RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PNCK (Homo sapiens)

Ensembl gene IDs: ENSG00000130822

Ensembl transcript IDs: ENST00000340888.8, ENST00000370142.5, ENST00000370145.8, ENST00000370150.5, ENST00000411968.5, ENST00000418241.5, ENST00000419804.5, ENST00000422811.5, ENST00000423545.1, ENST00000425526.5, ENST00000433470.5, ENST00000434652.5, ENST00000438984.5, ENST00000439087.5, ENST00000447676.6, ENST00000458354.5, ENST00000460106.1, ENST00000462280.1, ENST00000463548.1, ENST00000465303.5, ENST00000466074.5, ENST00000466638.5, ENST00000466662.1, ENST00000472324.5, ENST00000473680.1, ENST00000475172.5, ENST00000488168.5, ENST00000488994.5, ENST00000489536.5

Found 375 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCCCCGGCTCCCACAGCCTGCCCAGGCCCTCCTCACAGTTCCATaGCCAGGTAGAGGTGGGAAGGGCTCTCGTGGACATCCTCCAGAG +
Preference number: 1 (lower is better)
Translates to: PPRLPQPAQALLTVP*PGRGGKGSRGHPPE
Trigger: CTCTGGAGGATGTCCACGAGAGCCCTTCCCACCTCTACCTGGCCATGGAACTGTGAGGAGGGCCTGGGCAGGCTGTGGGAGCCGGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419804.5
3UTR TCA 90 bp GCATGTTCCCAGCCTGGATTTTGGAGAGTCCAAAGTCAGAGACCATaGTCTTCGAGTCCTCAAAGGGCGTGGCATACAGGAGGTTTTCGG +
Preference number: 1 (lower is better)
Translates to: ACSQPGFWRVQSQRP*SSSPQRAWHTGGFR
Trigger: CCGAAAACCTCCTGTATGCCACGCCCTTTGAGGACTCGAAGATCATGGTCTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGAACATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
3UTR-3UTR CCA 90 bp CCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCGGGGGTCAGTCCACTTaGCCTCGGCATCTGCCTGGG +
Preference number: 2 (lower is better)
Translates to: PHSAKHTTAVQERQPLRPGGQST*PRHLPG
Trigger: CCCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCC...GGGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
3UTR-3UTR TCA 90 bp GTGCAGGTAGGAGACGGCGCCAAGGACCTGACCCACCAGATGGCTGGCATCCTTAGGAGCCGCGCTCCATaGTGCGGTCAAACAGCTCGC +
Preference number: 2 (lower is better)
Translates to: VQVGDGAKDLTHQMAGILRSRAP*CGQTAR
Trigger: GCGAGCTGTTTGACCGCATCATGGAGCGCGGCTCCT...AAGGATGCCAGCCATCTGGTGGGTCAGGTCCTTGGCGCCGTCTCCTACCTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
3UTR-3UTR TCA 90 bp GCCACATATCCAGGGGTCCCACAGGCGGTGCCTAGCATGTTCCCAGCCTGGATTACGGCGCCAAGGACCTaGCCCACCAGATGGCTGGCA +
Preference number: 2 (lower is better)
Translates to: ATYPGVPQAVPSMFPAWITAPRT*PTRWLA
Trigger: TGCCAGCCATCTGGTGGGTCAGGTCCTTGGCGCCGT...AATCCAGGCTGGGAACATGCTAGGCACCGCCTGTGGGACCCCTGGATATGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
3UTR-3UTR GCA 90 bp CCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCGGACAGACTTGGGGGTaGCCCATTCCAACCCCAGCG +
Preference number: 2 (lower is better)
Translates to: PTLSEAHNSRAGKTAPEAGQTWG*PIPTPA
Trigger: CGCTGGGGTTGGAATGGGGCACCCCCAAGTCTGTCC...GGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
3UTR-3UTR TCA 90 bp TGGAAGGCCATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACAGGAAAGACAGCCCCTaGGGCCCGCCTGCCAGCACC +
Preference number: 2 (lower is better)
Translates to: WKAMTMTQAGPPTLSEAHRKDSP*GPPAST
Trigger: GGTGCTGGCAGGCGGGCCTCAGGGGCTGTCTTTCCT...GTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATGGCCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370150.5
3UTR-3UTR GCA 90 bp CCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCCCAACCCCAGCGCCATaGGCCACACCCTCAAATCTC +
Preference number: 2 (lower is better)
Translates to: PHSAKHTTAVQERQPLRPPTPAP*ATPSNL
Trigger: GAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGG...GGGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
3UTR-3UTR GCA 90 bp GCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCAACCCCAGCGCCATaGGCCACACCCTCAAATCTC +
Preference number: 2 (lower is better)
Translates to: AGPPTLSEAHNSRAGKTAPTPAP*ATPSNL
Trigger: GAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGG...GGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
3UTR-3UTR GCA 90 bp CCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGCCAACCCCAGCGCCATaGGCCACACCCTCAAATCTC +
Preference number: 2 (lower is better)
Translates to: PPTLSEAHNSRAGKTAPEPTPAP*ATPSNL
Trigger: GAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGG...CTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
3UTR-3UTR GCA 90 bp CACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCAACCCCAGCGCCATaGGCCACACCCTCAAATCTC +
Preference number: 2 (lower is better)
Translates to: HPHSAKHTTAVQERQPLRPTPAP*ATPSNL
Trigger: GAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGG...CCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
3UTR-3UTR CCA 90 bp CTGGAAGGCCATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACAGGGGGTCAGTCCACTTaGCCTCGGCATCTGCCTGGG +
Preference number: 2 (lower is better)
Translates to: LEGHDHDTSRTTHTQRSTGGQST*PRHLPG
Trigger: CCCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCC...TGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATGGCCTTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340888.8
ENST00000370142.5
3UTR-3UTR CCA 90 bp CGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCAGGGGCAAGGGAAGGAAATCTaGGGGTCAGTCCACTTGGCC +
Preference number: 2 (lower is better)
Translates to: RHAPHPQISKSSRGQPQGQGKEI*GSVHLA
Trigger: GGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTG...CCCCTGGGGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
3UTR-3UTR CCA 90 bp CCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCACAAGGGAAGGAAATCTaGGGGTCAGTCCACTTGGCC +
Preference number: 2 (lower is better)
Translates to: PAPCATPSNLKIQQRPAPQGKEI*GSVHLA
Trigger: GGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTG...TGGGGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
3UTR-3UTR TCA 90 bp CATGATCTTCGAGTCCTCAAAGGGCGTGGCATACAGGAGGTTTTCGGGCTTGAGAGGAGCCGCGCTCCATaGTGCGGTCAAACAGCTCGC +
Preference number: 2 (lower is better)
Translates to: HDLRVLKGRGIQEVFGLERSRAP*CGQTAR
Trigger: GCGAGCTGTTTGACCGCATCATGGAGCGCGGCTCCT...CTCAAGCCCGAAAACCTCCTGTATGCCACGCCCTTTGAGGACTCGAAGATCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
3UTR-3UTR CCA 90 bp AACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCAAGGGAAGGAAATCTaGGGGTCAGTCCACTTGGCC +
Preference number: 2 (lower is better)
Translates to: NPSAMRHTLKSQNPAEASQGKEI*GSVHLA
Trigger: GGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTG...GCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
3UTR-3UTR CAA 90 bp CCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCTGGGGGTCAGTCCACTaGGCCTCGGCATCTGCCTGG +
Preference number: 3 (lower is better)
Translates to: PTLSEAHNSRAGKTAPEAWGSVH*ASASAW
Trigger: CCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCA...GGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
3UTR-3UTR CAA 90 bp CCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCTGGGGGTCAGTCCACTaGGCCTCGGCATCTGCCTGG +
Preference number: 3 (lower is better)
Translates to: PHSAKHTTAVQERQPLRPWGSVH*ASASAW
Trigger: CCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCA...GGGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
CDS-3UTR TCA 90 bp CTGATCCTACGGAGCACTGCGATCTCGTTCTCCACCAGGGCCTCCTTGCCCCGGCAAGAACGGCGGAGGTaGGTTCCCCCGCCCGCCGCG +
Preference number: 4 (lower is better)
Translates to: LILRSTAISFSTRASLPRQERRR*VPPPAA
Trigger: CGCGGCGGGCGGGGGAACTCACCTCCGCCGTTCTTG...CCGGGGCAAGGAGGCCCTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458354.5
CDS-3UTR CCA 90 bp ATCCTACGGAGCACTGCGATCTCGTTCTCCACCAGGGCCTCCTTGCCCCGGAGGGCGGAGCCCCGCTCCTaGGCCAGCACCACCTCGGAG +
Preference number: 4 (lower is better)
Translates to: ILRSTAISFSTRASLPRRAEPRS*ASTTSE
Trigger: CTCCGAGGTGGTGCTGGCCCAGGAGCGGGGCTCCGC...CCTCCGGGGCAAGGAGGCCCTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419804.5
ENST00000425526.5
ENST00000458354.5
CDS-3UTR CCA 90 bp CGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCAGGGGGCGGAGCCCCGCTCCTaGGCCAGCACCACCTCGGAG +
Preference number: 4 (lower is better)
Translates to: RHAPHPQISKSSRGQPQGAEPRS*ASTTSE
Trigger: CTCCGAGGTGGTGCTGGCCCAGGAGCGGGGCTCCGC...CCCCTGGGGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp GCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCGAGGGCCACGAGGTGTaGGGAGCCCCGCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: AGPPTLSEAHNSRAGKTAEGHEV*GAPLLG
Trigger: GCCCAGGAGCGGGGCTCCGCACACCTCGTGGCCCTC...GGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp GGGCCACATATCCAGGGGTCCCACAGGCGGTGCCTAGCATGTTCCCAGCCTGGACCACCAGGGCCTCCTTaGCCCGGAGGGCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GPHIQGSHRRCLACSQPGPPGPP*PGGPSW
Trigger: CCAAGAAGGCCCTCCGGGGCAAGGAGGCCCTGGTGG...TCCAGGCTGGGAACATGCTAGGCACCGCCTGTGGGACCCCTGGATATGTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR GCA 90 bp CCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCATGGCGGGCCATGCCCTaGTCAGAGGCCCCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: PAPCATPSNLKIQQRPAPWRAMP*SEAPSP
Trigger: GGGCGAGGGGGCCTCTGAGCAGGGCATGGCCCGCCA...TGGGGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp GGACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTTGGCGGGCCATGCCCTaGTCAGAGGCCCCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: GPPTLSEAHNSRAGKTAPWRAMP*SEAPSP
Trigger: GGGCGAGGGGGCCTCTGAGCAGGGCATGGCCCGCCA...AGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp TCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGGTGGCGGGCCATGCCCTaGTCAGAGGCCCCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: SKGRKSGGQSTWPRHLPGWRAMP*SEAPSP
Trigger: GGGCGAGGGGGCCTCTGAGCAGGGCATGGCCCGCCA...CCCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR GCA 90 bp CACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGTGGCGGGCCATGCCCTaGTCAGAGGCCCCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: HPHSAKHTTAVQERQPLRWRAMP*SEAPSP
Trigger: GGGCGAGGGGGCCTCTGAGCAGGGCATGGCCCGCCA...CCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp CCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCGGCTGTGGCGGGCCATaGCCTGCTCAGAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PTLSEAHNSRAGKTAPEAGCGGP*PAQRPP
Trigger: AGGGGGCCTCTGAGCAGGGCATGGCCCGCCACAGCC...GGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp GGGGGCTGGAAGGCCATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCGGAGCCCCGCTCCTaGGCCAGCACCACCTCGGAG +
Preference number: 4 (lower is better)
Translates to: GGWKAMTMTQAGPPTLSEAEPRS*ASTTSE
Trigger: CTCCGAGGTGGTGCTGGCCCAGGAGCGGGGCTCCGC...TTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATGGCCTTCCAGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370150.5
CDS-3UTR CCA 90 bp ACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCGCGGAGCCCCGCTCCTaGGCCAGCACCACCTCGGAG +
Preference number: 4 (lower is better)
Translates to: TPAPCATPSNLKIQQRPAAEPRS*ASTTSE
Trigger: CTCCGAGGTGGTGCTGGCCCAGGAGCGGGGCTCCGC...GGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp CCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCGGCCCCCTCGCCCTCTaGGATCTGCCCCAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: PTLSEAHNSRAGKTAPEAGPLAL*DLPQLP
Trigger: CGGAAGCTGGGGCAGATCCCAGAGGGCGAGGGGGCC...GGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp GCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCGCCAGCACGGAGGCCTaGGTGGCTGTGGCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: AGPPTLSEAHNSRAGKTAASTEA*VAVAGH
Trigger: ATGGCCCGCCACAGCCACTCAGGCCTCCGTGCTGGC...GGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp TCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGGGCCAGCACGGAGGCCTaGGTGGCTGTGGCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: SKGRKSGGQSTWPRHLPGASTEA*VAVAGH
Trigger: ATGGCCCGCCACAGCCACTCAGGCCTCCGTGCTGGC...CCCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR GCA 90 bp GCCACATATCCAGGGGTCCCACAGGCGGTGCCTAGCATGTTCCCAGCCTGGATTCATGTCTGGAGCGGGTaGCGCAGCGTCGTGCCGCGC +
Preference number: 4 (lower is better)
Translates to: ATYPGVPQAVPSMFPAWIHVWSG*RSVVPR
Trigger: GCGCGGCACGACGCTGCGGCACCCGCTCCAGACATG...AATCCAGGCTGGGAACATGCTAGGCACCGCCTGTGGGACCCCTGGATATGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411968.5
CDS-3UTR GCA 90 bp TCCAACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCGAGGGCCACGAGGTGTaGGGAGCCCCGCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SNPSAMRHTLKSQNPAEAEGHEV*GAPLLG
Trigger: GCCCAGGAGCGGGGCTCCGCACACCTCGTGGCCCTC...GGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp CGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCAGGGGCCACCAGGGCCTCCTTaGCCCGGAGGGCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: RHAPHPQISKSSRGQPQGPPGPP*PGGPSW
Trigger: CCAAGAAGGCCCTCCGGGGCAAGGAGGCCCTGGTGG...CCCCTGGGGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp GCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTTGGCGGGCCATGCCCTaGTCAGAGGCCCCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: ASKGRKSGGQSTWPRHLPWRAMP*SEAPSP
Trigger: GGGCGAGGGGGCCTCTGAGCAGGGCATGGCCCGCCA...AGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR GCA 90 bp ACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCGGCTGTGGCGGGCCATaGCCTGCTCAGAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: TPAPCATPSNLKIQQRPAGCGGP*PAQRPP
Trigger: AGGGGGCCTCTGAGCAGGGCATGGCCCGCCACAGCC...GGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp CCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCCAGCAGCAGCATGTCTaGGACCCCCGCGCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PHSAKHTTAVQERQPLRPQQQHV*DPRAQP
Trigger: TGGCTGCGCGCGGGGGTCGCAGACATGCTGCTGCTG...GGGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370150.5
CDS-3UTR CCA 90 bp GACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCGCGGAGCCCCGCTCCTaGGCCAGCACCACCTCGGAG +
Preference number: 4 (lower is better)
Translates to: DRKHPREGNLGVSPLGLGAEPRS*ASTTSE
Trigger: CTCCGAGGTGGTGCTGGCCCAGGAGCGGGGCTCCGC...GCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CCA 90 bp CAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCAGGCACGGAGGCCTGAGTaGCTGTGGCGGGCCATGCCC +
Preference number: 4 (lower is better)
Translates to: QRHAPHPQISKSSRGQPQARRPE*LWRAMP
Trigger: GGGCATGGCCCGCCACAGCCACTCAGGCCTCCGTGC...CTGGGGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp CCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCACGGAGGCCTGAGTaGCTGTGGCGGGCCATGCCC +
Preference number: 4 (lower is better)
Translates to: PPTLSEAHNSRAGKTAPEARRPE*LWRAMP
Trigger: GGGCATGGCCCGCCACAGCCACTCAGGCCTCCGTGC...CTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp GGCTGGAAGGCCATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCAGCGTCCCGAGCTGCGTaGACCGAGCGCGTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GWKAMTMTQAGPPTLSEAASRAA*TERVRA
Trigger: TGCCCGCACGCGCTCGGTCCACGCAGCTCGGGACGC...TGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATGGCCTTCCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370150.5
CDS-3UTR TCA 90 bp GGGCCACATATCCAGGGGTCCCACAGGCGGTGCCTAGCATGTTCCCAGCCTGGAAGGAGCCGCGCTCCATaGTGCGGTCAAACAGCTCGC +
Preference number: 4 (lower is better)
Translates to: GPHIQGSHRRCLACSQPGRSRAP*CGQTAR
Trigger: GCGAGCTGTTTGACCGCATCATGGAGCGCGGCTCCT...TCCAGGCTGGGAACATGCTAGGCACCGCCTGTGGGACCCCTGGATATGTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR TCA 90 bp ATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGGCCAGCACGGAGGCCTaGGTGGCTGTGGCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: IQGKEIWGSVHLASASAWASTEA*VAVAGH
Trigger: ATGGCCCGCCACAGCCACTCAGGCCTCCGTGCTGGC...CCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR TCA 90 bp AACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCGCCAGCACGGAGGCCTaGGTGGCTGTGGCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: NPSAMRHTLKSQNPAEASASTEA*VAVAGH
Trigger: ATGGCCCGCCACAGCCACTCAGGCCTCCGTGCTGGC...GCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp GCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCAGGAAAGACAGCCCCTaGGGCCCGCCTGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: AGPPTLSEAHNSRAGKTARKDSP*GPPAST
Trigger: GGTGCTGGCAGGCGGGCCTCAGGGGCTGTCTTTCCT...GGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp ACTGATCCTACGGAGCACTGCGATCTCGTTCTCCACCAGGGCCTCCTTGCCCCGTGCCAGGGGTTTGGCTaGCCCAGGCACTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TDPTEHCDLVLHQGLLAPCQGFG*PRHSAW
Trigger: CCAGGCTGAGTGCCTGGGTCAGCCAAACCCCTGGCA...CGGGGCAAGGAGGCCCTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419804.5
CDS-3UTR GCA 90 bp ACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGAGGGCCACGAGGTGTaGGGAGCCCCGCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TMTQAGPPTLSEAHNSRAEGHEV*GAPLLG
Trigger: GCCCAGGAGCGGGGCTCCGCACACCTCGTGGCCCTC...TGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp ACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCACCAGGGCCTCCTTaGCCCGGAGGGCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TPAPCATPSNLKIQQRPAPPGPP*PGGPSW
Trigger: CCAAGAAGGCCCTCCGGGGCAAGGAGGCCCTGGTGG...GGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp GCCACATATCCAGGGGTCCCACAGGCGGTGCCTAGCATGTTCCCAGCCTGGATTCCACCAGGGCCTCCTTaGCCCGGAGGGCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: ATYPGVPQAVPSMFPAWIPPGPP*PGGPSW
Trigger: CCAAGAAGGCCCTCCGGGGCAAGGAGGCCCTGGTGG...AATCCAGGCTGGGAACATGCTAGGCACCGCCTGTGGGACCCCTGGATATGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR GCA 90 bp GTTGGGGTGACTGATCCTACGGAGCACTGCGATCTCGTTCTCCACCAGGGCCTCCCACCAGGGCCTCCTTaGCCCGGAGGGCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: VGVTDPTEHCDLVLHQGLPPGPP*PGGPSW
Trigger: CCAAGAAGGCCCTCCGGGGCAAGGAGGCCCTGGTGG...GAGGCCCTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATCAGTCACCCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419804.5
ENST00000425526.5
ENST00000458354.5
CDS-3UTR GCA 90 bp ATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGGGCTGTGGCGGGCCATaGCCTGCTCAGAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: IQGKEIWGSVHLASASAWGCGGP*PAQRPP
Trigger: AGGGGGCCTCTGAGCAGGGCATGGCCCGCCACAGCC...CCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR GCA 90 bp GCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGCTGTGGCGGGCCATaGCCTGCTCAGAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: ASKGRKSGGQSTWPRHLPGCGGP*PAQRPP
Trigger: AGGGGGCCTCTGAGCAGGGCATGGCCCGCCACAGCC...AGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR GCA 90 bp CACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCGCCGGACAGACTTGGGGGTaGCCCATTCCAACCCCAGCG +
Preference number: 4 (lower is better)
Translates to: HSAKHTTAVQERQPLRPAGQTWG*PIPTPA
Trigger: CGCTGGGGTTGGAATGGGGCACCCCCAAGTCTGTCC...GGCGGGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp GACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCCCCCTGAGGCCCGCCTaGCAGCACCCCCTCGGCTTT +
Preference number: 4 (lower is better)
Translates to: DRKHPREGNLGVSPLGLGPLRPA*QHPLGF
Trigger: AAAGCCGAGGGGGTGCTGGCAGGCGGGCCTCAGGGG...GCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp TCCAACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCCCCCTGAGGCCCGCCTaGCAGCACCCCCTCGGCTTT +
Preference number: 4 (lower is better)
Translates to: SNPSAMRHTLKSQNPAEAPLRPA*QHPLGF
Trigger: AAAGCCGAGGGGGTGCTGGCAGGCGGGCCTCAGGGG...GGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp GGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGGGCCCCCTCGCCCTCTaGGATCTGCCCCAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: GPKASKGRKSGGQSTWPRGPLAL*DLPQLP
Trigger: CGGAAGCTGGGGCAGATCCCAGAGGGCGAGGGGGCC...CCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CCA 90 bp TCCAACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCGGCCCCCTCGCCCTCTaGGATCTGCCCCAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: SNPSAMRHTLKSQNPAEAGPLAL*DLPQLP
Trigger: CGGAAGCTGGGGCAGATCCCAGAGGGCGAGGGGGCC...GGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp GCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGCCCCCTCGCCCTCTaGGATCTGCCCCAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: ASKGRKSGGQSTWPRHLPGPLAL*DLPQLP
Trigger: CGGAAGCTGGGGCAGATCCCAGAGGGCGAGGGGGCC...AGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR CCA 90 bp GCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGCACGGAGGCCTGAGTaGCTGTGGCGGGCCATGCCC +
Preference number: 4 (lower is better)
Translates to: ASKGRKSGGQSTWPRHLPARRPE*LWRAMP
Trigger: GGGCATGGCCCGCCACAGCCACTCAGGCCTCCGTGC...AGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR CCA 90 bp CTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCGCCTGGGGGGTCAGTCCACTTaGCCTCGGCATCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: LSEAHNSRAGKTAPEARLGGQST*PRHLGI
Trigger: GATGCCCAGATGCCGAGGCCAAGTGGACTGACCCCC...CAGGCGGGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000370150.5
CDS-3UTR TCA 90 bp CGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCAGGGGAGGAGCCGCGCTCCATaGTGCGGTCAAACAGCTCGC +
Preference number: 4 (lower is better)
Translates to: RHAPHPQISKSSRGQPQGRSRAP*CGQTAR
Trigger: GCGAGCTGTTTGACCGCATCATGGAGCGCGGCTCCT...CCCCTGGGGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp CCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCAGGAGCCGCGCTCCATaGTGCGGTCAAACAGCTCGC +
Preference number: 4 (lower is better)
Translates to: PHSAKHTTAVQERQPLRPRSRAP*CGQTAR
Trigger: GCGAGCTGTTTGACCGCATCATGGAGCGCGGCTCCT...GGGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp AGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCAGGAAAGACAGCCCCTaGGGCCCGCCTGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: SIQGKEIWGSVHLASASARKDSP*GPPAST
Trigger: GGTGCTGGCAGGCGGGCCTCAGGGGCTGTCTTTCCT...GGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
CDS-3UTR TCA 90 bp ACTGATCCTACGGAGCACTGCGATCTCGTTCTCCACCAGGGCCTCCTTGCCCCGCAGCAGCAGCATGTCTaGAGAGCTGGTCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: TDPTEHCDLVLHQGLLAPQQQHV*RAGPGL
Trigger: GAGGCCGGGACCAGCTCTTCAGACATGCTGCTGCTG...CGGGGCAAGGAGGCCCTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419804.5
CDS-3UTR GCA 90 bp CATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGCATGTCTGGAGCGGGTaGCGCAGCGTCGTGCCGCGC +
Preference number: 4 (lower is better)
Translates to: HDHDTSRTTHTQRSTQQPHVWSG*RSVVPR
Trigger: GCGCGGCACGACGCTGCGGCACCCGCTCCAGACATG...CGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340888.8
CDS-3UTR GCA 90 bp CGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCAGGGGGGGTCCCACAGGCGGTaGCTAGCATGTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: RHAPHPQISKSSRGQPQGGSHRR*LACSQP
Trigger: AGGCTGGGAACATGCTAGGCACCGCCTGTGGGACCC...CCCCTGGGGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp CCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCGGGTCCCACAGGCGGTaGCTAGCATGTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PHSAKHTTAVQERQPLRPGSHRR*LACSQP
Trigger: AGGCTGGGAACATGCTAGGCACCGCCTGTGGGACCC...GGGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp CCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCTCGCCCTCTGGGATCTaGCCCAGCTTCCGGATGTGG +
Preference number: 4 (lower is better)
Translates to: PTLSEAHNSRAGKTAPEASPSGI*PSFRMW
Trigger: CCACATCCGGAAGCTGGGGCAGATCCCAGAGGGCGA...GGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp CCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGGCGGACAGACTTGGGGGTaGCCCATTCCAACCCCAGCG +
Preference number: 4 (lower is better)
Translates to: PREGNLGVSPLGLGICLGGQTWG*PIPTPA
Trigger: CGCTGGGGTTGGAATGGGGCACCCCCAAGTCTGTCC...GCCCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
CDS-3UTR GCA 90 bp CCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCGGACAGACTTGGGGGTaGCCCATTCCAACCCCAGCG +
Preference number: 4 (lower is better)
Translates to: PHSAKHTTAVQERQPLRPGQTWG*PIPTPA
Trigger: CGCTGGGGTTGGAATGGGGCACCCCCAAGTCTGTCC...GGGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp CTGGAAGGCCATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACCCCTGAGGCCCGCCTaGCAGCACCCCCTCGGCTTT +
Preference number: 4 (lower is better)
Translates to: LEGHDHDTSRTTHTQRSTPLRPA*QHPLGF
Trigger: AAAGCCGAGGGGGTGCTGGCAGGCGGGCCTCAGGGG...TGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATGGCCTTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370150.5
CDS-3UTR GCA 90 bp TCCCACAGGCGGTGCCTAGCATGTTCCCAGCCTGGATTTTGGAGAGTCCAAAGTGAGGGCCACGAGGTGTaGGGAGCCCCGCTCGAGCCG +
Preference number: 4 (lower is better)
Translates to: SHRRCLACSQPGFWRVQSEGHEV*GAPLEP
Trigger: CGGCTCGAGCGGGGCTCCGCACACCTCGTGGCCCTC...ACTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCTAGGCACCGCCTGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411968.5
CDS-3UTR CCA 90 bp GATCCTACGGAGCACTGCGATCTCGTTCTCCACCAGGGCCTCCTTGCCCCGGAGTGGGAAGGGCTCTCGTaGACATCCTCCAGAGCGACG +
Preference number: 4 (lower is better)
Translates to: DPTEHCDLVLHQGLLAPEWEGLS*TSSRAT
Trigger: CGTCGCTCTGGAGGATGTCCACGAGAGCCCTTCCCA...CTCCGGGGCAAGGAGGCCCTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419804.5
ENST00000458354.5
CDS-3UTR CCA 90 bp CTGGAAGGCCATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACAGCACGGAGGCCTGAGTaGCTGTGGCGGGCCATGCCC +
Preference number: 4 (lower is better)
Translates to: LEGHDHDTSRTTHTQRSTARRPE*LWRAMP
Trigger: GGGCATGGCCCGCCACAGCCACTCAGGCCTCCGTGC...TGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATGGCCTTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370150.5
CDS-3UTR CCA 90 bp GACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGCTGGGCATCACCACTTaGGGGGCTGGCCAGCACGGA +
Preference number: 4 (lower is better)
Translates to: DHPHSAKHTTAVQERQPLLGITT*GAGQHG
Trigger: TCCGTGCTGGCCAGCCCCCCAAGTGGTGATGCCCAG...CAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp GACGATGTTGGGGTGACTGATCCTACGGAGCACTGCGATCTCGTTCTCCACCAGCGCCACCCGTCACCCTaGGGGTGCCAGGGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: DDVGVTDPTEHCDLVLHQRHPSP*GCQGFG
Trigger: GCCAAACCCCTGGCACCCCCAGGGTGACGGGTGGCG...CTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATCAGTCACCCCAACATCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419804.5
CDS-3UTR CCA 90 bp GGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGGCTCCCGGCACTCACTaGGCTCCCTCTGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: GPKASKGRKSGGQSTWPRAPGTH*APSGST
Trigger: GGTGGAGCCAGAGGGAGCCCAGTGAGTGCCGGGAGC...CCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447676.6
CDS-3UTR TCA 90 bp CTGATCCTACGGAGCACTGCGATCTCGTTCTCCACCAGGGCCTCCTTGCCCCGGGCGACGATGTTGGGGTaGCTGATCCTACGGAGCACT +
Preference number: 4 (lower is better)
Translates to: LILRSTAISFSTRASLPRATMLG*LILRST
Trigger: AGTGCTCCGTAGGATCAGTCACCCCAACATCGTCGC...CCGGGGCAAGGAGGCCCTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419804.5
ENST00000425526.5
ENST00000458354.5
CDS-3UTR TCA 90 bp GCCACATATCCAGGGGTCCCACAGGCGGTGCCTAGCATGTTCCCAGCCTGGATTAGGAGCCGCGCTCCATaGTGCGGTCAAACAGCTCGC +
Preference number: 4 (lower is better)
Translates to: ATYPGVPQAVPSMFPAWIRSRAP*CGQTAR
Trigger: GCGAGCTGTTTGACCGCATCATGGAGCGCGGCTCCT...AATCCAGGCTGGGAACATGCTAGGCACCGCCTGTGGGACCCCTGGATATGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR TCA 90 bp CATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGACGGCGCCAAGGACCTaGCCCACCAGATGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HDTSRTTHTQRSTQQPCRTAPRT*PTRWLA
Trigger: TGCCAGCCATCTGGTGGGTCAGGTCCTTGGCGCCGT...CCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp ATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGACGGCGCCAAGGACCTaGCCCACCAGATGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: IQGKEIWGSVHLASASAWTAPRT*PTRWLA
Trigger: TGCCAGCCATCTGGTGGGTCAGGTCCTTGGCGCCGT...CCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR TCA 90 bp AGAGCTCTGGGGCCACATATCCAGGGGTCCCACAGGCGGTGCCTAGCATGTTCCGCAGGATGTAGGAGATaGCGCCCAGGGCCCACACAT +
Preference number: 4 (lower is better)
Translates to: RALGPHIQGSHRRCLACSAGCRR*RPGPTH
Trigger: ATGTGTGGGCCCTGGGCGTCATCTCCTACATCCTGC...GGAACATGCTAGGCACCGCCTGTGGGACCCCTGGATATGTGGCCCCAGAGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433470.5
CDS-3UTR TCA 90 bp CCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGGCCCCTCAGGATCTGGCTaGAGAGCTCAGGGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: PREGNLGVSPLGLGICLGPSGSG*RAQGRS
Trigger: AGAGCGACCCTGAGCTCTTCAGCCAGATCCTGAGGG...GCCCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR TCA 90 bp CCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCAGGCCTGTTGGCAGGTaGACCTCTTCTGGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PHSAKHTTAVQERQPLRPRPVGR*TSSGGL
Trigger: GAGACCCCCAGAAGAGGTTCACCTGCCAACAGGCCT...GGGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp GACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCTCTCCGAGGACAGGCTaGCCCGGCCACTTGCCCGAA +
Preference number: 4 (lower is better)
Translates to: DRKHPREGNLGVSPLGLGSPRTG*PGHLPE
Trigger: TTCGGGCAAGTGGCCGGGTCAGCCTGTCCTCGGAGA...GCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447676.6
CDS-3UTR GCA 90 bp ACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGTGCACCACCAGGGCCTCCTTaGCCCGGAGGGCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TMTQAGPPTLSEAHNSRAPPGPP*PGGPSW
Trigger: CCAAGAAGGCCCTCCGGGGCAAGGAGGCCCTGGTGG...TGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp CATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGCCACCAGGGCCTCCTTaGCCCGGAGGGCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: HDHDTSRTTHTQRSTQQPPPGPP*PGGPSW
Trigger: CCAAGAAGGCCCTCCGGGGCAAGGAGGCCCTGGTGG...CGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp GACGATGTTGGGGTGACTGATCCTACGGAGCACTGCGATCTCGTTCTCCACCAGCCACCAGGGCCTCCTTaGCCCGGAGGGCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: DDVGVTDPTEHCDLVLHQPPGPP*PGGPSW
Trigger: CCAAGAAGGCCCTCCGGGGCAAGGAGGCCCTGGTGG...CTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATCAGTCACCCCAACATCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419804.5
ENST00000425526.5
ENST00000458354.5
CDS-3UTR GCA 90 bp ACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCGGGTCCCACAGGCGGTaGCTAGCATGTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: TPAPCATPSNLKIQQRPAGSHRR*LACSQP
Trigger: AGGCTGGGAACATGCTAGGCACCGCCTGTGGGACCC...GGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp GGGGGCTGGAAGGCCATGACCATGACACAAGCAGGACCACCCACACTCAGCGAATCGCCCTCTGGGATCTaGCCCAGCTTCCGGATGTGG +
Preference number: 4 (lower is better)
Translates to: GGWKAMTMTQAGPPTLSESPSGI*PSFRMW
Trigger: CCACATCCGGAAGCTGGGGCAGATCCCAGAGGGCGA...TTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATGGCCTTCCAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370150.5
CDS-3UTR GCA 90 bp GGGGGCTGGAAGGCCATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGGACAGACTTGGGGGTaGCCCATTCCAACCCCAGCG +
Preference number: 4 (lower is better)
Translates to: GGWKAMTMTQAGPPTLSEGQTWG*PIPTPA
Trigger: CGCTGGGGTTGGAATGGGGCACCCCCAAGTCTGTCC...TTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATGGCCTTCCAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370150.5
CDS-3UTR GCA 90 bp AAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCCTGCACCACAGCTCTaGCACCCTGGGCTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: KHPREGNLGVSPLGLGICPAPQL*HPGLPA
Trigger: TGCCGGGAGCCCAGGGTGGCAGAGCTGTGGTGCAGG...GCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447676.6
CDS-3UTR CCA 90 bp GTGCAGGTAGGAGACGGCGCCAAGGACCTGACCCACCAGATGGCTGGCATCCTTTGGGAAGGGCTCTCGTaGACATCCTCCAGAGCGACG +
Preference number: 4 (lower is better)
Translates to: VQVGDGAKDLTHQMAGILWEGLS*TSSRAT
Trigger: CGTCGCTCTGGAGGATGTCCACGAGAGCCCTTCCCA...AAGGATGCCAGCCATCTGGTGGGTCAGGTCCTTGGCGCCGTCTCCTACCTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR CCA 90 bp CACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCGCCCCGTCACCAGTTCCATaGCCAGGTAGAGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: HSAKHTTAVQERQPLRPAPSPVP*PGRGGK
Trigger: CTTCCCACCTCTACCTGGCCATGGAACTGGTGACGG...GGCGGGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp CAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCAGCCCAGCTTCCGGATGTaGCGCAGGAACGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QRHAPHPQISKSSRGQPQPSFRM*RRNEVA
Trigger: TGCCACCTCGTTCCTGCGCCACATCCGGAAGCTGGG...CTGGGGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp AACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCTGGGCATCACCACTTaGGGGGCTGGCCAGCACGGA +
Preference number: 4 (lower is better)
Translates to: NPSAMRHTLKSQNPAEASLGITT*GAGQHG
Trigger: TCCGTGCTGGCCAGCCCCCCAAGTGGTGATGCCCAG...GCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp ATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGCTGGGCATCACCACTTaGGGGGCTGGCCAGCACGGA +
Preference number: 4 (lower is better)
Translates to: IQGKEIWGSVHLASASAWLGITT*GAGQHG
Trigger: TCCGTGCTGGCCAGCCCCCCAAGTGGTGATGCCCAG...CCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR CCA 90 bp GGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGGGGGGTCAGTCCACTTaGCCTCGGCATCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GPKASKGRKSGGQSTWPRGGQST*PRHLPG
Trigger: CCCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCC...CCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR CCA 90 bp TCCTACGGAGCACTGCGATCTCGTTCTCCACCAGGGCCTCCTTGCCCCGGAGGGCTCCTCACAGTTCCATaGCCAGGTAGAGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SYGALRSRSPPGPPCPGGLLTVP*PGRGGK
Trigger: CTTCCCACCTCTACCTGGCCATGGAACTGTGAGGAG...CCCTCCGGGGCAAGGAGGCCCTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419804.5
ENST00000458354.5
CDS-3UTR CCA 90 bp GATGTTGGGGTGACTGATCCTACGGAGCACTGCGATCTCGTTCTCCACCAGGGCGGGGTGCCAGGGGTTTaGCTGACCCAGGCACTCAGC +
Preference number: 4 (lower is better)
Translates to: DVGVTDPTEHCDLVLHQGGVPGV*LTQALS
Trigger: GCTGAGTGCCTGGGTCAGCCAAACCCCTGGCACCCC...GCCCTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATCAGTCACCCCAACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419804.5
CDS-3UTR CCA 90 bp GACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCACAGCTCTGCCACCCTaGGCTCCCGGCACTCACTGG +
Preference number: 4 (lower is better)
Translates to: DRKHPREGNLGVSPLGLGTALPP*APGTHW
Trigger: CCAGTGAGTGCCGGGAGCCCAGGGTGGCAGAGCTGT...GCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447676.6
CDS-3UTR TCA 90 bp CCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGGCGCGACGATGTTGGGGTaGCTGATCCTACGGAGCACT +
Preference number: 4 (lower is better)
Translates to: PREGNLGVSPLGLGICLGATMLG*LILRST
Trigger: AGTGCTCCGTAGGATCAGTCACCCCAACATCGTCGC...GCCCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR TCA 90 bp CATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAGGAGCCGCGCTCCATaGTGCGGTCAAACAGCTCGC +
Preference number: 4 (lower is better)
Translates to: HDTSRTTHTQRSTQQPCRRSRAP*CGQTAR
Trigger: GCGAGCTGTTTGACCGCATCATGGAGCGCGGCTCCT...CCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp AGGGGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTACGGCGCCAAGGACCTaGCCCACCAGATGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RGPKASKGRKSGGQSTWPTAPRT*PTRWLA
Trigger: TGCCAGCCATCTGGTGGGTCAGGTCCTTGGCGCCGT...AGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR TCA 90 bp CCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCAGGATGTAGGAGATaGCGCCCAGGGCCCACACAT +
Preference number: 4 (lower is better)
Translates to: PPTLSEAHNSRAGKTAPEAGCRR*RPGPTH
Trigger: ATGTGTGGGCCCTGGGCGTCATCTCCTACATCCTGC...CTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp TCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGGGCAGGATGTAGGAGATaGCGCCCAGGGCCCACACAT +
Preference number: 4 (lower is better)
Translates to: SKGRKSGGQSTWPRHLPGAGCRR*RPGPTH
Trigger: ATGTGTGGGCCCTGGGCGTCATCTCCTACATCCTGC...CCCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR TCA 90 bp GGGGGCTGGAAGGCCATGACCATGACACAAGCAGGACCACCCACACTCAGCGAACCCTCAGGATCTGGCTaGAGAGCTCAGGGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: GGWKAMTMTQAGPPTLSEPSGSG*RAQGRS
Trigger: AGAGCGACCCTGAGCTCTTCAGCCAGATCCTGAGGG...TTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATGGCCTTCCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370150.5
CDS-3UTR TCA 90 bp ACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCCTCAGGATCTGGCTaGAGAGCTCAGGGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: TPAPCATPSNLKIQQRPAPSGSG*RAQGRS
Trigger: AGAGCGACCCTGAGCTCTTCAGCCAGATCCTGAGGG...GGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp GACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCTGTTGGCAGGTaGACCTCTTCTGGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: DHPHSAKHTTAVQERQPLRPVGR*TSSGGL
Trigger: GAGACCCCCAGAAGAGGTTCACCTGCCAACAGGCCT...CAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp CCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCGGAACGAGGTGGCATTaGAGGCTCGCTTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: PHSAKHTTAVQERQPLRPGTRWH*RLASSV
Trigger: CACACTGGAAGCGAGCCTTCAATGCCACCTCGTTCC...GGGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp CCATTCCAACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAAGGAAAGACAGCCCCTaGGGCCCGCCTGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: PFQPQRHAPHPQISKSSRRKDSP*GPPAST
Trigger: GGTGCTGGCAGGCGGGCCTCAGGGGCTGTCTTTCCT...TCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGGAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp AAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCACCAGGGCCTCCTTaGCCCGGAGGGCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: KASKGRKSGGQSTWPRHLPPGPP*PGGPSW
Trigger: CCAAGAAGGCCCTCCGGGGCAAGGAGGCCCTGGTGG...CAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR GCA 90 bp GCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGGTCCCACAGGCGGTaGCTAGCATGTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ASKGRKSGGQSTWPRHLPGSHRR*LACSQP
Trigger: AGGCTGGGAACATGCTAGGCACCGCCTGTGGGACCC...AGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR GCA 90 bp CCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCCAGAGATCCAAAGGTaGCGCAAGGCCTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PTLSEAHNSRAGKTAPEAPEIQR*RKACWQ
Trigger: CTGCCAACAGGCCTTGCGGCACCTTTGGATCTCTGG...GGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp GGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGTCGCCCTCTGGGATCTaGCCCAGCTTCCGGATGTGG +
Preference number: 4 (lower is better)
Translates to: GPKASKGRKSGGQSTWPRSPSGI*PSFRMW
Trigger: CCACATCCGGAAGCTGGGGCAGATCCCAGAGGGCGA...CCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR GCA 90 bp GACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCTCGCCCTCTGGGATCTaGCCCAGCTTCCGGATGTGG +
Preference number: 4 (lower is better)
Translates to: DRKHPREGNLGVSPLGLGSPSGI*PSFRMW
Trigger: CCACATCCGGAAGCTGGGGCAGATCCCAGAGGGCGA...GCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR GCA 90 bp CCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCACCAACCCCAGCGCCATaGGCCACACCCTCAAATCTC +
Preference number: 4 (lower is better)
Translates to: PAPCATPSNLKIQQRPAPPTPAP*ATPSNL
Trigger: GAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGG...TGGGGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp GCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGCTGACCCGGCCACTTaGCCGAAAGCAGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: ASKGRKSGGQSTWPRHLPADPAT*PKAASM
Trigger: CATGGAGGCTGCTTTCGGGCAAGTGGCCGGGTCAGC...AGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447676.6
CDS-3UTR GCA 90 bp TCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGGCTGCCTTCCAGTCTCTaGCTTCACCGCCTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: SKGRKSGGQSTWPRHLPGLPSSL*LHRLSE
Trigger: CTCGGAGAGGCGGTGAAGGCAGAGACTGGAAGGCAG...CCCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447676.6
CDS-3UTR CCA 90 bp CCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCATGGGAAGGGCTCTCGTaGACATCCTCCAGAGCGACG +
Preference number: 4 (lower is better)
Translates to: PAPCATPSNLKIQQRPAPWEGLS*TSSRAT
Trigger: CGTCGCTCTGGAGGATGTCCACGAGAGCCCTTCCCA...TGGGGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp TCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGGTGGGAAGGGCTCTCGTaGACATCCTCCAGAGCGACG +
Preference number: 4 (lower is better)
Translates to: SKGRKSGGQSTWPRHLPGWEGLS*TSSRAT
Trigger: CGTCGCTCTGGAGGATGTCCACGAGAGCCCTTCCCA...CCCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR CCA 90 bp CCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCCCGTCACCAGTTCCATaGCCAGGTAGAGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PHSAKHTTAVQERQPLRPPSPVP*PGRGGK
Trigger: CTTCCCACCTCTACCTGGCCATGGAACTGGTGACGG...GGGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp TGTGCAGGTAGGAGACGGCGCCAAGGACCTGACCCACCAGATGGCTGGCATCCTCCGTCACCAGTTCCATaGCCAGGTAGAGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: CAGRRRRQGPDPPDGWHPPSPVP*PGRGGK
Trigger: CTTCCCACCTCTACCTGGCCATGGAACTGGTGACGG...AGGATGCCAGCCATCTGGTGGGTCAGGTCCTTGGCGCCGTCTCCTACCTGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR CCA 90 bp GACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGCTGGCCCTCAGGATCTaGCTGAAGAGCTCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: DHPHSAKHTTAVQERQPLLALRI*LKSSGS
Trigger: CGACCCTGAGCTCTTCAGCCAGATCCTGAGGGCCAG...CAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp GGACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTCTGGCCCTCAGGATCTaGCTGAAGAGCTCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: GPPTLSEAHNSRAGKTAPLALRI*LKSSGS
Trigger: CGACCCTGAGCTCTTCAGCCAGATCCTGAGGGCCAG...AGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp TCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGGCTGGCCCTCAGGATCTaGCTGAAGAGCTCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: SKGRKSGGQSTWPRHLPGLALRI*LKSSGS
Trigger: CGACCCTGAGCTCTTCAGCCAGATCCTGAGGGCCAG...CCCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR CCA 90 bp CCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCCAGGTGAACCTCTTCTaGGGGTCTCGCTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PHSAKHTTAVQERQPLRPQVNLF*GSRSRR
Trigger: CCTTCTGGAGCGAGACCCCCAGAAGAGGTTCACCTG...GGGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp CATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGCCCAGCTTCCGGATGTaGCGCAGGAACGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: HDTSRTTHTQRSTQQPCRPSFRM*RRNEVA
Trigger: TGCCACCTCGTTCCTGCGCCACATCCGGAAGCTGGG...CCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp GGGAGGGGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCCAGCTTCCGGATGTaGCGCAGGAACGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GRGPKASKGRKSGGQSTWPSFRM*RRNEVA
Trigger: TGCCACCTCGTTCCTGCGCCACATCCGGAAGCTGGG...CCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CCA 90 bp ACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGTGCACTGGGCATCACCACTTaGGGGGCTGGCCAGCACGGA +
Preference number: 4 (lower is better)
Translates to: TMTQAGPPTLSEAHNSRALGITT*GAGQHG
Trigger: TCCGTGCTGGCCAGCCCCCCAAGTGGTGATGCCCAG...TGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp CATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGGGGGGTCAGTCCACTTaGCCTCGGCATCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: HDHDTSRTTHTQRSTQQPGGQST*PRHLPG
Trigger: CCCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCC...CGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
CDS-3UTR CCA 90 bp CTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCGCCTGCAAGGGAAGGAAATCTaGGGGTCAGTCCACTTGGCC +
Preference number: 4 (lower is better)
Translates to: LSEAHNSRAGKTAPEARLQGKEI*GSVHLA
Trigger: GGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTG...CAGGCGGGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp ACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCGCCGCTCAGTGTCACTaGCTCGGCATATCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: TPAPCATPSNLKIQQRPAAAQCH*LGISRG
Trigger: ACCCCTGGATATGCCGAGCCAGTGACACTGAGCGGC...GGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370142.5
CDS-3UTR CCA 90 bp GCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTCCTTTGCACCACCGGTaGCTGTCTCCCGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: ASKGRKSGGQSTWPRHLPPLHHR*LSPGEL
Trigger: GAGCTCTCCGGGAGACAGCCACCGGTGGTGCAAAGG...AGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447676.6
CDS-3UTR TCA 90 bp GACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGGCGACGATGTTGGGGTaGCTGATCCTACGGAGCACT +
Preference number: 4 (lower is better)
Translates to: DHPHSAKHTTAVQERQPLATMLG*LILRST
Trigger: AGTGCTCCGTAGGATCAGTCACCCCAACATCGTCGC...CAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp TCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGGGCGACGATGTTGGGGTaGCTGATCCTACGGAGCACT +
Preference number: 4 (lower is better)
Translates to: SKGRKSGGQSTWPRHLPGATMLG*LILRST
Trigger: AGTGCTCCGTAGGATCAGTCACCCCAACATCGTCGC...CCCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR TCA 90 bp AGGGGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTAGGAGCCGCGCTCCATaGTGCGGTCAAACAGCTCGC +
Preference number: 4 (lower is better)
Translates to: RGPKASKGRKSGGQSTWPRSRAP*CGQTAR
Trigger: GCGAGCTGTTTGACCGCATCATGGAGCGCGGCTCCT...AGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR TCA 90 bp CCATTCCAACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAACGGCGCCAAGGACCTaGCCCACCAGATGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PFQPQRHAPHPQISKSSRTAPRT*PTRWLA
Trigger: TGCCAGCCATCTGGTGGGTCAGGTCCTTGGCGCCGT...TCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGGAATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp AAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGACGGCGCCAAGGACCTaGCCCACCAGATGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: KASKGRKSGGQSTWPRHLTAPRT*PTRWLA
Trigger: TGCCAGCCATCTGGTGGGTCAGGTCCTTGGCGCCGT...CAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR TCA 90 bp CCACAGGCGGTGCCTAGCATGTTCCCAGCCTGGATTTTGGAGAGTCCAAAGTCAACGGCGCCAAGGACCTaGCCCACCAGATGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PQAVPSMFPAWILESPKSTAPRT*PTRWLA
Trigger: TGCCAGCCATCTGGTGGGTCAGGTCCTTGGCGCCGT...TGACTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCTAGGCACCGCCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR TCA 90 bp TCCCACAGGCGGTGCCTAGCATGTTCCCAGCCTGGATTTTGGAGAGTCCAAAGTACGGCGCCAAGGACCTaGCCCACCAGATGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SHRRCLACSQPGFWRVQSTAPRT*PTRWLA
Trigger: TGCCAGCCATCTGGTGGGTCAGGTCCTTGGCGCCGT...ACTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCTAGGCACCGCCTGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR TCA 90 bp ATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGGCAGGATGTAGGAGATaGCGCCCAGGGCCCACACAT +
Preference number: 4 (lower is better)
Translates to: IQGKEIWGSVHLASASAWAGCRR*RPGPTH
Trigger: ATGTGTGGGCCCTGGGCGTCATCTCCTACATCCTGC...CCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR TCA 90 bp AGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCGCAGGATGTAGGAGATaGCGCCCAGGGCCCACACAT +
Preference number: 4 (lower is better)
Translates to: SIQGKEIWGSVHLASASAAGCRR*RPGPTH
Trigger: ATGTGTGGGCCCTGGGCGTCATCTCCTACATCCTGC...GGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR TCA 90 bp GCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTCCCTCAGGATCTGGCTaGAGAGCTCAGGGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: ASKGRKSGGQSTWPRHLPPSGSG*RAQGRS
Trigger: AGAGCGACCCTGAGCTCTTCAGCCAGATCCTGAGGG...AGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR TCA 90 bp AACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCAGGCCTGTTGGCAGGTaGACCTCTTCTGGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: NPSAMRHTLKSQNPAEASRPVGR*TSSGGL
Trigger: GAGACCCCCAGAAGAGGTTCACCTGCCAACAGGCCT...GCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp GGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGAGGCCTGTTGGCAGGTaGACCTCTTCTGGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: GPKASKGRKSGGQSTWPRRPVGR*TSSGGL
Trigger: GAGACCCCCAGAAGAGGTTCACCTGCCAACAGGCCT...CCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR TCA 90 bp GGGGGCTGGAAGGCCATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGGAACGAGGTGGCATTaGAGGCTCGCTTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GGWKAMTMTQAGPPTLSEGTRWH*RLASSV
Trigger: CACACTGGAAGCGAGCCTTCAATGCCACCTCGTTCC...TTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATGGCCTTCCAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370150.5
CDS-3UTR GCA 90 bp GTCCCACAGGCGGTGCCTAGCATGTTCCCAGCCTGGATTTTGGAGAGTCCAAAGGGGTCCCACAGGCGGTaGCTAGCATGTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: VPQAVPSMFPAWILESPKGSHRR*LACSQP
Trigger: AGGCTGGGAACATGCTAGGCACCGCCTGTGGGACCC...CTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCTAGGCACCGCCTGTGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR GCA 90 bp ATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGCCAACCCCAGCGCCATaGGCCACACCCTCAAATCTC +
Preference number: 4 (lower is better)
Translates to: IQGKEIWGSVHLASASAWPTPAP*ATPSNL
Trigger: GAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGG...CCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
CDS-3UTR GCA 90 bp GCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGCACACACGCAGCCATaGCGCTCAGTGTCACTGGCT +
Preference number: 4 (lower is better)
Translates to: ASKGRKSGGQSTWPRHLPAHTQP*RSVSLA
Trigger: AGCCAGTGACACTGAGCGGCATGGCTGCGTGTGTGC...AGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370142.5
CDS-3UTR GCA 90 bp GGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCGAAAGCAGCCTCCATaGCTAGCTCCAGGACCCTGC +
Preference number: 4 (lower is better)
Translates to: GPKASKGRKSGGQSTWPRRKQPP*LAPGPC
Trigger: GCAGGGTCCTGGAGCTAGGCATGGAGGCTGCTTTCG...CCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447676.6
CDS-3UTR CCA 90 bp GGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGTGGGAAGGGCTCTCGTaGACATCCTCCAGAGCGACG +
Preference number: 4 (lower is better)
Translates to: GPKASKGRKSGGQSTWPRWEGLS*TSSRAT
Trigger: CGTCGCTCTGGAGGATGTCCACGAGAGCCCTTCCCA...CCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CCA 90 bp GATGTTGGGGTGACTGATCCTACGGAGCACTGCGATCTCGTTCTCCACCAGGGCTGGGAAGGGCTCTCGTaGACATCCTCCAGAGCGACG +
Preference number: 4 (lower is better)
Translates to: DVGVTDPTEHCDLVLHQGWEGLS*TSSRAT
Trigger: CGTCGCTCTGGAGGATGTCCACGAGAGCCCTTCCCA...GCCCTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATCAGTCACCCCAACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419804.5
ENST00000458354.5
CDS-3UTR CCA 90 bp GCTGTGCAGGTAGGAGACGGCGCCAAGGACCTGACCCACCAGATGGCTGGCATCAGTCCTCAAAGGGCGTaGCATACAGGAGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: AVQVGDGAKDLTHQMAGISPQRA*HTGGFR
Trigger: CCGAAAACCTCCTGTATGCCACGCCCTTTGAGGACT...GATGCCAGCCATCTGGTGGGTCAGGTCCTTGGCGCCGTCTCCTACCTGCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR CCA 90 bp GGGAGGGGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCTGGCCCTCAGGATCTaGCTGAAGAGCTCAGGGTCG +
Preference number: 4 (lower is better)
Translates to: GRGPKASKGRKSGGQSTWLALRI*LKSSGS
Trigger: CGACCCTGAGCTCTTCAGCCAGATCCTGAGGGCCAG...CCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CCA 90 bp ACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCAGGTGAACCTCTTCTaGGGGTCTCGCTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: TPAPCATPSNLKIQQRPAQVNLF*GSRSRR
Trigger: CCTTCTGGAGCGAGACCCCCAGAAGAGGTTCACCTG...GGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp TCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGGTGCCGCAAGGCCTGTTaGCAGGTGAACCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SKGRKSGGQSTWPRHLPGCRKAC*QVNLFW
Trigger: CCAGAAGAGGTTCACCTGCCAACAGGCCTTGCGGCA...CCCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR CCA 90 bp AAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCCCAGCTTCCGGATGTaGCGCAGGAACGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: KHPREGNLGVSPLGLGICPSFRM*RRNEVA
Trigger: TGCCACCTCGTTCCTGCGCCACATCCGGAAGCTGGG...GCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR CCA 90 bp CTGGAAGGCCATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACCCAGCTTCCGGATGTaGCGCAGGAACGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LEGHDHDTSRTTHTQRSTPSFRM*RRNEVA
Trigger: TGCCACCTCGTTCCTGCGCCACATCCGGAAGCTGGG...TGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATGGCCTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370150.5
CDS-3UTR CCA 90 bp AAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCTGGGCATCACCACTTaGGGGGCTGGCCAGCACGGA +
Preference number: 4 (lower is better)
Translates to: KASKGRKSGGQSTWPRHLLGITT*GAGQHG
Trigger: TCCGTGCTGGCCAGCCCCCCAAGTGGTGATGCCCAG...CAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CCA 90 bp AAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGGGGGGTCAGTCCACTTaGCCTCGGCATCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KASKGRKSGGQSTWPRHLGGQST*PRHLPG
Trigger: CCCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCC...CAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR TCA 90 bp GACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCGCGACGATGTTGGGGTaGCTGATCCTACGGAGCACT +
Preference number: 4 (lower is better)
Translates to: DRKHPREGNLGVSPLGLGATMLG*LILRST
Trigger: AGTGCTCCGTAGGATCAGTCACCCCAACATCGTCGC...GCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR TCA 90 bp CCATTCCAACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAAGGAGCCGCGCTCCATaGTGCGGTCAAACAGCTCGC +
Preference number: 4 (lower is better)
Translates to: PFQPQRHAPHPQISKSSRRSRAP*CGQTAR
Trigger: GCGAGCTGTTTGACCGCATCATGGAGCGCGGCTCCT...TCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGGAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp CATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGAGGCCTGTTGGCAGGTaGACCTCTTCTGGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: HDHDTSRTTHTQRSTQQPRPVGR*TSSGGL
Trigger: GAGACCCCCAGAAGAGGTTCACCTGCCAACAGGCCT...CGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp TCCAACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCGGAACGAGGTGGCATTaGAGGCTCGCTTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SNPSAMRHTLKSQNPAEAGTRWH*RLASSV
Trigger: CACACTGGAAGCGAGCCTTCAATGCCACCTCGTTCC...GGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp GCAGGTAGGAGACGGCGCCAAGGACCTGACCCACCAGATGGCTGGCATCCTTCTCGATGTTGGGGTGACTaGTCCTGCAATGGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: AGRRRRQGPDPPDGWHPSRCWGD*SCNGKE
Trigger: TTCCTTGCCATTGCAGGATCAGTCACCCCAACATCG...AGAAGGATGCCAGCCATCTGGTGGGTCAGGTCCTTGGCGCCGTCTCCTACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433470.5
CDS-3UTR GCA 90 bp GTTGGGGTGACTGATCCTACGGAGCACTGCGATCTCGTTCTCCACCAGGGCCTCGATCCTACGGAGCACTaGGATCTCGTTCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: VGVTDPTEHCDLVLHQGLDPTEH*DLVLHQ
Trigger: CTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATC...GAGGCCCTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATCAGTCACCCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419804.5
ENST00000425526.5
ENST00000458354.5
CDS-3UTR GCA 90 bp GTGACTGATCCTACGGAGCACTGCGATCTCGTTCTCCACCAGGGCCTCCTTGCCGATCCTACGGAGCACTaGGATCTCGTTCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: VTDPTEHCDLVLHQGLLADPTEH*DLVLHQ
Trigger: CTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATC...GGCAAGGAGGCCCTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATCAGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419804.5
ENST00000425526.5
ENST00000458354.5
CDS-3UTR GCA 90 bp TCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGGGATCCTACGGAGCACTaGGATCTCGTTCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: SKGRKSGGQSTWPRHLPGDPTEH*DLVLHQ
Trigger: CTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATC...CCCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR GCA 90 bp GGTAGAGGTGGGAAGGGCTCTCGTGGACATCCTCCAGAGCGACGATGTTGGGGTGATCCTACGGAGCACTaGGATCTCGTTCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: GRGGKGSRGHPPERRCWGDPTEH*DLVLHQ
Trigger: CTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATC...ACCCCAACATCGTCGCTCTGGAGGATGTCCACGAGAGCCCTTCCCACCTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419804.5
ENST00000458354.5
CDS-3UTR GCA 90 bp AAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGGGGTCCCACAGGCGGTaGCTAGCATGTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: KASKGRKSGGQSTWPRHLGSHRR*LACSQP
Trigger: AGGCTGGGAACATGCTAGGCACCGCCTGTGGGACCC...CAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR GCA 90 bp CATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGCCAGAGATCCAAAGGTaGCGCAAGGCCTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: HDTSRTTHTQRSTQQPCRPEIQR*RKACWQ
Trigger: CTGCCAACAGGCCTTGCGGCACCTTTGGATCTCTGG...CCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp GCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTCCAGAGATCCAAAGGTaGCGCAAGGCCTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: ASKGRKSGGQSTWPRHLPPEIQR*RKACWQ
Trigger: CTGCCAACAGGCCTTGCGGCACCTTTGGATCTCTGG...AGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR GCA 90 bp CCATTCCAACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGATCGCCCTCTGGGATCTaGCCCAGCTTCCGGATGTGG +
Preference number: 4 (lower is better)
Translates to: PFQPQRHAPHPQISKSSRSPSGI*PSFRMW
Trigger: CCACATCCGGAAGCTGGGGCAGATCCCAGAGGGCGA...TCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGGAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp GTGACTGATCCTACGGAGCACTGCGATCTCGTTCTCCACCAGGGCCTCCTTGCCGACAAAGTCGAGGCTTaGTCATCAGCCAGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: VTDPTEHCDLVLHQGLLADKVEA*SSARQA
Trigger: AGCCTGCCTGGCTGATGAGCAAGCCTCGACTTTGTC...GGCAAGGAGGCCCTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATCAGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425526.5
CDS-3UTR GCA 90 bp GCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGTCGGCAAGGCTCTCTaGCTTCCAGTCTCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: ASKGRKSGGQSTWPRHLPVGKAL*LPVSAF
Trigger: GAAGGCAGAGACTGGAAGGCAGAGAGCCTTGCCGAC...AGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447676.6
CDS-3UTR GCA 90 bp GGTAGAGGTGGGAAGGGCTCTCGTGGACATCCTCCAGAGCGACGATGTTGGGGTGCAGCAGCATGTCTGTaGTACAAGAACGGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: GRGGKGSRGHPPERRCWGAAACL*YKNGGG
Trigger: ACCTCCGCCGTTCTTGTAGCACAGACATGCTGCTGC...ACCCCAACATCGTCGCTCTGGAGGATGTCCACGAGAGCCCTTCCCACCTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458354.5
CDS-3UTR CCA 90 bp TGGAAGGCCATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACTGGGAAGGGCTCTCGTaGACATCCTCCAGAGCGACG +
Preference number: 4 (lower is better)
Translates to: WKAMTMTQAGPPTLSEAHWEGLS*TSSRAT
Trigger: CGTCGCTCTGGAGGATGTCCACGAGAGCCCTTCCCA...GTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATGGCCTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370150.5
CDS-3UTR CCA 90 bp GCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTCCGTCACCAGTTCCATaGCCAGGTAGAGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ASKGRKSGGQSTWPRHLPPSPVP*PGRGGK
Trigger: CTTCCCACCTCTACCTGGCCATGGAACTGGTGACGG...AGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR CCA 90 bp GCAGGTAGGAGACGGCGCCAAGGACCTGACCCACCAGATGGCTGGCATCCTTCTAGTCCTCAAAGGGCGTaGCATACAGGAGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: AGRRRRQGPDPPDGWHPSSPQRA*HTGGFR
Trigger: CCGAAAACCTCCTGTATGCCACGCCCTTTGAGGACT...AGAAGGATGCCAGCCATCTGGTGGGTCAGGTCCTTGGCGCCGTCTCCTACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR CCA 90 bp GACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCCAGGTGAACCTCTTCTaGGGGTCTCGCTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: DRKHPREGNLGVSPLGLGQVNLF*GSRSRR
Trigger: CCTTCTGGAGCGAGACCCCCAGAAGAGGTTCACCTG...GCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CCA 90 bp AGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCCAGGTGAACCTCTTCTaGGGGTCTCGCTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SIQGKEIWGSVHLASASAQVNLF*GSRSRR
Trigger: CCTTCTGGAGCGAGACCCCCAGAAGAGGTTCACCTG...GGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR CCA 90 bp GGGAGGGGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGTGCCGCAAGGCCTGTTaGCAGGTGAACCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GRGPKASKGRKSGGQSTWCRKAC*QVNLFW
Trigger: CCAGAAGAGGTTCACCTGCCAACAGGCCTTGCGGCA...CCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCCCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CCA 90 bp GACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCTGCCGCAAGGCCTGTTaGCAGGTGAACCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: DRKHPREGNLGVSPLGLGCRKAC*QVNLFW
Trigger: CCAGAAGAGGTTCACCTGCCAACAGGCCTTGCGGCA...GCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR TCA 90 bp CAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCAGTCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: QRHAPHPQISKSSRGQPQSRRRC*CPPCVS
Trigger: AGAAACACACGGAGGACATCAGCAGCGTCTACGAGA...CTGGGGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp CACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGTCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: HPHSAKHTTAVQERQPLRSRRRC*CPPCVS
Trigger: AGAAACACACGGAGGACATCAGCAGCGTCTACGAGA...CCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp GGACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTTCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: GPPTLSEAHNSRAGKTAPSRRRC*CPPCVS
Trigger: AGAAACACACGGAGGACATCAGCAGCGTCTACGAGA...AGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp GACGATGTTGGGGTGACTGATCCTACGGAGCACTGCGATCTCGTTCTCCACCAGGCGACGATGTTGGGGTaGCTGATCCTACGGAGCACT +
Preference number: 4 (lower is better)
Translates to: DDVGVTDPTEHCDLVLHQATMLG*LILRST
Trigger: AGTGCTCCGTAGGATCAGTCACCCCAACATCGTCGC...CTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATCAGTCACCCCAACATCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419804.5
ENST00000425526.5
ENST00000458354.5
CDS-3UTR TCA 90 bp AAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCCTCAGGATCTGGCTaGAGAGCTCAGGGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: KASKGRKSGGQSTWPRHLPSGSG*RAQGRS
Trigger: AGAGCGACCCTGAGCTCTTCAGCCAGATCCTGAGGG...CAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR TCA 90 bp GCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCAGAAGGTGCCGGATaGAGTCTTTGGCTGATTCTG +
Preference number: 4 (lower is better)
Translates to: AGPPTLSEAHNSRAGKTAPEGAG*SLWLIL
Trigger: CAGAATCAGCCAAAGACTTCATCCGGCACCTTCTGG...GGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp GGGAGGGGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGGATCCTACGGAGCACTaGGATCTCGTTCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: GRGPKASKGRKSGGQSTWDPTEH*DLVLHQ
Trigger: CTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATC...CCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCCCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR GCA 90 bp GGGGGCTGGAAGGCCATGACCATGACACAAGCAGGACCACCCACACTCAGCGAATCTCGCTCCAGAAGGTaGCGGATGAAGTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: GGWKAMTMTQAGPPTLSESRSRR*RMKSLA
Trigger: AGCCAAAGACTTCATCCGGCACCTTCTGGAGCGAGA...TTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATGGCCTTCCAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370150.5
CDS-3UTR GCA 90 bp GCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGGGCTCTCGCTCCAGAAGGTaGCGGATGAAGTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: ASKGRKSGGQSTWPRHLGSRSRR*RMKSLA
Trigger: AGCCAAAGACTTCATCCGGCACCTTCTGGAGCGAGA...GCCCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370150.5
CDS-3UTR GCA 90 bp AGGGGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCCAGAGATCCAAAGGTaGCGCAAGGCCTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: RGPKASKGRKSGGQSTWPPEIQR*RKACWQ
Trigger: CTGCCAACAGGCCTTGCGGCACCTTTGGATCTCTGG...AGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR GCA 90 bp AAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCAACCCCAGCGCCATaGGCCACACCCTCAAATCTC +
Preference number: 4 (lower is better)
Translates to: KASKGRKSGGQSTWPRHLPTPAP*ATPSNL
Trigger: GAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGG...CAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp CCATTCCAACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGACCAACCCCAGCGCCATaGGCCACACCCTCAAATCTC +
Preference number: 4 (lower is better)
Translates to: PFQPQRHAPHPQISKSSRPTPAP*ATPSNL
Trigger: GAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGG...TCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp AAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCCGTCACCAGTTCCATaGCCAGGTAGAGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: KHPREGNLGVSPLGLGICPSPVP*PGRGGK
Trigger: CTTCCCACCTCTACCTGGCCATGGAACTGGTGACGG...GCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR CCA 90 bp GTCCCACAGGCGGTGCCTAGCATGTTCCCAGCCTGGATTTTGGAGAGTCCAAAGCCGTCACCAGTTCCATaGCCAGGTAGAGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: VPQAVPSMFPAWILESPKPSPVP*PGRGGK
Trigger: CTTCCCACCTCTACCTGGCCATGGAACTGGTGACGG...CTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCTAGGCACCGCCTGTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR CCA 90 bp GACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGTCCTCAAAGGGCGTaGCATACAGGAGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: DHPHSAKHTTAVQERQPLSPQRA*HTGGFR
Trigger: CCGAAAACCTCCTGTATGCCACGCCCTTTGAGGACT...CAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp ACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCAGTCCTCAAAGGGCGTaGCATACAGGAGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: TPAPCATPSNLKIQQRPASPQRA*HTGGFR
Trigger: CCGAAAACCTCCTGTATGCCACGCCCTTTGAGGACT...GGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp TGGAAGGCCATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACTGCCGCAAGGCCTGTTaGCAGGTGAACCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: WKAMTMTQAGPPTLSEAHCRKAC*QVNLFW
Trigger: CCAGAAGAGGTTCACCTGCCAACAGGCCTTGCGGCA...GTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATGGCCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370150.5
CDS-3UTR CCA 90 bp AGGGGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTTGCCGCAAGGCCTGTTaGCAGGTGAACCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RGPKASKGRKSGGQSTWPCRKAC*QVNLFW
Trigger: CCAGAAGAGGTTCACCTGCCAACAGGCCTTGCGGCA...AGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CCA 90 bp ATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGCAAGGGAAGGAAATCTaGGGGTCAGTCCACTTGGCC +
Preference number: 4 (lower is better)
Translates to: IQGKEIWGSVHLASASAWQGKEI*GSVHLA
Trigger: GGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTG...CCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR CCA 90 bp GGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCAAGGGAAGGAAATCTaGGGGTCAGTCCACTTGGCC +
Preference number: 4 (lower is better)
Translates to: GPKASKGRKSGGQSTWPRQGKEI*GSVHLA
Trigger: GGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTG...CCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CCA 90 bp CAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCAGAAAACTGGAGGGGGCTaGAAGGCCATGACCATGACA +
Preference number: 4 (lower is better)
Translates to: QRHAPHPQISKSSRGQPQKTGGG*KAMTMT
Trigger: TGTCATGGTCATGGCCTTCCAGCCCCCTCCAGTTTT...CTGGGGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340888.8
ENST00000370150.5
CDS-3UTR TCA 90 bp CGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCAGGGGCAAAGTCAGAGACCATaGTCTTCGAGTCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: RHAPHPQISKSSRGQPQGQSQRP*SSSPQR
Trigger: CCTTTGAGGACTCGAAGATCATGGTCTCTGACTTTG...CCCCTGGGGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp GGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCCAGAAGGTGCCGGATaGAGTCTTTGGCTGATTCTG +
Preference number: 4 (lower is better)
Translates to: GPKASKGRKSGGQSTWPRPEGAG*SLWLIL
Trigger: CAGAATCAGCCAAAGACTTCATCCGGCACCTTCTGG...CCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR TCA 90 bp AAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGGGAACGAGGTGGCATTaGAGGCTCGCTTCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: KASKGRKSGGQSTWPRHLGTRWH*RLASSV
Trigger: CACACTGGAAGCGAGCCTTCAATGCCACCTCGTTCC...CAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR GCA 90 bp TGGAAGGCCATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACGATCCTACGGAGCACTaGGATCTCGTTCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: WKAMTMTQAGPPTLSEAHDPTEH*DLVLHQ
Trigger: CTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATC...GTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATGGCCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370150.5
CDS-3UTR GCA 90 bp CATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGGATCCTACGGAGCACTaGGATCTCGTTCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: HDHDTSRTTHTQRSTQQPDPTEH*DLVLHQ
Trigger: CTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATC...CGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp GTCCCACAGGCGGTGCCTAGCATGTTCCCAGCCTGGATTTTGGAGAGTCCAAAGGATCCTACGGAGCACTaGGATCTCGTTCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: VPQAVPSMFPAWILESPKDPTEH*DLVLHQ
Trigger: CTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATC...CTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCTAGGCACCGCCTGTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411968.5
CDS-3UTR GCA 90 bp GGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGTCTCGCTCCAGAAGGTaGCGGATGAAGTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: GPKASKGRKSGGQSTWPRSRSRR*RMKSLA
Trigger: AGCCAAAGACTTCATCCGGCACCTTCTGGAGCGAGA...CCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR GCA 90 bp GACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCTCTCGCTCCAGAAGGTaGCGGATGAAGTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: DRKHPREGNLGVSPLGLGSRSRR*RMKSLA
Trigger: AGCCAAAGACTTCATCCGGCACCTTCTGGAGCGAGA...GCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR GCA 90 bp CCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCAAGTTCTTCCGGATCTaGTCACTGACAGAGCCTAAG +
Preference number: 4 (lower is better)
Translates to: PTLSEAHNSRAGKTAPEAKFFRI*SLTEPK
Trigger: CTTAGGCTCTGTCAGTGAGCAGATCCGGAAGAACTT...GGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp CGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCAGGGGAAGTTCTTCCGGATCTaGTCACTGACAGAGCCTAAG +
Preference number: 4 (lower is better)
Translates to: RHAPHPQISKSSRGQPQGKFFRI*SLTEPK
Trigger: CTTAGGCTCTGTCAGTGAGCAGATCCGGAAGAACTT...CCCCTGGGGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp GGGAGGGGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGAGTCCTCAAAGGGCGTaGCATACAGGAGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: GRGPKASKGRKSGGQSTWSPQRA*HTGGFR
Trigger: CCGAAAACCTCCTGTATGCCACGCCCTTTGAGGACT...CCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCCCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CCA 90 bp CCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGGCTCCCAGCCTGGATTTTaGAGAGTCCAAAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: PREGNLGVSPLGLGICLGSQPGF*RVQSQR
Trigger: TCTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGA...GCCCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR CCA 90 bp AGCTCTGGGGCCACATATCCAGGGGTCCCACAGGCGGTGCCTAGCATGTTCCCAAGCATGTTCCCAGCCTaGATTTTGGAGAGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SSGATYPGVPQAVPSMFPSMFPA*ILESPK
Trigger: CTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCT...TGGGAACATGCTAGGCACCGCCTGTGGGACCCCTGGATATGTGGCCCCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433470.5
CDS-3UTR CCA 90 bp ACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGTGCACAAGGGAAGGAAATCTaGGGGTCAGTCCACTTGGCC +
Preference number: 4 (lower is better)
Translates to: TMTQAGPPTLSEAHNSRAQGKEI*GSVHLA
Trigger: GGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTG...TGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp AGGGGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCAAGGGAAGGAAATCTaGGGGTCAGTCCACTTGGCC +
Preference number: 4 (lower is better)
Translates to: RGPKASKGRKSGGQSTWPQGKEI*GSVHLA
Trigger: GGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTG...AGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CCA 90 bp GACGATGTTGGGGTGACTGATCCTACGGAGCACTGCGATCTCGTTCTCCACCAGCTCCTCACAGTTCCATaGCCAGGTAGAGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: DDVGVTDPTEHCDLVLHQLLTVP*PGRGGK
Trigger: CTTCCCACCTCTACCTGGCCATGGAACTGTGAGGAG...CTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATCAGTCACCCCAACATCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419804.5
ENST00000458354.5
CDS-3UTR TCA 90 bp AAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCTCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: KHPREGNLGVSPLGLGICSRRRC*CPPCVS
Trigger: AGAAACACACGGAGGACATCAGCAGCGTCTACGAGA...GCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR TCA 90 bp CATGATCTTCGAGTCCTCAAAGGGCGTGGCATACAGGAGGTTTTCGGGCTTGAGGCGACGATGTTGGGGTaGCTGATCCTACGGAGCACT +
Preference number: 4 (lower is better)
Translates to: HDLRVLKGRGIQEVFGLEATMLG*LILRST
Trigger: AGTGCTCCGTAGGATCAGTCACCCCAACATCGTCGC...CTCAAGCCCGAAAACCTCCTGTATGCCACGCCCTTTGAGGACTCGAAGATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411968.5
CDS-3UTR TCA 90 bp CAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCAGCAAAGTCAGAGACCATaGTCTTCGAGTCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: QRHAPHPQISKSSRGQPQQSQRP*SSSPQR
Trigger: CCTTTGAGGACTCGAAGATCATGGTCTCTGACTTTG...CTGGGGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp AGGGGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCCAGAAGGTGCCGGATaGAGTCTTTGGCTGATTCTG +
Preference number: 4 (lower is better)
Translates to: RGPKASKGRKSGGQSTWPPEGAG*SLWLIL
Trigger: CAGAATCAGCCAAAGACTTCATCCGGCACCTTCTGG...AGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR TCA 90 bp AAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCCAGAAGGTGCCGGATaGAGTCTTTGGCTGATTCTG +
Preference number: 4 (lower is better)
Translates to: KHPREGNLGVSPLGLGICPEGAG*SLWLIL
Trigger: CAGAATCAGCCAAAGACTTCATCCGGCACCTTCTGG...GCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR GCA 90 bp TTCCCAGCCTGGATTTTGGAGAGTCCAAAGTCAGAGACCATGATCTTCGAGTCCGGGTCCCACAGGCGGTaGCTAGCATGTTCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: FPAWILESPKSETMIFESGSHRR*LACSQP
Trigger: AGGCTGGGAACATGCTAGGCACCGCCTGTGGGACCC...GGACTCGAAGATCATGGTCTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR GCA 90 bp AAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCTCTCGCTCCAGAAGGTaGCGGATGAAGTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: KHPREGNLGVSPLGLGICSRSRR*RMKSLA
Trigger: AGCCAAAGACTTCATCCGGCACCTTCTGGAGCGAGA...GCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR GCA 90 bp CCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCAAAGTTCTTCCGGATCTaGTCACTGACAGAGCCTAAG +
Preference number: 4 (lower is better)
Translates to: PAPCATPSNLKIQQRPAPKFFRI*SLTEPK
Trigger: CTTAGGCTCTGTCAGTGAGCAGATCCGGAAGAACTT...TGGGGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp GTGCCTAGCATGTTCCCAGCCTGGATTTTGGAGAGTCCAAAGTCAGAGACCATGTGGGAAGGGCTCTCGTaGACATCCTCCAGAGCGACG +
Preference number: 4 (lower is better)
Translates to: VPSMFPAWILESPKSETMWEGLS*TSSRAT
Trigger: CGTCGCTCTGGAGGATGTCCACGAGAGCCCTTCCCA...CATGGTCTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCTAGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR CCA 90 bp AAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCAGTCCTCAAAGGGCGTaGCATACAGGAGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: KHPREGNLGVSPLGLGICSPQRA*HTGGFR
Trigger: CCGAAAACCTCCTGTATGCCACGCCCTTTGAGGACT...GCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR CCA 90 bp CCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGTCCCAGCCTGGATTTTaGAGAGTCCAAAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: PPTLSEAHNSRAGKTAPESQPGF*RVQSQR
Trigger: TCTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGA...CTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp GCCACATATCCAGGGGTCCCACAGGCGGTGCCTAGCATGTTCCCAGCCTGGATTAGCATGTTCCCAGCCTaGATTTTGGAGAGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: ATYPGVPQAVPSMFPAWISMFPA*ILESPK
Trigger: CTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCT...AATCCAGGCTGGGAACATGCTAGGCACCGCCTGTGGGACCCCTGGATATGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR CCA 90 bp ACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAAAAACTGGAGGGGGCTaGAAGGCCATGACCATGACA +
Preference number: 4 (lower is better)
Translates to: TMTQAGPPTLSEAHNSRAKTGGG*KAMTMT
Trigger: TGTCATGGTCATGGCCTTCCAGCCCCCTCCAGTTTT...TGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340888.8
ENST00000370150.5
CDS-3UTR TCA 90 bp TCCCACAGGCGGTGCCTAGCATGTTCCCAGCCTGGATTTTGGAGAGTCCAAAGTTCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SHRRCLACSQPGFWRVQSSRRRC*CPPCVS
Trigger: AGAAACACACGGAGGACATCAGCAGCGTCTACGAGA...ACTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCTAGGCACCGCCTGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR TCA 90 bp GACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCCAAAGTCAGAGACCATaGTCTTCGAGTCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: DRKHPREGNLGVSPLGLGQSQRP*SSSPQR
Trigger: CCTTTGAGGACTCGAAGATCATGGTCTCTGACTTTG...GCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR TCA 90 bp AACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCAAAGTCAGAGACCATaGTCTTCGAGTCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: NPSAMRHTLKSQNPAEASQSQRP*SSSPQR
Trigger: CCTTTGAGGACTCGAAGATCATGGTCTCTGACTTTG...GCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR TCA 90 bp GGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCAAAGTCAGAGACCATaGTCTTCGAGTCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: GPKASKGRKSGGQSTWPRQSQRP*SSSPQR
Trigger: CCTTTGAGGACTCGAAGATCATGGTCTCTGACTTTG...CCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR GCA 90 bp AACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCAAGTTCTTCCGGATCTaGTCACTGACAGAGCCTAAG +
Preference number: 4 (lower is better)
Translates to: NPSAMRHTLKSQNPAEASKFFRI*SLTEPK
Trigger: CTTAGGCTCTGTCAGTGAGCAGATCCGGAAGAACTT...GCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR GCA 90 bp AGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCAAGTTCTTCCGGATCTaGTCACTGACAGAGCCTAAG +
Preference number: 4 (lower is better)
Translates to: SIQGKEIWGSVHLASASAKFFRI*SLTEPK
Trigger: CTTAGGCTCTGTCAGTGAGCAGATCCGGAAGAACTT...GGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR GCA 90 bp TTCCCAGCCTGGATTTTGGAGAGTCCAAAGTCAGAGACCATGATCTTCGAGTCCGCGCCTACGGAGCACTaGGATCTCGTTCTCCACCAG +
Preference number: 4 (lower is better)
Translates to: FPAWILESPKSETMIFESAPTEH*DLVLHQ
Trigger: CTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGCGC...GGACTCGAAGATCATGGTCTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433470.5
CDS-3UTR CCA 90 bp AAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGAGTCCTCAAAGGGCGTaGCATACAGGAGGTTTTCGG +
Preference number: 4 (lower is better)
Translates to: KASKGRKSGGQSTWPRHLSPQRA*HTGGFR
Trigger: CCGAAAACCTCCTGTATGCCACGCCCTTTGAGGACT...CAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CCA 90 bp GGGAGGGGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGTCCCAGCCTGGATTTTaGAGAGTCCAAAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: GRGPKASKGRKSGGQSTWSQPGF*RVQSQR
Trigger: TCTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGA...CCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCCCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CCA 90 bp GGCTGGAAGGCCATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCATCCCAGCCTGGATTTTaGAGAGTCCAAAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: GWKAMTMTQAGPPTLSEASQPGF*RVQSQR
Trigger: TCTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGA...TGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATGGCCTTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370150.5
CDS-3UTR CCA 90 bp CATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAGCATGTTCCCAGCCTaGATTTTGGAGAGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: HDTSRTTHTQRSTQQPCRSMFPA*ILESPK
Trigger: CTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCT...CCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp AGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCAGCATGTTCCCAGCCTaGATTTTGGAGAGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SIQGKEIWGSVHLASASASMFPA*ILESPK
Trigger: CTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCT...GGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR CCA 90 bp GCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTAGCATGTTCCCAGCCTaGATTTTGGAGAGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: ASKGRKSGGQSTWPRHLPSMFPA*ILESPK
Trigger: CTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCT...AGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR CCA 90 bp GACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGCTTTCTTTATTGGTTTaGGGAAAACTGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: DHPHSAKHTTAVQERQPLLSLLV*GKLEGA
Trigger: AGCCCCCTCCAGTTTTCCCCAAACCAATAAAGAAAG...CAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340888.8
ENST00000370150.5
CDS-3UTR CCA 90 bp GCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGGGCCTTTCTTTATTGGTTTaGGGAAAACTGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: ASKGRKSGGQSTWPRHLGLSLLV*GKLEGA
Trigger: AGCCCCCTCCAGTTTTCCCCAAACCAATAAAGAAAG...GCCCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000370150.5
3UTR CAA 72 bp CCACAGGCGGTGCCTAGCATGTTCCCAGCCTGGATTTaGGAGAGTCCAAAGTCAGAGACCATGATCTTCGAG +
Preference number: 4 (lower is better)
Translates to: PQAVPSMFPAWI*ESPKSETMIFE
Trigger: CTCGAAGATCATGGTCTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCTAGGCACCGCCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR TCA 90 bp GTGCCTAGCATGTTCCCAGCCTGGATTTTGGAGAGTCCAAAGTCAGAGACCATGGCGACGATGTTGGGGTaGCTGATCCTGCAATGGCAA +
Preference number: 4 (lower is better)
Translates to: VPSMFPAWILESPKSETMATMLG*LILQWQ
Trigger: TTGCCATTGCAGGATCAGTCACCCCAACATCGTCGC...CATGGTCTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCTAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433470.5
CDS-3UTR CCA 90 bp AAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCTCCCAGCCTGGATTTTaGAGAGTCCAAAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: KHPREGNLGVSPLGLGICSQPGF*RVQSQR
Trigger: TCTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGA...GCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR TCA 90 bp CCACAGGCGGTGCCTAGCATGTTCCCAGCCTGGATTTTGGAGAGTCCAAAGTCACAAAGTCAGAGACCATaGTCTTCGAGTCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: PQAVPSMFPAWILESPKSQSQRP*SSSPQR
Trigger: CCTTTGAGGACTCGAAGATCATGGTCTCTGACTTTG...TGACTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCTAGGCACCGCCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR CCA 90 bp CCACAGGCGGTGCCTAGCATGTTCCCAGCCTGGATTTTGGAGAGTCCAAAGTCATCCCAGCCTGGATTTTaGAGAGTCCAAAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: PQAVPSMFPAWILESPKSSQPGF*RVQSQR
Trigger: TCTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGA...TGACTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCTAGGCACCGCCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR CCA 90 bp CCATTCCAACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAAGCATGTTCCCAGCCTaGATTTTGGAGAGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: PFQPQRHAPHPQISKSSRSMFPA*ILESPK
Trigger: CTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCT...TCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CCA 90 bp AAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGAGCATGTTCCCAGCCTaGATTTTGGAGAGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: KASKGRKSGGQSTWPRHLSMFPA*ILESPK
Trigger: CTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCT...CAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CCA 90 bp CGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCAGGGGTGTATCTTTCTTTATTaGTTTGGGGAAAACTGGAGG +
Preference number: 4 (lower is better)
Translates to: RHAPHPQISKSSRGQPQGCIFLY*FGENWR
Trigger: CCTCCAGTTTTCCCCAAACCAATAAAGAAAGATACA...CCCCTGGGGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000340888.8
ENST00000370150.5
CDS-3UTR CCA 90 bp AGAGACCATGATCTTCGAGTCCTCAAAGGGCGTGGCATACAGGAGGTTTTCGGGTCCCAGCCTGGATTTTaGAGAGTCCAAAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: RDHDLRVLKGRGIQEVFGSQPGF*RVQSQR
Trigger: TCTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGA...CCCGAAAACCTCCTGTATGCCACGCCCTTTGAGGACTCGAAGATCATGGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR TCA 90 bp TTCCCAGCCTGGATTTTGGAGAGTCCAAAGTCAGAGACCATGATCTTCGAGTCCCAAAGTCAGAGACCATaGTCTTCGAGTCCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: FPAWILESPKSETMIFESQSQRP*SSSPQR
Trigger: CCTTTGAGGACTCGAAGATCATGGTCTCTGACTTTG...GGACTCGAAGATCATGGTCTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR CCA 90 bp CCATTCCAACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGATGTATCTTTCTTTATTaGTTTGGGGAAAACTGGAGG +
Preference number: 4 (lower is better)
Translates to: PFQPQRHAPHPQISKSSRCIFLY*FGENWR
Trigger: CCTCCAGTTTTCCCCAAACCAATAAAGAAAGATACA...TCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGGAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000340888.8
ENST00000370150.5
CDS TCA 90 bp GAGCTGCGTGGACCGAGCGCGTGCGGGCAGGGGGCGCGCCAGGCGTaGCAGGTGTGCTGCGGACGCGCAAGGCTGCGGCGGCCGCGGGCC +
Preference number: 5 (lower is better)
Translates to: ELRGPSACGQGARQA*QVCCGRARLRRPRA
Trigger: GGCCCGCGGCCGCCGCAGCCTTGCGCGTCCGCAGCACACCTGTCACGCCTGGCGCGCCCCCTGCCCGCACGCGCTCGGTCCACGCAGCTC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475172.5
CDS CCA 90 bp AGCAGGGGGACCTGGCAGCCTGGGCCGCCCGCGTCCCGAGCTGCGTaGACCGAGCGCGTGCGGGCAGGGGGCGCGCCAGGCGTGACAGGT +
Preference number: 5 (lower is better)
Translates to: SRGTWQPGPPASRAA*TERVRAGGAPGVTG
Trigger: ACCTGTCACGCCTGGCGCGCCCCCTGCCCGCACGCGCTCGGTCCACGCAGCTCGGGACGCGGGCGGCCCAGGCTGCCAGGTCCCCCTGCT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370150.5
ENST00000475172.5
CDS GCA 90 bp AGCAGCAGCATGTCTTGTAAGGCAATCGCCGGGATCCGGCTCGGGTaGCGGCCGCCACCGCCCAGCCCACTGCTCGCTCGCGCCGCCTCC +
Preference number: 5 (lower is better)
Translates to: SSSMSCKAIAGIRLG*RPPPPSPLLARAAS
Trigger: GGAGGCGGCGCGAGCGAGCAGTGGGCTGGGCGGTGGCGGCCGGCACCCGAGCCGGATCCCGGCGATTGCCTTACAAGACATGCTGCTGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447676.6
ENST00000462280.1
CDS CCA 90 bp GTGGCTGTGGCGGGCCATGCCCTGCTCAGAGGCCCCCTCGCCCTCTaGGATCTGCCCCAGCTTCCGGATGTGGCGCAGGAACGAGGTGGC +
Preference number: 5 (lower is better)
Translates to: VAVAGHALLRGPLAL*DLPQLPDVAQERGG
Trigger: GCCACCTCGTTCCTGCGCCACATCCGGAAGCTGGGGCAGATCCCAGAGGGCGAGGGGGCCTCTGAGCAGGGCATGGCCCGCCACAGCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000438984.5
ENST00000447676.6
ENST00000466074.5
ENST00000472324.5
CDS CCA 90 bp TTGGGGATGCACTTGAGGGCCACGAGGTGTGCGGAGCCCCGCTCCTaGGCCAGCACCACCTCGGAGAAGGCACCCGAGCCGAGCCTCTCG +
Preference number: 5 (lower is better)
Translates to: LGMHLRATRCAEPRS*ASTTSEKAPEPSLS
Trigger: CGAGAGGCTCGGCTCGGGTGCCTTCTCCGAGGTGGTGCTGGCCCAGGAGCGGGGCTCCGCACACCTCGTGGCCCTCAAGTGCATCCCCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 20 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000418241.5
ENST00000419804.5
ENST00000422811.5
ENST00000425526.5
ENST00000433470.5
ENST00000434652.5
ENST00000439087.5
ENST00000447676.6
ENST00000458354.5
ENST00000463548.1
ENST00000465303.5
ENST00000466074.5
ENST00000475172.5
ENST00000488168.5
ENST00000488994.5
ENST00000489536.5
CDS GCA 90 bp TGGCGGGCCATGCCCTGCTCAGAGGCCCCCTCGCCCTCTGGGATCTaGCCCAGCTTCCGGATGTGGCGCAGGAACGAGGTGGCATTGAAG +
Preference number: 5 (lower is better)
Translates to: WRAMPCSEAPSPSGI*PSFRMWRRNEVALK
Trigger: CTTCAATGCCACCTCGTTCCTGCGCCACATCCGGAAGCTGGGGCAGATCCCAGAGGGCGAGGGGGCCTCTGAGCAGGGCATGGCCCGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000438984.5
ENST00000447676.6
ENST00000466074.5
ENST00000472324.5
CDS-3UTR CAA 90 bp TCCTACGGAGCACTGCGATCTCGTTCTCCACCAGGGCCTCCTTGCCCCGGAGGGCCCCGGAGGGCCTTCTaGGGGATGCACTTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: SYGALRSRSPPGPPCPGGPRRAF*GMHLRA
Trigger: GGCCCTCAAGTGCATCCCCAAGAAGGCCCTCCGGGG...CCCTCCGGGGCAAGGAGGCCCTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419804.5
ENST00000425526.5
ENST00000458354.5
CDS CCA 90 bp CCACCTCGGAGAAGGCACCCCTGCCGCAGACGGGGCGGTGGGAGGTaGGAAGGAAGTGGGAAGAGAGGAGAGGCAGGAGGGAGAGAGAGT +
Preference number: 5 (lower is better)
Translates to: PPRRRHPCRRRGGGR*EGSGKRGEAGGRES
Trigger: ACTCTCTCTCCCTCCTGCCTCTCCTCTCTTCCCACTTCCTTCCCACCTCCCACCGCCCCGTCTGCGGCAGGGGTGCCTTCTCCGAGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000466638.5
ENST00000466662.1
ENST00000472324.5
CDS-3UTR CAA 90 bp GGGCCACATATCCAGGGGTCCCACAGGCGGTGCCTAGCATGTTCCCAGCCTGGACCCCGGAGGGCCTTCTaGGGGATGCACTTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: GPHIQGSHRRCLACSQPGPRRAF*GMHLRA
Trigger: GGCCCTCAAGTGCATCCCCAAGAAGGCCCTCCGGGG...TCCAGGCTGGGAACATGCTAGGCACCGCCTGTGGGACCCCTGGATATGTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR CAA 90 bp CTGATCCTACGGAGCACTGCGATCTCGTTCTCCACCAGGGCCTCCTTGCCCCGGCCCCGGAGGGCCTTCTaGGGGATGCACTTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: LILRSTAISFSTRASLPRPRRAF*GMHLRA
Trigger: GGCCCTCAAGTGCATCCCCAAGAAGGCCCTCCGGGG...CCGGGGCAAGGAGGCCCTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419804.5
ENST00000425526.5
ENST00000458354.5
CDS GCA 90 bp TCTCTGCCTTCACCGCCTCTCCGAGGACAGGCTGACCCGGCCACTTaGCCGAAAGCAGCCTCCATGCCTAGCTCCAGGACCCTGCAACCC +
Preference number: 5 (lower is better)
Translates to: SLPSPPLRGQADPAT*PKAASMPSSRTLQP
Trigger: GGGTTGCAGGGTCCTGGAGCTAGGCATGGAGGCTGCTTTCGGGCAAGTGGCCGGGTCAGCCTGTCCTCGGAGAGGCGGTGAAGGCAGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447676.6
ENST00000462280.1
CDS GCA 90 bp AGCTCTTCGGCCACAGGTCGGCAAGGCTCTCTGCCTTCCAGTCTCTaGCTTCACCGCCTCTCCGAGGACAGGCTGACCCGGCCACTTGCC +
Preference number: 5 (lower is better)
Translates to: SSSATGRQGSLPSSL*LHRLSEDRLTRPLA
Trigger: GGCAAGTGGCCGGGTCAGCCTGTCCTCGGAGAGGCGGTGAAGGCAGAGACTGGAAGGCAGAGAGCCTTGCCGACCTGTGGCCGAAGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447676.6
ENST00000462280.1
CDS-3UTR CAA 90 bp ACTGATCCTACGGAGCACTGCGATCTCGTTCTCCACCAGGGCCTCCTTGCCCCGCCCCGGAGGGCCTTCTaGGGGATGCACTTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: TDPTEHCDLVLHQGLLAPPRRAF*GMHLRA
Trigger: GGCCCTCAAGTGCATCCCCAAGAAGGCCCTCCGGGG...CGGGGCAAGGAGGCCCTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419804.5
ENST00000425526.5
ENST00000458354.5
CDS-3UTR CAA 90 bp CCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCTGGGCCCCCGGAGGGCCTTCTaGGGGATGCACTTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: PREGNLGVSPLGLGICLGPRRAF*GMHLRA
Trigger: GGCCCTCAAGTGCATCCCCAAGAAGGCCCTCCGGGG...GCCCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR CAA 90 bp CACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCGCCTGGGGGTCAGTCCACTaGGCCTCGGCATCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: HSAKHTTAVQERQPLRPAWGSVH*ASASAW
Trigger: CCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCA...GGCGGGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
CDS-3UTR CAA 90 bp CTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCGCCTGTGGGGGTCAGTCCACTaGGCCTCGGCATCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: LSEAHNSRAGKTAPEARLWGSVH*ASASAW
Trigger: CCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCA...CAGGCGGGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
CDS TCA 90 bp GGGAGGGCCCCGAGCCGAGCCTCTCGCGGATCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCTTCAGCAGCAGCATGTCTGGAGCGG +
Preference number: 5 (lower is better)
Translates to: GRAPSRASRGSRRRC*CPPCVSSAAACLER
Trigger: CCGCTCCAGACATGCTGCTGCTGAAGAAACACACGGAGGACATCAGCAGCGTCTACGAGATCCGCGAGAGGCTCGGCTCGGGGCCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472324.5
CDS GCA 90 bp GTGACACACGGACACCGGGAAAAGGGCCAGTCAGTCCTGACGCGGTaGCGGTGCTGGGACAGGATGGGGACTAGGCACTCTCAGGTTCCC +
Preference number: 5 (lower is better)
Translates to: VTHGHREKGQSVLTR*RCWDRMGTRHSQVP
Trigger: GGGAACCTGAGAGTGCCTAGTCCCCATCCTGTCCCAGCACCGGCACCGCGTCAGGACTGACTGGCCCTTTTCCCGGTGTCCGTGTGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465303.5
ENST00000472324.5
ENST00000473680.1
ENST00000488168.5
CDS CCA 90 bp TCAGAGGCCCCCTCGCCCTCTGGGATCTGCCCCAGCTTCCGGATGTaGCGCAGGAACGAGGTGGCATTGAAGGCTCGCTTCCAGTGTGTC +
Preference number: 5 (lower is better)
Translates to: SEAPSPSGICPSFRM*RRNEVALKARFQCV
Trigger: GACACACTGGAAGCGAGCCTTCAATGCCACCTCGTTCCTGCGCCACATCCGGAAGCTGGGGCAGATCCCAGAGGGCGAGGGGGCCTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000438984.5
ENST00000447676.6
ENST00000466074.5
ENST00000472324.5
CDS TCA 90 bp GAGCCCCGCTCGAGCCGAGCCTCTCGCGGATCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCTTCAGCAGCAGCATGTCTGGAGCGG +
Preference number: 5 (lower is better)
Translates to: EPRSSRASRGSRRRC*CPPCVSSAAACLER
Trigger: CCGCTCCAGACATGCTGCTGCTGAAGAAACACACGGAGGACATCAGCAGCGTCTACGAGATCCGCGAGAGGCTCGGCTCGAGCGGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411968.5
CDS-3UTR CAA 90 bp AGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCCCCCGGAGGGCCTTCTaGGGGATGCACTTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: SIQGKEIWGSVHLASASAPRRAF*GMHLRA
Trigger: GGCCCTCAAGTGCATCCCCAAGAAGGCCCTCCGGGG...GGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR CAA 90 bp TCCAACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCCCCCGGAGGGCCTTCTaGGGGATGCACTTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: SNPSAMRHTLKSQNPAEAPRRAF*GMHLRA
Trigger: GGCCCTCAAGTGCATCCCCAAGAAGGCCCTCCGGGG...GGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS TCA 90 bp AGAAGGCACCCGAGCCGAGCCTCTCGCGGATCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCTTCAGCAGCAGCATGTCCTCCCCCG +
Preference number: 5 (lower is better)
Translates to: RRHPSRASRGSRRRC*CPPCVSSAAACPPP
Trigger: CGGGGGAGGACATGCTGCTGCTGAAGAAACACACGGAGGACATCAGCAGCGTCTACGAGATCCGCGAGAGGCTCGGCTCGGGTGCCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439087.5
CDS CCA 90 bp CCATGCCGCTCAGTGTCACTGGCTCGGCCTACTCAAGCCCAGGAATaGCCCACACAAAGGCAACGGGCACAACAGCCTTCCCGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: PCRSVSLARPTQAQE*PTQRQRAQQPSRLS
Trigger: AGACAGCCGGGAAGGCTGTTGTGCCCGTTGCCTTTGTGTGGGCCATTCCTGGGCTTGAGTAGGCCGAGCCAGTGACACTGAGCGGCATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000466638.5
ENST00000472324.5
ENST00000473680.1
ENST00000488994.5
ENST00000489536.5
CDS-3UTR CAA 90 bp CCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCTTCTTGGGGATGCACTaGAGGGCCACGAGGTGTGCG +
Preference number: 5 (lower is better)
Translates to: PHSAKHTTAVQERQPLRPFLGMH*RATRCA
Trigger: CGCACACCTCGTGGCCCTCAAGTGCATCCCCAAGAA...GGGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CAA 90 bp GTCCCACAGGCGGTGCCTAGCATGTTCCCAGCCTGGATTTTGGAGAGTCCAAAGCCCCGGAGGGCCTTCTaGGGGATGCACTTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: VPQAVPSMFPAWILESPKPRRAF*GMHLRA
Trigger: GGCCCTCAAGTGCATCCCCAAGAAGGCCCTCCGGGG...CTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCTAGGCACCGCCTGTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR CAA 90 bp CGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCAGGGGGTGCCGCAAGGCCTGTaGGCAGGTGAACCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: RHAPHPQISKSSRGQPQGVPQGL*AGEPLL
Trigger: CAGAAGAGGTTCACCTGCCAACAGGCCTTGCGGCAC...CCCCTGGGGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CAA 90 bp GGGAGGGGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGTGGGGGTCAGTCCACTaGGCCTCGGCATCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: GRGPKASKGRKSGGQSTWWGSVH*ASASAW
Trigger: CCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCA...CCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS TCA 90 bp AGAAGGCACCCGAGCCGAGCCTCTCGCGGATCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCTTCAGCAGCAGCATGTCTGGAGCGG +
Preference number: 5 (lower is better)
Translates to: RRHPSRASRGSRRRC*CPPCVSSAAACLER
Trigger: CCGCTCCAGACATGCTGCTGCTGAAGAAACACACGGAGGACATCAGCAGCGTCTACGAGATCCGCGAGAGGCTCGGCTCGGGTGCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000433470.5
ENST00000465303.5
ENST00000489536.5
CDS TCA 90 bp AGAAGGCACCCGAGCCGAGCCTCTCGCGGATCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCTTCAGCAGCAGCATGTCCCCAGACG +
Preference number: 5 (lower is better)
Translates to: RRHPSRASRGSRRRC*CPPCVSSAAACPQT
Trigger: CGTCTGGGGACATGCTGCTGCTGAAGAAACACACGGAGGACATCAGCAGCGTCTACGAGATCCGCGAGAGGCTCGGCTCGGGTGCCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370145.8
CDS TCA 90 bp AGAAGGCACCCGAGCCGAGCCTCTCGCGGATCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCTTCAGCAGCAGCATGTCTGCGACCC +
Preference number: 5 (lower is better)
Translates to: RRHPSRASRGSRRRC*CPPCVSSAAACLRP
Trigger: GGGTCGCAGACATGCTGCTGCTGAAGAAACACACGGAGGACATCAGCAGCGTCTACGAGATCCGCGAGAGGCTCGGCTCGGGTGCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370150.5
ENST00000475172.5
CDS TCA 90 bp AGAAGGCACCCGAGCCGAGCCTCTCGCGGATCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCTTCAGCAGCAGCATGTCCCGAAGGC +
Preference number: 5 (lower is better)
Translates to: RRHPSRASRGSRRRC*CPPCVSSAAACPEG
Trigger: GCCTTCGGGACATGCTGCTGCTGAAGAAACACACGGAGGACATCAGCAGCGTCTACGAGATCCGCGAGAGGCTCGGCTCGGGTGCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434652.5
ENST00000463548.1
CDS TCA 90 bp CGCACACTCACGAGCCGAGCCTCTCGCGGATCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCTTCAGCAGCAGCATGTCTGGAGCGG +
Preference number: 5 (lower is better)
Translates to: RTLTSRASRGSRRRC*CPPCVSSAAACLER
Trigger: CCGCTCCAGACATGCTGCTGCTGAAGAAACACACGGAGGACATCAGCAGCGTCTACGAGATCCGCGAGAGGCTCGGCTCGTGAGTGTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466638.5
CDS-3UTR CAA 90 bp GGACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTTTCTTGGGGATGCACTaGAGGGCCACGAGGTGTGCG +
Preference number: 5 (lower is better)
Translates to: GPPTLSEAHNSRAGKTAPFLGMH*RATRCA
Trigger: CGCACACCTCGTGGCCCTCAAGTGCATCCCCAAGAA...AGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CAA 90 bp AAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCCCCGGAGGGCCTTCTaGGGGATGCACTTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: KASKGRKSGGQSTWPRHLPRRAF*GMHLRA
Trigger: GGCCCTCAAGTGCATCCCCAAGAAGGCCCTCCGGGG...CAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CAA 90 bp CAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCAGCCCCAGGTGCCGCAAGGCCTGTaGGCAGGTGAACCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: QRHAPHPQISKSSRGQPQVPQGL*AGEPLL
Trigger: CAGAAGAGGTTCACCTGCCAACAGGCCTTGCGGCAC...CTGGGGCTGGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CAA 90 bp CACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCGCCAGGAACGAGGTGGCATaGAAGGCTCGCTTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: HSAKHTTAVQERQPLRPARNEVA*KARFQC
Trigger: ACACTGGAAGCGAGCCTTCAATGCCACCTCGTTCCT...GGCGGGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CAA 90 bp CTGGAAGGCCATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACATGGGGGTCAGTCCACTaGGCCTCGGCATCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: LEGHDHDTSRTTHTQRSTWGSVH*ASASAW
Trigger: CCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCA...TGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATGGCCTTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340888.8
ENST00000370142.5
CDS TCA 90 bp TGGGAAGGGCTCTCGTGGACATCCTCCAGAGCGACGATGTTGGGGTaGCTGATCCTGCAATGGCAAGGAAGCGCCTACGGAGCACTGCGA +
Preference number: 5 (lower is better)
Translates to: WEGLSWTSSRATMLG*LILQWQGSAYGALR
Trigger: TCGCAGTGCTCCGTAGGCGCTTCCTTGCCATTGCAGGATCAGTCACCCCAACATCGTCGCTCTGGAGGATGTCCACGAGAGCCCTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418241.5
ENST00000433470.5
CDS TCA 90 bp AGAAGGCACCCGAGCCGAGCCTCTCGCGGATCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCTTCAGCAGCAGCATGTTTCACCGGG +
Preference number: 5 (lower is better)
Translates to: RRHPSRASRGSRRRC*CPPCVSSAAACFTG
Trigger: CCCGGTGAAACATGCTGCTGCTGAAGAAACACACGGAGGACATCAGCAGCGTCTACGAGATCCGCGAGAGGCTCGGCTCGGGTGCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423545.1
ENST00000425526.5
ENST00000488994.5
CDS CCA 90 bp GTTGTGGCCAGCATCACAAGGGTTCCGTCAAGTGACCGTGGGCCCTaGCATGACACGACGTCTTCAAGAGAGTCCACGGGGCAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: VVASITRVPSSDRGP*HDTTSSRESTGQEE
Trigger: CTCTTCCTGCCCCGTGGACTCTCTTGAAGACGTCGTGTCATGCCAGGGCCCACGGTCACTTGACGGAACCCTTGTGATGCTGGCCACAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418241.5
CDS-3UTR CAA 90 bp CATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGGTGCCGCAAGGCCTGTaGGCAGGTGAACCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: HDTSRTTHTQRSTQQPCRVPQGL*AGEPLL
Trigger: CAGAAGAGGTTCACCTGCCAACAGGCCTTGCGGCAC...CCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CAA 90 bp GGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGGTGCCGCAAGGCCTGTaGGCAGGTGAACCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: GPKASKGRKSGGQSTWPRVPQGL*AGEPLL
Trigger: CAGAAGAGGTTCACCTGCCAACAGGCCTTGCGGCAC...CCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CAA 90 bp CATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGTGGGGGTCAGTCCACTaGGCCTCGGCATCTGGGCAT +
Preference number: 5 (lower is better)
Translates to: HDHDTSRTTHTQRSTQQPWGSVH*ASASGH
Trigger: ATGCCCAGATGCCGAGGCCAAGTGGACTGACCCCCA...CGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370150.5
CDS TCA 90 bp AGAAGGCACCCGAGCCGAGCCTCTCGCGGATCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCTTCAGCAGCAGCATGTCCTCGCTTT +
Preference number: 5 (lower is better)
Translates to: RRHPSRASRGSRRRC*CPPCVSSAAACPRF
Trigger: AAAGCGAGGACATGCTGCTGCTGAAGAAACACACGGAGGACATCAGCAGCGTCTACGAGATCCGCGAGAGGCTCGGCTCGGGTGCCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370142.5
ENST00000488168.5
CDS TCA 90 bp AGAAGGCACCCGAGCCGAGCCTCTCGCGGATCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCTTCAGCAGCAGCATGTCTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: RRHPSRASRGSRRRC*CPPCVSSAAACLKS
Trigger: GCTCTTCAGACATGCTGCTGCTGAAGAAACACACGGAGGACATCAGCAGCGTCTACGAGATCCGCGAGAGGCTCGGCTCGGGTGCCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419804.5
CDS TCA 90 bp AGAAGGCACCCGAGCCGAGCCTCTCGCGGATCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCTTCAGCAGCAGCATGTCTTCTTCGC +
Preference number: 5 (lower is better)
Translates to: RRHPSRASRGSRRRC*CPPCVSSAAACLLR
Trigger: GCGAAGAAGACATGCTGCTGCTGAAGAAACACACGGAGGACATCAGCAGCGTCTACGAGATCCGCGAGAGGCTCGGCTCGGGTGCCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418241.5
CDS TCA 90 bp AAGGGCTCTCGTGGACATCCTCCAGAGCGACGATGTTGGGGTGACTaGTCCTGCAATGGCAAGGAAGCGCCTACGGAGCACTGCGATCTC +
Preference number: 5 (lower is better)
Translates to: KGSRGHPPERRCWGD*SCNGKEAPTEHCDL
Trigger: GAGATCGCAGTGCTCCGTAGGCGCTTCCTTGCCATTGCAGGATCAGTCACCCCAACATCGTCGCTCTGGAGGATGTCCACGAGAGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418241.5
ENST00000433470.5
CDS TCA 90 bp AGAAGGCACCCGAGCCGAGCCTCTCGCGGATCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCTTCAGCAGCAGCATGTCTGTGCTAC +
Preference number: 5 (lower is better)
Translates to: RRHPSRASRGSRRRC*CPPCVSSAAACLCY
Trigger: GTAGCACAGACATGCTGCTGCTGAAGAAACACACGGAGGACATCAGCAGCGTCTACGAGATCCGCGAGAGGCTCGGCTCGGGTGCCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458354.5
CDS-3UTR CAA 90 bp AAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGCTTCTTGGGGATGCACTaGAGGGCCACGAGGTGTGCG +
Preference number: 5 (lower is better)
Translates to: KHPREGNLGVSPLGLGICFLGMH*RATRCA
Trigger: CGCACACCTCGTGGCCCTCAAGTGCATCCCCAAGAA...GCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
CDS-3UTR CAA 90 bp CCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGAGGAACGAGGTGGCATaGAAGGCTCGCTTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: PPTLSEAHNSRAGKTAPERNEVA*KARFQC
Trigger: ACACTGGAAGCGAGCCTTCAATGCCACCTCGTTCCT...CTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CAA 90 bp GCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGGGCAGGAACGAGGTGGCATaGAAGGCTCGCTTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: ASKGRKSGGQSTWPRHLGRNEVA*KARFQC
Trigger: ACACTGGAAGCGAGCCTTCAATGCCACCTCGTTCCT...GCCCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370150.5
CDS TCA 90 bp AGAAGGCACCCGAGCCGAGCCTCTCGCGGATCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCTTCAGCAGCAGCATGTCTTGTAAGG +
Preference number: 5 (lower is better)
Translates to: RRHPSRASRGSRRRC*CPPCVSSAAACLVR
Trigger: CCTTACAAGACATGCTGCTGCTGAAGAAACACACGGAGGACATCAGCAGCGTCTACGAGATCCGCGAGAGGCTCGGCTCGGGTGCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447676.6
ENST00000466074.5
CDS TCA 90 bp CGCACACTCACGAGCCGAGCCTCTCGCGGATCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCTTCAGCAGCAGCATGTCTTGTAAGG +
Preference number: 5 (lower is better)
Translates to: RTLTSRASRGSRRRC*CPPCVSSAAACLVR
Trigger: CCTTACAAGACATGCTGCTGCTGAAGAAACACACGGAGGACATCAGCAGCGTCTACGAGATCCGCGAGAGGCTCGGCTCGTGAGTGTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462280.1
CDS-3UTR CAA 90 bp CCATTCCAACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGATTCTTGGGGATGCACTaGAGGGCCACGAGGTGTGCG +
Preference number: 5 (lower is better)
Translates to: PFQPQRHAPHPQISKSSRFLGMH*RATRCA
Trigger: CGCACACCTCGTGGCCCTCAAGTGCATCCCCAAGAA...TCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CAA 90 bp CTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGGCCCGCCTGTGCCGGATGAAGTCTTaGGCTGATTCTGAGATGTCA +
Preference number: 5 (lower is better)
Translates to: LSEAHNSRAGKTAPEARLCRMKS*ADSEMS
Trigger: TGACATCTCAGAATCAGCCAAAGACTTCATCCGGCA...CAGGCGGGCCTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CAA 90 bp AAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGGTGCCGCAAGGCCTGTaGGCAGGTGAACCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: KASKGRKSGGQSTWPRHLVPQGL*AGEPLL
Trigger: CAGAAGAGGTTCACCTGCCAACAGGCCTTGCGGCAC...CAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CAA 90 bp GGCTGGAAGGCCATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCAAGGAACGAGGTGGCATaGAAGGCTCGCTTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: GWKAMTMTQAGPPTLSEARNEVA*KARFQC
Trigger: ACACTGGAAGCGAGCCTTCAATGCCACCTCGTTCCT...TGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATGGCCTTCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370150.5
CDS-3UTR CAA 90 bp GACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCAGGAACGAGGTGGCATaGAAGGCTCGCTTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: DRKHPREGNLGVSPLGLGRNEVA*KARFQC
Trigger: ACACTGGAAGCGAGCCTTCAATGCCACCTCGTTCCT...GCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CAA 90 bp ACCATGATCTTCGAGTCCTCAAAGGGCGTGGCATACAGGAGGTTTTCGGGCTTGTTCTTGGGGATGCACTaGAGGGCCACGAGGTGTGCG +
Preference number: 5 (lower is better)
Translates to: TMIFESSKGVAYRRFSGLFLGMH*RATRCA
Trigger: CGCACACCTCGTGGCCCTCAAGTGCATCCCCAAGAA...CAAGCCCGAAAACCTCCTGTATGCCACGCCCTTTGAGGACTCGAAGATCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR CAA 90 bp GACCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGTTCCCAGCCTGGATTTaGGAGAGTCCAAAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: DHPHSAKHTTAVQERQPLFPAWI*ESPKSE
Trigger: CTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGAA...CAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CAA 90 bp CCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGTTCCCAGCCTGGATTTaGGAGAGTCCAAAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: PPTLSEAHNSRAGKTAPEFPAWI*ESPKSE
Trigger: CTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGAA...CTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS CCA 90 bp GTTGTGGCCAGCATCACAAGGGTTCCGTCAAGTGACCGTGGGCCCTaGCATGACACGACGTCTGCTCCTCTATGTGAAAATGGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: VVASITRVPSSDRGP*HDTTSAPLCENGFL
Trigger: CAGGAAACCATTTTCACATAGAGGAGCAGACGTCGTGTCATGCCAGGGCCCACGGTCACTTGACGGAACCCTTGTGATGCTGGCCACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460106.1
CDS-3UTR CAA 90 bp TCCAACCCCAGCGCCATGCGCCACACCCTCAAATCTCAAAATCCAGCAGAGGCCTTCCCAGCCTGGATTTaGGAGAGTCCAAAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: SNPSAMRHTLKSQNPAEAFPAWI*ESPKSE
Trigger: CTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGAA...GGCCTCTGCTGGATTTTGAGATTTGAGGGTGTGGCGCATGGCGCTGGGGTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CAA 90 bp GGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGTTCCCAGCCTGGATTTaGGAGAGTCCAAAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: GPKASKGRKSGGQSTWPRFPAWI*ESPKSE
Trigger: CTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGAA...CCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CAA 90 bp CCACCCACACTCAGCGAAGCACACAACAGCCGTGCAGGAAAGACAGCCCCTGAGTGCCGGATGAAGTCTTaGGCTGATTCTGAGATGTCA +
Preference number: 5 (lower is better)
Translates to: PPTLSEAHNSRAGKTAPECRMKS*ADSEMS
Trigger: TGACATCTCAGAATCAGCCAAAGACTTCATCCGGCA...CTCAGGGGCTGTCTTTCCTGCACGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CAA 90 bp CATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGTTCCCAGCCTGGATTTaGGAGAGTCCAAAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: HDHDTSRTTHTQRSTQQPFPAWI*ESPKSE
Trigger: CTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGAA...CGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
CDS-3UTR CAA 90 bp GTCCCACAGGCGGTGCCTAGCATGTTCCCAGCCTGGATTTTGGAGAGTCCAAAGTTCCCAGCCTGGATTTaGGAGAGTCCAAAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: VPQAVPSMFPAWILESPKFPAWI*ESPKSE
Trigger: CTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGAA...CTTTGGACTCTCCAAAATCCAGGCTGGGAACATGCTAGGCACCGCCTGTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR CAA 90 bp AGGGGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTTGCCGGATGAAGTCTTaGGCTGATTCTGAGATGTCA +
Preference number: 5 (lower is better)
Translates to: RGPKASKGRKSGGQSTWPCRMKS*ADSEMS
Trigger: TGACATCTCAGAATCAGCCAAAGACTTCATCCGGCA...AGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CAA 90 bp CATGATCTTCGAGTCCTCAAAGGGCGTGGCATACAGGAGGTTTTCGGGCTTGAGTTCCCAGCCTGGATTTaGGAGAGTCCAAAGTCAGAG +
Preference number: 5 (lower is better)
Translates to: HDLRVLKGRGIQEVFGLEFPAWI*ESPKSE
Trigger: CTCTGACTTTGGACTCTCCAAAATCCAGGCTGGGAA...CTCAAGCCCGAAAACCTCCTGTATGCCACGCCCTTTGAGGACTCGAAGATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411968.5
ENST00000433470.5
CDS-3UTR CAA 90 bp AAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGCATCTGTGCCGGATGAAGTCTTaGGCTGATTCTGAGATGTCA +
Preference number: 5 (lower is better)
Translates to: KASKGRKSGGQSTWPRHLCRMKS*ADSEMS
Trigger: TGACATCTCAGAATCAGCCAAAGACTTCATCCGGCA...CAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
CDS-3UTR CAA 90 bp GGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCCTCGGAGAGCATTCCTTTTATaGAGATCATGTCACCCTCCT +
Preference number: 5 (lower is better)
Translates to: GPKASKGRKSGGQSTWPRRAFLL*RSCHPP
Trigger: AGGAGGGTGACATGATCTCAATAAAAGGAATGCTCT...CCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447676.6
CDS GCA 90 bp GGGACCGACATAGATAGTTCCCCAGAATGTCTAATACGCCAATGGTaGTTTGCCCAAGCAGAGTTCTACAACATGGTCTTCACCGGGTCC +
Preference number: 5 (lower is better)
Translates to: GTDIDSSPECLIRQW*FAQAEFYNMVFTGS
Trigger: GGACCCGGTGAAGACCATGTTGTAGAACTCTGCTTGGGCAAAGCACCATTGGCGTATTAGACATTCTGGGGAACTATCTATGTCGGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460106.1
CDS CCA 90 bp CCTGGGACCGACATAGATAGTTCCCCAGAATGTCTAATACGCCAATaGTGCTTTGCCCAAGCAGAGTTCTACAACATGGTCTTCACCGGG +
Preference number: 5 (lower is better)
Translates to: PGTDIDSSPECLIRQ*CFAQAEFYNMVFTG
Trigger: CCCGGTGAAGACCATGTTGTAGAACTCTGCTTGGGCAAAGCACCATTGGCGTATTAGACATTCTGGGGAACTATCTATGTCGGTCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460106.1
CDS-3UTR CAA 90 bp GGGAGGGGACCGAAAGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTTGGCTGTATCTTTCTTTATaGGTTTGGGGAAAACTGGAG +
Preference number: 5 (lower is better)
Translates to: GRGPKASKGRKSGGQSTWLYLSL*VWGKLE
Trigger: CTCCAGTTTTCCCCAAACCAATAAAGAAAGATACAG...CCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCTTTCGGTCCCCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000340888.8
ENST00000370150.5
CDS-3UTR CAA 90 bp CATGACCATGACACAAGCAGGACCACCCACACTCAGCGAAGCACACAACAGCCGCTGTATCTTTCTTTATaGGTTTGGGGAAAACTGGAG +
Preference number: 5 (lower is better)
Translates to: HDHDTSRTTHTQRSTQQPLYLSL*VWGKLE
Trigger: CTCCAGTTTTCCCCAAACCAATAAAGAAAGATACAG...CGGCTGTTGTGTGCTTCGCTGAGTGTGGGTGGTCCTGCTTGTGTCATGGTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340888.8
ENST00000370150.5
CDS TCA 90 bp ACCCTCGCTTTCTTCTCTACCCAGCAGCCAGAGCATTCCTTTTATTaGGATCATGTCACCCTCCTGCAGCTCTCTATGTCAATCCAAGTC +
Preference number: 5 (lower is better)
Translates to: TLAFFSTQQPEHSFY*DHVTLLQLSMSIQV
Trigger: GACTTGGATTGACATAGAGAGCTGCAGGAGGGTGACATGATCTCAATAAAAGGAATGCTCTGGCTGCTGGGTAGAGAAGAAAGCGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447676.6
ENST00000462280.1
CDS GCA 72 bp GCAGCAGCATGTCTGCGACCCCCGCGCGCAGCCACCTaGCAAGACCGCGGCCACCCACGCGGCCGCAGACGC +
Preference number: 6 (lower is better)
Translates to: AAACLRPPRAAT*QDRGHPRGRRR
Trigger: GCGTCTGCGGCCGCGTGGGTGGCCGCGGTCTTGGCAGGTGGCTGCGCGCGGGGGTCGCAGACATGCTGCTGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370150.5
ENST00000475172.5
CDS GCA 72 bp GGAGCTGCGGCCCGGCTGGGCCGGCCCCAGGGCCTTTaGACCACCGGTGGCTGTCTCCCGGAGAGCTCTTCG +
Preference number: 6 (lower is better)
Translates to: GAAARLGRPQGL*TTGGCLPESSS
Trigger: CGAAGAGCTCTCCGGGAGACAGCCACCGGTGGTGCAAAGGCCCTGGGGCCGGCCCAGCCGGGCCGCAGCTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447676.6
ENST00000462280.1
CDS CCA 72 bp CACTTGAGGGCCACGAGGTGTGCGGAGCCCCGCTCCTaGGCCAGCACCACCTCGGAGAAGGCACCCGAGCCG +
Preference number: 6 (lower is better)
Translates to: HLRATRCAEPRS*ASTTSEKAPEP
Trigger: CGGCTCGGGTGCCTTCTCCGAGGTGGTGCTGGCCCAGGAGCGGGGCTCCGCACACCTCGTGGCCCTCAAGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000418241.5
ENST00000419804.5
ENST00000422811.5
ENST00000425526.5
ENST00000433470.5
ENST00000434652.5
ENST00000439087.5
ENST00000447676.6
ENST00000458354.5
ENST00000463548.1
ENST00000465303.5
ENST00000466074.5
ENST00000475172.5
ENST00000488168.5
ENST00000488994.5
ENST00000489536.5
CDS GCA 72 bp GGCCTTCTTGGGGATGCACTTGAGGGCCACGAGGTGTaGGGAGCCCCGCTCCTGGGCCAGCACCACCTCGGA +
Preference number: 6 (lower is better)
Translates to: GLLGDALEGHEV*GAPLLGQHHLG
Trigger: TCCGAGGTGGTGCTGGCCCAGGAGCGGGGCTCCGCACACCTCGTGGCCCTCAAGTGCATCCCCAAGAAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 23 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000418241.5
ENST00000419804.5
ENST00000422811.5
ENST00000425526.5
ENST00000433470.5
ENST00000434652.5
ENST00000439087.5
ENST00000447676.6
ENST00000458354.5
ENST00000463548.1
ENST00000465303.5
ENST00000466074.5
ENST00000466638.5
ENST00000466662.1
ENST00000472324.5
ENST00000475172.5
ENST00000488168.5
ENST00000488994.5
ENST00000489536.5
CDS GCA 72 bp TCCCCCGCACCCCGAAGGCGACCAGCGCCTGGATGCTaGCTCTCTGCCTCCACACATCCGGCCGCTTTCCAG +
Preference number: 6 (lower is better)
Translates to: SPAPRRRPAPGC*LSASTHPAAFQ
Trigger: CTGGAAAGCGGCCGGATGTGTGGAGGCAGAGAGGCAGCATCCAGGCGCTGGTCGCCTTCGGGGTGCGGGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439087.5
CDS GCA 72 bp ATGCCCTGCTCAGAGGCCCCCTCGCCCTCTGGGATCTaGCCCAGCTTCCGGATGTGGCGCAGGAACGAGGTG +
Preference number: 6 (lower is better)
Translates to: MPCSEAPSPSGI*PSFRMWRRNEV
Trigger: CACCTCGTTCCTGCGCCACATCCGGAAGCTGGGGCAGATCCCAGAGGGCGAGGGGGCCTCTGAGCAGGGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000438984.5
ENST00000447676.6
ENST00000466074.5
ENST00000472324.5
CDS TCA 72 bp CCAGTCTCTGCCTTCACCGCCTCTCCGAGGACAGGCTaGCCCGGCCACTTGCCCGAAAGCAGCCTCCATGCC +
Preference number: 6 (lower is better)
Translates to: PVSAFTASPRTG*PGHLPESSLHA
Trigger: GGCATGGAGGCTGCTTTCGGGCAAGTGGCCGGGTCAGCCTGTCCTCGGAGAGGCGGTGAAGGCAGAGACTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447676.6
ENST00000462280.1
CDS GCA 72 bp TCACCGCCTCTCCGAGGACAGGCTGACCCGGCCACTTaGCCGAAAGCAGCCTCCATGCCTAGCTCCAGGACC +
Preference number: 6 (lower is better)
Translates to: SPPLRGQADPAT*PKAASMPSSRT
Trigger: GGTCCTGGAGCTAGGCATGGAGGCTGCTTTCGGGCAAGTGGCCGGGTCAGCCTGTCCTCGGAGAGGCGGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447676.6
ENST00000462280.1
CDS GCA 72 bp GTCCCGAAGGCGACCAGCGCCTGGATGCTGCCTCTCTaGCTCCACACATCCGGCCGCTTTCCAGAAGGCTCC +
Preference number: 6 (lower is better)
Translates to: VPKATSAWMLPL*LHTSGRFPEGS
Trigger: GGAGCCTTCTGGAAAGCGGCCGGATGTGTGGAGGCAGAGAGGCAGCATCCAGGCGCTGGTCGCCTTCGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463548.1
CDS CAA 90 bp AAGCGCCTACGGAGCACTGCGATCTCGTTCTCCACCAGGGCCTCCTaGCCCCGGAGGGCCTTCTTGGGGATGCACTTGAGGGCCACGAGG +
Preference number: 6 (lower is better)
Translates to: KRLRSTAISFSTRAS*PRRAFLGMHLRATR
Trigger: CCTCGTGGCCCTCAAGTGCATCCCCAAGAAGGCCCTCCGGGGCAAGGAGGCCCTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGCGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418241.5
ENST00000433470.5
CDS GCA 72 bp CGGAGAGCTCTTCGGCCACAGGTCGGCAAGGCTCTCTaGCTTCCAGTCTCTGCCTTCACCGCCTCTCCGAGG +
Preference number: 6 (lower is better)
Translates to: RRALRPQVGKAL*LPVSAFTASPR
Trigger: CCTCGGAGAGGCGGTGAAGGCAGAGACTGGAAGGCAGAGAGCCTTGCCGACCTGTGGCCGAAGAGCTCTCCG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000447676.6
ENST00000462280.1
CDS GCA 72 bp GGACACCGGGAAAAGGGCCAGTCAGTCCTGACGCGGTaGCGGTGCTGGGACAGGATGGGGACTAGGCACTCT +
Preference number: 6 (lower is better)
Translates to: GHREKGQSVLTR*RCWDRMGTRHS
Trigger: AGAGTGCCTAGTCCCCATCCTGTCCCAGCACCGGCACCGCGTCAGGACTGACTGGCCCTTTTCCCGGTGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465303.5
ENST00000472324.5
ENST00000473680.1
ENST00000488168.5
CDS GCA 72 bp AGCAGCATGTCCCGAAGGCGACCAGCGCCTGGATGCTaGCTCTCTGCCTCCACACATCCGGCCGCTTTCCAG +
Preference number: 6 (lower is better)
Translates to: SSMSRRRPAPGC*LSASTHPAAFQ
Trigger: CTGGAAAGCGGCCGGATGTGTGGAGGCAGAGAGGCAGCATCCAGGCGCTGGTCGCCTTCGGGACATGCTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463548.1
CDS CCA 72 bp CCCTCGCCCTCTGGGATCTGCCCCAGCTTCCGGATGTaGCGCAGGAACGAGGTGGCATTGAAGGCTCGCTTC +
Preference number: 6 (lower is better)
Translates to: PSPSGICPSFRM*RRNEVALKARF
Trigger: GAAGCGAGCCTTCAATGCCACCTCGTTCCTGCGCCACATCCGGAAGCTGGGGCAGATCCCAGAGGGCGAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000438984.5
ENST00000447676.6
ENST00000466074.5
ENST00000472324.5
CDS CAA 90 bp CTGATCCTACGGAGCACTGCGATCTCGTTCTCCACCAGGGCCTCCTaGCCCCGGAGGGCCTTCTTGGGGATGCACTTGAGGGCCACGAGG +
Preference number: 6 (lower is better)
Translates to: LILRSTAISFSTRAS*PRRAFLGMHLRATR
Trigger: CCTCGTGGCCCTCAAGTGCATCCCCAAGAAGGCCCTCCGGGGCAAGGAGGCCCTGGTGGAGAACGAGATCGCAGTGCTCCGTAGGATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 22 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000411968.5
ENST00000419804.5
ENST00000422811.5
ENST00000425526.5
ENST00000434652.5
ENST00000439087.5
ENST00000447676.6
ENST00000458354.5
ENST00000463548.1
ENST00000465303.5
ENST00000466074.5
ENST00000466638.5
ENST00000466662.1
ENST00000472324.5
ENST00000475172.5
ENST00000488168.5
ENST00000488994.5
ENST00000489536.5
CDS GCA 72 bp CGGGAAAAGGGCCAGTCAGTCCTGACGCGGTGCCGGTaGTGGGACAGGATGGGGACTAGGCACTCTCAGGTT +
Preference number: 6 (lower is better)
Translates to: REKGQSVLTRCR*WDRMGTRHSQV
Trigger: AACCTGAGAGTGCCTAGTCCCCATCCTGTCCCAGCACCGGCACCGCGTCAGGACTGACTGGCCCTTTTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000463548.1
ENST00000465303.5
ENST00000472324.5
ENST00000473680.1
ENST00000488168.5
CDS CCA 72 bp GAAAAGGGCCAGTCAGTCCTGACGCGGTGCCGGTGCTaGGACAGGATGGGGACTAGGCACTCTCAGGTTCCC +
Preference number: 6 (lower is better)
Translates to: EKGQSVLTRCRC*DRMGTRHSQVP
Trigger: GGGAACCTGAGAGTGCCTAGTCCCCATCCTGTCCCAGCACCGGCACCGCGTCAGGACTGACTGGCCCTTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000463548.1
ENST00000465303.5
ENST00000472324.5
ENST00000473680.1
ENST00000488168.5
CDS CCA 72 bp CCCCCTCGCTGCTCGCCATCCAGTCCCATGAGGTTGTaGCCAGCATCACAAGGGTTCCGTCAAGTGACCGTG +
Preference number: 6 (lower is better)
Translates to: PPRCSPSSPMRL*PASQGFRQVTV
Trigger: CACGGTCACTTGACGGAACCCTTGTGATGCTGGCCACAACCTCATGGGACTGGATGGCGAGCAGCGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418241.5
ENST00000460106.1
CDS TCA 72 bp CAGAGATCCAAAGGTGCCGCAAGGCCTGTTGGCAGGTaGACCTCTTCTGGGGGTCTCGCTCCAGAAGGTGCC +
Preference number: 6 (lower is better)
Translates to: QRSKGAARPVGR*TSSGGLAPEGA
Trigger: GGCACCTTCTGGAGCGAGACCCCCAGAAGAGGTTCACCTGCCAACAGGCCTTGCGGCACCTTTGGATCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
ENST00000466074.5
ENST00000472324.5
ENST00000488994.5
CDS GCA 72 bp CCCCGGCCACACTGGCCTCCTGACGGCCCTAGCCTTTaGTCCCCTGCCTGGAATGTTCTTCGATCAGATATC +
Preference number: 6 (lower is better)
Translates to: PRPHWPPDGPSL*SPAWNVLRSDI
Trigger: GATATCTGATCGAAGAACATTCCAGGCAGGGGAGCAAAGGCTAGGGCCGTCAGGAGGCCAGTGTGGCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462280.1
CDS CCA 72 bp GTGTCCCCAGAGATCCAAAGGTGCCGCAAGGCCTGTTaGCAGGTGAACCTCTTCTGGGGGTCTCGCTCCAGA +
Preference number: 6 (lower is better)
Translates to: VSPEIQRCRKAC*QVNLFWGSRSR
Trigger: TCTGGAGCGAGACCCCCAGAAGAGGTTCACCTGCCAACAGGCCTTGCGGCACCTTTGGATCTCTGGGGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
ENST00000466074.5
ENST00000472324.5
ENST00000488994.5
CDS TCA 72 bp CCGAGCCGAGCCTCTCGCGGATCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCTTCAGCAGCAGCATGT +
Preference number: 6 (lower is better)
Translates to: PSRASRGSRRRC*CPPCVSSAAAC
Trigger: ACATGCTGCTGCTGAAGAAACACACGGAGGACATCAGCAGCGTCTACGAGATCCGCGAGAGGCTCGGCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000418241.5
ENST00000419804.5
ENST00000422811.5
ENST00000423545.1
ENST00000425526.5
ENST00000433470.5
ENST00000434652.5
ENST00000439087.5
ENST00000447676.6
ENST00000458354.5
ENST00000463548.1
ENST00000465303.5
ENST00000466074.5
ENST00000472324.5
ENST00000475172.5
ENST00000488168.5
ENST00000488994.5
ENST00000489536.5
CDS TCA 72 bp CGTGGACATCCTCCAGAGCGACGATGTTGGGGTGACTaGTCCTGCAATGGCAAGGAAGCGCCTACGGAGCAC +
Preference number: 6 (lower is better)
Translates to: RGHPPERRCWGD*SCNGKEAPTEH
Trigger: GTGCTCCGTAGGCGCTTCCTTGCCATTGCAGGATCAGTCACCCCAACATCGTCGCTCTGGAGGATGTCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418241.5
ENST00000433470.5
CDS TCA 72 bp CTCAAAGGGCGTGGCATACAGGAGGTTTTCGGGCTGTaGCACACGGACACCGGGAAAAGGGCCAGTCAGTCC +
Preference number: 6 (lower is better)
Translates to: LKGRGIQEVFGL*HTDTGKRASQS
Trigger: GGACTGACTGGCCCTTTTCCCGGTGTCCGTGTGTCACAGCCCGAAAACCTCCTGTATGCCACGCCCTTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465303.5
ENST00000472324.5
ENST00000473680.1
ENST00000488168.5
CDS GCA 72 bp TCACTGGCTCGGCATATCCAGGGGTCCCACAGGCGGTaGCTAGCATGTTCCCAGCCTGGATTTTGGAGAGTC +
Preference number: 6 (lower is better)
Translates to: SLARHIQGSHRR*LACSQPGFWRV
Trigger: GACTCTCCAAAATCCAGGCTGGGAACATGCTAGGCACCGCCTGTGGGACCCCTGGATATGCCGAGCCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370142.5
CDS CCA 72 bp AGCATCACAAGGGTTCCGTCAAGTGACCGTGGGCCCTaGCATGACACGACGTCTTCAAGAGAGTCCACGGGG +
Preference number: 6 (lower is better)
Translates to: SITRVPSSDRGP*HDTTSSRESTG
Trigger: CCCCGTGGACTCTCTTGAAGACGTCGTGTCATGCCAGGGCCCACGGTCACTTGACGGAACCCTTGTGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418241.5
CDS CAA 72 bp AGCATCCAAGGGAAGGAAATCTGGGGGTCAGTCCACTaGGCCTCGGCATCTGCCTGGGCATCACCACTTGGG +
Preference number: 6 (lower is better)
Translates to: SIQGKEIWGSVH*ASASAWASPLG
Trigger: CCCAAGTGGTGATGCCCAGGCAGATGCCGAGGCCAAGTGGACTGACCCCCAGATTTCCTTCCCTTGGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000447676.6
ENST00000466074.5
ENST00000472324.5
CDS TCA 72 bp TCGAGCCGAGCCTCTCGCGGATCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCTTCAGCAGCAGCATGT +
Preference number: 6 (lower is better)
Translates to: SSRASRGSRRRC*CPPCVSSAAAC
Trigger: ACATGCTGCTGCTGAAGAAACACACGGAGGACATCAGCAGCGTCTACGAGATCCGCGAGAGGCTCGGCTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411968.5
CDS TCA 72 bp CTCTCGTGGACATCCTCCAGAGCGACGATGTTGGGGTaGCTGATCCTGCAATGGCAAGGAAGCGCCTACGGA +
Preference number: 6 (lower is better)
Translates to: LSWTSSRATMLG*LILQWQGSAYG
Trigger: TCCGTAGGCGCTTCCTTGCCATTGCAGGATCAGTCACCCCAACATCGTCGCTCTGGAGGATGTCCACGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418241.5
ENST00000433470.5
CDS TCA 72 bp ACGAGCCGAGCCTCTCGCGGATCTCGTAGACGCTGCTaGTGTCCTCCGTGTGTTTCTTCAGCAGCAGCATGT +
Preference number: 6 (lower is better)
Translates to: TSRASRGSRRRC*CPPCVSSAAAC
Trigger: ACATGCTGCTGCTGAAGAAACACACGGAGGACATCAGCAGCGTCTACGAGATCCGCGAGAGGCTCGGCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462280.1
ENST00000466638.5
CDS GCA 72 bp CAGGTGAACCTCTTCTGGGGGTCTCGCTCCAGAAGGTaGCGGATGAAGTCTTTGGCTGATTCTGAGATGTCA +
Preference number: 6 (lower is better)
Translates to: QVNLFWGSRSRR*RMKSLADSEMS
Trigger: TGACATCTCAGAATCAGCCAAAGACTTCATCCGGCACCTTCTGGAGCGAGACCCCCAGAAGAGGTTCACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000340888.8
ENST00000370142.5
ENST00000370145.8
ENST00000370150.5
ENST00000447676.6
ENST00000466074.5
ENST00000472324.5
ENST00000488994.5
CDS CCA 72 bp AGCATCACAAGGGTTCCGTCAAGTGACCGTGGGCCCTaGCATGACACGACGTCTGCTCCTCTATGTGAAAAT +
Preference number: 6 (lower is better)
Translates to: SITRVPSSDRGP*HDTTSAPLCEN
Trigger: ATTTTCACATAGAGGAGCAGACGTCGTGTCATGCCAGGGCCCACGGTCACTTGACGGAACCCTTGTGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460106.1
CDS TCA 72 bp AACCCAACCAAGACGAGCCCAGGAAATAAGTGCGGGTaGCCGAATTCAATCCTGCATCCAACAGTTACTGGA +
Preference number: 6 (lower is better)
Translates to: NPTKTSPGNKCG*PNSILHPTVTG
Trigger: TCCAGTAACTGTTGGATGCAGGATTGAATTCGGTCACCCGCACTTATTTCCTGGGCTCGTCTTGGTTGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418241.5
ENST00000460106.1
CDS CAA 90 bp CACCCTCGCTTTCTTCTCTACCCAGCAGCCAGAGCATTCCTTTTATaGAGATCATGTCACCCTCCTGCAGCTCTCTATGTCAATCCAAGT +
Preference number: 6 (lower is better)
Translates to: HPRFLLYPAARAFLL*RSCHPPAALYVNPS
Trigger: ACTTGGATTGACATAGAGAGCTGCAGGAGGGTGACATGATCTCAATAAAAGGAATGCTCTGGCTGCTGGGTAGAGAAGAAAGCGAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447676.6
ENST00000462280.1
CDS TCA 72 bp TTCTTCTCTACCCAGCAGCCAGAGCATTCCTTTTATTaGGATCATGTCACCCTCCTGCAGCTCTCTATGTCA +
Preference number: 6 (lower is better)
Translates to: FFSTQQPEHSFY*DHVTLLQLSMS
Trigger: TGACATAGAGAGCTGCAGGAGGGTGACATGATCTCAATAAAAGGAATGCTCTGGCTGCTGGGTAGAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000447676.6
ENST00000462280.1
CDS GCA 72 bp ATAGATAGTTCCCCAGAATGTCTAATACGCCAATGGTaGTTTGCCCAAGCAGAGTTCTACAACATGGTCTTC +
Preference number: 6 (lower is better)
Translates to: IDSSPECLIRQW*FAQAEFYNMVF
Trigger: GAAGACCATGTTGTAGAACTCTGCTTGGGCAAAGCACCATTGGCGTATTAGACATTCTGGGGAACTATCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460106.1