Pregenerated sensors for PMS2 (Homo sapiens)
Ensembl gene IDs: ENSG00000122512Ensembl transcript IDs: ENST00000265849.12, ENST00000382321.5, ENST00000406569.7, ENST00000441476.6, ENST00000642292.1, ENST00000642456.1, ENST00000643595.1, ENST00000644110.1
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGCTCAAACCGTACTCTTCACACACGGAGTCACTAGGGGGCAGCTaGACAAAAGGAATGAGGCTTTGCAACTGCTTCTGCCCAAACACA | + |
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Preference number: 1 (lower is better) Translates to: QLKPYSSHTESLGGS*TKGMRLCNCFCPNT Trigger: TGTGTTTGGGCAGAAGCAGTTGCAAAGCCTCATTCCTTTTGTTCAGCTGCCCCCTAGTGACTCCGTGTGTGAAGAGTACGGTTTGAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643595.1 |
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| 3UTR CCA 90 bp | ACACAAATTTATTACCCTACAGTATGTAAATTAGTCCCACAGTGCTaGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: TQIYYPTVCKLVPQC*FLPEAEGENAFSCL Trigger: AAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACTGTGGGACTAATTTACATACTGTAGGGTAATAAATTTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR GCA 90 bp | TCCATGGATTGGGGTCGGGGAGGGATGGTTTCAGGACGATTCAAGTaGATTGCATTTATTGTGCACTTTATTTCTACTATTATTACATTG | + |
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Preference number: 1 (lower is better) Translates to: SMDWGRGGMVSGRFK*IAFIVHFISTIITL Trigger: CAATGTAATAATAGTAGAAATAAAGTGCACAATAAATGCAATGCACTTGAATCGTCCTGAAACCATCCCTCCCCGACCCCAATCCATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR GCA 90 bp | GGATTGGGGTCGGGGAGGGATGGTTTCAGGACGATTCAAGTGCATTaGATTTATTGTGCACTTTATTTCTACTATTATTACATTGTAACA | + |
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Preference number: 1 (lower is better) Translates to: GLGSGRDGFRTIQVH*IYCALYFYYYYIVT Trigger: TGTTACAATGTAATAATAGTAGAAATAAAGTGCACAATAAATGCAATGCACTTGAATCGTCCTGAAACCATCCCTCCCCGACCCCAATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR-3UTR GCA 90 bp | CCCTTCTGCCACGTGAGGCAGCGTGGTCACAGGTTCTGGGGATTAGGACACAGCTGGGGGCTGTTATCCTaGCACAGCTCCCAATCTGGA | + |
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Preference number: 2 (lower is better) Translates to: PFCHVRQRGHRFWGLGHSWGLLS*HSSQSG Trigger: TCCAGATTGGGAGCTGTGGCAGGATAACAGCCCCCA...GCTGTGTCCTAATCCCCAGAACCTGTGACCACGCTGCCTCACGTGGCAGAAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR-3UTR TCA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCGGCGGTCGGATCACCTaGGGTCAGGAGTTCGAGACC | + |
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Preference number: 2 (lower is better) Translates to: SAGSFQRLRERMRFLAFSGGRIT*GQEFET Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCCGACCGCC...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR-3UTR TCA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCAGGCAGAGGCTGCAGTaGGCTGAGATCATGCTATTG | + |
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Preference number: 2 (lower is better) Translates to: SAGSFQRLRERMRFLAFSRQRLQ*AEIMLL Trigger: CAATAGCATGATCTCAGCTCACTGCAGCCTCTGCCT...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR-3UTR GCA 90 bp | GCATCGGAACAGCTCAAACCGTACTCTTCACACACGGAGTCACTAGGGGGCAGCAAAGGAATGAGGCTTTaGAACTGCTTCTGCCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: ASEQLKPYSSHTESLGGSKGMRL*NCFCPN Trigger: GTTTGGGCAGAAGCAGTTGCAAAGCCTCATTCCTTT...GCTGCCCCCTAGTGACTCCGTGTGTGAAGAGTACGGTTTGAGCTGTTCCGATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643595.1 |
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| 3UTR-3UTR CCA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCCGTGGTCACAGGTTCTaGGGATTAGGACACAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SAGSFQRLRERMRFLAFSRGHRF*GLGHSC Trigger: ACAGCTGTGTCCTAATCCCCAGAACCTGTGACCACG...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR-3UTR TCA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCCTGAGATCATGCTATTaGACTCCAGCCTGGGCAACA | + |
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Preference number: 2 (lower is better) Translates to: SAGSFQRLRERMRFLAFSLRSCY*TPAWAT Trigger: TGTTGCCCAGGCTGGAGTTCAATAGCATGATCTCAG...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR-3UTR TCA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCGGCTATAAATACAGATaGAGCTTCGCTGGCTTGCCG | + |
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Preference number: 2 (lower is better) Translates to: SAGSFQRLRERMRFLAFSGYKYR*SFAGLP Trigger: CGGCAAGCCAGCGAAGCTTCATCTGTATTTATAGCC...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR CAA 90 bp | TCATTCACGAGTCTGCAGACCTTTGCTGGGTCACAAGGCCGCCGGTaGATAAAGAAAAACTGTCTGTCTGTTGAACTCCTTCCAACTCCA | + |
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Preference number: 2 (lower is better) Translates to: SFTSLQTFAGSQGRR*IKKNCLSVELLPTP Trigger: TGGAGTTGGAAGGAGTTCAACAGACAGACAGTTTTTCTTTATCAACCGGCGGCCTTGTGACCCAGCAAAGGTCTGCAGACTCGTGAATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643595.1 |
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| 3UTR-3UTR TCA 90 bp | CTGTCTGTTGAACTCCTTCCAACTCCATGCGTGCATTGTGAAATGAAACCTGAGTCACTAGGGGGCAGCTaGACAAAAGGAATGAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: LSVELLPTPCVHCEMKPESLGGS*TKGMRL Trigger: AAGCCTCATTCCTTTTGTTCAGCTGCCCCCTAGTGA...CTCAGGTTTCATTTCACAATGCACGCATGGAGTTGGAAGGAGTTCAACAGACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643595.1 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTGTTGAACTCCTTCCAACTCCATGCGTGCATTGTGAAATGAAACCTGAGCGATATTTTCCTTTATaGTGGGGCTTCCACCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: LSVELLPTPCVHCEMKPERYFPL*WGFHLC Trigger: GCACAGGTGGAAGCCCCAGCATAAAGGAAAATATCG...CTCAGGTTTCATTTCACAATGCACGCATGGAGTTGGAAGGAGTTCAACAGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643595.1 |
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| 3UTR-3UTR TCA 90 bp | CTGTCTGTTGAACTCCTTCCAACTCCATGCGTGCATTGTGAAATGAAACCTGAGGCTGAACAAAAGGAATaGGGCTTTGCAACTGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: LSVELLPTPCVHCEMKPEAEQKE*GFATAS Trigger: AGAAGCAGTTGCAAAGCCTCATTCCTTTTGTTCAGC...CTCAGGTTTCATTTCACAATGCACGCATGGAGTTGGAAGGAGTTCAACAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643595.1 |
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| 3UTR CAA 90 bp | TGGATTGGGGTCGGGGAGGGATGGTTTCAGGACGATTCAAGTGCATaGCATTTATTGTGCACTTTATTTCTACTATTATTACATTGTAAC | + |
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Preference number: 2 (lower is better) Translates to: WIGVGEGWFQDDSSA*HLLCTLFLLLLHCN Trigger: GTTACAATGTAATAATAGTAGAAATAAAGTGCACAATAAATGCAATGCACTTGAATCGTCCTGAAACCATCCCTCCCCGACCCCAATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR TCA 72 bp | GCCTCTCTCTGGCCAGCAGGGAAAGGTCTCCACCTTTaGAGGACTCACCCAATGGACTGGGCCCACCCAGAC | + |
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Preference number: 3 (lower is better) Translates to: ASLWPAGKGLHL*RTHPMDWAHPD Trigger: GTCTGGGTGGGCCCAGTCCATTGGGTGAGTCCTTCAAAGGTGGAGACCTTTCCCTGCTGGCCAGAGAGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR CCA 72 bp | CCCTTCTGCCACGTGAGGCAGCGTGGTCACAGGTTCTaGGGATTAGGACACAGCTGTCTTGGGGGCTGTTAT | + |
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Preference number: 3 (lower is better) Translates to: PFCHVRQRGHRF*GLGHSCLGGCY Trigger: ATAACAGCCCCCAAGACAGCTGTGTCCTAATCCCCAGAACCTGTGACCACGCTGCCTCACGTGGCAGAAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR GCA 72 bp | GGAGTGGCTATAAATACAGATGAAGCTTCGCTGGCTTaGCGGCCCCTAACCTGCTGTGCACCCCACTTCCTA | + |
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Preference number: 3 (lower is better) Translates to: GVAINTDEASLA*RPLTCCAPHFL Trigger: TAGGAAGTGGGGTGCACAGCAGGTTAGGGGCCGGCAAGCCAGCGAAGCTTCATCTGTATTTATAGCCACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR CCA 72 bp | TGGTCACAGGTTCTGGGGATTAGGACACAGCTGTCTTaGGGGCTGTTATCCTGCCACAGCTCCCAATCTGGA | + |
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Preference number: 3 (lower is better) Translates to: WSQVLGIRTQLS*GLLSCHSSQSG Trigger: TCCAGATTGGGAGCTGTGGCAGGATAACAGCCCCCAAGACAGCTGTGTCCTAATCCCCAGAACCTGTGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR-3UTR CAA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCCGGTCCCCAACCTTTTaGGCACCAGAGACCGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: SAGSFQRLRERMRFLAFSRSPTF*APETGF Trigger: GAAACCGGTCTCTGGTGCCAAAAAGGTTGGGGACCG...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR CCA 72 bp | CCTAACCTGCTGTGCACCCCACTTCCTAATAGGCCATaGACCACTACTGGTCTGTGTCCGGAGTGTTGGAAT | + |
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Preference number: 3 (lower is better) Translates to: PNLLCTPLPNRP*TTTGLCPECWN Trigger: ATTCCAACACTCCGGACACAGACCAGTAGTGGTCCATGGCCTATTAGGAAGTGGGGTGCACAGCAGGTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR TCA 72 bp | CTACAACTCACCATCACAGAGACTCAGTGGGAGCCCTaGGCTTGTTTTCCTGCAACTAGACAGCCCCATCTG | + |
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Preference number: 3 (lower is better) Translates to: LQLTITETQWEP*ACFPATRQPHL Trigger: CAGATGGGGCTGTCTAGTTGCAGGAAAACAAGCTCAGGGCTCCCACTGAGTCTCTGTGATGGTGAGTTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR TCA 72 bp | CCGTACTCTTCACACACGGAGTCACTAGGGGGCAGCTaGACAAAAGGAATGAGGCTTTGCAACTGCTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: PYSSHTESLGGS*TKGMRLCNCFC Trigger: GCAGAAGCAGTTGCAAAGCCTCATTCCTTTTGTTCAGCTGCCCCCTAGTGACTCCGTGTGTGAAGAGTACGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643595.1 |
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| 3UTR GCA 72 bp | GCTTCTGCCCAAACACAGAGCCGATATTTTCCTTTATaGTGGGGCTTCCACCTGTGCATACCACAGGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: ASAQTQSRYFPL*WGFHLCIPQAV Trigger: GACAGCCTGTGGTATGCACAGGTGGAAGCCCCAGCATAAAGGAAAATATCGGCTCTGTGTTTGGGCAGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643595.1 |
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| 3UTR CCA 72 bp | GAGACCGGTTTCGCGGAACACAATTTTTCCATGGATTaGGGTCGGGGAGGGATGGTTTCAGGACGATTCAAG | + |
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Preference number: 3 (lower is better) Translates to: ETGFAEHNFSMD*GRGGMVSGRFK Trigger: CTTGAATCGTCCTGAAACCATCCCTCCCCGACCCCAATCCATGGAAAAATTGTGTTCCGCGAAACCGGTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR GCA 72 bp | CTGTGTCCGGAGTGTTGGAATCCCTGTTCTAGAGACTaGTTGCAATCCTTGACTAGTGGTACCTCCTTCCAT | + |
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Preference number: 3 (lower is better) Translates to: LCPECWNPCSRD*LQSLTSGTSFH Trigger: ATGGAAGGAGGTACCACTAGTCAAGGATTGCAAGCAGTCTCTAGAACAGGGATTCCAACACTCCGGACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR TCA 72 bp | GTTGGAATCCCTGTTCTAGAGACTGCTTGCAATCCTTaGCTAGTGGTACCTCCTTCCATCTCCAAAACCAGC | + |
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Preference number: 3 (lower is better) Translates to: VGIPVLETACNP*LVVPPSISKTS Trigger: GCTGGTTTTGGAGATGGAAGGAGGTACCACTAGTCAAGGATTGCAAGCAGTCTCTAGAACAGGGATTCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR-3UTR CAA 90 bp | CTGTCTGTTGAACTCCTTCCAACTCCATGCGTGCATTGTGAAATGAAACCTGAGAGGCTGTCGTTTTCCTaGTCCAAGCTGATTGGTGCA | + |
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Preference number: 3 (lower is better) Translates to: LSVELLPTPCVHCEMKPERLSFS*SKLIGA Trigger: TGCACCAATCAGCTTGGACAAGGAAAACGACAGCCT...CTCAGGTTTCATTTCACAATGCACGCATGGAGTTGGAAGGAGTTCAACAGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643595.1 |
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| 3UTR-3UTR CAA 90 bp | CTGTCTGTTGAACTCCTTCCAACTCCATGCGTGCATTGTGAAATGAAACCTGAGAAAAGGAATGAGGCTTaGCAACTGCTTCTGCCCAAA | + |
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Preference number: 3 (lower is better) Translates to: LSVELLPTPCVHCEMKPEKRNEA*QLLLPK Trigger: TTTGGGCAGAAGCAGTTGCAAAGCCTCATTCCTTTT...CTCAGGTTTCATTTCACAATGCACGCATGGAGTTGGAAGGAGTTCAACAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643595.1 |
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| 3UTR GCA 72 bp | ATTTATTACCCTACAGTATGTAAATTAGTCCCACAGTaGTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCG | + |
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Preference number: 3 (lower is better) Translates to: IYYPTVCKLVPQ*WFLPEAEGENA Trigger: CGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACTGTGGGACTAATTTACATACTGTAGGGTAATAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR GCA 72 bp | TGGGGTCGGGGAGGGATGGTTTCAGGACGATTCAAGTaGATTGCATTTATTGTGCACTTTATTTCTACTATT | + |
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Preference number: 3 (lower is better) Translates to: WGRGGMVSGRFK*IAFIVHFISTI Trigger: AATAGTAGAAATAAAGTGCACAATAAATGCAATGCACTTGAATCGTCCTGAAACCATCCCTCCCCGACCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| 3UTR GCA 72 bp | TCGGGGAGGGATGGTTTCAGGACGATTCAAGTGCATTaGATTTATTGTGCACTTTATTTCTACTATTATTAC | + |
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Preference number: 3 (lower is better) Translates to: SGRDGFRTIQVH*IYCALYFYYYY Trigger: GTAATAATAGTAGAAATAAAGTGCACAATAAATGCAATGCACTTGAATCGTCCTGAAACCATCCCTCCCCGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| CDS-3UTR TCA 90 bp | CCCTTCTGCCACGTGAGGCAGCGTGGTCACAGGTTCTGGGGATTAGGACACAGCGGCGGTCGGATCACCTaGGGTCAGGAGTTCGAGACC | + |
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Preference number: 4 (lower is better) Translates to: PFCHVRQRGHRFWGLGHSGGRIT*GQEFET Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCCGACCGCC...GCTGTGTCCTAATCCCCAGAACCTGTGACCACGCTGCCTCACGTGGCAGAAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| CDS-3UTR TCA 90 bp | CCCTTCTGCCACGTGAGGCAGCGTGGTCACAGGTTCTGGGGATTAGGACACAGCAGCCCCATCTGGGGGTaGCGGGAGACAGTGACAGAT | + |
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Preference number: 4 (lower is better) Translates to: PFCHVRQRGHRFWGLGHSSPIWG*RETVTD Trigger: ATCTGTCACTGTCTCCCGTCACCCCCAGATGGGGCT...GCTGTGTCCTAATCCCCAGAACCTGTGACCACGCTGCCTCACGTGGCAGAAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| CDS-3UTR GCA 90 bp | CCCTTCTGCCACGTGAGGCAGCGTGGTCACAGGTTCTGGGGATTAGGACACAGCGAGTCTGCAGACCTTTaGTGGGTCACAAGGCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: PFCHVRQRGHRFWGLGHSESADL*WVTRPP Trigger: CGGCGGCCTTGTGACCCAGCAAAGGTCTGCAGACTC...GCTGTGTCCTAATCCCCAGAACCTGTGACCACGCTGCCTCACGTGGCAGAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| CDS-3UTR GCA 90 bp | CCCTTCTGCCACGTGAGGCAGCGTGGTCACAGGTTCTGGGGATTAGGACACAGCCTGGGAGGCAGAGGCTaGAGTGAGCTGAGATCATGC | + |
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Preference number: 4 (lower is better) Translates to: PFCHVRQRGHRFWGLGHSLGGRG*SELRSC Trigger: GCATGATCTCAGCTCACTGCAGCCTCTGCCTCCCAG...GCTGTGTCCTAATCCCCAGAACCTGTGACCACGCTGCCTCACGTGGCAGAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| CDS-3UTR GCA 90 bp | CCCTTCTGCCACGTGAGGCAGCGTGGTCACAGGTTCTGGGGATTAGGACACAGCTTCAAGCGATTCTCCTaGCTCAGCCTCCTGGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: PFCHVRQRGHRFWGLGHSFKRFS*LSLLGS Trigger: GCTACCCAGGAGGCTGAGGCAGGAGAATCGCTTGAA...GCTGTGTCCTAATCCCCAGAACCTGTGACCACGCTGCCTCACGTGGCAGAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| CDS-3UTR CCA 90 bp | CCCTTCTGCCACGTGAGGCAGCGTGGTCACAGGTTCTGGGGATTAGGACACAGCGGGGTCGGGGAGGGATaGTTTCAGGACGATTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: PFCHVRQRGHRFWGLGHSGVGEG*FQDDSS Trigger: ACTTGAATCGTCCTGAAACCATCCCTCCCCGACCCC...GCTGTGTCCTAATCCCCAGAACCTGTGACCACGCTGCCTCACGTGGCAGAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| CDS-3UTR GCA 90 bp | CCCTTCTGCCACGTGAGGCAGCGTGGTCACAGGTTCTGGGGATTAGGACACAGCCCTCATTCACGAGTCTaGAGACCTTTGCTGGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: PFCHVRQRGHRFWGLGHSPHSRV*RPLLGH Trigger: GTGACCCAGCAAAGGTCTGCAGACTCGTGAATGAGG...GCTGTGTCCTAATCCCCAGAACCTGTGACCACGCTGCCTCACGTGGCAGAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| CDS-3UTR CCA 90 bp | CCCTTCTGCCACGTGAGGCAGCGTGGTCACAGGTTCTGGGGATTAGGACACAGCTTAGTCCCACAGTGCTaGTTCCTTCCAGAGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: PFCHVRQRGHRFWGLGHSLVPQC*FLPEAE Trigger: CTCAGCCTCTGGAAGGAACCAGCACTGTGGGACTAA...GCTGTGTCCTAATCCCCAGAACCTGTGACCACGCTGCCTCACGTGGCAGAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| CDS-3UTR GCA 90 bp | CCCTTCTGCCACGTGAGGCAGCGTGGTCACAGGTTCTGGGGATTAGGACACAGCGTCCAAGCTGATTGGTaGAACTTACACGGATGCCTG | + |
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Preference number: 4 (lower is better) Translates to: PFCHVRQRGHRFWGLGHSVQADW*NLHGCL Trigger: CAGGCATCCGTGTAAGTTGCACCAATCAGCTTGGAC...GCTGTGTCCTAATCCCCAGAACCTGTGACCACGCTGCCTCACGTGGCAGAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| CDS-3UTR GCA 90 bp | GCATCGGAACAGCTCAAACCGTACTCTTCACACACGGAGTCACTAGGGGGCAGCTGGGGCTTCCACCTGTaGATACCACAGGCTGTCGTT | + |
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Preference number: 4 (lower is better) Translates to: ASEQLKPYSSHTESLGGSWGFHL*IPQAVV Trigger: AACGACAGCCTGTGGTATGCACAGGTGGAAGCCCCA...GCTGCCCCCTAGTGACTCCGTGTGTGAAGAGTACGGTTTGAGCTGTTCCGATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643595.1 |
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| CDS-3UTR CCA 90 bp | CAGGTTCTGGGGATTAGGACACAGCTGTCTTGGGGGCTGTTATCCTGCCACAGCAGGACACAGCTGTCTTaGGGGCTGTTATCCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: QVLGIRTQLSWGLLSCHSRTQLS*GLLSCH Trigger: GTGGCAGGATAACAGCCCCCAAGACAGCTGTGTCCT...GCTGTGGCAGGATAACAGCCCCCAAGACAGCTGTGTCCTAATCCCCAGAACCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| CDS-3UTR TCA 90 bp | CCCTTCTGCCACGTGAGGCAGCGTGGTCACAGGTTCTGGGGATTAGGACACAGCTTTCCTTGTCCAAGCTaGTTGGTGCAACTTACACGG | + |
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Preference number: 4 (lower is better) Translates to: PFCHVRQRGHRFWGLGHSFPCPS*LVQLTR Trigger: CCGTGTAAGTTGCACCAATCAGCTTGGACAAGGAAA...GCTGTGTCCTAATCCCCAGAACCTGTGACCACGCTGCCTCACGTGGCAGAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| CDS-3UTR GCA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCTGCCGGCCCCTAACCTaGTGTGCACCCCACTTCCTA | + |
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Preference number: 4 (lower is better) Translates to: SAGSFQRLRERMRFLAFSCRPLT*CAPHFL Trigger: TAGGAAGTGGGGTGCACAGCAGGTTAGGGGCCGGCA...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| CDS-3UTR TCA 90 bp | CAGGTTCTGGGGATTAGGACACAGCTGTCTTGGGGGCTGTTATCCTGCCACAGCTCACTAGGGGGCAGCTaGACAAAAGGAATGAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: QVLGIRTQLSWGLLSCHSSLGGS*TKGMRL Trigger: AAGCCTCATTCCTTTTGTTCAGCTGCCCCCTAGTGA...GCTGTGGCAGGATAACAGCCCCCAAGACAGCTGTGTCCTAATCCCCAGAACCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| CDS-3UTR TCA 90 bp | CAGGTTCTGGGGATTAGGACACAGCTGTCTTGGGGGCTGTTATCCTGCCACAGCCTGAGATCATGCTATTaGACTCCAGCCTGGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: QVLGIRTQLSWGLLSCHSLRSCY*TPAWAT Trigger: TGTTGCCCAGGCTGGAGTTCAATAGCATGATCTCAG...GCTGTGGCAGGATAACAGCCCCCAAGACAGCTGTGTCCTAATCCCCAGAACCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR TCA 90 bp | CAGGTTCTGGGGATTAGGACACAGCTGTCTTGGGGGCTGTTATCCTGCCACAGCGAGGCTGCAGTGAGCTaGGATCATGCTATTGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: QVLGIRTQLSWGLLSCHSEAAVS*DHAIEL Trigger: GAGTTCAATAGCATGATCTCAGCTCACTGCAGCCTC...GCTGTGGCAGGATAACAGCCCCCAAGACAGCTGTGTCCTAATCCCCAGAACCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR TCA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCGGGCTCGTGCTGCTATaGGAATCTAATGCCCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: SAGSFQRLRERMRFLAFSGLVLL*ESNAHR Trigger: GCGGTGGGCATTAGATTCTCATAGCAGCACGAGCCC...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTTATGCTGGGGCTTCCACCTGTGCATACCACAGGCTGTCGTTTTCCTTGAGTCTGCAGACCTTTaGTGGGTCACAAGGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FPLCWGFHLCIPQAVVFLESADL*WVTRPP Trigger: CGGCGGCCTTGTGACCCAGCAAAGGTCTGCAGACTC...AAGGAAAACGACAGCCTGTGGTATGCACAGGTGGAAGCCCCAGCATAAAGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643595.1 |
||
| CDS-3UTR CCA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCTCTGCAGACCTTTGCTaGGTCACAAGGCCGCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SAGSFQRLRERMRFLAFSSADLC*VTRPPV Trigger: AACCGGCGGCCTTGTGACCCAGCAAAGGTCTGCAGA...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR CCA 90 bp | CAGGTTCTGGGGATTAGGACACAGCTGTCTTGGGGGCTGTTATCCTGCCACAGCCTGTGTCCGGAGTGTTaGAATCCCTGTTCTAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QVLGIRTQLSWGLLSCHSLCPEC*NPCSRD Trigger: GTCTCTAGAACAGGGATTCCAACACTCCGGACACAG...GCTGTGGCAGGATAACAGCCCCCAAGACAGCTGTGTCCTAATCCCCAGAACCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR GCA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCTGGGGCTTCCACCTGTaGATACCACAGGCTGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SAGSFQRLRERMRFLAFSWGFHL*IPQAVV Trigger: AACGACAGCCTGTGGTATGCACAGGTGGAAGCCCCA...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR GCA 90 bp | CAGGTTCTGGGGATTAGGACACAGCTGTCTTGGGGGCTGTTATCCTGCCACAGCCTTTGCAACTGCTTCTaGCCAAACACAGAGCCGATA | + |
|
Preference number: 4 (lower is better) Translates to: QVLGIRTQLSWGLLSCHSLCNCF*PNTEPI Trigger: TATCGGCTCTGTGTTTGGGCAGAAGCAGTTGCAAAG...GCTGTGGCAGGATAACAGCCCCCAAGACAGCTGTGTCCTAATCCCCAGAACCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR GCA 90 bp | CCCTTCTGCCACGTGAGGCAGCGTGGTCACAGGTTCTGGGGATTAGGACACAGCCTCCTTCCAACTCCATaGGTGCATTGTGAAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PFCHVRQRGHRFWGLGHSLLPTP*VHCEMK Trigger: TTTCATTTCACAATGCACGCATGGAGTTGGAAGGAG...GCTGTGTCCTAATCCCCAGAACCTGTGACCACGCTGCCTCACGTGGCAGAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR GCA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCGCCCCTAACCTGCTGTaGACCCCACTTCCTAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAGSFQRLRERMRFLAFSAPNLL*TPLPNR Trigger: CCTATTAGGAAGTGGGGTGCACAGCAGGTTAGGGGC...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR GCA 90 bp | CAGGTTCTGGGGATTAGGACACAGCTGTCTTGGGGGCTGTTATCCTGCCACAGCAAATTAGTCCCACAGTaGTGGTTCCTTCCAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QVLGIRTQLSWGLLSCHSKLVPQ*WFLPEA Trigger: AGCCTCTGGAAGGAACCAGCACTGTGGGACTAATTT...GCTGTGGCAGGATAACAGCCCCCAAGACAGCTGTGTCCTAATCCCCAGAACCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR CCA 90 bp | TTTCCTTTATGCTGGGGCTTCCACCTGTGCATACCACAGGCTGTCGTTTTCCTTTCTGCAGACCTTTGCTaGGTCACAAGGCCGCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FPLCWGFHLCIPQAVVFLSADLC*VTRPPV Trigger: AACCGGCGGCCTTGTGACCCAGCAAAGGTCTGCAGA...AAGGAAAACGACAGCCTGTGGTATGCACAGGTGGAAGCCCCAGCATAAAGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643595.1 |
||
| CDS-3UTR CCA 90 bp | CAGGTTCTGGGGATTAGGACACAGCTGTCTTGGGGGCTGTTATCCTGCCACAGCCTTCCTAATAGGCCATaGACCACTACTGGTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QVLGIRTQLSWGLLSCHSLPNRP*TTTGLC Trigger: ACACAGACCAGTAGTGGTCCATGGCCTATTAGGAAG...GCTGTGGCAGGATAACAGCCCCCAAGACAGCTGTGTCCTAATCCCCAGAACCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR CCA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCGGTCCCCAACCTTTTTaGCACCAGAGACCGGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SAGSFQRLRERMRFLAFSGPQPF*HQRPVS Trigger: CGAAACCGGTCTCTGGTGCCAAAAAGGTTGGGGACC...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR TCA 90 bp | CAGGTTCTGGGGATTAGGACACAGCTGTCTTGGGGGCTGTTATCCTGCCACAGCGCTGAACAAAAGGAATaGGGCTTTGCAACTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVLGIRTQLSWGLLSCHSAEQKE*GFATAS Trigger: AGAAGCAGTTGCAAAGCCTCATTCCTTTTGTTCAGC...GCTGTGGCAGGATAACAGCCCCCAAGACAGCTGTGTCCTAATCCCCAGAACCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR TCA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCGTTCCTTCCAGAGGCTaGGGGAGAGAATGCGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SAGSFQRLRERMRFLAFSVPSRG*GRECVF Trigger: GAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAAC...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR GCA 90 bp | ATGCTGGGGCTTCCACCTGTGCATACCACAGGCTGTCGTTTTCCTTGTCCAAGCCTTTGCAACTGCTTCTaGCCAAACACAGAGCCGATA | + |
|
Preference number: 4 (lower is better) Translates to: MLGLPPVHTTGCRFPCPSLCNCF*PNTEPI Trigger: TATCGGCTCTGTGTTTGGGCAGAAGCAGTTGCAAAG...GCTTGGACAAGGAAAACGACAGCCTGTGGTATGCACAGGTGGAAGCCCCAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643595.1 |
||
| CDS-3UTR GCA 90 bp | CAGGTTCTGGGGATTAGGACACAGCTGTCTTGGGGGCTGTTATCCTGCCACAGCAAAGGAATGAGGCTTTaGAACTGCTTCTGCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QVLGIRTQLSWGLLSCHSKGMRL*NCFCPN Trigger: GTTTGGGCAGAAGCAGTTGCAAAGCCTCATTCCTTT...GCTGTGGCAGGATAACAGCCCCCAAGACAGCTGTGTCCTAATCCCCAGAACCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTATGCTGGGGCTTCCACCTGTGCATACCACAGGCTGTCGTTTTCCTTGCCTCATTCACGAGTCTaGAGACCTTTGCTGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLYAGASTCAYHRLSFSLPHSRV*RPLLGH Trigger: GTGACCCAGCAAAGGTCTGCAGACTCGTGAATGAGG...CAAGGAAAACGACAGCCTGTGGTATGCACAGGTGGAAGCCCCAGCATAAAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643595.1 |
||
| CDS-3UTR TCA 90 bp | CAGGTTCTGGGGATTAGGACACAGCTGTCTTGGGGGCTGTTATCCTGCCACAGCGGATGCCTGCTGAAATaGTACAGTATGCATGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QVLGIRTQLSWGLLSCHSGCLLK*YSMHVR Trigger: TCTTACATGCATACTGTATCATTTCAGCAGGCATCC...GCTGTGGCAGGATAACAGCCCCCAAGACAGCTGTGTCCTAATCCCCAGAACCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR TCA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCACTGCTTGCAATCCTTaGCTAGTGGTACCTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SAGSFQRLRERMRFLAFSTACNP*LVVPPS Trigger: GGAAGGAGGTACCACTAGTCAAGGATTGCAAGCAGT...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTATGCTGGGGCTTCCACCTGTGCATACCACAGGCTGTCGTTTTCCTTGGTCCAAGCTGATTGGTaGAACTTACACGGATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLYAGASTCAYHRLSFSLVQADW*NLHGCL Trigger: CAGGCATCCGTGTAAGTTGCACCAATCAGCTTGGAC...CAAGGAAAACGACAGCCTGTGGTATGCACAGGTGGAAGCCCCAGCATAAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643595.1 |
||
| CDS-3UTR GCA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCCGATATTTTCCTTTATaGTGGGGCTTCCACCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SAGSFQRLRERMRFLAFSRYFPL*WGFHLC Trigger: GCACAGGTGGAAGCCCCAGCATAAAGGAAAATATCG...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR GCA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCATGAGGCTTTGCAACTaGTTCTGCCCAAACACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SAGSFQRLRERMRFLAFSMRLCN*FCPNTE Trigger: CTCTGTGTTTGGGCAGAAGCAGTTGCAAAGCCTCAT...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTATGCTGGGGCTTCCACCTGTGCATACCACAGGCTGTCGTTTTCCTTGATGAGGCTTTGCAACTaGTTCTGCCCAAACACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLYAGASTCAYHRLSFSLMRLCN*FCPNTE Trigger: CTCTGTGTTTGGGCAGAAGCAGTTGCAAAGCCTCAT...CAAGGAAAACGACAGCCTGTGGTATGCACAGGTGGAAGCCCCAGCATAAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643595.1 |
||
| 3UTR CAA 72 bp | TGTCCGGAGTGTTGGAATCCCTGTTCTAGAGACTGCTaGCAATCCTTGACTAGTGGTACCTCCTTCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPECWNPCSRDC*QSLTSGTSFHL Trigger: GAGATGGAAGGAGGTACCACTAGTCAAGGATTGCAAGCAGTCTCTAGAACAGGGATTCCAACACTCCGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR TCA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCTACACGGATGCCTGCTaGAATGATACAGTATGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SAGSFQRLRERMRFLAFSYTDAC*NDTVCM Trigger: CATGCATACTGTATCATTTCAGCAGGCATCCGTGTA...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR TCA 90 bp | TTTCCTTTATGCTGGGGCTTCCACCTGTGCATACCACAGGCTGTCGTTTTCCTTTTTCCTTGTCCAAGCTaGTTGGTGCAACTTACACGG | + |
|
Preference number: 4 (lower is better) Translates to: FPLCWGFHLCIPQAVVFLFPCPS*LVQLTR Trigger: CCGTGTAAGTTGCACCAATCAGCTTGGACAAGGAAA...AAGGAAAACGACAGCCTGTGGTATGCACAGGTGGAAGCCCCAGCATAAAGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000643595.1 |
||
| CDS-3UTR TCA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCAAACTGTCTGTCTGTTaGACTCCTTCCAACTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SAGSFQRLRERMRFLAFSKLSVC*TPSNSM Trigger: CATGGAGTTGGAAGGAGTTCAACAGACAGACAGTTT...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR TCA 90 bp | TTTCCTTTATGCTGGGGCTTCCACCTGTGCATACCACAGGCTGTCGTTTTCCTTAAACTGTCTGTCTGTTaGACTCCTTCCAACTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: FPLCWGFHLCIPQAVVFLKLSVC*TPSNSM Trigger: CATGGAGTTGGAAGGAGTTCAACAGACAGACAGTTT...AAGGAAAACGACAGCCTGTGGTATGCACAGGTGGAAGCCCCAGCATAAAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643595.1 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTTATGCTGGGGCTTCCACCTGTGCATACCACAGGCTGTCGTTTTCCTTCTCCTTCCAACTCCATaGGTGCATTGTGAAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FPLCWGFHLCIPQAVVFLLLPTP*VHCEMK Trigger: TTTCATTTCACAATGCACGCATGGAGTTGGAAGGAG...AAGGAAAACGACAGCCTGTGGTATGCACAGGTGGAAGCCCCAGCATAAAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643595.1 |
||
| 3UTR CAA 72 bp | TGTTGGAATCCCTGTTCTAGAGACTGCTTGCAATCCTaGACTAGTGGTACCTCCTTCCATCTCCAAAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: CWNPCSRDCLQS*TSGTSFHLQNQ Trigger: CTGGTTTTGGAGATGGAAGGAGGTACCACTAGTCAAGGATTGCAAGCAGTCTCTAGAACAGGGATTCCAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR GCA 90 bp | CTGTCTGTTGAACTCCTTCCAACTCCATGCGTGCATTGTGAAATGAAACCTGAGAAAGGAATGAGGCTTTaGAACTGCTTCTGCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSVELLPTPCVHCEMKPEKGMRL*NCFCPN Trigger: GTTTGGGCAGAAGCAGTTGCAAAGCCTCATTCCTTT...CTCAGGTTTCATTTCACAATGCACGCATGGAGTTGGAAGGAGTTCAACAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643595.1 |
||
| CDS-3UTR CAA 90 bp | CAGGTTCTGGGGATTAGGACACAGCTGTCTTGGGGGCTGTTATCCTGCCACAGCCGAGTCTGCAGACCTTaGCTGGGTCACAAGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: QVLGIRTQLSWGLLSCHSRVCRP*LGHKAA Trigger: GGCGGCCTTGTGACCCAGCAAAGGTCTGCAGACTCG...GCTGTGGCAGGATAACAGCCCCCAAGACAGCTGTGTCCTAATCCCCAGAACCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR CAA 90 bp | CAGGTTCTGGGGATTAGGACACAGCTGTCTTGGGGGCTGTTATCCTGCCACAGCCGGTCCCCAACCTTTTaGGCACCAGAGACCGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QVLGIRTQLSWGLLSCHSRSPTF*APETGF Trigger: GAAACCGGTCTCTGGTGCCAAAAAGGTTGGGGACCG...GCTGTGGCAGGATAACAGCCCCCAAGACAGCTGTGTCCTAATCCCCAGAACCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR CAA 90 bp | CCCTTCTGCCACGTGAGGCAGCGTGGTCACAGGTTCTGGGGATTAGGACACAGCTCACAAGGCCGCCGGTaGATAAAGAAAAACTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PFCHVRQRGHRFWGLGHSSQGRR*IKKNCL Trigger: CAGACAGTTTTTCTTTATCAACCGGCGGCCTTGTGA...GCTGTGTCCTAATCCCCAGAACCTGTGACCACGCTGCCTCACGTGGCAGAAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTTATGCTGGGGCTTCCACCTGTGCATACCACAGGCTGTCGTTTTCCTTCGAGTCTGCAGACCTTaGCTGGGTCACAAGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: FPLCWGFHLCIPQAVVFLRVCRP*LGHKAA Trigger: GGCGGCCTTGTGACCCAGCAAAGGTCTGCAGACTCG...AAGGAAAACGACAGCCTGTGGTATGCACAGGTGGAAGCCCCAGCATAAAGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643595.1 |
||
| CDS-3UTR CAA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCGCTGAGATCATGCTATaGAACTCCAGCCTGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SAGSFQRLRERMRFLAFSAEIML*NSSLGN Trigger: GTTGCCCAGGCTGGAGTTCAATAGCATGATCTCAGC...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR CAA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCAGGCTGTCGTTTTCCTaGTCCAAGCTGATTGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SAGSFQRLRERMRFLAFSRLSFS*SKLIGA Trigger: TGCACCAATCAGCTTGGACAAGGAAAACGACAGCCT...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS-3UTR CAA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCAAAAGGAATGAGGCTTaGCAACTGCTTCTGCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SAGSFQRLRERMRFLAFSKRNEA*QLLLPK Trigger: TTTGGGCAGAAGCAGTTGCAAAGCCTCATTCCTTTT...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000265849.12 |
||
| CDS TCA 90 bp | CTTCCACCTGTGCATACCACAGGCTGTCGTTTTCCTTGTCCAAGCTaGTTGGTGCAACTTACACGGATGCCTGCTGAAATGATACAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LPPVHTTGCRFPCPS*LVQLTRMPAEMIQY Trigger: ATACTGTATCATTTCAGCAGGCATCCGTGTAAGTTGCACCAATCAGCTTGGACAAGGAAAACGACAGCCTGTGGTATGCACAGGTGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000265849.12 ENST00000382321.5 ENST00000406569.7 ENST00000441476.6 ENST00000642292.1 ENST00000642456.1 ENST00000644110.1 |
||
| CDS-3UTR CAA 90 bp | TTTCCTTTATGCTGGGGCTTCCACCTGTGCATACCACAGGCTGTCGTTTTCCTTAAAAGGAATGAGGCTTaGCAACTGCTTCTGCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FPLCWGFHLCIPQAVVFLKRNEA*QLLLPK Trigger: TTTGGGCAGAAGCAGTTGCAAAGCCTCATTCCTTTT...AAGGAAAACGACAGCCTGTGGTATGCACAGGTGGAAGCCCCAGCATAAAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000643595.1 |
||
| CDS TCA 90 bp | CTTGTCCAAGCTGATTGGTGCAACTTACACGGATGCCTGCTGAAATaGTACAGTATGCATGTAAGACCTGGACCATTTTGGCATACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LVQADWCNLHGCLLK*YSMHVRPGPFWHTP Trigger: AGGAGTATGCCAAAATGGTCCAGGTCTTACATGCATACTGTATCATTTCAGCAGGCATCCGTGTAAGTTGCACCAATCAGCTTGGACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000265849.12 ENST00000382321.5 ENST00000406569.7 ENST00000441476.6 ENST00000642292.1 ENST00000642456.1 ENST00000644110.1 |
||
| CDS CCA 90 bp | CACCTGTGCATACCACAGGCTGTCGTTTTCCTTGTCCAAGCTGATTaGTGCAACTTACACGGATGCCTGCTTCTTAATATTCCTTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: HLCIPQAVVFLVQAD*CNLHGCLLLNIPLK Trigger: TTTCAAAGGAATATTAAGAAGCAGGCATCCGTGTAAGTTGCACCAATCAGCTTGGACAAGGAAAACGACAGCCTGTGGTATGCACAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643595.1 |
||
| CDS-3UTR CAA 90 bp | AGTGCTGGTTCCTTCCAGAGGCTGAGGGAGAGAATGCGTTTTCTTGCCTTTTCCGACGATTCAAGTGCATaGCATTTATTGTGCACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SAGSFQRLRERMRFLAFSDDSSA*HLLCTL Trigger: TAAAGTGCACAATAAATGCAATGCACTTGAATCGTC...GGAAAAGGCAAGAAAACGCATTCTCTCCCTCAGCCTCTGGAAGGAACCAGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265849.12 |
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| CDS GCA 90 bp | CTGTGCATACCACAGGCTGTCGTTTTCCTTGTCCAAGCTGATTGGTaGAACTTACACGGATGCCTGCTTCTTAATATTCCTTTGAAATTC | + |
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Preference number: 5 (lower is better) Translates to: LCIPQAVVFLVQADW*NLHGCLLLNIPLKF Trigger: GAATTTCAAAGGAATATTAAGAAGCAGGCATCCGTGTAAGTTGCACCAATCAGCTTGGACAAGGAAAACGACAGCCTGTGGTATGCACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643595.1 |
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| CDS CAA 72 bp | GCTTCCACCTGTGCATACCACAGGCTGTCGTTTTCCTaGTCCAAGCTGATTGGTGCAACTTACACGGATGCC | + |
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Preference number: 6 (lower is better) Translates to: ASTCAYHRLSFS*SKLIGATYTDA Trigger: GGCATCCGTGTAAGTTGCACCAATCAGCTTGGACAAGGAAAACGACAGCCTGTGGTATGCACAGGTGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000265849.12 ENST00000382321.5 ENST00000406569.7 ENST00000441476.6 ENST00000642292.1 ENST00000642456.1 ENST00000643595.1 ENST00000644110.1 |
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| CDS CAA 90 bp | TATGCTGGGGCTTCCACCTGTGCATACCACAGGCTGTCGTTTTCCTaGTCCAAGCTGATTGGTGCAACTTACACGGATGCCTGCTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: YAGASTCAYHRLSFS*SKLIGATYTDACFL Trigger: TAAGAAGCAGGCATCCGTGTAAGTTGCACCAATCAGCTTGGACAAGGAAAACGACAGCCTGTGGTATGCACAGGTGGAAGCCCCAGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643595.1 |
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| CDS TCA 72 bp | GTGCATACCACAGGCTGTCGTTTTCCTTGTCCAAGCTaGTTGGTGCAACTTACACGGATGCCTGCTGAAATG | + |
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Preference number: 6 (lower is better) Translates to: VHTTGCRFPCPS*LVQLTRMPAEM Trigger: CATTTCAGCAGGCATCCGTGTAAGTTGCACCAATCAGCTTGGACAAGGAAAACGACAGCCTGTGGTATGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000265849.12 ENST00000382321.5 ENST00000406569.7 ENST00000441476.6 ENST00000642292.1 ENST00000642456.1 ENST00000644110.1 |
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| CDS GCA 72 bp | CCACAGGCTGTCGTTTTCCTTGTCCAAGCTGATTGGTaGAACTTACACGGATGCCTGCTTCTTAATATTCCT | + |
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Preference number: 6 (lower is better) Translates to: PQAVVFLVQADW*NLHGCLLLNIP Trigger: AGGAATATTAAGAAGCAGGCATCCGTGTAAGTTGCACCAATCAGCTTGGACAAGGAAAACGACAGCCTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643595.1 |
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| CDS TCA 72 bp | GCTGATTGGTGCAACTTACACGGATGCCTGCTGAAATaGTACAGTATGCATGTAAGACCTGGACCATTTTGG | + |
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Preference number: 6 (lower is better) Translates to: ADWCNLHGCLLK*YSMHVRPGPFW Trigger: CCAAAATGGTCCAGGTCTTACATGCATACTGTATCATTTCAGCAGGCATCCGTGTAAGTTGCACCAATCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000265849.12 ENST00000382321.5 ENST00000406569.7 ENST00000441476.6 ENST00000642292.1 ENST00000642456.1 ENST00000644110.1 |
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