
Trigger: TTCCTGCCCTCGGACGGGCAAGCCCTGGTCCTGGGC...ACCCCTCCAATCCTCAGTGGAGCTGGTCGCAGATCCTGAGACCCGGACAGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR CAA 90 bp GCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGATCTCTCTTCTCATCTaGGGACACCAGAGGGGTGCC +
Preference number: 5 (lower is better)
Translates to: AGRGSALGELAVQPPQPRISLLI*GHQRGA
Trigger: GGCACCCCTCTGGTGTCCCAAGATGAGAAGAGAGAT...CCGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CAA 90 bp AGTGGCGGTGAAGAGGAAGCAGCGGCAGGGGACGCCCGCGGCTCGGGCACACTGGCGTCTGGGTTTGTGTaGTCGATGGCGACCCGTTTC +
Preference number: 5 (lower is better)
Translates to: SGGEEEAAAGDARGSGTLASGFV*SMATRF
Trigger: GAAACGGGTCGCCATCGACAACACAAACCCAGACGC...CAGTGTGCCCGAGCCGCGGGCGTCCCCTGCCGCTGCTTCCTCTTCACCGCCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CAA 90 bp AGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCGGAGAAACAGCGTTTATaGTGGAGGGGAGCTGGGCGG +
Preference number: 5 (lower is better)
Translates to: SWAGLSPRRTGSTAAPASEKQRL*WRGAGR
Trigger: CCGCCCAGCTCCCCTCCACAATAAACGCTGTTTCTC...CGAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS GCA 90 bp ACCGAGACTCTCTCATCGCTGGTGTCATCCGTGTCGTGGAAAAGGTaGGCTGGGAGGGAGCAGGGCTCGGACCCGCTCCGAGCGGGATGC +
Preference number: 5 (lower is better)
Translates to: TETLSSLVSSVSWKR*AGREQGSDPLRAGC
Trigger: GCATCCCGCTCGGAGCGGGTCCGAGCCCTGCTCCCTCCCAGCGCACCTTTTCCACGACACGGATGACACCAGCGATGAGAGAGTCTCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629179.1
CDS CCA 90 bp CTGGCTCATGGAGCCCACGGCATGATGCCGTGGTTGGAGGGATGCTaGTCCCTGTGGTGCTGTCTGGTGACACCACGCCCTGTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: LAHGAHGMMPWLEGC*SLWCCLVTPRPVPA
Trigger: GGCAGGCACAGGGCGTGGTGTCACCAGACAGCACCACAGGGACCAGCATCCCTCCAACCACGGCATCATGCCGTGGGCTCCATGAGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596624.1
CDS-3UTR CAA 90 bp GACGTACCTGGCGCGGCTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGCCGGCTGCTGGCCACTaGAGAAAGAACTCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: DVPGAARGVWVCVVDGDPPAAGH*RKNSSG
Trigger: GCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGG...CGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTACGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CAA 90 bp CGTCACCGGCTTCCGGTACAAGCCTGCGTGCGTGGCCACCAGCACCTGGAAGGGGGCGACCCGTTTCCCTaGCTTCAGGGCTGTCTCACA +
Preference number: 5 (lower is better)
Translates to: RHRLPVQACVRGHQHLEGGDPFP*LQGCLT
Trigger: TGTGAGACAGCCCTGAAGCAAGGGAAACGGGTCGCC...CCCTTCCAGGTGCTGGTGGCCACGCACGCAGGCTTGTACCGGAAGCCGGTGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp ACTTCCCGGCCCCAGGGAATCCCACTGCGACAACCACCTCCGGGCTGGCGCTCATCTCGAAACCGGTTGTaGTGGCGCGCCTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: TSRPQGIPLRQPPPGWRSSRNRL*WRACSR
Trigger: TCTGGAGCAGGCGCGCCACAACAACCGGTTTCGAGA...TGAGCGCCAGCCCGGAGGTGGTTGTCGCAGTGGGATTCCCTGGGGCCGGGAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS GCA 90 bp TGCCTGGCTCATGGAGCCCACGGCATGATGCCGTGGTTGGAGGGATaGTGGTCCCTGTGGTGCTGTCTGGTGACACCACGCCCTGTGCCT +
Preference number: 5 (lower is better)
Translates to: CLAHGAHGMMPWLEG*WSLWCCLVTPRPVP
Trigger: AGGCACAGGGCGTGGTGTCACCAGACAGCACCACAGGGACCAGCATCCCTCCAACCACGGCATCATGCCGTGGGCTCCATGAGCCAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596624.1
CDS GCA 90 bp GGCTTCAACTCCTGGGTCCCGGTAGTTGAGGGGTTAACTCCCAGCTaGAGAAAGAGAGGGAGGAGCTGGGACTGGCTCCGCCCCCACCGG +
Preference number: 5 (lower is better)
Translates to: GFNSWVPVVEGLTPS*RKRGRSWDWLRPHR
Trigger: CCGGTGGGGGCGGAGCCAGTCCCAGCTCCTCCCTCTCTTTCTGCAGCTGGGAGTTAACCCCTCAACTACCGGGACCCAGGAGTTGAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625299.1
CDS CCA 90 bp TGGACTTCCCGGCGGATCAAAGGCTGGGAGCTCGAAGCCGGCTGCTaGCCACTTGAGAAAGAACTCCTCAGGCGTGGCGAAGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: WTSRRIKGWELEAGC*PLEKELLRRGEGQA
Trigger: GGCCTGCCCTTCGCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGCCGGGAAGTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625216.2
CDS CCA 90 bp GCCCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATaGCAGAGAAGCCTTCAGCCAGCGTTGGGGCCTCGAACTGCTGTA +
Preference number: 5 (lower is better)
Translates to: APASAPPIAGTGSPG*QRSLQPALGPRTAV
Trigger: TACAGCAGTTCGAGGCCCCAACGCTGGCTGAAGGCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640501.1
CDS-3UTR CAA 90 bp GCCCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGATCAAAGCCAGCCACCTaGCCCTGGGGTTTCACCCCA +
Preference number: 5 (lower is better)
Translates to: APASAPPIAGTGSPGWQRSKPAT*PWGFTP
Trigger: TGGGGTGAAACCCCAGGGCAAGGTGGCTGGCTTTGA...TCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000600910.5
CDS-3UTR CAA 90 bp GAGCTGGGCGGGGCTCAGCCCTCGGAGAACTGGCAGTACAGCCGCCCCAGCCTCCCGATGCTCATCTGGTaGGTGAAGATCACCAGCTTG +
Preference number: 5 (lower is better)
Translates to: ELGGAQPSENWQYSRPSLPMLIW*VKITSL
Trigger: CAAGCTGGTGATCTTCACCAACCAGATGAGCATCGG...GAGGCTGGGGCGGCTGTACTGCCAGTTCTCCGAGGGCTGAGCCCCGCCCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CAA 90 bp CTTGGCCTTGAACTCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTGCCTCCACCTTGGCCTaGAACTCCTCGGCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: LGLELLGWQLPAPDAHLVASTLA*NSSAGS
Trigger: GCTGCCAGCCGAGGAGTTCAAGGCCAAGGTGGAGGC...AACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGAGTTCAAGGCCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000627232.2
ENST00000636214.1
CDS-3UTR CAA 90 bp TCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTGGTGAAGATCACCAGCATGGGCGTGCCGTCGTaGGCCTGCTCCTGCAGATGG +
Preference number: 5 (lower is better)
Translates to: SAGSFPRPMLIWLVKITSMGVPS*ACSCRW
Trigger: CCATCTGCAGGAGCAGGCCAACGACGGCACGCCCAT...GCTGGTGATCTTCACCAACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp GCCCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGACCGGCTGCTGGCCACTaGAGAAAGAACTCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: APASAPPIAGTGSPGWQRPAAGH*RKNSSG
Trigger: GCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGG...TCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CAA 90 bp GGCCTGCTCCTGCAGATGGTCCCACATGCCCGTCACCGGCTTCCGGTACAAGCCCCGGCTGCTGGCCACTaGAGAAAGAACTCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: GLLLQMVPHARHRLPVQAPAAGH*RKNSSG
Trigger: GCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGG...GGCTTGTACCGGAAGCCGGTGACGGGCATGTGGGACCATCTGCAGGAGCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp TGTCCCCGATGGATATGGGCGTGCCGTCGTTGGCCTGCTCCTGCAGATGGTCCCTCGCGGCGTCTGGGTTaGTGTTGTCGATGGCGACCC +
Preference number: 5 (lower is better)
Translates to: CPRWIWACRRWPAPADGPSRRLG*CCRWRP
Trigger: GGGTCGCCATCGACAACACAAACCCAGACGCCGCGA...GGGACCATCTGCAGGAGCAGGCCAACGACGGCACGCCCATATCCATCGGGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp TCGGGCACACTGGACGTACCTGGCGCGGCTCGCGGCGTCTGGGTTTGTGTTGTCTCTCGAAACCGGTTGTaGTGGCGCGCCTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: SGTLDVPGAARGVWVCVVSRNRL*WRACSR
Trigger: TCTGGAGCAGGCGCGCCACAACAACCGGTTTCGAGA...GACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTACGTCCAGTGTGCCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CAA 90 bp GCGCGGCTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCATCTCTCGAAACCGGTaGTTGTGGCGCGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: ARLAASGFVLSMATRFPCISRNR*LWRACS
Trigger: GGAGCAGGCGCGCCACAACAACCGGTTTCGAGAGAT...GCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CAA 90 bp TCCCCGATGGATATGGGCGTGCCGTCGTTGGCCTGCTCCTGCAGATGGTCCCACAGCCTTCAGCCAGCGTaGGGGCCTCGAACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: SPMDMGVPSLACSCRWSHSLQPA*GPRTAS
Trigger: GGAAGCAGTTCGAGGCCCCAACGCTGGCTGAAGGCT...GTGGGACCATCTGCAGGAGCAGGCCAACGACGGCACGCCCATATCCATCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS GCA 90 bp AGGTGGACTTCCCGGCGGATCAAAGGCTGGGAGCTCGAAGCCGGCTaGTGGCCACTTGAGAAAGAACTCCTCAGGCGTGGCGAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: RWTSRRIKGWELEAG*WPLEKELLRRGEGQ
Trigger: CTGCCCTTCGCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGCCGGGAAGTCCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625216.2
CDS CCA 90 bp GTCTCACACGTGGTCACACAGCGCTGCCAGGAGCCTAGCGTGTCCTaGGGACACGAGAGGTCACAAACAGATCGGCAGACCCAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: VSHVVTQRCQEPSVS*GHERSQTDRQTQGE
Trigger: CTCCCCCTGGGTCTGCCGATCTGTTTGTGACCTCTCGTGTCCCCAGGACACGCTAGGCTCCTGGCAGCGCTGTGTGACCACGTGTGAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593706.3
CDS CCA 90 bp CACGCTACCTGGCGCGGCTCGCGGCGTCTGGGTTTGTGTTGTCGATaGCGACCCGTTTCCCTTGCTTCAGGGCTGTCTCACACGTGGTCA +
Preference number: 5 (lower is better)
Translates to: HATWRGSRRLGLCCR*RPVSLASGLSHTWS
Trigger: TGACCACGTGTGAGACAGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTAGCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595081.5
ENST00000599454.5
ENST00000601816.3
CDS CCA 90 bp TGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGCTGTCTCACACGTaGTCACACAGCGCTGCCAGGAGCCTAGCGTGTCCTGGGGACACG +
Preference number: 5 (lower is better)
Translates to: CRWRPVSLASGLSHT*SHSAARSLACPGDT
Trigger: CGTGTCCCCAGGACACGCTAGGCTCCTGGCAGCGCTGTGTGACCACGTGTGAGACAGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595081.5
CDS-3UTR CAA 90 bp GAGGGGTGGAGTCAGGATTTGCATCCTTGTGTGATTGGGTCCCTCATTTCTGGGGCCCGGGACCGCGGCTaGGGCTCACGGCCACTTCCG +
Preference number: 5 (lower is better)
Translates to: EGWSQDLHPCVIGSLISGARDRG*GSRPLP
Trigger: CGGAAGTGGCCGTGAGCCCAAGCCGCGGTCCCGGGC...CCCAGAAATGAGGGACCCAATCACACAAGGATGCAAATCCTGACTCCACCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598020.3
CDS-3UTR CAA 90 bp CCAGCTCTCGGAGCTTACGGGGAATCTCTGGGTACAAGATCCTCCAGTCACTGGGCCCAGGACCAGGGCTaGCCCGTCCGAGGGCAGGAA +
Preference number: 5 (lower is better)
Translates to: PALGAYGESLGTRSSSHWAQDQG*PVRGQE
Trigger: TTCCTGCCCTCGGACGGGCAAGCCCTGGTCCTGGGC...CCAGTGACTGGAGGATCTTGTACCCAGAGATTCCCCGTAAGCTCCGAGAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000636214.1
CDS-3UTR CAA 90 bp GCCAGTGGGAAAGACCTTCCCAGAGCGTGTGGTGATGAGCGTCCCGTCCAGATCGCCTCCACCTTGGCCTaGAACTCCTCGGCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: ASGKDLPRACGDERPVQIASTLA*NSSAGS
Trigger: GCTGCCAGCCGAGGAGTTCAAGGCCAAGGTGGAGGC...GATCTGGACGGGACGCTCATCACCACACGCTCTGGGAAGGTCTTTCCCACTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000636214.1
CDS-3UTR CAA 90 bp GGCAGAGAGGCCCTGAGCGGGAGACAGTCCTCGGATCAAAGGCTGGGAGCTCGAACCACAGCCTCCACCTaGGCCTTGAACTCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: GREALSGRQSSDQRLGARTTAST*ALNSSA
Trigger: AGCCGAGGAGTTCAAGGCCAAGGTGGAGGCTGTGGT...TCGAGCTCCCAGCCTTTGATCCGAGGACTGTCTCCCGCTCAGGGCCTCTCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp CCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCACCACAGCCTCCACCTaGGCCTTGAACTCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: PASAPPIAGTGSPGWQRSTTAST*ALNSSA
Trigger: AGCCGAGGAGTTCAAGGCCAAGGTGGAGGCTGTGGT...GCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CAA 90 bp TCACACAGCGCTGCCAGGAGCCTAGCGTGTCCCTGTTCACGTGGACATATCCGGATGGGCGTGCCGTCGTaGGCCTGCTCCTGCAGATGG +
Preference number: 5 (lower is better)
Translates to: SHSAARSLACPCSRGHIRMGVPS*ACSCRW
Trigger: CCATCTGCAGGAGCAGGCCAACGACGGCACGCCCAT...CCGGATATGTCCACGTGAACAGGGACACGCTAGGCTCCTGGCAGCGCTGTGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp CCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCAAGGGCAGGCCAAGGTaGAGGGCAAACAGGCGATCG +
Preference number: 5 (lower is better)
Translates to: PASAPPIAGTGSPGWQRSKGRPR*RANRRS
Trigger: CGATCGCCTGTTTGCCCTCAACCTTGGCCTGCCCTT...GCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CAA 90 bp CCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGAAGGGCAGGCCAAGGTaGAGGGCAAACAGGCGATCG +
Preference number: 5 (lower is better)
Translates to: PSLGSTHSRNGISRMAEKKGRPR*RANRRS
Trigger: CGATCGCCTGTTTGCCCTCAACCTTGGCCTGCCCTT...CTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CAA 90 bp ACACTGGACGTACCTGGCGCGGCTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCGGCGACCCGTTTCCCTaGCTTCAGGGCTGTCTCACA +
Preference number: 5 (lower is better)
Translates to: TLDVPGAARGVWVCVVDGGDPFP*LQGCLT
Trigger: TGTGAGACAGCCCTGAAGCAAGGGAAACGGGTCGCC...GCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTACGTCCAGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CAA 90 bp AGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCCTAGCCTTCAGCCAGCGTaGGGGCCTCGAACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: SLGSTHSRNGISRMAEKPSLQPA*GPRTAS
Trigger: GGAAGCAGTTCGAGGCCCCAACGCTGGCTGAAGGCT...AGGCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000593946.5
ENST00000597965.2
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CAA 90 bp TCAGGCGTGGCGAAGGGCAGGCCAAGGTTGAGGGCAAACAGGCGATCGGCGCAGGAGAAACAGCGTTTATaGTGGAGGGGAGCTGGGCGG +
Preference number: 5 (lower is better)
Translates to: SGVAKGRPRLRANRRSAQEKQRL*WRGAGR
Trigger: CCGCCCAGCTCCCCTCCACAATAAACGCTGTTTCTC...CTGCGCCGATCGCCTGTTTGCCCTCAACCTTGGCCTGCCCTTCGCCACGCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS CCA 90 bp AGTATCAGGACCGAGACTCTCTCATCGCTGGTGTCATCCGTGTCGTaGAAAAGGTGCGCTGGGAGGGAGCAGGGCTCGGACCCGCTCCGA +
Preference number: 5 (lower is better)
Translates to: SIRTETLSSLVSSVS*KRCAGREQGSDPLR
Trigger: TCGGAGCGGGTCCGAGCCCTGCTCCCTCCCAGCGCACCTTTTCCACGACACGGATGACACCAGCGATGAGAGAGTCTCGGTCCTGATACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629179.1
CDS-3UTR CAA 90 bp ACACTGGACGTACCTGGCGCGGCTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCTCTCCCAGCCGGGGTTaGACTTCCGCATACGCTTCT +
Preference number: 5 (lower is better)
Translates to: TLDVPGAARGVWVCVVDGSPSRG*TSAYAS
Trigger: AGAAGCGTATGCGGAAGTCAAACCCCGGCTGGGAGA...GCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTACGTCCAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp CCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCTCTCCCAGCCGGGGTTaGACTTCCGCATACGCTTCT +
Preference number: 5 (lower is better)
Translates to: PASAPPIAGTGSPGWQRSSPSRG*TSAYAS
Trigger: AGAAGCGTATGCGGAAGTCAAACCCCGGCTGGGAGA...GCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CAA 90 bp CACCTTGGCCTTGAACTCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGTCTCCCAGCCGGGGTTaGACTTCCGCATACGCTTCT +
Preference number: 5 (lower is better)
Translates to: HLGLELLGWQLPAPDAHLSPSRG*TSAYAS
Trigger: AGAAGCGTATGCGGAAGTCAAACCCCGGCTGGGAGA...CAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGAGTTCAAGGCCAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000627232.2
ENST00000636214.1
CDS-3UTR CAA 90 bp CTTGGCCTTGAACTCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTTCAAAGCCAGCCACCTaGCCCTGGGGTTTCACCCCA +
Preference number: 5 (lower is better)
Translates to: LGLELLGWQLPAPDAHLVSKPAT*PWGFTP
Trigger: TGGGGTGAAACCCCAGGGCAAGGTGGCTGGCTTTGA...AACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGAGTTCAAGGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000636214.1
CDS-3UTR CAA 90 bp GTGGTCACACAGCGCTGCCAGGAGCCTAGCGTGTCCCTGTTCACGTGGACATATGCCTCCACCTTGGCCTaGAACTCCTCGGCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: VVTQRCQEPSVSLFTWTYASTLA*NSSAGS
Trigger: GCTGCCAGCCGAGGAGTTCAAGGCCAAGGTGGAGGC...ATATGTCCACGTGAACAGGGACACGCTAGGCTCCTGGCAGCGCTGTGTGACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp GGCTGCGTCTCCCACAAAGATGCTGTCCCCGATGGATATGGGCGTGCCGTCGTTTCGCGGCGTCTGGGTTaGTGTTGTCGATGGCGACCC +
Preference number: 5 (lower is better)
Translates to: GCVSHKDAVPDGYGRAVVSRRLG*CCRWRP
Trigger: GGGTCGCCATCGACAACACAAACCCAGACGCCGCGA...AACGACGGCACGCCCATATCCATCGGGGACAGCATCTTTGTGGGAGACGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp AGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCCTATCTCTCGAAACCGGTaGTTGTGGCGCGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SLGSTHSRNGISRMAEKPISRNR*LWRACS
Trigger: GGAGCAGGCGCGCCACAACAACCGGTTTCGAGAGAT...AGGCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000593946.5
ENST00000597965.2
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CAA 90 bp GGCTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAAGCCTTCAGCCAGCGTaGGGGCCTCGAACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: GSRRLGLCCRWRPVSLASSLQPA*GPRTAS
Trigger: GGAAGCAGTTCGAGGCCCCAACGCTGGCTGAAGGCT...TGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CAA 90 bp GTCACACAGCGCTGCCAGGAGCCTAGCGTGTCCCTGTTCACGTGGACATATCCGAGCCTTCAGCCAGCGTaGGGGCCTCGAACTGCTTCC +
Preference number: 5 (lower is better)
Translates to: VTQRCQEPSVSLFTWTYPSLQPA*GPRTAS
Trigger: GGAAGCAGTTCGAGGCCCCAACGCTGGCTGAAGGCT...CGGATATGTCCACGTGAACAGGGACACGCTAGGCTCCTGGCAGCGCTGTGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp TCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTGGTGAAGATCACCAGCCGGCCTTCATCTCTCTaGCTGCAACGCGAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: SAGSFPRPMLIWLVKITSRPSSL*LQREAQ
Trigger: CTGAGCCTCGCGTTGCAGCAAGAGAGATGAAGGCCG...GCTGGTGATCTTCACCAACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636214.1
CDS-3UTR CAA 90 bp CTGAGCGGGAGACAGTCCTCGGATCAAAGGCTGGGAGCTCGAAGCCGGCTGCTGCTGGGTACAAGATCCTaGCCCTGGGGTTTCACCCCA +
Preference number: 5 (lower is better)
Translates to: LSGRQSSDQRLGARSRLLLGTRS*PWGFTP
Trigger: TGGGGTGAAACCCCAGGGCAAGGATCTTGTACCCAG...CAGCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGAGGACTGTCTCCCGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627232.2
CDS TCA 90 bp AATCTCTGGGTACAAGATCCTACGGCAGGTATGAAGCGGCAGGGGTaGCCCGGGGCCAGAGGTGGACTCCAGGCCTCACTCACTCCCTTG +
Preference number: 5 (lower is better)
Translates to: NLWVQDPTAGMKRQG*PGARGGLQASLTPL
Trigger: CAAGGGAGTGAGTGAGGCCTGGAGTCCACCTCTGGCCCCGGGTCACCCCTGCCGCTTCATACCTGCCGTAGGATCTTGTACCCAGAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594661.5
ENST00000629179.1
CDS-3UTR CAA 90 bp CTTGGCCTTGAACTCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTTGCGACCAGCTCCACTaGAGTTCTGGAGCACTTCCG +
Preference number: 5 (lower is better)
Translates to: LGLELLGWQLPAPDAHLVCDQLH*SSGALP
Trigger: CGGAAGTGCTCCAGAACTCAAGTGGAGCTGGTCGCA...AACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGAGTTCAAGGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627232.2
ENST00000636214.1
CDS-3UTR CAA 90 bp TCCTCGGCTGGCAGCTTCCCGCGCCCGATGCTCATCTGGTTGGTGAAGATCACCTGCGACCAGCTCCACTaGAGTTCTGGAGCACTTCCG +
Preference number: 5 (lower is better)
Translates to: SSAGSFPRPMLIWLVKITCDQLH*SSGALP
Trigger: CGGAAGTGCTCCAGAACTCAAGTGGAGCTGGTCGCA...GGTGATCTTCACCAACCAGATGAGCATCGGGCGCGGGAAGCTGCCAGCCGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000627232.2
ENST00000636214.1
CDS-3UTR CAA 90 bp GCCGGCTGCTGGCCACTTGAGAAAGAACTCCTCAGGCGTGGCGAAGGGCAGGCCAGTGGGTGGAGGCCATaGACCAAATACAGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: AGCWPLEKELLRRGEGQASGWRP*TKYSVS
Trigger: GGACACACTGTATTTGGTCAATGGCCTCCACCCACT...GGCCTGCCCTTCGCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp TCCAGATCAAAGCCAGCCACCTTGCCCTGGGGTTTCACCCCAGCTGCGGTGAACTCAAAGCCAGCCACCTaGCCCTGGGGTTTCACCCCA +
Preference number: 5 (lower is better)
Translates to: SRSKPATLPWGFTPAAVNSKPAT*PWGFTP
Trigger: TGGGGTGAAACCCCAGGGCAAGGTGGCTGGCTTTGA...GTTCACCGCAGCTGGGGTGAAACCCCAGGGCAAGGTGGCTGGCTTTGATCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000636214.1
CDS-3UTR CAA 90 bp CTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAGGACCACAGCCTCCACCTaGGCCTTGAACTCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: LAASGFVLSMATRFPCFRTTAST*ALNSSA
Trigger: AGCCGAGGAGTTCAAGGCCAAGGTGGAGGCTGTGGT...CCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp CGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGCTGAAGGGCAGGCCAAGGTaGAGGGCAAACAGGCGATCG +
Preference number: 5 (lower is better)
Translates to: RRLGLCCRWRPVSLASGLKGRPR*RANRRS
Trigger: CGATCGCCTGTTTGCCCTCAACCTTGGCCTGCCCTT...CAGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CAA 90 bp TCACACAGCGCTGCCAGGAGCCTAGCGTGTCCCTGTTCACGTGGACATATCCGGCCGGCTGCTGGCCACTaGAGAAAGAACTCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: SHSAARSLACPCSRGHIRPAAGH*RKNSSG
Trigger: GCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGG...CCGGATATGTCCACGTGAACAGGGACACGCTAGGCTCCTGGCAGCGCTGTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp CCCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGGACACGAGGTGCTTCTaGAGAAAGGTGGACTTCCCG +
Preference number: 5 (lower is better)
Translates to: PSLGSTHSRNGISRMAEKDTRCF*RKVDFP
Trigger: CGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTC...CTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CAA 90 bp CCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCGACACGAGGTGCTTCTaGAGAAAGGTGGACTTCCCG +
Preference number: 5 (lower is better)
Translates to: PASAPPIAGTGSPGWQRSDTRCF*RKVDFP
Trigger: CGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTC...GCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CAA 90 bp ACACTGGACGTACCTGGCGCGGCTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCGACACGAGGTGCTTCTaGAGAAAGGTGGACTTCCCG +
Preference number: 5 (lower is better)
Translates to: TLDVPGAARGVWVCVVDGDTRCF*RKVDFP
Trigger: CGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTC...GCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTACGTCCAGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000625216.2
ENST00000627232.2
CDS-3UTR CAA 90 bp AGATGCTGTCCCCGATGGATATGGGCGTGCCGTCGTTGGCCTGCTCCTGCAGATGGCGACCCGTTTCCCTaGCTTCAGGGCTGTCTCACA +
Preference number: 5 (lower is better)
Translates to: RCCPRWIWACRRWPAPADGDPFP*LQGCLT
Trigger: TGTGAGACAGCCCTGAAGCAAGGGAAACGGGTCGCC...ATCTGCAGGAGCAGGCCAACGACGGCACGCCCATATCCATCGGGGACAGCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp CTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCCTTCATCTCGAAACCGGTTGTaGTGGCGCGCCTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LGSTHSRNGISRMAEKPSSRNRL*WRACSR
Trigger: TCTGGAGCAGGCGCGCCACAACAACCGGTTTCGAGA...TGAAGGCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000593946.5
ENST00000597965.2
ENST00000625216.2
ENST00000627232.2
CDS TCA 90 bp TCCCCAAATCCCATCCCCAGGCCTTGCTGGCCCTTGCAGAGGCACTaGTACCTGTTTCACTGCCACTGTCCGGGTCTCAGGATCTGCGAC +
Preference number: 5 (lower is better)
Translates to: SPNPIPRPCWPLQRH*YLFHCHCPGLRICD
Trigger: GTCGCAGATCCTGAGACCCGGACAGTGGCAGTGAAACAGGTATCAGTGCCTCTGCAAGGGCCAGCAAGGCCTGGGGATGGGATTTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595792.1
ENST00000626274.2
ENST00000629088.1
CDS GCA 90 bp CGTTTCCCTTGCTTCAGGGCTGTCTCACACGTGGTCACACAGCGCTaGCAGGAGCCTAGCGTGTCCTGGGGACACGAGAGGTCACAAACA +
Preference number: 5 (lower is better)
Translates to: RFPCFRAVSHVVTQR*QEPSVSWGHERSQT
Trigger: TGTTTGTGACCTCTCGTGTCCCCAGGACACGCTAGGCTCCTGGCAGCGCTGTGTGACCACGTGTGAGACAGCCCTGAAGCAAGGGAAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593706.3
CDS-3UTR CAA 90 bp CCAGCCTCGGCTCCACCCATAGCCGGAACGGGATCTCCAGGATGGCAGAGAAGCAGTGGGTGGAGGCCATaGACCAAATACAGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: PASAPPIAGTGSPGWQRSSGWRP*TKYSVS
Trigger: GGACACACTGTATTTGGTCAATGGCCTCCACCCACT...GCTTCTCTGCCATCCTGGAGATCCCGTTCCGGCTATGGGTGGAGCCGAGGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000600910.5
ENST00000627232.2
CDS-3UTR CAA 90 bp GCTGGCCACTTGAGAAAGAACTCCTCAGGCGTGGCGAAGGGCAGGCCAAGGTTGGAGAAACAGCGTTTATaGTGGAGGGGAGCTGGGCGG +
Preference number: 5 (lower is better)
Translates to: AGHLRKNSSGVAKGRPRLEKQRL*WRGAGR
Trigger: CCGCCCAGCTCCCCTCCACAATAAACGCTGTTTCTC...CAACCTTGGCCTGCCCTTCGCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS TCA 90 bp GTACCCTGTTCACGTGGACATATCCGGCCGACACGAGGTGCTTCTTaGGAAAGGTGGACTTCCCGGCCCCAGGGAATCCCACTGCGACAA +
Preference number: 5 (lower is better)
Translates to: VPCSRGHIRPTRGAS*ERWTSRPQGIPLRQ
Trigger: TTGTCGCAGTGGGATTCCCTGGGGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGGATATGTCCACGTGAACAGGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600910.5
CDS GCA 90 bp ACTGGACGTACCCTGTTCACGTGGACATATCCGGCCGACACGAGGTaGTTCTTGAGAAAGGTGGACTTCCCGGCCCCAGGGAATCCCACT +
Preference number: 5 (lower is better)
Translates to: TGRTLFTWTYPADTR*FLRKVDFPAPGNPT
Trigger: AGTGGGATTCCCTGGGGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGGATATGTCCACGTGAACAGGGTACGTCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600910.5
CDS GCA 90 bp CCTAGCGTGTCCCTGTTCACGTGGACATATCCGGCCGACACGAGGTaGTTCTTGAGAAAGGTGGACTTCCCGGCGGATCAAAGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: PSVSLFTWTYPADTR*FLRKVDFPADQRLG
Trigger: TCCCAGCCTTTGATCCGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGGATATGTCCACGTGAACAGGGACACGCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625216.2
CDS CCA 90 bp GTAGTTGAGGGGTTAACTCCCAGCTGCAGAAAGAGAGGGAGGAGCTaGGACTGGCTCCGCCCCCACCGGGAGCTTCCTCCAATCAAATAC +
Preference number: 5 (lower is better)
Translates to: VVEGLTPSCRKRGRS*DWLRPHRELPPIKY
Trigger: GTATTTGATTGGAGGAAGCTCCCGGTGGGGGCGGAGCCAGTCCCAGCTCCTCCCTCTCTTTCTGCAGCTGGGAGTTAACCCCTCAACTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625299.1
CDS-3UTR CAA 90 bp TCAAAGCCAGCCACCTTGCCCTGGGGTTTCACCCCAGCTGCGGTGAACACTAGCATCTCTCTTCTCATCTaGGGACACCAGAGGGGTGCC +
Preference number: 5 (lower is better)
Translates to: SKPATLPWGFTPAAVNTSISLLI*GHQRGA
Trigger: GGCACCCCTCTGGTGTCCCAAGATGAGAAGAGAGAT...GCTAGTGTTCACCGCAGCTGGGGTGAAACCCCAGGGCAAGGTGGCTGGCTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR CAA 90 bp GCGCCCGATGCTCATCTGGTTGGTGAAGATCACCAGCTTGTAGCCCTCGGCTTCGCGTCTGGGTTTGTGTaGTCGATGGCGACCCGTTTC +
Preference number: 5 (lower is better)
Translates to: APDAHLVGEDHQLVALGFASGFV*SMATRF
Trigger: GAAACGGGTCGCCATCGACAACACAAACCCAGACGC...GAAGCCGAGGGCTACAAGCTGGTGATCTTCACCAACCAGATGAGCATCGGGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp CTCGGATCAAAGGCTGGGAGCTCGAAGCCGGCTGCTGGCCACTTGAGAAAGAACGCGTCTGGGTTTGTGTaGTCGATGGCGACCCGTTTC +
Preference number: 5 (lower is better)
Translates to: LGSKAGSSKPAAGHLRKNASGFV*SMATRF
Trigger: GAAACGGGTCGCCATCGACAACACAAACCCAGACGC...GTTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp GGCCGACACGAGGTGCTTCTTGAGAAAGGTGGACTTCCCGGCCCCAGGGAATCCGGGTGGAGTCAGGATTaGCATCCTTGTGTGATTGGG +
Preference number: 5 (lower is better)
Translates to: GRHEVLLEKGGLPGPRESGWSQD*HPCVIG
Trigger: CCCAATCACACAAGGATGCAAATCCTGACTCCACCC...GGATTCCCTGGGGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS TCA 90 bp TGTCCCTGTTCACGTGGACATATCCGGCCGACACGAGGTGCTTCTTaGGAAAGGTGGACTTCCCGGCGGATCAAAGGCTGGGAGCTCGAA +
Preference number: 5 (lower is better)
Translates to: CPCSRGHIRPTRGAS*ERWTSRRIKGWELE
Trigger: TTCGAGCTCCCAGCCTTTGATCCGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGGATATGTCCACGTGAACAGGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625216.2
CDS-3UTR CAA 90 bp TCCGGGTCTCAGGATCTGCGACCAGCTCCACTGAGGATTGGAGGGGTGGAGTCAAGTGGGTGGAGGCCATaGACCAAATACAGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: SGSQDLRPAPLRIGGVESSGWRP*TKYSVS
Trigger: GGACACACTGTATTTGGTCAATGGCCTCCACCCACT...TGACTCCACCCCTCCAATCCTCAGTGGAGCTGGTCGCAGATCCTGAGACCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR CAA 90 bp GGCTCGCGGCGTCTGGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAAGTGGGTGGAGGCCATaGACCAAATACAGTGTGTCC +
Preference number: 5 (lower is better)
Translates to: GSRRLGLCCRWRPVSLASSGWRP*TKYSVS
Trigger: GGACACACTGTATTTGGTCAATGGCCTCCACCCACT...TGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp GTGGTCACACAGCGCTGCCAGGAGCCTAGCGTGTCCCTGTTCACGTGGACATATATCTCTCTTCTCATCTaGGGACACCAGAGGGGTGCC +
Preference number: 5 (lower is better)
Translates to: VVTQRCQEPSVSLFTWTYISLLI*GHQRGA
Trigger: GGCACCCCTCTGGTGTCCCAAGATGAGAAGAGAGAT...ATATGTCCACGTGAACAGGGACACGCTAGGCTCCTGGCAGCGCTGTGTGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp TTGAGAAAGGTGGACTTCCCGGCCCCAGGGAATCCCACTGCGACAACCACCTCCCCGATGCTCATCTGGTaGGTGAAGATCACCAGCTTG +
Preference number: 5 (lower is better)
Translates to: LRKVDFPAPGNPTATTTSPMLIW*VKITSL
Trigger: CAAGCTGGTGATCTTCACCAACCAGATGAGCATCGG...GGAGGTGGTTGTCGCAGTGGGATTCCCTGGGGCCGGGAAGTCCACCTTTCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp GATGCTCATCTGGTTGGTGAAGATCACCAGCTTGTAGCCCTCGGCTTCCAGCTCACCACAGCCTCCACCTaGGCCTTGAACTCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: DAHLVGEDHQLVALGFQLTTAST*ALNSSA
Trigger: AGCCGAGGAGTTCAAGGCCAAGGTGGAGGCTGTGGT...GAGCTGGAAGCCGAGGGCTACAAGCTGGTGATCTTCACCAACCAGATGAGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000627232.2
ENST00000636214.1
CDS-3UTR CAA 90 bp CTCGGATCAAAGGCTGGGAGCTCGAAGCCGGCTGCTGGCCACTTGAGAAAGAACGACACGAGGTGCTTCTaGAGAAAGGTGGACTTCCCG +
Preference number: 5 (lower is better)
Translates to: LGSKAGSSKPAAGHLRKNDTRCF*RKVDFP
Trigger: CGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTC...GTTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000627232.2
CDS-3UTR CAA 90 bp GGCAGAGAGGCCCTGAGCGGGAGACAGTCCTCGGATCAAAGGCTGGGAGCTCGATCAGGATTTGCATCCTaGTGTGATTGGGTCCCTCAT +
Preference number: 5 (lower is better)
Translates to: GREALSGRQSSDQRLGARSGFAS*CDWVPH
Trigger: ATGAGGGACCCAATCACACAAGGATGCAAATCCTGA...TCGAGCTCCCAGCCTTTGATCCGAGGACTGTCTCCCGCTCAGGGCCTCTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR CAA 90 bp CTTCCAGCTCTCGGAGCTTACGGGGAATCTCTGGGTACAAGATCCTCCAGTCACTCTCCCAGCCGGGGTTaGACTTCCGCATACGCTTCT +
Preference number: 5 (lower is better)
Translates to: LPALGAYGESLGTRSSSHSPSRG*TSAYAS
Trigger: AGAAGCGTATGCGGAAGTCAAACCCCGGCTGGGAGA...GTGACTGGAGGATCTTGTACCCAGAGATTCCCCGTAAGCTCCGAGAGCTGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000636214.1
CDS-3UTR CAA 90 bp CTTCCCAGAGCGTGTGGTGATGAGCGTCCCGTCCAGATCAAAGCCAGCCACCTTCCGATGCTCATCTGGTaGGTGAAGATCACCAGCTTG +
Preference number: 5 (lower is better)
Translates to: LPRACGDERPVQIKASHLPMLIW*VKITSL
Trigger: CAAGCTGGTGATCTTCACCAACCAGATGAGCATCGG...AAGGTGGCTGGCTTTGATCTGGACGGGACGCTCATCACCACACGCTCTGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000636214.1
CDS-3UTR CAA 90 bp GCTTCCAGCTCTCGGAGCTTACGGGGAATCTCTGGGTACAAGATCCTCCAGTCATGGCCTGCTTCAGGCTaGAGTTCTGGAGCACTTCCG +
Preference number: 5 (lower is better)
Translates to: ASSSRSLRGISGYKILQSWPASG*SSGALP
Trigger: CGGAAGTGCTCCAGAACTCAAGCCTGAAGCAGGCCA...TGACTGGAGGATCTTGTACCCAGAGATTCCCCGTAAGCTCCGAGAGCTGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR CAA 90 bp GGATTGGAGGGGTGGAGTCAGGATTTGCATCCTTGTGTGATTGGGTCCCTCATTATCTCTCGAAACCGGTaGTTGTGGCGCGCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GLEGWSQDLHPCVIGSLIISRNR*LWRACS
Trigger: GGAGCAGGCGCGCCACAACAACCGGTTTCGAGAGAT...AATGAGGGACCCAATCACACAAGGATGCAAATCCTGACTCCACCCCTCCAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593946.5
CDS-3UTR CAA 90 bp CTTCCCAGAGCGTGTGGTGATGAGCGTCCCGTCCAGATCAAAGCCAGCCACCTTCCTCCGTTAGCAGATTaGCCTCTTTCCACCTTGACT +
Preference number: 5 (lower is better)
Translates to: LPRACGDERPVQIKASHLPPLAD*PLSTLT
Trigger: AGTCAAGGTGGAAAGAGGCAAATCTGCTAACGGAGG...AAGGTGGCTGGCTTTGATCTGGACGGGACGCTCATCACCACACGCTCTGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636214.1
CDS TCA 90 bp TCCACTGAGGATTGGAGGGGTGGAGTCAGGATTTGCATCCTTGTGTaGTTGGGTCCCTCATTTCTGGGGAGTGTGGCCTGCTTCAGGCTT +
Preference number: 5 (lower is better)
Translates to: STEDWRGGVRICILV*LGPSFLGSVACFRL
Trigger: AAGCCTGAAGCAGGCCACACTCCCCAGAAATGAGGGACCCAATCACACAAGGATGCAAATCCTGACTCCACCCCTCCAATCCTCAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000595792.1
ENST00000598020.3
CDS TCA 90 bp TCCACTGAGGATTGGAGGGGTGGAGTCAGGATTTGCATCCTTGTGTaGTTGGGTCCCTCATTTCTGGGGAGTGTGGCCTGCTTCAGGCTA +
Preference number: 5 (lower is better)
Translates to: STEDWRGGVRICILV*LGPSFLGSVACFRL
Trigger: TAGCCTGAAGCAGGCCACACTCCCCAGAAATGAGGGACCCAATCACACAAGGATGCAAATCCTGACTCCACCCCTCCAATCCTCAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594661.5
CDS CCA 90 bp GTGGAGTCAGGATTTGCATCCTTGTGTGATTGGGTCCCTCATTTCTaGGGAGTGTGGCCTGCTTCAGGCTTGAGTTCTGGAGCACTTCCG +
Preference number: 5 (lower is better)
Translates to: VESGFASLCDWVPHF*GVWPASGLSSGALP
Trigger: CGGAAGTGCTCCAGAACTCAAGCCTGAAGCAGGCCACACTCCCCAGAAATGAGGGACCCAATCACACAAGGATGCAAATCCTGACTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000595792.1
ENST00000598020.3
CDS CCA 90 bp CTGAGGATTGGAGGGGTGGAGTCAGGATTTGCATCCTTGTGTGATTaGGTCCCTCATTTCTGGGGAGTGTGGCCTGCTTCAGGCTTGAGT +
Preference number: 5 (lower is better)
Translates to: LRIGGVESGFASLCD*VPHFWGVWPASGLS
Trigger: ACTCAAGCCTGAAGCAGGCCACACTCCCCAGAAATGAGGGACCCAATCACACAAGGATGCAAATCCTGACTCCACCCCTCCAATCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000595792.1
ENST00000598020.3
CDS CCA 90 bp CTGAGGATTGGAGGGGTGGAGTCAGGATTTGCATCCTTGTGTGATTaGGTCCCTCATTTCTGGGGAGTGTGGCCTGCTTCAGGCTATAGC +
Preference number: 5 (lower is better)
Translates to: LRIGGVESGFASLCD*VPHFWGVWPASGYS
Trigger: GCTATAGCCTGAAGCAGGCCACACTCCCCAGAAATGAGGGACCCAATCACACAAGGATGCAAATCCTGACTCCACCCCTCCAATCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594661.5
CDS-3UTR CAA 90 bp TCCAGATCAAAGCCAGCCACCTTGCCCTGGGGTTTCACCCCAGCTGCGGTGAACTTGCCTCTTTCCACCTaGACTTCTAATTTTCATCCC +
Preference number: 5 (lower is better)
Translates to: SRSKPATLPWGFTPAAVNLPLST*TSNFHP
Trigger: GGGATGAAAATTAGAAGTCAAGGTGGAAAGAGGCAA...GTTCACCGCAGCTGGGGTGAAACCCCAGGGCAAGGTGGCTGGCTTTGATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636214.1
CDS-3UTR CAA 90 bp TGGAGTCAGGATTTGCATCCTTGTGTGATTGGGTCCCTCATTTCTGGGGAGTGTTGGCCTGCTTCAGGCTaGAGTTCTGGAGCACTTCCG +
Preference number: 5 (lower is better)
Translates to: WSQDLHPCVIGSLISGECWPASG*SSGALP
Trigger: CGGAAGTGCTCCAGAACTCAAGCCTGAAGCAGGCCA...ACACTCCCCAGAAATGAGGGACCCAATCACACAAGGATGCAAATCCTGACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS CCA 90 bp ATAATAGATTTGGGGCGGCAAAAGCCTGGTCATACCCTGTTCACGTaGACATATCCGGCCGACACGAGGTGCTTCTTGAGAAAGGTGGAC +
Preference number: 5 (lower is better)
Translates to: IIDLGRQKPGHTLFT*TYPADTRCFLRKVD
Trigger: GTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGGATATGTCCACGTGAACAGGGTATGACCAGGCTTTTGCCGCCCCAAATCTATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593706.3
CDS CCA 90 bp AGGTGGAGATGGGAACTTTATAATAGATTTGGGGCGGCAAAAGCCTaGTCATACCCTGTTCACGTGGACATATCCGGCCGACACGAGGTG +
Preference number: 5 (lower is better)
Translates to: RWRWELYNRFGAAKA*SYPVHVDISGRHEV
Trigger: CACCTCGTGTCGGCCGGATATGTCCACGTGAACAGGGTATGACCAGGCTTTTGCCGCCCCAAATCTATTATAAAGTTCCCATCTCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593706.3
CDS CCA 90 bp CTCCACAGGATCATTTTTCTCTTGACGAAGGTCGTCGCCTGTTTCTaGATTTCCCGATGGCCTGAGCATCATCCGCGCAGTGAACATCCT +
Preference number: 5 (lower is better)
Translates to: LHRIIFLLTKVVACF*ISRWPEHHPRSEHP
Trigger: AGGATGTTCACTGCGCGGATGATGCTCAGGCCATCGGGAAATCCAGAAACAGGCGACGACCTTCGTCAAGAGAAAAATGATCCTGTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594661.5
ENST00000637897.1
CDS CCA 90 bp GTGGAGTCAGGATTTGCATCCTTGTGTGATTGGGTCCCTCATTTCTaGGGAGTGTGGCCTGCTTCAGGCTATAGCATCCAGGGAGTAAGA +
Preference number: 5 (lower is better)
Translates to: VESGFASLCDWVPHF*GVWPASGYSIQGVR
Trigger: TCTTACTCCCTGGATGCTATAGCCTGAAGCAGGCCACACTCCCCAGAAATGAGGGACCCAATCACACAAGGATGCAAATCCTGACTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594661.5
CDS-3UTR CAA 90 bp GTTGAGGGGTTAACTCCCAGCTGTTTCACTGCCACTGTCCGGGTCTCAGGATCTTCAGGATTTGCATCCTaGTGTGATTGGGTCCCTCAT +
Preference number: 5 (lower is better)
Translates to: VEGLTPSCFTATVRVSGSSGFAS*CDWVPH
Trigger: ATGAGGGACCCAATCACACAAGGATGCAAATCCTGA...AGATCCTGAGACCCGGACAGTGGCAGTGAAACAGCTGGGAGTTAACCCCTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS-3UTR CAA 90 bp AGGATTGGAGGGGTGGAGTCAGGATTTGCATCCTTGTGTGATTGGGTCCCTCATGGGTGGAGTCAGGATTaGCATCCTTGTGTGATTGGG +
Preference number: 5 (lower is better)
Translates to: RIGGVESGFASLCDWVPHGWSQD*HPCVIG
Trigger: CCCAATCACACAAGGATGCAAATCCTGACTCCACCC...ATGAGGGACCCAATCACACAAGGATGCAAATCCTGACTCCACCCCTCCAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593946.5
ENST00000598020.3
CDS CCA 90 bp GGATTTGCATCCTTGTGTGATTGGGTCCCTCATTTCTGGGGAGTGTaGCCTGCTTCAGGCTATAGCATCCAGGGAGTAAGAGGCAGTTTA +
Preference number: 5 (lower is better)
Translates to: GFASLCDWVPHFWGV*PASGYSIQGVRGSL
Trigger: TAAACTGCCTCTTACTCCCTGGATGCTATAGCCTGAAGCAGGCCACACTCCCCAGAAATGAGGGACCCAATCACACAAGGATGCAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594661.5
CDS GCA 90 bp TGCAGTAGCCAGATAGTGGCACTAGGATTGCCTGACACTGGTCCTTaGAAGGGACAGGGAGGTACTTTTCTCTACAGAATTGGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: CSSQIVALGLPDTGP*KGQGGTFLYRIGFL
Trigger: GAGGAAACCAATTCTGTAGAGAAAAGTACCTCCCTGTCCCTTGCAAGGACCAGTGTCAGGCAATCCTAGTGCCACTATCTGGCTACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594661.5
CDS GCA 90 bp GGAGTAAGAGGCAGTTTATTTCTACATGGGATTGGCTCCTTGACATaGAGTAGCCAGATAGTGGCACTAGGATTGCCTGACACTGGTCCT +
Preference number: 5 (lower is better)
Translates to: GVRGSLFLHGIGSLT*SSQIVALGLPDTGP
Trigger: AGGACCAGTGTCAGGCAATCCTAGTGCCACTATCTGGCTACTGCATGTCAAGGAGCCAATCCCATGTAGAAATAAACTGCCTCTTACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594661.5
CDS GCA 72 bp TTCCGACCAGGGAGGTCCTGCCCGAGGTGCCCCGCCTaGAACCCGGCCGGCGGCGGTCGGTTCCTCGGCGGA +
Preference number: 6 (lower is better)
Translates to: FRPGRSCPRCPA*NPAGGGRFLGG
Trigger: TCCGCCGAGGAACCGACCGCCGCCGGCCGGGTTGCAGGCGGGGCACCTCGGGCAGGACCTCCCTGGTCGGAA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322344.8
ENST00000596726.3
ENST00000600573.5
CDS GCA 72 bp GCTTGGGCTCACGGCCACTTCCGACCAGGGAGGTCCTaGCCGAGGTGCCCCGCCTGCAACCCGGCCGGCGGC +
Preference number: 6 (lower is better)
Translates to: AWAHGHFRPGRS*PRCPACNPAGG
Trigger: GCCGCCGGCCGGGTTGCAGGCGGGGCACCTCGGGCAGGACCTCCCTGGTCGGAAGTGGCCGTGAGCCCAAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322344.8
ENST00000595792.1
ENST00000600573.5
ENST00000600910.5
ENST00000626274.2
CDS GCA 72 bp ATCCTGGGTGCCGGCCACTTCCGACCAGGGAGGTCCTaGCCGAGGTGCCCCGCCTGCAACCCGGCCGGCGGC +
Preference number: 6 (lower is better)
Translates to: ILGAGHFRPGRS*PRCPACNPAGG
Trigger: GCCGCCGGCCGGGTTGCAGGCGGGGCACCTCGGGCAGGACCTCCCTGGTCGGAAGTGGCCGGCACCCAGGAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596726.3
CDS GCA 72 bp GGGAGGGAGCAGGGCTCGGACCCGCTCCGAGCGGGATaGAGGCGGTCTGGGATGCAGGCGGCAGCTGTAGGA +
Preference number: 6 (lower is better)
Translates to: GREQGSDPLRAG*RRSGMQAAAVG
Trigger: TCCTACAGCTGCCGCCTGCATCCCAGACCGCCTGCATCCCGCTCGGAGCGGGTCCGAGCCCTGCTCCCTCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629179.1
CDS CCA 72 bp GCCGCAGGCCACCTACGGCCCCGCGGTCACGCTACCTaGCGCGGCTCGCGGCGTCTGGGTTTGTGTTGTCGA +
Preference number: 6 (lower is better)
Translates to: AAGHLRPRGHAT*RGSRRLGLCCR
Trigger: TCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTAGCGTGACCGCGGGGCCGTAGGTGGCCTGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595081.5
ENST00000599454.5
ENST00000601816.3
CDS CCA 72 bp AAGCAGCGGCAGGGGACGCCCGCGGCTCGGGCACACTaGACGTACCTGTGGGGGAAGGAGCTGGATGTGCAG +
Preference number: 6 (lower is better)
Translates to: KQRQGTPAARAH*TYLWGKELDVQ
Trigger: CTGCACATCCAGCTCCTTCCCCCACAGGTACGTCCAGTGTGCCCGAGCCGCGGGCGTCCCCTGCCGCTGCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000595081.5
ENST00000599454.5
ENST00000601816.3
CDS CCA 72 bp GGGGTGTCCGGGCTGAGCGGGCTCACCCGGTTGTTGTaGCGCGCCTGCTCCAGAGTGGCGGTGAAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: GVSGLSGLTRLL*RACSRVAVKRK
Trigger: CTTCCTCTTCACCGCCACTCTGGAGCAGGCGCGCCACAACAACCGGGTGAGCCCGCTCAGCCCGGACACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601816.3
CDS CAA 90 bp CGGCCCCGCGGTCACGCTACCTGGCGCGGCTCGCGGCGTCTGGGTTaGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGCTGTCT +
Preference number: 6 (lower is better)
Translates to: RPRGHATWRGSRRLG*CCRWRPVSLASGLS
Trigger: AGACAGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTAGCGTGACCGCGGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595081.5
ENST00000599454.5
ENST00000601816.3
CDS TCA 72 bp GGTTGGAGGGATGCTGGTCCCTGTGGTGCTGTCTGGTaGCACCACGCCCTGTGCCTGCCAGGCCGGCTGCGT +
Preference number: 6 (lower is better)
Translates to: GWRDAGPCGAVW*HHALCLPGRLR
Trigger: ACGCAGCCGGCCTGGCAGGCACAGGGCGTGGTGTCACCAGACAGCACCACAGGGACCAGCATCCCTCCAACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596624.1
CDS CCA 72 bp CCCGCGGTCACGCTACCTGGCGCGGCTCGCGGCGTCTaGGTTTGTGTTGTCGATGGCGACCCGTTTCCCTTG +
Preference number: 6 (lower is better)
Translates to: PAVTLPGAARGV*VCVVDGDPFPL
Trigger: CAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTAGCGTGACCGCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595081.5
ENST00000599454.5
ENST00000601816.3
CDS GCA 72 bp TCGCCCATCCTGGGTGCCGGCCTTCATCTCTCTTGCTaGAACGCGAGGCTCAGGCCGGTAGCGGGGACTGGA +
Preference number: 6 (lower is better)
Translates to: SPILGAGLHLSC*NARLRPVAGTG
Trigger: TCCAGTCCCCGCTACCGGCCTGAGCCTCGCGTTGCAGCAAGAGAGATGAAGGCCGGCACCCAGGATGGGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599543.3
ENST00000636214.1
CDS GCA 72 bp GCTTGGGCTCACGGCCACTTCCGACCAGGGAGGTCCTaGCCGAGGTGCCCCGCCTTCATCTCTCTTGCTGCA +
Preference number: 6 (lower is better)
Translates to: AWAHGHFRPGRS*PRCPAFISLAA
Trigger: TGCAGCAAGAGAGATGAAGGCGGGGCACCTCGGGCAGGACCTCCCTGGTCGGAAGTGGCCGTGAGCCCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638016.1
CDS CAA 90 bp CCGCGGTCACGCTACCTGGCGCGGCTCGCGGCGTCTGGGTTTGTGTaGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGCTGTCTCACAC +
Preference number: 6 (lower is better)
Translates to: PRSRYLARLAASGFV*SMATRFPCFRAVSH
Trigger: GTGTGAGACAGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTAGCGTGACCGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595081.5
ENST00000599454.5
ENST00000601816.3
CDS TCA 72 bp TCCTGGGTGCCGGCCTGGGGAGCAGGTAAACGGGCTTaGGCGGCGCACAGCCCCAATTTGCTGCAGGAAGTC +
Preference number: 6 (lower is better)
Translates to: SWVPAWGAGKRA*AAHSPNLLQEV
Trigger: GACTTCCTGCAGCAAATTGGGGCTGTGCGCCGCTCAAGCCCGTTTACCTGCTCCCCAGGCCGGCACCCAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596014.5
CDS GCA 72 bp CACAGGAACAGGACACTTACCCCCAGGGAATCCCACTaGGACAACCACCTCCGGGCTGGCGCTCAGGAGGGC +
Preference number: 6 (lower is better)
Translates to: HRNRTLTPRESH*DNHLRAGAQEG
Trigger: GCCCTCCTGAGCGCCAGCCCGGAGGTGGTTGTCGCAGTGGGATTCCCTGGGGGTAAGTGTCCTGTTCCTGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593706.3
CDS GCA 72 bp CTCTCATCGCTGGTGTCATCCGTGTCGTGGAAAAGGTaGGCTGGGAGGGAGCAGGGCTCGGACCCGCTCCGA +
Preference number: 6 (lower is better)
Translates to: LSSLVSSVSWKR*AGREQGSDPLR
Trigger: TCGGAGCGGGTCCGAGCCCTGCTCCCTCCCAGCGCACCTTTTCCACGACACGGATGACACCAGCGATGAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629179.1
CDS CCA 72 bp GGAGCCCACGGCATGATGCCGTGGTTGGAGGGATGCTaGTCCCTGTGGTGCTGTCTGGTGACACCACGCCCT +
Preference number: 6 (lower is better)
Translates to: GAHGMMPWLEGC*SLWCCLVTPRP
Trigger: AGGGCGTGGTGTCACCAGACAGCACCACAGGGACCAGCATCCCTCCAACCACGGCATCATGCCGTGGGCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596624.1
CDS CAA 72 bp CGCTACCTGGCGCGGCTCGCGGCGTCTGGGTTTGTGTaGTCGATGGCGACCCGTTTCCCTTGCTTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: RYLARLAASGFV*SMATRFPCFRA
Trigger: AGCCCTGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595081.5
ENST00000599454.5
ENST00000601816.3
CDS CAA 90 bp CCCGGCGGATCAAAGGCTGGGAGCTCGAAGCCGGCTGCTGGCCACTaGAGAAAGAACTCCTCAGGCGTGGCGAAGGGCAGGCCAAGGTTG +
Preference number: 6 (lower is better)
Translates to: PGGSKAGSSKPAAGH*RKNSSGVAKGRPRL
Trigger: CAACCTTGGCCTGCCCTTCGCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625216.2
CDS TCA 72 bp GTACAAGATCCTACGGCAGGTATGAAGCGGCAGGGGTaGCCCGGGGCCAGAGGTGGACTCCAGGCCTCACTC +
Preference number: 6 (lower is better)
Translates to: VQDPTAGMKRQG*PGARGGLQASL
Trigger: GAGTGAGGCCTGGAGTCCACCTCTGGCCCCGGGTCACCCCTGCCGCTTCATACCTGCCGTAGGATCTTGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594661.5
ENST00000629179.1
CDS GCA 72 bp CATGGAGCCCACGGCATGATGCCGTGGTTGGAGGGATaGTGGTCCCTGTGGTGCTGTCTGGTGACACCACGC +
Preference number: 6 (lower is better)
Translates to: HGAHGMMPWLEG*WSLWCCLVTPR
Trigger: GCGTGGTGTCACCAGACAGCACCACAGGGACCAGCATCCCTCCAACCACGGCATCATGCCGTGGGCTCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596624.1
CDS GCA 72 bp TCCCGGCGGATCAAAGGCTGGGAGCTCGAAGCCGGCTaGTGGCCACTTGAGAAAGAACTCCTCAGGCGTGGC +
Preference number: 6 (lower is better)
Translates to: SRRIKGWELEAG*WPLEKELLRRG
Trigger: GCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGCCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625216.2
CDS CCA 72 bp AGGTGCTTCTTGAGAAAGGTGGACTTCCCGGCTGTGTaGGGGGCAGTGTCGGTGGGTGGCCTAGGACCCAGG +
Preference number: 6 (lower is better)
Translates to: RCFLRKVDFPAV*GAVSVGGLGPR
Trigger: CCTGGGTCCTAGGCCACCCACCGACACTGCCCCCCACACAGCCGGGAAGTCCACCTTTCTCAAGAAGCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593706.3
CDS CCA 72 bp CTGTGCCTGGCTCATGGAGCCCACGGCATGATGCCGTaGTTGGAGGGATGCTGGTCCCTGTGGTGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: LCLAHGAHGMMP*LEGCWSLWCCL
Trigger: CAGACAGCACCACAGGGACCAGCATCCCTCCAACCACGGCATCATGCCGTGGGCTCCATGAGCCAGGCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596624.1
CDS CAA 72 bp GGTCACGCTACCTGGCGCGGCTCGCGGCGTCTGGGTTaGTGTTGTCGATGGCGACCCGTTTCCCTTGCTTCA +
Preference number: 6 (lower is better)
Translates to: GHATWRGSRRLG*CCRWRPVSLAS
Trigger: TGAAGCAAGGGAAACGGGTCGCCATCGACAACACAAACCCAGACGCCGCGAGCCGCGCCAGGTAGCGTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595081.5
ENST00000599454.5
ENST00000601816.3
CDS CAA 72 bp TGCCTGGCTCATGGAGCCCACGGCATGATGCCGTGGTaGGAGGGATGCTGGTCCCTGTGGTGCTGTCTGGTG +
Preference number: 6 (lower is better)
Translates to: CLAHGAHGMMPW*EGCWSLWCCLV
Trigger: CACCAGACAGCACCACAGGGACCAGCATCCCTCCAACCACGGCATCATGCCGTGGGCTCCATGAGCCAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596624.1
CDS CAA 90 bp GTTAGGCTGTGCCTGGCTCATGGAGCCCACGGCATGATGCCGTGGTaGGAGGGATGCTGGTCCCTGTGGTGCTGTCTGGTGACACCACGC +
Preference number: 6 (lower is better)
Translates to: VRLCLAHGAHGMMPW*EGCWSLWCCLVTPR
Trigger: GCGTGGTGTCACCAGACAGCACCACAGGGACCAGCATCCCTCCAACCACGGCATCATGCCGTGGGCTCCATGAGCCAGGCACAGCCTAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596624.1
CDS CCA 72 bp GTGGTCACACAGCGCTGCCAGGAGCCTAGCGTGTCCTaGGGACACGAGAGGTCACAAACAGATCGGCAGACC +
Preference number: 6 (lower is better)
Translates to: VVTQRCQEPSVS*GHERSQTDRQT
Trigger: GGTCTGCCGATCTGTTTGTGACCTCTCGTGTCCCCAGGACACGCTAGGCTCCTGGCAGCGCTGTGTGACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593706.3
CDS CCA 72 bp CGGCGGATCAAAGGCTGGGAGCTCGAAGCCGGCTGCTaGCCACTTGAGAAAGAACTCCTCAGGCGTGGCGAA +
Preference number: 6 (lower is better)
Translates to: RRIKGWELEAGC*PLEKELLRRGE
Trigger: TTCGCCACGCCTGAGGAGTTCTTTCTCAAGTGGCCAGCAGCCGGCTTCGAGCTCCCAGCCTTTGATCCGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625216.2
CDS GCA 72 bp ACCCTGTTCACGTGGACATATCCGGCCGACACGAGGTaGTTCTTGAGAAAGGTGGACTTCCCGGCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: TLFTWTYPADTR*FLRKVDFPAPG
Trigger: CCCTGGGGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGGATATGTCCACGTGAACAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600910.5
CDS CAA 90 bp ACCCGGGGCCAGAGGTGGACTCCAGGCCTCACTCACTCCCTTGTTTaGCCTCTTATCACCTCCAGTCACTGGGGCCAGTGGGAAAGACCT +
Preference number: 6 (lower is better)
Translates to: TRGQRWTPGLTHSLV*PLITSSHWGQWERP
Trigger: AGGTCTTTCCCACTGGCCCCAGTGACTGGAGGTGATAAGAGGCAAAACAAGGGAGTGAGTGAGGCCTGGAGTCCACCTCTGGCCCCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594661.5
ENST00000629179.1
CDS CAA 90 bp CGTACCCTGTTCACGTGGACATATCCGGCCGACACGAGGTGCTTCTaGAGAAAGGTGGACTTCCCGGCCCCAGGGAATCCCACTGCGACA +
Preference number: 6 (lower is better)
Translates to: RTLFTWTYPADTRCF*RKVDFPAPGNPTAT
Trigger: TGTCGCAGTGGGATTCCCTGGGGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGGATATGTCCACGTGAACAGGGTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600910.5
CDS TCA 72 bp CTCCAACCCCGGCTTCAACTCCTGGGTCCCGGTAGTTaGGGGGTTAACTCCCAGCTGCAGAAAGAGAGGGAG +
Preference number: 6 (lower is better)
Translates to: LQPRLQLLGPGS*GVNSQLQKERE
Trigger: CTCCCTCTCTTTCTGCAGCTGGGAGTTAACCCCTCAACTACCGGGACCCAGGAGTTGAAGCCGGGGTTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000625299.1
CDS GCA 72 bp CCTCCCCAAATCCCATCCCCAGGCCTTGCTGGCCCTTaGAGAGGCACTGATACCTGTTTCACTGCCACTGTC +
Preference number: 6 (lower is better)
Translates to: PPQIPSPGLAGP*RGTDTCFTATV
Trigger: GACAGTGGCAGTGAAACAGGTATCAGTGCCTCTGCAAGGGCCAGCAAGGCCTGGGGATGGGATTTGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000595792.1
ENST00000626274.2
ENST00000629088.1
CDS CAA 90 bp GTGTCCCTGTTCACGTGGACATATCCGGCCGACACGAGGTGCTTCTaGAGAAAGGTGGACTTCCCGGCGGATCAAAGGCTGGGAGCTCGA +
Preference number: 6 (lower is better)
Translates to: VSLFTWTYPADTRCF*RKVDFPADQRLGAR
Trigger: TCGAGCTCCCAGCCTTTGATCCGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGGATATGTCCACGTGAACAGGGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625216.2
CDS TCA 72 bp TCACGTGGACATATCCGGCCGACACGAGGTGCTTCTTaGGAAAGGTGGACTTCCCGGCGGATCAAAGGCTGG +
Preference number: 6 (lower is better)
Translates to: SRGHIRPTRGAS*ERWTSRRIKGW
Trigger: CCAGCCTTTGATCCGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGGATATGTCCACGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625216.2
CDS GCA 72 bp ACCCTGTTCACGTGGACATATCCGGCCGACACGAGGTaGTTCTTGAGAAAGGTGGACTTCCCGGCTGTGTGG +
Preference number: 6 (lower is better)
Translates to: TLFTWTYPADTR*FLRKVDFPAVW
Trigger: CCACACAGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGGATATGTCCACGTGAACAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593706.3
CDS GCA 72 bp AGAGGTGGACTCCAGGCCTCACTCACTCCCTTGTTTTaGCTCTTATCACCTCCAGTCACTGGGGCCAGTGGG +
Preference number: 6 (lower is better)
Translates to: RGGLQASLTPLF*LLSPPVTGASG
Trigger: CCCACTGGCCCCAGTGACTGGAGGTGATAAGAGGCAAAACAAGGGAGTGAGTGAGGCCTGGAGTCCACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594661.5
ENST00000629179.1
CDS CCA 72 bp CTCGGCTTCCAGCTCTCGGAGCTTACGGGGAATCTCTaGGTACAAGATCCTACGGCAGGTATGAAGCGGCAG +
Preference number: 6 (lower is better)
Translates to: LGFQLSELTGNL*VQDPTAGMKRQ
Trigger: CTGCCGCTTCATACCTGCCGTAGGATCTTGTACCCAGAGATTCCCCGTAAGCTCCGAGAGCTGGAAGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594661.5
ENST00000629179.1
CDS CAA 72 bp CAGAGGTGGACTCCAGGCCTCACTCACTCCCTTGTTTaGCCTCTTATCACCTCCAGTCACTGGGGCCAGTGG +
Preference number: 6 (lower is better)
Translates to: QRWTPGLTHSLV*PLITSSHWGQW
Trigger: CCACTGGCCCCAGTGACTGGAGGTGATAAGAGGCAAAACAAGGGAGTGAGTGAGGCCTGGAGTCCACCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594661.5
ENST00000629179.1
CDS GCA 72 bp TCCCTGTTCACGTGGACATATCCGGCCGACACGAGGTaGTTCTTGAGAAAGGTGGACTTCCCGGCGGATCAA +
Preference number: 6 (lower is better)
Translates to: SLFTWTYPADTR*FLRKVDFPADQ
Trigger: TTGATCCGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGGATATGTCCACGTGAACAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625216.2
CDS CCA 72 bp TTGGGGCGGCAAAAGCCTGGTCATACCCTGTTCACGTaGACATATCCGGCCGACACGAGGTGCTTCTTGAGA +
Preference number: 6 (lower is better)
Translates to: LGRQKPGHTLFT*TYPADTRCFLR
Trigger: TCTCAAGAAGCACCTCGTGTCGGCCGGATATGTCCACGTGAACAGGGTATGACCAGGCTTTTGCCGCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593706.3
CDS CCA 72 bp TTGACGAAGGTCGTCGCCTGTTTCTGGATTTCCCGATaGCCTGAGCATCATCCGCGCAGTGAACATCCTCCC +
Preference number: 6 (lower is better)
Translates to: LTKVVACFWISR*PEHHPRSEHPP
Trigger: GGGAGGATGTTCACTGCGCGGATGATGCTCAGGCCATCGGGAAATCCAGAAACAGGCGACGACCTTCGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594661.5
ENST00000637897.1
CDS CAA 72 bp TTCACGTGGACATATCCGGCCGACACGAGGTGCTTCTaGAGAAAGGTGGACTTCCCGGCGGATCAAAGGCTG +
Preference number: 6 (lower is better)
Translates to: FTWTYPADTRCF*RKVDFPADQRL
Trigger: CAGCCTTTGATCCGCCGGGAAGTCCACCTTTCTCAAGAAGCACCTCGTGTCGGCCGGATATGTCCACGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625216.2
CDS CCA 72 bp TCCTTGTGTGATTGGGTCCCTCATTTCTGGGGAGTGTaGCCTGCTTCAGGCTTGAGTTCTGGAGCACTTCCG +
Preference number: 6 (lower is better)
Translates to: SLCDWVPHFWGV*PASGLSSGALP
Trigger: CGGAAGTGCTCCAGAACTCAAGCCTGAAGCAGGCCACACTCCCCAGAAATGAGGGACCCAATCACACAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000595792.1
ENST00000598020.3
CDS CCA 72 bp GGAGGGGTGGAGTCAGGATTTGCATCCTTGTGTGATTaGGTCCCTCATTTCTGGGGAGTGTGGCCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: GGVESGFASLCD*VPHFWGVWPAS
Trigger: TGAAGCAGGCCACACTCCCCAGAAATGAGGGACCCAATCACACAAGGATGCAAATCCTGACTCCACCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000593946.5
ENST00000594661.5
ENST00000595792.1
ENST00000598020.3
CDS CAA 72 bp TCCTTGACATGCAGTAGCCAGATAGTGGCACTAGGATaGCCTGACACTGGTCCTTGCAAGGGACAGGGAGGT +
Preference number: 6 (lower is better)
Translates to: SLTCSSQIVALG*PDTGPCKGQGG
Trigger: ACCTCCCTGTCCCTTGCAAGGACCAGTGTCAGGCAATCCTAGTGCCACTATCTGGCTACTGCATGTCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594661.5
CDS CAA 90 bp GGGATTGGCTCCTTGACATGCAGTAGCCAGATAGTGGCACTAGGATaGCCTGACACTGGTCCTTGCAAGGGACAGGGAGGTACTTTTCTC +
Preference number: 6 (lower is better)
Translates to: GIGSLTCSSQIVALG*PDTGPCKGQGGTFL
Trigger: GAGAAAAGTACCTCCCTGTCCCTTGCAAGGACCAGTGTCAGGCAATCCTAGTGCCACTATCTGGCTACTGCATGTCAAGGAGCCAATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594661.5
CDS TCA 72 bp TCCCCAACAGTACCTGTAGCCATACATGACCATGTCTaGCACGGGGATATGAGAGGAGTCCGTCATCTCTCG +
Preference number: 6 (lower is better)
Translates to: SPTVPVAIHDHV*HGDMRGVRHLS
Trigger: CGAGAGATGACGGACTCCTCTCATATCCCCGTGTCAGACATGGTCATGTATGGCTACAGGTACTGTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597965.2
CDS CCA 72 bp GGATTTGCATCCTTGTGTGATTGGGTCCCTCATTTCTaGGGAGTGTGGCCTGCTTCAGGCTTGAGTTCTGGA +
Preference number: 6 (lower is better)
Translates to: GFASLCDWVPHF*GVWPASGLSSG
Trigger: TCCAGAACTCAAGCCTGAAGCAGGCCACACTCCCCAGAAATGAGGGACCCAATCACACAAGGATGCAAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000593946.5
ENST00000595792.1
ENST00000598020.3
CDS CCA 72 bp TCCTTGTGTGATTGGGTCCCTCATTTCTGGGGAGTGTaGCCTGCTTCAGGCTATAGCATCCAGGGAGTAAGA +
Preference number: 6 (lower is better)
Translates to: SLCDWVPHFWGV*PASGYSIQGVR
Trigger: TCTTACTCCCTGGATGCTATAGCCTGAAGCAGGCCACACTCCCCAGAAATGAGGGACCCAATCACACAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594661.5
CDS CCA 72 bp GGATTTGCATCCTTGTGTGATTGGGTCCCTCATTTCTaGGGAGTGTGGCCTGCTTCAGGCTATAGCATCCAG +
Preference number: 6 (lower is better)
Translates to: GFASLCDWVPHF*GVWPASGYSIQ
Trigger: CTGGATGCTATAGCCTGAAGCAGGCCACACTCCCCAGAAATGAGGGACCCAATCACACAAGGATGCAAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594661.5
CDS CAA 90 bp AGGATCTGCGACCAGCTCCATTTTCTCCACAGGATCATTTTTCTCTaGACGAAGGTCGTCGCCTGTTTCTGGATTTCCCGATGGCCTGAG +
Preference number: 6 (lower is better)
Translates to: RICDQLHFLHRIIFL*TKVVACFWISRWPE
Trigger: CTCAGGCCATCGGGAAATCCAGAAACAGGCGACGACCTTCGTCAAGAGAAAAATGATCCTGTGGAGAAAATGGAGCTGGTCGCAGATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637897.1
CDS CCA 72 bp ATCATTTTTCTCTTGACGAAGGTCGTCGCCTGTTTCTaGATTTCCCGATGGCCTGAGCATCATCCGCGCAGT +
Preference number: 6 (lower is better)
Translates to: IIFLLTKVVACF*ISRWPEHHPRS
Trigger: ACTGCGCGGATGATGCTCAGGCCATCGGGAAATCCAGAAACAGGCGACGACCTTCGTCAAGAGAAAAATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594661.5
ENST00000637897.1
CDS CCA 72 bp TGGGAACTTTATAATAGATTTGGGGCGGCAAAAGCCTaGTCATACCCTGTTCACGTGGACATATCCGGCCGA +
Preference number: 6 (lower is better)
Translates to: WELYNRFGAAKA*SYPVHVDISGR
Trigger: TCGGCCGGATATGTCCACGTGAACAGGGTATGACCAGGCTTTTGCCGCCCCAAATCTATTATAAAGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593706.3
CDS CAA 90 bp CCCAACCTAGCGACATTTACTTTTCTCCACAGGATCATTTTTCTCTaGACGAAGGTCGTCGCCTGTTTCTGGATTTCCCGATGGCCTGAG +
Preference number: 6 (lower is better)
Translates to: PNLATFTFLHRIIFL*TKVVACFWISRWPE
Trigger: CTCAGGCCATCGGGAAATCCAGAAACAGGCGACGACCTTCGTCAAGAGAAAAATGATCCTGTGGAGAAAAGTAAATGTCGCTAGGTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594661.5
CDS GCA 72 bp CAGATAGTGGCACTAGGATTGCCTGACACTGGTCCTTaGAAGGGACAGGGAGGTACTTTTCTCTACAGAATT +
Preference number: 6 (lower is better)
Translates to: QIVALGLPDTGP*KGQGGTFLYRI
Trigger: AATTCTGTAGAGAAAAGTACCTCCCTGTCCCTTGCAAGGACCAGTGTCAGGCAATCCTAGTGCCACTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594661.5
CDS GCA 72 bp GGCAGTTTATTTCTACATGGGATTGGCTCCTTGACATaGAGTAGCCAGATAGTGGCACTAGGATTGCCTGAC +
Preference number: 6 (lower is better)
Translates to: GSLFLHGIGSLT*SSQIVALGLPD
Trigger: GTCAGGCAATCCTAGTGCCACTATCTGGCTACTGCATGTCAAGGAGCCAATCCCATGTAGAAATAAACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594661.5
CDS CAA 72 bp CAGTTGAGAGGTGGAGATGGGAACTTTATAATAGATTaGGGGCGGCAAAAGCCTGGTCATACCCTGTTCACG +
Preference number: 6 (lower is better)
Translates to: QLRGGDGNFIID*GRQKPGHTLFT
Trigger: CGTGAACAGGGTATGACCAGGCTTTTGCCGCCCCAAATCTATTATAAAGTTCCCATCTCCACCTCTCAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593706.3
CDS CAA 90 bp ATCCAGGGAGTAAGAGGCAGTTTATTTCTACATGGGATTGGCTCCTaGACATGCAGTAGCCAGATAGTGGCACTAGGATTGCCTGACACT +
Preference number: 6 (lower is better)
Translates to: IQGVRGSLFLHGIGS*TCSSQIVALGLPDT
Trigger: AGTGTCAGGCAATCCTAGTGCCACTATCTGGCTACTGCATGTCAAGGAGCCAATCCCATGTAGAAATAAACTGCCTCTTACTCCCTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594661.5