RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PNKD (Homo sapiens)

Ensembl gene IDs: ENSG00000127838

Ensembl transcript IDs: ENST00000248451.7, ENST00000258362.7, ENST00000273077.9, ENST00000436005.2, ENST00000469689.1, ENST00000472650.1, ENST00000483797.1, ENST00000494954.1

Found 331 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGGGAAGGGCAAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATaGGGCCTCCTGACGGAGAAGCTAACAGCAGCCCCCATGTCCTTG +
Preference number: 1 (lower is better)
Translates to: GGRARWTLGSRATVR*GLLTEKLTAAPMSL
Trigger: CAAGGACATGGGGGCTGCTGTTAGCTTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTTGCCCTTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR CCA 90 bp ACGTCAGAGCCCCCTCCTGCCAGCCGGATGGGGGCCTGGATCCAGTaGGAAATCACATGGGAATATGGCTGGCAAACTGCAAAGGGCCAG +
Preference number: 1 (lower is better)
Translates to: TSEPPPASRMGAWIQ*EITWEYGWQTAKGQ
Trigger: CTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR TCA 90 bp AGAGCCCGAGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTaGCTCAAGGTACACCTGCCTGAGGACCACAGGGTTCCTCGCTGT +
Preference number: 1 (lower is better)
Translates to: RARGQALTQEKRAPG*LKVHLPEDHRVPRC
Trigger: ACAGCGAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCTCGGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR TCA 90 bp GACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTaGGGACCACAGGGTTCCTCGCTGTGGCTCCAAAGGGATCTCGAC +
Preference number: 1 (lower is better)
Translates to: DTGKEGSWLTQGTPA*GPQGSSLWLQRDLD
Trigger: GTCGAGATCCCTTTGGAGCCACAGCGAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR TCA 90 bp ACTGTGGGGCTCCACACTCCAGACTCCAGTGTCTCCTTAGCCCAATaGGGAGGTTTCCTTGGCAATCAGGACCCTCCTTCTTCCAGGCTG +
Preference number: 1 (lower is better)
Translates to: TVGLHTPDSSVSLAQ*GGFLGNQDPPSSRL
Trigger: CAGCCTGGAAGAAGGAGGGTCCTGATTGCCAAGGAAACCTCCTCATTGGGCTAAGGAGACACTGGAGTCTGGAGTGTGGAGCCCCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR GCA 90 bp GAGGCTGTGGGAAGAGGGCAGAGTCTCAGGACACCAGAGTCCAGCTaGCCATCTGAGTGGTGCTTTTGTAAGGCATCACACTTGAGGCCA +
Preference number: 1 (lower is better)
Translates to: EAVGRGQSLRTPESS*PSEWCFCKASHLRP
Trigger: TGGCCTCAAGTGTGATGCCTTACAAAAGCACCACTCAGATGGGCAGCTGGACTCTGGTGTCCTGAGACTCTGCCCTCTTCCCACAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR CCA 90 bp CACTCCAGACTCCAGTGTCTCCTTAGCCCAATGAGGAGGTTTCCTTaGCAATCAGGACCCTCCTTCTTCCAGGCTGTAGGGAGGCCACTG +
Preference number: 1 (lower is better)
Translates to: HSRLQCLLSPMRRFP*QSGPSFFQAVGRPL
Trigger: CAGTGGCCTCCCTACAGCCTGGAAGAAGGAGGGTCCTGATTGCCAAGGAAACCTCCTCATTGGGCTAAGGAGACACTGGAGTCTGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR TCA 90 bp AGTCCAGCTGCCCATCTGAGTGGTGCTTTTGTAAGGCATCACACTTaGGGCCACTGTGAGGGGCTGAGCTTCTTTCCCAACCATGGATGG +
Preference number: 1 (lower is better)
Translates to: SPAAHLSGAFVRHHT*GHCEGLSFFPNHGW
Trigger: CCATCCATGGTTGGGAAAGAAGCTCAGCCCCTCACAGTGGCCTCAAGTGTGATGCCTTACAAAAGCACCACTCAGATGGGCAGCTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp GGTCGGGCCAGGTCTGGGACCCAGAGCTGCCATGCACTCCCGCGCTCTCACAGAGGGATGATGCCCGCTTaGGTGCCGATGGAGGTGGTG +
Preference number: 2 (lower is better)
Translates to: GRARSGTQSCHALPRSHRGMMPA*VPMEVV
Trigger: CACCACCTCCATCGGCACCCAAGCGGGCATCATCCC...TCTGTGAGAGCGCGGGAGTGCATGGCAGCTCTGGGTCCCAGACCTGGCCCGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR GCA 90 bp CGTCAGAGCCCCCTCCTGCCAGCCGGATGGGGGCCTGGATCCAGTGGGAAATCACAGCCCCCATGTCCTTaGTGCCGTCCCAGGAGTAGG +
Preference number: 2 (lower is better)
Translates to: RQSPLLPAGWGPGSSGKSQPPCP*CRPRSR
Trigger: CCTACTCCTGGGACGGCAGCAAGGACATGGGGGCTG...TGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR CAA 90 bp GGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTTTCCTCTTGCCGTaGATGAGGCAGCCTCGCGCTGCGGGGTTCCCAGCCTCCAACAGG +
Preference number: 2 (lower is better)
Translates to: GRVWRCPETPPFLLP*MRQPRAAGFPASNR
Trigger: CCTGTTGGAGGCTGGGAACCCCGCAGCGCGAGGCTGCCTCATCAACGGCAAGAGGAAAGGAGGGGTCTCGGGACATCTCCAGACCCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR CAA 90 bp CCAGTTGGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTTTCCTCTaGCCGTTGATGAGGCAGCCTCGCGCTGCGGGGTTCCCAGCCTCC +
Preference number: 2 (lower is better)
Translates to: PVGRVWRCPETPPFL*PLMRQPRAAGFPAS
Trigger: GGAGGCTGGGAACCCCGCAGCGCGAGGCTGCCTCATCAACGGCAAGAGGAAAGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR TCA 90 bp GGTCGGGCCAGGTCTGGGACCCAGAGCTGCCATGCACTCCCGCGCTCTCACAGATGCAAGGAGAGCATGTaGCCTGCAAGACTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: GRARSGTQSCHALPRSHRCKESM*PARLWG
Trigger: GCCCCACAGTCTTGCAGGTCACATGCTCTCCTTGCA...TCTGTGAGAGCGCGGGAGTGCATGGCAGCTCTGGGTCCCAGACCTGGCCCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR GCA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCGTGGCGGCCTCCCCATaGGGGGAGTGGGCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: SATREALTKCRGSLEGRGVAASP*GEWAGL
Trigger: CAGCCCAGCCCACTCCCCGCATGGGGAGGCCGCCAC...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp AGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTGAGGACCACAGGGTTCCTCGGGTCGGGCCAGGTCTaGGACCCAGAGCTGCCATGC +
Preference number: 2 (lower is better)
Translates to: RGLLADSRYTCLRTTGFLGSGQV*DPELPC
Trigger: GCATGGCAGCTCTGGGTCCCAGACCTGGCCCGACCC...GAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR TCA 90 bp CGTCAGAGCCCCCTCCTGCCAGCCGGATGGGGGCCTGGATCCAGTGGGAAATCACACTTGAGGCCACTGTaGGGGGCTGAGCTTCTTTCC +
Preference number: 2 (lower is better)
Translates to: RQSPLLPAGWGPGSSGKSHLRPL*GAELLS
Trigger: GGAAAGAAGCTCAGCCCCTCACAGTGGCCTCAAGTG...TGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR GCA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTGTGGCGGCCTCCCCATaGGGGGAGTGGGCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPVAASP*GEWAGL
Trigger: CAGCCCAGCCCACTCCCCGCATGGGGAGGCCGCCAC...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR GCA 90 bp GAGGGGGCCTTTGAGGGGATCGTGAGAGATGAACTTGCCAGGCAGACAAGGCAGGAGGCAGCCTCGCGCTaGGGGGTTCCCAGCCTCCAA +
Preference number: 2 (lower is better)
Translates to: EGAFEGIVRDELARQTRQEAASR*GVPSLQ
Trigger: TTGGAGGCTGGGAACCCCGCAGCGCGAGGCTGCCTC...CTGCCTTGTCTGCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGGCCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp CGTCAGAGCCCCCTCCTGCCAGCCGGATGGGGGCCTGGATCCAGTGGGAAATCACCAGTTGGTAGGGTCTaGAGATGTCCCGAGACCCCT +
Preference number: 2 (lower is better)
Translates to: RQSPLLPAGWGPGSSGKSPVGRV*RCPETP
Trigger: AGGGGTCTCGGGACATCTCCAGACCCTACCAACTGG...TGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp GAGGAGGGGACCCTCCCAGTTGGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTCAGGCCCCCTTCTTTTaGCCTCACAGTCTCATCGCC +
Preference number: 2 (lower is better)
Translates to: EEGTLPVGRVWRCPETPPQAPFF*PHSLIA
Trigger: GGCGATGAGACTGTGAGGCCAAAAGAAGGGGGCCTG...AGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGGGAGGGTCCCCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp CGTCAGAGCCCCCTCCTGCCAGCCGGATGGGGGCCTGGATCCAGTGGGAAATCAACAGGAAAGGTTAGATaGAGGAAGGCGGGCAGACGG +
Preference number: 2 (lower is better)
Translates to: RQSPLLPAGWGPGSSGKSTGKVR*RKAGRR
Trigger: CCGTCTGCCCGCCTTCCTCCATCTAACCTTTCCTGT...TGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR GCA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTGAGGCAGCCTCGCGCTaGGGGGTTCCCAGCCTCCAA +
Preference number: 2 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPEAASR*GVPSLQ
Trigger: TTGGAGGCTGGGAACCCCGCAGCGCGAGGCTGCCTC...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCATGAGGTGTTGGTGGTaGCGGCCTCCCCATGCGGGG +
Preference number: 2 (lower is better)
Translates to: SATREALTKCRGSLEGRGMRCWW*RPPHAG
Trigger: CCCCGCATGGGGAGGCCGCCACCACCAACACCTCAT...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp GACCTGCAAGACTGTGGGGCTCCACACTCCAGACTCCAGTGTCTCCTTAGCCCAGGGATGATGCCCGCTTaGGTGCCGATGGAGGTGGTG +
Preference number: 2 (lower is better)
Translates to: DLQDCGAPHSRLQCLLSPGMMPA*VPMEVV
Trigger: CACCACCTCCATCGGCACCCAAGCGGGCATCATCCC...TGGGCTAAGGAGACACTGGAGTCTGGAGTGTGGAGCCCCACAGTCTTGCAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp AGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTGAGGACCACAGGGTTCCTCGGCCAAAGAGGACCGTaGCTGTCTCTCCCCTGGCAA +
Preference number: 2 (lower is better)
Translates to: RGLLADSRYTCLRTTGFLGQRGP*LSLPWQ
Trigger: TTGCCAGGGGAGAGACAGCCACGGTCCTCTTTGGCC...GAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp GGTCGGGCCAGGTCTGGGACCCAGAGCTGCCATGCACTCCCGCGCTCTCACAGAGGGGCCTGGATCCAGTaGGAAATCACATGGGAATAT +
Preference number: 2 (lower is better)
Translates to: GRARSGTQSCHALPRSHRGAWIQ*EITWEY
Trigger: ATATTCCCATGTGATTTCCCACTGGATCCAGGCCCC...TCTGTGAGAGCGCGGGAGTGCATGGCAGCTCTGGGTCCCAGACCTGGCCCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTCTCCTGCCAGCCGGATaGGGGCCTGGATCCAGTGGG +
Preference number: 2 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPLLPAG*GPGSSG
Trigger: CCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAG...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR GCA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCGACCCAGAGCTGCCATaGACTCCCGCGCTCTCACAG +
Preference number: 2 (lower is better)
Translates to: SATREALTKCRGSLEGRGDPELP*TPALSQ
Trigger: CTGTGAGAGCGCGGGAGTGCATGGCAGCTCTGGGTC...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp GAGGGGCTGAGCTTCTTTCCCAACCATGGATGGGGGAAGGGCAAGATGGACCCTATGATGAGGTGTTGGTaGTGGCGGCCTCCCCATGCG +
Preference number: 2 (lower is better)
Translates to: EGLSFFPNHGWGKGKMDPMMRCW*WRPPHA
Trigger: CGCATGGGGAGGCCGCCACCACCAACACCTCATCAT...AGGGTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAGCTCAGCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp CGTCAGAGCCCCCTCCTGCCAGCCGGATGGGGGCCTGGATCCAGTGGGAAATCAGCTCTGTCTGAAAAATaGCTTTGCAGGGATGGGTGG +
Preference number: 2 (lower is better)
Translates to: RQSPLLPAGWGPGSSGKSALSEK*LCRDGW
Trigger: CCACCCATCCCTGCAAAGCCATTTTTCAGACAGAGC...TGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp GAGGGGGCCTTTGAGGGGATCGTGAGAGATGAACTTGCCAGGCAGACAAGGCAGGGCCAAAGAGGACCGTaGCTGTCTCTCCCCTGGCAA +
Preference number: 2 (lower is better)
Translates to: EGAFEGIVRDELARQTRQGQRGP*LSLPWQ
Trigger: TTGCCAGGGGAGAGACAGCCACGGTCCTCTTTGGCC...CTGCCTTGTCTGCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGGCCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR TCA 90 bp GAGGGGGCCTTTGAGGGGATCGTGAGAGATGAACTTGCCAGGCAGACAAGGCAGGCCACTGTGAGGGGCTaGGCTTCTTTCCCAACCATG +
Preference number: 2 (lower is better)
Translates to: EGAFEGIVRDELARQTRQATVRG*ASFPTM
Trigger: CATGGTTGGGAAAGAAGCTCAGCCCCTCACAGTGGC...CTGCCTTGTCTGCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGGCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR TCA 90 bp CGTCAGAGCCCCCTCCTGCCAGCCGGATGGGGGCCTGGATCCAGTGGGAAATCAGAACAAGGGCCAAAATaGGAATACAGCATCGGCCAA +
Preference number: 2 (lower is better)
Translates to: RQSPLLPAGWGPGSSGKSEQGPK*EYSIGQ
Trigger: TTGGCCGATGCTGTATTCTCATTTTGGCCCTTGTTC...TGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR TCA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCCCCGAGGGCAGGCTTTaGCACAGGAAAAGAGGGCTC +
Preference number: 2 (lower is better)
Translates to: SATREALTKCRGSLEGRGPEGRL*HRKRGL
Trigger: GAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCTCGGG...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR TCA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGGCAGAGGCCAGATCATaGGGGGAAACTGAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: TREALTKCRGSLEGRGTGAEARS*GETEGR
Trigger: CCTGCCCTCAGTTTCCCCTCATGATCTGGCCTCTGC...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR GCA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCCCCCCATGTCCTTGCTaGCGTCCCAGGAGTAGGGAA +
Preference number: 2 (lower is better)
Translates to: SATREALTKCRGSLEGRGPPCPC*RPRSRE
Trigger: TTCCCTACTCCTGGGACGGCAGCAAGGACATGGGGG...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR GCA 90 bp CGTCAGAGCCCCCTCCTGCCAGCCGGATGGGGGCCTGGATCCAGTGGGAAATCATGCCCATCTGAGTGGTaGTTTTGTAAGGCATCACAC +
Preference number: 2 (lower is better)
Translates to: RQSPLLPAGWGPGSSGKSCPSEW*FCKASH
Trigger: GTGTGATGCCTTACAAAAGCACCACTCAGATGGGCA...TGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp AAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATGAGGCCTCCTGACGGAGAAATGATGAGGTGTTGGTaGTGGCGGCCTCCCCATGCG +
Preference number: 2 (lower is better)
Translates to: KMDPGFQGYSEMRPPDGEMMRCW*WRPPHA
Trigger: CGCATGGGGAGGCCGCCACCACCAACACCTCATCAT...TTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp GAGGGGGCCTTTGAGGGGATCGTGAGAGATGAACTTGCCAGGCAGACAAGGCAGAGGATGATGAGGTGTTaGTGGTGGCGGCCTCCCCAT +
Preference number: 2 (lower is better)
Translates to: EGAFEGIVRDELARQTRQRMMRC*WWRPPH
Trigger: ATGGGGAGGCCGCCACCACCAACACCTCATCATCCT...CTGCCTTGTCTGCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGGCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp GAGGGGCTGAGCTTCTTTCCCAACCATGGATGGGGGAAGGGCAAGATGGACCCTCAGGCCCCCTTCTTTTaGCCTCACAGTCTCATCGCC +
Preference number: 2 (lower is better)
Translates to: EGLSFFPNHGWGKGKMDPQAPFF*PHSLIA
Trigger: GGCGATGAGACTGTGAGGCCAAAAGAAGGGGGCCTG...AGGGTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAGCTCAGCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp CGTCAGAGCCCCCTCCTGCCAGCCGGATGGGGGCCTGGATCCAGTGGGAAATCAAGCTGCCCATCTGAGTaGTGCTTTTGTAAGGCATCA +
Preference number: 2 (lower is better)
Translates to: RQSPLLPAGWGPGSSGKSSCPSE*CFCKAS
Trigger: TGATGCCTTACAAAAGCACCACTCAGATGGGCAGCT...TGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp GAGGGGGCCTTTGAGGGGATCGTGAGAGATGAACTTGCCAGGCAGACAAGGCAGAGCCGGATGGGGGCCTaGATCCAGTGGGAAATCACA +
Preference number: 2 (lower is better)
Translates to: EGAFEGIVRDELARQTRQSRMGA*IQWEIT
Trigger: TGTGATTTCCCACTGGATCCAGGCCCCCATCCGGCT...CTGCCTTGTCTGCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGGCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR TCA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGAGGGCTACAGTGAGATaGGGCCTCCTGACGGAGAAG +
Preference number: 2 (lower is better)
Translates to: TREALTKCRGSLEGRGTGRATVR*GLLTEK
Trigger: CTTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCT...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR TCA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCGTAAGGCATCACACTTaGGGCCACTGTGAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: SATREALTKCRGSLEGRGVRHHT*GHCEGL
Trigger: CAGCCCCTCACAGTGGCCTCAAGTGTGATGCCTTAC...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR GCA 90 bp GAGGGGGCCTTTGAGGGGATCGTGAGAGATGAACTTGCCAGGCAGACAAGGCAGGACTCAAGGTACACCTaGCTGAGGACCACAGGGTTC +
Preference number: 2 (lower is better)
Translates to: EGAFEGIVRDELARQTRQDSRYT*LRTTGF
Trigger: GAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTC...CTGCCTTGTCTGCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGGCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp AGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTGAGGACCACAGGGTTCCTCTTTCCCAACCATGGATaGGGGAAGGGCAAGATGGAC +
Preference number: 2 (lower is better)
Translates to: RGLLADSRYTCLRTTGFLFPNHG*GKGKMD
Trigger: GTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAA...GAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCCAGGGTTCCTCGCTGTaGCTCCAAAGGGATCTCGAC +
Preference number: 2 (lower is better)
Translates to: SATREALTKCRGSLEGRGQGSSL*LQRDLD
Trigger: GTCGAGATCCCTTTGGAGCCACAGCGAGGAACCCTG...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR GCA 90 bp GACCTGCAAGACTGTGGGGCTCCACACTCCAGACTCCAGTGTCTCCTTAGCCCAACACCAGAGTCCAGCTaGCCATCTGAGTGGTGCTTT +
Preference number: 2 (lower is better)
Translates to: DLQDCGAPHSRLQCLLSPTPESS*PSEWCF
Trigger: AAAGCACCACTCAGATGGGCAGCTGGACTCTGGTGT...TGGGCTAAGGAGACACTGGAGTCTGGAGTGTGGAGCCCCACAGTCTTGCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR GCA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGGACTCAAGGTACACCTaGCTGAGGACCACAGGGTTC +
Preference number: 2 (lower is better)
Translates to: TREALTKCRGSLEGRGTGDSRYT*LRTTGF
Trigger: GAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTC...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp GGAAATCACATGGGAATATGGCTGGCAAACTGCAAAGGGCCAGATGAGTGTCAGATGAGGTGTTGGTGGTaGCGGCCTCCCCATGCGGGG +
Preference number: 2 (lower is better)
Translates to: GNHMGIWLANCKGPDECQMRCWW*RPPHAG
Trigger: CCCCGCATGGGGAGGCCGCCACCACCAACACCTCAT...CTGACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGAAAGGTTAGATaGAGGAAGGCGGGCAGACGG +
Preference number: 2 (lower is better)
Translates to: SATREALTKCRGSLEGRGTGKVR*RKAGRR
Trigger: CCGTCTGCCCGCCTTCCTCCATCTAACCTTTCCTGT...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTCAGGGTTCCTCGCTGTaGCTCCAAAGGGATCTCGAC +
Preference number: 2 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPQGSSL*LQRDLD
Trigger: GTCGAGATCCCTTTGGAGCCACAGCGAGGAACCCTG...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR GCA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGACACCAGAGTCCAGCTaGCCATCTGAGTGGTGCTTT +
Preference number: 2 (lower is better)
Translates to: TREALTKCRGSLEGRGTGTPESS*PSEWCF
Trigger: AAAGCACCACTCAGATGGGCAGCTGGACTCTGGTGT...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp GAGGGGGCCTTTGAGGGGATCGTGAGAGATGAACTTGCCAGGCAGACAAGGCAGCTTCTTTCCCAACCATaGATGGGGGAAGGGCAAGAT +
Preference number: 2 (lower is better)
Translates to: EGAFEGIVRDELARQTRQLLSQP*MGEGQD
Trigger: ATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAG...CTGCCTTGTCTGCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGGCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCGGAAAAGAGGGCTCCTaGCTGACTCAAGGTACACCT +
Preference number: 2 (lower is better)
Translates to: SATREALTKCRGSLEGRGGKEGS*LTQGTP
Trigger: AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCC...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR TCA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCGAACAAGGGCCAAAATaGGAATACAGCATCGGCCAA +
Preference number: 2 (lower is better)
Translates to: SATREALTKCRGSLEGRGEQGPK*EYSIGQ
Trigger: TTGGCCGATGCTGTATTCTCATTTTGGCCCTTGTTC...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR GCA 90 bp GGAAATCACATGGGAATATGGCTGGCAAACTGCAAAGGGCCAGATGAGTGTCAGGGAGAGCATGTGACCTaGAAGACTGTGGGGCTCCAC +
Preference number: 2 (lower is better)
Translates to: GNHMGIWLANCKGPDECQGEHVT*KTVGLH
Trigger: GTGGAGCCCCACAGTCTTGCAGGTCACATGCTCTCC...CTGACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR GCA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCATATGGCTGGCAAACTaGAAAGGGCCAGATGAGTGT +
Preference number: 2 (lower is better)
Translates to: SATREALTKCRGSLEGRGIWLAN*KGPDEC
Trigger: ACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATAT...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTATGAGGAGGTTTCCTTaGCAATCAGGACCCTCCTTC +
Preference number: 2 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPMRRFP*QSGPSF
Trigger: GAAGGAGGGTCCTGATTGCCAAGGAAACCTCCTCAT...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CCA 90 bp GGAAATCACATGGGAATATGGCTGGCAAACTGCAAAGGGCCAGATGAGTGTCAGTTTCCCAACCATGGATaGGGGAAGGGCAAGATGGAC +
Preference number: 2 (lower is better)
Translates to: GNHMGIWLANCKGPDECQFPNHG*GKGKMD
Trigger: GTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAA...CTGACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CAA 90 bp GGTCGGGCCAGGTCTGGGACCCAGAGCTGCCATGCACTCCCGCGCTCTCACAGAGGGGATGATGCCCGCTaGGGTGCCGATGGAGGTGGT +
Preference number: 3 (lower is better)
Translates to: GRARSGTQSCHALPRSHRGDDAR*GADGGG
Trigger: ACCACCTCCATCGGCACCCAAGCGGGCATCATCCCC...TCTGTGAGAGCGCGGGAGTGCATGGCAGCTCTGGGTCCCAGACCTGGCCCGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR CCA 72 bp GTGGTGTTAGCGATGAGAAGGATGATGAGGTGTTGGTaGTGGCGGCCTCCCCATGCGGGGAGTGGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: VVLAMRRMMRCW*WRPPHAGSGLG
Trigger: GCCCAGCCCACTCCCCGCATGGGGAGGCCGCCACCACCAACACCTCATCATCCTTCTCATCGCTAACACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CAA 90 bp GAGGGGGCCTTTGAGGGGATCGTGAGAGATGAACTTGCCAGGCAGACAAGGCAGCAAGGAGGGGCCCTTTaGGCCCAGGGCAGAGGCAGA +
Preference number: 3 (lower is better)
Translates to: EGAFEGIVRDELARQTRQQGGAL*AQGRGR
Trigger: TCTGCCTCTGCCCTGGGCCAAAAGGGCCCCTCCTTG...CTGCCTTGTCTGCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGGCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR CCA 72 bp GTGGTGGTGTTAGCGATGAGAAGGATGATGAGGTGTTaGTGGTGGCGGCCTCCCCATGCGGGGAGTGGGCTG +
Preference number: 3 (lower is better)
Translates to: VVVLAMRRMMRC*WWRPPHAGSGL
Trigger: CAGCCCACTCCCCGCATGGGGAGGCCGCCACCACCAACACCTCATCATCCTTCTCATCGCTAACACCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CAA 90 bp AAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATGAGGCCTCCTGACGGAGAAGGGGATGATGCCCGCTaGGGTGCCGATGGAGGTGGT +
Preference number: 3 (lower is better)
Translates to: KMDPGFQGYSEMRPPDGEGDDAR*GADGGG
Trigger: ACCACCTCCATCGGCACCCAAGCGGGCATCATCCCC...TTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR TCA 72 bp GCAAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATaGGGCCTCCTGACGGAGAAGCTAACAGCAGCCCCC +
Preference number: 3 (lower is better)
Translates to: ARWTLGSRATVR*GLLTEKLTAAP
Trigger: GGGGGCTGCTGTTAGCTTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR GCA 72 bp CTTCTGATTTCCAACCTGCACGTCAGAGCCCCCTCCTaGCAGCCGGATGGGGGCCTGGATCCAGTGGGAAAT +
Preference number: 3 (lower is better)
Translates to: LLISNLHVRAPS*QPDGGLDPVGN
Trigger: ATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACGTGCAGGTTGGAAATCAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR CCA 72 bp CCCCCTCCTGCCAGCCGGATGGGGGCCTGGATCCAGTaGGAAATCACATGGGAATATGGCTGGCAAACTGCA +
Preference number: 3 (lower is better)
Translates to: PPPASRMGAWIQ*EITWEYGWQTA
Trigger: TGCAGTTTGCCAGCCATATTCCCATGTGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CAA 90 bp GAGGGGCTGAGCTTCTTTCCCAACCATGGATGGGGGAAGGGCAAGATGGACCCTCCTTTCCTCTTGCCGTaGATGAGGCAGCCTCGCGCT +
Preference number: 3 (lower is better)
Translates to: EGLSFFPNHGWGKGKMDPPFLLP*MRQPRA
Trigger: AGCGCGAGGCTGCCTCATCAACGGCAAGAGGAAAGG...AGGGTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAGCTCAGCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR TCA 72 bp AAAGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTaGGGACCACAGGGTTCCTCGCTGTGGCTCCAAAGG +
Preference number: 3 (lower is better)
Translates to: KEGSWLTQGTPA*GPQGSSLWLQR
Trigger: CCTTTGGAGCCACAGCGAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CAA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCAAGGATGATGAGGTGTaGGTGGTGGCGGCCTCCCCA +
Preference number: 3 (lower is better)
Translates to: SATREALTKCRGSLEGRGKDDEV*VVAASP
Trigger: TGGGGAGGCCGCCACCACCAACACCTCATCATCCTT...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CAA 90 bp GAGGGGCTGAGCTTCTTTCCCAACCATGGATGGGGGAAGGGCAAGATGGACCCTACAGGCCCCCTTCTTTaGGCCTCACAGTCTCATCGC +
Preference number: 3 (lower is better)
Translates to: EGLSFFPNHGWGKGKMDPTGPLL*ASQSHR
Trigger: GCGATGAGACTGTGAGGCCAAAAGAAGGGGGCCTGT...AGGGTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAGCTCAGCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CAA 90 bp AAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATGAGGCCTCCTGACGGAGAACCTTTCCTCTTGCCGTaGATGAGGCAGCCTCGCGCT +
Preference number: 3 (lower is better)
Translates to: KMDPGFQGYSEMRPPDGEPFLLP*MRQPRA
Trigger: AGCGCGAGGCTGCCTCATCAACGGCAAGAGGAAAGG...TTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CAA 90 bp GACCTGCAAGACTGTGGGGCTCCACACTCCAGACTCCAGTGTCTCCTTAGCCCAACCCCTCCTTTCCTCTaGCCGTTGATGAGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: DLQDCGAPHSRLQCLLSPTPPFL*PLMRQP
Trigger: AGGCTGCCTCATCAACGGCAAGAGGAAAGGAGGGGT...TGGGCTAAGGAGACACTGGAGTCTGGAGTGTGGAGCCCCACAGTCTTGCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CAA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCAGGGGACCCTCCCAGTaGGTAGGGTCTGGAGATGTC +
Preference number: 3 (lower is better)
Translates to: SATREALTKCRGSLEGRGRGPSQ*VGSGDV
Trigger: GACATCTCCAGACCCTACCAACTGGGAGGGTCCCCT...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CAA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGAGGGGACCCTCCCAGTaGGTAGGGTCTGGAGATGTC +
Preference number: 3 (lower is better)
Translates to: TREALTKCRGSLEGRGTGRGPSQ*VGSGDV
Trigger: GACATCTCCAGACCCTACCAACTGGGAGGGTCCCCT...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CAA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTAAGGATGATGAGGTGTaGGTGGTGGCGGCCTCCCCA +
Preference number: 3 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPKDDEV*VVAASP
Trigger: TGGGGAGGCCGCCACCACCAACACCTCATCATCCTT...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CAA 90 bp AAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATGAGGCCTCCTGACGGAGAAACCCCTCCTTTCCTCTaGCCGTTGATGAGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: KMDPGFQGYSEMRPPDGETPPFL*PLMRQP
Trigger: AGGCTGCCTCATCAACGGCAAGAGGAAAGGAGGGGT...TTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR TCA 72 bp GGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTaGCTCAAGGTACACCTGCCTGAGGACCACAGGGTT +
Preference number: 3 (lower is better)
Translates to: GQALTQEKRAPG*LKVHLPEDHRV
Trigger: AACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CAA 90 bp AGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTGAGGACCACAGGGTTCCTCAATGAGGAGGTTTCCTaGGCAATCAGGACCCTCCTT +
Preference number: 3 (lower is better)
Translates to: RGLLADSRYTCLRTTGFLNEEVS*AIRTLL
Trigger: AAGGAGGGTCCTGATTGCCAAGGAAACCTCCTCATT...GAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR CCA 72 bp AGCCGGATGGGGGCCTGGATCCAGTGGGAAATCACATaGGAATATGGCTGGCAAACTGCAAAGGGCCAGATG +
Preference number: 3 (lower is better)
Translates to: SRMGAWIQWEIT*EYGWQTAKGQM
Trigger: CATCTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCCCACTGGATCCAGGCCCCCATCCGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR-3UTR CAA 90 bp GAGGGGGCCTTTGAGGGGATCGTGAGAGATGAACTTGCCAGGCAGACAAGGCAGAATGAGGAGGTTTCCTaGGCAATCAGGACCCTCCTT +
Preference number: 3 (lower is better)
Translates to: EGAFEGIVRDELARQTRQNEEVS*AIRTLL
Trigger: AAGGAGGGTCCTGATTGCCAAGGAAACCTCCTCATT...CTGCCTTGTCTGCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGGCCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR GCA 72 bp GGAAGAGGGCAGAGTCTCAGGACACCAGAGTCCAGCTaGCCATCTGAGTGGTGCTTTTGTAAGGCATCACAC +
Preference number: 3 (lower is better)
Translates to: GRGQSLRTPESS*PSEWCFCKASH
Trigger: GTGTGATGCCTTACAAAAGCACCACTCAGATGGGCAGCTGGACTCTGGTGTCCTGAGACTCTGCCCTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR CCA 72 bp CTCCAGTGTCTCCTTAGCCCAATGAGGAGGTTTCCTTaGCAATCAGGACCCTCCTTCTTCCAGGCTGTAGGG +
Preference number: 3 (lower is better)
Translates to: LQCLLSPMRRFP*QSGPSFFQAVG
Trigger: CCCTACAGCCTGGAAGAAGGAGGGTCCTGATTGCCAAGGAAACCTCCTCATTGGGCTAAGGAGACACTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR TCA 72 bp CTCCACACTCCAGACTCCAGTGTCTCCTTAGCCCAATaGGGAGGTTTCCTTGGCAATCAGGACCCTCCTTCT +
Preference number: 3 (lower is better)
Translates to: LHTPDSSVSLAQ*GGFLGNQDPPS
Trigger: AGAAGGAGGGTCCTGATTGCCAAGGAAACCTCCTCATTGGGCTAAGGAGACACTGGAGTCTGGAGTGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR CCA 72 bp AGTCTCAGGACACCAGAGTCCAGCTGCCCATCTGAGTaGTGCTTTTGTAAGGCATCACACTTGAGGCCACTG +
Preference number: 3 (lower is better)
Translates to: SLRTPESSCPSE*CFCKASHLRPL
Trigger: CAGTGGCCTCAAGTGTGATGCCTTACAAAAGCACCACTCAGATGGGCAGCTGGACTCTGGTGTCCTGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR CCA 72 bp CACAGAGGCATGAAACTGCATGTCTTGCTTGGTGAGTaGGGAACTCTAACTAGTCTGGTGGTATTGCTAAAG +
Preference number: 3 (lower is better)
Translates to: HRGMKLHVLLGE*GTLTSLVVLLK
Trigger: CTTTAGCAATACCACCAGACTAGTTAGAGTTCCCCACTCACCAAGCAAGACATGCAGTTTCATGCCTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GGTCGGGCCAGGTCTGGGACCCAGAGCTGCCATGCACTCCCGCGCTCTCACAGAAGCCCTGCCAAGCCATaGTGGGGGCAGGCACGCGCC +
Preference number: 4 (lower is better)
Translates to: GRARSGTQSCHALPRSHRSPAKP*WGQARA
Trigger: GGCGCGTGCCTGCCCCCAGCATGGCTTGGCAGGGCT...TCTGTGAGAGCGCGGGAGTGCATGGCAGCTCTGGGTCCCAGACCTGGCCCGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258362.7
CDS-3UTR GCA 90 bp CGTCAGAGCCCCCTCCTGCCAGCCGGATGGGGGCCTGGATCCAGTGGGAAATCAACCCGACAGTCCCGGTaGCGCCGGCTGAGGTCACGG +
Preference number: 4 (lower is better)
Translates to: RQSPLLPAGWGPGSSGKSTRQSR*RRLRSR
Trigger: CCGTGACCTCAGCCGGCGGCACCGGGACTGTCGGGT...TGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp GGTCGGGCCAGGTCTGGGACCCAGAGCTGCCATGCACTCCCGCGCTCTCACAGACACAGCCCGAGGGTCTaGAGGGTCCACAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: GRARSGTQSCHALPRSHRHSPRV*RVHSHS
Trigger: GCTGTGGCTGTGGACCCTTCAGACCCTCGGGCTGTG...TCTGTGAGAGCGCGGGAGTGCATGGCAGCTCTGGGTCCCAGACCTGGCCCGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GAGGAGGGGACCCTCCCAGTTGGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTACCCGACAGTCCCGGTaGCGCCGGCTGAGGTCACGG +
Preference number: 4 (lower is better)
Translates to: EEGTLPVGRVWRCPETPPTRQSR*RRLRSR
Trigger: CCGTGACCTCAGCCGGCGGCACCGGGACTGTCGGGT...AGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGGGAGGGTCCCCTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GGTCGGGCCAGGTCTGGGACCCAGAGCTGCCATGCACTCCCGCGCTCTCACAGAATGAGGTGTTGGTGGTaGCGGCCTCCCCATGCGGGG +
Preference number: 4 (lower is better)
Translates to: GRARSGTQSCHALPRSHRMRCWW*RPPHAG
Trigger: CCCCGCATGGGGAGGCCGCCACCACCAACACCTCAT...TCTGTGAGAGCGCGGGAGTGCATGGCAGCTCTGGGTCCCAGACCTGGCCCGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GAGGAGGGGACCCTCCCAGTTGGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTATGGGCACGTGCCCTTaGGCTCCAGCCGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: EEGTLPVGRVWRCPETPPMGTCP*APAAAA
Trigger: AGCGGCAGCGGCTGGAGCGCAAGGGCACGTGCCCAT...AGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGGGAGGGTCCCCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp AGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTGAGGACCACAGGGTTCCTCGTGGCGGCCTCCCCATaGGGGGAGTGGGCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RGLLADSRYTCLRTTGFLVAASP*GEWAGL
Trigger: CAGCCCAGCCCACTCCCCGCATGGGGAGGCCGCCAC...GAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GAGGAGGGGACCCTCCCAGTTGGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTCTCCTGCCAGCCGGATaGGGGCCTGGATCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: EEGTLPVGRVWRCPETPPLLPAG*GPGSSG
Trigger: CCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAG...AGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGGGAGGGTCCCCTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp CGTCAGAGCCCCCTCCTGCCAGCCGGATGGGGGCCTGGATCCAGTGGGAAATCACTCTCCCAGGGTAGATaGGCACGTGCCCTTGCGCTC +
Preference number: 4 (lower is better)
Translates to: RQSPLLPAGWGPGSSGKSLSQGR*ARALAL
Trigger: GAGCGCAAGGGCACGTGCCCATCTACCCTGGGAGAG...TGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GAGGAGGGGACCCTCCCAGTTGGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTCTGGGCTGGGGGCGCTaGGGGCATCACTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: EEGTLPVGRVWRCPETPPLGWGR*GHHLLL
Trigger: CAAGAGCAAGTGATGCCCCCAGCGCCCCCAGCCCAG...AGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGGGAGGGTCCCCTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCCCCGGTGCCGCCGGCTaGGGTCACGGTTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SATREALTKCRGSLEGRGPGAAG*GHGSLH
Trigger: GTGGAGGGAACCGTGACCTCAGCCGGCGGCACCGGG...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp AAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATGAGGCCTCCTGACGGAGAACCCGGTGCCGCCGGCTaGGGTCACGGTTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KMDPGFQGYSEMRPPDGEPGAAG*GHGSLH
Trigger: GTGGAGGGAACCGTGACCTCAGCCGGCGGCACCGGG...TTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp GGTCGGGCCAGGTCTGGGACCCAGAGCTGCCATGCACTCCCGCGCTCTCACAGAAGGGCTACAGTGAGATaGGGCCTCCTGACGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GRARSGTQSCHALPRSHRRATVR*GLLTEK
Trigger: CTTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCT...TCTGTGAGAGCGCGGGAGTGCATGGCAGCTCTGGGTCCCAGACCTGGCCCGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp GGTCGGGCCAGGTCTGGGACCCAGAGCTGCCATGCACTCCCGCGCTCTCACAGAAAGAGGGCTCCTGGCTaGCTCAAGGTACACCTGCCT +
Preference number: 4 (lower is better)
Translates to: GRARSGTQSCHALPRSHRKRAPG*LKVHLP
Trigger: AGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCTT...TCTGTGAGAGCGCGGGAGTGCATGGCAGCTCTGGGTCCCAGACCTGGCCCGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp AGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTGAGGACCACAGGGTTCCTCAGCAGCCGCTGGCTGTaGGCCATGAGCAGACCGCGG +
Preference number: 4 (lower is better)
Translates to: RGLLADSRYTCLRTTGFLSSRWL*AMSRPR
Trigger: CCGCGGTCTGCTCATGGCGCACAGCCAGCGGCTGCT...GAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258362.7
CDS-3UTR GCA 90 bp AGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTGAGGACCACAGGGTTCCTCGAGGCAGCCTCGCGCTaGGGGGTTCCCAGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: RGLLADSRYTCLRTTGFLEAASR*GVPSLQ
Trigger: TTGGAGGCTGGGAACCCCGCAGCGCGAGGCTGCCTC...GAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GAGGGGCTGAGCTTCTTTCCCAACCATGGATGGGGGAAGGGCAAGATGGACCCTGTCAGAGCCCCCTCCTaGCAGCCGGATGGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: EGLSFFPNHGWGKGKMDPVRAPS*QPDGGL
Trigger: CAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGAC...AGGGTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAGCTCAGCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGCCTGCCAAGCCATGCTaGGGGCAGGCACGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: TREALTKCRGSLEGRGTGPAKPC*GQARAG
Trigger: GCCGGCGCGTGCCTGCCCCCAGCATGGCTTGGCAGG...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000258362.7
CDS-3UTR CCA 90 bp GAGGAGGGGACCCTCCCAGTTGGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTGGGATGATGCCCGCTTaGGTGCCGATGGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EEGTLPVGRVWRCPETPPGMMPA*VPMEVV
Trigger: CACCACCTCCATCGGCACCCAAGCGGGCATCATCCC...AGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGGGAGGGTCCCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp TTTGGCCTCACAGTCTCATCGCCTGATCCCTCCCCTCCCCTGAGCAGTGTGGGGAGTGCAGAGGTAGCCTaGAGGGGAGGGGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: FGLTVSSPDPSPPLSSVGSAEVA*RGGAQG
Trigger: CCCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACT...CCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
3UTR CAA 72 bp AGGGTCTGGAGATGTCCCGAGACCCCTCCTTTCCTCTaGCCGTTGATGAGGCAGCCTCGCGCTGCGGGGTTC +
Preference number: 4 (lower is better)
Translates to: RVWRCPETPPFL*PLMRQPRAAGF
Trigger: GAACCCCGCAGCGCGAGGCTGCCTCATCAACGGCAAGAGGAAAGGAGGGGTCTCGGGACATCTCCAGACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTGCTGGCTGTGCGCCATaGGCAGACCGCGGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPAGCAP*ADRGGP
Trigger: GGGGCCTCCGCGGTCTGCTCATGGCGCACAGCCAGC...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258362.7
CDS-3UTR TCA 90 bp AAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATGAGGCCTCCTGACGGAGAAGCCAGGGCCCGGATCTaGAGCCGTCCCACGCTGACC +
Preference number: 4 (lower is better)
Translates to: KMDPGFQGYSEMRPPDGEARARI*SRPTLT
Trigger: GGTCAGCGTGGGACGGCTTCAGATCCGGGCCCTGGC...TTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp CGTCAGAGCCCCCTCCTGCCAGCCGGATGGGGGCCTGGATCCAGTGGGAAATCAGCCACTGTGAGGGGCTaGGCTTCTTTCCCAACCATG +
Preference number: 4 (lower is better)
Translates to: RQSPLLPAGWGPGSSGKSATVRG*ASFPTM
Trigger: CATGGTTGGGAAAGAAGCTCAGCCCCTCACAGTGGC...TGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp GAGGAGGGGACCCTCCCAGTTGGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTCCCGAGGGCAGGCTTTaGCACAGGAAAAGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: EEGTLPVGRVWRCPETPPPEGRL*HRKRGL
Trigger: GAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCTCGGG...AGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGGGAGGGTCCCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCGCGGGCCAGCCCTaGCAAGCCATGCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPAAGQP*QAMLGA
Trigger: TGCCCCCAGCATGGCTTGGCAGGGCTGGCCCGCGGC...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258362.7
CDS-3UTR GCA 90 bp CGTCAGAGCCCCCTCCTGCCAGCCGGATGGGGGCCTGGATCCAGTGGGAAATCAGCATGGTCTCTGCATTaGCCTCAAAGGTCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: RQSPLLPAGWGPGSSGKSAWSLH*PQRSAH
Trigger: GTGGGCGGACCTTTGAGGGCAATGCAGAGACCATGC...TGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp TTTGGCCTCACAGTCTCATCGCCTGATCCCTCCCCTCCCCTGAGCAGTGTGGGGTCCAGCCGCTGCCGCTaGACCCACTGCATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: FGLTVSSPDPSPPLSSVGSSRCR*THCIFL
Trigger: GAGGAAGATGCAGTGGGTGCAGCGGCAGCGGCTGGA...CCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GAGGGGCTGAGCTTCTTTCCCAACCATGGATGGGGGAAGGGCAAGATGGACCCTATGGGCACGTGCCCTTaGGCTCCAGCCGCTGCCGCT +
Preference number: 4 (lower is better)
Translates to: EGLSFFPNHGWGKGKMDPMGTCP*APAAAA
Trigger: AGCGGCAGCGGCTGGAGCGCAAGGGCACGTGCCCAT...AGGGTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAGCTCAGCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GAGGGGCTGAGCTTCTTTCCCAACCATGGATGGGGGAAGGGCAAGATGGACCCTGAGGCAGCCTCGCGCTaGGGGGTTCCCAGCCTCCAA +
Preference number: 4 (lower is better)
Translates to: EGLSFFPNHGWGKGKMDPEAASR*GVPSLQ
Trigger: TTGGAGGCTGGGAACCCCGCAGCGCGAGGCTGCCTC...AGGGTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAGCTCAGCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp CGTCAGAGCCCCCTCCTGCCAGCCGGATGGGGGCCTGGATCCAGTGGGAAATCAGGAGAGCATGTGACCTaGAAGACTGTGGGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: RQSPLLPAGWGPGSSGKSGEHVT*KTVGLH
Trigger: GTGGAGCCCCACAGTCTTGCAGGTCACATGCTCTCC...TGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp TTTGGCCTCACAGTCTCATCGCCTGATCCCTCCCCTCCCCTGAGCAGTGTGGGGGACCCAGAGCTGCCATaGACTCCCGCGCTCTCACAG +
Preference number: 4 (lower is better)
Translates to: FGLTVSSPDPSPPLSSVGDPELP*TPALSQ
Trigger: CTGTGAGAGCGCGGGAGTGCATGGCAGCTCTGGGTC...CCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp TTGGCTGGCTCCTTGGTGTGGGGCAGGGTAGGGTTTGGCAACAGCCTGGGCTTCCACAAGGGAAGCCGATaGCCCAGGCCAGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: LAGSLVWGRVGFGNSLGFHKGSR*PRPVPQ
Trigger: CTGTGGGACTGGCCTGGGCCATCGGCTTCCCTTGTG...GAAGCCCAGGCTGTTGCCAAACCCTACCCTGCCCCACACCAAGGAGCCAGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248451.7
CDS-3UTR CCA 90 bp GAGGAGGGGACCCTCCCAGTTGGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTACAGCCACAGCCAGCTaGGCCTGGGTGTCGATGATG +
Preference number: 4 (lower is better)
Translates to: EEGTLPVGRVWRCPETPPTATAS*AWVSMM
Trigger: CATCATCGACACCCAGGCCCAGCTGGCTGTGGCTGT...AGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGGGAGGGTCCCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GACCTGCAAGACTGTGGGGCTCCACACTCCAGACTCCAGTGTCTCCTTAGCCCAGGGTCGGGCCAGGTCTaGGACCCAGAGCTGCCATGC +
Preference number: 4 (lower is better)
Translates to: DLQDCGAPHSRLQCLLSPGSGQV*DPELPC
Trigger: GCATGGCAGCTCTGGGTCCCAGACCTGGCCCGACCC...TGGGCTAAGGAGACACTGGAGTCTGGAGTGTGGAGCCCCACAGTCTTGCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp CGTCAGAGCCCCCTCCTGCCAGCCGGATGGGGGCCTGGATCCAGTGGGAAATCACAGGGTTCCTCGCTGTaGCTCCAAAGGGATCTCGAC +
Preference number: 4 (lower is better)
Translates to: RQSPLLPAGWGPGSSGKSQGSSL*LQRDLD
Trigger: GTCGAGATCCCTTTGGAGCCACAGCGAGGAACCCTG...TGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp GAGGGGCTGAGCTTCTTTCCCAACCATGGATGGGGGAAGGGCAAGATGGACCCTCACAGCCCGAGGGTCTaGAGGGTCCACAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: EGLSFFPNHGWGKGKMDPHSPRV*RVHSHS
Trigger: GCTGTGGCTGTGGACCCTTCAGACCCTCGGGCTGTG...AGGGTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAGCTCAGCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GGCTGGCTCCTTGGTGTGGGGCAGGGTAGGGTTTGGCAACAGCCTGGGCTTCATCCGGGAATTGTAGTTTaGGTAAGGGGCCTCCCCCGC +
Preference number: 4 (lower is better)
Translates to: GWLLGVGQGRVWQQPGLHPGIVV*VRGLPR
Trigger: GCGGGGGAGGCCCCTTACGCAAACTACAATTCCCGG...ATGAAGCCCAGGCTGTTGCCAAACCCTACCCTGCCCCACACCAAGGAGCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000248451.7
CDS-3UTR GCA 90 bp CGTCAGAGCCCCCTCCTGCCAGCCGGATGGGGGCCTGGATCCAGTGGGAAATCAGCCCAGGTTCTCCTCTaGATACTCATGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RQSPLLPAGWGPGSSGKSAQVLL*ILMTRP
Trigger: TGGCCTGGTCATGAGTATGCAGAGGAGAACCTGGGC...TGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GAGGGGCTGAGCTTCTTTCCCAACCATGGATGGGGGAAGGGCAAGATGGACCCTTGCCGCTGCACCCACTaGATCTTCCTCTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: EGLSFFPNHGWGKGKMDPCRCTH*IFLSRA
Trigger: GGCCCGGGAGAGGAAGATGCAGTGGGTGCAGCGGCA...AGGGTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAGCTCAGCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GAGGGGGCCTTTGAGGGGATCGTGAGAGATGAACTTGCCAGGCAGACAAGGCAGTTGCGCTCCAGCCGCTaGCGCTGCACCCACTGCATC +
Preference number: 4 (lower is better)
Translates to: EGAFEGIVRDELARQTRQLRSSR*RCTHCI
Trigger: GATGCAGTGGGTGCAGCGGCAGCGGCTGGAGCGCAA...CTGCCTTGTCTGCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGGCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GAGGAGGGGACCCTCCCAGTTGGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTGGAGAGCATGTGACCTaGAAGACTGTGGGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: EEGTLPVGRVWRCPETPPGEHVT*KTVGLH
Trigger: GTGGAGCCCCACAGTCTTGCAGGTCACATGCTCTCC...AGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGGGAGGGTCCCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp TTTGGCCTCACAGTCTCATCGCCTGATCCCTCCCCTCCCCTGAGCAGTGTGGGGACAGCCACAGCCAGCTaGGCCTGGGTGTCGATGATG +
Preference number: 4 (lower is better)
Translates to: FGLTVSSPDPSPPLSSVGTATAS*AWVSMM
Trigger: CATCATCGACACCCAGGCCCAGCTGGCTGTGGCTGT...CCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GAGGGGGCCTTTGAGGGGATCGTGAGAGATGAACTTGCCAGGCAGACAAGGCAGCTGGGCTGGGGGCGCTaGGGGCATCACTTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: EGAFEGIVRDELARQTRQLGWGR*GHHLLL
Trigger: CAAGAGCAAGTGATGCCCCCAGCGCCCCCAGCCCAG...CTGCCTTGTCTGCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGGCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp TTTGGCCTCACAGTCTCATCGCCTGATCCCTCCCCTCCCCTGAGCAGTGTGGGGATGATGAGGTGTTGGTaGTGGCGGCCTCCCCATGCG +
Preference number: 4 (lower is better)
Translates to: FGLTVSSPDPSPPLSSVGMMRCW*WRPPHA
Trigger: CGCATGGGGAGGCCGCCACCACCAACACCTCATCAT...CCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp TTTGGCCTCACAGTCTCATCGCCTGATCCCTCCCCTCCCCTGAGCAGTGTGGGGGGCCAAAGAGGACCGTaGCTGTCTCTCCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: FGLTVSSPDPSPPLSSVGGQRGP*LSLPWQ
Trigger: TTGCCAGGGGAGAGACAGCCACGGTCCTCTTTGGCC...CCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GAGGAGGGGACCCTCCCAGTTGGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTAGCCGGATGGGGGCCTaGATCCAGTGGGAAATCACA +
Preference number: 4 (lower is better)
Translates to: EEGTLPVGRVWRCPETPPSRMGA*IQWEIT
Trigger: TGTGATTTCCCACTGGATCCAGGCCCCCATCCGGCT...AGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGGGAGGGTCCCCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGCTCCTGCCAGCCGGATaGGGGCCTGGATCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: TREALTKCRGSLEGRGTGLLPAG*GPGSSG
Trigger: CCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAG...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GGTCGGGCCAGGTCTGGGACCCAGAGCTGCCATGCACTCCCGCGCTCTCACAGAGGAAAAGAGGGCTCCTaGCTGACTCAAGGTACACCT +
Preference number: 4 (lower is better)
Translates to: GRARSGTQSCHALPRSHRGKEGS*LTQGTP
Trigger: AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCC...TCTGTGAGAGCGCGGGAGTGCATGGCAGCTCTGGGTCCCAGACCTGGCCCGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp TTTGGCCTCACAGTCTCATCGCCTGATCCCTCCCCTCCCCTGAGCAGTGTGGGGAGGGCAGGGGCATCTTaGAGGGTCACCAGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: FGLTVSSPDPSPPLSSVGRAGAS*RVTRGE
Trigger: CTCACCTCTGGTGACCCTCCAAGATGCCCCTGCCCT...CCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GAGGGGGCCTTTGAGGGGATCGTGAGAGATGAACTTGCCAGGCAGACAAGGCAGAGTGCAGAGGTAGCCTaGAGGGGAGGGGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: EGAFEGIVRDELARQTRQSAEVA*RGGAQG
Trigger: CCCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACT...CTGCCTTGTCTGCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGGCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp CGTCAGAGCCCCCTCCTGCCAGCCGGATGGGGGCCTGGATCCAGTGGGAAATCAGAATGGCGACCAAGGTaGCCCCTTCCTTTTCAATGG +
Preference number: 4 (lower is better)
Translates to: RQSPLLPAGWGPGSSGKSEWRPR*PLPFQW
Trigger: CCATTGAAAAGGAAGGGGTCACCTTGGTCGCCATTC...TGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp TTTGGCCTCACAGTCTCATCGCCTGATCCCTCCCCTCCCCTGAGCAGTGTGGGGAGGGCTACAGTGAGATaGGGCCTCCTGACGGAGAAG +
Preference number: 4 (lower is better)
Translates to: FGLTVSSPDPSPPLSSVGRATVR*GLLTEK
Trigger: CTTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCT...CCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp TTTGGCCTCACAGTCTCATCGCCTGATCCCTCCCCTCCCCTGAGCAGTGTGGGGTGCAAGGAGAGCATGTaGCCTGCAAGACTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: FGLTVSSPDPSPPLSSVGCKESM*PARLWG
Trigger: GCCCCACAGTCTTGCAGGTCACATGCTCTCCTTGCA...CCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp GAGGAGGGGACCCTCCCAGTTGGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTCCTTTGAGGGGATCGTaGGAGATGAACTTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: EEGTLPVGRVWRCPETPPPLRGS*EMNLPG
Trigger: GCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGG...AGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGGGAGGGTCCCCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp TGGCTCCTTGGTGTGGGGCAGGGTAGGGTTTGGCAACAGCCTGGGCTTCATGCGAGCGCTCCTCAGGTCTaGACCCCAGACCCAACATCA +
Preference number: 4 (lower is better)
Translates to: WLLGVGQGRVWQQPGLHASAPQV*TPDPTS
Trigger: TGATGTTGGGTCTGGGGTGCAGACCTGAGGAGCGCT...CGCATGAAGCCCAGGCTGTTGCCAAACCCTACCCTGCCCCACACCAAGGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248451.7
CDS-3UTR GCA 90 bp AGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTGAGGACCACAGGGTTCCTCGGGCTCCACCACACCTaGAAAGCCCAGGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: RGLLADSRYTCLRTTGFLGLHHT*KAQVLL
Trigger: GAGGAGAACCTGGGCTTTGCAGGTGTGGTGGAGCCC...GAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GAGGGGGCCTTTGAGGGGATCGTGAGAGATGAACTTGCCAGGCAGACAAGGCAGTCTGGGACCCAGAGCTaGCATGCACTCCCGCGCTCT +
Preference number: 4 (lower is better)
Translates to: EGAFEGIVRDELARQTRQSGTQS*HALPRS
Trigger: AGAGCGCGGGAGTGCATGGCAGCTCTGGGTCCCAGA...CTGCCTTGTCTGCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGGCCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp CGTCAGAGCCCCCTCCTGCCAGCCGGATGGGGGCCTGGATCCAGTGGGAAATCAGAAGCATTGACAAAGTaGAGAGGTAGCCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RQSPLLPAGWGPGSSGKSEALTK*RGSLEG
Trigger: CCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTC...TGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp TTGGCTGGCTCCTTGGTGTGGGGCAGGGTAGGGTTTGGCAACAGCCTGGGCTTCGGGCAGGGTAGGGTTTaGCAACAGCCTGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: LAGSLVWGRVGFGNSLGFGQGRV*QQPGLH
Trigger: ATGAAGCCCAGGCTGTTGCCAAACCCTACCCTGCCC...GAAGCCCAGGCTGTTGCCAAACCCTACCCTGCCCCACACCAAGGAGCCAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248451.7
CDS-3UTR CCA 90 bp GAGGGGGCCTTTGAGGGGATCGTGAGAGATGAACTTGCCAGGCAGACAAGGCAGCGGAAGAGCAGCCGCTaGCTGTGCGCCATGAGCAGA +
Preference number: 4 (lower is better)
Translates to: EGAFEGIVRDELARQTRQRKSSR*LCAMSR
Trigger: TCTGCTCATGGCGCACAGCCAGCGGCTGCTCTTCCG...CTGCCTTGTCTGCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGGCCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258362.7
CDS-3UTR CCA 90 bp TTTGGCCTCACAGTCTCATCGCCTGATCCCTCCCCTCCCCTGAGCAGTGTGGGGTGTAGCGCCAGGCAGTaGGTTCTCAGGAACGGGTTG +
Preference number: 4 (lower is better)
Translates to: FGLTVSSPDPSPPLSSVGCSARQ*VLRNGL
Trigger: CAACCCGTTCCTGAGAACCCACTGCCTGGCGCTACA...CCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp AAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATGAGGCCTCCTGACGGAGAAATGAGGTGTTGGTGGTaGCGGCCTCCCCATGCGGGG +
Preference number: 4 (lower is better)
Translates to: KMDPGFQGYSEMRPPDGEMRCWW*RPPHAG
Trigger: CCCCGCATGGGGAGGCCGCCACCACCAACACCTCAT...TTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp TTTGGCCTCACAGTCTCATCGCCTGATCCCTCCCCTCCCCTGAGCAGTGTGGGGCAGGCCCCCTTCTTTTaGCCTCACAGTCTCATCGCC +
Preference number: 4 (lower is better)
Translates to: FGLTVSSPDPSPPLSSVGQAPFF*PHSLIA
Trigger: GGCGATGAGACTGTGAGGCCAAAAGAAGGGGGCCTG...CCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GAGGGGCTGAGCTTCTTTCCCAACCATGGATGGGGGAAGGGCAAGATGGACCCTCAGGGGTTGCCTTCCTaGAGGAGGGGGCCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: EGLSFFPNHGWGKGKMDPQGLPS*RRGPLR
Trigger: CCTCAAAGGCCCCCTCCTCCAGGAAGGCAACCCCTG...AGGGTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAGCTCAGCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp AGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTGAGGACCACAGGGTTCCTCCACTTGAGGCCACTGTaGGGGGCTGAGCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: RGLLADSRYTCLRTTGFLHLRPL*GAELLS
Trigger: GGAAAGAAGCTCAGCCCCTCACAGTGGCCTCAAGTG...GAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp GAGGGGGCCTTTGAGGGGATCGTGAGAGATGAACTTGCCAGGCAGACAAGGCAGGCAGAGGCCAGATCATaGGGGGAAACTGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: EGAFEGIVRDELARQTRQAEARS*GETEGR
Trigger: CCTGCCCTCAGTTTCCCCTCATGATCTGGCCTCTGC...CTGCCTTGTCTGCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGGCCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GGCTGGCTCCTTGGTGTGGGGCAGGGTAGGGTTTGGCAACAGCCTGGGCTTCATCCGCTCCTTCCGTCCTaGCTACAGACCAGAAACTAC +
Preference number: 4 (lower is better)
Translates to: GWLLGVGQGRVWQQPGLHPLLPS*LQTRNY
Trigger: GTAGTTTCTGGTCTGTAGGCAGGACGGAAGGAGCGG...ATGAAGCCCAGGCTGTTGCCAAACCCTACCCTGCCCCACACCAAGGAGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000248451.7
CDS-3UTR GCA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTTGCCGCTGCACCCACTaGATCTTCCTCTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPCRCTH*IFLSRA
Trigger: GGCCCGGGAGAGGAAGATGCAGTGGGTGCAGCGGCA...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTTTGCGCTCCAGCCGCTaGCGCTGCACCCACTGCATC +
Preference number: 4 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPLRSSR*RCTHCI
Trigger: GATGCAGTGGGTGCAGCGGCAGCGGCTGGAGCGCAA...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp AAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATGAGGCCTCCTGACGGAGAACAGCCCCCATGTCCTTaGTGCCGTCCCAGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: KMDPGFQGYSEMRPPDGEQPPCP*CRPRSR
Trigger: CCTACTCCTGGGACGGCAGCAAGGACATGGGGGCTG...TTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGCAGCCCCCATGTCCTTaGTGCCGTCCCAGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: TREALTKCRGSLEGRGTGQPPCP*CRPRSR
Trigger: CCTACTCCTGGGACGGCAGCAAGGACATGGGGGCTG...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GGTCGGGCCAGGTCTGGGACCCAGAGCTGCCATGCACTCCCGCGCTCTCACAGATGCCCATCTGAGTGGTaGTTTTGTAAGGCATCACAC +
Preference number: 4 (lower is better)
Translates to: GRARSGTQSCHALPRSHRCPSEW*FCKASH
Trigger: GTGTGATGCCTTACAAAAGCACCACTCAGATGGGCA...TCTGTGAGAGCGCGGGAGTGCATGGCAGCTCTGGGTCCCAGACCTGGCCCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp TTTGGCCTCACAGTCTCATCGCCTGATCCCTCCCCTCCCCTGAGCAGTGTGGGGGACTCAAGGTACACCTaGCTGAGGACCACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: FGLTVSSPDPSPPLSSVGDSRYT*LRTTGF
Trigger: GAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTC...CCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GAGGAGGGGACCCTCCCAGTTGGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTTTGAAGAGGCGGGGCTaGGTTTTCGAGTGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: EEGTLPVGRVWRCPETPPLKRRG*VFEWPL
Trigger: TAAAGGCCACTCGAAAACCCAGCCCCGCCTCTTCAA...AGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGGGAGGGTCCCCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCCTCTCCCAGGGTAGATaGGCACGTGCCCTTGCGCTC +
Preference number: 4 (lower is better)
Translates to: SATREALTKCRGSLEGRGLSQGR*ARALAL
Trigger: GAGCGCAAGGGCACGTGCCCATCTACCCTGGGAGAG...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp AAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATGAGGCCTCCTGACGGAGAAGGGATGATGCCCGCTTaGGTGCCGATGGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: KMDPGFQGYSEMRPPDGEGMMPA*VPMEVV
Trigger: CACCACCTCCATCGGCACCCAAGCGGGCATCATCCC...TTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GAGGGGCTGAGCTTCTTTCCCAACCATGGATGGGGGAAGGGCAAGATGGACCCTGGCCAAAGAGGACCGTaGCTGTCTCTCCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: EGLSFFPNHGWGKGKMDPGQRGP*LSLPWQ
Trigger: TTGCCAGGGGAGAGACAGCCACGGTCCTCTTTGGCC...AGGGTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAGCTCAGCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGCAGGGGTTGCCTTCCTaGAGGAGGGGGCCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: TREALTKCRGSLEGRGTGQGLPS*RRGPLR
Trigger: CCTCAAAGGCCCCCTCCTCCAGGAAGGCAACCCCTG...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp AGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTGAGGACCACAGGGTTCCTCTGGTCCCAGTGCTTGTaGGTACACAGAATGGCGACC +
Preference number: 4 (lower is better)
Translates to: RGLLADSRYTCLRTTGFLWSQCL*VHRMAT
Trigger: GGTCGCCATTCTGTGTACTCACAAGCACTGGGACCA...GAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp GGAAATCACATGGGAATATGGCTGGCAAACTGCAAAGGGCCAGATGAGTGTCAGGCCAGGGCCCGGATCTaGAGCCGTCCCACGCTGACC +
Preference number: 4 (lower is better)
Translates to: GNHMGIWLANCKGPDECQARARI*SRPTLT
Trigger: GGTCAGCGTGGGACGGCTTCAGATCCGGGCCCTGGC...CTGACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTGAAGAGCAGGTCCCCTaGGAAGAGGCAGGAGGGACC +
Preference number: 4 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPEEQVP*EEAGGT
Trigger: GGTCCCTCCTGCCTCTTCTCAGGGGACCTGCTCTTC...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp GAGGGGCTGAGCTTCTTTCCCAACCATGGATGGGGGAAGGGCAAGATGGACCCTGTAAGGCATCACACTTaGGGCCACTGTGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: EGLSFFPNHGWGKGKMDPVRHHT*GHCEGL
Trigger: CAGCCCCTCACAGTGGCCTCAAGTGTGATGCCTTAC...AGGGTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAGCTCAGCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGAGCGATTCCGAGCCCTaGGCAGCTGCTGTCGGTAGA +
Preference number: 4 (lower is better)
Translates to: TREALTKCRGSLEGRGTGSDSEP*AAAVGR
Trigger: TCTACCGACAGCAGCTGCGCAGGGCTCGGAATCGCT...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCAGCGATTCCGAGCCCTaGGCAGCTGCTGTCGGTAGA +
Preference number: 4 (lower is better)
Translates to: SATREALTKCRGSLEGRGSDSEP*AAAVGR
Trigger: TCTACCGACAGCAGCTGCGCAGGGCTCGGAATCGCT...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp AGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTGAGGACCACAGGGTTCCTCGCTCAGCATGGTCTCTaGATTGCCCTCAAAGGTCCG +
Preference number: 4 (lower is better)
Translates to: RGLLADSRYTCLRTTGFLAQHGL*IALKGP
Trigger: CGGACCTTTGAGGGCAATGCAGAGACCATGCTGAGC...GAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GAGGAGGGGACCCTCCCAGTTGGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTGCTGGGGGCATCACTTaGTCTTGTGCATATCCTTCA +
Preference number: 4 (lower is better)
Translates to: EEGTLPVGRVWRCPETPPAGGIT*SCAYPS
Trigger: TGAAGGATATGCACAAGAGCAAGTGATGCCCCCAGC...AGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGGGAGGGTCCCCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GGAAATCACATGGGAATATGGCTGGCAAACTGCAAAGGGCCAGATGAGTGTCAGGTCAGAGCCCCCTCCTaGCAGCCGGATGGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GNHMGIWLANCKGPDECQVRAPS*QPDGGL
Trigger: CAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGAC...CTGACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp AAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATGAGGCCTCCTGACGGAGAAAGATGGCCTTGTGTGTaGCCAGGTGTAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: KMDPGFQGYSEMRPPDGERWPCV*PGVARA
Trigger: GGCCCTGGCTACACCTGGCCACACACAAGGCCATCT...TTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GACCTGCAAGACTGTGGGGCTCCACACTCCAGACTCCAGTGTCTCCTTAGCCCATGTAGCGCCAGGCAGTaGGTTCTCAGGAACGGGTTG +
Preference number: 4 (lower is better)
Translates to: DLQDCGAPHSRLQCLLSPCSARQ*VLRNGL
Trigger: CAACCCGTTCCTGAGAACCCACTGCCTGGCGCTACA...TGGGCTAAGGAGACACTGGAGTCTGGAGTGTGGAGCCCCACAGTCTTGCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGATGATGAGGTGTTGGTaGTGGCGGCCTCCCCATGCG +
Preference number: 4 (lower is better)
Translates to: TREALTKCRGSLEGRGTGMMRCW*WRPPHA
Trigger: CGCATGGGGAGGCCGCCACCACCAACACCTCATCAT...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GACCTGCAAGACTGTGGGGCTCCACACTCCAGACTCCAGTGTCTCCTTAGCCCAAGGATGATGAGGTGTTaGTGGTGGCGGCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: DLQDCGAPHSRLQCLLSPRMMRC*WWRPPH
Trigger: ATGGGGAGGCCGCCACCACCAACACCTCATCATCCT...TGGGCTAAGGAGACACTGGAGTCTGGAGTGTGGAGCCCCACAGTCTTGCAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp TTTGGCCTCACAGTCTCATCGCCTGATCCCTCCCCTCCCCTGAGCAGTGTGGGGTTTCCCAACCATGGATaGGGGAAGGGCAAGATGGAC +
Preference number: 4 (lower is better)
Translates to: FGLTVSSPDPSPPLSSVGFPNHG*GKGKMD
Trigger: GTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAA...CCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GAGGGGCTGAGCTTCTTTCCCAACCATGGATGGGGGAAGGGCAAGATGGACCCTCAGGGTTCCTCGCTGTaGCTCCAAAGGGATCTCGAC +
Preference number: 4 (lower is better)
Translates to: EGLSFFPNHGWGKGKMDPQGSSL*LQRDLD
Trigger: GTCGAGATCCCTTTGGAGCCACAGCGAGGAACCCTG...AGGGTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAGCTCAGCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGAGGGCAGGGGCATCTTaGAGGGTCACCAGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: TREALTKCRGSLEGRGTGRAGAS*RVTRGE
Trigger: CTCACCTCTGGTGACCCTCCAAGATGCCCCTGCCCT...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGCACTTGAGGCCACTGTaGGGGGCTGAGCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TREALTKCRGSLEGRGTGHLRPL*GAELLS
Trigger: GGAAAGAAGCTCAGCCCCTCACAGTGGCCTCAAGTG...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCTGCAAGGAGAGCATGTaGCCTGCAAGACTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SATREALTKCRGSLEGRGCKESM*PARLWG
Trigger: GCCCCACAGTCTTGCAGGTCACATGCTCTCCTTGCA...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCAAGAGGGCTCCTGGCTaGCTCAAGGTACACCTGCCT +
Preference number: 4 (lower is better)
Translates to: SATREALTKCRGSLEGRGKRAPG*LKVHLP
Trigger: AGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCTT...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTCCCGAGGGCAGGCTTTaGCACAGGAAAAGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPPEGRL*HRKRGL
Trigger: GAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCTCGGG...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp TTTGGCCTCACAGTCTCATCGCCTGATCCCTCCCCTCCCCTGAGCAGTGTGGGGGAAGGCACAGAGGCATaGAACTGCATGTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: FGLTVSSPDPSPPLSSVGEGTEA*NCMSCL
Trigger: CAAGCAAGACATGCAGTTTCATGCCTCTGTGCCTTC...CCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp TTTGGCCTCACAGTCTCATCGCCTGATCCCTCCCCTCCCCTGAGCAGTGTGGGGCCACAAGAGAAGCATTaGCAAAGTGCAGAGGTAGCC +
Preference number: 4 (lower is better)
Translates to: FGLTVSSPDPSPPLSSVGPQEKH*QSAEVA
Trigger: GGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGG...CCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp AAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATGAGGCCTCCTGACGGAGAAGCATGGTCTCTGCATTaGCCTCAAAGGTCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: KMDPGFQGYSEMRPPDGEAWSLH*PQRSAH
Trigger: GTGGGCGGACCTTTGAGGGCAATGCAGAGACCATGC...TTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTGGGCTCCACCACACCTaGAAAGCCCAGGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPGLHHT*KAQVLL
Trigger: GAGGAGAACCTGGGCTTTGCAGGTGTGGTGGAGCCC...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GACCTGCAAGACTGTGGGGCTCCACACTCCAGACTCCAGTGTCTCCTTAGCCCAGACTCAAGGTACACCTaGCTGAGGACCACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: DLQDCGAPHSRLQCLLSPDSRYT*LRTTGF
Trigger: GAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTC...TGGGCTAAGGAGACACTGGAGTCTGGAGTGTGGAGCCCCACAGTCTTGCAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp AAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATGAGGCCTCCTGACGGAGAACAGGCCCCCTTCTTTTaGCCTCACAGTCTCATCGCC +
Preference number: 4 (lower is better)
Translates to: KMDPGFQGYSEMRPPDGEQAPFF*PHSLIA
Trigger: GGCGATGAGACTGTGAGGCCAAAAGAAGGGGGCCTG...TTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp AAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATGAGGCCTCCTGACGGAGAACCAGTTGGTAGGGTCTaGAGATGTCCCGAGACCCCT +
Preference number: 4 (lower is better)
Translates to: KMDPGFQGYSEMRPPDGEPVGRV*RCPETP
Trigger: AGGGGTCTCGGGACATCTCCAGACCCTACCAACTGG...TTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp TTTGGCCTCACAGTCTCATCGCCTGATCCCTCCCCTCCCCTGAGCAGTGTGGGGATGAGGAGGTTTCCTTaGCAATCAGGACCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: FGLTVSSPDPSPPLSSVGMRRFP*QSGPSF
Trigger: GAAGGAGGGTCCTGATTGCCAAGGAAACCTCCTCAT...CCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GAGGAGGGGACCCTCCCAGTTGGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTGTCTTGCTTGGTGAGTaGGGAACTCTAACTAGTCTG +
Preference number: 4 (lower is better)
Translates to: EEGTLPVGRVWRCPETPPVLLGE*GTLTSL
Trigger: CAGACTAGTTAGAGTTCCCCACTCACCAAGCAAGAC...AGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGGGAGGGTCCCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCGAAGCCGTCCCACGCTaGCCACATCTTGATGACACA +
Preference number: 4 (lower is better)
Translates to: SATREALTKCRGSLEGRGEAVPR*PHLDDT
Trigger: TGTGTCATCAAGATGTGGTCAGCGTGGGACGGCTTC...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGGAAGCCGTCCCACGCTaGCCACATCTTGATGACACA +
Preference number: 4 (lower is better)
Translates to: TREALTKCRGSLEGRGTGEAVPR*PHLDDT
Trigger: TGTGTCATCAAGATGTGGTCAGCGTGGGACGGCTTC...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTGTAAGGCATCACACTTaGGGCCACTGTGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPVRHHT*GHCEGL
Trigger: CAGCCCCTCACAGTGGCCTCAAGTGTGATGCCTTAC...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp AGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTGAGGACCACAGGGTTCCTCGAAGGCACAGAGGCATaGAACTGCATGTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: RGLLADSRYTCLRTTGFLEGTEA*NCMSCL
Trigger: CAAGCAAGACATGCAGTTTCATGCCTCTGTGCCTTC...GAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGCCTTTGAGGGGATCGTaGGAGATGAACTTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TREALTKCRGSLEGRGTGPLRGS*EMNLPG
Trigger: GCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGG...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCGCCCAGGTTCTCCTCTaGATACTCATGACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SATREALTKCRGSLEGRGAQVLL*ILMTRP
Trigger: TGGCCTGGTCATGAGTATGCAGAGGAGAACCTGGGC...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GAGGGGCTGAGCTTCTTTCCCAACCATGGATGGGGGAAGGGCAAGATGGACCCTCATCACTTGCTCTTGTaGATATCCTTCAGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: EGLSFFPNHGWGKGKMDPHHLLL*ISFSRR
Trigger: CCGCCGGCTGAAGGATATGCACAAGAGCAAGTGATG...AGGGTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAGCTCAGCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp TTTGGCCTCACAGTCTCATCGCCTGATCCCTCCCCTCCCCTGAGCAGTGTGGGGTGCCCATCTGAGTGGTaGTTTTGTAAGGCATCACAC +
Preference number: 4 (lower is better)
Translates to: FGLTVSSPDPSPPLSSVGCPSEW*FCKASH
Trigger: GTGTGATGCCTTACAAAAGCACCACTCAGATGGGCA...CCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GAGGGGCTGAGCTTCTTTCCCAACCATGGATGGGGGAAGGGCAAGATGGACCCTACACCAGAGTCCAGCTaGCCATCTGAGTGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: EGLSFFPNHGWGKGKMDPTPESS*PSEWCF
Trigger: AAAGCACCACTCAGATGGGCAGCTGGACTCTGGTGT...AGGGTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAGCTCAGCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GAGGGGGCCTTTGAGGGGATCGTGAGAGATGAACTTGCCAGGCAGACAAGGCAGGAAGCATTGACAAAGTaGAGAGGTAGCCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: EGAFEGIVRDELARQTRQEALTK*RGSLEG
Trigger: CCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTC...CTGCCTTGTCTGCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGGCCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GACCTGCAAGACTGTGGGGCTCCACACTCCAGACTCCAGTGTCTCCTTAGCCCACCAGTGAGCTCAGCATaGTCTCTGCATTGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: DLQDCGAPHSRLQCLLSPPVSSA*SLHCPQ
Trigger: TTGAGGGCAATGCAGAGACCATGCTGAGCTCACTGG...TGGGCTAAGGAGACACTGGAGTCTGGAGTGTGGAGCCCCACAGTCTTGCAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GAGGGGCTGAGCTTCTTTCCCAACCATGGATGGGGGAAGGGCAAGATGGACCCTTTTCCCAACCATGGATaGGGGAAGGGCAAGATGGAC +
Preference number: 4 (lower is better)
Translates to: EGLSFFPNHGWGKGKMDPFPNHG*GKGKMD
Trigger: GTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAA...AGGGTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAGCTCAGCCCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp AGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTGAGGACCACAGGGTTCCTCGCTCTGTCTGAAAAATaGCTTTGCAGGGATGGGTGG +
Preference number: 4 (lower is better)
Translates to: RGLLADSRYTCLRTTGFLALSEK*LCRDGW
Trigger: CCACCCATCCCTGCAAAGCCATTTTTCAGACAGAGC...GAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGACAGGAAAGGTTAGATaGAGGAAGGCGGGCAGACGG +
Preference number: 4 (lower is better)
Translates to: TREALTKCRGSLEGRGTGTGKVR*RKAGRR
Trigger: CCGTCTGCCCGCCTTCCTCCATCTAACCTTTCCTGT...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GAGGAGGGGACCCTCCCAGTTGGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTCAGTGGGAAATCACATaGGAATATGGCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: EEGTLPVGRVWRCPETPPQWEIT*EYGWQT
Trigger: AGTTTGCCAGCCATATTCCCATGTGATTTCCCACTG...AGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGGGAGGGTCCCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTAGCCGGATGGGGGCCTaGATCCAGTGGGAAATCACA +
Preference number: 4 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPSRMGA*IQWEIT
Trigger: TGTGATTTCCCACTGGATCCAGGCCCCCATCCGGCT...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp GGAAATCACATGGGAATATGGCTGGCAAACTGCAAAGGGCCAGATGAGTGTCAGGAAGAGCAGGTCCCCTaGGAAGAGGCAGGAGGGACC +
Preference number: 4 (lower is better)
Translates to: GNHMGIWLANCKGPDECQEEQVP*EEAGGT
Trigger: GGTCCCTCCTGCCTCTTCTCAGGGGACCTGCTCTTC...CTGACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp AGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTGAGGACCACAGGGTTCCTCAGGAATGGCTCTGTCTaGAAAATGGCTTTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RGLLADSRYTCLRTTGFLRNGSV*KMALQG
Trigger: TCCCTGCAAAGCCATTTTTCAGACAGAGCCATTCCT...GAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp AGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTGAGGACCACAGGGTTCCTCGAACAAGGGCCAAAATaGGAATACAGCATCGGCCAA +
Preference number: 4 (lower is better)
Translates to: RGLLADSRYTCLRTTGFLEQGPK*EYSIGQ
Trigger: TTGGCCGATGCTGTATTCTCATTTTGGCCCTTGTTC...GAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp AGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTGAGGACCACAGGGTTCCTCCTGCAAAGGGCCAGATaGGTGTCAGGTTACAGAATA +
Preference number: 4 (lower is better)
Translates to: RGLLADSRYTCLRTTGFLLQRAR*VSGYRI
Trigger: TATTCTGTAACCTGACACTCATCTGGCCCTTTGCAG...GAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GAGGGGCTGAGCTTCTTTCCCAACCATGGATGGGGGAAGGGCAAGATGGACCCTTTTTCAATGGAAGCCTaGACAGCCCGAGGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: EGLSFFPNHGWGKGKMDPFSMEA*TARGSE
Trigger: TTCAGACCCTCGGGCTGTGCAGGCTTCCATTGAAAA...AGGGTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAGCTCAGCCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTGCTCAGCATGGTCTCTaGATTGCCCTCAAAGGTCCG +
Preference number: 4 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPAQHGL*IALKGP
Trigger: CGGACCTTTGAGGGCAATGCAGAGACCATGCTGAGC...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GGAAATCACATGGGAATATGGCTGGCAAACTGCAAAGGGCCAGATGAGTGTCAGTCCAGCCGCTGCCGCTaGACCCACTGCATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GNHMGIWLANCKGPDECQSSRCR*THCIFL
Trigger: GAGGAAGATGCAGTGGGTGCAGCGGCAGCGGCTGGA...CTGACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp AAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATGAGGCCTCCTGACGGAGAAACACCAGAGTCCAGCTaGCCATCTGAGTGGTGCTTT +
Preference number: 4 (lower is better)
Translates to: KMDPGFQGYSEMRPPDGETPESS*PSEWCF
Trigger: AAAGCACCACTCAGATGGGCAGCTGGACTCTGGTGT...TTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GGAAATCACATGGGAATATGGCTGGCAAACTGCAAAGGGCCAGATGAGTGTCAGGACCCAGAGCTGCCATaGACTCCCGCGCTCTCACAG +
Preference number: 4 (lower is better)
Translates to: GNHMGIWLANCKGPDECQDPELP*TPALSQ
Trigger: CTGTGAGAGCGCGGGAGTGCATGGCAGCTCTGGGTC...CTGACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GGAAATCACATGGGAATATGGCTGGCAAACTGCAAAGGGCCAGATGAGTGTCAGTCTGGGACCCAGAGCTaGCATGCACTCCCGCGCTCT +
Preference number: 4 (lower is better)
Translates to: GNHMGIWLANCKGPDECQSGTQS*HALPRS
Trigger: AGAGCGCGGGAGTGCATGGCAGCTCTGGGTCCCAGA...CTGACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTACAGGAAAGGTTAGATaGAGGAAGGCGGGCAGACGG +
Preference number: 4 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPTGKVR*RKAGRR
Trigger: CCGTCTGCCCGCCTTCCTCCATCTAACCTTTCCTGT...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGGTCTCCTTAGCCCAATaGGGAGGTTTCCTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: TREALTKCRGSLEGRGTGVSLAQ*GGFLGN
Trigger: ATTGCCAAGGAAACCTCCTCATTGGGCTAAGGAGAC...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp AAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATGAGGCCTCCTGACGGAGAAGTCTCCTTAGCCCAATaGGGAGGTTTCCTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: KMDPGFQGYSEMRPPDGEVSLAQ*GGFLGN
Trigger: ATTGCCAAGGAAACCTCCTCATTGGGCTAAGGAGAC...TTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp GAGGGGGCCTTTGAGGGGATCGTGAGAGATGAACTTGCCAGGCAGACAAGGCAGCTGCAAAGGGCCAGATaGGTGTCAGGTTACAGAATA +
Preference number: 4 (lower is better)
Translates to: EGAFEGIVRDELARQTRQLQRAR*VSGYRI
Trigger: TATTCTGTAACCTGACACTCATCTGGCCCTTTGCAG...CTGCCTTGTCTGCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGGCCCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp GGAAATCACATGGGAATATGGCTGGCAAACTGCAAAGGGCCAGATGAGTGTCAGCAAGGTACACCTGCCTaGGGACCACAGGGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: GNHMGIWLANCKGPDECQQGTPA*GPQGSS
Trigger: CGAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTG...CTGACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp AAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATGAGGCCTCCTGACGGAGAACCACAAGAGAAGCATTaGCAAAGTGCAGAGGTAGCC +
Preference number: 4 (lower is better)
Translates to: KMDPGFQGYSEMRPPDGEPQEKH*QSAEVA
Trigger: GGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGG...TTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp AAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATGAGGCCTCCTGACGGAGAATTTTCAATGGAAGCCTaGACAGCCCGAGGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: KMDPGFQGYSEMRPPDGEFSMEA*TARGSE
Trigger: TTCAGACCCTCGGGCTGTGCAGGCTTCCATTGAAAA...TTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTCATCACTTGCTCTTGTaGATATCCTTCAGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPHHLLL*ISFSRR
Trigger: CCGCCGGCTGAAGGATATGCACAAGAGCAAGTGATG...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GGAAATCACATGGGAATATGGCTGGCAAACTGCAAAGGGCCAGATGAGTGTCAGCCCCCATGTCCTTGCTaGCGTCCCAGGAGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: GNHMGIWLANCKGPDECQPPCPC*RPRSRE
Trigger: TTCCCTACTCCTGGGACGGCAGCAAGGACATGGGGG...CTGACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GACCTGCAAGACTGTGGGGCTCCACACTCCAGACTCCAGTGTCTCCTTAGCCCAATATGGCTGGCAAACTaGAAAGGGCCAGATGAGTGT +
Preference number: 4 (lower is better)
Translates to: DLQDCGAPHSRLQCLLSPIWLAN*KGPDEC
Trigger: ACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATAT...TGGGCTAAGGAGACACTGGAGTCTGGAGTGTGGAGCCCCACAGTCTTGCAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GAGGAGGGGACCCTCCCAGTTGGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTATACAGTGTGATAAGTaGCACAAGAGAAGCATTGAC +
Preference number: 4 (lower is better)
Translates to: EEGTLPVGRVWRCPETPPIQCDK*HKRSID
Trigger: GTCAATGCTTCTCTTGTGGCACTTATCACACTGTAT...AGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGGGAGGGTCCCCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GGAAATCACATGGGAATATGGCTGGCAAACTGCAAAGGGCCAGATGAGTGTCAGAGATGGCCTTGTGTGTaGCCAGGTGTAGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GNHMGIWLANCKGPDECQRWPCV*PGVARA
Trigger: GGCCCTGGCTACACCTGGCCACACACAAGGCCATCT...CTGACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTCCAGTGAGCTCAGCATaGTCTCTGCATTGCCCTCAA +
Preference number: 4 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPPVSSA*SLHCPQ
Trigger: TTGAGGGCAATGCAGAGACCATGCTGAGCTCACTGG...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCCTTCTTTCCCAACCATaGATGGGGGAAGGGCAAGAT +
Preference number: 4 (lower is better)
Translates to: SATREALTKCRGSLEGRGLLSQP*MGEGQD
Trigger: ATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAG...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGGCTCTGTCTGAAAAATaGCTTTGCAGGGATGGGTGG +
Preference number: 4 (lower is better)
Translates to: TREALTKCRGSLEGRGTGALSEK*LCRDGW
Trigger: CCACCCATCCCTGCAAAGCCATTTTTCAGACAGAGC...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp AGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTGAGGACCACAGGGTTCCTCCAGTGGGAAATCACATaGGAATATGGCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: RGLLADSRYTCLRTTGFLQWEIT*EYGWQT
Trigger: AGTTTGCCAGCCATATTCCCATGTGATTTCCCACTG...GAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGGGGGCCTGGATCCAGTaGGAAATCACATGGGAATAT +
Preference number: 4 (lower is better)
Translates to: TREALTKCRGSLEGRGTGGAWIQ*EITWEY
Trigger: ATATTCCCATGTGATTTCCCACTGGATCCAGGCCCC...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GACCTGCAAGACTGTGGGGCTCCACACTCCAGACTCCAGTGTCTCCTTAGCCCAGTCTTGCTTGGTGAGTaGGGAACTCTAACTAGTCTG +
Preference number: 4 (lower is better)
Translates to: DLQDCGAPHSRLQCLLSPVLLGE*GTLTSL
Trigger: CAGACTAGTTAGAGTTCCCCACTCACCAAGCAAGAC...TGGGCTAAGGAGACACTGGAGTCTGGAGTGTGGAGCCCCACAGTCTTGCAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp GGAAATCACATGGGAATATGGCTGGCAAACTGCAAAGGGCCAGATGAGTGTCAGGCCACTGTGAGGGGCTaGGCTTCTTTCCCAACCATG +
Preference number: 4 (lower is better)
Translates to: GNHMGIWLANCKGPDECQATVRG*ASFPTM
Trigger: CATGGTTGGGAAAGAAGCTCAGCCCCTCACAGTGGC...CTGACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR TCA 90 bp AAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATGAGGCCTCCTGACGGAGAAAGGAATGGCTCTGTCTaGAAAATGGCTTTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: KMDPGFQGYSEMRPPDGERNGSV*KMALQG
Trigger: TCCCTGCAAAGCCATTTTTCAGACAGAGCCATTCCT...TTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GGAAATCACATGGGAATATGGCTGGCAAACTGCAAAGGGCCAGATGAGTGTCAGCCAGTTGGTAGGGTCTaGAGATGTCCCGAGACCCCT +
Preference number: 4 (lower is better)
Translates to: GNHMGIWLANCKGPDECQPVGRV*RCPETP
Trigger: AGGGGTCTCGGGACATCTCCAGACCCTACCAACTGG...CTGACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTATATGGCTGGCAAACTaGAAAGGGCCAGATGAGTGT +
Preference number: 4 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPIWLAN*KGPDEC
Trigger: ACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATAT...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTAGCTGCCCATCTGAGTaGTGCTTTTGTAAGGCATCA +
Preference number: 4 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPSCPSE*CFCKAS
Trigger: TGATGCCTTACAAAAGCACCACTCAGATGGGCAGCT...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GGAAATCACATGGGAATATGGCTGGCAAACTGCAAAGGGCCAGATGAGTGTCAGGGAAAAGAGGGCTCCTaGCTGACTCAAGGTACACCT +
Preference number: 4 (lower is better)
Translates to: GNHMGIWLANCKGPDECQGKEGS*LTQGTP
Trigger: AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCC...CTGACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp GGAAATCACATGGGAATATGGCTGGCAAACTGCAAAGGGCCAGATGAGTGTCAGGCTGGGGGCATCACTTaGTCTTGTGCATATCCTTCA +
Preference number: 4 (lower is better)
Translates to: GNHMGIWLANCKGPDECQAGGIT*SCAYPS
Trigger: TGAAGGATATGCACAAGAGCAAGTGATGCCCCCAGC...CTGACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR GCA 90 bp AAGATGGACCCTGGGTTCCAGGGCTACAGTGAGATGAGGCCTCCTGACGGAGAAATACAGTGTGATAAGTaGCACAAGAGAAGCATTGAC +
Preference number: 4 (lower is better)
Translates to: KMDPGFQGYSEMRPPDGEIQCDK*HKRSID
Trigger: GTCAATGCTTCTCTTGTGGCACTTATCACACTGTAT...TTCTCCGTCAGGAGGCCTCATCTCACTGTAGCCCTGGAACCCAGGGTCCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CCA 90 bp GGAAATCACATGGGAATATGGCTGGCAAACTGCAAAGGGCCAGATGAGTGTCAGATGAGGAGGTTTCCTTaGCAATCAGGACCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GNHMGIWLANCKGPDECQMRRFP*QSGPSF
Trigger: GAAGGAGGGTCCTGATTGCCAAGGAAACCTCCTCAT...CTGACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS GCA 90 bp AGCCGGCGACCCACTGCCACGCCGCGGGCCAGCCCTGCCAAGCCATaGTGGGGGCAGGCACGCGCCGGCCGGGCGGGGCTCGGCGTTGCT +
Preference number: 5 (lower is better)
Translates to: SRRPTATPRASPAKP*WGQARAGRAGLGVA
Trigger: AGCAACGCCGAGCCCCGCCCGGCCGGCGCGTGCCTGCCCCCAGCATGGCTTGGCAGGGCTGGCCCGCGGCGTGGCAGTGGGTCGCCGGCT
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258362.7
CDS CCA 90 bp CGGCGACCCACTGCCACGCCGCGGGCCAGCCCTGCCAAGCCATGCTaGGGGCAGGCACGCGCCGGCCGGGCGGGGCTCGGCGTTGCTAGG +
Preference number: 5 (lower is better)
Translates to: RRPTATPRASPAKPC*GQARAGRAGLGVAR
Trigger: CCTAGCAACGCCGAGCCCCGCCCGGCCGGCGCGTGCCTGCCCCCAGCATGGCTTGGCAGGGCTGGCCCGCGGCGTGGCAGTGGGTCGCCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258362.7
CDS GCA 90 bp CGGGTGTACAGGCTGTACCCGATTCGGAAGAGCAGCCGCTGGCTGTaGGCCATGAGCAGACCGCGGAGGCCCCGCCGCGCTCGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: RVYRLYPIRKSSRWL*AMSRPRRPRRARQP
Trigger: CGGCTGCCGAGCGCGGCGGGGCCTCCGCGGTCTGCTCATGGCGCACAGCCAGCGGCTGCTCTTCCGAATCGGGTACAGCCTGTACACCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258362.7
CDS TCA 90 bp CGTCCTGAGGGCTCCCGTACACCCGACAGTCCCGGTGCCGCCGGCTaGGGTCACGGTTCCCTCCACTGTGGTCCCAGTGCTTGTGAGTAC +
Preference number: 5 (lower is better)
Translates to: RPEGSRTPDSPGAAG*GHGSLHCGPSACEY
Trigger: GTACTCACAAGCACTGGGACCACAGTGGAGGGAACCGTGACCTCAGCCGGCGGCACCGGGACTGTCGGGTGTACGGGAGCCCTCAGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258362.7
ENST00000273077.9
ENST00000436005.2
CDS CCA 90 bp GACTTCTTGATCTCTGGCCCCGGCCGTCCTCAATGGGCCCAGTCCTaGCAAGCCCAGCTGGGACAAGGGTGGGCCAGGGAAGACGGGAGC +
Preference number: 5 (lower is better)
Translates to: DFLISGPGRPQWAQS*QAQLGQGWAREDGS
Trigger: GCTCCCGTCTTCCCTGGCCCACCCTTGTCCCAGCTGGGCTTGCCAGGACTGGGCCCATTGAGGACGGCCGGGGCCAGAGATCAAGAAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483797.1
CDS-3UTR CAA 90 bp CTTGGTGTGGGGCAGGGTAGGGTTTGGCAACAGCCTGGGCTTCATGCGCCCTCTCCTTTGGCTGGCTCCTaGGTGTGGGGCAGGGTAGGG +
Preference number: 5 (lower is better)
Translates to: LGVGQGRVWQQPGLHAPSPLAGS*VWGRVG
Trigger: CCCTACCCTGCCCCACACCAAGGAGCCAGCCAAAGG...AGAGGGCGCATGAAGCCCAGGCTGTTGCCAAACCCTACCCTGCCCCACACCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000248451.7
CDS-3UTR CAA 90 bp GGTCGGGCCAGGTCTGGGACCCAGAGCTGCCATGCACTCCCGCGCTCTCACAGAGTAGACCAGATGGCCTaGTGTGTGGCCAGGTGTAGC +
Preference number: 5 (lower is better)
Translates to: GRARSGTQSCHALPRSHRVDQMA*CVARCS
Trigger: GCTACACCTGGCCACACACAAGGCCATCTGGTCTAC...TCTGTGAGAGCGCGGGAGTGCATGGCAGCTCTGGGTCCCAGACCTGGCCCGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp GGTCGGGCCAGGTCTGGGACCCAGAGCTGCCATGCACTCCCGCGCTCTCACAGAACCCCTCCTTTCCTCTaGCCGTTGATGAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: GRARSGTQSCHALPRSHRTPPFL*PLMRQP
Trigger: AGGCTGCCTCATCAACGGCAAGAGGAAAGGAGGGGT...TCTGTGAGAGCGCGGGAGTGCATGGCAGCTCTGGGTCCCAGACCTGGCCCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp TGGCTCCTTGGTGTGGGGCAGGGTAGGGTTTGGCAACAGCCTGGGCTTCATGCGGCCGGGAATTGTAGTTaGCGTAAGGGGCCTCCCCCG +
Preference number: 5 (lower is better)
Translates to: WLLGVGQGRVWQQPGLHAAGNCS*RKGPPP
Trigger: CGGGGGAGGCCCCTTACGCAAACTACAATTCCCGGC...CGCATGAAGCCCAGGCTGTTGCCAAACCCTACCCTGCCCCACACCAAGGAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000248451.7
CDS-3UTR CAA 90 bp CGTCAGAGCCCCCTCCTGCCAGCCGGATGGGGGCCTGGATCCAGTGGGAAATCAAGCACCTTCACTCCATaGAAGAGGCGGGGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: RQSPLLPAGWGPGSSGKSSTFTP*KRRGWV
Trigger: AACCCAGCCCCGCCTCTTCAATGGAGTGAAGGTGCT...TGATTTCCCACTGGATCCAGGCCCCCATCCGGCTGGCAGGAGGGGGCTCTGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp GGTCGGGCCAGGTCTGGGACCCAGAGCTGCCATGCACTCCCGCGCTCTCACAGAGGGCATCACTTGCTCTaGTGCATATCCTTCAGCCGG +
Preference number: 5 (lower is better)
Translates to: GRARSGTQSCHALPRSHRGHHLL*CISFSR
Trigger: CCGGCTGAAGGATATGCACAAGAGCAAGTGATGCCC...TCTGTGAGAGCGCGGGAGTGCATGGCAGCTCTGGGTCCCAGACCTGGCCCGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp GAGGAGGGGACCCTCCCAGTTGGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTCCTTTCCTCTTGCCGTaGATGAGGCAGCCTCGCGCT +
Preference number: 5 (lower is better)
Translates to: EEGTLPVGRVWRCPETPPPFLLP*MRQPRA
Trigger: AGCGCGAGGCTGCCTCATCAACGGCAAGAGGAAAGG...AGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGGGAGGGTCCCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp GAGGAGGGGACCCTCCCAGTTGGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTGTAGACCAGATGGCCTaGTGTGTGGCCAGGTGTAGC +
Preference number: 5 (lower is better)
Translates to: EEGTLPVGRVWRCPETPPVDQMA*CVARCS
Trigger: GCTACACCTGGCCACACACAAGGCCATCTGGTCTAC...AGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGGGAGGGTCCCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp GAGGGGGCCTTTGAGGGGATCGTGAGAGATGAACTTGCCAGGCAGACAAGGCAGGGGGATGATGCCCGCTaGGGTGCCGATGGAGGTGGT +
Preference number: 5 (lower is better)
Translates to: EGAFEGIVRDELARQTRQGDDAR*GADGGG
Trigger: ACCACCTCCATCGGCACCCAAGCGGGCATCATCCCC...CTGCCTTGTCTGCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGGCCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp AGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTGAGGACCACAGGGTTCCTCAGGGGACCCTCCCAGTaGGTAGGGTCTGGAGATGTC +
Preference number: 5 (lower is better)
Translates to: RGLLADSRYTCLRTTGFLRGPSQ*VGSGDV
Trigger: GACATCTCCAGACCCTACCAACTGGGAGGGTCCCCT...GAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGCAAGGAGGGGCCCTTTaGGCCCAGGGCAGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: TREALTKCRGSLEGRGTGQGGAL*AQGRGR
Trigger: TCTGCCTCTGCCCTGGGCCAAAAGGGCCCCTCCTTG...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp TTTGGCCTCACAGTCTCATCGCCTGATCCCTCCCCTCCCCTGAGCAGTGTGGGGGGGCATCACTTGCTCTaGTGCATATCCTTCAGCCGG +
Preference number: 5 (lower is better)
Translates to: FGLTVSSPDPSPPLSSVGGHHLL*CISFSR
Trigger: CCGGCTGAAGGATATGCACAAGAGCAAGTGATGCCC...CCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp TTTGGCCTCACAGTCTCATCGCCTGATCCCTCCCCTCCCCTGAGCAGTGTGGGGCGCTGGGGGCATCACTaGCTCTTGTGCATATCCTTC +
Preference number: 5 (lower is better)
Translates to: FGLTVSSPDPSPPLSSVGRWGHH*LLCISF
Trigger: GAAGGATATGCACAAGAGCAAGTGATGCCCCCAGCG...CCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp GACCTGCAAGACTGTGGGGCTCCACACTCCAGACTCCAGTGTCTCCTTAGCCCAAAGGATGATGAGGTGTaGGTGGTGGCGGCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: DLQDCGAPHSRLQCLLSPKDDEV*VVAASP
Trigger: TGGGGAGGCCGCCACCACCAACACCTCATCATCCTT...TGGGCTAAGGAGACACTGGAGTCTGGAGTGTGGAGCCCCACAGTCTTGCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp GAGGGGCTGAGCTTCTTTCCCAACCATGGATGGGGGAAGGGCAAGATGGACCCTAAGGATGATGAGGTGTaGGTGGTGGCGGCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: EGLSFFPNHGWGKGKMDPKDDEV*VVAASP
Trigger: TGGGGAGGCCGCCACCACCAACACCTCATCATCCTT...AGGGTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAGCTCAGCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp AGAGGGCTCCTGGCTGACTCAAGGTACACCTGCCTGAGGACCACAGGGTTCCTCACAGGCCCCCTTCTTTaGGCCTCACAGTCTCATCGC +
Preference number: 5 (lower is better)
Translates to: RGLLADSRYTCLRTTGFLTGPLL*ASQSHR
Trigger: GCGATGAGACTGTGAGGCCAAAAGAAGGGGGCCTGT...GAGGAACCCTGTGGTCCTCAGGCAGGTGTACCTTGAGTCAGCCAGGAGCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTCAAGGAGGGGCCCTTTaGGCCCAGGGCAGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPQGGAL*AQGRGR
Trigger: TCTGCCTCTGCCCTGGGCCAAAAGGGCCCCTCCTTG...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS GCA 90 bp AAATCGCCACCGAGGTGGCACCTTTGGAAGCCACTTCCACGTCACTaGGGGCTCATCACCCTGGTGCCAGGACGAAAAGCTTCGCTGTTC +
Preference number: 5 (lower is better)
Translates to: KSPPRWHLWKPLPRH*GLITLVPGRKASLF
Trigger: GAACAGCGAAGCTTTTCGTCCTGGCACCAGGGTGATGAGCCCGCAGTGACGTGGAAGTGGCTTCCAAAGGTGCCACCTCGGTGGCGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS CCA 90 bp GGCACCTTTGGAAGCCACTTCCACGTCACTGCGGGCTCATCACCCTaGTGCCAGGACGAAAAGCTTCGCTGTTCTTCCTCAGACGACAGC +
Preference number: 5 (lower is better)
Translates to: GTFGSHFHVTAGSSP*CQDEKLRCSSSDDS
Trigger: GCTGTCGTCTGAGGAAGAACAGCGAAGCTTTTCGTCCTGGCACCAGGGTGATGAGCCCGCAGTGACGTGGAAGTGGCTTCCAAAGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS-3UTR CAA 90 bp GAGGGGGCCTTTGAGGGGATCGTGAGAGATGAACTTGCCAGGCAGACAAGGCAGAGCATGGTCTCTGCATaGCCCTCAAAGGTCCGCCCA +
Preference number: 5 (lower is better)
Translates to: EGAFEGIVRDELARQTRQSMVSA*PSKVRP
Trigger: TGGGCGGACCTTTGAGGGCAATGCAGAGACCATGCT...CTGCCTTGTCTGCCTGGCAAGTTCATCTCTCACGATCCCCTCAAAGGCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCCCTTTCCTCTTGCCGTaGATGAGGCAGCCTCGCGCT +
Preference number: 5 (lower is better)
Translates to: SATREALTKCRGSLEGRGPFLLP*MRQPRA
Trigger: AGCGCGAGGCTGCCTCATCAACGGCAAGAGGAAAGG...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp GAGGGGCTGAGCTTCTTTCCCAACCATGGATGGGGGAAGGGCAAGATGGACCCTACCCCTCCTTTCCTCTaGCCGTTGATGAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: EGLSFFPNHGWGKGKMDPTPPFL*PLMRQP
Trigger: AGGCTGCCTCATCAACGGCAAGAGGAAAGGAGGGGT...AGGGTCCATCTTGCCCTTCCCCCATCCATGGTTGGGAAAGAAGCTCAGCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp GAGGAGGGGACCCTCCCAGTTGGTAGGGTCTGGAGATGTCCCGAGACCCCTCCTGCCACAAGAGAAGCATaGACAAAGTGCAGAGGTAGC +
Preference number: 5 (lower is better)
Translates to: EEGTLPVGRVWRCPETPPATREA*TKCRGS
Trigger: GCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGC...AGGAGGGGTCTCGGGACATCTCCAGACCCTACCAACTGGGAGGGTCCCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGAGCATGGTCTCTGCATaGCCCTCAAAGGTCCGCCCA +
Preference number: 5 (lower is better)
Translates to: TREALTKCRGSLEGRGTGSMVSA*PSKVRP
Trigger: TGGGCGGACCTTTGAGGGCAATGCAGAGACCATGCT...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp TTTGGCCTCACAGTCTCATCGCCTGATCCCTCCCCTCCCCTGAGCAGTGTGGGGAATGAGGAGGTTTCCTaGGCAATCAGGACCCTCCTT +
Preference number: 5 (lower is better)
Translates to: FGLTVSSPDPSPPLSSVGNEEVS*AIRTLL
Trigger: AAGGAGGGTCCTGATTGCCAAGGAAACCTCCTCATT...CCCCACACTGCTCAGGGGAGGGGAGGGATCAGGCGATGAGACTGTGAGGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS TCA 90 bp CACTGTGGTCCCAGTGCTTGTGAGTACACAGAATGGCGACCAAGGTaGCCCCTTCCTTTTCAATGGAAGCCTGCACAGCCCGAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: HCGPSACEYTEWRPR*PLPFQWKPAQPEGL
Trigger: CAGACCCTCGGGCTGTGCAGGCTTCCATTGAAAAGGAAGGGGTCACCTTGGTCGCCATTCTGTGTACTCACAAGCACTGGGACCACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258362.7
ENST00000273077.9
ENST00000436005.2
CDS GCA 90 bp ACCTTTGGAAGCCACTTCCACGTCACTGCGGGCTCATCACCCTGGTaGCAGGACGAAAAGCTTCGCTGTTCTTCCTCAGACGACAGCATG +
Preference number: 5 (lower is better)
Translates to: TFGSHFHVTAGSSPW*QDEKLRCSSSDDSM
Trigger: CATGCTGTCGTCTGAGGAAGAACAGCGAAGCTTTTCGTCCTGGCACCAGGGTGATGAGCCCGCAGTGACGTGGAAGTGGCTTCCAAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS CCA 90 bp AGAATCCAAAGGGAAATGGGAAAATCGCCACCGAGGTGGCACCTTTaGAAGCCACTTCCACGTCACTGCGGGCTCATCACCCTGGTGCCA +
Preference number: 5 (lower is better)
Translates to: RIQREMGKSPPRWHL*KPLPRHCGLITLVP
Trigger: TGGCACCAGGGTGATGAGCCCGCAGTGACGTGGAAGTGGCTTCCAAAGGTGCCACCTCGGTGGCGATTTTCCCATTTCCCTTTGGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS CCA 90 bp GTGCCAAGGAGAATCCAAAGGGAAATGGGAAAATCGCCACCGAGGTaGCACCTTTGGAAGCCACTTCCACGTCACTGCGGGCTCATCACC +
Preference number: 5 (lower is better)
Translates to: VPRRIQREMGKSPPR*HLWKPLPRHCGLIT
Trigger: GGTGATGAGCCCGCAGTGACGTGGAAGTGGCTTCCAAAGGTGCCACCTCGGTGGCGATTTTCCCATTTCCCTTTGGATTCTCCTTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS-3UTR CAA 90 bp ACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCACAGGGCACGCTGACCACATCTaGATGACACAGGGGATGGGT +
Preference number: 5 (lower is better)
Translates to: TREALTKCRGSLEGRGTGHADHI*MTQGMG
Trigger: ACCCATCCCCTGTGTCATCAAGATGTGGTCAGCGTG...CCCTGTGCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp AGGGCAGGCTTTGACACAGGAAAAGAGGGCTCCTGGCTGACTCAAGGTACACCTACAGGCCCCCTTCTTTaGGCCTCACAGTCTCATCGC +
Preference number: 5 (lower is better)
Translates to: RAGFDTGKEGSWLTQGTPTGPLL*ASQSHR
Trigger: GCGATGAGACTGTGAGGCCAAAAGAAGGGGGCCTGT...AGGTGTACCTTGAGTCAGCCAGGAGCCCTCTTTTCCTGTGTCAAAGCCTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp GACCTGCAAGACTGTGGGGCTCCACACTCCAGACTCCAGTGTCTCCTTAGCCCAAATGAGGAGGTTTCCTaGGCAATCAGGACCCTCCTT +
Preference number: 5 (lower is better)
Translates to: DLQDCGAPHSRLQCLLSPNEEVS*AIRTLL
Trigger: AAGGAGGGTCCTGATTGCCAAGGAAACCTCCTCATT...TGGGCTAAGGAGACACTGGAGTCTGGAGTGTGGAGCCCCACAGTCTTGCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS-3UTR CAA 90 bp AGTGCCACAAGAGAAGCATTGACAAAGTGCAGAGGTAGCCTGGAGGGGAGGGGCGCCACAAGAGAAGCATaGACAAAGTGCAGAGGTAGC +
Preference number: 5 (lower is better)
Translates to: SATREALTKCRGSLEGRGATREA*TKCRGS
Trigger: GCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGC...GCCCCTCCCCTCCAGGCTACCTCTGCACTTTGTCAATGCTTCTCTTGTGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS TCA 90 bp TCAGACCTGAACCAACCTGACAGTCTCCTACCTCACGGGCAGGGCTaGAGAAAACTGCTGTGTCATATGACTCAGGGCTGCGATGGTTCA +
Preference number: 5 (lower is better)
Translates to: SDLNQPDSLLPHGQG*RKLLCHMTQGCDGS
Trigger: TGAACCATCGCAGCCCTGAGTCATATGACACAGCAGTTTTCTTCAGCCCTGCCCGTGAGGTAGGAGACTGTCAGGTTGGTTCAGGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494954.1
CDS CCA 90 bp GGAGAGCCTGCCTCCATCTTTGCACCGTGGCTCACGCTTGATGACTaGTGCTTGGTTGGCATTCAGGAAATCACTGGTGGTGATGATGAT +
Preference number: 5 (lower is better)
Translates to: GEPASIFAPWLTLDD*CLVGIQEITGGDDD
Trigger: ATCATCATCACCACCAGTGATTTCCTGAATGCCAACCAAGCACCAGTCATCAAGCGTGAGCCACGGTGCAAAGATGGAGGCAGGCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472650.1
CDS-3UTR CAA 90 bp GGAAATCACATGGGAATATGGCTGGCAAACTGCAAAGGGCCAGATGAGTGTCAGAGCACCTTCACTCCATaGAAGAGGCGGGGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: GNHMGIWLANCKGPDECQSTFTP*KRRGWV
Trigger: AACCCAGCCCCGCCTCTTCAATGGAGTGAAGGTGCT...CTGACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS GCA 90 bp GAGCCTGCCTCCATCTTTGCACCGTGGCTCACGCTTGATGACTGGTaGTTGGTTGGCATTCAGGAAATCACTGGTGGTGATGATGATGAT +
Preference number: 5 (lower is better)
Translates to: EPASIFAPWLTLDDW*LVGIQEITGGDDDD
Trigger: ATCATCATCATCACCACCAGTGATTTCCTGAATGCCAACCAAGCACCAGTCATCAAGCGTGAGCCACGGTGCAAAGATGGAGGCAGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472650.1
CDS-3UTR CAA 90 bp GGAAATCACATGGGAATATGGCTGGCAAACTGCAAAGGGCCAGATGAGTGTCAGCGCTGGGGGCATCACTaGCTCTTGTGCATATCCTTC +
Preference number: 5 (lower is better)
Translates to: GNHMGIWLANCKGPDECQRWGHH*LLCISF
Trigger: GAAGGATATGCACAAGAGCAAGTGATGCCCCCAGCG...CTGACACTCATCTGGCCCTTTGCAGTTTGCCAGCCATATTCCCATGTGATTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS CCA 90 bp GGTGCCAGGACGAAAAGCTTCGCTGTTCTTCCTCAGACGACAGCATaGGAAGGACTGCAGTGGGACTCACATAAGACGTATGAAGGAAAT +
Preference number: 5 (lower is better)
Translates to: GARTKSFAVLPQTTA*EGLQWDSHKTYEGN
Trigger: ATTTCCTTCATACGTCTTATGTGAGTCCCACTGCAGTCCTTCCCATGCTGTCGTCTGAGGAAGAACAGCGAAGCTTTTCGTCCTGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS CCA 90 bp CTGCCTCCATCTTTGCACCGTGGCTCACGCTTGATGACTGGTGCTTaGTTGGCATTCAGGAAATCACTGGTGGTGATGATGATGATGATG +
Preference number: 5 (lower is better)
Translates to: LPPSLHRGSRLMTGA*LAFRKSLVVMMMMM
Trigger: CATCATCATCATCATCACCACCAGTGATTTCCTGAATGCCAACCAAGCACCAGTCATCAAGCGTGAGCCACGGTGCAAAGATGGAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472650.1
CDS GCA 90 bp CGAAAAGCTTCGCTGTTCTTCCTCAGACGACAGCATGGGAAGGACTaGAGTGGGACTCACATAAGACGTATGAAGGAAATCCGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: RKASLFFLRRQHGKD*SGTHIRRMKEIREK
Trigger: CTTTTCCCGGATTTCCTTCATACGTCTTATGTGAGTCCCACTGCAGTCCTTCCCATGCTGTCGTCTGAGGAAGAACAGCGAAGCTTTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS CCA 90 bp AGCTTCGCTGTTCTTCCTCAGACGACAGCATGGGAAGGACTGCAGTaGGACTCACATAAGACGTATGAAGGAAATCCGGGAAAAGGTTTT +
Preference number: 5 (lower is better)
Translates to: SFAVLPQTTAWEGLQ*DSHKTYEGNPGKGF
Trigger: AAAACCTTTTCCCGGATTTCCTTCATACGTCTTATGTGAGTCCCACTGCAGTCCTTCCCATGCTGTCGTCTGAGGAAGAACAGCGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS TCA 72 bp ACCCGATTCGGAAGAGCAGCCGCTGGCTGTGCGCCATaGGCAGACCGCGGAGGCCCCGCCGCGCTCGGCAGC +
Preference number: 6 (lower is better)
Translates to: TRFGRAAAGCAP*ADRGGPAALGS
Trigger: GCTGCCGAGCGCGGCGGGGCCTCCGCGGTCTGCTCATGGCGCACAGCCAGCGGCTGCTCTTCCGAATCGGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258362.7
CDS TCA 72 bp GGCTCCCGTACACCCGACAGTCCCGGTGCCGCCGGCTaGGGTCACGGTTCCCTCCACTGTGGTCCCAGTGCT +
Preference number: 6 (lower is better)
Translates to: GSRTPDSPGAAG*GHGSLHCGPSA
Trigger: AGCACTGGGACCACAGTGGAGGGAACCGTGACCTCAGCCGGCGGCACCGGGACTGTCGGGTGTACGGGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258362.7
ENST00000273077.9
ENST00000436005.2
CDS GCA 72 bp GATGGGCACGTGCCCTTGCGCTCCAGCCGCTGCCGCTaGACCCACTGCATCTTCCTCTCCCGGGCCAGGTTC +
Preference number: 6 (lower is better)
Translates to: DGHVPLRSSRCR*THCIFLSRARF
Trigger: GAACCTGGCCCGGGAGAGGAAGATGCAGTGGGTGCAGCGGCAGCGGCTGGAGCGCAAGGGCACGTGCCCATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258362.7
ENST00000273077.9
ENST00000436005.2
CDS CCA 72 bp GTGTACAGGCTGTACCCGATTCGGAAGAGCAGCCGCTaGCTGTGCGCCATGAGCAGACCGCGGAGGCCCCGC +
Preference number: 6 (lower is better)
Translates to: VYRLYPIRKSSR*LCAMSRPRRPR
Trigger: GCGGGGCCTCCGCGGTCTGCTCATGGCGCACAGCCAGCGGCTGCTCTTCCGAATCGGGTACAGCCTGTACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258362.7
CDS CCA 72 bp ATCTCTGGCCCCGGCCGTCCTCAATGGGCCCAGTCCTaGCAAGCCCAGCTGGGACAAGGGTGGGCCAGGGAA +
Preference number: 6 (lower is better)
Translates to: ISGPGRPQWAQS*QAQLGQGWARE
Trigger: TTCCCTGGCCCACCCTTGTCCCAGCTGGGCTTGCCAGGACTGGGCCCATTGAGGACGGCCGGGGCCAGAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483797.1
CDS GCA 72 bp CTGGGCTGGGGGCGCTGGGGGCATCACTTGCTCTTGTaGATATCCTTCAGCCGGCGGAGCTCTTCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: LGWGRWGHHLLL*ISFSRRSSSRS
Trigger: GCTCCTGGAAGAGCTCCGCCGGCTGAAGGATATGCACAAGAGCAAGTGATGCCCCCAGCGCCCCCAGCCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000258362.7
ENST00000273077.9
CDS CAA 72 bp GCGCGGGAGTCCAACAGGCTTCCTAGGAGCTCCCTCTaGCAGCAAGACCCCGGAGGTGTCGAGCAACCCGAA +
Preference number: 6 (lower is better)
Translates to: ARESNRLPRSSL*QQDPGGVEQPE
Trigger: TTCGGGTTGCTCGACACCTCCGGGGTCTTGCTGCAAGAGGGAGCTCCTAGGAAGCCTGTTGGACTCCCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS GCA 72 bp CCTCTCCCGGGCCAGGTTCTCGGGCTCCACCACACCTaGAAAGCCCAGGTTCTCCTCTGCATACTCATGACC +
Preference number: 6 (lower is better)
Translates to: PLPGQVLGLHHT*KAQVLLCILMT
Trigger: GGTCATGAGTATGCAGAGGAGAACCTGGGCTTTGCAGGTGTGGTGGAGCCCGAGAACCTGGCCCGGGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258362.7
ENST00000273077.9
ENST00000436005.2
CDS CAA 72 bp GGCCCGGATCTGAAGCCGTCCCACGCTGACCACATCTaGATGACACAGGGGATGGGTGAGGTAGGGGATGCC +
Preference number: 6 (lower is better)
Translates to: GPDLKPSHADHI*MTQGMGEVGDA
Trigger: GGCATCCCCTACCTCACCCATCCCCTGTGTCATCAAGATGTGGTCAGCGTGGGACGGCTTCAGATCCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258362.7
ENST00000273077.9
ENST00000436005.2
CDS CAA 90 bp CAGGTCTGGCCTGTGATGTGGGTTCCTGGGTTGGGGTGGGGGTTCTaGTGTCTCCTCCTTGTTCCACCTGTCATCCCAGGCTGCCTGTCC +
Preference number: 6 (lower is better)
Translates to: QVWPVMWVPGLGWGF*CLLLVPPVIPGCLS
Trigger: GGACAGGCAGCCTGGGATGACAGGTGGAACAAGGAGGAGACACAAGAACCCCCACCCCAACCCAGGAACCCACATCACAGGCCAGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472650.1
CDS TCA 72 bp GGGCCAGGGAAGACGGGAGCCCCTTACCAGTGCTTGTaGGTACACAGAATGGCGACCAAGGTGACCCCTTCC +
Preference number: 6 (lower is better)
Translates to: GPGKTGAPYQCL*VHRMATKVTPS
Trigger: GGAAGGGGTCACCTTGGTCGCCATTCTGTGTACTCACAAGCACTGGTAAGGGGCTCCCGTCTTCCCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483797.1
CDS GCA 72 bp GAACTCAAACCTCCAGAAGCCCGGGGCTCTTTCCTCTaGACTGCGGTGAGTGTGAAACACCTGGAGCGCGGG +
Preference number: 6 (lower is better)
Translates to: ELKPPEARGSFL*TAVSVKHLERG
Trigger: CCCGCGCTCCAGGTGTTTCACACTCACCGCAGTGCAGAGGAAAGAGCCCCGGGCTTCTGGAGGTTTGAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS GCA 72 bp CCGAGGTGGCACCTTTGGAAGCCACTTCCACGTCACTaGGGGCTCATCACCCTGGTGCCAGGACGAAAAGCT +
Preference number: 6 (lower is better)
Translates to: PRWHLWKPLPRH*GLITLVPGRKA
Trigger: AGCTTTTCGTCCTGGCACCAGGGTGATGAGCCCGCAGTGACGTGGAAGTGGCTTCCAAAGGTGCCACCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS GCA 72 bp AGTTTGCGTAAGGGGCCTCCCCCGCTCCTTCCGTCCTaGCTACAGACCAGAAACTACATCTCCCAGAAGCCC +
Preference number: 6 (lower is better)
Translates to: SLRKGPPPLLPS*LQTRNYISQKP
Trigger: GGGCTTCTGGGAGATGTAGTTTCTGGTCTGTAGGCAGGACGGAAGGAGCGGGGGAGGCCCCTTACGCAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000248451.7
CDS CAA 90 bp GAGAATCCAAAGGGAAATGGGAAAATCGCCACCGAGGTGGCACCTTaGGAAGCCACTTCCACGTCACTGCGGGCTCATCACCCTGGTGCC +
Preference number: 6 (lower is better)
Translates to: ENPKGNGKIATEVAP*EATSTSLRAHHPGA
Trigger: GGCACCAGGGTGATGAGCCCGCAGTGACGTGGAAGTGGCTTCCAAAGGTGCCACCTCGGTGGCGATTTTCCCATTTCCCTTTGGATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS GCA 72 bp GGGCTCCACCACACCTGCAAAGCCCAGGTTCTCCTCTaGATACTCATGACCAGGCCACAGAAGGGTGTCATC +
Preference number: 6 (lower is better)
Translates to: GLHHTCKAQVLL*ILMTRPQKGVI
Trigger: GATGACACCCTTCTGTGGCCTGGTCATGAGTATGCAGAGGAGAACCTGGGCTTTGCAGGTGTGGTGGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258362.7
ENST00000273077.9
ENST00000436005.2
CDS GCA 72 bp AGCCACTTCCACGTCACTGCGGGCTCATCACCCTGGTaGCAGGACGAAAAGCTTCGCTGTTCTTCCTCAGAC +
Preference number: 6 (lower is better)
Translates to: SHFHVTAGSSPW*QDEKLRCSSSD
Trigger: GTCTGAGGAAGAACAGCGAAGCTTTTCGTCCTGGCACCAGGGTGATGAGCCCGCAGTGACGTGGAAGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS CCA 72 bp GGAAGCCACTTCCACGTCACTGCGGGCTCATCACCCTaGTGCCAGGACGAAAAGCTTCGCTGTTCTTCCTCA +
Preference number: 6 (lower is better)
Translates to: GSHFHVTAGSSP*CQDEKLRCSSS
Trigger: TGAGGAAGAACAGCGAAGCTTTTCGTCCTGGCACCAGGGTGATGAGCCCGCAGTGACGTGGAAGTGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS CCA 72 bp AGGGAAATGGGAAAATCGCCACCGAGGTGGCACCTTTaGAAGCCACTTCCACGTCACTGCGGGCTCATCACC +
Preference number: 6 (lower is better)
Translates to: REMGKSPPRWHL*KPLPRHCGLIT
Trigger: GGTGATGAGCCCGCAGTGACGTGGAAGTGGCTTCCAAAGGTGCCACCTCGGTGGCGATTTTCCCATTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS CAA 72 bp AAGGGAAATGGGAAAATCGCCACCGAGGTGGCACCTTaGGAAGCCACTTCCACGTCACTGCGGGCTCATCAC +
Preference number: 6 (lower is better)
Translates to: KGNGKIATEVAP*EATSTSLRAHH
Trigger: GTGATGAGCCCGCAGTGACGTGGAAGTGGCTTCCAAAGGTGCCACCTCGGTGGCGATTTTCCCATTTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS CAA 90 bp ACTGGCCTGAGAGGTTCCCTTAGAATGGAGAGCCTGCCTCCATCTTaGCACCGTGGCTCACGCTTGATGACTGGTGCTTGGTTGGCATTC +
Preference number: 6 (lower is better)
Translates to: TGLRGSLRMESLPPS*HRGSRLMTGAWLAF
Trigger: GAATGCCAACCAAGCACCAGTCATCAAGCGTGAGCCACGGTGCAAAGATGGAGGCAGGCTCTCCATTCTAAGGGAACCTCTCAGGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472650.1
CDS TCA 72 bp CCCAGTGCTTGTGAGTACACAGAATGGCGACCAAGGTaGCCCCTTCCTTTTCAATGGAAGCCTGCACAGCCC +
Preference number: 6 (lower is better)
Translates to: PSACEYTEWRPR*PLPFQWKPAQP
Trigger: GGGCTGTGCAGGCTTCCATTGAAAAGGAAGGGGTCACCTTGGTCGCCATTCTGTGTACTCACAAGCACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258362.7
ENST00000273077.9
ENST00000436005.2
CDS CCA 72 bp TGGTTCAGGCCATCCCAAGTCCCTGATACCAGTGCTTaGCAGTTCCGTTTTGCTGAGGCCCCATCTCATCTG +
Preference number: 6 (lower is better)
Translates to: WFRPSQVPDTSA*QFRFAEAPSHL
Trigger: CAGATGAGATGGGGCCTCAGCAAAACGGAACTGCCAAGCACTGGTATCAGGGACTTGGGATGGCCTGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494954.1
CDS CAA 72 bp AGAGGTTCCCTTAGAATGGAGAGCCTGCCTCCATCTTaGCACCGTGGCTCACGCTTGATGACTGGTGCTTGG +
Preference number: 6 (lower is better)
Translates to: RGSLRMESLPPS*HRGSRLMTGAW
Trigger: CCAAGCACCAGTCATCAAGCGTGAGCCACGGTGCAAAGATGGAGGCAGGCTCTCCATTCTAAGGGAACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472650.1
CDS TCA 72 bp ACCAGTGCTTGTGAGTACACAGAATGGCGACCAAGGTaGCCCCTTCCTTTTCAATGGAAGCCTGCACAGCCC +
Preference number: 6 (lower is better)
Translates to: TSACEYTEWRPR*PLPFQWKPAQP
Trigger: GGGCTGTGCAGGCTTCCATTGAAAAGGAAGGGGTCACCTTGGTCGCCATTCTGTGTACTCACAAGCACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483797.1
CDS CCA 72 bp GCCTCCATCTTTGCACCGTGGCTCACGCTTGATGACTaGTGCTTGGTTGGCATTCAGGAAATCACTGGTGGT +
Preference number: 6 (lower is better)
Translates to: ASIFAPWLTLDD*CLVGIQEITGG
Trigger: ACCACCAGTGATTTCCTGAATGCCAACCAAGCACCAGTCATCAAGCGTGAGCCACGGTGCAAAGATGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472650.1
CDS CAA 90 bp CTTAGAATGGAGAGCCTGCCTCCATCTTTGCACCGTGGCTCACGCTaGATGACTGGTGCTTGGTTGGCATTCAGGAAATCACTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: LRMESLPPSLHRGSR*MTGAWLAFRKSLVV
Trigger: CACCACCAGTGATTTCCTGAATGCCAACCAAGCACCAGTCATCAAGCGTGAGCCACGGTGCAAAGATGGAGGCAGGCTCTCCATTCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472650.1
CDS GCA 72 bp TCCATCTTTGCACCGTGGCTCACGCTTGATGACTGGTaGTTGGTTGGCATTCAGGAAATCACTGGTGGTGAT +
Preference number: 6 (lower is better)
Translates to: SIFAPWLTLDDW*LVGIQEITGGD
Trigger: ATCACCACCAGTGATTTCCTGAATGCCAACCAAGCACCAGTCATCAAGCGTGAGCCACGGTGCAAAGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472650.1
CDS CCA 72 bp GTTCTTCCTCAGACGACAGCATGGGAAGGACTGCAGTaGGACTCACATAAGACGTATGAAGGAAATCCGGGA +
Preference number: 6 (lower is better)
Translates to: VLPQTTAWEGLQ*DSHKTYEGNPG
Trigger: TCCCGGATTTCCTTCATACGTCTTATGTGAGTCCCACTGCAGTCCTTCCCATGCTGTCGTCTGAGGAAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS CCA 72 bp TCTTTGCACCGTGGCTCACGCTTGATGACTGGTGCTTaGTTGGCATTCAGGAAATCACTGGTGGTGATGATG +
Preference number: 6 (lower is better)
Translates to: SLHRGSRLMTGA*LAFRKSLVVMM
Trigger: CATCATCACCACCAGTGATTTCCTGAATGCCAACCAAGCACCAGTCATCAAGCGTGAGCCACGGTGCAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472650.1
CDS GCA 72 bp TCGCTGTTCTTCCTCAGACGACAGCATGGGAAGGACTaGAGTGGGACTCACATAAGACGTATGAAGGAAATC +
Preference number: 6 (lower is better)
Translates to: SLFFLRRQHGKD*SGTHIRRMKEI
Trigger: GATTTCCTTCATACGTCTTATGTGAGTCCCACTGCAGTCCTTCCCATGCTGTCGTCTGAGGAAGAACAGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS CCA 72 bp ACGAAAAGCTTCGCTGTTCTTCCTCAGACGACAGCATaGGAAGGACTGCAGTGGGACTCACATAAGACGTAT +
Preference number: 6 (lower is better)
Translates to: TKSFAVLPQTTA*EGLQWDSHKTY
Trigger: ATACGTCTTATGTGAGTCCCACTGCAGTCCTTCCCATGCTGTCGTCTGAGGAAGAACAGCGAAGCTTTTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS CAA 72 bp ATCTTTGCACCGTGGCTCACGCTTGATGACTGGTGCTaGGTTGGCATTCAGGAAATCACTGGTGGTGATGAT +
Preference number: 6 (lower is better)
Translates to: IFAPWLTLDDWC*VGIQEITGGDD
Trigger: ATCATCACCACCAGTGATTTCCTGAATGCCAACCAAGCACCAGTCATCAAGCGTGAGCCACGGTGCAAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472650.1
CDS CAA 72 bp ACTGGAAGGGACCTTAAAGATAGTCTACTCCATCCCTaGCACTGTACGGAAGAGGAAACTGAAGCCCTGAGA +
Preference number: 6 (lower is better)
Translates to: TGRDLKDSLLHP*HCTEEETEALR
Trigger: TCTCAGGGCTTCAGTTTCCTCTTCCGTACAGTGCAAGGGATGGAGTAGACTATCTTTAAGGTCCCTTCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS CAA 90 bp AATGTTAGCACTGGAAGGGACCTTAAAGATAGTCTACTCCATCCCTaGCACTGTACGGAAGAGGAAACTGAAGCCCTGAGAGAAAAACTG +
Preference number: 6 (lower is better)
Translates to: NVSTGRDLKDSLLHP*HCTEEETEALREKL
Trigger: CAGTTTTTCTCTCAGGGCTTCAGTTTCCTCTTCCGTACAGTGCAAGGGATGGAGTAGACTATCTTTAAGGTCCCTTCCAGTGCTAACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469689.1
CDS CAA 90 bp AGTGGGACTCACATAAGACGTATGAAGGAAATCCGGGAAAAGGTTTaGAAACTGCAAATGTTAGCACTGGAAGGGACCTTAAAGATAGTC +
Preference number: 6 (lower is better)
Translates to: SGTHIRRMKEIREKV*KLQMLALEGTLKIV
Trigger: GACTATCTTTAAGGTCCCTTCCAGTGCTAACATTTGCAGTTTCAAAACCTTTTCCCGGATTTCCTTCATACGTCTTATGTGAGTCCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469689.1