RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PNISR (Homo sapiens)

Ensembl gene IDs: ENSG00000132424

Ensembl transcript IDs: ENST00000369239.10, ENST00000438806.5, ENST00000460600.1, ENST00000463021.1, ENST00000466057.1, ENST00000476159.1, ENST00000478777.5, ENST00000481229.2, ENST00000492294.5, ENST00000498075.1, ENST00000647811.1, ENST00000679525.1, ENST00000681611.1, ENST00000681615.1

Found 806 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATCTCGACTCCTACTGCGACTGGCACGATTGGTTCGTCTATCCCTTaGGCGACTTCTACTTCTACGTCTCTCTCGGGAAGGACTCCGATT +
Preference number: 1 (lower is better)
Translates to: ISTPTATGTIGSSIP*ATSTSTSLSGRTPI
Trigger: AATCGGAGTCCTTCCCGAGAGAGACGTAGAAGTAGAAGTCGCTCAAGGGATAGACGAACCAATCGTGCCAGTCGCAGTAGGAGTCGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR CCA 90 bp CTCCTCTTCAGTCATCTCAGGGTCACTGTGCTCTTCTTGAGGAACTaGGGATGGACTTCTGGTGACTTTCCCACTACTTGCAGCCTCAAC +
Preference number: 1 (lower is better)
Translates to: LLFSHLRVTVLFLRN*GWTSGDFPTTCSLN
Trigger: GTTGAGGCTGCAAGTAGTGGGAAAGTCACCAGAAGTCCATCCCCAGTTCCTCAAGAAGAGCACAGTGACCCTGAGATGACTGAAGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR TCA 90 bp CAGGGTCACTGTGCTCTTCTTGAGGAACTGGGGATGGACTTCTGGTaGCTTTCCCACTACTTGCAGCCTCAACATTTTCAGTGTCTTCTT +
Preference number: 1 (lower is better)
Translates to: QGHCALLEELGMDFW*LSHYLQPQHFQCLL
Trigger: AAGAAGACACTGAAAATGTTGAGGCTGCAAGTAGTGGGAAAGTCACCAGAAGTCCATCCCCAGTTCCTCAAGAAGAGCACAGTGACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR CCA 90 bp TTCAGTCATCTCAGGGTCACTGTGCTCTTCTTGAGGAACTGGGGATaGACTTCTGGTGACTTTCCCACTACTTGCAGCCTCAACATTTTC +
Preference number: 1 (lower is better)
Translates to: FSHLRVTVLFLRNWG*TSGDFPTTCSLNIF
Trigger: GAAAATGTTGAGGCTGCAAGTAGTGGGAAAGTCACCAGAAGTCCATCCCCAGTTCCTCAAGAAGAGCACAGTGACCCTGAGATGACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR CCA 90 bp CATCAATTTTACGCCTATCTCGACTCCTACTGCGACTGGCACGATTaGTTCGTCTATCCCTTGAGCGACTTCTACTTCTACGTCTCTCTC +
Preference number: 1 (lower is better)
Translates to: HQFYAYLDSYCDWHD*FVYPLSDFYFYVSL
Trigger: GAGAGAGACGTAGAAGTAGAAGTCGCTCAAGGGATAGACGAACCAATCGTGCCAGTCGCAGTAGGAGTCGAGATAGGCGTAAAATTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR TCA 90 bp CGGGACTTAGACTTGTGTTTGCGGCTTGCCTTCTTACCAGACCTTTaGGATTTCTCCACGGATCGCGATCGACTATGTTTAGGCTTCTTA +
Preference number: 1 (lower is better)
Translates to: RDLDLCLRLAFLPDL*DFSTDRDRLCLGFL
Trigger: TAAGAAGCCTAAACATAGTCGATCGCGATCCGTGGAGAAATCTCAAAGGTCTGGTAAGAAGGCAAGCCGCAAACACAAGTCTAAGTCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR GCA 90 bp GATTTCCACGTTGATCATCAATTTTACGCCTATCTCGACTCCTACTaGGACTGGCACGATTGGTTCGTCTATCCCTTGAGCGACTTCTAC +
Preference number: 1 (lower is better)
Translates to: DFHVDHQFYAYLDSY*DWHDWFVYPLSDFY
Trigger: GTAGAAGTCGCTCAAGGGATAGACGAACCAATCGTGCCAGTCGCAGTAGGAGTCGAGATAGGCGTAAAATTGATGATCAACGTGGAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR CCA 90 bp CACGTTGATCATCAATTTTACGCCTATCTCGACTCCTACTGCGACTaGCACGATTGGTTCGTCTATCCCTTGAGCGACTTCTACTTCTAC +
Preference number: 1 (lower is better)
Translates to: HVDHQFYAYLDSYCD*HDWFVYPLSDFYFY
Trigger: GTAGAAGTAGAAGTCGCTCAAGGGATAGACGAACCAATCGTGCCAGTCGCAGTAGGAGTCGAGATAGGCGTAAAATTGATGATCAACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR CCA 90 bp TCTGCGAGAATAGCTTCTACTCCTGCTACGTCTAGCTTTGATTGTTaGAGATCTACTCCTACTGTGTCTCTTTTTCCTTTTAGGAGAAGA +
Preference number: 1 (lower is better)
Translates to: SARIASTPATSSFDC*RSTPTVSLFPFRRR
Trigger: TCTTCTCCTAAAAGGAAAAAGAGACACAGTAGGAGTAGATCTCCAACAATCAAAGCTAGACGTAGCAGGAGTAGAAGCTATTCTCGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR TCA 90 bp CACAATCGTTCCTTACAAATAACTCTACTGGTGCACTGGCTTGATTaGTTCCAGCAATTTCATTTTACAGGAGTGAACCACACGTTATAC +
Preference number: 1 (lower is better)
Translates to: HNRSLQITLLVHWLD*FQQFHFTGVNHTLY
Trigger: GTATAACGTGTGGTTCACTCCTGTAAAATGAAATTGCTGGAATCAATCAAGCCAGTGCACCAGTAGAGTTATTTGTAAGGAACGATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR CAA 90 bp TATCTCGACTCCTACTGCGACTGGCACGATTGGTTCGTCTATCCCTaGAGCGACTTCTACTTCTACGTCTCTCTCGGGAAGGACTCCGAT +
Preference number: 2 (lower is better)
Translates to: YLDSYCDWHDWFVYP*SDFYFYVSLGKDSD
Trigger: ATCGGAGTCCTTCCCGAGAGAGACGTAGAAGTAGAAGTCGCTCAAGGGATAGACGAACCAATCGTGCCAGTCGCAGTAGGAGTCGAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR CAA 90 bp ATACTCTTTCTCCTCTTCAGTCATCTCAGGGTCACTGTGCTCTTCTaGAGGAACTGGGGATGGACTTCTGGTGACTTTCCCACTACTTGC +
Preference number: 2 (lower is better)
Translates to: ILFLLFSHLRVTVLF*RNWGWTSGDFPTTC
Trigger: GCAAGTAGTGGGAAAGTCACCAGAAGTCCATCCCCAGTTCCTCAAGAAGAGCACAGTGACCCTGAGATGACTGAAGAGGAGAAAGAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR GCA 90 bp TTTGCGGCTTGCCTTCTTACCAGACCTTTGAGATTTCTCCACGGATCGCGATCGAAGCGGGAAGAGTCCTaGGTTTTACTGCGTCAATTT +
Preference number: 2 (lower is better)
Translates to: FAACLLTRPLRFLHGSRSKREES*VLLRQF
Trigger: AAATTGACGCAGTAAAACGCAGGACTCTTCCCGCTT...CGATCGCGATCCGTGGAGAAATCTCAAAGGTCTGGTAAGAAGGCAAGCCGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR CAA 90 bp TCATCAATTTTACGCCTATCTCGACTCCTACTGCGACTGGCACGATaGGTTCGTCTATCCCTTGAGCGACTTCTACTTCTACGTCTCTCT +
Preference number: 2 (lower is better)
Translates to: SSILRLSRLLLRLAR*VRLSLERLLLLRLS
Trigger: AGAGAGACGTAGAAGTAGAAGTCGCTCAAGGGATAGACGAACCAATCGTGCCAGTCGCAGTAGGAGTCGAGATAGGCGTAAAATTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR CAA 90 bp TCGGGACTTAGACTTGTGTTTGCGGCTTGCCTTCTTACCAGACCTTaGAGATTTCTCCACGGATCGCGATCGACTATGTTTAGGCTTCTT +
Preference number: 2 (lower is better)
Translates to: SGLRLVFAACLLTRP*RFLHGSRSTMFRLL
Trigger: AAGAAGCCTAAACATAGTCGATCGCGATCCGTGGAGAAATCTCAAAGGTCTGGTAAGAAGGCAAGCCGCAAACACAAGTCTAAGTCCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR GCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGAGTGAGGGAAGCCAGTaGACTGGACTGTGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRSEGSQ*TGLCQL
Trigger: CAGCTGGCACAGTCCAGTGCACTGGCTTCCCTCACT...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTTGAGGAACTGGGGATaGACTTCTGGTGACTTTCCC +
Preference number: 2 (lower is better)
Translates to: ILVSPTQPQCASIMRQALLRNWG*TSGDFP
Trigger: GGGAAAGTCACCAGAAGTCCATCCCCAGTTCCTCAA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR CAA 90 bp AGCCTCACCTTTATGCTTATGACTGTTCCCACTAAGATTTCCACGTaGATCATCAATTTTACGCCTATCTCGACTCCTACTGCGACTGGC +
Preference number: 2 (lower is better)
Translates to: SLTFMLMTVPTKIST*IINFTPISTPTATG
Trigger: GCCAGTCGCAGTAGGAGTCGAGATAGGCGTAAAATTGATGATCAACGTGGAAATCTTAGTGGGAACAGTCATAAGCATAAAGGTGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR CAA 90 bp ACGGATCGCGATCGACTATGTTTAGGCTTCTTAGCCTTCTTTTCTTaGCTACTTCCTGGAGACTCAGAACTGCTCCTTCCACTAGAATCA +
Preference number: 2 (lower is better)
Translates to: TDRDRLCLGFLAFFS*LLPGDSELLLPLES
Trigger: TGATTCTAGTGGAAGGAGCAGTTCTGAGTCTCCAGGAAGTAGCAAAGAAAAGAAGGCTAAGAAGCCTAAACATAGTCGATCGCGATCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR GCA 90 bp GCTATTGCTACTGGAACTACCACTACTAGAACTTCCCGACCTACTCCTTCCTTGGACTTTCCCACTACTTaGAGCCTCAACATTTTCAGT +
Preference number: 2 (lower is better)
Translates to: AIATGTTTTRTSRPTPSLDFPTT*SLNIFS
Trigger: ACTGAAAATGTTGAGGCTGCAAGTAGTGGGAAAGTC...CAAGGAAGGAGTAGGTCGGGAAGTTCTAGTAGTGGTAGTTCCAGTAGCAATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR GCA 90 bp ATCTTATGGGACCACTGTTGTACATGTGGCCCGTCATTGACTGAAACGTCGTTATACACAGCCACAATGTaGCTCTATAATGAGACAAGC +
Preference number: 2 (lower is better)
Translates to: ILWDHCCTCGPSLTETSLYTATM*LYNETS
Trigger: GCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTA...TAACGACGTTTCAGTCAATGACGGGCCACATGTACAACAGTGGTCCCATAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681615.1
3UTR-3UTR GCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAACAGTGCACTGGACTGTaGCAGCTGTTTTGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQQCTGL*QLFCRS
Trigger: GCTCCTGCAAAACAGCTGGCACAGTCCAGTGCACTG...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR TCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACTCACTGTGCTCTTCTTaGGGAACTGGGGATGGACTT +
Preference number: 2 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYSLCSS*GTGDGL
Trigger: AAGTCCATCCCCAGTTCCTCAAGAAGAGCACAGTGA...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR CAA 90 bp TATGAAGAGCTAGAGACAGTACTACTAGTACTACTAGTTCTGCTATaGCTACTGGAACTACCACTACTAGAACTTCCCGACCTACTCCTT +
Preference number: 2 (lower is better)
Translates to: YEELETVLLVLLVLL*LLELPLLELPDLLL
Trigger: AAGGAGTAGGTCGGGAAGTTCTAGTAGTGGTAGTTCCAGTAGCAATAGCAGAACTAGTAGTACTAGTAGTACTGTCTCTAGCTCTTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR TCA 90 bp GCGAGAATAGCTTCTACTCCTGCTACGTCTAGCTTTGATTGTTGGAGATCTACTGTGCACTGGCTTGATTaGTTCCAGCAATTTCATTTT +
Preference number: 2 (lower is better)
Translates to: ARIASTPATSSFDCWRSTVHWLD*FQQFHF
Trigger: AAAATGAAATTGCTGGAATCAATCAAGCCAGTGCAC...AGTAGATCTCCAACAATCAAAGCTAGACGTAGCAGGAGTAGAAGCTATTCTCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR TCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCGGGATGGACTTCTGGTaGCTTTCCCACTACTTGCAG +
Preference number: 2 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTGMDFW*LSHYLQ
Trigger: CTGCAAGTAGTGGGAAAGTCACCAGAAGTCCATCCC...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR CCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTGACTCCTACTGCGACTaGCACGATTGGTTCGTCTAT +
Preference number: 2 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCDSYCD*HDWFVY
Trigger: ATAGACGAACCAATCGTGCCAGTCGCAGTAGGAGTC...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR TCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTTTCTTTGGGGGAGGTaGGAGAAGGTACCTTTAAAA +
Preference number: 2 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRFLWGR*EKVPLK
Trigger: TTTTAAAGGTACCTTCTCTCACCTCCCCCAAAGAAA...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR-3UTR TCA 90 bp TCTACTCCTGCTACGTCTAGCTTTGATTGTTGGAGATCTACTCCTACTGTGTCTAAATTTCTTCATCTGTaGCATCCAGCAGAATTTCTG +
Preference number: 2 (lower is better)
Translates to: STPATSSFDCWRSTPTVSKFLHL*HPAEFL
Trigger: CAGAAATTCTGCTGGATGTCACAGATGAAGAAATTT...AGACACAGTAGGAGTAGATCTCCAACAATCAAAGCTAGACGTAGCAGGAGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR GCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGTACACAGCCACAATGTaGCTCTATAATGAGACAAGC +
Preference number: 2 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMYTATM*LYNETS
Trigger: GCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTA...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR-3UTR GCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAACTGTGCCAGCTGTTTTaGAGGAGCTTTCGTTGCTTT +
Preference number: 2 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQLCQLF*RSFRCF
Trigger: AAAGCAACGAAAGCTCCTGCAAAACAGCTGGCACAG...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR GCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGAAAGCTTCCTGTTTTTaGCGGATTCGATGCCGTAAT +
Preference number: 2 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRKASCF*RIRCRN
Trigger: ATTACGGCATCGAATCCGGCAAAAACAGGAAGCTTT...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR CCA 90 bp ATCTTATGGGACCACTGTTGTACATGTGGCCCGTCATTGACTGAAACGTCGTTAAACTTGGAGCAGCATTaGAAAAAGTACACCTATTTA +
Preference number: 2 (lower is better)
Translates to: ILWDHCCTCGPSLTETSLNLEQH*KKYTYL
Trigger: TAAATAGGTGTACTTTTTCCAATGCTGCTCCAAGTT...TAACGACGTTTCAGTCAATGACGGGCCACATGTACAACAGTGGTCCCATAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681615.1
3UTR-3UTR TCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCAACTGGTGCACTGGCTTaGTTGATTCCAGCAATTTCA +
Preference number: 2 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGATGALA*LIPAIS
Trigger: TGAAATTGCTGGAATCAATCAAGCCAGTGCACCAGT...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR-3UTR GCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATGAGCTTTCGTTGCTTTaGGGTGTGCATCTTTGGCTA +
Preference number: 2 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYELSLL*GVHLWL
Trigger: TAGCCAAAGATGCACACCGCAAAGCAACGAAAGCTC...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR CCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCAATTCCCTTAATGGTGTaGTTTACCCCCACTCCACAA +
Preference number: 2 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGAIPLMV*FTPTPQ
Trigger: TTGTGGAGTGGGGGTAAACCACACCATTAAGGGAAT...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
3UTR-3UTR CCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTATTCCCTTAATGGTGTaGTTTACCCCCACTCCACAA +
Preference number: 2 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCIPLMV*FTPTPQ
Trigger: TTGTGGAGTGGGGGTAAACCACACCATTAAGGGAAT...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
3UTR-3UTR CCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAATTCTTTGCTACTTCCTaGAGACTCAGAACTGCTCCT +
Preference number: 2 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQFFATS*RLRTAP
Trigger: AGGAGCAGTTCTGAGTCTCCAGGAAGTAGCAAAGAA...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR TCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCAATGTTGAGGAAACACTaGTCTTGGCAAAAATCTGGC +
Preference number: 2 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGAMLRKH*SWQKSG
Trigger: GCCAGATTTTTGCCAAGATCAGTGTTTCCTCAACAT...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR-3UTR TCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAAATGTTGAGGAAACACTaGTCTTGGCAAAAATCTGGC +
Preference number: 2 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQMLRKH*SWQKSG
Trigger: GCCAGATTTTTGCCAAGATCAGTGTTTCCTCAACAT...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR-3UTR GCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGACGTTGCTTTGCGGTGTaGATCTTTGGCTACGTAATA +
Preference number: 2 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGRCFAV*IFGYVI
Trigger: TATTACGTAGCCAAAGATGCACACCGCAAAGCAACG...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR TCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCTTTCTTTGGGGGAGGTaGGAGAAGGTACCTTTAAAA +
Preference number: 2 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTFLWGR*EKVPLK
Trigger: TTTTAAAGGTACCTTCTCTCACCTCCCCCAAAGAAA...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR-3UTR TCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCAGTGCACTGGCTTGATTaGTTCCAGCAATTTCATTTT +
Preference number: 2 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGAVHWLD*FQQFHF
Trigger: AAAATGAAATTGCTGGAATCAATCAAGCCAGTGCAC...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR-3UTR TCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTTTTCTATCTTCATGTTaGGGAAACACTGATCTTGGC +
Preference number: 2 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCFLSSC*GNTDLG
Trigger: GCCAAGATCAGTGTTTCCTCAACATGAAGATAGAAA...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR-3UTR GCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATTACACAGCCACAATGTaGCTCTATAATGAGACAAGC +
Preference number: 2 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYYTATM*LYNETS
Trigger: GCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTA...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR-3UTR CCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAATCTAGCTTTGATTGTTaGAGATCTACTCCTACTGTG +
Preference number: 2 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQSSFDC*RSTPTV
Trigger: CACAGTAGGAGTAGATCTCCAACAATCAAAGCTAGA...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR TCA 90 bp TCTCCTTCTATCTCTAATCTTTACCCTAGCCCTATTGCTCTCTATTTTAATTCTGTCAGCAACATCATTTaGTACTCTTTCTCCTCTTCA +
Preference number: 2 (lower is better)
Translates to: SPSISNLYPSPIALYFNSVSNII*YSFSSS
Trigger: TGAAGAGGAGAAAGAGTATCAAATGATGTTGCTGAC...AGAATTAAAATAGAGAGCAATAGGGCTAGGGTAAAGATTAGAGATAGAAGGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR GCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCAAAATTGACACAAACCTaGATAATACAGCATTCCTCC +
Preference number: 2 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGAKLTQT*IIQHSS
Trigger: GGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTT...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR-3UTR GCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAAAAATTGACACAAACCTaGATAATACAGCATTCCTCC +
Preference number: 2 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQKLTQT*IIQHSS
Trigger: GGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTT...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR-3UTR GCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCTTGTAAGTTATCAATaGCTTAAACTGTTAGACCAC +
Preference number: 2 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCLVSYQ*LKLLDH
Trigger: GTGGTCTAACAGTTTAAGGCATTGATAACTTACAAG...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR-3UTR CCA 90 bp TCTATCTCTAATCTTTACCCTAGCCCTATTGCTCTCTATTTTAATTCTGCGAGAAACTTGGAGCAGCATTaGAAAAAGTACACCTATTTA +
Preference number: 2 (lower is better)
Translates to: SISNLYPSPIALYFNSARNLEQH*KKYTYL
Trigger: TAAATAGGTGTACTTTTTCCAATGCTGCTCCAAGTT...TCTCGCAGAATTAAAATAGAGAGCAATAGGGCTAGGGTAAAGATTAGAGATAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR CCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAATCTGGCAAAAGTCCATaGGTACAATTTACAAACTTT +
Preference number: 2 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQSGKSP*VQFTNF
Trigger: AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGA...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR-3UTR CCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAAACTTGGAGCAGCATTaGAAAAAGTACACCTATTTA +
Preference number: 2 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKNLEQH*KKYTYL
Trigger: TAAATAGGTGTACTTTTTCCAATGCTGCTCCAAGTT...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR-3UTR CCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATAACTTGGAGCAGCATTaGAAAAAGTACACCTATTTA +
Preference number: 2 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYNLEQH*KKYTYL
Trigger: TAAATAGGTGTACTTTTTCCAATGCTGCTCCAAGTT...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR-3UTR CCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAAACTTGGAGCAGCATTaGAAAAAGTACACCTATTTA +
Preference number: 2 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGNLEQH*KKYTYL
Trigger: TAAATAGGTGTACTTTTTCCAATGCTGCTCCAAGTT...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR-3UTR CCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCTCTGGCAAAAGTCCATaGGTACAATTTACAAACTTT +
Preference number: 2 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTSGKSP*VQFTNF
Trigger: AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGA...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR-3UTR CCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATTCTGGCAAAAGTCCATaGGTACAATTTACAAACTTT +
Preference number: 2 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYSGKSP*VQFTNF
Trigger: AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGA...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR GCA 72 bp ACCACCCAGTCCACCGAGTCCAGTGAGGGAAGCCAGTaGACTGGACTGTGCCAGCTGTTTTGCAGGAGCTTT +
Preference number: 3 (lower is better)
Translates to: TTQSTESSEGSQ*TGLCQLFCRSF
Trigger: AAAGCTCCTGCAAAACAGCTGGCACAGTCCAGTGCACTGGCTTCCCTCACTGGACTCGGTGGACTGGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR TCA 72 bp CCTACTGCGACTGGCACGATTGGTTCGTCTATCCCTTaGGCGACTTCTACTTCTACGTCTCTCTCGGGAAGG +
Preference number: 3 (lower is better)
Translates to: PTATGTIGSSIP*ATSTSTSLSGR
Trigger: CCTTCCCGAGAGAGACGTAGAAGTAGAAGTCGCTCAAGGGATAGACGAACCAATCGTGCCAGTCGCAGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR CCA 72 bp CTCAGGGTCACTGTGCTCTTCTTGAGGAACTGGGGATaGACTTCTGGTGACTTTCCCACTACTTGCAGCCTC +
Preference number: 3 (lower is better)
Translates to: LRVTVLFLRNWG*TSGDFPTTCSL
Trigger: GAGGCTGCAAGTAGTGGGAAAGTCACCAGAAGTCCATCCCCAGTTCCTCAAGAAGAGCACAGTGACCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR CAA 90 bp TTTGCGGCTTGCCTTCTTACCAGACCTTTGAGATTTCTCCACGGATCGCGATCGCTGCGACTGGCACGATaGGTTCGTCTATCCCTTGAG +
Preference number: 3 (lower is better)
Translates to: FAACLLTRPLRFLHGSRSLRLAR*VRLSLE
Trigger: CTCAAGGGATAGACGAACCAATCGTGCCAGTCGCAG...CGATCGCGATCCGTGGAGAAATCTCAAAGGTCTGGTAAGAAGGCAAGCCGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR GCA 72 bp TTTCAAGACCTTCGCGAATCCAAGCGGGAAGAGTCCTaGGTTTTACTGCGTCAATTTGTGGAGGCTCCTGCT +
Preference number: 3 (lower is better)
Translates to: FQDLRESKREES*VLLRQFVEAPA
Trigger: AGCAGGAGCCTCCACAAATTGACGCAGTAAAACGCAGGACTCTTCCCGCTTGGATTCGCGAAGGTCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR CCA 72 bp AGTCATCTCAGGGTCACTGTGCTCTTCTTGAGGAACTaGGGATGGACTTCTGGTGACTTTCCCACTACTTGC +
Preference number: 3 (lower is better)
Translates to: SHLRVTVLFLRN*GWTSGDFPTTC
Trigger: GCAAGTAGTGGGAAAGTCACCAGAAGTCCATCCCCAGTTCCTCAAGAAGAGCACAGTGACCCTGAGATGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR CCA 72 bp TACGCCTATCTCGACTCCTACTGCGACTGGCACGATTaGTTCGTCTATCCCTTGAGCGACTTCTACTTCTAC +
Preference number: 3 (lower is better)
Translates to: YAYLDSYCDWHD*FVYPLSDFYFY
Trigger: GTAGAAGTAGAAGTCGCTCAAGGGATAGACGAACCAATCGTGCCAGTCGCAGTAGGAGTCGAGATAGGCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR CCA 72 bp CATCAATTTTACGCCTATCTCGACTCCTACTGCGACTaGCACGATTGGTTCGTCTATCCCTTGAGCGACTTC +
Preference number: 3 (lower is better)
Translates to: HQFYAYLDSYCD*HDWFVYPLSDF
Trigger: GAAGTCGCTCAAGGGATAGACGAACCAATCGTGCCAGTCGCAGTAGGAGTCGAGATAGGCGTAAAATTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR TCA 72 bp TGTGCTCTTCTTGAGGAACTGGGGATGGACTTCTGGTaGCTTTCCCACTACTTGCAGCCTCAACATTTTCAG +
Preference number: 3 (lower is better)
Translates to: CALLEELGMDFW*LSHYLQPQHFQ
Trigger: CTGAAAATGTTGAGGCTGCAAGTAGTGGGAAAGTCACCAGAAGTCCATCCCCAGTTCCTCAAGAAGAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR GCA 72 bp GTTGATCATCAATTTTACGCCTATCTCGACTCCTACTaGGACTGGCACGATTGGTTCGTCTATCCCTTGAGC +
Preference number: 3 (lower is better)
Translates to: VDHQFYAYLDSY*DWHDWFVYPLS
Trigger: GCTCAAGGGATAGACGAACCAATCGTGCCAGTCGCAGTAGGAGTCGAGATAGGCGTAAAATTGATGATCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR TCA 72 bp GACTTGTGTTTGCGGCTTGCCTTCTTACCAGACCTTTaGGATTTCTCCACGGATCGCGATCGACTATGTTTA +
Preference number: 3 (lower is better)
Translates to: DLCLRLAFLPDL*DFSTDRDRLCL
Trigger: TAAACATAGTCGATCGCGATCCGTGGAGAAATCTCAAAGGTCTGGTAAGAAGGCAAGCCGCAAACACAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR TCA 72 bp ATGGGACCACTGTTGTACATGTGGCCCGTCATTGACTaGAACGTCGTTATGTGGTGTATGTCTGTACTCAGT +
Preference number: 3 (lower is better)
Translates to: MGPLLYMWPVID*NVVMWCMSVLS
Trigger: ACTGAGTACAGACATACACCACATAACGACGTTTCAGTCAATGACGGGCCACATGTACAACAGTGGTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681615.1
3UTR TCA 72 bp TCTTATGGGACCACTGTTGTACATGTGGCCCGTCATTaGCTGAAACGTCGTTATGTGGTGTATGTCTGTACT +
Preference number: 3 (lower is better)
Translates to: SYGTTVVHVARH*LKRRYVVYVCT
Trigger: AGTACAGACATACACCACATAACGACGTTTCAGTCAATGACGGGCCACATGTACAACAGTGGTCCCATAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681615.1
3UTR-3UTR CAA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTTGCAGGAGCTTTCGTaGCTTTGCGGTGTGCATCTT +
Preference number: 3 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRLQELS*LCGVHL
Trigger: AAGATGCACACCGCAAAGCAACGAAAGCTCCTGCAA...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR TCA 72 bp TCTTCTTCTTCCTCATCACTATCAAATTTACTTCTCTaGGGTAAACGAGGGCCATCCCCTCCTTCAGCATCT +
Preference number: 3 (lower is better)
Translates to: SSSSSSLSNLLL*GKRGPSPPSAS
Trigger: AGATGCTGAAGGAGGGGATGGCCCTCGTTTACCTCAGAGAAGTAAATTTGATAGTGATGAGGAAGAAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR GCA 72 bp CAGCTGTTTTGCAGGAGCTTTCGTTGCTTTGCGGTGTaGATCTTTGGCTACGTAATAAATTTCTTCATCTGT +
Preference number: 3 (lower is better)
Translates to: QLFCRSFRCFAV*IFGYVINFFIC
Trigger: ACAGATGAAGAAATTTATTACGTAGCCAAAGATGCACACCGCAAAGCAACGAAAGCTCCTGCAAAACAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTAACATCATGGCATTCTaGCCACATCATTCCTCAGCG +
Preference number: 3 (lower is better)
Translates to: QPQCASIMRQALKTHGIFNIMAF*PHHSSA
Trigger: CGCTGAGGAATGATGTGGCAAGAATGCCATGATGTT...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
3UTR-3UTR CAA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATGTCACTGTGCTCTTCTaGAGGAACTGGGGATGGACT +
Preference number: 3 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYVTVLF*RNWGWT
Trigger: AGTCCATCCCCAGTTCCTCAAGAAGAGCACAGTGAC...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR CAA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAGGAGCTTTCGTTGCTTaGCGGTGTGCATCTTTGGCT +
Preference number: 3 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKGAFVA*RCASLA
Trigger: AGCCAAAGATGCACACCGCAAAGCAACGAAAGCTCC...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR GCA 72 bp TTTCTCCAAAAAGCTTCCTGTTTTTGCCGGATTCGATaGCGTAATTCTTCATCATCAGTGTCAGATGACTCA +
Preference number: 3 (lower is better)
Translates to: FLQKASCFCRIR*RNSSSSVSDDS
Trigger: TGAGTCATCTGACACTGATGATGAAGAATTACGGCATCGAATCCGGCAAAAACAGGAAGCTTTTTGGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR CAA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAAAACATCATGGCATTCTaGCCACATCATTCCTCAGCG +
Preference number: 3 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQNIMAF*PHHSSA
Trigger: CGCTGAGGAATGATGTGGCAAGAATGCCATGATGTT...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
3UTR-3UTR CAA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCAAACATCATGGCATTCTaGCCACATCATTCCTCAGCG +
Preference number: 3 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGANIMAF*PHHSSA
Trigger: CGCTGAGGAATGATGTGGCAAGAATGCCATGATGTT...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
3UTR-3UTR CAA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATACTGTGCCAGCTGTTTaGCAGGAGCTTTCGTTGCTT +
Preference number: 3 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYTVPAV*QELSLL
Trigger: AAGCAACGAAAGCTCCTGCAAAACAGCTGGCACAGT...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR CAA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAAACATGTGGCCCGTCATaGACTGAAACGTCGTTATGT +
Preference number: 3 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQTCGPS*TETSLC
Trigger: ACATAACGACGTTTCAGTCAATGACGGGCCACATGT...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681615.1
3UTR-3UTR CAA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAAACATCATGGCATTCTaGCCACATCATTCCTCAGCG +
Preference number: 3 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKNIMAF*PHHSSA
Trigger: CGCTGAGGAATGATGTGGCAAGAATGCCATGATGTT...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
3UTR-3UTR CAA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTAACATCATGGCATTCTaGCCACATCATTCCTCAGCG +
Preference number: 3 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFNIMAF*PHHSSA
Trigger: CGCTGAGGAATGATGTGGCAAGAATGCCATGATGTT...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
3UTR CCA 72 bp ATAGCTTCTACTCCTGCTACGTCTAGCTTTGATTGTTaGAGATCTACTCCTACTGTGTCTCTTTTTCCTTTT +
Preference number: 3 (lower is better)
Translates to: IASTPATSSFDC*RSTPTVSLFPF
Trigger: AAAAGGAAAAAGAGACACAGTAGGAGTAGATCTCCAACAATCAAAGCTAGACGTAGCAGGAGTAGAAGCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR CAA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTGAGGAAACACTGATCTaGGCAAAAATCTGGCATGAT +
Preference number: 3 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCEETLI*AKIWHD
Trigger: ATCATGCCAGATTTTTGCCAAGATCAGTGTTTCCTC...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR-3UTR CAA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCTACTAGTTCTGCTATaGCTACTGGAACTACCACTA +
Preference number: 3 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCLLVLL*LLELPL
Trigger: TAGTGGTAGTTCCAGTAGCAATAGCAGAACTAGTAG...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR CAA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTTTCATACCCTTAAAGTaGGAATCTGGCAAAAGTCCA +
Preference number: 3 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCFIPLK*ESGKSP
Trigger: TGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAA...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR-3UTR CAA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAATTCATACCCTTAAAGTaGGAATCTGGCAAAAGTCCA +
Preference number: 3 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQFIPLK*ESGKSP
Trigger: TGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAA...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR-3UTR CAA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAAGCTCTAGTTCATAACTaGCCCAAAAATGTGCATATC +
Preference number: 3 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQALVHN*PKNVHI
Trigger: GATATGCACATTTTTGGGCAAGTTATGAACTAGAGC...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
3UTR-3UTR CAA 90 bp TCTCCTTCTATCTCTAATCTTTACCCTAGCCCTATTGCTCTCTATTTTAATTCTTTCATACCCTTAAAGTaGGAATCTGGCAAAAGTCCA +
Preference number: 3 (lower is better)
Translates to: SPSISNLYPSPIALYFNSFIPLK*ESGKSP
Trigger: TGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAA...AGAATTAAAATAGAGAGCAATAGGGCTAGGGTAAAGATTAGAGATAGAAGGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR-3UTR CAA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAAAATCCAGACCAAGGATaGTCTCAAAAATTTGATCTG +
Preference number: 3 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQNPDQG*SQKFDL
Trigger: CAGATCAAATTTTTGAGACAATCCTTGGTCTGGATT...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
3UTR-3UTR CAA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCTGTCAGCAACATCATTaGATACTCTTTCTCCTCTTC +
Preference number: 3 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTCQQHH*ILFLLF
Trigger: GAAGAGGAGAAAGAGTATCAAATGATGTTGCTGACA...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR GCA 72 bp TGCTTTGAGAGCCCCATTCTACTTGTAAGTTATCAATaGCTTAAACTGTTAGACCACTCACTAATCATAATT +
Preference number: 3 (lower is better)
Translates to: CFESPILLVSYQ*LKLLDHSLIII
Trigger: AATTATGATTAGTGAGTGGTCTAACAGTTTAAGGCATTGATAACTTACAAGTAGAATGGGGCTCTCAAAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATCTTATGGGACCACTGTTGTACATGTGGCCCGTCATTGACTGAAACGTCGTTAGTCCACCGAGTCCAGTaGGGGAAGCCAGTGCACTGG +
Preference number: 4 (lower is better)
Translates to: ILWDHCCTCGPSLTETSLVHRVQ*GKPVHW
Trigger: CCAGTGCACTGGCTTCCCTCACTGGACTCGGTGGAC...TAACGACGTTTCAGTCAATGACGGGCCACATGTACAACAGTGGTCCCATAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681615.1
CDS-3UTR GCA 90 bp GGAACTGGGGATGGACTTCTGGTGACTTTCCCACTACTTGCAGCCTCAACATTTAGTGAGGGAAGCCAGTaGACTGGACTGTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GTGDGLLVTFPLLAASTFSEGSQ*TGLCQL
Trigger: CAGCTGGCACAGTCCAGTGCACTGGCTTCCCTCACT...AAATGTTGAGGCTGCAAGTAGTGGGAAAGTCACCAGAAGTCCATCCCCAGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR CAA 72 bp CTCCTCTTCAGTCATCTCAGGGTCACTGTGCTCTTCTaGAGGAACTGGGGATGGACTTCTGGTGACTTTCCC +
Preference number: 4 (lower is better)
Translates to: LLFSHLRVTVLF*RNWGWTSGDFP
Trigger: GGGAAAGTCACCAGAAGTCCATCCCCAGTTCCTCAAGAAGAGCACAGTGACCCTGAGATGACTGAAGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR CAA 72 bp TCCTACTGCGACTGGCACGATTGGTTCGTCTATCCCTaGAGCGACTTCTACTTCTACGTCTCTCTCGGGAAG +
Preference number: 4 (lower is better)
Translates to: SYCDWHDWFVYP*SDFYFYVSLGK
Trigger: CTTCCCGAGAGAGACGTAGAAGTAGAAGTCGCTCAAGGGATAGACGAACCAATCGTGCCAGTCGCAGTAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CCA 90 bp TTTGCGGCTTGCCTTCTTACCAGACCTTTGAGATTTCTCCACGGATCGCGATCGTGGGCAATCCAAGCTTaGGCCAATGCAGCCCAATCA +
Preference number: 4 (lower is better)
Translates to: FAACLLTRPLRFLHGSRSWAIQA*ANAAQS
Trigger: TGATTGGGCTGCATTGGCCCAAGCTTGGATTGCCCA...CGATCGCGATCCGTGGAGAAATCTCAAAGGTCTGGTAAGAAGGCAAGCCGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR TCA 90 bp TTTGCGGCTTGCCTTCTTACCAGACCTTTGAGATTTCTCCACGGATCGCGATCGCTGTTGGTGCTGGAATaGCTGCATCCATTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: FAACLLTRPLRFLHGSRSLLVLE*LHPLLL
Trigger: CAGCAACAATGGATGCAGTCATTCCAGCACCAACAG...CGATCGCGATCCGTGGAGAAATCTCAAAGGTCTGGTAAGAAGGCAAGCCGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTCGATTCTGGGGAGGTaGTGGAGGTCCTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALSILGR*WRSWRS
Trigger: GGACCTCCAGGACCTCCAGCACCTCCCCAGAATCGA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GGAACTGGGGATGGACTTCTGGTGACTTTCCCACTACTTGCAGCCTCAACATTTGCAGCCCAATCAATCTaGCTTGGATCCTGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GTGDGLLVTFPLLAASTFAAQSI*LGSCWC
Trigger: GCACCAACAGGATCCAAGCCAGATTGATTGGGCTGC...AAATGTTGAGGCTGCAAGTAGTGGGAAAGTCACCAGAAGTCCATCCCCAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR TCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGTCCACCGAGTCCAGTaGGGGAAGCCAGTGCACTGG +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMVHRVQ*GKPVHW
Trigger: CCAGTGCACTGGCTTCCCTCACTGGACTCGGTGGAC...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAGTGAGGGAAGCCAGTaGACTGGACTGTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALSEGSQ*TGLCQL
Trigger: CAGCTGGCACAGTCCAGTGCACTGGCTTCCCTCACT...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTGGGCCTGGTGTTGGTaGCATCCATGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALWAWCW*HPWLIW
Trigger: CCAGATCAGCCATGGATGCCACCAACACCAGGCCCA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TCTACTCCTGCTACGTCTAGCTTTGATTGTTGGAGATCTACTCCTACTGTGTCTTGGGCCTGGTGTTGGTaGCATCCATGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: STPATSSFDCWRSTPTVSWAWCW*HPWLIW
Trigger: CCAGATCAGCCATGGATGCCACCAACACCAGGCCCA...AGACACAGTAGGAGTAGATCTCCAACAATCAAAGCTAGACGTAGCAGGAGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR CAA 72 bp TTACGCCTATCTCGACTCCTACTGCGACTGGCACGATaGGTTCGTCTATCCCTTGAGCGACTTCTACTTCTA +
Preference number: 4 (lower is better)
Translates to: LRLSRLLLRLAR*VRLSLERLLLL
Trigger: TAGAAGTAGAAGTCGCTCAAGGGATAGACGAACCAATCGTGCCAGTCGCAGTAGGAGTCGAGATAGGCGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR TCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTGTCCACCGAGTCCAGTaGGGGAAGCCAGTGCACTGG +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFVHRVQ*GKPVHW
Trigger: CCAGTGCACTGGCTTCCCTCACTGGACTCGGTGGAC...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ACTAGTACTACTAGTTCTGCTATTGCTACTGGAACTACCACTACTAGAACTTCCTCGATTCTGGGGAGGTaGTGGAGGTCCTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: TSTTSSAIATGTTTTRTSSILGR*WRSWRS
Trigger: GGACCTCCAGGACCTCCAGCACCTCCCCAGAATCGA...GGAAGTTCTAGTAGTGGTAGTTCCAGTAGCAATAGCAGAACTAGTAGTACTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCAGTGCACTGGACTGTaGCAGCTGTTTTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALQCTGL*QLFCRS
Trigger: GCTCCTGCAAAACAGCTGGCACAGTCCAGTGCACTG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TCTGCTATTGCTACTGGAACTACCACTACTAGAACTTCCCGACCTACTCCTTCCAGGAACAATGTCCATTaGGCCTGGTGTTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: SAIATGTTTTRTSRPTPSRNNVH*AWCWWH
Trigger: ATGCCACCAACACCAGGCCCAATGGACATTGTTCCT...GGAAGGAGTAGGTCGGGAAGTTCTAGTAGTGGTAGTTCCAGTAGCAATAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTGGGAAGCCAGTGCACTaGACTGTGCCAGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALGKPVH*TVPAVL
Trigger: CAAAACAGCTGGCACAGTCCAGTGCACTGGCTTCCC...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGGTGTGGGGGTTGCTaGTGCATTCCCCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMGCGGC*CIPHSG
Trigger: ACCAGAATGGGGAATGCATCAGCAACCCCCACACCC...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGGGGTGTGGGGGTTGCTaGTGCATTCCCCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRGCGGC*CIPHSG
Trigger: ACCAGAATGGGGAATGCATCAGCAACCCCCACACCC...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTGGGATGGACTTCTGGTaGCTTTCCCACTACTTGCAG +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALGMDFW*LSHYLQ
Trigger: CTGCAAGTAGTGGGAAAGTCACCAGAAGTCCATCCC...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCAGTCCACCGAGTCCAGTaGGGGAAGCCAGTGCACTGG +
Preference number: 4 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGAVHRVQ*GKPVHW
Trigger: CCAGTGCACTGGCTTCCCTCACTGGACTCGGTGGAC...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTGTCCACCGAGTCCAGTaGGGGAAGCCAGTGCACTGG +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCVHRVQ*GKPVHW
Trigger: CCAGTGCACTGGCTTCCCTCACTGGACTCGGTGGAC...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GCTATTGCTACTGGAACTACCACTACTAGAACTTCCCGACCTACTCCTTCCTTGCTCCAACGCTTTCGATaGTTCTACTTCTTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: AIATGTTTTRTSRPTPSLLQRFR*FYFFGN
Trigger: GTTCCCGAAGAAGTAGAAGCATCGAAAGCGTTGGAG...CAAGGAAGGAGTAGGTCGGGAAGTTCTAGTAGTGGTAGTTCCAGTAGCAATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTGACTGCATCCATTGTTaGTGGTTCAAGGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALDCIHC*WFKGHC
Trigger: GCAGTGGCCCTTGAACCAGCAACAATGGATGCAGTC...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GCGAGAATAGCTTCTACTCCTGCTACGTCTAGCTTTGATTGTTGGAGATCTACTGACTGCATCCATTGTTaGTGGTTCAAGGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: ARIASTPATSSFDCWRSTDCIHC*WFKGHC
Trigger: GCAGTGGCCCTTGAACCAGCAACAATGGATGCAGTC...AGTAGATCTCCAACAATCAAAGCTAGACGTAGCAGGAGTAGAAGCTATTCTCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCCAAGCTTGGGCCAATaGAGCCCAATCAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALPSLGQ*SPINLA
Trigger: AGCCAGATTGATTGGGCTGCATTGGCCCAAGCTTGG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TCTACTCCTGCTACGTCTAGCTTTGATTGTTGGAGATCTACTCCTACTGTGTCTGTTCACTGGCCCCACTaGAAAATTATCGGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: STPATSSFDCWRSTPTVSVHWPH*KIIGWS
Trigger: GGACCACCCGATAATTTTGCAGTGGGGCCAGTGAAC...AGACACAGTAGGAGTAGATCTCCAACAATCAAAGCTAGACGTAGCAGGAGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR GCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTCGATTCTGGGGAGGTaGTGGAGGTCCTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFSILGR*WRSWRS
Trigger: GGACCTCCAGGACCTCCAGCACCTCCCCAGAATCGA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TTTGCGGCTTGCCTTCTTACCAGACCTTTGAGATTTCTCCACGGATCGCGATCGGACTTTCCCACTACTTaGAGCCTCAACATTTTCAGT +
Preference number: 4 (lower is better)
Translates to: FAACLLTRPLRFLHGSRSDFPTT*SLNIFS
Trigger: ACTGAAAATGTTGAGGCTGCAAGTAGTGGGAAAGTC...CGATCGCGATCCGTGGAGAAATCTCAAAGGTCTGGTAAGAAGGCAAGCCGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR GCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGAGTGAGGGAAGCCAGTaGACTGGACTGTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMSEGSQ*TGLCQL
Trigger: CAGCTGGCACAGTCCAGTGCACTGGCTTCCCTCACT...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTGCATCCATTGTTGCTaGTTCAAGGGCCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALCIHCC*FKGHCC
Trigger: GCAGCAGTGGCCCTTGAACCAGCAACAATGGATGCA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCCTGAAGCTTCTCTTTaGGCAATCCAAGCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALPEASL*AIQAWA
Trigger: GGCCCAAGCTTGGATTGCCCAAAGAGAAGCTTCAGG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAATGTCCATTGGGCCTaGTGTTGGTGGCATCCATGG +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALNVHWA*CWWHPW
Trigger: CCATGGATGCCACCAACACCAGGCCCAATGGACATT...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAGGTCCTGGAGGTCCTaGTTGCCAATAAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALRSWRS*LPIRRM
Trigger: CATCCTCCTTATTGGCAACCAGGACCTCCAGGACCT...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCTTTCTCTTCGATTCTaGGGAGGTGCTGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALLSLRF*GGAGGP
Trigger: AGGACCTCCAGCACCTCCCCAGAATCGAAGAGAAAG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTGCGACTGGCACGATTaGTTCGTCTATCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALCDWHD*FVYPLS
Trigger: GCTCAAGGGATAGACGAACCAATCGTGCCAGTCGCA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTGGGAACAAGACAAGATaGCGCCCGATTTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALGNKTR*RPICLT
Trigger: GGTGAGACAAATCGGGCGCCATCTTGTCTTGTTCCC...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438806.5
ENST00000681615.1
CDS-3UTR TCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCTGTTGGTGCTGGAATaGCTGCATCCATTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALLLVLE*LHPLLL
Trigger: CAGCAACAATGGATGCAGTCATTCCAGCACCAACAG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp TCTGCTATTGCTACTGGAACTACCACTACTAGAACTTCCCGACCTACTCCTTCCCCTTGGAAATTCCCATaGTTGTTTGGACCAGATTCC +
Preference number: 4 (lower is better)
Translates to: SAIATGTTTTRTSRPTPSPWKFP*LFGPDS
Trigger: GGAATCTGGTCCAAACAATCATGGGAATTTCCAAGG...GGAAGGAGTAGGTCGGGAAGTTCTAGTAGTGGTAGTTCCAGTAGCAATAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR TCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTGGGTGTGGGGGTTGCTaGTGCATTCCCCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFGCGGC*CIPHSG
Trigger: ACCAGAATGGGGAATGCATCAGCAACCCCCACACCC...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAACGCTGACGATCCCTaGATGATGATGGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALNADDP*MMMAFL
Trigger: GAGAAAGGCCATCATCATTCAGGGATCGTCAGCGTT...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAGGAAGTGCAATAGGTaGACGCTGACGATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALRKCNR*TLTIPE
Trigger: TTCAGGGATCGTCAGCGTTCACCTATTGCACTTCCT...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTCACTGTGCTCTTCTTaGGGAACTGGGGATGGACTT +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALSLCSS*GTGDGL
Trigger: AAGTCCATCCCCAGTTCCTCAAGAAGAGCACAGTGA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAGTCCACCGAGTCCAGTaGGGGAAGCCAGTGCACTGG +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGVHRVQ*GKPVHW
Trigger: CCAGTGCACTGGCTTCCCTCACTGGACTCGGTGGAC...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTGGTTCGTCTATCCCTTaGGCGACTTCTACTTCTACG +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALGSSIP*ATSTST
Trigger: CGTAGAAGTAGAAGTCGCTCAAGGGATAGACGAACC...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTGGTTCAAGGGCCACTaGTGCCAAGGCTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFWFKGH*CQGCPP
Trigger: AGGAGGACAGCCTTGGCAGCAGTGGCCCTTGAACCA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTTCGATTCTGGGGAGGTaGTGGAGGTCCTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCSILGR*WRSWRS
Trigger: GGACCTCCAGGACCTCCAGCACCTCCCCAGAATCGA...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGCAGTGCACTGGACTGTaGCAGCTGTTTTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRQCTGL*QLFCRS
Trigger: GCTCCTGCAAAACAGCTGGCACAGTCCAGTGCACTG...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAGTGAGGGAAGCCAGTaGACTGGACTGTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYSEGSQ*TGLCQL
Trigger: CAGCTGGCACAGTCCAGTGCACTGGCTTCCCTCACT...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTAGTGAGGGAAGCCAGTaGACTGGACTGTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFSEGSQ*TGLCQL
Trigger: CAGCTGGCACAGTCCAGTGCACTGGCTTCCCTCACT...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTATCTCGACTCCTACTaGGACTGGCACGATTGGTTC +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALYLDSY*DWHDWF
Trigger: GAACCAATCGTGCCAGTCGCAGTAGGAGTCGAGATA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTGGCTTGGATCCTGTTaGTGCTGGAATGACTGCATC +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALWLGSC*CWNDCI
Trigger: GATGCAGTCATTCCAGCACCAACAGGATCCAAGCCA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACTGGGCCTGGTGTTGGTaGCATCCATGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYWAWCW*HPWLIW
Trigger: CCAGATCAGCCATGGATGCCACCAACACCAGGCCCA...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGCATTGGGCCTGGTGTTaGTGGCATCCATGGCTGATC +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMHWAWC*WHPWLI
Trigger: GATCAGCCATGGATGCCACCAACACCAGGCCCAATG...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGAGGTGCTGGAGGTCCTaGAGGTCCTGGTTGCCAATA +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMRCWRS*RSWLPI
Trigger: TATTGGCAACCAGGACCTCCAGGACCTCCAGCACCT...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGAGGTGCTGGAGGTCCTaGAGGTCCTGGTTGCCAATA +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRRCWRS*RSWLPI
Trigger: TATTGGCAACCAGGACCTCCAGGACCTCCAGCACCT...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTACTGCGTCAATTTGTaGAGGCTCCTGCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALYCVNL*RLLLHR
Trigger: CCTGTGAAGCAGGAGCCTCCACAAATTGACGCAGTA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GCGAGAATAGCTTCTACTCCTGCTACGTCTAGCTTTGATTGTTGGAGATCTACTTACTGCGTCAATTTGTaGAGGCTCCTGCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: ARIASTPATSSFDCWRSTYCVNL*RLLLHR
Trigger: CCTGTGAAGCAGGAGCCTCCACAAATTGACGCAGTA...AGTAGATCTCCAACAATCAAAGCTAGACGTAGCAGGAGTAGAAGCTATTCTCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCTCTTCTTGAGGAACTaGGGATGGACTTCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALLFLRN*GWTSGD
Trigger: GTCACCAGAAGTCCATCCCCAGTTCCTCAAGAAGAG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTGACTCCTACTGCGACTaGCACGATTGGTTCGTCTAT +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALDSYCD*HDWFVY
Trigger: ATAGACGAACCAATCGTGCCAGTCGCAGTAGGAGTC...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
3UTR CAA 72 bp AGACTTGTGTTTGCGGCTTGCCTTCTTACCAGACCTTaGAGATTTCTCCACGGATCGCGATCGACTATGTTT +
Preference number: 4 (lower is better)
Translates to: RLVFAACLLTRP*RFLHGSRSTMF
Trigger: AAACATAGTCGATCGCGATCCGTGGAGAAATCTCAAAGGTCTGGTAAGAAGGCAAGCCGCAAACACAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR TCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCATGCTTTGCTGTCCTaGAGCTTCTCTTTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALHALLS*SFSLGN
Trigger: ATTGCCCAAAGAGAAGCTTCAGGACAGCAAAGCATG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAAGGGTGTGGGGGTTGCTaGTGCATTCCCCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQGCGGC*CIPHSG
Trigger: ACCAGAATGGGGAATGCATCAGCAACCCCCACACCC...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTGGGTGTGGGGGTTGCTaGTGCATTCCCCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCGCGGC*CIPHSG
Trigger: ACCAGAATGGGGAATGCATCAGCAACCCCCACACCC...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTGCAATAGGTGAACGCTaGCGATCCCTGAATGATGAT +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALAIGER*RSLNDD
Trigger: ATCATCATTCAGGGATCGTCAGCGTTCACCTATTGC...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGGATGGACTTCTGGTaGCTTTCCCACTACTTGCAG +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMGMDFW*LSHYLQ
Trigger: CTGCAAGTAGTGGGAAAGTCACCAGAAGTCCATCCC...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCTCCAACGCTTTCGATaGTTCTACTTCTTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALLQRFR*FYFFGN
Trigger: GTTCCCGAAGAAGTAGAAGCATCGAAAGCGTTGGAG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTGGTGCTGGAATGACTaGATCCATTGTTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALWCWND*IHCCWF
Trigger: GAACCAGCAACAATGGATGCAGTCATTCCAGCACCA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCTTGGATCCTGTTGGTaGTGGAATGACTGCATCCAT +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALLGSCW*WNDCIH
Trigger: ATGGATGCAGTCATTCCAGCACCAACAGGATCCAAG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGCCAAGCTTGGGCCAATaGAGCCCAATCAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMPSLGQ*SPINLA
Trigger: AGCCAGATTGATTGGGCTGCATTGGCCCAAGCTTGG...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCACTGTCCTGACTGTTaGTGTCTTCAGAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALHCPDC*CLQKEE
Trigger: TTCCTCCTTCTGAAGACAGCAACAGTCAGGACAGTG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATTCGATTCTGGGGAGGTaGTGGAGGTCCTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYSILGR*WRSWRS
Trigger: GGACCTCCAGGACCTCCAGCACCTCCCCAGAATCGA...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCTCGATTCTGGGGAGGTaGTGGAGGTCCTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTSILGR*WRSWRS
Trigger: GGACCTCCAGGACCTCCAGCACCTCCCCAGAATCGA...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTTCGATTCTGGGGAGGTaGTGGAGGTCCTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFSILGR*WRSWRS
Trigger: GGACCTCCAGGACCTCCAGCACCTCCCCAGAATCGA...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATCTTATGGGACCACTGTTGTACATGTGGCCCGTCATTGACTGAAACGTCGTTAAAGCGGGAAGAGTCCTaGGTTTTACTGCGTCAATTT +
Preference number: 4 (lower is better)
Translates to: ILWDHCCTCGPSLTETSLKREES*VLLRQF
Trigger: AAATTGACGCAGTAAAACGCAGGACTCTTCCCGCTT...TAACGACGTTTCAGTCAATGACGGGCCACATGTACAACAGTGGTCCCATAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681615.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTGCAGGAGCTTTCGTTaGTTTGCGGTGTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALCRSFR*FAVCIF
Trigger: AAAGATGCACACCGCAAAGCAACGAAAGCTCCTGCA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GCGAGAATAGCTTCTACTCCTGCTACGTCTAGCTTTGATTGTTGGAGATCTACTTGCAGGAGCTTTCGTTaGTTTGCGGTGTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: ARIASTPATSSFDCWRSTCRSFR*FAVCIF
Trigger: AAAGATGCACACCGCAAAGCAACGAAAGCTCCTGCA...AGTAGATCTCCAACAATCAAAGCTAGACGTAGCAGGAGTAGAAGCTATTCTCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCTGTGCCAGCTGTTTTaGAGGAGCTTTCGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALLCQLF*RSFRCF
Trigger: AAAGCAACGAAAGCTCCTGCAAAACAGCTGGCACAG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTCAGTGCACTGGACTGTaGCAGCTGTTTTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFQCTGL*QLFCRS
Trigger: GCTCCTGCAAAACAGCTGGCACAGTCCAGTGCACTG...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAAAGTGAGGGAAGCCAGTaGACTGGACTGTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQSEGSQ*TGLCQL
Trigger: CAGCTGGCACAGTCCAGTGCACTGGCTTCCCTCACT...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GCTATTGCTACTGGAACTACCACTACTAGAACTTCCCGACCTACTCCTTCCTTGAAAGCTTCCTGTTTTTaGCGGATTCGATGCCGTAAT +
Preference number: 4 (lower is better)
Translates to: AIATGTTTTRTSRPTPSLKASCF*RIRCRN
Trigger: ATTACGGCATCGAATCCGGCAAAAACAGGAAGCTTT...CAAGGAAGGAGTAGGTCGGGAAGTTCTAGTAGTGGTAGTTCCAGTAGCAATAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCTTGTGTTTGCGGCTTaGCTTCTTACCAGACCTTTG +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALLVFAA*LLTRPL
Trigger: CAAAGGTCTGGTAAGAAGGCAAGCCGCAAACACAAG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTGCATCCATTGTTGCTaGTTCAAGGGCCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRCIHCC*FKGHCC
Trigger: GCAGCAGTGGCCCTTGAACCAGCAACAATGGATGCA...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCCAATCAATCTGGCTTaGATCCTGTTGGTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALPINLA*ILLVLE
Trigger: TTCCAGCACCAACAGGATCCAAGCCAGATTGATTGG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTGGGCAATCCAAGCTTaGGCCAATGCAGCCCAATCA +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRWAIQA*ANAAQS
Trigger: TGATTGGGCTGCATTGGCCCAAGCTTGGATTGCCCA...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGCCTGAAGCTTCTCTTTaGGCAATCCAAGCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRPEASL*AIQAWA
Trigger: GGCCCAAGCTTGGATTGCCCAAAGAGAAGCTTCAGG...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTTGGGCCTGGTGTTGGTaGCATCCATGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCWAWCW*HPWLIW
Trigger: CCAGATCAGCCATGGATGCCACCAACACCAGGCCCA...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACCATTGGGCCTGGTGTTaGTGGCATCCATGGCTGATC +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYHWAWC*WHPWLI
Trigger: GATCAGCCATGGATGCCACCAACACCAGGCCCAATG...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTCATTGGGCCTGGTGTTaGTGGCATCCATGGCTGATC +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFHWAWC*WHPWLI
Trigger: GATCAGCCATGGATGCCACCAACACCAGGCCCAATG...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGAATGTCCATTGGGCCTaGTGTTGGTGGCATCCATGG +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMNVHWA*CWWHPW
Trigger: CCATGGATGCCACCAACACCAGGCCCAATGGACATT...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTAGGTGCTGGAGGTCCTaGAGGTCCTGGTTGCCAATA +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFRCWRS*RSWLPI
Trigger: TATTGGCAACCAGGACCTCCAGGACCTCCAGCACCT...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTGGGAAGCCAGTGCACTaGACTGTGCCAGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFGKPVH*TVPAVL
Trigger: CAAAACAGCTGGCACAGTCCAGTGCACTGGCTTCCC...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GGAACTGGGGATGGACTTCTGGTGACTTTCCCACTACTTGCAGCCTCAACATTTTCTAGCTTTGATTGTTaGAGATCTACTCCTACTGTG +
Preference number: 4 (lower is better)
Translates to: GTGDGLLVTFPLLAASTFSSFDC*RSTPTV
Trigger: CACAGTAGGAGTAGATCTCCAACAATCAAAGCTAGA...AAATGTTGAGGCTGCAAGTAGTGGGAAAGTCACCAGAAGTCCATCCCCAGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTGCGACTGGCACGATTaGTTCGTCTATCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRCDWHD*FVYPLS
Trigger: GCTCAAGGGATAGACGAACCAATCGTGCCAGTCGCA...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGTGCGACTGGCACGATTaGTTCGTCTATCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMCDWHD*FVYPLS
Trigger: GCTCAAGGGATAGACGAACCAATCGTGCCAGTCGCA...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR TCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAGGGTGTGGGGGTTGCTaGTGCATTCCCCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKGCGGC*CIPHSG
Trigger: ACCAGAATGGGGAATGCATCAGCAACCCCCACACCC...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGAACGCTGACGATCCCTaGATGATGATGGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMNADDP*MMMAFL
Trigger: GAGAAAGGCCATCATCATTCAGGGATCGTCAGCGTT...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGAGGAAGTGCAATAGGTaGACGCTGACGATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMRKCNR*TLTIPE
Trigger: TTCAGGGATCGTCAGCGTTCACCTATTGCACTTCCT...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGTCACTGTGCTCTTCTTaGGGAACTGGGGATGGACTT +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMSLCSS*GTGDGL
Trigger: AAGTCCATCCCCAGTTCCTCAAGAAGAGCACAGTGA...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTTCGTCTATCCCTTaGGCGACTTCTACTTCTACG +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMGSSIP*ATSTST
Trigger: CGTAGAAGTAGAAGTCGCTCAAGGGATAGACGAACC...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTGACTGCATCCATTGTTaGTGGTTCAAGGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFDCIHC*WFKGHC
Trigger: GCAGTGGCCCTTGAACCAGCAACAATGGATGCAGTC...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACCCAAGCTTGGGCCAATaGAGCCCAATCAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYPSLGQ*SPINLA
Trigger: AGCCAGATTGATTGGGCTGCATTGGCCCAAGCTTGG...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTGTGGTTGTTCTACCATaGTTTGCTGTCCTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALVVVLP*FAVLKL
Trigger: AAGCTTCAGGACAGCAAAGCATGGTAGAACAACCAC...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTGTTCACTGGCCCCACTaGAAAATTATCGGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFVHWPH*KIIGWS
Trigger: GGACCACCCGATAATTTTGCAGTGGGGCCAGTGAAC...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TCTACTCCTGCTACGTCTAGCTTTGATTGTTGGAGATCTACTCCTACTGTGTCTAAGCGGGAAGAGTCCTaGGTTTTACTGCGTCAATTT +
Preference number: 4 (lower is better)
Translates to: STPATSSFDCWRSTPTVSKREES*VLLRQF
Trigger: AAATTGACGCAGTAAAACGCAGGACTCTTCCCGCTT...AGACACAGTAGGAGTAGATCTCCAACAATCAAAGCTAGACGTAGCAGGAGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAGCGGGAAGAGTCCTaGGTTTTACTGCGTCAATTT +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALKREES*VLLRQF
Trigger: AAATTGACGCAGTAAAACGCAGGACTCTTCCCGCTT...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCGTTGCTTTGCGGTGTaGATCTTTGGCTACGTAATA +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALRCFAV*IFGYVI
Trigger: TATTACGTAGCCAAAGATGCACACCGCAAAGCAACG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GCGAGAATAGCTTCTACTCCTGCTACGTCTAGCTTTGATTGTTGGAGATCTACTCGTTGCTTTGCGGTGTaGATCTTTGGCTACGTAATA +
Preference number: 4 (lower is better)
Translates to: ARIASTPATSSFDCWRSTRCFAV*IFGYVI
Trigger: TATTACGTAGCCAAAGATGCACACCGCAAAGCAACG...AGTAGATCTCCAACAATCAAAGCTAGACGTAGCAGGAGTAGAAGCTATTCTCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR GCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAGTGCACTGGACTGTaGCAGCTGTTTTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCQCTGL*QLFCRS
Trigger: GCTCCTGCAAAACAGCTGGCACAGTCCAGTGCACTG...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GCTATTGCTACTGGAACTACCACTACTAGAACTTCCCGACCTACTCCTTCCTTGTTTTGCCGGATTCGATaGCGTAATTCTTCATCATCA +
Preference number: 4 (lower is better)
Translates to: AIATGTTTTRTSRPTPSLFCRIR*RNSSSS
Trigger: TGATGATGAAGAATTACGGCATCGAATCCGGCAAAA...CAAGGAAGGAGTAGGTCGGGAAGTTCTAGTAGTGGTAGTTCCAGTAGCAATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR GCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTATCTCGACTCCTACTaGGACTGGCACGATTGGTTC +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRYLDSY*DWHDWF
Trigger: GAACCAATCGTGCCAGTCGCAGTAGGAGTCGAGATA...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTTTGGATCCTGTTGGTaGTGGAATGACTGCATCCAT +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALFGSCW*WNDCIH
Trigger: ATGGATGCAGTCATTCCAGCACCAACAGGATCCAAA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481229.2
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTGCATCCATTGTTGCTaGTTCAAGGGCCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFCIHCC*FKGHCC
Trigger: GCAGCAGTGGCCCTTGAACCAGCAACAATGGATGCA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTGCAGCCCAATCAATCTaGCTTGGATCCTGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFAAQSI*LGSCWC
Trigger: GCACCAACAGGATCCAAGCCAGATTGATTGGGCTGC...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACTGGGCAATCCAAGCTTaGGCCAATGCAGCCCAATCA +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYWAIQA*ANAAQS
Trigger: TGATTGGGCTGCATTGGCCCAAGCTTGGATTGCCCA...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTGGGCAATCCAAGCTTaGGCCAATGCAGCCCAATCA +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFWAIQA*ANAAQS
Trigger: TGATTGGGCTGCATTGGCCCAAGCTTGGATTGCCCA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTCCTGAAGCTTCTCTTTaGGCAATCCAAGCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFPEASL*AIQAWA
Trigger: GGCCCAAGCTTGGATTGCCCAAAGAGAAGCTTCAGG...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACCCTGAAGCTTCTCTTTaGGCAATCCAAGCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYPEASL*AIQAWA
Trigger: GGCCCAAGCTTGGATTGCCCAAAGAGAAGCTTCAGG...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCTGGGCCTGGTGTTGGTaGCATCCATGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTWAWCW*HPWLIW
Trigger: CCAGATCAGCCATGGATGCCACCAACACCAGGCCCA...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGATGGGCCTGGTGTTGGTaGCATCCATGGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGWAWCW*HPWLIW
Trigger: CCAGATCAGCCATGGATGCCACCAACACCAGGCCCA...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCACATTGGGCCTGGTGTTaGTGGCATCCATGGCTGATC +
Preference number: 4 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGAHWAWC*WHPWLI
Trigger: GATCAGCCATGGATGCCACCAACACCAGGCCCAATG...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAATGTCCATTGGGCCTaGTGTTGGTGGCATCCATGG +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYNVHWA*CWWHPW
Trigger: CCATGGATGCCACCAACACCAGGCCCAATGGACATT...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGAGGAACAATGTCCATTaGGCCTGGTGTTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRRNNVH*AWCWWH
Trigger: ATGCCACCAACACCAGGCCCAATGGACATTGTTCCT...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTAAATCCACCTTGCGGTaGACCAAAAGCAGCCCCATG +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFKSTLR*TKSSPM
Trigger: CATGGGGCTGCTTTTGGTCCACCGCAAGGTGGATTT...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTAGGTCCTGGAGGTCCTaGTTGCCAATAAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFRSWRS*LPIRRM
Trigger: CATCCTCCTTATTGGCAACCAGGACCTCCAGGACCT...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTAGGTGCTGGAGGTCCTaGAGGTCCTGGTTGCCAATA +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCRCWRS*RSWLPI
Trigger: TATTGGCAACCAGGACCTCCAGGACCTCCAGCACCT...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTCTTTCTCTTCGATTCTaGGGAGGTGCTGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFLSLRF*GGAGGP
Trigger: AGGACCTCCAGCACCTCCCCAGAATCGAAGAGAAAG...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTTGAGGAACTGGGGATaGACTTCTGGTGACTTTCCC +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRLRNWG*TSGDFP
Trigger: GGGAAAGTCACCAGAAGTCCATCCCCAGTTCCTCAA...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGCTCTTCTTGAGGAACTaGGGATGGACTTCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRLFLRN*GWTSGD
Trigger: GTCACCAGAAGTCCATCCCCAGTTCCTCAAGAAGAG...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCAGGGAAGCCAGTGCACTaGACTGTGCCAGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGAGKPVH*TVPAVL
Trigger: CAAAACAGCTGGCACAGTCCAGTGCACTGGCTTCCC...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTGGGAAGCCAGTGCACTaGACTGTGCCAGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCGKPVH*TVPAVL
Trigger: CAAAACAGCTGGCACAGTCCAGTGCACTGGCTTCCC...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACTGCGACTGGCACGATTaGTTCGTCTATCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYCDWHD*FVYPLS
Trigger: GCTCAAGGGATAGACGAACCAATCGTGCCAGTCGCA...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGGACTCCTACTGCGACTaGCACGATTGGTTCGTCTAT +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRDSYCD*HDWFVY
Trigger: ATAGACGAACCAATCGTGCCAGTCGCAGTAGGAGTC...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTATTCCCTTAATGGTGTaGTTTACCCCCACTCCACAA +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALIPLMV*FTPTPQ
Trigger: TTGTGGAGTGGGGGTAAACCACACCATTAAGGGAAT...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp AAATACATTATAATCTTATGGGACCACTGTTGTACATGTGGCCCGTCATTGACTGGGAACAAGACAAGATaGCGCCCGATTTGTCTCACC +
Preference number: 4 (lower is better)
Translates to: KYIIILWDHCCTCGPSLTGNKTR*RPICLT
Trigger: GGTGAGACAAATCGGGCGCCATCTTGTCTTGTTCCC...AGTCAATGACGGGCCACATGTACAACAGTGGTCCCATAAGATTATAATGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681615.1
CDS-3UTR TCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGCATGCTTTGCTGTCCTaGAGCTTCTCTTTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRHALLS*SFSLGN
Trigger: ATTGCCCAAAGAGAAGCTTCAGGACAGCAAAGCATG...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAACGCTGACGATCCCTaGATGATGATGGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYNADDP*MMMAFL
Trigger: GAGAAAGGCCATCATCATTCAGGGATCGTCAGCGTT...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGGCAATAGGTGAACGCTaGCGATCCCTGAATGATGAT +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRAIGER*RSLNDD
Trigger: ATCATCATTCAGGGATCGTCAGCGTTCACCTATTGC...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTAGGAAGTGCAATAGGTaGACGCTGACGATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFRKCNR*TLTIPE
Trigger: TTCAGGGATCGTCAGCGTTCACCTATTGCACTTCCT...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTGGGATGGACTTCTGGTaGCTTTCCCACTACTTGCAG +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCGMDFW*LSHYLQ
Trigger: CTGCAAGTAGTGGGAAAGTCACCAGAAGTCCATCCC...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTCACTGTGCTCTTCTTaGGGAACTGGGGATGGACTT +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFSLCSS*GTGDGL
Trigger: AAGTCCATCCCCAGTTCCTCAAGAAGAGCACAGTGA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp GCTATTGCTACTGGAACTACCACTACTAGAACTTCCCGACCTACTCCTTCCTTGCTAAGATTTCCACGTTaGTCATCAATTTTACGCCTA +
Preference number: 4 (lower is better)
Translates to: AIATGTTTTRTSRPTPSLLRFPR*SSILRL
Trigger: TAGGCGTAAAATTGATGATCAACGTGGAAATCTTAG...CAAGGAAGGAGTAGGTCGGGAAGTTCTAGTAGTGGTAGTTCCAGTAGCAATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR TCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTTCTTACCAGACCTTTaGGATTTCTCCACGGATCGC +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRFLPDL*DFSTDR
Trigger: GCGATCCGTGGAGAAATCTCAAAGGTCTGGTAAGAA...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATCTTATGGGACCACTGTTGTACATGTGGCCCGTCATTGACTGAAACGTCGTTATTTCTATCTTCATGTTaGGGAAACACTGATCTTGGC +
Preference number: 4 (lower is better)
Translates to: ILWDHCCTCGPSLTETSLFLSSC*GNTDLG
Trigger: GCCAAGATCAGTGTTTCCTCAACATGAAGATAGAAA...TAACGACGTTTCAGTCAATGACGGGCCACATGTACAACAGTGGTCCCATAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681615.1
CDS-3UTR GCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGCTCCAACGCTTTCGATaGTTCTACTTCTTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRLQRFR*FYFFGN
Trigger: GTTCCCGAAGAAGTAGAAGCATCGAAAGCGTTGGAG...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369239.10
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCAGACTGCATCCATTGTTaGTGGTTCAAGGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGADCIHC*WFKGHC
Trigger: GCAGTGGCCCTTGAACCAGCAACAATGGATGCAGTC...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTGACTGCATCCATTGTTaGTGGTTCAAGGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCDCIHC*WFKGHC
Trigger: GCAGTGGCCCTTGAACCAGCAACAATGGATGCAGTC...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ACTAGTACTACTAGTTCTGCTATTGCTACTGGAACTACCACTACTAGAACTTCCCTTGGATCCTGTTGGTaGTGGAATGACTGCATCCAT +
Preference number: 4 (lower is better)
Translates to: TSTTSSAIATGTTTTRTSLGSCW*WNDCIH
Trigger: ATGGATGCAGTCATTCCAGCACCAACAGGATCCAAG...GGAAGTTCTAGTAGTGGTAGTTCCAGTAGCAATAGCAGAACTAGTAGTACTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTGTTCTACCATGCTTTaGTGTCCTGAAGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALCSTML*CPEASL
Trigger: AAGAGAAGCTTCAGGACAGCAAAGCATGGTAGAACA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATCTTATGGGACCACTGTTGTACATGTGGCCCGTCATTGACTGAAACGTCGTTAATTCCCCATTCTGGTTaGCACATTCTGTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: ILWDHCCTCGPSLTETSLIPHSG*HILLKF
Trigger: AAACTTCAACAGAATGTGGCAACCAGAATGGGGAAT...TAACGACGTTTCAGTCAATGACGGGCCACATGTACAACAGTGGTCCCATAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681615.1
CDS-3UTR GCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTGTTCACTGGCCCCACTaGAAAATTATCGGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCVHWPH*KIIGWS
Trigger: GGACCACCCGATAATTTTGCAGTGGGGCCAGTGAAC...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCAGTTCACTGGCCCCACTaGAAAATTATCGGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGAVHWPH*KIIGWS
Trigger: GGACCACCCGATAATTTTGCAGTGGGGCCAGTGAAC...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTGACTTTCCCACTACTTaGAGCCTCAACATTTTCAGT +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALDFPTT*SLNIFS
Trigger: ACTGAAAATGTTGAGGCTGCAAGTAGTGGGAAAGTC...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ACTAGTACTACTAGTTCTGCTATTGCTACTGGAACTACCACTACTAGAACTTCCGAGCTTTCGTTGCTTTaGGGTGTGCATCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: TSTTSSAIATGTTTTRTSELSLL*GVHLWL
Trigger: TAGCCAAAGATGCACACCGCAAAGCAACGAAAGCTC...GGAAGTTCTAGTAGTGGTAGTTCCAGTAGCAATAGCAGAACTAGTAGTACTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR GCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGAGCTTTCGTTGCTTTaGGGTGTGCATCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMELSLL*GVHLWL
Trigger: TAGCCAAAGATGCACACCGCAAAGCAACGAAAGCTC...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGCTGTGCCAGCTGTTTTaGAGGAGCTTTCGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMLCQLF*RSFRCF
Trigger: AAAGCAACGAAAGCTCCTGCAAAACAGCTGGCACAG...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATCAGTGCACTGGACTGTaGCAGCTGTTTTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYQCTGL*QLFCRS
Trigger: GCTCCTGCAAAACAGCTGGCACAGTCCAGTGCACTG...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACAGTGCACTGGACTGTaGCAGCTGTTTTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKQCTGL*QLFCRS
Trigger: GCTCCTGCAAAACAGCTGGCACAGTCCAGTGCACTG...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAGCTTCCTGTTTTTaGCGGATTCGATGCCGTAAT +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALKASCF*RIRCRN
Trigger: ATTACGGCATCGAATCCGGCAAAAACAGGAAGCTTT...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGCTTGTGTTTGCGGCTTaGCTTCTTACCAGACCTTTG +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRLVFAA*LLTRPL
Trigger: CAAAGGTCTGGTAAGAAGGCAAGCCGCAAACACAAG...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTACACAGCCACAATGTaGCTCTATAATGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALYTATM*LYNETS
Trigger: GCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TCTACTCCTGCTACGTCTAGCTTTGATTGTTGGAGATCTACTCCTACTGTGTCTTACACAGCCACAATGTaGCTCTATAATGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: STPATSSFDCWRSTPTVSYTATM*LYNETS
Trigger: GCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTA...AGACACAGTAGGAGTAGATCTCCAACAATCAAAGCTAGACGTAGCAGGAGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAATGCATCCATTGTTGCTaGTTCAAGGGCCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQCIHCC*FKGHCC
Trigger: GCAGCAGTGGCCCTTGAACCAGCAACAATGGATGCA...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTGGCTTGGATCCTGTTaGTGCTGGAATGACTGCATC +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFWLGSC*CWNDCI
Trigger: GATGCAGTCATTCCAGCACCAACAGGATCCAAGCCA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACTGGCTTGGATCCTGTTaGTGCTGGAATGACTGCATC +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYWLGSC*CWNDCI
Trigger: GATGCAGTCATTCCAGCACCAACAGGATCCAAGCCA...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGCCAATCAATCTGGCTTaGATCCTGTTGGTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMPINLA*ILLVLE
Trigger: TTCCAGCACCAACAGGATCCAAGCCAGATTGATTGG...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTGCAGCCCAATCAATCTaGCTTGGATCCTGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCAAQSI*LGSCWC
Trigger: GCACCAACAGGATCCAAGCCAGATTGATTGGGCTGC...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAATGGGCAATCCAAGCTTaGGCCAATGCAGCCCAATCA +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQWAIQA*ANAAQS
Trigger: TGATTGGGCTGCATTGGCCCAAGCTTGGATTGCCCA...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCATATCTTGTCCATTTaGCATCATTCCTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALHILSI*HHSWWL
Trigger: CAACCACCAGGAATGATGCCAAATGGACAAGATATG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATCATTGGGCCTGGTGTTaGTGGCATCCATGGCTGATC +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYHWAWC*WHPWLI
Trigger: GATCAGCCATGGATGCCACCAACACCAGGCCCAATG...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACATTGGGCCTGGTGTTaGTGGCATCCATGGCTGATC +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKHWAWC*WHPWLI
Trigger: GATCAGCCATGGATGCCACCAACACCAGGCCCAATG...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTAATGTCCATTGGGCCTaGTGTTGGTGGCATCCATGG +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCNVHWA*CWWHPW
Trigger: CCATGGATGCCACCAACACCAGGCCCAATGGACATT...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTAGGAACAATGTCCATTaGGCCTGGTGTTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFRNNVH*AWCWWH
Trigger: ATGCCACCAACACCAGGCCCAATGGACATTGTTCCT...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTAAATCCACCTTGCGGTaGACCAAAAGCAGCCCCATG +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCKSTLR*TKSSPM
Trigger: CATGGGGCTGCTTTTGGTCCACCGCAAGGTGGATTT...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCAAGGTCCTGGAGGTCCTaGTTGCCAATAAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGARSWRS*LPIRRM
Trigger: CATCCTCCTTATTGGCAACCAGGACCTCCAGGACCT...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAAAGGTCCTGGAGGTCCTaGTTGCCAATAAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQRSWRS*LPIRRM
Trigger: CATCCTCCTTATTGGCAACCAGGACCTCCAGGACCT...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTAGGTGCTGGAGGTCCTaGAGGTCCTGGTTGCCAATA +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFRCWRS*RSWLPI
Trigger: TATTGGCAACCAGGACCTCCAGGACCTCCAGCACCT...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACTACTGCGTCAATTTGTaGAGGCTCCTGCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYYCVNL*RLLLHR
Trigger: CCTGTGAAGCAGGAGCCTCCACAAATTGACGCAGTA...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTTGAGGAACTGGGGATaGACTTCTGGTGACTTTCCC +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFLRNWG*TSGDFP
Trigger: GGGAAAGTCACCAGAAGTCCATCCCCAGTTCCTCAA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACTTGAGGAACTGGGGATaGACTTCTGGTGACTTTCCC +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYLRNWG*TSGDFP
Trigger: GGGAAAGTCACCAGAAGTCCATCCCCAGTTCCTCAA...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACCTCTTCTTGAGGAACTaGGGATGGACTTCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYLFLRN*GWTSGD
Trigger: GTCACCAGAAGTCCATCCCCAGTTCCTCAAGAAGAG...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTCTCTTCTTGAGGAACTaGGGATGGACTTCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFLFLRN*GWTSGD
Trigger: GTCACCAGAAGTCCATCCCCAGTTCCTCAAGAAGAG...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATGGGAAGCCAGTGCACTaGACTGTGCCAGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYGKPVH*TVPAVL
Trigger: CAAAACAGCTGGCACAGTCCAGTGCACTGGCTTCCC...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCGGGAAGCCAGTGCACTaGACTGTGCCAGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTGKPVH*TVPAVL
Trigger: CAAAACAGCTGGCACAGTCCAGTGCACTGGCTTCCC...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAATGCGACTGGCACGATTaGTTCGTCTATCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQCDWHD*FVYPLS
Trigger: GCTCAAGGGATAGACGAACCAATCGTGCCAGTCGCA...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTTGCGACTGGCACGATTaGTTCGTCTATCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCCDWHD*FVYPLS
Trigger: GCTCAAGGGATAGACGAACCAATCGTGCCAGTCGCA...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GGAACTGGGGATGGACTTCTGGTGACTTTCCCACTACTTGCAGCCTCAACATTTTCTGGCAAAAGTCCATaGGTACAATTTACAAACTTT +
Preference number: 4 (lower is better)
Translates to: GTGDGLLVTFPLLAASTFSGKSP*VQFTNF
Trigger: AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGA...AAATGTTGAGGCTGCAAGTAGTGGGAAAGTCACCAGAAGTCCATCCCCAGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679525.1
3UTR CAA 72 bp CTAGAGACAGTACTACTAGTACTACTAGTTCTGCTATaGCTACTGGAACTACCACTACTAGAACTTCCCGAC +
Preference number: 4 (lower is better)
Translates to: LETVLLVLLVLL*LLELPLLELPD
Trigger: GTCGGGAAGTTCTAGTAGTGGTAGTTCCAGTAGCAATAGCAGAACTAGTAGTACTAGTAGTACTGTCTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR TCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCTGTTGGTGCTGGAATaGCTGCATCCATTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCLLVLE*LHPLLL
Trigger: CAGCAACAATGGATGCAGTCATTCCAGCACCAACAG...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGCCTTGGAAATTCCCATaGTTGTTTGGACCAGATTCC +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRPWKFP*LFGPDS
Trigger: GGAATCTGGTCCAAACAATCATGGGAATTTCCAAGG...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGCCTTGGAAATTCCCATaGTTGTTTGGACCAGATTCC +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMPWKFP*LFGPDS
Trigger: GGAATCTGGTCCAAACAATCATGGGAATTTCCAAGG...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGGTTGCCACATTCTGTTaGAGTTTGAATCCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRVATFC*SLNPLG
Trigger: TCCAAGGGGATTCAAACTTCAACAGAATGTGGCAAC...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAAAACGCTGACGATCCCTaGATGATGATGGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQNADDP*MMMAFL
Trigger: GAGAAAGGCCATCATCATTCAGGGATCGTCAGCGTT...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCAAACGCTGACGATCCCTaGATGATGATGGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGANADDP*MMMAFL
Trigger: GAGAAAGGCCATCATCATTCAGGGATCGTCAGCGTT...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTAGGAAGTGCAATAGGTaGACGCTGACGATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCRKCNR*TLTIPE
Trigger: TTCAGGGATCGTCAGCGTTCACCTATTGCACTTCCT...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATGGGATGGACTTCTGGTaGCTTTCCCACTACTTGCAG +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYGMDFW*LSHYLQ
Trigger: CTGCAAGTAGTGGGAAAGTCACCAGAAGTCCATCCC...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTGTCAGCAACATCATTTaGTACTCTTTCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALVSNII*YSFSSS
Trigger: TGAAGAGGAGAAAGAGTATCAAATGATGTTGCTGAC...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAAGGTTCGTCTATCCCTTaGGCGACTTCTACTTCTACG +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQGSSIP*ATSTST
Trigger: CGTAGAAGTAGAAGTCGCTCAAGGGATAGACGAACC...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTTCTTACCAGACCTTTaGGATTTCTCCACGGATCGC +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFFLPDL*DFSTDR
Trigger: GCGATCCGTGGAGAAATCTCAAAGGTCTGGTAAGAA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAAGTATACTACCTTaGTCGGGACTTAGACTTGTG +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALKSILP*SGLRLV
Trigger: CACAAGTCTAAGTCCCGATCAAGGTAGTATACTTTT...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
CDS-3UTR TCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGACTGGTGCACTGGCTTaGTTGATTCCAGCAATTTCA +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMTGALA*LIPAIS
Trigger: TGAAATTGCTGGAATCAATCAAGCCAGTGCACCAGT...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACCTCCAACGCTTTCGATaGTTCTACTTCTTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYLQRFR*FYFFGN
Trigger: GTTCCCGAAGAAGTAGAAGCATCGAAAGCGTTGGAG...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369239.10
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCGACTGCATCCATTGTTaGTGGTTCAAGGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTDCIHC*WFKGHC
Trigger: GCAGTGGCCCTTGAACCAGCAACAATGGATGCAGTC...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAGACTGCATCCATTGTTaGTGGTTCAAGGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKDCIHC*WFKGHC
Trigger: GCAGTGGCCCTTGAACCAGCAACAATGGATGCAGTC...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACCTTGGATCCTGTTGGTaGTGGAATGACTGCATCCAT +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYLGSCW*WNDCIH
Trigger: ATGGATGCAGTCATTCCAGCACCAACAGGATCCAAG...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTCCAAGCTTGGGCCAATaGAGCCCAATCAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFPSLGQ*SPINLA
Trigger: AGCCAGATTGATTGGGCTGCATTGGCCCAAGCTTGG...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACCAAGCTTGGGCCAATaGAGCCCAATCAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKPSLGQ*SPINLA
Trigger: AGCCAGATTGATTGGGCTGCATTGGCCCAAGCTTGG...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGGTGGTTGTTCTACCATaGTTTGCTGTCCTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRVVVLP*FAVLKL
Trigger: AAGCTTCAGGACAGCAAAGCATGGTAGAACAACCAC...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTATTCCCCATTCTGGTTaGCACATTCTGTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALIPHSG*HILLKF
Trigger: AAACTTCAACAGAATGTGGCAACCAGAATGGGGAAT...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TCTACTCCTGCTACGTCTAGCTTTGATTGTTGGAGATCTACTCCTACTGTGTCTATTCCCCATTCTGGTTaGCACATTCTGTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: STPATSSFDCWRSTPTVSIPHSG*HILLKF
Trigger: AAACTTCAACAGAATGTGGCAACCAGAATGGGGAAT...AGACACAGTAGGAGTAGATCTCCAACAATCAAAGCTAGACGTAGCAGGAGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR GCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACCACTGTCCTGACTGTTaGTGTCTTCAGAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYHCPDC*CLQKEE
Trigger: TTCCTCCTTCTGAAGACAGCAACAGTCAGGACAGTG...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAGTTCACTGGCCCCACTaGAAAATTATCGGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKVHWPH*KIIGWS
Trigger: GGACCACCCGATAATTTTGCAGTGGGGCCAGTGAAC...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTGTTCACTGGCCCCACTaGAAAATTATCGGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFVHWPH*KIIGWS
Trigger: GGACCACCCGATAATTTTGCAGTGGGGCCAGTGAAC...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGAAGCGGGAAGAGTCCTaGGTTTTACTGCGTCAATTT +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRKREES*VLLRQF
Trigger: AAATTGACGCAGTAAAACGCAGGACTCTTCCCGCTT...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGCGTTGCTTTGCGGTGTaGATCTTTGGCTACGTAATA +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRRCFAV*IFGYVI
Trigger: TATTACGTAGCCAAAGATGCACACCGCAAAGCAACG...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTGAGCTTTCGTTGCTTTaGGGTGTGCATCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFELSLL*GVHLWL
Trigger: TAGCCAAAGATGCACACCGCAAAGCAACGAAAGCTC...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTGCAGGAGCTTTCGTTaGTTTGCGGTGTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFCRSFR*FAVCIF
Trigger: AAAGATGCACACCGCAAAGCAACGAAAGCTCCTGCA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACTGCAGGAGCTTTCGTTaGTTTGCGGTGTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYCRSFR*FAVCIF
Trigger: AAAGATGCACACCGCAAAGCAACGAAAGCTCCTGCA...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTTTTGCCGGATTCGATaGCGTAATTCTTCATCATCA +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALFCRIR*RNSSSS
Trigger: TGATGATGAAGAATTACGGCATCGAATCCGGCAAAA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTTATCTCGACTCCTACTaGGACTGGCACGATTGGTTC +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCYLDSY*DWHDWF
Trigger: GAACCAATCGTGCCAGTCGCAGTAGGAGTCGAGATA...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR GCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAATATCTCGACTCCTACTaGGACTGGCACGATTGGTTC +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQYLDSY*DWHDWF
Trigger: GAACCAATCGTGCCAGTCGCAGTAGGAGTCGAGATA...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATCTTATGGGACCACTGTTGTACATGTGGCCCGTCATTGACTGAAACGTCGTTAAAATTGACACAAACCTaGATAATACAGCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: ILWDHCCTCGPSLTETSLKLTQT*IIQHSS
Trigger: GGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTT...TAACGACGTTTCAGTCAATGACGGGCCACATGTACAACAGTGGTCCCATAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681615.1
CDS-3UTR CCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAATGCATCCATTGTTGCTaGTTCAAGGGCCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKCIHCC*FKGHCC
Trigger: GCAGCAGTGGCCCTTGAACCAGCAACAATGGATGCA...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp AAATACATTATAATCTTATGGGACCACTGTTGTACATGTGGCCCGTCATTGACTCCAATCAATCTGGCTTaGATCCTGTTGGTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: KYIIILWDHCCTCGPSLTPINLA*ILLVLE
Trigger: TTCCAGCACCAACAGGATCCAAGCCAGATTGATTGG...AGTCAATGACGGGCCACATGTACAACAGTGGTCCCATAAGATTATAATGTATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681615.1
CDS-3UTR CCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATGCAGCCCAATCAATCTaGCTTGGATCCTGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYAAQSI*LGSCWC
Trigger: GCACCAACAGGATCCAAGCCAGATTGATTGGGCTGC...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAGCAGCCCAATCAATCTaGCTTGGATCCTGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKAAQSI*LGSCWC
Trigger: GCACCAACAGGATCCAAGCCAGATTGATTGGGCTGC...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATTGGGCAATCCAAGCTTaGGCCAATGCAGCCCAATCA +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYWAIQA*ANAAQS
Trigger: TGATTGGGCTGCATTGGCCCAAGCTTGGATTGCCCA...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGATGGGCAATCCAAGCTTaGGCCAATGCAGCCCAATCA +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGWAIQA*ANAAQS
Trigger: TGATTGGGCTGCATTGGCCCAAGCTTGGATTGCCCA...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACCTGAAGCTTCTCTTTaGGCAATCCAAGCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKPEASL*AIQAWA
Trigger: GGCCCAAGCTTGGATTGCCCAAAGAGAAGCTTCAGG...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCCTGAAGCTTCTCTTTaGGCAATCCAAGCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTPEASL*AIQAWA
Trigger: GGCCCAAGCTTGGATTGCCCAAAGAGAAGCTTCAGG...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATAATGTCCATTGGGCCTaGTGTTGGTGGCATCCATGG +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYNVHWA*CWWHPW
Trigger: CCATGGATGCCACCAACACCAGGCCCAATGGACATT...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAAATGTCCATTGGGCCTaGTGTTGGTGGCATCCATGG +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKNVHWA*CWWHPW
Trigger: CCATGGATGCCACCAACACCAGGCCCAATGGACATT...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCAAGGAACAATGTCCATTaGGCCTGGTGTTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGARNNVH*AWCWWH
Trigger: ATGCCACCAACACCAGGCCCAATGGACATTGTTCCT...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATAAATCCACCTTGCGGTaGACCAAAAGCAGCCCCATG +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYKSTLR*TKSSPM
Trigger: CATGGGGCTGCTTTTGGTCCACCGCAAGGTGGATTT...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAAAATCCACCTTGCGGTaGACCAAAAGCAGCCCCATG +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKKSTLR*TKSSPM
Trigger: CATGGGGCTGCTTTTGGTCCACCGCAAGGTGGATTT...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTCTTTCTCTTCGATTCTaGGGAGGTGCTGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFLSLRF*GGAGGP
Trigger: AGGACCTCCAGCACCTCCCCAGAATCGAAGAGAAAG...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TCTCCTTCTATCTCTAATCTTTACCCTAGCCCTATTGCTCTCTATTTTAATTCTCTTTCTCTTCGATTCTaGGGAGGTGCTGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: SPSISNLYPSPIALYFNSLSLRF*GGAGGP
Trigger: AGGACCTCCAGCACCTCCCCAGAATCGAAGAGAAAG...AGAATTAAAATAGAGAGCAATAGGGCTAGGGTAAAGATTAGAGATAGAAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATCTTTCTCTTCGATTCTaGGGAGGTGCTGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYLSLRF*GGAGGP
Trigger: AGGACCTCCAGCACCTCCCCAGAATCGAAGAGAAAG...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTTCTCTTCGATTCTaGGGAGGTGCTGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTLSLRF*GGAGGP
Trigger: AGGACCTCCAGCACCTCCCCAGAATCGAAGAGAAAG...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTTACTGCGTCAATTTGTaGAGGCTCCTGCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCYCVNL*RLLLHR
Trigger: CCTGTGAAGCAGGAGCCTCCACAAATTGACGCAGTA...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCATTGAGGAACTGGGGATaGACTTCTGGTGACTTTCCC +
Preference number: 4 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGALRNWG*TSGDFP
Trigger: GGGAAAGTCACCAGAAGTCCATCCCCAGTTCCTCAA...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTTTGAGGAACTGGGGATaGACTTCTGGTGACTTTCCC +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCLRNWG*TSGDFP
Trigger: GGGAAAGTCACCAGAAGTCCATCCCCAGTTCCTCAA...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTTGATTGTTGGAGATCTACTCCTACTGTGTCTCTTTTTCCTTTTAGGAGAAGACTCTTCTTGAGGAACTaGGGATGGACTTCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: FDCWRSTPTVSLFPFRRRLFLRN*GWTSGD
Trigger: GTCACCAGAAGTCCATCCCCAGTTCCTCAAGAAGAG...TCTTCTCCTAAAAGGAAAAAGAGACACAGTAGGAGTAGATCTCCAACAATCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTCTAGCTTTGATTGTTaGAGATCTACTCCTACTGTG +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALSSFDC*RSTPTV
Trigger: CACAGTAGGAGTAGATCTCCAACAATCAAAGCTAGA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGCAATTTGGATCCTGTTaGTGCTGGAATGACTGCATC +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMQFGSC*CWNDCI
Trigger: GATGCAGTCATTCCAGCACCAACAGGATCCAAATTG...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481229.2
CDS-3UTR TCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTCTGTTGGTGCTGGAATaGCTGCATCCATTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFLLVLE*LHPLLL
Trigger: CAGCAACAATGGATGCAGTCATTCCAGCACCAACAG...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGACTGTTGGTGCTGGAATaGCTGCATCCATTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGLLVLE*LHPLLL
Trigger: CAGCAACAATGGATGCAGTCATTCCAGCACCAACAG...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTCCTTGGAAATTCCCATaGTTGTTTGGACCAGATTCC +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFPWKFP*LFGPDS
Trigger: GGAATCTGGTCCAAACAATCATGGGAATTTCCAAGG...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTGTTGCCACATTCTGTTaGAGTTTGAATCCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFVATFC*SLNPLG
Trigger: TCCAAGGGGATTCAAACTTCAACAGAATGTGGCAAC...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACGTTGCCACATTCTGTTaGAGTTTGAATCCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYVATFC*SLNPLG
Trigger: TCCAAGGGGATTCAAACTTCAACAGAATGTGGCAAC...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp AAATACATTATAATCTTATGGGACCACTGTTGTACATGTGGCCCGTCATTGACTGTTGCCACATTCTGTTaGAGTTTGAATCCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: KYIIILWDHCCTCGPSLTVATFC*SLNPLG
Trigger: TCCAAGGGGATTCAAACTTCAACAGAATGTGGCAAC...AGTCAATGACGGGCCACATGTACAACAGTGGTCCCATAAGATTATAATGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681615.1
CDS-3UTR TCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTGGTCCACCAAAGTTGTaGTTGTTCTGGTTAAATATA +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALGPPKL*LFWLNI
Trigger: TATATTTAACCAGAACAATCACAACTTTGGTGGACC...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp TCTACTCCTGCTACGTCTAGCTTTGATTGTTGGAGATCTACTCCTACTGTGTCTGGTCCACCAAAGTTGTaGTTGTTCTGGTTAAATATA +
Preference number: 4 (lower is better)
Translates to: STPATSSFDCWRSTPTVSGPPKL*LFWLNI
Trigger: TATATTTAACCAGAACAATCACAACTTTGGTGGACC...AGACACAGTAGGAGTAGATCTCCAACAATCAAAGCTAGACGTAGCAGGAGTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR TCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATAACGCTGACGATCCCTaGATGATGATGGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYNADDP*MMMAFL
Trigger: GAGAAAGGCCATCATCATTCAGGGATCGTCAGCGTT...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp TCTCCTTCTATCTCTAATCTTTACCCTAGCCCTATTGCTCTCTATTTTAATTCTAACGCTGACGATCCCTaGATGATGATGGCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SPSISNLYPSPIALYFNSNADDP*MMMAFL
Trigger: GAGAAAGGCCATCATCATTCAGGGATCGTCAGCGTT...AGAATTAAAATAGAGAGCAATAGGGCTAGGGTAAAGATTAGAGATAGAAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR TCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTGCAATAGGTGAACGCTaGCGATCCCTGAATGATGAT +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCAIGER*RSLNDD
Trigger: ATCATCATTCAGGGATCGTCAGCGTTCACCTATTGC...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAAGCAATAGGTGAACGCTaGCGATCCCTGAATGATGAT +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQAIGER*RSLNDD
Trigger: ATCATCATTCAGGGATCGTCAGCGTTCACCTATTGC...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTAGGAAGTGCAATAGGTaGACGCTGACGATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFRKCNR*TLTIPE
Trigger: TTCAGGGATCGTCAGCGTTCACCTATTGCACTTCCT...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCAGGAAGTGCAATAGGTaGACGCTGACGATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTRKCNR*TLTIPE
Trigger: TTCAGGGATCGTCAGCGTTCACCTATTGCACTTCCT...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAATCACTGTGCTCTTCTTaGGGAACTGGGGATGGACTT +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKSLCSS*GTGDGL
Trigger: AAGTCCATCCCCAGTTCCTCAAGAAGAGCACAGTGA...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGATCACTGTGCTCTTCTTaGGGAACTGGGGATGGACTT +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGSLCSS*GTGDGL
Trigger: AAGTCCATCCCCAGTTCCTCAAGAAGAGCACAGTGA...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAATTTCTTCATCTGTaGCATCCAGCAGAATTTCTG +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALKFLHL*HPAEFL
Trigger: CAGAAATTCTGCTGGATGTCACAGATGAAGAAATTT...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCGGTTCGTCTATCCCTTaGGCGACTTCTACTTCTACG +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTGSSIP*ATSTST
Trigger: CGTAGAAGTAGAAGTCGCTCAAGGGATAGACGAACC...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTGGTTCGTCTATCCCTTaGGCGACTTCTACTTCTACG +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFGSSIP*ATSTST
Trigger: CGTAGAAGTAGAAGTCGCTCAAGGGATAGACGAACC...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCTAAGATTTCCACGTTaGTCATCAATTTTACGCCTA +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALLRFPR*SSILRL
Trigger: TAGGCGTAAAATTGATGATCAACGTGGAAATCTTAG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTCACCTTTATGCTTATaGCTGTTCCCACTAAGATTT +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALSPLCL*LFPLRF
Trigger: AAATCTTAGTGGGAACAGTCATAAGCATAAAGGTGA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR TCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAATTCTTACCAGACCTTTaGGATTTCTCCACGGATCGC +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQFLPDL*DFSTDR
Trigger: GCGATCCGTGGAGAAATCTCAAAGGTCTGGTAAGAA...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCATTCTTACCAGACCTTTaGGATTTCTCCACGGATCGC +
Preference number: 4 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGAFLPDL*DFSTDR
Trigger: GCGATCCGTGGAGAAATCTCAAAGGTCTGGTAAGAA...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTACTGGTGCACTGGCTTaGTTGATTCCAGCAATTTCA +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFTGALA*LIPAIS
Trigger: TGAAATTGCTGGAATCAATCAAGCCAGTGCACCAGT...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGATGTTGAGGAAACACTaGTCTTGGCAAAAATCTGGC +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRMLRKH*SWQKSG
Trigger: GCCAGATTTTTGCCAAGATCAGTGTTTCCTCAACAT...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTTGGTGCTGGAATGACTaGATCCATTGTTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCWCWND*IHCCWF
Trigger: GAACCAGCAACAATGGATGCAGTCATTCCAGCACCA...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TCTATCTCTAATCTTTACCCTAGCCCTATTGCTCTCTATTTTAATTCTGCGAGATGGTGCTGGAATGACTaGATCCATTGTTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: SISNLYPSPIALYFNSARWCWND*IHCCWF
Trigger: GAACCAGCAACAATGGATGCAGTCATTCCAGCACCA...TCTCGCAGAATTAAAATAGAGAGCAATAGGGCTAGGGTAAAGATTAGAGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR GCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAATGGTGCTGGAATGACTaGATCCATTGTTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQWCWND*IHCCWF
Trigger: GAACCAGCAACAATGGATGCAGTCATTCCAGCACCA...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAACTTGGATCCTGTTGGTaGTGGAATGACTGCATCCAT +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQLGSCW*WNDCIH
Trigger: ATGGATGCAGTCATTCCAGCACCAACAGGATCCAAG...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCTTGGATCCTGTTGGTaGTGGAATGACTGCATCCAT +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCLGSCW*WNDCIH
Trigger: ATGGATGCAGTCATTCCAGCACCAACAGGATCCAAG...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACGTGGTTGTTCTACCATaGTTTGCTGTCCTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYVVVLP*FAVLKL
Trigger: AAGCTTCAGGACAGCAAAGCATGGTAGAACAACCAC...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAACACTGTCCTGACTGTTaGTGTCTTCAGAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQHCPDC*CLQKEE
Trigger: TTCCTCCTTCTGAAGACAGCAACAGTCAGGACAGTG...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTAAGCGGGAAGAGTCCTaGGTTTTACTGCGTCAATTT +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFKREES*VLLRQF
Trigger: AAATTGACGCAGTAAAACGCAGGACTCTTCCCGCTT...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCAGAGCTTTCGTTGCTTTaGGGTGTGCATCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGAELSLL*GVHLWL
Trigger: TAGCCAAAGATGCACACCGCAAAGCAACGAAAGCTC...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTGAGCTTTCGTTGCTTTaGGGTGTGCATCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCELSLL*GVHLWL
Trigger: TAGCCAAAGATGCACACCGCAAAGCAACGAAAGCTC...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCATGCAGGAGCTTTCGTTaGTTTGCGGTGTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGACRSFR*FAVCIF
Trigger: AAAGATGCACACCGCAAAGCAACGAAAGCTCCTGCA...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCTGTGCCAGCTGTTTTaGAGGAGCTTTCGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCLCQLF*RSFRCF
Trigger: AAAGCAACGAAAGCTCCTGCAAAACAGCTGGCACAG...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGATATCTCGACTCCTACTaGGACTGGCACGATTGGTTC +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGYLDSY*DWHDWF
Trigger: GAACCAATCGTGCCAGTCGCAGTAGGAGTCGAGATA...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR GCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAACTTGTGTTTGCGGCTTaGCTTCTTACCAGACCTTTG +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQLVFAA*LLTRPL
Trigger: CAAAGGTCTGGTAAGAAGGCAAGCCGCAAACACAAG...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCACTTGTGTTTGCGGCTTaGCTTCTTACCAGACCTTTG +
Preference number: 4 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGALVFAA*LLTRPL
Trigger: CAAAGGTCTGGTAAGAAGGCAAGCCGCAAACACAAG...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTACACAGCCACAATGTaGCTCTATAATGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRYTATM*LYNETS
Trigger: GCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTA...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTTGGCTTGGATCCTGTTaGTGCTGGAATGACTGCATC +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFWLGSC*CWNDCI
Trigger: GATGCAGTCATTCCAGCACCAACAGGATCCAAGCCA...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAACCAATCAATCTGGCTTaGATCCTGTTGGTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQPINLA*ILLVLE
Trigger: TTCCAGCACCAACAGGATCCAAGCCAGATTGATTGG...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGATTTGGCATCATTCCTaGTGGTTGTTCTACCATGCT +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMIWHHS*WLFYHA
Trigger: AGCATGGTAGAACAACCACCAGGAATGATGCCAAAT...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATAGGAACAATGTCCATTaGGCCTGGTGTTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYRNNVH*AWCWWH
Trigger: ATGCCACCAACACCAGGCCCAATGGACATTGTTCCT...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCAGGAACAATGTCCATTaGGCCTGGTGTTGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTRNNVH*AWCWWH
Trigger: ATGCCACCAACACCAGGCCCAATGGACATTGTTCCT...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTTACTGCGTCAATTTGTaGAGGCTCCTGCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFYCVNL*RLLLHR
Trigger: CCTGTGAAGCAGGAGCCTCCACAAATTGACGCAGTA...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCTACTGCGTCAATTTGTaGAGGCTCCTGCTTCACAGG +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTYCVNL*RLLLHR
Trigger: CCTGTGAAGCAGGAGCCTCCACAAATTGACGCAGTA...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCTTGAGGAACTGGGGATaGACTTCTGGTGACTTTCCC +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTLRNWG*TSGDFP
Trigger: GGGAAAGTCACCAGAAGTCCATCCCCAGTTCCTCAA...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAATTGAGGAACTGGGGATaGACTTCTGGTGACTTTCCC +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKLRNWG*TSGDFP
Trigger: GGGAAAGTCACCAGAAGTCCATCCCCAGTTCCTCAA...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTCTCTTCTTGAGGAACTaGGGATGGACTTCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFLFLRN*GWTSGD
Trigger: GTCACCAGAAGTCCATCCCCAGTTCCTCAAGAAGAG...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTGCGGTGTGCATCTTTaGCTACGTAATAAATTTCTT +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALCGVHL*LRNKFL
Trigger: AAGAAATTTATTACGTAGCCAAAGATGCACACCGCA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATGACTCCTACTGCGACTaGCACGATTGGTTCGTCTAT +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYDSYCD*HDWFVY
Trigger: ATAGACGAACCAATCGTGCCAGTCGCAGTAGGAGTC...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAGACTCCTACTGCGACTaGCACGATTGGTTCGTCTAT +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGDSYCD*HDWFVY
Trigger: ATAGACGAACCAATCGTGCCAGTCGCAGTAGGAGTC...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTTCTTTGCTACTTCCTaGAGACTCAGAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFFFATS*RLRTAP
Trigger: AGGAGCAGTTCTGAGTCTCCAGGAAGTAGCAAAGAA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp AAATACATTATAATCTTATGGGACCACTGTTGTACATGTGGCCCGTCATTGACTTTCTTTGCTACTTCCTaGAGACTCAGAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: KYIIILWDHCCTCGPSLTFFATS*RLRTAP
Trigger: AGGAGCAGTTCTGAGTCTCCAGGAAGTAGCAAAGAA...AGTCAATGACGGGCCACATGTACAACAGTGGTCCCATAAGATTATAATGTATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681615.1
CDS-3UTR CCA 90 bp ATCTTATGGGACCACTGTTGTACATGTGGCCCGTCATTGACTGAAACGTCGTTACTTCTAAAACAGAAGTaGGTGACTGTAGAATATAGT +
Preference number: 4 (lower is better)
Translates to: ILWDHCCTCGPSLTETSLLLKQK*VTVEYS
Trigger: ACTATATTCTACAGTCACCCACTTCTGTTTTAGAAG...TAACGACGTTTCAGTCAATGACGGGCCACATGTACAACAGTGGTCCCATAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTATTCCCTTAATGGTGTaGTTTACCCCCACTCCACAA +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFIPLMV*FTPTPQ
Trigger: TTGTGGAGTGGGGGTAAACCACACCATTAAGGGAAT...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACATTCCCTTAATGGTGTaGTTTACCCCCACTCCACAA +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYIPLMV*FTPTPQ
Trigger: TTGTGGAGTGGGGGTAAACCACACCATTAAGGGAAT...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCAGCAGCCCAATCAATTTaGATCCTGTTGGTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGAAAQSI*ILLVLE
Trigger: TTCCAGCACCAACAGGATCCAAATTGATTGGGCTGC...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481229.2
CDS-3UTR TCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCATGCTTTGCTGTCCTaGAGCTTCTCTTTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTHALLS*SFSLGN
Trigger: ATTGCCCAAAGAGAAGCTTCAGGACAGCAAAGCATG...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTCATGCTTTGCTGTCCTaGAGCTTCTCTTTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFHALLS*SFSLGN
Trigger: ATTGCCCAAAGAGAAGCTTCAGGACAGCAAAGCATG...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGACATGCTTTGCTGTCCTaGAGCTTCTCTTTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGHALLS*SFSLGN
Trigger: ATTGCCCAAAGAGAAGCTTCAGGACAGCAAAGCATG...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATCATGCTTTGCTGTCCTaGAGCTTCTCTTTGGGCAAT +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYHALLS*SFSLGN
Trigger: ATTGCCCAAAGAGAAGCTTCAGGACAGCAAAGCATG...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCCTTGGAAATTCCCATaGTTGTTTGGACCAGATTCC +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCPWKFP*LFGPDS
Trigger: GGAATCTGGTCCAAACAATCATGGGAATTTCCAAGG...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCACCTTGGAAATTCCCATaGTTGTTTGGACCAGATTCC +
Preference number: 4 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGAPWKFP*LFGPDS
Trigger: GGAATCTGGTCCAAACAATCATGGGAATTTCCAAGG...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTGTTGCCACATTCTGTTaGAGTTTGAATCCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCVATFC*SLNPLG
Trigger: TCCAAGGGGATTCAAACTTCAACAGAATGTGGCAAC...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAGCAATAGGTGAACGCTaGCGATCCCTGAATGATGAT +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGAIGER*RSLNDD
Trigger: ATCATCATTCAGGGATCGTCAGCGTTCACCTATTGC...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTGCAATAGGTGAACGCTaGCGATCCCTGAATGATGAT +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFAIGER*RSLNDD
Trigger: ATCATCATTCAGGGATCGTCAGCGTTCACCTATTGC...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATGCAATAGGTGAACGCTaGCGATCCCTGAATGATGAT +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYAIGER*RSLNDD
Trigger: ATCATCATTCAGGGATCGTCAGCGTTCACCTATTGC...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGATTCTTACCAGACCTTTaGGATTTCTCCACGGATCGC +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGFLPDL*DFSTDR
Trigger: GCGATCCGTGGAGAAATCTCAAAGGTCTGGTAAGAA...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGAAAAGTATACTACCTTaGTCGGGACTTAGACTTGTG +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMKSILP*SGLRLV
Trigger: CACAAGTCTAAGTCCCGATCAAGGTAGTATACTTTT...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
CDS-3UTR TCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTTTCTTTGGGGGAGGTaGGAGAAGGTACCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFFLWGR*EKVPLK
Trigger: TTTTAAAGGTACCTTCTCTCACCTCCCCCAAAGAAA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
40% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGGTGCACTGGCTTGATTaGTTCCAGCAATTTCATTTT +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRVHWLD*FQQFHF
Trigger: AAAATGAAATTGCTGGAATCAATCAAGCCAGTGCAC...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGTGCACTGGCTTGATTaGTTCCAGCAATTTCATTTT +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMVHWLD*FQQFHF
Trigger: AAAATGAAATTGCTGGAATCAATCAAGCCAGTGCAC...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTACTGGTGCACTGGCTTaGTTGATTCCAGCAATTTCA +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCTGALA*LIPAIS
Trigger: TGAAATTGCTGGAATCAATCAAGCCAGTGCACCAGT...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTTTCTATCTTCATGTTaGGGAAACACTGATCTTGGC +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRFLSSC*GNTDLG
Trigger: GCCAAGATCAGTGTTTCCTCAACATGAAGATAGAAA...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGATGGTGCTGGAATGACTaGATCCATTGTTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGWCWND*IHCCWF
Trigger: GAACCAGCAACAATGGATGCAGTCATTCCAGCACCA...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCTGGTGCTGGAATGACTaGATCCATTGTTGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTWCWND*IHCCWF
Trigger: GAACCAGCAACAATGGATGCAGTCATTCCAGCACCA...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTGGATCCTGTTGGTaGTGGAATGACTGCATCCAT +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKLGSCW*WNDCIH
Trigger: ATGGATGCAGTCATTCCAGCACCAACAGGATCCAAG...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAAGTGGTTGTTCTACCATaGTTTGCTGTCCTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQVVVLP*FAVLKL
Trigger: AAGCTTCAGGACAGCAAAGCATGGTAGAACAACCAC...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGATTCCCCATTCTGGTTaGCACATTCTGTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRIPHSG*HILLKF
Trigger: AAACTTCAACAGAATGTGGCAACCAGAATGGGGAAT...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATCACTGTCCTGACTGTTaGTGTCTTCAGAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYHCPDC*CLQKEE
Trigger: TTCCTCCTTCTGAAGACAGCAACAGTCAGGACAGTG...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTAAGCGGGAAGAGTCCTaGGTTTTACTGCGTCAATTT +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCKREES*VLLRQF
Trigger: AAATTGACGCAGTAAAACGCAGGACTCTTCCCGCTT...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTGACTTTCCCACTACTTaGAGCCTCAACATTTTCAGT +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFDFPTT*SLNIFS
Trigger: ACTGAAAATGTTGAGGCTGCAAGTAGTGGGAAAGTC...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAACGTTGCTTTGCGGTGTaGATCTTTGGCTACGTAATA +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQRCFAV*IFGYVI
Trigger: TATTACGTAGCCAAAGATGCACACCGCAAAGCAACG...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCGTTGCTTTGCGGTGTaGATCTTTGGCTACGTAATA +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCRCFAV*IFGYVI
Trigger: TATTACGTAGCCAAAGATGCACACCGCAAAGCAACG...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCGAGCTTTCGTTGCTTTaGGGTGTGCATCTTTGGCTA +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTELSLL*GVHLWL
Trigger: TAGCCAAAGATGCACACCGCAAAGCAACGAAAGCTC...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAATGCAGGAGCTTTCGTTaGTTTGCGGTGTGCATCTTT +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKCRSFR*FAVCIF
Trigger: AAAGATGCACACCGCAAAGCAACGAAAGCTCCTGCA...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTGTGCCAGCTGTTTTaGAGGAGCTTTCGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTLCQLF*RSFRCF
Trigger: AAAGCAACGAAAGCTCCTGCAAAACAGCTGGCACAG...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATCTGTGCCAGCTGTTTTaGAGGAGCTTTCGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYLCQLF*RSFRCF
Trigger: AAAGCAACGAAAGCTCCTGCAAAACAGCTGGCACAG...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTAAAGCTTCCTGTTTTTaGCGGATTCGATGCCGTAAT +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFKASCF*RIRCRN
Trigger: ATTACGGCATCGAATCCGGCAAAAACAGGAAGCTTT...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGACTTGTGTTTGCGGCTTaGCTTCTTACCAGACCTTTG +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGLVFAA*LLTRPL
Trigger: CAAAGGTCTGGTAAGAAGGCAAGCCGCAAACACAAG...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATCTTGTGTTTGCGGCTTaGCTTCTTACCAGACCTTTG +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYLVFAA*LLTRPL
Trigger: CAAAGGTCTGGTAAGAAGGCAAGCCGCAAACACAAG...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTACACAGCCACAATGTaGCTCTATAATGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFYTATM*LYNETS
Trigger: GCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACCAAGCTTGGGCCAATaGAGCCCAATCAATTTGGAT +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKPSLGQ*SPINLD
Trigger: ATCCAAATTGATTGGGCTGCATTGGCCCAAGCTTGG...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481229.2
CDS-3UTR CCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATCCAATCAATCTGGCTTaGATCCTGTTGGTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYPINLA*ILLVLE
Trigger: TTCCAGCACCAACAGGATCCAAGCCAGATTGATTGG...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGACCAATCAATCTGGCTTaGATCCTGTTGGTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGPINLA*ILLVLE
Trigger: TTCCAGCACCAACAGGATCCAAGCCAGATTGATTGG...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTATTTGGCATCATTCCTaGTGGTTGTTCTACCATGCT +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFIWHHS*WLFYHA
Trigger: AGCATGGTAGAACAACCACCAGGAATGATGCCAAAT...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTCATATCTTGTCCATTTaGCATCATTCCTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFHILSI*HHSWWL
Trigger: CAACCACCAGGAATGATGCCAAATGGACAAGATATG...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTATGCATTCCCCATTCTaGTTGCCACATTCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFMHSPF*LPHSVE
Trigger: TTCAACAGAATGTGGCAACCAGAATGGGGAATGCAT...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGTGCAAAATTATCGGGTaGTCCACCAAAGTTGTGATT +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMCKIIG*STKVVI
Trigger: AATCACAACTTTGGTGGACCACCCGATAATTTTGCA...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTGCAAAATTATCGGGTaGTCCACCAAAGTTGTGATT +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRCKIIG*STKVVI
Trigger: AATCACAACTTTGGTGGACCACCCGATAATTTTGCA...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTGTTCTAAAACTGATGTaGTTTCATTTGGAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALVLKLM*FHLEFS
Trigger: AGAGAACTCCAAATGAAACCACATCAGTTTTAGAAC...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCTAGCTTTGATTGTTaGAGATCTACTCCTACTGTG +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRSSFDC*RSTPTV
Trigger: CACAGTAGGAGTAGATCTCCAACAATCAAAGCTAGA...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGTCTAGCTTTGATTGTTaGAGATCTACTCCTACTGTG +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMSSFDC*RSTPTV
Trigger: CACAGTAGGAGTAGATCTCCAACAATCAAAGCTAGA...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTTGATTGTTGGAGATCTACTCCTACTGTGTCTCTTTTTCCTTTTAGGAGAAGATTCTTTGCTACTTCCTaGAGACTCAGAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: FDCWRSTPTVSLFPFRRRFFATS*RLRTAP
Trigger: AGGAGCAGTTCTGAGTCTCCAGGAAGTAGCAAAGAA...TCTTCTCCTAAAAGGAAAAAGAGACACAGTAGGAGTAGATCTCCAACAATCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CCA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCGAAATTTACCTACTTaGTATTACACCACTAGAAAC +
Preference number: 4 (lower is better)
Translates to: ILVSPTQPQCASIMRQALRNLPT*YYTTRN
Trigger: GTTTCTAGTGGTGTAATACCAAGTAGGTAAATTTCG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681615.1
CDS-3UTR TCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACCTTGGAAATTCCCATaGTTGTTTGGACCAGATTCC +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKPWKFP*LFGPDS
Trigger: GGAATCTGGTCCAAACAATCATGGGAATTTCCAAGG...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAGTTGCCACATTCTGTTaGAGTTTGAATCCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKVATFC*SLNPLG
Trigger: TCCAAGGGGATTCAAACTTCAACAGAATGTGGCAAC...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTGTCAGCAACATCATTTaGTACTCTTTCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFVSNII*YSFSSS
Trigger: TGAAGAGGAGAAAGAGTATCAAATGATGTTGCTGAC...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACGTCAGCAACATCATTTaGTACTCTTTCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYVSNII*YSFSSS
Trigger: TGAAGAGGAGAAAGAGTATCAAATGATGTTGCTGAC...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGAAATTTCTTCATCTGTaGCATCCAGCAGAATTTCTG +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMKFLHL*HPAEFL
Trigger: CAGAAATTCTGCTGGATGTCACAGATGAAGAAATTT...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGCTAAGATTTCCACGTTaGTCATCAATTTTACGCCTA +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRLRFPR*SSILRL
Trigger: TAGGCGTAAAATTGATGATCAACGTGGAAATCTTAG...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTAAAAGTATACTACCTTaGTCGGGACTTAGACTTGTG +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFKSILP*SGLRLV
Trigger: CACAAGTCTAAGTCCCGATCAAGGTAGTATACTTTT...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
CDS-3UTR TCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTTCATTTTACAGGAGTaGACCACACGTTATACACAC +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFFILQE*TTRYTH
Trigger: GTGTGTATAACGTGTGGTTCACTCCTGTAAAATGAA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTGTGCACTGGCTTGATTaGTTCCAGCAATTTCATTTT +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFVHWLD*FQQFHF
Trigger: AAAATGAAATTGCTGGAATCAATCAAGCCAGTGCAC...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACGTGCACTGGCTTGATTaGTTCCAGCAATTTCATTTT +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYVHWLD*FQQFHF
Trigger: AAAATGAAATTGCTGGAATCAATCAAGCCAGTGCAC...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCACTGGTGCACTGGCTTaGTTGATTCCAGCAATTTCA +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTTGALA*LIPAIS
Trigger: TGAAATTGCTGGAATCAATCAAGCCAGTGCACCAGT...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp TTTGATTGTTGGAGATCTACTCCTACTGTGTCTCTTTTTCCTTTTAGGAGAAGAATGTTGAGGAAACACTaGTCTTGGCAAAAATCTGGC +
Preference number: 4 (lower is better)
Translates to: FDCWRSTPTVSLFPFRRRMLRKH*SWQKSG
Trigger: GCCAGATTTTTGCCAAGATCAGTGTTTCCTCAACAT...TCTTCTCCTAAAAGGAAAAAGAGACACAGTAGGAGTAGATCTCCAACAATCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR TCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACTTTCTATCTTCATGTTaGGGAAACACTGATCTTGGC +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYFLSSC*GNTDLG
Trigger: GCCAAGATCAGTGTTTCCTCAACATGAAGATAGAAA...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCATGTTCTACCATGCTTTaGTGTCCTGAAGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGACSTML*CPEASL
Trigger: AAGAGAAGCTTCAGGACAGCAAAGCATGGTAGAACA...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAATGTTCTACCATGCTTTaGTGTCCTGAAGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQCSTML*CPEASL
Trigger: AAGAGAAGCTTCAGGACAGCAAAGCATGGTAGAACA...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCGTGGTTGTTCTACCATaGTTTGCTGTCCTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTVVVLP*FAVLKL
Trigger: AAGCTTCAGGACAGCAAAGCATGGTAGAACAACCAC...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TCTCCTTCTATCTCTAATCTTTACCCTAGCCCTATTGCTCTCTATTTTAATTCTGTGGTTGTTCTACCATaGTTTGCTGTCCTGAAGCTT +
Preference number: 4 (lower is better)
Translates to: SPSISNLYPSPIALYFNSVVVLP*FAVLKL
Trigger: AAGCTTCAGGACAGCAAAGCATGGTAGAACAACCAC...AGAATTAAAATAGAGAGCAATAGGGCTAGGGTAAAGATTAGAGATAGAAGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR GCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATAAGCGGGAAGAGTCCTaGGTTTTACTGCGTCAATTT +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYKREES*VLLRQF
Trigger: AAATTGACGCAGTAAAACGCAGGACTCTTCCCGCTT...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTGACTTTCCCACTACTTaGAGCCTCAACATTTTCAGT +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCDFPTT*SLNIFS
Trigger: ACTGAAAATGTTGAGGCTGCAAGTAGTGGGAAAGTC...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAAGACTTTCCCACTACTTaGAGCCTCAACATTTTCAGT +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQDFPTT*SLNIFS
Trigger: ACTGAAAATGTTGAGGCTGCAAGTAGTGGGAAAGTC...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACGTTGCTTTGCGGTGTaGATCTTTGGCTACGTAATA +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKRCFAV*IFGYVI
Trigger: TATTACGTAGCCAAAGATGCACACCGCAAAGCAACG...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTCGTTGCTTTGCGGTGTaGATCTTTGGCTACGTAATA +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFRCFAV*IFGYVI
Trigger: TATTACGTAGCCAAAGATGCACACCGCAAAGCAACG...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTTTTGCCGGATTCGATaGCGTAATTCTTCATCATCA +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFFCRIR*RNSSSS
Trigger: TGATGATGAAGAATTACGGCATCGAATCCGGCAAAA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
39% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGAAATTGACACAAACCTaGATAATACAGCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRKLTQT*IIQHSS
Trigger: GGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTT...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCATATCTTGTCCATTTaGCATCATTCCTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCHILSI*HHSWWL
Trigger: CAACCACCAGGAATGATGCCAAATGGACAAGATATG...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCACATATCTTGTCCATTTaGCATCATTCCTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGAHILSI*HHSWWL
Trigger: CAACCACCAGGAATGATGCCAAATGGACAAGATATG...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGATTCCCATGATTGTTTaGACCAGATTCCATTGTAGA +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMIPMIV*TRFHCR
Trigger: TCTACAATGGAATCTGGTCCAAACAATCATGGGAAT...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGATTCCCATGATTGTTTaGACCAGATTCCATTGTAGA +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRIPMIV*TRFHCR
Trigger: TCTACAATGGAATCTGGTCCAAACAATCATGGGAAT...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTGCAAAATTATCGGGTaGTCCACCAAAGTTGTGATT +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFCKIIG*STKVVI
Trigger: AATCACAACTTTGGTGGACCACCCGATAATTTTGCA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGATTCTTTGCTACTTCCTaGAGACTCAGAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGFFATS*RLRTAP
Trigger: AGGAGCAGTTCTGAGTCTCCAGGAAGTAGCAAAGAA...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTATTCCCTTAATGGTGTaGTTTACCCCCACTCCACAA +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFIPLMV*FTPTPQ
Trigger: TTGTGGAGTGGGGGTAAACCACACCATTAAGGGAAT...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACGGTCCACCAAAGTTGTaGTTGTTCTGGTTAAATATA +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYGPPKL*LFWLNI
Trigger: TATATTTAACCAGAACAATCACAACTTTGGTGGACC...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTGGTCCACCAAAGTTGTaGTTGTTCTGGTTAAATATA +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFGPPKL*LFWLNI
Trigger: TATATTTAACCAGAACAATCACAACTTTGGTGGACC...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTAAATTTCTTCATCTGTaGCATCCAGCAGAATTTCTG +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFKFLHL*HPAEFL
Trigger: CAGAAATTCTGCTGGATGTCACAGATGAAGAAATTT...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACTCACCTTTATGCTTATaGCTGTTCCCACTAAGATTT +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYSPLCL*LFPLRF
Trigger: AAATCTTAGTGGGAACAGTCATAAGCATAAAGGTGA...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTCACCTTTATGCTTATaGCTGTTCCCACTAAGATTT +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFSPLCL*LFPLRF
Trigger: AAATCTTAGTGGGAACAGTCATAAGCATAAAGGTGA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR TCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATTTTCTTTGGGGGAGGTaGGAGAAGGTACCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYFLWGR*EKVPLK
Trigger: TTTTAAAGGTACCTTCTCTCACCTCCCCCAAAGAAA...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTTTCATTTTACAGGAGTaGACCACACGTTATACACAC +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCFILQE*TTRYTH
Trigger: GTGTGTATAACGTGTGGTTCACTCCTGTAAAATGAA...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAATTCATTTTACAGGAGTaGACCACACGTTATACACAC +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQFILQE*TTRYTH
Trigger: GTGTGTATAACGTGTGGTTCACTCCTGTAAAATGAA...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAAGTGCACTGGCTTGATTaGTTCCAGCAATTTCATTTT +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQVHWLD*FQQFHF
Trigger: AAAATGAAATTGCTGGAATCAATCAAGCCAGTGCAC...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATATGTTGAGGAAACACTaGTCTTGGCAAAAATCTGGC +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYMLRKH*SWQKSG
Trigger: GCCAGATTTTTGCCAAGATCAGTGTTTCCTCAACAT...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTATGTTGAGGAAACACTaGTCTTGGCAAAAATCTGGC +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFMLRKH*SWQKSG
Trigger: GCCAGATTTTTGCCAAGATCAGTGTTTCCTCAACAT...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAATGTTGAGGAAACACTaGTCTTGGCAAAAATCTGGC +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKMLRKH*SWQKSG
Trigger: GCCAGATTTTTGCCAAGATCAGTGTTTCCTCAACAT...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAATTTCTATCTTCATGTTaGGGAAACACTGATCTTGGC +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQFLSSC*GNTDLG
Trigger: GCCAAGATCAGTGTTTCCTCAACATGAAGATAGAAA...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTTGTTCTACCATGCTTTaGTGTCCTGAAGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFCSTML*CPEASL
Trigger: AAGAGAAGCTTCAGGACAGCAAAGCATGGTAGAACA...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAAATTCCCCATTCTGGTTaGCACATTCTGTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQIPHSG*HILLKF
Trigger: AAACTTCAACAGAATGTGGCAACCAGAATGGGGAAT...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAGACTTTCCCACTACTTaGAGCCTCAACATTTTCAGT +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKDFPTT*SLNIFS
Trigger: ACTGAAAATGTTGAGGCTGCAAGTAGTGGGAAAGTC...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTTTTTGCCGGATTCGATaGCGTAATTCTTCATCATCA +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCFCRIR*RNSSSS
Trigger: TGATGATGAAGAATTACGGCATCGAATCCGGCAAAA...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAAAAGCTTCCTGTTTTTaGCGGATTCGATGCCGTAAT +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKKASCF*RIRCRN
Trigger: ATTACGGCATCGAATCCGGCAAAAACAGGAAGCTTT...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTAAAGCTTCCTGTTTTTaGCGGATTCGATGCCGTAAT +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFKASCF*RIRCRN
Trigger: ATTACGGCATCGAATCCGGCAAAAACAGGAAGCTTT...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAAAAGCTTCCTGTTTTTaGCGGATTCGATGCCGTAAT +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGKASCF*RIRCRN
Trigger: ATTACGGCATCGAATCCGGCAAAAACAGGAAGCTTT...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGATACACAGCCACAATGTaGCTCTATAATGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGYTATM*LYNETS
Trigger: GCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTA...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCTACACAGCCACAATGTaGCTCTATAATGAGACAAGC +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTYTATM*LYNETS
Trigger: GCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTA...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTAAATTGACACAAACCTaGATAATACAGCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFKLTQT*IIQHSS
Trigger: GGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTT...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAATTTGGCATCATTCCTaGTGGTTGTTCTACCATGCT +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKIWHHS*WLFYHA
Trigger: AGCATGGTAGAACAACCACCAGGAATGATGCCAAAT...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATATTTGGCATCATTCCTaGTGGTTGTTCTACCATGCT +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYIWHHS*WLFYHA
Trigger: AGCATGGTAGAACAACCACCAGGAATGATGCCAAAT...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTATTTGGCATCATTCCTaGTGGTTGTTCTACCATGCT +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFIWHHS*WLFYHA
Trigger: AGCATGGTAGAACAACCACCAGGAATGATGCCAAAT...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCATATCTTGTCCATTTaGCATCATTCCTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTHILSI*HHSWWL
Trigger: CAACCACCAGGAATGATGCCAAATGGACAAGATATG...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGACATATCTTGTCCATTTaGCATCATTCCTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGHILSI*HHSWWL
Trigger: CAACCACCAGGAATGATGCCAAATGGACAAGATATG...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTATTCCCATGATTGTTTaGACCAGATTCCATTGTAGA +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFIPMIV*TRFHCR
Trigger: TCTACAATGGAATCTGGTCCAAACAATCATGGGAAT...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATGCATTCCCCATTCTaGTTGCCACATTCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGMHSPF*LPHSVE
Trigger: TTCAACAGAATGTGGCAACCAGAATGGGGAATGCAT...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCATGCATTCCCCATTCTaGTTGCCACATTCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTMHSPF*LPHSVE
Trigger: TTCAACAGAATGTGGCAACCAGAATGGGGAATGCAT...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTATGCATTCCCCATTCTaGTTGCCACATTCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFMHSPF*LPHSVE
Trigger: TTCAACAGAATGTGGCAACCAGAATGGGGAATGCAT...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCATGCAAAATTATCGGGTaGTCCACCAAAGTTGTGATT +
Preference number: 4 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGACKIIG*STKVVI
Trigger: AATCACAACTTTGGTGGACCACCCGATAATTTTGCA...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTTGCAAAATTATCGGGTaGTCCACCAAAGTTGTGATT +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCCKIIG*STKVVI
Trigger: AATCACAACTTTGGTGGACCACCCGATAATTTTGCA...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTGCGGTGTGCATCTTTaGCTACGTAATAAATTTCTT +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFCGVHL*LRNKFL
Trigger: AAGAAATTTATTACGTAGCCAAAGATGCACACCGCA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGAACTTGGAGCAGCATTaGAAAAAGTACACCTATTTA +
Preference number: 4 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMNLEQH*KKYTYL
Trigger: TAAATAGGTGTACTTTTTCCAATGCTGCTCCAAGTT...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCTGGCAAAAGTCCATaGGTACAATTTACAAACTTT +
Preference number: 4 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRSGKSP*VQFTNF
Trigger: AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGA...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAGTCAGCAACATCATTTaGTACTCTTTCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGVSNII*YSFSSS
Trigger: TGAAGAGGAGAAAGAGTATCAAATGATGTTGCTGAC...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTGTCAGCAACATCATTTaGTACTCTTTCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFVSNII*YSFSSS
Trigger: TGAAGAGGAGAAAGAGTATCAAATGATGTTGCTGAC...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTAAATTTCTTCATCTGTaGCATCCAGCAGAATTTCTG +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCKFLHL*HPAEFL
Trigger: CAGAAATTCTGCTGGATGTCACAGATGAAGAAATTT...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTAAAAGTATACTACCTTaGTCGGGACTTAGACTTGTG +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFKSILP*SGLRLV
Trigger: CACAAGTCTAAGTCCCGATCAAGGTAGTATACTTTT...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
CDS-3UTR TCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAAAAAGTATACTACCTTaGTCGGGACTTAGACTTGTG +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKKSILP*SGLRLV
Trigger: CACAAGTCTAAGTCCCGATCAAGGTAGTATACTTTT...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
CDS-3UTR TCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCTTCATTTTACAGGAGTaGACCACACGTTATACACAC +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTFILQE*TTRYTH
Trigger: GTGTGTATAACGTGTGGTTCACTCCTGTAAAATGAA...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTTTCATTTTACAGGAGTaGACCACACGTTATACACAC +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFFILQE*TTRYTH
Trigger: GTGTGTATAACGTGTGGTTCACTCCTGTAAAATGAA...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAGTGCACTGGCTTGATTaGTTCCAGCAATTTCATTTT +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGVHWLD*FQQFHF
Trigger: AAAATGAAATTGCTGGAATCAATCAAGCCAGTGCAC...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATTTTCTATCTTCATGTTaGGGAAACACTGATCTTGGC +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYFLSSC*GNTDLG
Trigger: GCCAAGATCAGTGTTTCCTCAACATGAAGATAGAAA...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATTCCCCATTCTGGTTaGCACATTCTGTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGIPHSG*HILLKF
Trigger: AAACTTCAACAGAATGTGGCAACCAGAATGGGGAAT...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTTGCAAAATTATCGGGTaGTCCACCAAAGTTGTGATT +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFCKIIG*STKVVI
Trigger: AATCACAACTTTGGTGGACCACCCGATAATTTTGCA...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCTGCAAAATTATCGGGTaGTCCACCAAAGTTGTGATT +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTCKIIG*STKVVI
Trigger: AATCACAACTTTGGTGGACCACCCGATAATTTTGCA...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTTCTAGCTTTGATTGTTaGAGATCTACTCCTACTGTG +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFSSFDC*RSTPTV
Trigger: CACAGTAGGAGTAGATCTCCAACAATCAAAGCTAGA...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGATCTAGCTTTGATTGTTaGAGATCTACTCCTACTGTG +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGSSFDC*RSTPTV
Trigger: CACAGTAGGAGTAGATCTCCAACAATCAAAGCTAGA...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTAACTTGGAGCAGCATTaGAAAAAGTACACCTATTTA +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFNLEQH*KKYTYL
Trigger: TAAATAGGTGTACTTTTTCCAATGCTGCTCCAAGTT...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAACTTGGAGCAGCATTaGAAAAAGTACACCTATTTA +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYNLEQH*KKYTYL
Trigger: TAAATAGGTGTACTTTTTCCAATGCTGCTCCAAGTT...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTCTTCTAAAACAGAAGTaGGTGACTGTAGAATATAGT +
Preference number: 4 (lower is better)
Translates to: QPQCASIMRQALKTHGIFLLKQK*VTVEYS
Trigger: ACTATATTCTACAGTCACCCACTTCTGTTTTAGAAG...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACCTTCTAAAACAGAAGTaGGTGACTGTAGAATATAGT +
Preference number: 4 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYLLKQK*VTVEYS
Trigger: ACTATATTCTACAGTCACCCACTTCTGTTTTAGAAG...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTGGTCCACCAAAGTTGTaGTTGTTCTGGTTAAATATA +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFGPPKL*LFWLNI
Trigger: TATATTTAACCAGAACAATCACAACTTTGGTGGACC...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATGGTCCACCAAAGTTGTaGTTGTTCTGGTTAAATATA +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYGPPKL*LFWLNI
Trigger: TATATTTAACCAGAACAATCACAACTTTGGTGGACC...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCGGTCCACCAAAGTTGTaGTTGTTCTGGTTAAATATA +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTGPPKL*LFWLNI
Trigger: TATATTTAACCAGAACAATCACAACTTTGGTGGACC...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTAAATTTCTTCATCTGTaGCATCCAGCAGAATTTCTG +
Preference number: 4 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFKFLHL*HPAEFL
Trigger: CAGAAATTCTGCTGGATGTCACAGATGAAGAAATTT...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR TCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGACTAAGATTTCCACGTTaGTCATCAATTTTACGCCTA +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGLRFPR*SSILRL
Trigger: TAGGCGTAAAATTGATGATCAACGTGGAAATCTTAG...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR TCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTAAGATTTCCACGTTaGTCATCAATTTTACGCCTA +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTLRFPR*SSILRL
Trigger: TAGGCGTAAAATTGATGATCAACGTGGAAATCTTAG...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR TCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATCTAAGATTTCCACGTTaGTCATCAATTTTACGCCTA +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYLRFPR*SSILRL
Trigger: TAGGCGTAAAATTGATGATCAACGTGGAAATCTTAG...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR TCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAATCACCTTTATGCTTATaGCTGTTCCCACTAAGATTT +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKSPLCL*LFPLRF
Trigger: AAATCTTAGTGGGAACAGTCATAAGCATAAAGGTGA...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR TCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCTCACCTTTATGCTTATaGCTGTTCCCACTAAGATTT +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTSPLCL*LFPLRF
Trigger: AAATCTTAGTGGGAACAGTCATAAGCATAAAGGTGA...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAAAATTGACACAAACCTaGATAATACAGCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGKLTQT*IIQHSS
Trigger: GGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTT...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAACTTGTAAGTTATCAATaGCTTAAACTGTTAGACCAC +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQLVSYQ*LKLLDH
Trigger: GTGGTCTAACAGTTTAAGGCATTGATAACTTACAAG...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCATTCCCATGATTGTTTaGACCAGATTCCATTGTAGA +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTIPMIV*TRFHCR
Trigger: TCTACAATGGAATCTGGTCCAAACAATCATGGGAAT...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAATTCCCATGATTGTTTaGACCAGATTCCATTGTAGA +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKIPMIV*TRFHCR
Trigger: TCTACAATGGAATCTGGTCCAAACAATCATGGGAAT...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAATGCGGTGTGCATCTTTaGCTACGTAATAAATTTCTT +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKCGVHL*LRNKFL
Trigger: AAGAAATTTATTACGTAGCCAAAGATGCACACCGCA...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TCTCCTTCTATCTCTAATCTTTACCCTAGCCCTATTGCTCTCTATTTTAATTCTTGCGGTGTGCATCTTTaGCTACGTAATAAATTTCTT +
Preference number: 4 (lower is better)
Translates to: SPSISNLYPSPIALYFNSCGVHL*LRNKFL
Trigger: AAGAAATTTATTACGTAGCCAAAGATGCACACCGCA...AGAATTAAAATAGAGAGCAATAGGGCTAGGGTAAAGATTAGAGATAGAAGGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGATGCGGTGTGCATCTTTaGCTACGTAATAAATTTCTT +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGCGVHL*LRNKFL
Trigger: AAGAAATTTATTACGTAGCCAAAGATGCACACCGCA...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTGTTCTAAAACTGATGTaGTTTCATTTGGAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCVLKLM*FHLEFS
Trigger: AGAGAACTCCAAATGAAACCACATCAGTTTTAGAAC...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TCTATCTCTAATCTTTACCCTAGCCCTATTGCTCTCTATTTTAATTCTGCGAGAGTTCTAAAACTGATGTaGTTTCATTTGGAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: SISNLYPSPIALYFNSARVLKLM*FHLEFS
Trigger: AGAGAACTCCAAATGAAACCACATCAGTTTTAGAAC...TCTCGCAGAATTAAAATAGAGAGCAATAGGGCTAGGGTAAAGATTAGAGATAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CCA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAAAACTTGGAGCAGCATTaGAAAAAGTACACCTATTTA +
Preference number: 4 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQNLEQH*KKYTYL
Trigger: TAAATAGGTGTACTTTTTCCAATGCTGCTCCAAGTT...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTTCTGGCAAAAGTCCATaGGTACAATTTACAAACTTT +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCSGKSP*VQFTNF
Trigger: AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGA...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCTTCTAAAACAGAAGTaGGTGACTGTAGAATATAGT +
Preference number: 4 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCLLKQK*VTVEYS
Trigger: ACTATATTCTACAGTCACCCACTTCTGTTTTAGAAG...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
3UTR CAA 72 bp AACTGTCAAATACTACTTTTGGCTCTAGTTCATAACTaGCCCAAAAATGTGCATATCATAGCCAACAGAATT +
Preference number: 4 (lower is better)
Translates to: NCQILLLALVHN*PKNVHIIANRI
Trigger: AATTCTGTTGGCTATGATATGCACATTTTTGGGCAAGTTATGAACTAGAGCCAAAAGTAGTATTTGACAGTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR GCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGACTTGTAAGTTATCAATaGCTTAAACTGTTAGACCAC +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGLVSYQ*LKLLDH
Trigger: GTGGTCTAACAGTTTAAGGCATTGATAACTTACAAG...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTGTAAGTTATCAATaGCTTAAACTGTTAGACCAC +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKLVSYQ*LKLLDH
Trigger: GTGGTCTAACAGTTTAAGGCATTGATAACTTACAAG...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR GCA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTGTAAGTTATCAATaGCTTAAACTGTTAGACCAC +
Preference number: 4 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTLVSYQ*LKLLDH
Trigger: GTGGTCTAACAGTTTAAGGCATTGATAACTTACAAG...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATGTTCTAAAACTGATGTaGTTTCATTTGGAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYVLKLM*FHLEFS
Trigger: AGAGAACTCCAAATGAAACCACATCAGTTTTAGAAC...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAGTTCTAAAACTGATGTaGTTTCATTTGGAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKVLKLM*FHLEFS
Trigger: AGAGAACTCCAAATGAAACCACATCAGTTTTAGAAC...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CCA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAATCTGGCAAAAGTCCATaGGTACAATTTACAAACTTT +
Preference number: 4 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKSGKSP*VQFTNF
Trigger: AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGA...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CCA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGACTTCTAAAACAGAAGTaGGTGACTGTAGAATATAGT +
Preference number: 4 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGLLKQK*VTVEYS
Trigger: ACTATATTCTACAGTCACCCACTTCTGTTTTAGAAG...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS GCA 90 bp GCAGCCCAATCAATCTGGCTTGGATCCTGTTGGTGCTGGAATGACTaGATCCATTGTTGCTGGTTCAAGGGCCACTGCTGCCAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: AAQSIWLGSCWCWND*IHCCWFKGHCCQGC
Trigger: ACAGCCTTGGCAGCAGTGGCCCTTGAACCAGCAACAATGGATGCAGTCATTCCAGCACCAACAGGATCCAAGCCAGATTGATTGGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000466057.1
ENST00000478777.5
ENST00000492294.5
ENST00000498075.1
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS GCA 90 bp ACCCTTGTCGCCGCCGTTCCGGTAACACCTCTCCAACGCTTTCGATaGTTCTACTTCTTCGGGAACAAGACAAGATGGCGCCCGATTTGT +
Preference number: 5 (lower is better)
Translates to: TLVAAVPVTPLQRFR*FYFFGNKTRWRPIC
Trigger: ACAAATCGGGCGCCATCTTGTCTTGTTCCCGAAGAAGTAGAAGCATCGAAAGCGTTGGAGAGGTGTTACCGGAACGGCGGCGACAAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000438806.5
ENST00000681615.1
CDS TCA 90 bp CAATGCAGCCCAATCAATCTGGCTTGGATCCTGTTGGTGCTGGAATaGCTGCATCCATTGTTGCTGGTTCAAGGGCCACTGCTGCCAAGG +
Preference number: 5 (lower is better)
Translates to: QCSPINLAWILLVLE*LHPLLLVQGPLLPR
Trigger: CCTTGGCAGCAGTGGCCCTTGAACCAGCAACAATGGATGCAGTCATTCCAGCACCAACAGGATCCAAGCCAGATTGATTGGGCTGCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000466057.1
ENST00000478777.5
ENST00000492294.5
ENST00000498075.1
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS GCA 90 bp GCCAGAGGTTGCAATAGAGAGACAAAGAATGCTCTCTTCCCTAGATaGCAAGTGAGGTTTCCAGAGTGTTCCCAGCCCCTGTCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: ARGCNRETKNALFPR*QVRFPECSQPLSAW
Trigger: CCAGGCTGACAGGGGCTGGGAACACTCTGGAAACCTCACTTGGCATCTAGGGAAGAGAGCATTCTTTGTCTCTCTATTGCAACCTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498075.1
CDS TCA 90 bp GTTGCAATAGAGAGACAAAGAATGCTCTCTTCCCTAGATGCCAAGTaGGGTTTCCAGAGTGTTCCCAGCCCCTGTCAGCCTGGTTGCCAC +
Preference number: 5 (lower is better)
Translates to: VAIERQRMLSSLDAK*GFQSVPSPCQPGCH
Trigger: GTGGCAACCAGGCTGACAGGGGCTGGGAACACTCTGGAAACCTCACTTGGCATCTAGGGAAGAGAGCATTCTTTGTCTCTCTATTGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498075.1
CDS GCA 90 bp CCAATGCAGCCCAATCAATTTGGATCCTGTTGGTGCTGGAATGACTaGATCCATTGTTGCTGGTTCAAGGGCCACTGCTGCCAAGGCTGT +
Preference number: 5 (lower is better)
Translates to: PMQPNQFGSCWCWND*IHCCWFKGHCCQGC
Trigger: ACAGCCTTGGCAGCAGTGGCCCTTGAACCAGCAACAATGGATGCAGTCATTCCAGCACCAACAGGATCCAAATTGATTGGGCTGCATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481229.2
CDS CCA 90 bp ACCATGCTTTGCTGTCCTGAAGCTTCTCTTTGGGCAATCCAAGCTTaGGCCAATGCAGCCCAATCAATCTGGCTTGGATCCTGTTGGTGC +
Preference number: 5 (lower is better)
Translates to: TMLCCPEASLWAIQA*ANAAQSIWLGSCWC
Trigger: GCACCAACAGGATCCAAGCCAGATTGATTGGGCTGCATTGGCCCAAGCTTGGATTGCCCAAAGAGAAGCTTCAGGACAGCAAAGCATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000466057.1
ENST00000478777.5
ENST00000492294.5
ENST00000498075.1
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS CCA 90 bp TGGAGGTCCTGGTTGCCAATAAGGAGGATGAAATCCACCTTGCGGTaGACCAAAAGCAGCCCCATGCTGATAGTCAAACTGGTTCACTGG +
Preference number: 5 (lower is better)
Translates to: WRSWLPIRRMKSTLR*TKSSPMLIVKLVHW
Trigger: CCAGTGAACCAGTTTGACTATCAGCATGGGGCTGCTTTTGGTCCACCGCAAGGTGGATTTCATCCTCCTTATTGGCAACCAGGACCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000478777.5
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS CCA 90 bp CCTGGTGGTTGTTCTACCATGCTTTGCTGTCCTGAAGCTTCTCTTTaGGCAATCCAAGCTTGGGCCAATGCAGCCCAATCAATCTGGCTT +
Preference number: 5 (lower is better)
Translates to: PGGCSTMLCCPEASL*AIQAWANAAQSIWL
Trigger: AAGCCAGATTGATTGGGCTGCATTGGCCCAAGCTTGGATTGCCCAAAGAGAAGCTTCAGGACAGCAAAGCATGGTAGAACAACCACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000466057.1
ENST00000478777.5
ENST00000492294.5
ENST00000498075.1
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS TCA 90 bp ATTTGGCATCATTCCTGGTGGTTGTTCTACCATGCTTTGCTGTCCTaGAGCTTCTCTTTGGGCAATCCAAGCTTGGGCCAATGCAGCCCA +
Preference number: 5 (lower is better)
Translates to: IWHHSWWLFYHALLS*SFSLGNPSLGQCSP
Trigger: TGGGCTGCATTGGCCCAAGCTTGGATTGCCCAAAGAGAAGCTTCAGGACAGCAAAGCATGGTAGAACAACCACCAGGAATGATGCCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000466057.1
ENST00000478777.5
ENST00000481229.2
ENST00000492294.5
ENST00000498075.1
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS TCA 90 bp ATTTGTGGAGGCTCCTGCTTCACAGGAAGTGCAATAGGTGAACGCTaGCGATCCCTGAATGATGATGGCCTTTCTCTTCGATTCTGGGGA +
Preference number: 5 (lower is better)
Translates to: ICGGSCFTGSAIGER*RSLNDDGLSLRFWG
Trigger: TCCCCAGAATCGAAGAGAAAGGCCATCATCATTCAGGGATCGTCAGCGTTCACCTATTGCACTTCCTGTGAAGCAGGAGCCTCCACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000463021.1
ENST00000478777.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS GCA 90 bp ATATATGCCTGTTGTCAGGGGCAAATTCCCCACTGTCCTGACTGTTaGTGTCTTCAGAAGGAGGAACAATGTCCATTGGGCCTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: IYACCQGQIPHCPDC*CLQKEEQCPLGLVL
Trigger: CAACACCAGGCCCAATGGACATTGTTCCTCCTTCTGAAGACAGCAACAGTCAGGACAGTGGGGAATTTGCCCCTGACAACAGGCATATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000463021.1
ENST00000478777.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS GCA 90 bp GAGGTCCTGGAGGTCCTGATAGTCAAACTGGTTCACTGGCCCCACTaGAAAATTATCGGGTGGTCCACCAAAGTTGTGATTGTTCTGGTT +
Preference number: 5 (lower is better)
Translates to: EVLEVLIVKLVHWPH*KIIGWSTKVVIVLV
Trigger: AACCAGAACAATCACAACTTTGGTGGACCACCCGATAATTTTGCAGTGGGGCCAGTGAACCAGTTTGACTATCAGGACCTCCAGGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS CCA 90 bp ACCATGCTTTGCTGTCCTGAAGCTTCTCTTTGGGCAATCCAAGCTTaGGCCAATGCAGCCCAATCAATTTGGATCCTGTTGGTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: TMLCCPEASLWAIQA*ANAAQSIWILLVLE
Trigger: TTCCAGCACCAACAGGATCCAAATTGATTGGGCTGCATTGGCCCAAGCTTGGATTGCCCAAAGAGAAGCTTCAGGACAGCAAAGCATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481229.2
CDS CCA 90 bp CCTGGTGGTTGTTCTACCATGCTTTGCTGTCCTGAAGCTTCTCTTTaGGCAATCCAAGCTTGGGCCAATGCAGCCCAATCAATTTGGATC +
Preference number: 5 (lower is better)
Translates to: PGGCSTMLCCPEASL*AIQAWANAAQSIWI
Trigger: GATCCAAATTGATTGGGCTGCATTGGCCCAAGCTTGGATTGCCCAAAGAGAAGCTTCAGGACAGCAAAGCATGGTAGAACAACCACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481229.2
CDS-3UTR CAA 90 bp ATCTTATGGGACCACTGTTGTACATGTGGCCCGTCATTGACTGAAACGTCGTTATACGACGGGGAGGGGTaGTTGATCTTGATCGGGACT +
Preference number: 5 (lower is better)
Translates to: ILWDHCCTCGPSLTETSLYDGEG*LILIGT
Trigger: AGTCCCGATCAAGATCAACAACCCCTCCCCGTCGTA...TAACGACGTTTCAGTCAATGACGGGCCACATGTACAACAGTGGTCCCATAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681615.1
CDS TCA 90 bp GTTGCAATAGAGAGACAAAGAATGCTCTCTTCCCTAGATGCCAAGTaGGGTTTCCAGAGTGTTCCCAGCCCCTGTCAGCCTAGGAATGAA +
Preference number: 5 (lower is better)
Translates to: VAIERQRMLSSLDAK*GFQSVPSPCQPRNE
Trigger: TTCATTCCTAGGCTGACAGGGGCTGGGAACACTCTGGAAACCTCACTTGGCATCTAGGGAAGAGAGCATTCTTTGTCTCTCTATTGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466057.1
CDS-3UTR CAA 90 bp ATCTTATGGGACCACTGTTGTACATGTGGCCCGTCATTGACTGAAACGTCGTTAGTCACTGTGCTCTTCTaGAGGAACTGGGGATGGACT +
Preference number: 5 (lower is better)
Translates to: ILWDHCCTCGPSLTETSLVTVLF*RNWGWT
Trigger: AGTCCATCCCCAGTTCCTCAAGAAGAGCACAGTGAC...TAACGACGTTTCAGTCAATGACGGGCCACATGTACAACAGTGGTCCCATAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681615.1
CDS-3UTR CAA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCTGCGACTGGCACGATaGGTTCGTCTATCCCTTGAG +
Preference number: 5 (lower is better)
Translates to: ILVSPTQPQCASIMRQALLRLAR*VRLSLE
Trigger: CTCAAGGGATAGACGAACCAATCGTGCCAGTCGCAG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS TCA 90 bp TGGTTAAATATATGCCTGTTGTCAGGGGCAAATTCCCCACTGTCCTaGCTGTTGCTGTCTTCAGAAGGAGGAACAATGTCCATTGGGCCT +
Preference number: 5 (lower is better)
Translates to: WLNICLLSGANSPLS*LLLSSEGGTMSIGP
Trigger: AGGCCCAATGGACATTGTTCCTCCTTCTGAAGACAGCAACAGTCAGGACAGTGGGGAATTTGCCCCTGACAACAGGCATATATTTAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000463021.1
ENST00000478777.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS TCA 90 bp TGTTCCCAGCCCCTGTCAGCCTGGTTGCCACATTCTGTTGAAGTTTaGATCCCCTTGGAAATTCCCATGATTGTTTGGACCAGATTCCAT +
Preference number: 5 (lower is better)
Translates to: CSQPLSAWLPHSVEV*IPLEIPMIVWTRFH
Trigger: ATGGAATCTGGTCCAAACAATCATGGGAATTTCCAAGGGGATTCAAACTTCAACAGAATGTGGCAACCAGGCTGACAGGGGCTGGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498075.1
CDS GCA 90 bp TCTTGTCCATTTGGCATCATTCCTGGTGGTTGTTCTACCATGCTTTaGTGTCCTGAAGCTTCTCTTTGGGCAATCCAAGCTTGGGCCAAT +
Preference number: 5 (lower is better)
Translates to: SCPFGIIPGGCSTML*CPEASLWAIQAWAN
Trigger: ATTGGCCCAAGCTTGGATTGCCCAAAGAGAAGCTTCAGGACAGCAAAGCATGGTAGAACAACCACCAGGAATGATGCCAAATGGACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000466057.1
ENST00000478777.5
ENST00000481229.2
ENST00000492294.5
ENST00000498075.1
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS GCA 90 bp TCACAAATATGGAAAACACTTACCGAGTCCAGTGAGGGAAGCCAGTaGACTGGACTGTGCCAGCTGTTTTGCAGGAGCTTTGTATCACAT +
Preference number: 5 (lower is better)
Translates to: SQIWKTLTESSEGSQ*TGLCQLFCRSFVSH
Trigger: ATGTGATACAAAGCTCCTGCAAAACAGCTGGCACAGTCCAGTGCACTGGCTTCCCTCACTGGACTCGGTAAGTGTTTTCCATATTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460600.1
CDS CCA 90 bp GCTTTTCTAGGCCAGCTGCCAATACAGCTCTTTGTCTTGTTTACATaGGATCTACCATGCAAAAGTAGGGTAAGCAGATGCTCCCTGCCA +
Preference number: 5 (lower is better)
Translates to: AFLGQLPIQLFVLFT*DLPCKSRVSRCSLP
Trigger: TGGCAGGGAGCATCTGCTTACCCTACTTTTGCATGGTAGATCCCATGTAAACAAGACAAAGAGCTGTATTGGCAGCTGGCCTAGAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463021.1
CDS CCA 90 bp TGGAGGTCCTGGTTGCCAATAAGGAGGATGAAATCCACCTTGCGGTaGACCAAAAGCAGCCCCATGCTGAAAGAGTATTGCAGTTTATTT +
Preference number: 5 (lower is better)
Translates to: WRSWLPIRRMKSTLR*TKSSPMLKEYCSLF
Trigger: AAATAAACTGCAATACTCTTTCAGCATGGGGCTGCTTTTGGTCCACCGCAAGGTGGATTTCATCCTCCTTATTGGCAACCAGGACCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463021.1
CDS-3UTR CAA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCCCAATCAATCTGGCTaGGATCCTGTTGGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: ILVSPTQPQCASIMRQALPNQSG*DPVGAG
Trigger: TCCAGCACCAACAGGATCCAAGCCAGATTGATTGGG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAGGATGAAATCCACCTaGCGGTGGACCAAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: ILVSPTQPQCASIMRQALRMKST*RWTKSS
Trigger: GCTGCTTTTGGTCCACCGCAAGGTGGATTTCATCCT...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TCTGCTATTGCTACTGGAACTACCACTACTAGAACTTCCCGACCTACTCCTTCCTTTTACTGCGTCAATTaGTGGAGGCTCCTGCTTCAC +
Preference number: 5 (lower is better)
Translates to: SAIATGTTTTRTSRPTPSFYCVN*WRLLLH
Trigger: GTGAAGCAGGAGCCTCCACAAATTGACGCAGTAAAA...GGAAGGAGTAGGTCGGGAAGTTCTAGTAGTGGTAGTTCCAGTAGCAATAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CAA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTGGAGCTTTCGTTGCTTaGCGGTGTGCATCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: ILVSPTQPQCASIMRQALGAFVA*RCASLA
Trigger: AGCCAAAGATGCACACCGCAAAGCAACGAAAGCTCC...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS GCA 90 bp GACATGTTTTACTCTGCCAGTGCTGCTTCTGAAAAGGCCAGAGGTTaGAATAGAGAGACAAAGAATGCTCTCTTCCCTAGATGCCAAGTG +
Preference number: 5 (lower is better)
Translates to: DMFYSASAASEKARG*NRETKNALFPRCQV
Trigger: CACTTGGCATCTAGGGAAGAGAGCATTCTTTGTCTCTCTATTGCAACCTCTGGCCTTTTCAGAAGCAGCACTGGCAGAGTAAAACATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000466057.1
ENST00000498075.1
CDS-3UTR CAA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGGAGGAACAATGTCCATaGGGCCTGGTGTTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLREEQCP*GLVLVA
Trigger: TGCCACCAACACCAGGCCCAATGGACATTGTTCCTC...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTTGCAGGAGCTTTCGTaGCTTTGCGGTGTGCATCTT +
Preference number: 5 (lower is better)
Translates to: ILVSPTQPQCASIMRQALLQELS*LCGVHL
Trigger: AAGATGCACACCGCAAAGCAACGAAAGCTCCTGCAA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGCTGCGACTGGCACGATaGGTTCGTCTATCCCTTGAG +
Preference number: 5 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMLRLAR*VRLSLE
Trigger: CTCAAGGGATAGACGAACCAATCGTGCCAGTCGCAG...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGCCCAATCAATCTGGCTaGGATCCTGTTGGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRPNQSG*DPVGAG
Trigger: TCCAGCACCAACAGGATCCAAGCCAGATTGATTGGG...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TCTACTCCTGCTACGTCTAGCTTTGATTGTTGGAGATCTACTCCTACTGTGTCTGGTTGCCACATTCTGTaGAAGTTTGAATCCCCTTGG +
Preference number: 5 (lower is better)
Translates to: STPATSSFDCWRSTPTVSGCHIL*KFESPW
Trigger: CCAAGGGGATTCAAACTTCAACAGAATGTGGCAACC...AGACACAGTAGGAGTAGATCTCCAACAATCAAAGCTAGACGTAGCAGGAGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTGAGGAACAATGTCCATaGGGCCTGGTGTTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: QPQCASIMRQALKTHGIFEEQCP*GLVLVA
Trigger: TGCCACCAACACCAGGCCCAATGGACATTGTTCCTC...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGAGGATGAAATCCACCTaGCGGTGGACCAAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMRMKST*RWTKSS
Trigger: GCTGCTTTTGGTCCACCGCAAGGTGGATTTCATCCT...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGGGAGCTTTCGTTGCTTaGCGGTGTGCATCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRGAFVA*RCASLA
Trigger: AGCCAAAGATGCACACCGCAAAGCAACGAAAGCTCC...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTGGTTCGTCTATCCCTaGAGCGACTTCTACTTCTAC +
Preference number: 5 (lower is better)
Translates to: ILVSPTQPQCASIMRQALWFVYP*SDFYFY
Trigger: GTAGAAGTAGAAGTCGCTCAAGGGATAGACGAACCA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTCTGCGACTGGCACGATaGGTTCGTCTATCCCTTGAG +
Preference number: 5 (lower is better)
Translates to: QPQCASIMRQALKTHGIFLRLAR*VRLSLE
Trigger: CTCAAGGGATAGACGAACCAATCGTGCCAGTCGCAG...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GCTATTGCTACTGGAACTACCACTACTAGAACTTCCCGACCTACTCCTTCCTTGTTAGCCTTCTTTTCTTaGCTACTTCCTGGAGACTCA +
Preference number: 5 (lower is better)
Translates to: AIATGTTTTRTSRPTPSLLAFFS*LLPGDS
Trigger: TGAGTCTCCAGGAAGTAGCAAAGAAAAGAAGGCTAA...CAAGGAAGGAGTAGGTCGGGAAGTTCTAGTAGTGGTAGTTCCAGTAGCAATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CAA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCTTCTTACCAGACCTTaGAGATTTCTCCACGGATCG +
Preference number: 5 (lower is better)
Translates to: ILVSPTQPQCASIMRQALLLTRP*RFLHGS
Trigger: CGATCCGTGGAGAAATCTCAAAGGTCTGGTAAGAAG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTACTTGTGTTTGCGGCTaGCCTTCTTACCAGACCTTT +
Preference number: 5 (lower is better)
Translates to: ILVSPTQPQCASIMRQALTCVCG*PSYQTF
Trigger: AAAGGTCTGGTAAGAAGGCAAGCCGCAAACACAAGT...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GGAACTGGGGATGGACTTCTGGTGACTTTCCCACTACTTGCAGCCTCAACATTTTTCATACCCTTAAAGTaGGAATCTGGCAAAAGTCCA +
Preference number: 5 (lower is better)
Translates to: GTGDGLLVTFPLLAASTFFIPLK*ESGKSP
Trigger: TGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAA...AAATGTTGAGGCTGCAAGTAGTGGGAAAGTCACCAGAAGTCCATCCCCAGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CAA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAATTGGGCAATCCAAGCTaGGGCCAATGCAGCCCAATC +
Preference number: 5 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQLGNPS*GQCSPI
Trigger: GATTGGGCTGCATTGGCCCAAGCTTGGATTGCCCAA...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCATTCCCCATTCTGGTaGCCACATTCTGTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: ILVSPTQPQCASIMRQALHSPFW*PHSVEV
Trigger: AACTTCAACAGAATGTGGCAACCAGAATGGGGAATG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTGAGGAACAATGTCCATaGGGCCTGGTGTTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCEEQCP*GLVLVA
Trigger: TGCCACCAACACCAGGCCCAATGGACATTGTTCCTC...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCAGAGGAACAATGTCCATaGGGCCTGGTGTTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGAEEQCP*GLVLVA
Trigger: TGCCACCAACACCAGGCCCAATGGACATTGTTCCTC...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTGTCACTGTGCTCTTCTaGAGGAACTGGGGATGGACT +
Preference number: 5 (lower is better)
Translates to: QPQCASIMRQALKTHGIFVTVLF*RNWGWT
Trigger: AGTCCATCCCCAGTTCCTCAAGAAGAGCACAGTGAC...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GCTATTGCTACTGGAACTACCACTACTAGAACTTCCCGACCTACTCCTTCCTTGTGTCAGCAACATCATTaGATACTCTTTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: AIATGTTTTRTSRPTPSLCQQHH*ILFLLF
Trigger: GAAGAGGAGAAAGAGTATCAAATGATGTTGCTGACA...CAAGGAAGGAGTAGGTCGGGAAGTTCTAGTAGTGGTAGTTCCAGTAGCAATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CAA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACGGAGCTTTCGTTGCTTaGCGGTGTGCATCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYGAFVA*RCASLA
Trigger: AGCCAAAGATGCACACCGCAAAGCAACGAAAGCTCC...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGTTGCAGGAGCTTTCGTaGCTTTGCGGTGTGCATCTT +
Preference number: 5 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMLQELS*LCGVHL
Trigger: AAGATGCACACCGCAAAGCAACGAAAGCTCCTGCAA...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCACCGTCTGCTTCTCTaGCTTCTAGTAGTGATAAAC +
Preference number: 5 (lower is better)
Translates to: ILVSPTQPQCASIMRQALHRLLL*LLVVIN
Trigger: GTTTATCACTACTAGAAGCAAGAGAAGCAGACGGTG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GCGAGAATAGCTTCTACTCCTGCTACGTCTAGCTTTGATTGTTGGAGATCTACTCACCGTCTGCTTCTCTaGCTTCTAGTAGTGATAAAC +
Preference number: 5 (lower is better)
Translates to: ARIASTPATSSFDCWRSTHRLLL*LLVVIN
Trigger: GTTTATCACTACTAGAAGCAAGAGAAGCAGACGGTG...AGTAGATCTCCAACAATCAAAGCTAGACGTAGCAGGAGTAGAAGCTATTCTCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CAA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCTGCTACGTCTAGCTTaGATTGTTGGAGATCTACTC +
Preference number: 5 (lower is better)
Translates to: ILVSPTQPQCASIMRQALLLRLA*IVGDLL
Trigger: GAGTAGATCTCCAACAATCAAAGCTAGACGTAGCAG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAACTGCGACTGGCACGATaGGTTCGTCTATCCCTTGAG +
Preference number: 5 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQLRLAR*VRLSLE
Trigger: CTCAAGGGATAGACGAACCAATCGTGCCAGTCGCAG...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTGATCGGGACTTAGACTaGTGTTTGCGGCTTGCCTTC +
Preference number: 5 (lower is better)
Translates to: QPQCASIMRQALKTHGIFDRDLD*CLRLAF
Trigger: GAAGGCAAGCCGCAAACACAAGTCTAAGTCCCGATC...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACGATCGGGACTTAGACTaGTGTTTGCGGCTTGCCTTC +
Preference number: 5 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYDRDLD*CLRLAF
Trigger: GAAGGCAAGCCGCAAACACAAGTCTAAGTCCCGATC...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTACTGGTGCACTGGCTaGATTGATTCCAGCAATTTC +
Preference number: 5 (lower is better)
Translates to: ILVSPTQPQCASIMRQALYWCTG*IDSSNF
Trigger: GAAATTGCTGGAATCAATCAAGCCAGTGCACCAGTA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTGCAGCCCAATCAATTaGGATCCTGTTGGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRCSPIN*DPVGAG
Trigger: TCCAGCACCAACAGGATCCAAATTGATTGGGCTGCA...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481229.2
CDS TCA 90 bp TTGCTGATGCATTCCCCATTCTGGTTGCCACATTCTGTTGAAGTTTaGATCCCCTTGGAAATTCCCATGATTGTTTGGACCAGATTCCAT +
Preference number: 5 (lower is better)
Translates to: LLMHSPFWLPHSVEV*IPLEIPMIVWTRFH
Trigger: ATGGAATCTGGTCCAAACAATCATGGGAATTTCCAAGGGGATTCAAACTTCAACAGAATGTGGCAACCAGAATGGGGAATGCATCAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000478777.5
ENST00000481229.2
ENST00000492294.5
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS GCA 90 bp CAGCTGCCAATACAGCTCTTTGTCTTGTTTACATGGGATCTACCATaGAAAAGTAGGGTAAGCAGATGCTCCCTGCCATTATATTTCTTC +
Preference number: 5 (lower is better)
Translates to: QLPIQLFVLFTWDLP*KSRVSRCSLPLYFF
Trigger: GAAGAAATATAATGGCAGGGAGCATCTGCTTACCCTACTTTTGCATGGTAGATCCCATGTAAACAAGACAAAGAGCTGTATTGGCAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463021.1
CDS CCA 90 bp CTGATAGTCAAACTGGTTCACTGGCCCCACTGCAAAATTATCGGGTaGTCCACCAAAGTTGTGATTGTTCTGGTTAAATATATGCCTGTT +
Preference number: 5 (lower is better)
Translates to: LIVKLVHWPHCKIIG*STKVVIVLVKYMPV
Trigger: AACAGGCATATATTTAACCAGAACAATCACAACTTTGGTGGACCACCCGATAATTTTGCAGTGGGGCCAGTGAACCAGTTTGACTATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000463021.1
ENST00000478777.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TTTGATTGTTGGAGATCTACTCCTACTGTGTCTCTTTTTCCTTTTAGGAGAAGACCCAATCAATCTGGCTaGGATCCTGTTGGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: FDCWRSTPTVSLFPFRRRPNQSG*DPVGAG
Trigger: TCCAGCACCAACAGGATCCAAGCCAGATTGATTGGG...TCTTCTCCTAAAAGGAAAAAGAGACACAGTAGGAGTAGATCTCCAACAATCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CAA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCACCCAATCAATCTGGCTaGGATCCTGTTGGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGAPNQSG*DPVGAG
Trigger: TCCAGCACCAACAGGATCCAAGCCAGATTGATTGGG...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGCATCATTCCTGGTGGTaGTTCTACCATGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRHHSWW*FYHALL
Trigger: CAGCAAAGCATGGTAGAACAACCACCAGGAATGATG...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCGAGGAACAATGTCCATaGGGCCTGGTGTTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTEEQCP*GLVLVA
Trigger: TGCCACCAACACCAGGCCCAATGGACATTGTTCCTC...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATGAGGAACAATGTCCATaGGGCCTGGTGTTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYEEQCP*GLVLVA
Trigger: TGCCACCAACACCAGGCCCAATGGACATTGTTCCTC...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTTAAATATATGCCTGTaGTCAGGGGCAAATTCCCCA +
Preference number: 5 (lower is better)
Translates to: ILVSPTQPQCASIMRQALLNICL*SGANSP
Trigger: TGGGGAATTTGCCCCTGACAACAGGCATATATTTAA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTCCTGGAGGTCCTGGTaGCCAATAAGGAGGATGAAA +
Preference number: 5 (lower is better)
Translates to: QPQCASIMRQALKTHGIFSWRSW*PIRRMK
Trigger: TTTCATCCTCCTTATTGGCAACCAGGACCTCCAGGA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTTTTACTGCGTCAATTaGTGGAGGCTCCTGCTTCAC +
Preference number: 5 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRFYCVN*WRLLLH
Trigger: GTGAAGCAGGAGCCTCCACAAATTGACGCAGTAAAA...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAAGTCACTGTGCTCTTCTaGAGGAACTGGGGATGGACT +
Preference number: 5 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQVTVLF*RNWGWT
Trigger: AGTCCATCCCCAGTTCCTCAAGAAGAGCACAGTGAC...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTGTCACTGTGCTCTTCTaGAGGAACTGGGGATGGACT +
Preference number: 5 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCVTVLF*RNWGWT
Trigger: AGTCCATCCCCAGTTCCTCAAGAAGAGCACAGTGAC...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TCTATCTCTAATCTTTACCCTAGCCCTATTGCTCTCTATTTTAATTCTGCGAGAGGAGCTTTCGTTGCTTaGCGGTGTGCATCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: SISNLYPSPIALYFNSARGAFVA*RCASLA
Trigger: AGCCAAAGATGCACACCGCAAAGCAACGAAAGCTCC...TCTCGCAGAATTAAAATAGAGAGCAATAGGGCTAGGGTAAAGATTAGAGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CAA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACTTGCAGGAGCTTTCGTaGCTTTGCGGTGTGCATCTT +
Preference number: 5 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYLQELS*LCGVHL
Trigger: AAGATGCACACCGCAAAGCAACGAAAGCTCCTGCAA...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTACTGTGCCAGCTGTTTaGCAGGAGCTTTCGTTGCTT +
Preference number: 5 (lower is better)
Translates to: QPQCASIMRQALKTHGIFTVPAV*QELSLL
Trigger: AAGCAACGAAAGCTCCTGCAAAACAGCTGGCACAGT...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp AAATACATTATAATCTTATGGGACCACTGTTGTACATGTGGCCCGTCATTGACTACTGTGCCAGCTGTTTaGCAGGAGCTTTCGTTGCTT +
Preference number: 5 (lower is better)
Translates to: KYIIILWDHCCTCGPSLTTVPAV*QELSLL
Trigger: AAGCAACGAAAGCTCCTGCAAAACAGCTGGCACAGT...AGTCAATGACGGGCCACATGTACAACAGTGGTCCCATAAGATTATAATGTATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681615.1
CDS-3UTR CAA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCTACTAGTTCTGCTATaGCTACTGGAACTACCACTA +
Preference number: 5 (lower is better)
Translates to: ILVSPTQPQCASIMRQALLLVLL*LLELPL
Trigger: TAGTGGTAGTTCCAGTAGCAATAGCAGAACTAGTAG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTGGTTCGTCTATCCCTaGAGCGACTTCTACTTCTAC +
Preference number: 5 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRWFVYP*SDFYFY
Trigger: GTAGAAGTAGAAGTCGCTCAAGGGATAGACGAACCA...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTGCGACTGGCACGATaGGTTCGTCTATCCCTTGAG +
Preference number: 5 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTLRLAR*VRLSLE
Trigger: CTCAAGGGATAGACGAACCAATCGTGCCAGTCGCAG...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTCATCATTCCTGGTGGTaGTTCTACCATGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: QPQCASIMRQALKTHGIFHHSWW*FYHALL
Trigger: CAGCAAAGCATGGTAGAACAACCACCAGGAATGATG...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTCATTGTAGACATATCTaGTCCATTTGGCATCATTCC +
Preference number: 5 (lower is better)
Translates to: ILVSPTQPQCASIMRQALHCRHI*SIWHHS
Trigger: GGAATGATGCCAAATGGACAAGATATGTCTACAATG...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GCGAGAATAGCTTCTACTCCTGCTACGTCTAGCTTTGATTGTTGGAGATCTACTCATTGTAGACATATCTaGTCCATTTGGCATCATTCC +
Preference number: 5 (lower is better)
Translates to: ARIASTPATSSFDCWRSTHCRHI*SIWHHS
Trigger: GGAATGATGCCAAATGGACAAGATATGTCTACAATG...AGTAGATCTCCAACAATCAAAGCTAGACGTAGCAGGAGTAGAAGCTATTCTCGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTGGTTGCCACATTCTGTaGAAGTTTGAATCCCCTTGG +
Preference number: 5 (lower is better)
Translates to: QPQCASIMRQALKTHGIFGCHIL*KFESPW
Trigger: CCAAGGGGATTCAAACTTCAACAGAATGTGGCAACC...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGCATTCCCCATTCTGGTaGCCACATTCTGTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMHSPFW*PHSVEV
Trigger: AACTTCAACAGAATGTGGCAACCAGAATGGGGAATG...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTAGGATGAAATCCACCTaGCGGTGGACCAAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFRMKST*RWTKSS
Trigger: GCTGCTTTTGGTCCACCGCAAGGTGGATTTCATCCT...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAAGGATGAAATCCACCTaGCGGTGGACCAAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKRMKST*RWTKSS
Trigger: GCTGCTTTTGGTCCACCGCAAGGTGGATTTCATCCT...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCAGGATGAAATCCACCTaGCGGTGGACCAAAAGCAGC +
Preference number: 5 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTRMKST*RWTKSS
Trigger: GCTGCTTTTGGTCCACCGCAAGGTGGATTTCATCCT...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTTCCTGGAGGTCCTGGTaGCCAATAAGGAGGATGAAA +
Preference number: 5 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCSWRSW*PIRRMK
Trigger: TTTCATCCTCCTTATTGGCAACCAGGACCTCCAGGA...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAATCCTGGAGGTCCTGGTaGCCAATAAGGAGGATGAAA +
Preference number: 5 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQSWRSW*PIRRMK
Trigger: TTTCATCCTCCTTATTGGCAACCAGGACCTCCAGGA...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTTTTACTGCGTCAATTaGTGGAGGCTCCTGCTTCAC +
Preference number: 5 (lower is better)
Translates to: QPQCASIMRQALKTHGIFFYCVN*WRLLLH
Trigger: GTGAAGCAGGAGCCTCCACAAATTGACGCAGTAAAA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
42% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACTTTTACTGCGTCAATTaGTGGAGGCTCCTGCTTCAC +
Preference number: 5 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYFYCVN*WRLLLH
Trigger: GTGAAGCAGGAGCCTCCACAAATTGACGCAGTAAAA...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCGTCACTGTGCTCTTCTaGAGGAACTGGGGATGGACT +
Preference number: 5 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTVTVLF*RNWGWT
Trigger: AGTCCATCCCCAGTTCCTCAAGAAGAGCACAGTGAC...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTGGAGCTTTCGTTGCTTaGCGGTGTGCATCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFGAFVA*RCASLA
Trigger: AGCCAAAGATGCACACCGCAAAGCAACGAAAGCTCC...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCATTGCAGGAGCTTTCGTaGCTTTGCGGTGTGCATCTT +
Preference number: 5 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGALQELS*LCGVHL
Trigger: AAGATGCACACCGCAAAGCAACGAAAGCTCCTGCAA...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGCTGCTACGTCTAGCTTaGATTGTTGGAGATCTACTC +
Preference number: 5 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMLLRLA*IVGDLL
Trigger: GAGTAGATCTCCAACAATCAAAGCTAGACGTAGCAG...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACTGGTTCGTCTATCCCTaGAGCGACTTCTACTTCTAC +
Preference number: 5 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYWFVYP*SDFYFY
Trigger: GTAGAAGTAGAAGTCGCTCAAGGGATAGACGAACCA...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTGGTTCGTCTATCCCTaGAGCGACTTCTACTTCTAC +
Preference number: 5 (lower is better)
Translates to: QPQCASIMRQALKTHGIFWFVYP*SDFYFY
Trigger: GTAGAAGTAGAAGTCGCTCAAGGGATAGACGAACCA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACACTTGTGTTTGCGGCTaGCCTTCTTACCAGACCTTT +
Preference number: 5 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYTCVCG*PSYQTF
Trigger: AAAGGTCTGGTAAGAAGGCAAGCCGCAAACACAAGT...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTGACTTAGACTTGTGTTaGCGGCTTGCCTTCTTACCA +
Preference number: 5 (lower is better)
Translates to: QPQCASIMRQALKTHGIFDLDLC*RLAFLP
Trigger: TGGTAAGAAGGCAAGCCGCAAACACAAGTCTAAGTC...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCGATCGGGACTTAGACTaGTGTTTGCGGCTTGCCTTC +
Preference number: 5 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTDRDLD*CLRLAF
Trigger: GAAGGCAAGCCGCAAACACAAGTCTAAGTCCCGATC...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAGATCGGGACTTAGACTaGTGTTTGCGGCTTGCCTTC +
Preference number: 5 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKDRDLD*CLRLAF
Trigger: GAAGGCAAGCCGCAAACACAAGTCTAAGTCCCGATC...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAACATCATGGCATTCTaGCCACATCATTCCTCAGCG +
Preference number: 5 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYNIMAF*PHHSSA
Trigger: CGCTGAGGAATGATGTGGCAAGAATGCCATGATGTT...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGTACTGGTGCACTGGCTaGATTGATTCCAGCAATTTC +
Preference number: 5 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMYWCTG*IDSSNF
Trigger: GAAATTGCTGGAATCAATCAAGCCAGTGCACCAGTA...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCAGACGGGGAGGGGTTGTaGATCTTCCATCTGTTTATC +
Preference number: 5 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGADGEGL*IFHLFI
Trigger: GATAAACAGATGGAAGATCAACAACCCCTCCCCGTC...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681611.1
CDS-3UTR CAA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCACATCATTCCTGGTGGTaGTTCTACCATGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGAHHSWW*FYHALL
Trigger: CAGCAAAGCATGGTAGAACAACCACCAGGAATGATG...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAACATCATTCCTGGTGGTaGTTCTACCATGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQHHSWW*FYHALL
Trigger: CAGCAAAGCATGGTAGAACAACCACCAGGAATGATG...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TTTGATTGTTGGAGATCTACTCCTACTGTGTCTCTTTTTCCTTTTAGGAGAAGACATCATTCCTGGTGGTaGTTCTACCATGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: FDCWRSTPTVSLFPFRRRHHSWW*FYHALL
Trigger: CAGCAAAGCATGGTAGAACAACCACCAGGAATGATG...TCTTCTCCTAAAAGGAAAAAGAGACACAGTAGGAGTAGATCTCCAACAATCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CAA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCAGGTTGCCACATTCTGTaGAAGTTTGAATCCCCTTGG +
Preference number: 5 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGAGCHIL*KFESPW
Trigger: CCAAGGGGATTCAAACTTCAACAGAATGTGGCAACC...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTTCCTGGAGGTCCTGGTaGCCAATAAGGAGGATGAAA +
Preference number: 5 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFSWRSW*PIRRMK
Trigger: TTTCATCCTCCTTATTGGCAACCAGGACCTCCAGGA...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAATTTTACTGCGTCAATTaGTGGAGGCTCCTGCTTCAC +
Preference number: 5 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQFYCVN*WRLLLH
Trigger: GTGAAGCAGGAGCCTCCACAAATTGACGCAGTAAAA...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTTTTTACTGCGTCAATTaGTGGAGGCTCCTGCTTCAC +
Preference number: 5 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCFYCVN*WRLLLH
Trigger: GTGAAGCAGGAGCCTCCACAAATTGACGCAGTAAAA...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTTTGCAGGAGCTTTCGTaGCTTTGCGGTGTGCATCTT +
Preference number: 5 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFLQELS*LCGVHL
Trigger: AAGATGCACACCGCAAAGCAACGAAAGCTCCTGCAA...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAATTGCAGGAGCTTTCGTaGCTTTGCGGTGTGCATCTT +
Preference number: 5 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKLQELS*LCGVHL
Trigger: AAGATGCACACCGCAAAGCAACGAAAGCTCCTGCAA...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCACTGTGCCAGCTGTTTaGCAGGAGCTTTCGTTGCTT +
Preference number: 5 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTTVPAV*QELSLL
Trigger: AAGCAACGAAAGCTCCTGCAAAACAGCTGGCACAGT...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTACTGTGCCAGCTGTTTaGCAGGAGCTTTCGTTGCTT +
Preference number: 5 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFTVPAV*QELSLL
Trigger: AAGCAACGAAAGCTCCTGCAAAACAGCTGGCACAGT...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTCACCGTCTGCTTCTCTaGCTTCTAGTAGTGATAAAC +
Preference number: 5 (lower is better)
Translates to: QPQCASIMRQALKTHGIFHRLLL*LLVVIN
Trigger: GTTTATCACTACTAGAAGCAAGAGAAGCAGACGGTG...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGCTACTAGTTCTGCTATaGCTACTGGAACTACCACTA +
Preference number: 5 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMLLVLL*LLELPL
Trigger: TAGTGGTAGTTCCAGTAGCAATAGCAGAACTAGTAG...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTCTGCTACGTCTAGCTTaGATTGTTGGAGATCTACTC +
Preference number: 5 (lower is better)
Translates to: QPQCASIMRQALKTHGIFLLRLA*IVGDLL
Trigger: GAGTAGATCTCCAACAATCAAAGCTAGACGTAGCAG...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATTCTGGTTTCACCTACACAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTTTTACCCTAGCCCTATaGCTCTCTATTTTAATTCTG +
Preference number: 5 (lower is better)
Translates to: ILVSPTQPQCASIMRQALFTLAL*LSILIL
Trigger: CAGAATTAAAATAGAGAGCAATAGGGCTAGGGTAAA...AAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTGTGTAGGTGAAACCAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAACTTCTTACCAGACCTTaGAGATTTCTCCACGGATCG +
Preference number: 5 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQLLTRP*RFLHGS
Trigger: CGATCCGTGGAGAAATCTCAAAGGTCTGGTAAGAAG...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCACTTCTTACCAGACCTTaGAGATTTCTCCACGGATCG +
Preference number: 5 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGALLTRP*RFLHGS
Trigger: CGATCCGTGGAGAAATCTCAAAGGTCTGGTAAGAAG...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAAACTTGTGTTTGCGGCTaGCCTTCTTACCAGACCTTT +
Preference number: 5 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQTCVCG*PSYQTF
Trigger: AAAGGTCTGGTAAGAAGGCAAGCCGCAAACACAAGT...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TTTGATTGTTGGAGATCTACTCCTACTGTGTCTCTTTTTCCTTTTAGGAGAAGAACTTGTGTTTGCGGCTaGCCTTCTTACCAGACCTTT +
Preference number: 5 (lower is better)
Translates to: FDCWRSTPTVSLFPFRRRTCVCG*PSYQTF
Trigger: AAAGGTCTGGTAAGAAGGCAAGCCGCAAACACAAGT...TCTTCTCCTAAAAGGAAAAAGAGACACAGTAGGAGTAGATCTCCAACAATCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CAA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCAGACTTAGACTTGTGTTaGCGGCTTGCCTTCTTACCA +
Preference number: 5 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGADLDLC*RLAFLP
Trigger: TGGTAAGAAGGCAAGCCGCAAACACAAGTCTAAGTC...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTAACATCATGGCATTCTaGCCACATCATTCCTCAGCG +
Preference number: 5 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCNIMAF*PHHSSA
Trigger: CGCTGAGGAATGATGTGGCAAGAATGCCATGATGTT...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TCTATCTCTAATCTTTACCCTAGCCCTATTGCTCTCTATTTTAATTCTGCGAGAAACATCATGGCATTCTaGCCACATCATTCCTCAGCG +
Preference number: 5 (lower is better)
Translates to: SISNLYPSPIALYFNSARNIMAF*PHHSSA
Trigger: CGCTGAGGAATGATGTGGCAAGAATGCCATGATGTT...TCTCGCAGAATTAAAATAGAGAGCAATAGGGCTAGGGTAAAGATTAGAGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTACTGGTGCACTGGCTaGATTGATTCCAGCAATTTC +
Preference number: 5 (lower is better)
Translates to: QPQCASIMRQALKTHGIFYWCTG*IDSSNF
Trigger: GAAATTGCTGGAATCAATCAAGCCAGTGCACCAGTA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACTACTGGTGCACTGGCTaGATTGATTCCAGCAATTTC +
Preference number: 5 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYYWCTG*IDSSNF
Trigger: GAAATTGCTGGAATCAATCAAGCCAGTGCACCAGTA...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGATACGACGGGGAGGGGTaGTTGATCTTCCATCTGTTT +
Preference number: 5 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGYDGEG*LIFHLF
Trigger: AAACAGATGGAAGATCAACAACCCCTCCCCGTCGTA...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681611.1
CDS TCA 90 bp GGTTGCCACATTCTGTTGAAGTTTGAATCCCCTTGGAAATTCCCATaGTTGTTTGGACCAGATTCCATTGTAGACATATCTTGTCCATTT +
Preference number: 5 (lower is better)
Translates to: GCHILLKFESPWKFP*LFGPDSIVDISCPF
Trigger: AAATGGACAAGATATGTCTACAATGGAATCTGGTCCAAACAATCATGGGAATTTCCAAGGGGATTCAAACTTCAACAGAATGTGGCAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000466057.1
ENST00000478777.5
ENST00000481229.2
ENST00000492294.5
ENST00000498075.1
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS CCA 90 bp CAAATTAATACAATATACTCTCTGGGACACACGTGTGTTATGAACTaGGACAGTAGAAATCCATGTGTGCAGCACATCCAAGAATTCCAT +
Preference number: 5 (lower is better)
Translates to: QINTIYSLGHTCVMN*DSRNPCVQHIQEFH
Trigger: ATGGAATTCTTGGATGTGCTGCACACATGGATTTCTACTGTCCCAGTTCATAACACACGTGTGTCCCAGAGAGTATATTGTATTAATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463021.1
CDS-3UTR CAA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGACATCATTCCTGGTGGTaGTTCTACCATGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGHHSWW*FYHALL
Trigger: CAGCAAAGCATGGTAGAACAACCACCAGGAATGATG...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTCATCATTCCTGGTGGTaGTTCTACCATGCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFHHSWW*FYHALL
Trigger: CAGCAAAGCATGGTAGAACAACCACCAGGAATGATG...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAGGTTGCCACATTCTGTaGAAGTTTGAATCCCCTTGG +
Preference number: 5 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKGCHIL*KFESPW
Trigger: CCAAGGGGATTCAAACTTCAACAGAATGTGGCAACC...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATGGTTGCCACATTCTGTaGAAGTTTGAATCCCCTTGG +
Preference number: 5 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYGCHIL*KFESPW
Trigger: CCAAGGGGATTCAAACTTCAACAGAATGTGGCAACC...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTGTCAGCAACATCATTaGATACTCTTTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRCQQHH*ILFLLF
Trigger: GAAGAGGAGAAAGAGTATCAAATGATGTTGCTGACA...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGTGTCAGCAACATCATTaGATACTCTTTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMCQQHH*ILFLLF
Trigger: GAAGAGGAGAAAGAGTATCAAATGATGTTGCTGACA...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCACCGTCTGCTTCTCTaGCTTCTAGTAGTGATAAAC +
Preference number: 5 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCHRLLL*LLVVIN
Trigger: GTTTATCACTACTAGAAGCAAGAGAAGCAGACGGTG...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCTGCTACGTCTAGCTTaGATTGTTGGAGATCTACTC +
Preference number: 5 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCLLRLA*IVGDLL
Trigger: GAGTAGATCTCCAACAATCAAAGCTAGACGTAGCAG...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TTTGATTGTTGGAGATCTACTCCTACTGTGTCTCTTTTTCCTTTTAGGAGAAGACTGCTACGTCTAGCTTaGATTGTTGGAGATCTACTC +
Preference number: 5 (lower is better)
Translates to: FDCWRSTPTVSLFPFRRRLLRLA*IVGDLL
Trigger: GAGTAGATCTCCAACAATCAAAGCTAGACGTAGCAG...TCTTCTCCTAAAAGGAAAAAGAGACACAGTAGGAGTAGATCTCCAACAATCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTTAGCCTTCTTTTCTTaGCTACTTCCTGGAGACTCA +
Preference number: 5 (lower is better)
Translates to: QPQCASIMRQALKTHGIFLAFFS*LLPGDS
Trigger: TGAGTCTCCAGGAAGTAGCAAAGAAAAGAAGGCTAA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACTTAGCCTTCTTTTCTTaGCTACTTCCTGGAGACTCA +
Preference number: 5 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYLAFFS*LLPGDS
Trigger: TGAGTCTCCAGGAAGTAGCAAAGAAAAGAAGGCTAA...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATCTTCTTACCAGACCTTaGAGATTTCTCCACGGATCG +
Preference number: 5 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYLLTRP*RFLHGS
Trigger: CGATCCGTGGAGAAATCTCAAAGGTCTGGTAAGAAG...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTCTTACCAGACCTTaGAGATTTCTCCACGGATCG +
Preference number: 5 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTLLTRP*RFLHGS
Trigger: CGATCCGTGGAGAAATCTCAAAGGTCTGGTAAGAAG...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTCTTCTTACCAGACCTTaGAGATTTCTCCACGGATCG +
Preference number: 5 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFLLTRP*RFLHGS
Trigger: CGATCCGTGGAGAAATCTCAAAGGTCTGGTAAGAAG...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAGACTTAGACTTGTGTTaGCGGCTTGCCTTCTTACCA +
Preference number: 5 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKDLDLC*RLAFLP
Trigger: TGGTAAGAAGGCAAGCCGCAAACACAAGTCTAAGTC...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTGACTTAGACTTGTGTTaGCGGCTTGCCTTCTTACCA +
Preference number: 5 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFDLDLC*RLAFLP
Trigger: TGGTAAGAAGGCAAGCCGCAAACACAAGTCTAAGTC...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATAACATCATGGCATTCTaGCCACATCATTCCTCAGCG +
Preference number: 5 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYNIMAF*PHHSSA
Trigger: CGCTGAGGAATGATGTGGCAAGAATGCCATGATGTT...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCATACTGGTGCACTGGCTaGATTGATTCCAGCAATTTC +
Preference number: 5 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGAYWCTG*IDSSNF
Trigger: GAAATTGCTGGAATCAATCAAGCCAGTGCACCAGTA...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACGAGGAAACACTGATCTaGGCAAAAATCTGGCATGAT +
Preference number: 5 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYEETLI*AKIWHD
Trigger: ATCATGCCAGATTTTTGCCAAGATCAGTGTTTCCTC...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAACATGTGGCCCGTCATaGACTGAAACGTCGTTATGT +
Preference number: 5 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKTCGPS*TETSLC
Trigger: ACATAACGACGTTTCAGTCAATGACGGGCCACATGT...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681615.1
CDS TCA 90 bp TTCTTCAAATTAATACAATATACTCTCTGGGACACACGTGTGTTATaGACTGGGACAGTAGAAATCCATGTGTGCAGCACATCCAAGAAT +
Preference number: 5 (lower is better)
Translates to: FFKLIQYTLWDTRVL*TGTVEIHVCSTSKN
Trigger: ATTCTTGGATGTGCTGCACACATGGATTTCTACTGTCCCAGTTCATAACACACGTGTGTCCCAGAGAGTATATTGTATTAATTTGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463021.1
CDS GCA 90 bp CAAGAACCTAGGCTTACTTGTCTTAAGATTTTCCGGCTATGTAAATaGAAAGAGGCTTCTAAAAGCCAGCTGATAAGCTACTTTCAAGAA +
Preference number: 5 (lower is better)
Translates to: QEPRLTCLKIFRLCK*KEASKSQLISYFQE
Trigger: TTCTTGAAAGTAGCTTATCAGCTGGCTTTTAGAAGCCTCTTTGCATTTACATAGCCGGAAAATCTTAAGACAAGTAAGCCTAGGTTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463021.1
CDS-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTCATTGTAGACATATCTaGTCCATTTGGCATCATTCC +
Preference number: 5 (lower is better)
Translates to: QPQCASIMRQALKTHGIFHCRHI*SIWHHS
Trigger: GGAATGATGCCAAATGGACAAGATATGTCTACAATG...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACATTCCCCATTCTGGTaGCCACATTCTGTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKHSPFW*PHSVEV
Trigger: AACTTCAACAGAATGTGGCAACCAGAATGGGGAATG...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGACATTCCCCATTCTGGTaGCCACATTCTGTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGHSPFW*PHSVEV
Trigger: AACTTCAACAGAATGTGGCAACCAGAATGGGGAATG...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp AAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTCAATTAAATATATGCCTGTaGTCAGGGGCAAATTCCCCA +
Preference number: 5 (lower is better)
Translates to: KQKWVTVEYSSRLDYYCQLNICL*SGANSP
Trigger: TGGGGAATTTGCCCCTGACAACAGGCATATATTTAA...TTGACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCATTAAATATATGCCTGTaGTCAGGGGCAAATTCCCCA +
Preference number: 5 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGALNICL*SGANSP
Trigger: TGGGGAATTTGCCCCTGACAACAGGCATATATTTAA...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTGTCAGCAACATCATTaGATACTCTTTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: QPQCASIMRQALKTHGIFCQQHH*ILFLLF
Trigger: GAAGAGGAGAAAGAGTATCAAATGATGTTGCTGACA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGACACCGTCTGCTTCTCTaGCTTCTAGTAGTGATAAAC +
Preference number: 5 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGHRLLL*LLVVIN
Trigger: GTTTATCACTACTAGAAGCAAGAGAAGCAGACGGTG...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTTTCATACCCTTAAAGTaGGAATCTGGCAAAAGTCCA +
Preference number: 5 (lower is better)
Translates to: QPQCASIMRQALKTHGIFFIPLK*ESGKSP
Trigger: TGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAA...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGATACTGGTGCACTGGCTaGATTGATTCCAGCAATTTC +
Preference number: 5 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGYWCTG*IDSSNF
Trigger: GAAATTGCTGGAATCAATCAAGCCAGTGCACCAGTA...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTGCTCTAGTTCATAACTaGCCCAAAAATGTGCATATC +
Preference number: 5 (lower is better)
Translates to: QPQCASIMRQALKTHGIFALVHN*PKNVHI
Trigger: GATATGCACATTTTTGGGCAAGTTATGAACTAGAGC...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGAATCCAGACCAAGGATaGTCTCAAAAATTTGATCTG +
Preference number: 5 (lower is better)
Translates to: LFLALFHTLKVGIWQKSMNPDQG*SQKFDL
Trigger: CAGATCAAATTTTTGAGACAATCCTTGGTCTGGATT...CATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GTCAGGAAATTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGAATCCAGACCAAGGATaGTCTCAAAAATTTGATCTG +
Preference number: 5 (lower is better)
Translates to: VRKLTQTCIIQHSSIDLRNPDQG*SQKFDL
Trigger: CAGATCAAATTTTTGAGACAATCCTTGGTCTGGATT...CCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAATTTCCTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTTTAAATATATGCCTGTaGTCAGGGGCAAATTCCCCA +
Preference number: 5 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFLNICL*SGANSP
Trigger: TGGGGAATTTGCCCCTGACAACAGGCATATATTTAA...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TCTCCTTCTATCTCTAATCTTTACCCTAGCCCTATTGCTCTCTATTTTAATTCTTTAAATATATGCCTGTaGTCAGGGGCAAATTCCCCA +
Preference number: 5 (lower is better)
Translates to: SPSISNLYPSPIALYFNSLNICL*SGANSP
Trigger: TGGGGAATTTGCCCCTGACAACAGGCATATATTTAA...AGAATTAAAATAGAGAGCAATAGGGCTAGGGTAAAGATTAGAGATAGAAGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS-3UTR CAA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTTGTCAGCAACATCATTaGATACTCTTTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCCQQHH*ILFLLF
Trigger: GAAGAGGAGAAAGAGTATCAAATGATGTTGCTGACA...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGACTACTAGTTCTGCTATaGCTACTGGAACTACCACTA +
Preference number: 5 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGLLVLL*LLELPL
Trigger: TAGTGGTAGTTCCAGTAGCAATAGCAGAACTAGTAG...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTCTTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACTTTACCCTAGCCCTATaGCTCTCTATTTTAATTCTG +
Preference number: 5 (lower is better)
Translates to: LFHTLKVGIWQKSMGTIYFTLAL*LSILIL
Trigger: CAGAATTAAAATAGAGAGCAATAGGGCTAGGGTAAA...GTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAATTAGCCTTCTTTTCTTaGCTACTTCCTGGAGACTCA +
Preference number: 5 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKLAFFS*LLPGDS
Trigger: TGAGTCTCCAGGAAGTAGCAAAGAAAAGAAGGCTAA...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTTTAGCCTTCTTTTCTTaGCTACTTCCTGGAGACTCA +
Preference number: 5 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFLAFFS*LLPGDS
Trigger: TGAGTCTCCAGGAAGTAGCAAAGAAAAGAAGGCTAA...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCATTCATACCCTTAAAGTaGGAATCTGGCAAAAGTCCA +
Preference number: 5 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGAFIPLK*ESGKSP
Trigger: TGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAA...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAGAGGAAACACTGATCTaGGCAAAAATCTGGCATGAT +
Preference number: 5 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGEETLI*AKIWHD
Trigger: ATCATGCCAGATTTTTGCCAAGATCAGTGTTTCCTC...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAAGAGGAAACACTGATCTaGGCAAAAATCTGGCATGAT +
Preference number: 5 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKEETLI*AKIWHD
Trigger: ATCATGCCAGATTTTTGCCAAGATCAGTGTTTCCTC...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAGCCACAATGTGCCTCTATAATGAGACAAGCCCTTAAAACTCATGGAATTTTTAATCCAGACCAAGGATaGTCTCAAAAATTTGATCTG +
Preference number: 5 (lower is better)
Translates to: QPQCASIMRQALKTHGIFNPDQG*SQKFDL
Trigger: CAGATCAAATTTTTGAGACAATCCTTGGTCTGGATT...AAAAATTCCATGAGTTTTAAGGGCTTGTCTCATTATAGAGGCACATTGTGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp AAATACATTATAATCTTATGGGACCACTGTTGTACATGTGGCCCGTCATTGACTAATCCAGACCAAGGATaGTCTCAAAAATTTGATCTG +
Preference number: 5 (lower is better)
Translates to: KYIIILWDHCCTCGPSLTNPDQG*SQKFDL
Trigger: CAGATCAAATTTTTGAGACAATCCTTGGTCTGGATT...AGTCAATGACGGGCCACATGTACAACAGTGGTCCCATAAGATTATAATGTATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681615.1
CDS-3UTR CAA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATCATTGTAGACATATCTaGTCCATTTGGCATCATTCC +
Preference number: 5 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYHCRHI*SIWHHS
Trigger: GGAATGATGCCAAATGGACAAGATATGTCTACAATG...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCATTGTAGACATATCTaGTCCATTTGGCATCATTCC +
Preference number: 5 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTHCRHI*SIWHHS
Trigger: GGAATGATGCCAAATGGACAAGATATGTCTACAATG...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGACATTGTAGACATATCTaGTCCATTTGGCATCATTCC +
Preference number: 5 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGHCRHI*SIWHHS
Trigger: GGAATGATGCCAAATGGACAAGATATGTCTACAATG...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTTGTCAGCAACATCATTaGATACTCTTTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFCQQHH*ILFLLF
Trigger: GAAGAGGAGAAAGAGTATCAAATGATGTTGCTGACA...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTAAAACAGAAGTGGGTGACTGTAGAATATAGTTCCAGACTTGACTATTACTGTTTTACCCTAGCCCTATaGCTCTCTATTTTAATTCTG +
Preference number: 5 (lower is better)
Translates to: LKQKWVTVEYSSRLDYYCFTLAL*LSILIL
Trigger: CAGAATTAAAATAGAGAGCAATAGGGCTAGGGTAAA...ACAGTAATAGTCAAGTCTGGAACTATATTCTACAGTCACCCACTTCTGTTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGATTCATACCCTTAAAGTaGGAATCTGGCAAAAGTCCA +
Preference number: 5 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGFIPLK*ESGKSP
Trigger: TGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAA...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTTTCATACCCTTAAAGTaGGAATCTGGCAAAAGTCCA +
Preference number: 5 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFFIPLK*ESGKSP
Trigger: TGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAA...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS-3UTR CAA 90 bp TTGACACAAACCTGCATAATACAGCATTCCTCCATTGATTTGAGGTCATATTATGCTCTAGTTCATAACTaGCCCAAAAATGTGCATATC +
Preference number: 5 (lower is better)
Translates to: LTQTCIIQHSSIDLRSYYALVHN*PKNVHI
Trigger: GATATGCACATTTTTGGGCAAGTTATGAACTAGAGC...ATAATATGACCTCAAATCAATGGAGGAATGCTGTATTATGCAGGTTTGTGTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp GTCAAATACTTCCAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCGCTCTAGTTCATAACTaGCCCAAAAATGTGCATATC +
Preference number: 5 (lower is better)
Translates to: VKYFQMKSKGLFLALFHTALVHN*PKNVHI
Trigger: GATATGCACATTTTTGGGCAAGTTATGAACTAGAGC...GGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTGGAAGTATTTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CAAATGAAAAGTAAAGGTCTATTTCTAGCCCTCTTTCATACCCTTAAAGTTGGAGCTCTAGTTCATAACTaGCCCAAAAATGTGCATATC +
Preference number: 5 (lower is better)
Translates to: QMKSKGLFLALFHTLKVGALVHN*PKNVHI
Trigger: GATATGCACATTTTTGGGCAAGTTATGAACTAGAGC...TCCAACTTTAAGGGTATGAAAGAGGGCTAGAAATAGACCTTTACTTTTCATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp CTTGACTATTACTGTCAAACACAATCGTTCCTTACAAATAACTCTACTGGTGCAAATCCAGACCAAGGATaGTCTCAAAAATTTGATCTG +
Preference number: 5 (lower is better)
Translates to: LDYYCQTQSFLTNNSTGANPDQG*SQKFDL
Trigger: CAGATCAAATTTTTGAGACAATCCTTGGTCTGGATT...TGCACCAGTAGAGTTATTTGTAAGGAACGATTGTGTTTGACAGTAATAGTCAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS-3UTR CAA 90 bp ATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAACTTTATGAATCCTTCTAGATaGATCCTTTCCTGTATGCTC +
Preference number: 5 (lower is better)
Translates to: IPLKLESGKSPWVQFTNFMNPSR*ILSCML
Trigger: GAGCATACAGGAAAGGATCAATCTAGAAGGATTCAT...AAAGTTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647811.1
CDS CCA 90 bp ATACAACACTATTCCCCACAGAGTTCTATGTCCCTAGGAATGAATTaGATGCTACAGAGGAAATTATATACAATTCCATTAACATGTCAT +
Preference number: 5 (lower is better)
Translates to: IQHYSPQSSMSLGMN*MLQRKLYTIPLTCH
Trigger: ATGACATGTTAATGGAATTGTATATAATTTCCTCTGTAGCATCCAATTCATTCCTAGGGACATAGAACTCTGTGGGGAATAGTGTTGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463021.1
CDS-3UTR CAA 90 bp TTTCATACCCTTAAAGTTGGAATCTGGCAAAAGTCCATGGGTACAATTTACAAATTTACCCTAGCCCTATaGCTCTCTATTTTAATTCTG +
Preference number: 5 (lower is better)
Translates to: FHTLKVGIWQKSMGTIYKFTLAL*LSILIL
Trigger: CAGAATTAAAATAGAGAGCAATAGGGCTAGGGTAAA...TTTGTAAATTGTACCCATGGACTTTTGCCAGATTCCAACTTTAAGGGTATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369239.10
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681615.1
CDS CCA 72 bp GCTGTCTTCAGAAGGAGGAACAATGTCCATTGGGCCTaGTGTTGGTGGCATCCATGGCTGATCTGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: AVFRRRNNVHWA*CWWHPWLIWRG
Trigger: CCCCCTCCAGATCAGCCATGGATGCCACCAACACCAGGCCCAATGGACATTGTTCCTCCTTCTGAAGACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000463021.1
ENST00000478777.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS CCA 72 bp CGATCCCTGAATGATGATGGCCTTTCTCTTCGATTCTaGGGAGGTGCTGGAGGTCCTGGAGGTCCTGGTTGC +
Preference number: 6 (lower is better)
Translates to: RSLNDDGLSLRF*GGAGGPGGPGC
Trigger: GCAACCAGGACCTCCAGGACCTCCAGCACCTCCCCAGAATCGAAGAGAAAGGCCATCATCATTCAGGGATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000463021.1
ENST00000478777.5
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS GCA 72 bp GCCGCCGTTCCGGTAACACCTCTCCAACGCTTTCGATaGTTCTACTTCTTCGGGAACAAGACAAGATGGCGC +
Preference number: 6 (lower is better)
Translates to: AAVPVTPLQRFR*FYFFGNKTRWR
Trigger: GCGCCATCTTGTCTTGTTCCCGAAGAAGTAGAAGCATCGAAAGCGTTGGAGAGGTGTTACCGGAACGGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000438806.5
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS CCA 72 bp TCCTGTTGGTGCTGGAATGACTGCATCCATTGTTGCTaGTTCAAGGGCCACTGCTGCCAAGGCTGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: SCWCWNDCIHCC*FKGHCCQGCPP
Trigger: AGGAGGACAGCCTTGGCAGCAGTGGCCCTTGAACCAGCAACAATGGATGCAGTCATTCCAGCACCAACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000466057.1
ENST00000478777.5
ENST00000481229.2
ENST00000492294.5
ENST00000498075.1
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS CCA 72 bp CGATCCCTGAATGATGATGGCCTTTCTCTTCGATTCTaGGGAGGTGCTGGAGGTCCTGGAGGTCCTGATAGT +
Preference number: 6 (lower is better)
Translates to: RSLNDDGLSLRF*GGAGGPGGPDS
Trigger: ACTATCAGGACCTCCAGGACCTCCAGCACCTCCCCAGAATCGAAGAGAAAGGCCATCATCATTCAGGGATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS TCA 72 bp GAGAGACAAAGAATGCTCTCTTCCCTAGATGCCAAGTaGGGTTTCCAGAGTGTTCCCAGCCCCTGTCAGCCT +
Preference number: 6 (lower is better)
Translates to: ERQRMLSSLDAK*GFQSVPSPCQP
Trigger: AGGCTGACAGGGGCTGGGAACACTCTGGAAACCTCACTTGGCATCTAGGGAAGAGAGCATTCTTTGTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466057.1
ENST00000498075.1
CDS GCA 72 bp TCAATCTGGCTTGGATCCTGTTGGTGCTGGAATGACTaGATCCATTGTTGCTGGTTCAAGGGCCACTGCTGC +
Preference number: 6 (lower is better)
Translates to: SIWLGSCWCWND*IHCCWFKGHCC
Trigger: GCAGCAGTGGCCCTTGAACCAGCAACAATGGATGCAGTCATTCCAGCACCAACAGGATCCAAGCCAGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000466057.1
ENST00000478777.5
ENST00000492294.5
ENST00000498075.1
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS GCA 72 bp TGGAAAACACTTACCGAGTCCAGTGAGGGAAGCCAGTaGACTGGACTGTGCCAGCTGTTTTGCAGGAGCTTT +
Preference number: 6 (lower is better)
Translates to: WKTLTESSEGSQ*TGLCQLFCRSF
Trigger: AAAGCTCCTGCAAAACAGCTGGCACAGTCCAGTGCACTGGCTTCCCTCACTGGACTCGGTAAGTGTTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460600.1
CDS CCA 72 bp TGCTGTCCTGAAGCTTCTCTTTGGGCAATCCAAGCTTaGGCCAATGCAGCCCAATCAATCTGGCTTGGATCC +
Preference number: 6 (lower is better)
Translates to: CCPEASLWAIQA*ANAAQSIWLGS
Trigger: GGATCCAAGCCAGATTGATTGGGCTGCATTGGCCCAAGCTTGGATTGCCCAAAGAGAAGCTTCAGGACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000466057.1
ENST00000478777.5
ENST00000492294.5
ENST00000498075.1
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS CCA 72 bp GAGGTCCTGGAGGTCCTGATAGTCAAACTGGTTCACTaGCCCCACTGCAAAATTATCGGGTGGTCCACCAAA +
Preference number: 6 (lower is better)
Translates to: EVLEVLIVKLVH*PHCKIIGWSTK
Trigger: TTTGGTGGACCACCCGATAATTTTGCAGTGGGGCCAGTGAACCAGTTTGACTATCAGGACCTCCAGGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS CAA 72 bp AGGTCCTGGTTGCCAATAAGGAGGATGAAATCCACCTaGCGGTGGACCAAAAGCAGCCCCATGCTGATAGTC +
Preference number: 6 (lower is better)
Translates to: RSWLPIRRMKST*RWTKSSPMLIV
Trigger: GACTATCAGCATGGGGCTGCTTTTGGTCCACCGCAAGGTGGATTTCATCCTCCTTATTGGCAACCAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000478777.5
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS CAA 72 bp AGGTCCTGGTTGCCAATAAGGAGGATGAAATCCACCTaGCGGTGGACCAAAAGCAGCCCCATGCTGAAAGAG +
Preference number: 6 (lower is better)
Translates to: RSWLPIRRMKST*RWTKSSPMLKE
Trigger: CTCTTTCAGCATGGGGCTGCTTTTGGTCCACCGCAAGGTGGATTTCATCCTCCTTATTGGCAACCAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463021.1
CDS CAA 90 bp AGGTCCTGGAGGTCCTGGTTGCCAATAAGGAGGATGAAATCCACCTaGCGGTGGACCAAAAGCAGCCCCATGCTGAAAGAGTATTGCAGT +
Preference number: 6 (lower is better)
Translates to: RSWRSWLPIRRMKST*RWTKSSPMLKEYCS
Trigger: ACTGCAATACTCTTTCAGCATGGGGCTGCTTTTGGTCCACCGCAAGGTGGATTTCATCCTCCTTATTGGCAACCAGGACCTCCAGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463021.1
CDS TCA 72 bp CCAATCAATCTGGCTTGGATCCTGTTGGTGCTGGAATaGCTGCATCCATTGTTGCTGGTTCAAGGGCCACTG +
Preference number: 6 (lower is better)
Translates to: PINLAWILLVLE*LHPLLLVQGPL
Trigger: CAGTGGCCCTTGAACCAGCAACAATGGATGCAGTCATTCCAGCACCAACAGGATCCAAGCCAGATTGATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000466057.1
ENST00000478777.5
ENST00000492294.5
ENST00000498075.1
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS TCA 72 bp GGCTCCTGCTTCACAGGAAGTGCAATAGGTGAACGCTaGCGATCCCTGAATGATGATGGCCTTTCTCTTCGA +
Preference number: 6 (lower is better)
Translates to: GSCFTGSAIGER*RSLNDDGLSLR
Trigger: TCGAAGAGAAAGGCCATCATCATTCAGGGATCGTCAGCGTTCACCTATTGCACTTCCTGTGAAGCAGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000463021.1
ENST00000478777.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS TCA 72 bp CCTCTCACAAATATGGAAAACACTTACCGAGTCCAGTaGGGGAAGCCAGTGCACTGGACTGTGCCAGCTGTT +
Preference number: 6 (lower is better)
Translates to: PLTNMENTYRVQ*GKPVHWTVPAV
Trigger: AACAGCTGGCACAGTCCAGTGCACTGGCTTCCCTCACTGGACTCGGTAAGTGTTTTCCATATTTGTGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460600.1
CDS TCA 72 bp GCAGCCCAATCAATTTGGATCCTGTTGGTGCTGGAATaGCTGCATCCATTGTTGCTGGTTCAAGGGCCACTG +
Preference number: 6 (lower is better)
Translates to: AAQSIWILLVLE*LHPLLLVQGPL
Trigger: CAGTGGCCCTTGAACCAGCAACAATGGATGCAGTCATTCCAGCACCAACAGGATCCAAATTGATTGGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481229.2
CDS GCA 72 bp TGTTGTCAGGGGCAAATTCCCCACTGTCCTGACTGTTaGTGTCTTCAGAAGGAGGAACAATGTCCATTGGGC +
Preference number: 6 (lower is better)
Translates to: CCQGQIPHCPDC*CLQKEEQCPLG
Trigger: GCCCAATGGACATTGTTCCTCCTTCTGAAGACAGCAACAGTCAGGACAGTGGGGAATTTGCCCCTGACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000463021.1
ENST00000478777.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS GCA 72 bp CCCAATCAATTTGGATCCTGTTGGTGCTGGAATGACTaGATCCATTGTTGCTGGTTCAAGGGCCACTGCTGC +
Preference number: 6 (lower is better)
Translates to: PNQFGSCWCWND*IHCCWFKGHCC
Trigger: GCAGCAGTGGCCCTTGAACCAGCAACAATGGATGCAGTCATTCCAGCACCAACAGGATCCAAATTGATTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481229.2
CDS TCA 72 bp CATTCCTGGTGGTTGTTCTACCATGCTTTGCTGTCCTaGAGCTTCTCTTTGGGCAATCCAAGCTTGGGCCAA +
Preference number: 6 (lower is better)
Translates to: HSWWLFYHALLS*SFSLGNPSLGQ
Trigger: TTGGCCCAAGCTTGGATTGCCCAAAGAGAAGCTTCAGGACAGCAAAGCATGGTAGAACAACCACCAGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000466057.1
ENST00000478777.5
ENST00000481229.2
ENST00000492294.5
ENST00000498075.1
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS GCA 72 bp TGCAATAGAGAGACAAAGAATGCTCTCTTCCCTAGATaGCAAGTGAGGTTTCCAGAGTGTTCCCAGCCCCTG +
Preference number: 6 (lower is better)
Translates to: CNRETKNALFPR*QVRFPECSQPL
Trigger: CAGGGGCTGGGAACACTCTGGAAACCTCACTTGGCATCTAGGGAAGAGAGCATTCTTTGTCTCTCTATTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000466057.1
ENST00000498075.1
CDS CCA 72 bp TGTTCTACCATGCTTTGCTGTCCTGAAGCTTCTCTTTaGGCAATCCAAGCTTGGGCCAATGCAGCCCAATCA +
Preference number: 6 (lower is better)
Translates to: CSTMLCCPEASL*AIQAWANAAQS
Trigger: TGATTGGGCTGCATTGGCCCAAGCTTGGATTGCCCAAAGAGAAGCTTCAGGACAGCAAAGCATGGTAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000466057.1
ENST00000478777.5
ENST00000481229.2
ENST00000492294.5
ENST00000498075.1
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS CCA 72 bp TGGTTGCCAATAAGGAGGATGAAATCCACCTTGCGGTaGACCAAAAGCAGCCCCATGCTGATAGTCAAACTG +
Preference number: 6 (lower is better)
Translates to: WLPIRRMKSTLR*TKSSPMLIVKL
Trigger: CAGTTTGACTATCAGCATGGGGCTGCTTTTGGTCCACCGCAAGGTGGATTTCATCCTCCTTATTGGCAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000478777.5
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS CCA 72 bp TGGTTGCCAATAAGGAGGATGAAATCCACCTTGCGGTaGACCAAAAGCAGCCCCATGCTGAAAGAGTATTGC +
Preference number: 6 (lower is better)
Translates to: WLPIRRMKSTLR*TKSSPMLKEYC
Trigger: GCAATACTCTTTCAGCATGGGGCTGCTTTTGGTCCACCGCAAGGTGGATTTCATCCTCCTTATTGGCAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463021.1
CDS CCA 72 bp TGCTGTCCTGAAGCTTCTCTTTGGGCAATCCAAGCTTaGGCCAATGCAGCCCAATCAATTTGGATCCTGTTG +
Preference number: 6 (lower is better)
Translates to: CCPEASLWAIQA*ANAAQSIWILL
Trigger: CAACAGGATCCAAATTGATTGGGCTGCATTGGCCCAAGCTTGGATTGCCCAAAGAGAAGCTTCAGGACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481229.2
CDS TCA 72 bp CCCCTGTCAGCCTGGTTGCCACATTCTGTTGAAGTTTaGATCCCCTTGGAAATTCCCATGATTGTTTGGACC +
Preference number: 6 (lower is better)
Translates to: PLSAWLPHSVEV*IPLEIPMIVWT
Trigger: GGTCCAAACAATCATGGGAATTTCCAAGGGGATTCAAACTTCAACAGAATGTGGCAACCAGGCTGACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498075.1
CDS TCA 72 bp TTCCCAGCCCCTGTCAGCCTGGTTGCCACATTCTGTTaGAGTTTGAATCCCCTTGGAAATTCCCATGATTGT +
Preference number: 6 (lower is better)
Translates to: FPAPVSLVATFC*SLNPLGNSHDC
Trigger: ACAATCATGGGAATTTCCAAGGGGATTCAAACTTCAACAGAATGTGGCAACCAGGCTGACAGGGGCTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498075.1
CDS GCA 72 bp CCCATGCTGATAGTCAAACTGGTTCACTGGCCCCACTaGAAAATTATCGGGTGGTCCACCAAAGTTGTGATT +
Preference number: 6 (lower is better)
Translates to: PMLIVKLVHWPH*KIIGWSTKVVI
Trigger: AATCACAACTTTGGTGGACCACCCGATAATTTTGCAGTGGGGCCAGTGAACCAGTTTGACTATCAGCATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000478777.5
ENST00000481229.2
ENST00000647811.1
ENST00000681611.1
ENST00000681615.1
CDS GCA 72 bp GAGGTCCTGATAGTCAAACTGGTTCACTGGCCCCACTaGAAAATTATCGGGTGGTCCACCAAAGTTGTGATT +
Preference number: 6 (lower is better)
Translates to: EVLIVKLVHWPH*KIIGWSTKVVI
Trigger: AATCACAACTTTGGTGGACCACCCGATAATTTTGCAGTGGGGCCAGTGAACCAGTTTGACTATCAGGACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679525.1
CDS CAA 90 bp AGGGAAGCCAGTGCACTGGACTGTGCCAGCTGTTTTGCAGGAGCTTaGTATCACATCAACAACAGGAACAACATGTTAACACAAATAGCC +
Preference number: 6 (lower is better)
Translates to: REASALDCASCFAGA*YHINNRNNMLTQIA
Trigger: GGCTATTTGTGTTAACATGTTGTTCCTGTTGTTGATGTGATACAAAGCTCCTGCAAAACAGCTGGCACAGTCCAGTGCACTGGCTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460600.1
ENST00000478777.5
CDS GCA 72 bp AGGTTTCCAACTCCAGTCTTCGCAGCATTCCCAGAATaGCATACAGGTATAGTTCTATCTGCGGCAGATACT +
Preference number: 6 (lower is better)
Translates to: RFPTPVFAAFPE*HTGIVLSAADT
Trigger: AGTATCTGCCGCAGATAGAACTATACCTGTATGGCATTCTGGGAATGCTGCGAAGACTGGAGTTGGAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466057.1
CDS CCA 72 bp GGCCAGCTGCCAATACAGCTCTTTGTCTTGTTTACATaGGATCTACCATGCAAAAGTAGGGTAAGCAGATGC +
Preference number: 6 (lower is better)
Translates to: GQLPIQLFVLFT*DLPCKSRVSRC
Trigger: GCATCTGCTTACCCTACTTTTGCATGGTAGATCCCATGTAAACAAGACAAAGAGCTGTATTGGCAGCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463021.1
CDS GCA 72 bp TTTCACCTGATAGTCAAACTGGTTCACTGGCCCCACTaGAAAATTATCGGGTGGTCCACCAAAGTTGTGATT +
Preference number: 6 (lower is better)
Translates to: FHLIVKLVHWPH*KIIGWSTKVVI
Trigger: AATCACAACTTTGGTGGACCACCCGATAATTTTGCAGTGGGGCCAGTGAACCAGTTTGACTATCAGGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463021.1
CDS TCA 72 bp CATTCCCCATTCTGGTTGCCACATTCTGTTGAAGTTTaGATCCCCTTGGAAATTCCCATGATTGTTTGGACC +
Preference number: 6 (lower is better)
Translates to: HSPFWLPHSVEV*IPLEIPMIVWT
Trigger: GGTCCAAACAATCATGGGAATTTCCAAGGGGATTCAAACTTCAACAGAATGTGGCAACCAGAATGGGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000478777.5
ENST00000481229.2
ENST00000492294.5
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS CCA 72 bp ACAATATACTCTCTGGGACACACGTGTGTTATGAACTaGGACAGTAGAAATCCATGTGTGCAGCACATCCAA +
Preference number: 6 (lower is better)
Translates to: TIYSLGHTCVMN*DSRNPCVQHIQ
Trigger: TTGGATGTGCTGCACACATGGATTTCTACTGTCCCAGTTCATAACACACGTGTGTCCCAGAGAGTATATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463021.1
CDS CCA 72 bp CATTGCCTTTTCCCAGAAGAATACGCTTATTCGGGGTaGGGAGAAGTATACATTCAAACGCTTAAGGAGTTC +
Preference number: 6 (lower is better)
Translates to: HCLFPEEYAYSG*GEVYIQTLKEF
Trigger: GAACTCCTTAAGCGTTTGAATGTATACTTCTCCCCACCCCGAATAAGCGTATTCTTCTGGGAAAAGGCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460600.1
CDS CAA 72 bp GCTTTTCTAGGCCAGCTGCCAATACAGCTCTTTGTCTaGTTTACATGGGATCTACCATGCAAAAGTAGGGTA +
Preference number: 6 (lower is better)
Translates to: AFLGQLPIQLFV*FTWDLPCKSRV
Trigger: TACCCTACTTTTGCATGGTAGATCCCATGTAAACAAGACAAAGAGCTGTATTGGCAGCTGGCCTAGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463021.1
CDS GCA 72 bp ATAACCACCCAGTCCACCTTTCGTTGCTTTGCGGTGTaGATCTTTGGCTACGTAATAAATTTCTTCATCTGT +
Preference number: 6 (lower is better)
Translates to: ITTQSTFRCFAV*IFGYVINFFIC
Trigger: ACAGATGAAGAAATTTATTACGTAGCCAAAGATGCACACCGCAAAGCAACGAAAGGTGGACTGGGTGGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476159.1
CDS CCA 72 bp AAACTGGTTCACTGGCCCCACTGCAAAATTATCGGGTaGTCCACCAAAGTTGTGATTGTTCTGGTTAAATAT +
Preference number: 6 (lower is better)
Translates to: KLVHWPHCKIIG*STKVVIVLVKY
Trigger: ATATTTAACCAGAACAATCACAACTTTGGTGGACCACCCGATAATTTTGCAGTGGGGCCAGTGAACCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000463021.1
ENST00000478777.5
ENST00000481229.2
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS TCA 72 bp TTAATACAATATACTCTCTGGGACACACGTGTGTTATaGACTGGGACAGTAGAAATCCATGTGTGCAGCACA +
Preference number: 6 (lower is better)
Translates to: LIQYTLWDTRVL*TGTVEIHVCST
Trigger: TGTGCTGCACACATGGATTTCTACTGTCCCAGTTCATAACACACGTGTGTCCCAGAGAGTATATTGTATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463021.1
CDS TCA 72 bp AAACAACAAACCTGGTTGCCACATTCTGTTGAAGTTTaGATCCCCTTGGAAATTCCCATGATTGTTTGGACC +
Preference number: 6 (lower is better)
Translates to: KQQTWLPHSVEV*IPLEIPMIVWT
Trigger: GGTCCAAACAATCATGGGAATTTCCAAGGGGATTCAAACTTCAACAGAATGTGGCAACCAGGTTTGTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466057.1
CDS CAA 90 bp GAAATTCCCATGATTGTTTGGACCAGATTCCATTGTAGACATATCTaGTCCATTTGGCATCATTCCTGGTGGTTGTTCTACCATGCTTTG +
Preference number: 6 (lower is better)
Translates to: EIPMIVWTRFHCRHI*SIWHHSWWLFYHAL
Trigger: CAAAGCATGGTAGAACAACCACCAGGAATGATGCCAAATGGACAAGATATGTCTACAATGGAATCTGGTCCAAACAATCATGGGAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000466057.1
ENST00000478777.5
ENST00000481229.2
ENST00000492294.5
ENST00000498075.1
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS TCA 72 bp GAAAAAGGTAGGCGGATGGTAGGGGCAGAGTATATTTaGCAGACTAATTTGTCACACAGTGACACAATTTTT +
Preference number: 6 (lower is better)
Translates to: EKGRRMVGAEYI*QTNLSHSDTIF
Trigger: AAAAATTGTGTCACTGTGTGACAAATTAGTCTGTCAAATATACTCTGCCCCTACCATCCGCCTACCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000466057.1
ENST00000498075.1
CDS GCA 72 bp ACATGGGATCTACCATGCAAAAGTAGGGTAAGCAGATaGTCCCTGCCATTATATTTCTTCAAACAACATAAA +
Preference number: 6 (lower is better)
Translates to: TWDLPCKSRVSR*SLPLYFFKQHK
Trigger: TTTATGTTGTTTGAAGAAATATAATGGCAGGGAGCATCTGCTTACCCTACTTTTGCATGGTAGATCCCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463021.1
CDS TCA 72 bp ATTCTGTTGAAGTTTGAATCCCCTTGGAAATTCCCATaGTTGTTTGGACCAGATTCCATTGTAGACATATCT +
Preference number: 6 (lower is better)
Translates to: ILLKFESPWKFP*LFGPDSIVDIS
Trigger: AGATATGTCTACAATGGAATCTGGTCCAAACAATCATGGGAATTTCCAAGGGGATTCAAACTTCAACAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000369239.10
ENST00000438806.5
ENST00000466057.1
ENST00000478777.5
ENST00000481229.2
ENST00000492294.5
ENST00000498075.1
ENST00000647811.1
ENST00000679525.1
ENST00000681611.1
ENST00000681615.1
CDS TCA 72 bp TTTCAAAATAGAACACGCAGAGAGACAATGTATGTGTaGTTTTTCCCTTTAGGCCCTCTCACAAATATGGAA +
Preference number: 6 (lower is better)
Translates to: FQNRTRRETMYV*FFPLGPLTNME
Trigger: TTCCATATTTGTGAGAGGGCCTAAAGGGAAAAATCACACATACATTGTCTCTCTGCGTGTTCTATTTTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460600.1
CDS TCA 72 bp ACTGTGAGTTATGGGAGGTGTATTTCTTTGTCACCTTaGTTTACTTATGAGTCAAATGTACCTGTCTTCAAG +
Preference number: 6 (lower is better)
Translates to: TVSYGRCISLSP*FTYESNVPVFK
Trigger: CTTGAAGACAGGTACATTTGACTCATAAGTAAATCAAGGTGACAAAGAAATACACCTCCCATAACTCACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466057.1
CDS GCA 72 bp GAAACACCAAAATATACCTTTCGTTGCTTTGCGGTGTaGATCTTTGGCTACGTAATAAATTTCTTCATCTGT +
Preference number: 6 (lower is better)
Translates to: ETPKYTFRCFAV*IFGYVINFFIC
Trigger: ACAGATGAAGAAATTTATTACGTAGCCAAAGATGCACACCGCAAAGCAACGAAAGGTATATTTTGGTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478777.5
CDS GCA 72 bp AAAGCAAAACCAGAAACACCAAAATATACCTTTCGTTaGTTTGCGGTGTGCATCTTTGGCTACGTAATAAAT +
Preference number: 6 (lower is better)
Translates to: KAKPETPKYTFR*FAVCIFGYVIN
Trigger: ATTTATTACGTAGCCAAAGATGCACACCGCAAAGCAACGAAAGGTATATTTTGGTGTTTCTGGTTTTGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478777.5
CDS CAA 90 bp CATACAACACTATTCCCCACAGAGTTCTATGTCCCTAGGAATGAATaGGATGCTACAGAGGAAATTATATACAATTCCATTAACATGTCA +
Preference number: 6 (lower is better)
Translates to: HTTLFPTEFYVPRNE*DATEEIIYNSINMS
Trigger: TGACATGTTAATGGAATTGTATATAATTTCCTCTGTAGCATCCAATTCATTCCTAGGGACATAGAACTCTGTGGGGAATAGTGTTGTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463021.1
CDS TCA 72 bp TCTACCCACTTCTCTGGGTCCTCACAAAAATTAATTTaGAATGAAGATGTGGAAAAGGCAAATTCAAGCTTT +
Preference number: 6 (lower is better)
Translates to: STHFSGSSQKLI*NEDVEKANSSF
Trigger: AAAGCTTGAATTTGCCTTTTCCACATCTTCATTTCAAATTAATTTTTGTGAGGACCCAGAGAAGTGGGTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460600.1
CDS GCA 72 bp AAAACCAGAAACACCAAAATATACCTTTCGTTGCTTTaGGGTGTGCATCTTTGGCTACGTAATAAATTTCTT +
Preference number: 6 (lower is better)
Translates to: KTRNTKIYLSLL*GVHLWLRNKFL
Trigger: AAGAAATTTATTACGTAGCCAAAGATGCACACCGCAAAGCAACGAAAGGTATATTTTGGTGTTTCTGGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478777.5