RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PMPCB (Homo sapiens)

Ensembl gene IDs: ENSG00000105819

Ensembl transcript IDs: ENST00000249269.9, ENST00000428154.5, ENST00000443722.5, ENST00000444457.5, ENST00000453466.1, ENST00000456433.5, ENST00000469560.1, ENST00000498530.5

Found 494 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTTTCTTAGGGGGACTTGTTTCCATGTTGGAGGGAGGTGGGCCCTaGTATTTGTCCAGTCTGCTTTCTGTGAGGAGAGGTGACCCTGTG +
Preference number: 1 (lower is better)
Translates to: SFLGGLVSMLEGGGP*YLSSLLSVRRGDPV
Trigger: CACAGGGTCACCTCTCCTCACAGAAAGCAGACTGGACAAATATCAGGGCCCACCTCCCTCCAACATGGAAACAAGTCCCCCTAAGAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR GCA 90 bp CATTCCTCCCCCAAAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTaGAACCATGAGACAGATTGTATCTGGATGTGCCCAACCAACAGC +
Preference number: 1 (lower is better)
Translates to: HSSPKRAIPVANQRV*NHETDCIWMCPTNS
Trigger: GCTGTTGGTTGGGCACATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTTTGGGGGAGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
3UTR TCA 90 bp GACCCTGTGAAGGCAAGAGTGACTGGCAGTAGTGCTATGTGGGTATaGCTCCTTTGCCTCTTTTATGGAAATGGGAAGGCTCCTTCCTCT +
Preference number: 1 (lower is better)
Translates to: DPVKARVTGSSAMWV*LLCLFYGNGKAPSS
Trigger: AGAGGAAGGAGCCTTCCCATTTCCATAAAAGAGGCAAAGGAGTCATACCCACATAGCACTACTGCCAGTCACTCTTGCCTTCACAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR TCA 90 bp CCCCAAAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATaGGACAGATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAG +
Preference number: 1 (lower is better)
Translates to: PQKSDPSCQSACLQP*DRLYLDVPNQQLQQ
Trigger: CTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
3UTR GCA 90 bp GTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTaGGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCCT +
Preference number: 1 (lower is better)
Translates to: VSGCAQPTASTAIAR*AKGILSSLTRISLP
Trigger: AGGAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR GCA 90 bp GCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGATGTaGCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGG +
Preference number: 1 (lower is better)
Translates to: ANQRVCNHETDCIWM*PTNSFNSYCKVRQR
Trigger: CCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
3UTR CCA 90 bp CCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTaGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGC +
Preference number: 1 (lower is better)
Translates to: PVANQRVCNHETDCI*MCPTNSFNSYCKVR
Trigger: GCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
3UTR GCA 90 bp ACAGATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTaGAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTC +
Preference number: 1 (lower is better)
Translates to: TDCIWMCPTNSFNSY*KVRQRHLVIPHTNL
Trigger: GAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR GCA 90 bp TGTGACGAAGAGAACACCACACTACAACACAATCTAATCTCAGCTTaGCTCTCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCT +
Preference number: 1 (lower is better)
Translates to: CDEENTTLQHNLISA*LSSTGTLGTWLNFA
Trigger: AGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGAGAGGCAAGCTGAGATTAGATTGTGTTGTAGTGTGGTGTTCTCTTCGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR TCA 90 bp GTCCAACTGTGCATGTTGAGAGCCCAGAGTCTTCCGAAGCTACTCTaGGTCCACTTTCTAAACATGTTACTCTTGTTTCAGGAACATTCA +
Preference number: 1 (lower is better)
Translates to: VQLCMLRAQSLPKLL*VHFLNMLLLFQEHS
Trigger: TGAATGTTCCTGAAACAAGAGTAACATGTTTAGAAAGTGGACTCAGAGTAGCTTCGGAAGACTCTGGGCTCTCAACATGCACAGTTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR GCA 90 bp ATCAAGCTGCAACAACATGTTTGTTTTCAGAAGATTTCTGGCTCGTaGAACCTCACTTTCTGTGACACTTGTACAGAGTCGCATCCATTC +
Preference number: 1 (lower is better)
Translates to: IKLQQHVCFQKISGS*NLTFCDTCTESHPF
Trigger: GAATGGATGCGACTCTGTACAAGTGTCACAGAAAGTGAGGTTGCACGAGCCAGAAATCTTCTGAAAACAAACATGTTGTTGCAGCTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
3UTR CCA 90 bp AATCTAATCTCAGCTTGCCTCTCCAGCACTGGTACCTTGGGCACTTaGCTTAATTTTGCTAGGTTTGTTTCCTTCAGTGTAAAACAAGAA +
Preference number: 1 (lower is better)
Translates to: NLISACLSSTGTLGT*LNFARFVSFSVKQE
Trigger: TTCTTGTTTTACACTGAAGGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGAGAGGCAAGCTGAGATTAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR TCA 90 bp AGAGCTGGTATTTCTCCTTTGTGTGTGCATAAAGAGTCACCGAAATaGAACTTTGCTAAGTCAAGCAATTCATCATGGGAAACACCTCCA +
Preference number: 1 (lower is better)
Translates to: RAGISPLCVHKESPK*NFAKSSNSSWETPP
Trigger: TGGAGGTGTTTCCCATGATGAATTGCTTGACTTAGCAAAGTTTCATTTCGGTGACTCTTTATGCACACACAAAGGAGAAATACCAGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR TCA 90 bp ATGCTTTGGCATAGTATACAGTCTGCTCTCTGGAGGTATAGGCATTaGGATGAGCACCCATATTTTCAATCTCAAGTTCCAGATCTAACT +
Preference number: 1 (lower is better)
Translates to: MLWHSIQSALWRYRH*DEHPYFQSQVPDLT
Trigger: AGTTAGATCTGGAACTTGAGATTGAAAATATGGGTGCTCATCTCAATGCCTATACCTCCAGAGAGCAGACTGTATACTATGCCAAAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR TCA 90 bp TGTTTGTTTTCAGAAGATTTCTGGCTCGTGCAACCTCACTTTCTGTaGCACTTGTACAGAGTCGCATCCATTCTTTTTGAACAACATGTA +
Preference number: 1 (lower is better)
Translates to: CLFSEDFWLVQPHFL*HLYRVASILFEQHV
Trigger: TACATGTTGTTCAAAAAGAATGGATGCGACTCTGTACAAGTGTCACAGAAAGTGAGGTTGCACGAGCCAGAAATCTTCTGAAAACAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
3UTR CCA 90 bp AATGGGACCATTCTTTTTGAACAACATGTAGCATGTCTGCAACAGTaGATGATTCACAAACCATATACAGTCCCCATAATCCTGTATCTG +
Preference number: 1 (lower is better)
Translates to: NGTILFEQHVACLQQ*MIHKPYTVPIILYL
Trigger: CAGATACAGGATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACATGTTGTTCAAAAAGAATGGTCCCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443722.5
3UTR CCA 90 bp TTGTCTCAGCATTCACAGCATCAATTCTTGCTTCAAGCTCAGGGATaGGAATCCTTCTATTATAGCATAACATTTGCCTACCAATATCTT +
Preference number: 1 (lower is better)
Translates to: LSQHSQHQFLLQAQG*ESFYYSITFAYQYL
Trigger: AAGATATTGGTAGGCAAATGTTATGCTATAATAGAAGGATTCCCATCCCTGAGCTTGAAGCAAGAATTGATGCTGTGAATGCTGAGACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
3UTR TCA 90 bp TCTGACACACATCTTAGATGTTTTCTGAAATATACAAGGTTTAGTTaGAGAACCACAATAGCAGTTATTGGAAGTGTTCAGCATCGGCTC +
Preference number: 1 (lower is better)
Translates to: SDTHLRCFLKYTRFS*RTTIAVIGSVQHRL
Trigger: GAGCCGATGCTGAACACTTCCAATAACTGCTATTGTGGTTCTTCAACTAAACCTTGTATATTTCAGAAAACATCTAAGATGTGTGTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR CCA 90 bp CTTTCTAAACATGTTACTCTTGTTTCAGGAACATTCAGAACAACTTaGGTAGCAGCCTGTGTACTTCTTAATCTGTTCTCTCCAAAATAT +
Preference number: 1 (lower is better)
Translates to: LSKHVTLVSGTFRTT*VAACVLLNLFSPKY
Trigger: ATATTTTGGAGAGAACAGATTAAGAAGTACACAGGCTGCTACCCAAGTTGTTCTGAATGTTCCTGAAACAAGAGTAACATGTTTAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR TCA 90 bp GTTCTTTTAATAAAGGTAAGTAACAAGGCAGGGTTTCAGAACACCTaGAAGACACTTCTTTATAAAGGAGTTTATTCTCCTGCACCTTTA +
Preference number: 1 (lower is better)
Translates to: VLLIKVSNKAGFQNT*KTLLYKGVYSPAPL
Trigger: TAAAGGTGCAGGAGAATAAACTCCTTTATAAAGAAGTGTCTTTCAGGTGTTCTGAAACCCTGCCTTGTTACTTACCTTTATTAAAAGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR-3UTR TCA 90 bp CAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCATCCAACTGTGCATGTTaGGAGCCCAGAGTCTTCCGA +
Preference number: 2 (lower is better)
Translates to: QQLQQLLQGAPKASCHPSSNCAC*EPRVFR
Trigger: TCGGAAGACTCTGGGCTCTCAACATGCACAGTTGGA...TGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR-3UTR TCA 90 bp CTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCACTGTGTAGGAAGTGTTaGAAGACTGAAAGCTATGGC +
Preference number: 2 (lower is better)
Translates to: LDVPNQQLQQLLQGAPKALCRKC*KTESYG
Trigger: GCCATAGCTTTCAGTCTTTCAACACTTCCTACACAG...TGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
3UTR-3UTR CCA 90 bp AGGAGAGGTGACCCTGTGAAGGCAAGAGTGACTGGCAGTAGTGCTATGTGGGTACCTTTGCCTCTTTTATaGAAATGGGAAGGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: RRGDPVKARVTGSSAMWVPLPLL*KWEGSF
Trigger: GAAGGAGCCTTCCCATTTCCATAAAAGAGGCAAAGG...TACCCACATAGCACTACTGCCAGTCACTCTTGCCTTCACAGGGTCACCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR-3UTR CCA 90 bp CCCAAAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATGCAGGGAGGCAGAGCTaGTATTTCTCCTTTGTGTGT +
Preference number: 2 (lower is better)
Translates to: PKRAIPVANQRVCNHETDAGRQS*YFSFVC
Trigger: ACACACAAAGGAGAAATACCAGCTCTGCCTCCCTGC...ATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CCA 90 bp TATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCCGCAGGGAGGCAGAGCTaGTATTTCTCCTTTGTGTGT +
Preference number: 2 (lower is better)
Translates to: YCKVRQRHLVIPHTNLTSAGRQS*YFSFVC
Trigger: ACACACAAAGGAGAAATACCAGCTCTGCCTCCCTGC...GGAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR CAA 90 bp GACAGATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATaGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCT +
Preference number: 2 (lower is better)
Translates to: DRLYLDVPNQQLQQL*QGAPKASCHPSHES
Trigger: AGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR TCA 90 bp GCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATCCTGTGGCAAAGATTGCCATaGCAAGTGAGCTGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: ACLQQWMIHKPYTVPIILWQRLP*QVSWAS
Trigger: GCTGGCCCAGCTCACTTGTCATGGCAATCTTTGCCA...CAGGATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
3UTR-3UTR CCA 90 bp CTGAAAGCTATGGCAAAGATTGCCATGACAAGTGAGCTGGGCCAGCTTGCTAGAGAGACAGATTGTATCTaGATGTGCCCAACCAACAGC +
Preference number: 2 (lower is better)
Translates to: LKAMAKIAMTSELGQLARETDCI*MCPTNS
Trigger: GCTGTTGGTTGGGCACATCCAGATACAATCTGTCTC...TCTAGCAAGCTGGCCCAGCTCACTTGTCATGGCAATCTTTGCCATAGCTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
3UTR-3UTR TCA 90 bp AGGAGAGGTGACCCTGTGAAGGCAAGAGTGACTGGCAGTAGTGCTATGTGGGTAAGTAGAGCCAAGAAATaGCAATCTTTGTTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: RRGDPVKARVTGSSAMWVSRAKK*QSLLCV
Trigger: CACACACAACAAAGATTGTCATTTCTTGGCTCTACT...TACCCACATAGCACTACTGCCAGTCACTCTTGCCTTCACAGGGTCACCTCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR-3UTR TCA 90 bp GGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCAAAGAGTCACCGAAATaGAACTTTGCTAAGTCAAGC +
Preference number: 2 (lower is better)
Translates to: GCAQPTASTAIARCAKGIKESPK*NFAKSS
Trigger: GCTTGACTTAGCAAAGTTTCATTTCGGTGACTCTTT...GATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR TCA 90 bp CAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACTTCCGAAGCTACTCTaGGTCCACTTTCTAAACATG +
Preference number: 2 (lower is better)
Translates to: QQLQQLLQGAPKASCHPSLPKLL*VHFLNM
Trigger: CATGTTTAGAAAGTGGACTCAGAGTAGCTTCGGAAG...TGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR-3UTR GCA 90 bp AAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCCTGTGAACCCTTGAAAGCCATATaGTCCAGAAAGTGTGCTGTT +
Preference number: 2 (lower is better)
Translates to: KVRQRHLVIPHTNLTSCEPLKAI*SRKCAV
Trigger: AACAGCACACTTTCTGGAGCATATGGCTTTCAAGGG...TTCACAGGAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR-3UTR TCA 90 bp CTCTCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCCAAAGAAGGACTGCATaGAACGATACAAGGTTGCAG +
Preference number: 2 (lower is better)
Translates to: LSSTGTLGTWLNFARFVSQRRTA*NDTRLQ
Trigger: CTGCAACCTTGTATCGTTTCATGCAGTCCTTCTTTG...GGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR-3UTR TCA 90 bp GTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAATGGAGGTATAGGCATTaGGATGAGCACCCATATTTT +
Preference number: 2 (lower is better)
Translates to: VSGCAQPTASTAIARCAKWRYRH*DEHPYF
Trigger: AAAATATGGGTGCTCATCTCAATGCCTATACCTCCA...TTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR GCA 90 bp AAAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTAGCTTCAACAGCTATTaGAAGGTGCGCCAAAGGCAT +
Preference number: 2 (lower is better)
Translates to: KRAIPVANQRVCNHETDCSFNSY*KVRQRH
Trigger: ATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCT...ACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
3UTR-3UTR CCA 90 bp GTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAAGCAAGCACTATTCTTaGCCCCTTATAATGTGTGGT +
Preference number: 2 (lower is better)
Translates to: VSGCAQPTASTAIARCAKSKHYS*PLIMCG
Trigger: ACCACACATTATAAGGGGCCAAGAATAGTGCTTGCT...TTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CCA 90 bp AAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTAAGTTCCAGATCTAACTaGGATCTCTTCTTGGTGCCC +
Preference number: 2 (lower is better)
Translates to: KERSQLPISVFATMRQIVSSRSN*DLFLVP
Trigger: GGGCACCAAGAAGAGATCCCAGTTAGATCTGGAACT...TACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR CAA 90 bp AGCTTGCTAGATAAATTCATTCCTCCCCCAAAAGAGCGATCCCAGTaGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGA +
Preference number: 2 (lower is better)
Translates to: SLLDKFIPPPKERSQ*PISVFATMRQIVSG
Trigger: TCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTTTGGGGGAGGAATGAATTTATCTAGCAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
3UTR-3UTR GCA 90 bp ATTAGACGTACTGTGGCTGAGGCTGTGGTAAAAGGATGTTCACGTAGGAGTATGGATTGTATCTGGATGTaGCCAACCAACAGCTTCAAC +
Preference number: 2 (lower is better)
Translates to: IRRTVAEAVVKGCSRRSMDCIWM*PTNSFN
Trigger: GTTGAAGCTGTTGGTTGGGCACATCCAGATACAATC...CATACTCCTACGTGAACATCCTTTTACCACAGCCTCAGCCACAGTACGTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR-3UTR CCA 90 bp ATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGAATTTCTACAGCTCTTaGCAAGTCTTTAGAGAATGC +
Preference number: 2 (lower is better)
Translates to: IWMCPTNSFNSYCKVRQRNFYSS*QVFREC
Trigger: GCATTCTCTAAAGACTTGCCAAGAGCTGTAGAAATT...CCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CCA 90 bp CCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCAATTTCTACAGCTCTTaGCAAGTCTTTAGAGAATGC +
Preference number: 2 (lower is better)
Translates to: PTASTAIARCAKGILSSLNFYSS*QVFREC
Trigger: GCATTCTCTAAAGACTTGCCAAGAGCTGTAGAAATT...GAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CCA 90 bp GAGACAGATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGTCAAGCAATTCATCATaGGAAACACCTCCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: ETDCIWMCPTNSFNSYCKSSNSS*ETPPAA
Trigger: TGCTGCTGGAGGTGTTTCCCATGATGAATTGCTTGA...CTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCTGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CCA 90 bp AAAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTTCAAGCAATTCATCATaGGAAACACCTCCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: KRAIPVANQRVCNHETDCSSNSS*ETPPAA
Trigger: TGCTGCTGGAGGTGTTTCCCATGATGAATTGCTTGA...ACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR CAA 90 bp CTACAACACAATCTAATCTCAGCTTGCCTCTCCAGCACTGGTACCTaGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCTTCAGTGTA +
Preference number: 2 (lower is better)
Translates to: LQHNLISACLSSTGT*GTWLNFARFVSFSV
Trigger: TACACTGAAGGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGAGAGGCAAGCTGAGATTAGATTGTGTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR-3UTR TCA 90 bp CCGCAGTTTCTAGTAGTAGTCAGGCTACTGGTAGTATTAGTCTGTGTTGTCACTCTCAAGAACAAGTGCTaGATGCAAGTAGAGCCAAGA +
Preference number: 2 (lower is better)
Translates to: PQFLVVVRLLVVLVCVVTLKNKC*MQVEPR
Trigger: TCTTGGCTCTACTTGCATTCAGCACTTGTTCTTGAG...AGTGACAACACAGACTAATACTACCAGTAGCCTGACTACTACTAGAAACTGCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR-3UTR TCA 90 bp TCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCTTCTTGTGGTTGTGTTTTTaGGTCCAAGAGTCCAACAGT +
Preference number: 2 (lower is better)
Translates to: SSTGTLGTWLNFARFVSFLWLCF*VQESNS
Trigger: ACTGTTGGACTCTTGGACTCAAAAACACAACCACAA...GAAGGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR-3UTR TCA 90 bp ATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGATGTGGAGGTATAGGCATTaGGATGAGCACCCATATTTT +
Preference number: 2 (lower is better)
Translates to: IPVANQRVCNHETDCIWMWRYRH*DEHPYF
Trigger: AAAATATGGGTGCTCATCTCAATGCCTATACCTCCA...CATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR TCA 90 bp TTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATAATATAATGATTCATTaGTGTCCAGGTTCGCGGGAA +
Preference number: 2 (lower is better)
Translates to: FNSYCKVRQRHLVIPHTNNIMIH*CPGSRE
Trigger: TTCCCGCGAACCTGGACATCAATGAATCATTATATT...ATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR-3UTR GCA 90 bp TATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCCTTGGTTTCAACTTCCTaGATCTCTCTAAGGATTACT +
Preference number: 2 (lower is better)
Translates to: YCKVRQRHLVIPHTNLTSLVSTS*ISLRIT
Trigger: AGTAATCCTTAGAGAGATGCAGGAAGTTGAAACCAA...GGAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR GCA 90 bp CCCAAAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTTTCTCCTTTGTGTGTaGATAAAGAGTCACCGAAAT +
Preference number: 2 (lower is better)
Translates to: PKRAIPVANQRVCNHETDFLLCV*IKSHRN
Trigger: ATTTCGGTGACTCTTTATGCACACACAAAGGAGAAA...ATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR GCA 90 bp CATGTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAACAGCTATTGCAAGGTaGGCCAAAGGCATCTTGTCA +
Preference number: 2 (lower is better)
Translates to: HVACLQQWMIHKPYTVPITAIAR*AKGILS
Trigger: TGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGT...TATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR GCA 90 bp TGTATCTGTGTAGGAAGTGTTGAAAGACTGAAAGCTATGGCAAAGATTGCCATGTCCAGAGTCCAACTGTaGATGTTGAGAGCCCAGAGT +
Preference number: 2 (lower is better)
Translates to: CICVGSVERLKAMAKIAMSRVQL*MLRAQS
Trigger: ACTCTGGGCTCTCAACATGCACAGTTGGACTCTGGA...CATGGCAATCTTTGCCATAGCTTTCAGTCTTTCAACACTTCCTACACAGATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR-3UTR CCA 90 bp TCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCTTCCATCCCAGATTGAAATaGGCACTTAGCGAATACTTG +
Preference number: 2 (lower is better)
Translates to: SSTGTLGTWLNFARFVSFHPRLK*ALSEYL
Trigger: CAAGTATTCGCTAAGTGCCCATTTCAATCTGGGATG...GAAGGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR-3UTR CCA 90 bp TCAATCTCAAGTTCCAGATCTAACTGGGATCTCTTCTTGGTGCCCTTGAAAGCCACATTCAGAACAACTTaGGTAGCAGCCTGTGTACTT +
Preference number: 2 (lower is better)
Translates to: SISSSRSNWDLFLVPLKATFRTT*VAACVL
Trigger: AAGTACACAGGCTGCTACCCAAGTTGTTCTGAATGT...GGCTTTCAAGGGCACCAAGAAGAGATCCCAGTTAGATCTGGAACTTGAGATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR-3UTR GCA 90 bp CCAAAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTAATTGTCCGTCCAAGTaGAGTATTTTGATAAGCTGT +
Preference number: 2 (lower is better)
Translates to: PKERSQLPISVFATMRQINCPSK*SILISC
Trigger: ACAGCTTATCAAAATACTGCACTTGGACGGACAATT...AATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CCA 90 bp CACTTAGCGAATACTTGTGGACCACAAGACTTGTCTGAGAACATGTTCAAAGACACAGACTTCACCCCTTaGACAACAGAAGAACAGAAG +
Preference number: 2 (lower is better)
Translates to: HLANTCGPQDLSENMFKDTDFTP*TTEEQK
Trigger: CTTCTGTTCTTCTGTTGTCCAAGGGGTGAAGTCTGT...GTCTTTGAACATGTTCTCAGACAAGTCTTGTGGTCCACAAGTATTCGCTAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR-3UTR CCA 90 bp AAGGAGTTTATTCTCCTGCACCTTTATCTCCACAAAATACAACAGGTATTAGCACATGTTGGAGGGAGGTaGGCCCTGATATTTGTCCAG +
Preference number: 2 (lower is better)
Translates to: KEFILLHLYLHKIQQVLAHVGGR*ALIFVQ
Trigger: CTGGACAAATATCAGGGCCCACCTCCCTCCAACATG...TGCTAATACCTGTTGTATTTTGTGGAGATAAAGGTGCAGGAGAATAAACTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR-3UTR CCA 90 bp CATGTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATATCAAGCAATTCATCATaGGAAACACCTCCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: HVACLQQWMIHKPYTVPISSNSS*ETPPAA
Trigger: TGCTGCTGGAGGTGTTTCCCATGATGAATTGCTTGA...TATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CCA 90 bp CAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATCCTGTATCTGTGTGAGACAGATTGTATCTaGATGTGCCCAACCAACAGC +
Preference number: 2 (lower is better)
Translates to: QQWMIHKPYTVPIILYLCETDCI*MCPTNS
Trigger: GCTGTTGGTTGGGCACATCCAGATACAATCTGTCTC...ACACAGATACAGGATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
3UTR CAA 90 bp GTATTTCTCCTTTGTGTGTGCATAAAGAGTCACCGAAATGAAACTTaGCTAAGTCAAGCAATTCATCATGGGAAACACCTCCAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: VFLLCVCIKSHRNET*LSQAIHHGKHLQQQ
Trigger: CTGCTGCTGGAGGTGTTTCCCATGATGAATTGCTTGACTTAGCAAAGTTTCATTTCGGTGACTCTTTATGCACACACAAAGGAGAAATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR GCA 90 bp ACATTTGCCTACCAATATCTTCACAAATTGGAGTTGAACCATCAAGCTGCAACAACAGCTATTGCAAGGTaGGCCAAAGGCATCTTGTCA +
Preference number: 2 (lower is better)
Translates to: TFAYQYLHKLELNHQAATTAIAR*AKGILS
Trigger: TGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGT...TGTTGCAGCTTGATGGTTCAACTCCAATTTGTGAAGATATTGGTAGGCAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CCA 90 bp CCTGCACCTTTATCTCCACAAAATACAACAGGTATTAGCACACTAGTCTCAGCTCACAATAGCAGTTATTaGAAGTGTTCAGCATCGGCT +
Preference number: 2 (lower is better)
Translates to: PAPLSPQNTTGISTLVSAHNSSY*KCSASA
Trigger: AGCCGATGCTGAACACTTCCAATAACTGCTATTGTG...AGCTGAGACTAGTGTGCTAATACCTGTTGTATTTTGTGGAGATAAAGGTGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR CAA 90 bp TACTCCACGCTCACGTTCAATCTCTGCTTCTCCCAATGTGCTGTTTaGTATTATATCAGCAAGAATTTCTACAGCTCTTGGCAAGTCTTT +
Preference number: 2 (lower is better)
Translates to: YSTLTFNLCFSQCAV*YYISKNFYSSWQVF
Trigger: AAAGACTTGCCAAGAGCTGTAGAAATTCTTGCTGATATAATACAAAACAGCACATTGGGAGAAGCAGAGATTGAACGTGAGCGTGGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR TCA 90 bp TGTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATTGGAGGTATAGGCATTaGGATGAGCACCCATATTTT +
Preference number: 2 (lower is better)
Translates to: CSMSATVDDSQTIYSPHNWRYRH*DEHPYF
Trigger: AAAATATGGGTGCTCATCTCAATGCCTATACCTCCA...ATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CCA 90 bp CATGTTTGTTTTCAGAAGATTTCTGGCTCGTGCAACCTCACTTTCTGTGACACTGCATGTCTGCAACAGTaGATGATTCACAAACCATAT +
Preference number: 2 (lower is better)
Translates to: HVCFQKISGSCNLTFCDTACLQQ*MIHKPY
Trigger: ATATGGTTTGTGAATCATCCACTGTTGCAGACATGC...AGTGTCACAGAAAGTGAGGTTGCACGAGCCAGAAATCTTCTGAAAACAAACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR GCA 90 bp TGCAACCTCACTTTCTGTGACACTTGTACAGAGTCGCATCCATTCTTTTTGAACAATTGTCCGTCCAAGTaGAGTATTTTGATAAGCTGT +
Preference number: 2 (lower is better)
Translates to: CNLTFCDTCTESHPFFLNNCPSK*SILISC
Trigger: ACAGCTTATCAAAATACTGCACTTGGACGGACAATT...GTTCAAAAAGAATGGATGCGACTCTGTACAAGTGTCACAGAAAGTGAGGTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CCA 90 bp CACTTAGCGAATACTTGTGGACCACAAGACTTGTCTGAGAACATGTTCAAAGACAAACTTTCTAGGCCCTaGCAGATAATGAAATCAGTA +
Preference number: 2 (lower is better)
Translates to: HLANTCGPQDLSENMFKDKLSRP*QIMKSV
Trigger: TACTGATTTCATTATCTGCCAGGGCCTAGAAAGTTT...GTCTTTGAACATGTTCTCAGACAAGTCTTGTGGTCCACAAGTATTCGCTAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR CAA 90 bp ATCTCTCATCTCTACAAGTTTATTTTCAAAATGACACATCCCAGATaGAAATGGGCACTTAGCGAATACTTGTGGACCACAAGACTTGTC +
Preference number: 2 (lower is better)
Translates to: ISHLYKFIFKMTHPR*KWALSEYLWTTRLV
Trigger: GACAAGTCTTGTGGTCCACAAGTATTCGCTAAGTGCCCATTTCAATCTGGGATGTGTCATTTTGAAAATAAACTTGTAGAGATGAGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR-3UTR TCA 90 bp ACATTTGCCTACCAATATCTTCACAAATTGGAGTTGAACCATCAAGCTGCAACAGAAGTGTTGAAAGACTaGAAGCTATGGCAAAGATTG +
Preference number: 2 (lower is better)
Translates to: TFAYQYLHKLELNHQAATEVLKD*KLWQRL
Trigger: CAATCTTTGCCATAGCTTTCAGTCTTTCAACACTTC...TGTTGCAGCTTGATGGTTCAACTCCAATTTGTGAAGATATTGGTAGGCAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR GCA 90 bp AACCATCAAGCTGCAACAACATGTTTGTTTTCAGAAGATTTCTGGCTCGTGCAATTGGTTTCAACTTCCTaGATCTCTCTAAGGATTACT +
Preference number: 2 (lower is better)
Translates to: NHQAATTCLFSEDFWLVQLVSTS*ISLRIT
Trigger: AGTAATCCTTAGAGAGATGCAGGAAGTTGAAACCAA...TTGCACGAGCCAGAAATCTTCTGAAAACAAACATGTTGTTGCAGCTTGATGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR TCA 90 bp TGTAAAACAAGAATGATTTCCAGGGTTTCTATCCAGCAAAAGTTTAACTGTGAGATGGGGTCAATATTATaGGGAAGAAATGAGCAACCT +
Preference number: 2 (lower is better)
Translates to: CKTRMISRVSIQQKFNCEMGSIL*GRNEQP
Trigger: AGGTTGCTCATTTCTTCCTCATAATATTGACCCCAT...CTCACAGTTAAACTTTTGCTGGATAGAAACCCTGGAAATCATTCTTGTTTTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR GCA 72 bp TGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTaGGCCAAAGGCATCTTGTCATCCCTCACACGAATC +
Preference number: 3 (lower is better)
Translates to: CAQPTASTAIAR*AKGILSSLTRI
Trigger: GATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR GCA 72 bp ATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTaGAAGGTGCGCCAAAGGCATCTTGTCATCCCTCAC +
Preference number: 3 (lower is better)
Translates to: IWMCPTNSFNSY*KVRQRHLVIPH
Trigger: GTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR TCA 72 bp AGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATaGGACAGATTGTATCTGGATGTGCCCAACCAACAG +
Preference number: 3 (lower is better)
Translates to: SDPSCQSACLQP*DRLYLDVPNQQ
Trigger: CTGTTGGTTGGGCACATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
3UTR GCA 72 bp GAGAACACCACACTACAACACAATCTAATCTCAGCTTaGCTCTCCAGCACTGGTACCTTGGGCACTTGGCTT +
Preference number: 3 (lower is better)
Translates to: ENTTLQHNLISA*LSSTGTLGTWL
Trigger: AAGCCAAGTGCCCAAGGTACCAGTGCTGGAGAGGCAAGCTGAGATTAGATTGTGTTGTAGTGTGGTGTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR GCA 72 bp CCCAAAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTaGAACCATGAGACAGATTGTATCTGGATGTGCCCA +
Preference number: 3 (lower is better)
Translates to: PKRAIPVANQRV*NHETDCIWMCP
Trigger: TGGGCACATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
3UTR CCA 72 bp TTTCTTAGGGGGACTTGTTTCCATGTTGGAGGGAGGTaGGCCCTGATATTTGTCCAGTCTGCTTTCTGTGAG +
Preference number: 3 (lower is better)
Translates to: FLRGTCFHVGGR*ALIFVQSAFCE
Trigger: CTCACAGAAAGCAGACTGGACAAATATCAGGGCCCACCTCCCTCCAACATGGAAACAAGTCCCCCTAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR-3UTR CAA 90 bp GTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAACAGCAAGCACTATTCTaGGCCCCTTATAATGTGTGG +
Preference number: 3 (lower is better)
Translates to: VSGCAQPTASTAIARCAKQQALF*APYNVW
Trigger: CCACACATTATAAGGGGCCAAGAATAGTGCTTGCTG...TTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CAA 90 bp CTCTCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCGCACTTAGCGAATACTaGTGGACCACAAGACTTGTC +
Preference number: 3 (lower is better)
Translates to: LSSTGTLGTWLNFARFVSALSEY*WTTRLV
Trigger: GACAAGTCTTGTGGTCCACAAGTATTCGCTAAGTGC...GGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR-3UTR CAA 90 bp TATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCCTCCAAGTGCAGTATTTaGATAAGCTGTGGCATGAAG +
Preference number: 3 (lower is better)
Translates to: YCKVRQRHLVIPHTNLTSSKCSI*ISCGMK
Trigger: CTTCATGCCACAGCTTATCAAAATACTGCACTTGGA...GGAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CAA 90 bp AAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTAAACTGGGATCTCTTCTaGGTGCCCTTGAAAGCCATA +
Preference number: 3 (lower is better)
Translates to: KERSQLPISVFATMRQIVNWDLF*VPLKAI
Trigger: TATGGCTTTCAAGGGCACCAAGAAGAGATCCCAGTT...TACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR GCA 72 bp CGTGTTTGCAACCATGAGACAGATTGTATCTGGATGTaGCCAACCAACAGCTTCAACAGCTATTGCAAGGTG +
Preference number: 3 (lower is better)
Translates to: RVCNHETDCIWM*PTNSFNSYCKV
Trigger: CACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCTGTCTCATGGTTGCAAACACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
3UTR CCA 72 bp TCAGCTTGCCTCTCCAGCACTGGTACCTTGGGCACTTaGCTTAATTTTGCTAGGTTTGTTTCCTTCAGTGTA +
Preference number: 3 (lower is better)
Translates to: SACLSSTGTLGT*LNFARFVSFSV
Trigger: TACACTGAAGGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGAGAGGCAAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR-3UTR CAA 90 bp TCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCTTCATGACACATCCCAGATaGAAATGGGCACTTAGCGAA +
Preference number: 3 (lower is better)
Translates to: SSTGTLGTWLNFARFVSFMTHPR*KWALSE
Trigger: TTCGCTAAGTGCCCATTTCAATCTGGGATGTGTCAT...GAAGGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR-3UTR CAA 90 bp GTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCCTGTGAATTTTCCAAGTGCAGTATTTaGATAAGCTGTGGCATGAAG +
Preference number: 3 (lower is better)
Translates to: VRQRHLVIPHTNLTSCEFSKCSI*ISCGMK
Trigger: CTTCATGCCACAGCTTATCAAAATACTGCACTTGGA...AAATTCACAGGAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CAA 90 bp CCAAAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGCTGGTATTTCTCCTTaGTGTGTGCATAAAGAGTCA +
Preference number: 3 (lower is better)
Translates to: PKERSQLPISVFATMRQIAGISP*CVHKES
Trigger: TGACTCTTTATGCACACACAAAGGAGAAATACCAGC...AATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CAA 90 bp CAGCAGCAAGCACTATTCTTGGCCCCTTATAATGTGTGGTTATATAATCCACTATCACTTCCTGTGAATTaGCAGGGAGGCAGAGCTGGT +
Preference number: 3 (lower is better)
Translates to: QQQALFLAPYNVWLYNPLSLPVN*QGGRAG
Trigger: ACCAGCTCTGCCTCCCTGCAAATTCACAGGAAGTGA...TAGTGGATTATATAACCACACATTATAAGGGGCCAAGAATAGTGCTTGCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CAA 90 bp CAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATCCTGTATCTGTGTTCACTTCCTGTGAATTaGCAGGGAGGCAGAGCTGGT +
Preference number: 3 (lower is better)
Translates to: QQWMIHKPYTVPIILYLCSLPVN*QGGRAG
Trigger: ACCAGCTCTGCCTCCCTGCAAATTCACAGGAAGTGA...ACACAGATACAGGATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR CCA 72 bp AATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTaGATGTGCCCAACCAACAGCTTCAACAGCTATTGC +
Preference number: 3 (lower is better)
Translates to: NQRVCNHETDCI*MCPTNSFNSYC
Trigger: GCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
3UTR-3UTR CAA 90 bp TCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCTTCTGTGGACCACAAGACTaGTCTGAGAACATGTTCAAA +
Preference number: 3 (lower is better)
Translates to: SSTGTLGTWLNFARFVSFCGPQD*SENMFK
Trigger: TTTGAACATGTTCTCAGACAAGTCTTGTGGTCCACA...GAAGGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR-3UTR CAA 90 bp CCCAAAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATACAACTTCTTGTAAATaGGTTTCAACTTCCTGCATC +
Preference number: 3 (lower is better)
Translates to: PKRAIPVANQRVCNHETDTTSCK*VSTSCI
Trigger: GATGCAGGAAGTTGAAACCAATTTACAAGAAGTTGT...ATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CAA 90 bp ATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCCTACAACTTCTTGTAAATaGGTTTCAACTTCCTGCATC +
Preference number: 3 (lower is better)
Translates to: IARCAKGILSSLTRISLPTTSCK*VSTSCI
Trigger: GATGCAGGAAGTTGAAACCAATTTACAAGAAGTTGT...AGGAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CAA 90 bp ACAGCTATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACACCGAAATGAAACTTaGCTAAGTCAAGCAATTCAT +
Preference number: 3 (lower is better)
Translates to: TAIARCAKGILSSLTRISHRNET*LSQAIH
Trigger: ATGAATTGCTTGACTTAGCAAAGTTTCATTTCGGTG...TGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CAA 90 bp GAGACAGATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGCTGGTATTTCTCCTTaGTGTGTGCATAAAGAGTCA +
Preference number: 3 (lower is better)
Translates to: ETDCIWMCPTNSFNSYCKAGISP*CVHKES
Trigger: TGACTCTTTATGCACACACAAAGGAGAAATACCAGC...CTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CAA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGTCACTTCCTGTGAATTaGCAGGGAGGCAGAGCTGGT +
Preference number: 3 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMSLPVN*QGGRAG
Trigger: ACCAGCTCTGCCTCCCTGCAAATTCACAGGAAGTGA...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443722.5
ENST00000453466.1
3UTR-3UTR CAA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGCAGCTTCAACAGCTATaGCAAGGTGCGCCAAAGGCA +
Preference number: 3 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMQLQQL*QGAPKA
Trigger: TGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTG...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443722.5
ENST00000453466.1
3UTR-3UTR CAA 90 bp TGTATCTGTGTAGGAAGTGTTGAAAGACTGAAAGCTATGGCAAAGATTGCCATGCTCTTCTTGGTGCCCTaGAAAGCCATATGCTCCAGA +
Preference number: 3 (lower is better)
Translates to: CICVGSVERLKAMAKIAMLFLVP*KAICSR
Trigger: TCTGGAGCATATGGCTTTCAAGGGCACCAAGAAGAG...CATGGCAATCTTTGCCATAGCTTTCAGTCTTTCAACACTTCCTACACAGATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR TCA 72 bp TGCATGTTGAGAGCCCAGAGTCTTCCGAAGCTACTCTaGGTCCACTTTCTAAACATGTTACTCTTGTTTCAG +
Preference number: 3 (lower is better)
Translates to: CMLRAQSLPKLL*VHFLNMLLLFQ
Trigger: CTGAAACAAGAGTAACATGTTTAGAAAGTGGACTCAGAGTAGCTTCGGAAGACTCTGGGCTCTCAACATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR CCA 72 bp AATGGAGACAGCAATAGCACTTTCCTCATAGGATCATaGAGAAGATTAACTGGTAAACAGGCCTGGCACATG +
Preference number: 3 (lower is better)
Translates to: NGDSNSTFLIGS*RRLTGKQAWHM
Trigger: CATGTGCCAGGCCTGTTTACCAGTTAATCTTCTCCATGATCCTATGAGGAAAGTGCTATTGCTGTCTCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR-3UTR CAA 90 bp CCGCAGTTTCTAGTAGTAGTCAGGCTACTGGTAGTATTAGTCTGTGTTGTCACTATTGTGGTTGTGTTTTaGAGTCCAAGAGTCCAACAG +
Preference number: 3 (lower is better)
Translates to: PQFLVVVRLLVVLVCVVTIVVVF*SPRVQQ
Trigger: CTGTTGGACTCTTGGACTCAAAAACACAACCACAAT...AGTGACAACACAGACTAATACTACCAGTAGCCTGACTACTACTAGAAACTGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR-3UTR CAA 90 bp AAAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTAAATATAATGATTCATaGATGTCCAGGTTCGCGGGA +
Preference number: 3 (lower is better)
Translates to: KRAIPVANQRVCNHETDCKYNDS*MSRFAG
Trigger: TCCCGCGAACCTGGACATCAATGAATCATTATATTT...ACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR-3UTR CAA 90 bp GTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATCAACATTCAGAACAACTaGGGTAGCAGCCTGTGTACT +
Preference number: 3 (lower is better)
Translates to: VACLQQWMIHKPYTVPIINIQNN*GSSLCT
Trigger: AGTACACAGGCTGCTACCCAAGTTGTTCTGAATGTT...GATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR TCA 72 bp ACAGTCCCCATAATCCTGTATCTGTGTAGGAAGTGTTaGAAGACTGAAAGCTATGGCAAAGATTGCCATGAC +
Preference number: 3 (lower is better)
Translates to: TVPIILYLCRKC*KTESYGKDCHD
Trigger: GTCATGGCAATCTTTGCCATAGCTTTCAGTCTTTCAACACTTCCTACACAGATACAGGATTATGGGGACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
3UTR TCA 72 bp TCAGAAGATTTCTGGCTCGTGCAACCTCACTTTCTGTaGCACTTGTACAGAGTCGCATCCATTCTTTTTGAA +
Preference number: 3 (lower is better)
Translates to: SEDFWLVQPHFL*HLYRVASILFE
Trigger: TTCAAAAAGAATGGATGCGACTCTGTACAAGTGTCACAGAAAGTGAGGTTGCACGAGCCAGAAATCTTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
3UTR GCA 72 bp CAACAACATGTTTGTTTTCAGAAGATTTCTGGCTCGTaGAACCTCACTTTCTGTGACACTTGTACAGAGTCG +
Preference number: 3 (lower is better)
Translates to: QQHVCFQKISGS*NLTFCDTCTES
Trigger: CGACTCTGTACAAGTGTCACAGAAAGTGAGGTTGCACGAGCCAGAAATCTTCTGAAAACAAACATGTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CAA 90 bp CAGTTATTGGAAGTGTTCAGCATCGGCTCCCAAGATTTTAGCAGATGTGACGAAGCACTTGGCTTAATTTaGCTAGGTTTGTTTCCTTCA +
Preference number: 3 (lower is better)
Translates to: QLLEVFSIGSQDFSRCDEALGLI*LGLFPS
Trigger: TGAAGGAAACAAACCTAGCAAAATTAAGCCAAGTGC...TTCGTCACATCTGCTAAAATCTTGGGAGCCGATGCTGAACACTTCCAATAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR TCA 72 bp CATAGTATACAGTCTGCTCTCTGGAGGTATAGGCATTaGGATGAGCACCCATATTTTCAATCTCAAGTTCCA +
Preference number: 3 (lower is better)
Translates to: HSIQSALWRYRH*DEHPYFQSQVP
Trigger: TGGAACTTGAGATTGAAAATATGGGTGCTCATCTCAATGCCTATACCTCCAGAGAGCAGACTGTATACTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR GCA 72 bp AAGAATTTCTACAGCTCTTGGCAAGTCTTTAGAGAATaGTTTGGCATAGTATACAGTCTGCTCTCTGGAGGT +
Preference number: 3 (lower is better)
Translates to: KNFYSSWQVFRE*FGIVYSLLSGG
Trigger: ACCTCCAGAGAGCAGACTGTATACTATGCCAAAGCATTCTCTAAAGACTTGCCAAGAGCTGTAGAAATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CAA 90 bp AACCATCAAGCTGCAACAACATGTTTGTTTTCAGAAGATTTCTGGCTCGTGCAAGCTGGTATTTCTCCTTaGTGTGTGCATAAAGAGTCA +
Preference number: 3 (lower is better)
Translates to: NHQAATTCLFSEDFWLVQAGISP*CVHKES
Trigger: TGACTCTTTATGCACACACAAAGGAGAAATACCAGC...TTGCACGAGCCAGAAATCTTCTGAAAACAAACATGTTGTTGCAGCTTGATGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CAA 90 bp AAGGAGTTTATTCTCCTGCACCTTTATCTCCACAAAATACAACAGGTATTAGCAGTGGGTATGACTCCTTaGCCTCTTTTATGGAAATGG +
Preference number: 3 (lower is better)
Translates to: KEFILLHLYLHKIQQVLAVGMTP*PLLWKW
Trigger: CCATTTCCATAAAAGAGGCAAAGGAGTCATACCCAC...TGCTAATACCTGTTGTATTTTGTGGAGATAAAGGTGCAGGAGAATAAACTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR CCA 72 bp CATTCACAGCATCAATTCTTGCTTCAAGCTCAGGGATaGGAATCCTTCTATTATAGCATAACATTTGCCTAC +
Preference number: 3 (lower is better)
Translates to: HSQHQFLLQAQG*ESFYYSITFAY
Trigger: GTAGGCAAATGTTATGCTATAATAGAAGGATTCCCATCCCTGAGCTTGAAGCAAGAATTGATGCTGTGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
3UTR-3UTR CAA 90 bp CTCCTTTGTGTGTGCATAAAGAGTCACCGAAATGAAACTTTGCTAAGTCAAGCAACAACTTCTTGTAAATaGGTTTCAACTTCCTGCATC +
Preference number: 3 (lower is better)
Translates to: LLCVCIKSHRNETLLSQATTSCK*VSTSCI
Trigger: GATGCAGGAAGTTGAAACCAATTTACAAGAAGTTGT...TGCTTGACTTAGCAAAGTTTCATTTCGGTGACTCTTTATGCACACACAAAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR GCA 72 bp TCAAAAACAACTTCTTGTAAATTGGTTTCAACTTCCTaGATCTCTCTAAGGATTACTCCACGCTCACGTTCA +
Preference number: 3 (lower is better)
Translates to: SKTTSCKLVSTS*ISLRITPRSRS
Trigger: TGAACGTGAGCGTGGAGTAATCCTTAGAGAGATGCAGGAAGTTGAAACCAATTTACAAGAAGTTGTTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR TCA 72 bp ATTTCTCCTTTGTGTGTGCATAAAGAGTCACCGAAATaGAACTTTGCTAAGTCAAGCAATTCATCATGGGAA +
Preference number: 3 (lower is better)
Translates to: ISPLCVHKESPK*NFAKSSNSSWE
Trigger: TTCCCATGATGAATTGCTTGACTTAGCAAAGTTTCATTTCGGTGACTCTTTATGCACACACAAAGGAGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR CCA 72 bp ATTCTTTTTGAACAACATGTAGCATGTCTGCAACAGTaGATGATTCACAAACCATATACAGTCCCCATAATC +
Preference number: 3 (lower is better)
Translates to: ILFEQHVACLQQ*MIHKPYTVPII
Trigger: GATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACATGTTGTTCAAAAAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
3UTR TCA 72 bp ATAAAGGTAAGTAACAAGGCAGGGTTTCAGAACACCTaGAAGACACTTCTTTATAAAGGAGTTTATTCTCCT +
Preference number: 3 (lower is better)
Translates to: IKVSNKAGFQNT*KTLLYKGVYSP
Trigger: AGGAGAATAAACTCCTTTATAAAGAAGTGTCTTTCAGGTGTTCTGAAACCCTGCCTTGTTACTTACCTTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp CTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCAGCGCCGACTCTCAGGTaGGCTGCGCCGGGTCTGGCG +
Preference number: 4 (lower is better)
Translates to: LDVPNQQLQQLLQGAPKAAPTLR*AAPGLA
Trigger: CGCCAGACCCGGCGCAGCGCACCTGAGAGTCGGCGC...TGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR GCA 90 bp CCAAAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGACTCTCAGGTGCGCTaGGCCGGGTCTGGCGAGATC +
Preference number: 4 (lower is better)
Translates to: PKERSQLPISVFATMRQIDSQVR*AGSGEI
Trigger: GATCTCGCCAGACCCGGCGCAGCGCACCTGAGAGTC...AATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR TCA 90 bp CTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATGGCAAAGATTGCCATaGCAAGTGAGCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LDVPNQQLQQLLQGAPKAWQRLP*QVSWAS
Trigger: GCTGGCCCAGCTCACTTGTCATGGCAATCTTTGCCA...TGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp AGGAGAGGTGACCCTGTGAAGGCAAGAGTGACTGGCAGTAGTGCTATGTGGGTAGAGGGAGGTGGGCCCTaGTATTTGTCCAGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: RRGDPVKARVTGSSAMWVEGGGP*YLSSLL
Trigger: AAGCAGACTGGACAAATATCAGGGCCCACCTCCCTC...TACCCACATAGCACTACTGCCAGTCACTCTTGCCTTCACAGGGTCACCTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp TCAATCTCAAGTTCCAGATCTAACTGGGATCTCTTCTTGGTGCCCTTGAAAGCCGGGTCGAGGAGGCCCTaGCCGACCCACTGTTCGGAT +
Preference number: 4 (lower is better)
Translates to: SISSSRSNWDLFLVPLKAGSRRP*PTHCSD
Trigger: ATCCGAACAGTGGGTCGGGCAGGGCCTCCTCGACCC...GGCTTTCAAGGGCACCAAGAAGAGATCCCAGTTAGATCTGGAACTTGAGATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR CCA 90 bp GAGACAGATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGAGGTCTCCTGGCGGGTaGCCACAAGCCAGTCACCCC +
Preference number: 4 (lower is better)
Translates to: ETDCIWMCPTNSFNSYCKRSPGG*PQASHP
Trigger: GGGGTGACTGGCTTGTGGCCACCCGCCAGGAGACCT...CTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR TCA 90 bp CTCTCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCTTAGAAGACTCTCGCTaGAACCCCAGAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: LSSTGTLGTWLNFARFVSLEDSR*NPRAAA
Trigger: GGCGGCGGCTCTGGGGTTTCAGCGAGAGTCTTCTAA...GGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR TCA 90 bp CGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGATTAGAAGACTCTCGCTaGAACCCCAGAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: RSQLPISVFATMRQIVSGLEDSR*NPRAAA
Trigger: GGCGGCGGCTCTGGGGTTTCAGCGAGAGTCTTCTAA...TCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp CCCAAAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGGCAAAGATTGCCATaGCAAGTGAGCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PKRAIPVANQRVCNHETDWQRLP*QVSWAS
Trigger: GCTGGCCCAGCTCACTTGTCATGGCAATCTTTGCCA...ATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CCA 90 bp GAGACAGATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGCACTGTTCGGATCTGTaGCGCCGACTCTCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: ETDCIWMCPTNSFNSYCKHCSDL*RRLSGA
Trigger: CGCACCTGAGAGTCGGCGCCACAGATCCGAACAGTG...CTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR CCA 90 bp GGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCACTGGGATCTCTTCTTaGTGCCTTGCCTTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: GCAQPTASTAIARCAKGITGISS*CLALKA
Trigger: GGCTTTCAAGGCAAGGCACCAAGAAGAGATCCCAGT...GATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443722.5
CDS-3UTR TCA 90 bp TGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCCTGTGAATTTGTGGCAAAGATTGCCATaGCAAGTGAGCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: CAKGILSSLTRISLPVNLWQRLP*QVSWAS
Trigger: GCTGGCCCAGCTCACTTGTCATGGCAATCTTTGCCA...CAAATTCACAGGAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR TCA 90 bp AGATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGTGGCAAAGATTGCCATaGCAAGTGAGCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RLYLDVPNQQLQQLLQGAWQRLP*QVSWAS
Trigger: GCTGGCCCAGCTCACTTGTCATGGCAATCTTTGCCA...CGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp TTGTCTCAGCATTCACAGCATCAATTCTTGCTTCAAGCTCAGGGATGGGAATCCCGCGGGAAGCCCAGCTaGGGACGAAGTTCAGTCTTA +
Preference number: 4 (lower is better)
Translates to: LSQHSQHQFLLQAQGWESRGKPS*GRSSVL
Trigger: TAAGACTGAACTTCGTCCTCAGCTGGGCTTCCCGCG...GGATTCCCATCCCTGAGCTTGAAGCAAGAATTGATGCTGTGAATGCTGAGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR GCA 90 bp AGGAGAGGTGACCCTGTGAAGGCAAGAGTGACTGGCAGTAGTGCTATGTGGGTAAGCTTCAACAGCTATTaGAAGGTGCGCCAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: RRGDPVKARVTGSSAMWVSFNSY*KVRQRH
Trigger: ATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCT...TACCCACATAGCACTACTGCCAGTCACTCTTGCCTTCACAGGGTCACCTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp GGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCAAGAGCGATCCCAGTTaGCAATCAGCGTGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: GCAQPTASTAIARCAKGIKSDPS*QSACLQ
Trigger: TTGCAAACACGCTGATTGGCAACTGGGATCGCTCTT...GATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CCA 90 bp CTCCCAATGTGCTGTTTTGTATTATATCAGCAAGAATTTCTACAGCTCTTGGCAGCGCTGCGCCGGGTCTaGCGAGATCTCGAGGACAGG +
Preference number: 4 (lower is better)
Translates to: LPMCCFVLYQQEFLQLLAALRRV*RDLEDR
Trigger: CCTGTCCTCGAGATCTCGCCAGACCCGGCGCAGCGC...TGCCAAGAGCTGTAGAAATTCTTGCTGATATAATACAAAACAGCACATTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR TCA 90 bp AGCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATCCTTTAGAAGACTCTCGCTaGAACCCCAGAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: SMSATVDDSQTIYSPHNPLEDSR*NPRAAA
Trigger: GGCGGCGGCTCTGGGGTTTCAGCGAGAGTCTTCTAA...AGGATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp CAAGTGAGCTGGGCCAGCTTGCTAGATAAATTCATTCCTCCCCCAAAAGAGCGACTTGGTGCCTTGCCTTaGAAGCCATATGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: QVSWASLLDKFIPPPKERLGALP*KPYAPE
Trigger: TTCTGGAGCATATGGCTTTCAAGGCAAGGCACCAAG...TCGCTCTTTTGGGGGAGGAATGAATTTATCTAGCAAGCTGGCCCAGCTCACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443722.5
CDS-3UTR GCA 90 bp GTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAATCCAGAGTCCAACTGTaGATGTTGAGAGCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: VSGCAQPTASTAIARCAKSRVQL*MLRAQS
Trigger: ACTCTGGGCTCTCAACATGCACAGTTGGACTCTGGA...TTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CCA 90 bp GTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGCAGGGAGGCAGAGCTaGTATTTCTCCTTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: VSGCAQPTASTAIARCAKAGRQS*YFSFVC
Trigger: ACACACAAAGGAGAAATACCAGCTCTGCCTCCCTGC...TTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CCA 90 bp ATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCCTGCAGGGAGGCAGAGCTaGTATTTCTCCTTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: IARCAKGILSSLTRISLPAGRQS*YFSFVC
Trigger: ACACACAAAGGAGAAATACCAGCTCTGCCTCCCTGC...AGGAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CCA 90 bp ATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGGAGACAGATTGTATCTaGATGTGCCCAACCAACAGC +
Preference number: 4 (lower is better)
Translates to: IWMCPTNSFNSYCKVRQRETDCI*MCPTNS
Trigger: GCTGTTGGTTGGGCACATCCAGATACAATCTGTCTC...CCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CCA 90 bp GTAGGAAGTGTTGAAAGACTGAAAGCTATGGCAAAGATTGCCATGACAAGTGAGGCACTCCTCAGTAGCTaGCGGGAGGAGCCGAAAACC +
Preference number: 4 (lower is better)
Translates to: VGSVERLKAMAKIAMTSEALLSS*REEPKT
Trigger: GGTTTTCGGCTCCTCCCGCCAGCTACTGAGGAGTGC...CTCACTTGTCATGGCAATCTTTGCCATAGCTTTCAGTCTTTCAACACTTCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR CAA 72 bp AGAGAACACCACACTACAACACAATCTAATCTCAGCTaGCCTCTCCAGCACTGGTACCTTGGGCACTTGGCT +
Preference number: 4 (lower is better)
Translates to: REHHTTTQSNLS*PLQHWYLGHLA
Trigger: AGCCAAGTGCCCAAGGTACCAGTGCTGGAGAGGCAAGCTGAGATTAGATTGTGTTGTAGTGTGGTGTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR CAA 72 bp TATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATaGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCA +
Preference number: 4 (lower is better)
Translates to: YLDVPNQQLQQL*QGAPKASCHPS
Trigger: TGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR TCA 90 bp ATAAATTCATTCCTCCCCCAAAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGTCCAACTGTGCATGTTaGGAGCCCAGAGTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: INSFLPQKSDPSCQSACLSNCAC*EPRVFR
Trigger: TCGGAAGACTCTGGGCTCTCAACATGCACAGTTGGA...CAAACACGCTGATTGGCAACTGGGATCGCTCTTTTGGGGGAGGAATGAATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp ATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGATGTCCAACTGTGCATGTTaGGAGCCCAGAGTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: IPVANQRVCNHETDCIWMSNCAC*EPRVFR
Trigger: TCGGAAGACTCTGGGCTCTCAACATGCACAGTTGGA...CATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp CAAGTGAGCTGGGCCAGCTTGCTAGATAAATTCATTCCTCCCCCAAAAGAGCGATCTTCTTGGTGCCCTTaGAAGCCATATGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: QVSWASLLDKFIPPPKERSSWCP*KPYAPE
Trigger: TTCTGGAGCATATGGCTTTCAAGGGCACCAAGAAGA...TCGCTCTTTTGGGGGAGGAATGAATTTATCTAGCAAGCTGGCCCAGCTCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000456433.5
CDS-3UTR TCA 90 bp ATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCCTCAACCTCACTTTCTGTaGCACTTGTACAGAGTCGCA +
Preference number: 4 (lower is better)
Translates to: IARCAKGILSSLTRISLPQPHFL*HLYRVA
Trigger: TGCGACTCTGTACAAGTGTCACAGAAAGTGAGGTTG...AGGAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR TCA 90 bp TGCAACCTCACTTTCTGTGACACTTGTACAGAGTCGCATCCATTCTTTTTGAACCATACAGACGCAGGCTaGGGAGTCAGGCTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: CNLTFCDTCTESHPFFLNHTDAG*GVRLSG
Trigger: TCCAGACAGCCTGACTCCTCAGCCTGCGTCTGTATG...GTTCAAAAAGAATGGATGCGACTCTGTACAAGTGTCACAGAAAGTGAGGTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR GCA 90 bp GCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGATGTGCCCAACCAGCTTCAACAGCTATTaGAAGGTGCGCCAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: ANQRVCNHETDCIWMCPTSFNSY*KVRQRH
Trigger: ATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCT...GGTTGGGCACATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR GCA 90 bp CAAGTGAGCTGGGCCAGCTTGCTAGATAAATTCATTCCTCCCCCAAAAGAGCGAAGCTTCAACAGCTATTaGAAGGTGCGCCAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: QVSWASLLDKFIPPPKERSFNSY*KVRQRH
Trigger: ATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCT...TCGCTCTTTTGGGGGAGGAATGAATTTATCTAGCAAGCTGGCCCAGCTCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR GCA 90 bp CAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCAAAGAGCGATCCCAGTTaGCAATCAGCGTGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: QQLQQLLQGAPKASCHPSKSDPS*QSACLQ
Trigger: TTGCAAACACGCTGATTGGCAACTGGGATCGCTCTT...TGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CCA 90 bp CCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCTCAAGCAATTCATCATaGGAAACACCTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PTASTAIARCAKGILSSLSSNSS*ETPPAA
Trigger: TGCTGCTGGAGGTGTTTCCCATGATGAATTGCTTGA...GAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CCA 90 bp CTATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCGAGACAGATTGTATCTaGATGTGCCCAACCAACAGC +
Preference number: 4 (lower is better)
Translates to: LLQGAPKASCHPSHESHFETDCI*MCPTNS
Trigger: GCTGTTGGTTGGGCACATCCAGATACAATCTGTCTC...GAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CCA 90 bp GTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGAGACAGATTGTATCTaGATGTGCCCAACCAACAGC +
Preference number: 4 (lower is better)
Translates to: VSGCAQPTASTAIARCAKETDCI*MCPTNS
Trigger: GCTGTTGGTTGGGCACATCCAGATACAATCTGTCTC...TTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CCA 90 bp AATTGTCCGTCCAAGTGCAGTATTTTGATAAGCTGTGGCATGAAGATAATCAAAAGGACAGGACCGGCCTaGAGGGAAGCTCACCCGTCC +
Preference number: 4 (lower is better)
Translates to: NCPSKCSILISCGMKIIKRTGPA*REAHPS
Trigger: GGACGGGTGAGCTTCCCTCCAGGCCGGTCCTGTCCT...TTTGATTATCTTCATGCCACAGCTTATCAAAATACTGCACTTGGACGGACAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR CAA 72 bp GCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCTaGTCATCCCTCACACGAATCTCACTTCCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: ASTAIARCAKGI*SSLTRISLPVN
Trigger: ATTCACAGGAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR TCA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGTTAGAAGACTCTCGCTaGAACCCCAGAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMLEDSR*NPRAAA
Trigger: GGCGGCGGCTCTGGGGTTTCAGCGAGAGTCTTCTAA...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR TCA 90 bp AGGAGAGGTGACCCTGTGAAGGCAAGAGTGACTGGCAGTAGTGCTATGTGGGTAAAAGAGTCACCGAAATaGAACTTTGCTAAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: RRGDPVKARVTGSSAMWVKESPK*NFAKSS
Trigger: GCTTGACTTAGCAAAGTTTCATTTCGGTGACTCTTT...TACCCACATAGCACTACTGCCAGTCACTCTTGCCTTCACAGGGTCACCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR TCA 90 bp CACTTAGCGAATACTTGTGGACCACAAGACTTGTCTGAGAACATGTTCAAAGACTGGCAAAGATTGCCATaGCAAGTGAGCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: HLANTCGPQDLSENMFKDWQRLP*QVSWAS
Trigger: GCTGGCCCAGCTCACTTGTCATGGCAATCTTTGCCA...GTCTTTGAACATGTTCTCAGACAAGTCTTGTGGTCCACAAGTATTCGCTAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp ATAAATTCATTCCTCCCCCAAAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGTCCAGAGTCCAACTGTaGATGTTGAGAGCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: INSFLPQKSDPSCQSACLSRVQL*MLRAQS
Trigger: ACTCTGGGCTCTCAACATGCACAGTTGGACTCTGGA...CAAACACGCTGATTGGCAACTGGGATCGCTCTTTTGGGGGAGGAATGAATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR GCA 90 bp AGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCACAGCTATTGCAAGGTaGGCCAAAGGCATCTTGTCA +
Preference number: 4 (lower is better)
Translates to: RAIPVANQRVCNHETDCITAIAR*AKGILS
Trigger: TGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGT...GATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR GCA 90 bp GCAACCATGAGACAGATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTACAGCTATTGCAAGGTaGGCCAAAGGCATCTTGTCA +
Preference number: 4 (lower is better)
Translates to: ATMRQIVSGCAQPTASTATAIAR*AKGILS
Trigger: TGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGT...AGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCTGTCTCATGGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR GCA 90 bp AGATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGACAGCTATTGCAAGGTaGGCCAAAGGCATCTTGTCA +
Preference number: 4 (lower is better)
Translates to: RLYLDVPNQQLQQLLQGATAIAR*AKGILS
Trigger: TGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGT...CGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR GCA 90 bp CGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGAAGCTTCAACAGCTATTaGAAGGTGCGCCAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: RSQLPISVFATMRQIVSGSFNSY*KVRQRH
Trigger: ATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCT...TCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR GCA 90 bp GCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGATGTGCCCAACCGCCAATCAGCGTGTTTaGAACCATGAGACAGATTGT +
Preference number: 4 (lower is better)
Translates to: ANQRVCNHETDCIWMCPTANQRV*NHETDC
Trigger: ACAATCTGTCTCATGGTTGCAAACACGCTGATTGGC...GGTTGGGCACATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR GCA 90 bp CCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGATGTGCAAGAGCGATCCCAGTTaGCAATCAGCGTGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: PVANQRVCNHETDCIWMCKSDPS*QSACLQ
Trigger: TTGCAAACACGCTGATTGGCAACTGGGATCGCTCTT...GCACATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CCA 90 bp TTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATAGTTCCAGATCTAACTaGGATCTCTTCTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: FNSYCKVRQRHLVIPHTNSSRSN*DLFLVP
Trigger: GGGCACCAAGAAGAGATCCCAGTTAGATCTGGAACT...ATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR CCA 90 bp AAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCCTGTGAATCAAGCAATTCATCATaGGAAACACCTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: KVRQRHLVIPHTNLTSCESSNSS*ETPPAA
Trigger: TGCTGCTGGAGGTGTTTCCCATGATGAATTGCTTGA...TTCACAGGAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CCA 90 bp CTCTCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCCCAGCACTGGTACCTTaGGCACTTGGCTTAATTTTG +
Preference number: 4 (lower is better)
Translates to: LSSTGTLGTWLNFARFVSPALVP*ALGLIL
Trigger: CAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGG...GGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR TCA 90 bp TGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCCTGTGAATTTGCTTCCGAAGCTACTCTaGGTCCACTTTCTAAACATG +
Preference number: 4 (lower is better)
Translates to: CAKGILSSLTRISLPVNLLPKLL*VHFLNM
Trigger: CATGTTTAGAAAGTGGACTCAGAGTAGCTTCGGAAG...CAAATTCACAGGAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR TCA 90 bp AGATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCTTCCGAAGCTACTCTaGGTCCACTTTCTAAACATG +
Preference number: 4 (lower is better)
Translates to: RLYLDVPNQQLQQLLQGALPKLL*VHFLNM
Trigger: CATGTTTAGAAAGTGGACTCAGAGTAGCTTCGGAAG...CGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp CCTGCACCTTTATCTCCACAAAATACAACAGGTATTAGCACACTAGTCTCAGCTTCCAACTGTGCATGTTaGGAGCCCAGAGTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: PAPLSPQNTTGISTLVSASNCAC*EPRVFR
Trigger: TCGGAAGACTCTGGGCTCTCAACATGCACAGTTGGA...AGCTGAGACTAGTGTGCTAATACCTGTTGTATTTTGTGGAGATAAAGGTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR TCA 90 bp TCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCTTCTCTTCTTGGTGCCCTTaGAAGCCATATGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SSTGTLGTWLNFARFVSFSSWCP*KPYAPE
Trigger: TTCTGGAGCATATGGCTTTCAAGGGCACCAAGAAGA...GAAGGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR TCA 90 bp CCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGATGTGCGCGTGTTTGCAACCATaGGACAGATTGTATCTGGAT +
Preference number: 4 (lower is better)
Translates to: PVANQRVCNHETDCIWMCACLQP*DRLYLD
Trigger: ATCCAGATACAATCTGTCTCATGGTTGCAAACACGC...GCACATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp ATAAATTCATTCCTCCCCCAAAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCTCACTTTCTGTaGCACTTGTACAGAGTCGCA +
Preference number: 4 (lower is better)
Translates to: INSFLPQKSDPSCQSACLQPHFL*HLYRVA
Trigger: TGCGACTCTGTACAAGTGTCACAGAAAGTGAGGTTG...CAAACACGCTGATTGGCAACTGGGATCGCTCTTTTGGGGGAGGAATGAATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR TCA 90 bp CACTTAGCGAATACTTGTGGACCACAAGACTTGTCTGAGAACATGTTCAAAGACTTCTGTGAGGAGAGGTaGCCCTGTGAAGGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: HLANTCGPQDLSENMFKDFCEER*PCEGKS
Trigger: ACTCTTGCCTTCACAGGGTCACCTCTCCTCACAGAA...GTCTTTGAACATGTTCTCAGACAAGTCTTGTGGTCCACAAGTATTCGCTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp CGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGACCCTTGAAAGCCATATaGTCCAGAAAGTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: RSQLPISVFATMRQIVSGPLKAI*SRKCAV
Trigger: AACAGCACACTTTCTGGAGCATATGGCTTTCAAGGG...TCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000456433.5
CDS-3UTR GCA 90 bp TCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCTTCACAGCTATTGCAAGGTaGGCCAAAGGCATCTTGTCA +
Preference number: 4 (lower is better)
Translates to: SSTGTLGTWLNFARFVSFTAIAR*AKGILS
Trigger: TGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGT...GAAGGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp AATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGATGTGCCCAACCAACACAGCTATTGCAAGGTaGGCCAAAGGCATCTTGTCA +
Preference number: 4 (lower is better)
Translates to: NQRVCNHETDCIWMCPTNTAIAR*AKGILS
Trigger: TGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGT...GTTGGTTGGGCACATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR GCA 90 bp GCAACCATGAGACAGATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTGATTGTATCTGGATGTaGCCAACCAACAGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: ATMRQIVSGCAQPTASTADCIWM*PTNSFN
Trigger: GTTGAAGCTGTTGGTTGGGCACATCCAGATACAATC...AGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCTGTCTCATGGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR GCA 90 bp CGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGAGCCAATCAGCGTGTTTaGAACCATGAGACAGATTGT +
Preference number: 4 (lower is better)
Translates to: RSQLPISVFATMRQIVSGANQRV*NHETDC
Trigger: ACAATCTGTCTCATGGTTGCAAACACGCTGATTGGC...TCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR GCA 90 bp CTGCATCTCTCTAAGGATTACTCCACGCTCACGTTCAATCTCTGCTTCTCCCAAGCCAATCAGCGTGTTTaGAACCATGAGACAGATTGT +
Preference number: 4 (lower is better)
Translates to: LHLSKDYSTLTFNLCFSQANQRV*NHETDC
Trigger: ACAATCTGTCTCATGGTTGCAAACACGCTGATTGGC...TTGGGAGAAGCAGAGATTGAACGTGAGCGTGGAGTAATCCTTAGAGAGATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp CCAAAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGCCAATCAGCGTGTTTaGAACCATGAGACAGATTGT +
Preference number: 4 (lower is better)
Translates to: PKERSQLPISVFATMRQIANQRV*NHETDC
Trigger: ACAATCTGTCTCATGGTTGCAAACACGCTGATTGGC...AATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR GCA 90 bp TGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCCTGTGAATTTGAAGATTTCTGGCTCGTaGAACCTCACTTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: CAKGILSSLTRISLPVNLKISGS*NLTFCD
Trigger: GTCACAGAAAGTGAGGTTGCACGAGCCAGAAATCTT...CAAATTCACAGGAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp TATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGCTGGCACATGTCAACTaGTATGTAGATGTTAACAGC +
Preference number: 4 (lower is better)
Translates to: YLDVPNQQLQQLLQGAPKLAHVN*YVDVNS
Trigger: GCTGTTAACATCTACATAGCAGTTGACATGTGCCAG...CTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR CCA 90 bp ACAGCTATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCAACATTCAGAACAACTTaGGTAGCAGCCTGTGTACTT +
Preference number: 4 (lower is better)
Translates to: TAIARCAKGILSSLTRISTFRTT*VAACVL
Trigger: AAGTACACAGGCTGCTACCCAAGTTGTTCTGAATGT...TGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CCA 90 bp TATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCCAGCAAGCACTATTCTTaGCCCCTTATAATGTGTGGT +
Preference number: 4 (lower is better)
Translates to: YCKVRQRHLVIPHTNLTSSKHYS*PLIMCG
Trigger: ACCACACATTATAAGGGGCCAAGAATAGTGCTTGCT...GGAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CCA 90 bp CTCTCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCTCAAGCAATTCATCATaGGAAACACCTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LSSTGTLGTWLNFARFVSSSNSS*ETPPAA
Trigger: TGCTGCTGGAGGTGTTTCCCATGATGAATTGCTTGA...GGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CCA 90 bp TTGCTAGATAAATTCATTCCTCCCCCAAAAGAGCGATCCCAGTTGCCAATCAGCGAGACAGATTGTATCTaGATGTGCCCAACCAACAGC +
Preference number: 4 (lower is better)
Translates to: LLDKFIPPPKERSQLPISETDCI*MCPTNS
Trigger: GCTGTTGGTTGGGCACATCCAGATACAATCTGTCTC...GCTGATTGGCAACTGGGATCGCTCTTTTGGGGGAGGAATGAATTTATCTAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
3UTR CAA 72 bp TTGTCATCCCTCACACGAATCTCACTTCCTGTGAATTaGCAGGGAGGCAGAGCTGGTATTTCTCCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: LSSLTRISLPVN*QGGRAGISPLC
Trigger: ACACAAAGGAGAAATACCAGCTCTGCCTCCCTGCAAATTCACAGGAAGTGAGATTCGTGTGAGGGATGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR TCA 90 bp ATAGATTTGATATTTTCAGTTGGTCCCAAAATTGTCCGTCCAAGTGCAGTATTTTTAGAAGACTCTCGCTaGAACCCCAGAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: IDLIFSVGPKIVRPSAVFLEDSR*NPRAAA
Trigger: GGCGGCGGCTCTGGGGTTTCAGCGAGAGTCTTCTAA...AAATACTGCACTTGGACGGACAATTTTGGGACCAACTGAAAATATCAAATCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR TCA 90 bp CTCCTTTGTGTGTGCATAAAGAGTCACCGAAATGAAACTTTGCTAAGTCAAGCATCCAACTGTGCATGTTaGGAGCCCAGAGTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: LLCVCIKSHRNETLLSQASNCAC*EPRVFR
Trigger: TCGGAAGACTCTGGGCTCTCAACATGCACAGTTGGA...TGCTTGACTTAGCAAAGTTTCATTTCGGTGACTCTTTATGCACACACAAAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR TCA 90 bp TGTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATTCCAACTGTGCATGTTaGGAGCCCAGAGTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: CSMSATVDDSQTIYSPHNSNCAC*EPRVFR
Trigger: TCGGAAGACTCTGGGCTCTCAACATGCACAGTTGGA...ATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp CTCTCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCTGGAGGTATAGGCATTaGGATGAGCACCCATATTTT +
Preference number: 4 (lower is better)
Translates to: LSSTGTLGTWLNFARFVSWRYRH*DEHPYF
Trigger: AAAATATGGGTGCTCATCTCAATGCCTATACCTCCA...GGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR TCA 90 bp GCAACCATGAGACAGATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTTGGAGGTATAGGCATTaGGATGAGCACCCATATTTT +
Preference number: 4 (lower is better)
Translates to: ATMRQIVSGCAQPTASTAWRYRH*DEHPYF
Trigger: AAAATATGGGTGCTCATCTCAATGCCTATACCTCCA...AGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCTGTCTCATGGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp CAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGATGTGCCTGGAGGTATAGGCATTaGGATGAGCACCCATATTTT +
Preference number: 4 (lower is better)
Translates to: QLPISVFATMRQIVSGCAWRYRH*DEHPYF
Trigger: AAAATATGGGTGCTCATCTCAATGCCTATACCTCCA...GGCACATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp CAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCAAAAGAGTCACCGAAATaGAACTTTGCTAAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: QQLQQLLQGAPKASCHPSKESPK*NFAKSS
Trigger: GCTTGACTTAGCAAAGTTTCATTTCGGTGACTCTTT...TGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR TCA 90 bp CTGAAAGCTATGGCAAAGATTGCCATGACAAGTGAGCTGGGCCAGCTTGCTAGAAAAGAGTCACCGAAATaGAACTTTGCTAAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: LKAMAKIAMTSELGQLARKESPK*NFAKSS
Trigger: GCTTGACTTAGCAAAGTTTCATTTCGGTGACTCTTT...TCTAGCAAGCTGGCCCAGCTCACTTGTCATGGCAATCTTTGCCATAGCTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR TCA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGATGGCAAAGATTGCCATaGCAAGTGAGCTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGWQRLP*QVSWAS
Trigger: GCTGGCCCAGCTCACTTGTCATGGCAATCTTTGCCA...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR TCA 90 bp CAAGTGAGCTGGGCCAGCTTGCTAGATAAATTCATTCCTCCCCCAAAAGAGCGAGAAGTGTTGAAAGACTaGAAGCTATGGCAAAGATTG +
Preference number: 4 (lower is better)
Translates to: QVSWASLLDKFIPPPKEREVLKD*KLWQRL
Trigger: CAATCTTTGCCATAGCTTTCAGTCTTTCAACACTTC...TCGCTCTTTTGGGGGAGGAATGAATTTATCTAGCAAGCTGGCCCAGCTCACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp AGTGTTGAAAGACTGAAAGCTATGGCAAAGATTGCCATGACAAGTGAGCTGGGCCTGTGTAGGAAGTGTTaGAAGACTGAAAGCTATGGC +
Preference number: 4 (lower is better)
Translates to: SVERLKAMAKIAMTSELGLCRKC*KTESYG
Trigger: GCCATAGCTTTCAGTCTTTCAACACTTCCTACACAG...GCCCAGCTCACTTGTCATGGCAATCTTTGCCATAGCTTTCAGTCTTTCAACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp GAGACAGATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGCTGTGTAGGAAGTGTTaGAAGACTGAAAGCTATGGC +
Preference number: 4 (lower is better)
Translates to: ETDCIWMCPTNSFNSYCKLCRKC*KTESYG
Trigger: GCCATAGCTTTCAGTCTTTCAACACTTCCTACACAG...CTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCTGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp CAGTTATTGGAAGTGTTCAGCATCGGCTCCCAAGATTTTAGCAGATGTGACGAACAACCTCACTTTCTGTaGCACTTGTACAGAGTCGCA +
Preference number: 4 (lower is better)
Translates to: QLLEVFSIGSQDFSRCDEQPHFL*HLYRVA
Trigger: TGCGACTCTGTACAAGTGTCACAGAAAGTGAGGTTG...TTCGTCACATCTGCTAAAATCTTGGGAGCCGATGCTGAACACTTCCAATAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR TCA 90 bp TCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCTTCCTCAAGAACAAGTGCTaGATGCAAGTAGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: SSTGTLGTWLNFARFVSFLKNKC*MQVEPR
Trigger: TCTTGGCTCTACTTGCATTCAGCACTTGTTCTTGAG...GAAGGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp CCTGCACCTTTATCTCCACAAAATACAACAGGTATTAGCACACTAGTCTCAGCTTCCAGAGTCCAACTGTaGATGTTGAGAGCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: PAPLSPQNTTGISTLVSASRVQL*MLRAQS
Trigger: ACTCTGGGCTCTCAACATGCACAGTTGGACTCTGGA...AGCTGAGACTAGTGTGCTAATACCTGTTGTATTTTGTGGAGATAAAGGTGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp GGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCCAAGTCTTTAGAGAATaGTTTGGCATAGTATACAGT +
Preference number: 4 (lower is better)
Translates to: GCAQPTASTAIARCAKGIQVFRE*FGIVYS
Trigger: ACTGTATACTATGCCAAAGCATTCTCTAAAGACTTG...GATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR GCA 90 bp TGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATTTGGTTTCAACTTCCTaGATCTCTCTAAGGATTACT +
Preference number: 4 (lower is better)
Translates to: WMCPTNSFNSYCKVRQRHLVSTS*ISLRIT
Trigger: AGTAATCCTTAGAGAGATGCAGGAAGTTGAAACCAA...ATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp CAGTTATTGGAAGTGTTCAGCATCGGCTCCCAAGATTTTAGCAGATGTGACGAAAAGAGCGATCCCAGTTaGCAATCAGCGTGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: QLLEVFSIGSQDFSRCDEKSDPS*QSACLQ
Trigger: TTGCAAACACGCTGATTGGCAACTGGGATCGCTCTT...TTCGTCACATCTGCTAAAATCTTGGGAGCCGATGCTGAACACTTCCAATAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp ATTAGACGTACTGTGGCTGAGGCTGTGGTAAAAGGATGTTCACGTAGGAGTATGAAGATTTCTGGCTCGTaGAACCTCACTTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: IRRTVAEAVVKGCSRRSMKISGS*NLTFCD
Trigger: GTCACAGAAAGTGAGGTTGCACGAGCCAGAAATCTT...CATACTCCTACGTGAACATCCTTTTACCACAGCCTCAGCCACAGTACGTCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR GCA 90 bp CCGCAGTTTCTAGTAGTAGTCAGGCTACTGGTAGTATTAGTCTGTGTTGTCACTCACAGCATCAATTCTTaGTTCAAGCTCAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: PQFLVVVRLLVVLVCVVTHSINS*FKLRDG
Trigger: CCCATCCCTGAGCTTGAAGCAAGAATTGATGCTGTG...AGTGACAACACAGACTAATACTACCAGTAGCCTGACTACTACTAGAAACTGCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp TATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCCATAACGTCTCCTCTGTaGCTCATTTTCCTCATCTAT +
Preference number: 4 (lower is better)
Translates to: YCKVRQRHLVIPHTNLTSITSPL*LIFLIY
Trigger: ATAGATGAGGAAAATGAGGCACAGAGGAGACGTTAT...GGAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR CCA 90 bp CAGAAGATTTCTGGCTCGTGCAACCTCACTTTCTGTGACACTTGTACAGAGTCGACATTCAGAACAACTTaGGTAGCAGCCTGTGTACTT +
Preference number: 4 (lower is better)
Translates to: QKISGSCNLTFCDTCTESTFRTT*VAACVL
Trigger: AAGTACACAGGCTGCTACCCAAGTTGTTCTGAATGT...CGACTCTGTACAAGTGTCACAGAAAGTGAGGTTGCACGAGCCAGAAATCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CCA 90 bp CACTTAGCGAATACTTGTGGACCACAAGACTTGTCTGAGAACATGTTCAAAGACGCAGGGAGGCAGAGCTaGTATTTCTCCTTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: HLANTCGPQDLSENMFKDAGRQS*YFSFVC
Trigger: ACACACAAAGGAGAAATACCAGCTCTGCCTCCCTGC...GTCTTTGAACATGTTCTCAGACAAGTCTTGTGGTCCACAAGTATTCGCTAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CCA 90 bp CATGTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAGCAGGGAGGCAGAGCTaGTATTTCTCCTTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: HVACLQQWMIHKPYTVPIAGRQS*YFSFVC
Trigger: ACACACAAAGGAGAAATACCAGCTCTGCCTCCCTGC...TATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CCA 90 bp TATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGTTTTCAGAAGATTTCTaGCTCGTGCAACCTCACTTT +
Preference number: 4 (lower is better)
Translates to: YLDVPNQQLQQLLQGAPKFSEDF*LVQPHF
Trigger: AAAGTGAGGTTGCACGAGCCAGAAATCTTCTGAAAA...CTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CCA 90 bp AAAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTAGTTCCAGATCTAACTaGGATCTCTTCTTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: KRAIPVANQRVCNHETDCSSRSN*DLFLVP
Trigger: AGGCACCAAGAAGAGATCCCAGTTAGATCTGGAACT...ACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443722.5
3UTR CAA 72 bp AATCTAATCTCAGCTTGCCTCTCCAGCACTGGTACCTaGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: NLISACLSSTGT*GTWLNFARFVS
Trigger: GGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGAGAGGCAAGCTGAGATTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
3UTR CAA 72 bp GATAAATTCATTCCTCCCCCAAAAGAGCGATCCCAGTaGCCAATCAGCGTGTTTGCAACCATGAGACAGATT +
Preference number: 4 (lower is better)
Translates to: DKFIPPPKERSQ*PISVFATMRQI
Trigger: AATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTTTGGGGGAGGAATGAATTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp CAGTTATTGGAAGTGTTCAGCATCGGCTCCCAAGATTTTAGCAGATGTGACGAACTTCCGAAGCTACTCTaGGTCCACTTTCTAAACATG +
Preference number: 4 (lower is better)
Translates to: QLLEVFSIGSQDFSRCDELPKLL*VHFLNM
Trigger: CATGTTTAGAAAGTGGACTCAGAGTAGCTTCGGAAG...TTCGTCACATCTGCTAAAATCTTGGGAGCCGATGCTGAACACTTCCAATAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR TCA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGATCCAACTGTGCATGTTaGGAGCCCAGAGTCTTCCGA +
Preference number: 4 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGSNCAC*EPRVFR
Trigger: TCGGAAGACTCTGGGCTCTCAACATGCACAGTTGGA...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR TCA 90 bp CCGCAGTTTCTAGTAGTAGTCAGGCTACTGGTAGTATTAGTCTGTGTTGTCACTGCGTGTTTGCAACCATaGGACAGATTGTATCTGGAT +
Preference number: 4 (lower is better)
Translates to: PQFLVVVRLLVVLVCVVTACLQP*DRLYLD
Trigger: ATCCAGATACAATCTGTCTCATGGTTGCAAACACGC...AGTGACAACACAGACTAATACTACCAGTAGCCTGACTACTACTAGAAACTGCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR TCA 90 bp CGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGAGAAGTGTTGAAAGACTaGAAGCTATGGCAAAGATTG +
Preference number: 4 (lower is better)
Translates to: RSQLPISVFATMRQIVSGEVLKD*KLWQRL
Trigger: CAATCTTTGCCATAGCTTTCAGTCTTTCAACACTTC...TCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR GCA 90 bp TGTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATTCCAGAGTCCAACTGTaGATGTTGAGAGCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: CSMSATVDDSQTIYSPHNSRVQL*MLRAQS
Trigger: ACTCTGGGCTCTCAACATGCACAGTTGGACTCTGGA...ATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR GCA 90 bp GCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATCCTGCCCTTGAAAGCCATATaGTCCAGAAAGTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: ACLQQWMIHKPYTVPIILPLKAI*SRKCAV
Trigger: AACAGCACACTTTCTGGAGCATATGGCTTTCAAGGG...CAGGATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000456433.5
CDS-3UTR GCA 90 bp ACAGCTATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCATTGGTTTCAACTTCCTaGATCTCTCTAAGGATTACT +
Preference number: 4 (lower is better)
Translates to: TAIARCAKGILSSLTRISLVSTS*ISLRIT
Trigger: AGTAATCCTTAGAGAGATGCAGGAAGTTGAAACCAA...TGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp CTGAAAGCTATGGCAAAGATTGCCATGACAAGTGAGCTGGGCCAGCTTGCTAGATTTCTCCTTTGTGTGTaGATAAAGAGTCACCGAAAT +
Preference number: 4 (lower is better)
Translates to: LKAMAKIAMTSELGQLARFLLCV*IKSHRN
Trigger: ATTTCGGTGACTCTTTATGCACACACAAAGGAGAAA...TCTAGCAAGCTGGCCCAGCTCACTTGTCATGGCAATCTTTGCCATAGCTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp TTTCAGTTGGTCCCAAAATTGTCCGTCCAAGTGCAGTATTTTGATAAGCTGTGGCACAGCATCAATTCTTaGTTCAAGCTCAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: FQLVPKLSVQVQYFDKLWHSINS*FKLRDG
Trigger: CCCATCCCTGAGCTTGAAGCAAGAATTGATGCTGTG...CCACAGCTTATCAAAATACTGCACTTGGACGGACAATTTTGGGACCAACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp AGCAGCAGCAAGCACTATTCTTGGCCCCTTATAATGTGTGGTTATATAATCCACCACAGCATCAATTCTTaGTTCAAGCTCAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: SSSKHYSWPLIMCGYIIHHSINS*FKLRDG
Trigger: CCCATCCCTGAGCTTGAAGCAAGAATTGATGCTGTG...GTGGATTATATAACCACACATTATAAGGGGCCAAGAATAGTGCTTGCTGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp CCTGCACCTTTATCTCCACAAAATACAACAGGTATTAGCACACTAGTCTCAGCTAATCTAATCTCAGCTTaGCTCTCCAGCACTGGTACC +
Preference number: 4 (lower is better)
Translates to: PAPLSPQNTTGISTLVSANLISA*LSSTGT
Trigger: GGTACCAGTGCTGGAGAGGCAAGCTGAGATTAGATT...AGCTGAGACTAGTGTGCTAATACCTGTTGTATTTTGTGGAGATAAAGGTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp AGCAGCAGCAAGCACTATTCTTGGCCCCTTATAATGTGTGGTTATATAATCCACGGGATCTCTTCTTGGTaGCTTGCCTTGAAAGCCATA +
Preference number: 4 (lower is better)
Translates to: SSSKHYSWPLIMCGYIIHGISSW*LALKAI
Trigger: TATGGCTTTCAAGGCAAGGCACCAAGAAGAGATCCC...GTGGATTATATAACCACACATTATAAGGGGCCAAGAATAGTGCTTGCTGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443722.5
CDS-3UTR CCA 90 bp GTAGGAAGTGTTGAAAGACTGAAAGCTATGGCAAAGATTGCCATGACAAGTGAGAGTTCCAGATCTAACTaGGATCTCTTCTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: VGSVERLKAMAKIAMTSESSRSN*DLFLVP
Trigger: GGGCACCAAGAAGAGATCCCAGTTAGATCTGGAACT...CTCACTTGTCATGGCAATCTTTGCCATAGCTTTCAGTCTTTCAACACTTCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000456433.5
CDS-3UTR CCA 90 bp CTATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCAATTTCTACAGCTCTTaGCAAGTCTTTAGAGAATGC +
Preference number: 4 (lower is better)
Translates to: LLQGAPKASCHPSHESHFNFYSS*QVFREC
Trigger: GCATTCTCTAAAGACTTGCCAAGAGCTGTAGAAATT...GAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CCA 90 bp ATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCTTAATTTCTACAGCTCTTaGCAAGTCTTTAGAGAATGC +
Preference number: 4 (lower is better)
Translates to: MCPTNSFNSYCKVRQRHLNFYSS*QVFREC
Trigger: GCATTCTCTAAAGACTTGCCAAGAGCTGTAGAAATT...AAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CCA 90 bp AGTGTTGAAAGACTGAAAGCTATGGCAAAGATTGCCATGACAAGTGAGCTGGGCAGCAAGCACTATTCTTaGCCCCTTATAATGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SVERLKAMAKIAMTSELGSKHYS*PLIMCG
Trigger: ACCACACATTATAAGGGGCCAAGAATAGTGCTTGCT...GCCCAGCTCACTTGTCATGGCAATCTTTGCCATAGCTTTCAGTCTTTCAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CCA 90 bp CACTTAGCGAATACTTGTGGACCACAAGACTTGTCTGAGAACATGTTCAAAGACGAGACAGATTGTATCTaGATGTGCCCAACCAACAGC +
Preference number: 4 (lower is better)
Translates to: HLANTCGPQDLSENMFKDETDCI*MCPTNS
Trigger: GCTGTTGGTTGGGCACATCCAGATACAATCTGTCTC...GTCTTTGAACATGTTCTCAGACAAGTCTTGTGGTCCACAAGTATTCGCTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CCA 90 bp TTGCTAGATAAATTCATTCCTCCCCCAAAAGAGCGATCCCAGTTGCCAATCAGCCTTCAAGCTCAGGGATaGGAATCCTTCTATTATAGC +
Preference number: 4 (lower is better)
Translates to: LLDKFIPPPKERSQLPISLQAQG*ESFYYS
Trigger: GCTATAATAGAAGGATTCCCATCCCTGAGCTTGAAG...GCTGATTGGCAACTGGGATCGCTCTTTTGGGGGAGGAATGAATTTATCTAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CCA 90 bp CCGCAGTTTCTAGTAGTAGTCAGGCTACTGGTAGTATTAGTCTGTGTTGTCACTACAGACTTCACCCCTTaGACAACAGAAGAACAGAAG +
Preference number: 4 (lower is better)
Translates to: PQFLVVVRLLVVLVCVVTTDFTP*TTEEQK
Trigger: CTTCTGTTCTTCTGTTGTCCAAGGGGTGAAGTCTGT...AGTGACAACACAGACTAATACTACCAGTAGCCTGACTACTACTAGAAACTGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CCA 90 bp CCGCAGTTTCTAGTAGTAGTCAGGCTACTGGTAGTATTAGTCTGTGTTGTCACTCCTTTGCCTCTTTTATaGAAATGGGAAGGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PQFLVVVRLLVVLVCVVTPLPLL*KWEGSF
Trigger: GAAGGAGCCTTCCCATTTCCATAAAAGAGGCAAAGG...AGTGACAACACAGACTAATACTACCAGTAGCCTGACTACTACTAGAAACTGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CCA 90 bp ATTTTTCTTAATCAGGTCCATATACAGACTTCACCCCTTGGACAACAGAAGAACCATGTTGGAGGGAGGTaGGCCCTGATATTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: IFLNQVHIQTSPLGQQKNHVGGR*ALIFVQ
Trigger: CTGGACAAATATCAGGGCCCACCTCCCTCCAACATG...GTTCTTCTGTTGTCCAAGGGGTGAAGTCTGTATATGGACCTGATTAAGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CCA 90 bp ATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGATGGCAAAAATAGAACTCTaGAGCGGTACCCATTTCACT +
Preference number: 4 (lower is better)
Translates to: IPVANQRVCNHETDCIWMAKIEL*SGTHFT
Trigger: AGTGAAATGGGTACCGCTCCAGAGTTCTATTTTTGC...CATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR TCA 90 bp TGTATCTGTGTAGGAAGTGTTGAAAGACTGAAAGCTATGGCAAAGATTGCCATGTCTTCTTGGTGCCCTTaGAAGCCATATGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: CICVGSVERLKAMAKIAMSSWCP*KPYAPE
Trigger: TTCTGGAGCATATGGCTTTCAAGGGCACCAAGAAGA...CATGGCAATCTTTGCCATAGCTTTCAGTCTTTCAACACTTCCTACACAGATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000456433.5
CDS-3UTR TCA 90 bp TCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCTTCGAAGTGTTGAAAGACTaGAAGCTATGGCAAAGATTG +
Preference number: 4 (lower is better)
Translates to: SSTGTLGTWLNFARFVSFEVLKD*KLWQRL
Trigger: CAATCTTTGCCATAGCTTTCAGTCTTTCAACACTTC...GAAGGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR TCA 90 bp CATGTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATACTGTGTAGGAAGTGTTaGAAGACTGAAAGCTATGGC +
Preference number: 4 (lower is better)
Translates to: HVACLQQWMIHKPYTVPILCRKC*KTESYG
Trigger: GCCATAGCTTTCAGTCTTTCAACACTTCCTACACAG...TATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp TCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCTTCATGGGGTCAATATTATaGGGAAGAAATGAGCAACCT +
Preference number: 4 (lower is better)
Translates to: SSTGTLGTWLNFARFVSFMGSIL*GRNEQP
Trigger: AGGTTGCTCATTTCTTCCTCATAATATTGACCCCAT...GAAGGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR TCA 90 bp CCTGCACCTTTATCTCCACAAAATACAACAGGTATTAGCACACTAGTCTCAGCTCAAAGAAGGACTGCATaGAACGATACAAGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: PAPLSPQNTTGISTLVSAQRRTA*NDTRLQ
Trigger: CTGCAACCTTGTATCGTTTCATGCAGTCCTTCTTTG...AGCTGAGACTAGTGTGCTAATACCTGTTGTATTTTGTGGAGATAAAGGTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGATCCAGAGTCCAACTGTaGATGTTGAGAGCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGSRVQL*MLRAQS
Trigger: ACTCTGGGCTCTCAACATGCACAGTTGGACTCTGGA...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR GCA 90 bp CTCTCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCTTGGTTTCAACTTCCTaGATCTCTCTAAGGATTACT +
Preference number: 4 (lower is better)
Translates to: LSSTGTLGTWLNFARFVSLVSTS*ISLRIT
Trigger: AGTAATCCTTAGAGAGATGCAGGAAGTTGAAACCAA...GGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp CCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGATGTGCTTTCTCCTTTGTGTGTaGATAAAGAGTCACCGAAAT +
Preference number: 4 (lower is better)
Translates to: PVANQRVCNHETDCIWMCFLLCV*IKSHRN
Trigger: ATTTCGGTGACTCTTTATGCACACACAAAGGAGAAA...GCACATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp CCTGCACCTTTATCTCCACAAAATACAACAGGTATTAGCACACTAGTCTCAGCTGATTGTATCTGGATGTaGCCAACCAACAGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: PAPLSPQNTTGISTLVSADCIWM*PTNSFN
Trigger: GTTGAAGCTGTTGGTTGGGCACATCCAGATACAATC...AGCTGAGACTAGTGTGCTAATACCTGTTGTATTTTGTGGAGATAAAGGTGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp TGCAACCTCACTTTCTGTGACACTTGTACAGAGTCGCATCCATTCTTTTTGAACGATTGTATCTGGATGTaGCCAACCAACAGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: CNLTFCDTCTESHPFFLNDCIWM*PTNSFN
Trigger: GTTGAAGCTGTTGGTTGGGCACATCCAGATACAATC...GTTCAAAAAGAATGGATGCGACTCTGTACAAGTGTCACAGAAAGTGAGGTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp CACTTAGCGAATACTTGTGGACCACAAGACTTGTCTGAGAACATGTTCAAAGACGCCAATCAGCGTGTTTaGAACCATGAGACAGATTGT +
Preference number: 4 (lower is better)
Translates to: HLANTCGPQDLSENMFKDANQRV*NHETDC
Trigger: ACAATCTGTCTCATGGTTGCAAACACGCTGATTGGC...GTCTTTGAACATGTTCTCAGACAAGTCTTGTGGTCCACAAGTATTCGCTAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp AGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTTAAAATCTGGTAGTTaGTTAATGGGACCAACAGCA +
Preference number: 4 (lower is better)
Translates to: RAIPVANQRVCNHETDCILKSGS*LMGPTA
Trigger: TGCTGTTGGTCCCATTAAGCAACTACCAGATTTTAA...GATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453466.1
CDS-3UTR CCA 90 bp CAGTTATTGGAAGTGTTCAGCATCGGCTCCCAAGATTTTAGCAGATGTGACGAAAGCAAGCACTATTCTTaGCCCCTTATAATGTGTGGT +
Preference number: 4 (lower is better)
Translates to: QLLEVFSIGSQDFSRCDESKHYS*PLIMCG
Trigger: ACCACACATTATAAGGGGCCAAGAATAGTGCTTGCT...TTCGTCACATCTGCTAAAATCTTGGGAGCCGATGCTGAACACTTCCAATAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CCA 90 bp CATTTTCGTATCTACTTCCAGCATCAATCCAGAGTCCAACTGTGCATGTTGAGATCAAGCAATTCATCATaGGAAACACCTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: HFRIYFQHQSRVQLCMLRSSNSS*ETPPAA
Trigger: TGCTGCTGGAGGTGTTTCCCATGATGAATTGCTTGA...TCTCAACATGCACAGTTGGACTCTGGATTGATGCTGGAAGTAGATACGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR CCA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGAGCAGGGAGGCAGAGCTaGTATTTCTCCTTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGAGRQS*YFSFVC
Trigger: ACACACAAAGGAGAAATACCAGCTCTGCCTCCCTGC...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR TCA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGTCTTCTTGGTGCCCTTaGAAGCCATATGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMSSWCP*KPYAPE
Trigger: TTCTGGAGCATATGGCTTTCAAGGGCACCAAGAAGA...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428154.5
CDS-3UTR TCA 90 bp AGCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATCCTTGGAGGTATAGGCATTaGGATGAGCACCCATATTTT +
Preference number: 4 (lower is better)
Translates to: SMSATVDDSQTIYSPHNPWRYRH*DEHPYF
Trigger: AAAATATGGGTGCTCATCTCAATGCCTATACCTCCA...AGGATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp GTAGGAAGTGTTGAAAGACTGAAAGCTATGGCAAAGATTGCCATGACAAGTGAGTGGAGGTATAGGCATTaGGATGAGCACCCATATTTT +
Preference number: 4 (lower is better)
Translates to: VGSVERLKAMAKIAMTSEWRYRH*DEHPYF
Trigger: AAAATATGGGTGCTCATCTCAATGCCTATACCTCCA...CTCACTTGTCATGGCAATCTTTGCCATAGCTTTCAGTCTTTCAACACTTCCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp TGTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATGCGTGTTTGCAACCATaGGACAGATTGTATCTGGAT +
Preference number: 4 (lower is better)
Translates to: CSMSATVDDSQTIYSPHNACLQP*DRLYLD
Trigger: ATCCAGATACAATCTGTCTCATGGTTGCAAACACGC...ATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp GCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATCCTGGAAGTGTTGAAAGACTaGAAGCTATGGCAAAGATTG +
Preference number: 4 (lower is better)
Translates to: ACLQQWMIHKPYTVPIILEVLKD*KLWQRL
Trigger: CAATCTTTGCCATAGCTTTCAGTCTTTCAACACTTC...CAGGATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp TCCCAAGATTTTAGCAGATGTGACGAAGAGAACACCACACTACAACACAATCTACTGTGTAGGAAGTGTTaGAAGACTGAAAGCTATGGC +
Preference number: 4 (lower is better)
Translates to: SQDFSRCDEENTTLQHNLLCRKC*KTESYG
Trigger: GCCATAGCTTTCAGTCTTTCAACACTTCCTACACAG...TAGATTGTGTTGTAGTGTGGTGTTCTCTTCGTCACATCTGCTAAAATCTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR TCA 90 bp GAAACTTTGCTAAGTCAAGCAATTCATCATGGGAAACACCTCCAGCAGCAGCAACGCATCCATTCTTTTTaGACAACATGTAGCATGTCT +
Preference number: 4 (lower is better)
Translates to: ETLLSQAIHHGKHLQQQQRIHSF*TTCSMS
Trigger: AGACATGCTACATGTTGTTCAAAAAGAATGGATGCG...TTGCTGCTGCTGGAGGTGTTTCCCATGATGAATTGCTTGACTTAGCAAAGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR TCA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGACAACCTCACTTTCTGTaGCACTTGTACAGAGTCGCA +
Preference number: 4 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGQPHFL*HLYRVA
Trigger: TGCGACTCTGTACAAGTGTCACAGAAAGTGAGGTTG...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428154.5
ENST00000453466.1
CDS-3UTR TCA 90 bp CACTTAGCGAATACTTGTGGACCACAAGACTTGTCTGAGAACATGTTCAAAGACTTGTGGTTGTGTTTTTaGGTCCAAGAGTCCAACAGT +
Preference number: 4 (lower is better)
Translates to: HLANTCGPQDLSENMFKDLWLCF*VQESNS
Trigger: ACTGTTGGACTCTTGGACTCAAAAACACAACCACAA...GTCTTTGAACATGTTCTCAGACAAGTCTTGTGGTCCACAAGTATTCGCTAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR TCA 90 bp TCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCTTCAGTGTAAAACAAGAATaGTTTCCAGGGTTTCTATCC +
Preference number: 4 (lower is better)
Translates to: SSTGTLGTWLNFARFVSFSVKQE*FPGFLS
Trigger: GGATAGAAACCCTGGAAATCATTCTTGTTTTACACT...GAAGGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR TCA 90 bp TCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCTTCGGGTTTCAGAACACCTaGAAGACACTTCTTTATAAA +
Preference number: 4 (lower is better)
Translates to: SSTGTLGTWLNFARFVSFGFQNT*KTLLYK
Trigger: TTTATAAAGAAGTGTCTTTCAGGTGTTCTGAAACCC...GAAGGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp CTCTCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCCAAGTCTTTAGAGAATaGTTTGGCATAGTATACAGT +
Preference number: 4 (lower is better)
Translates to: LSSTGTLGTWLNFARFVSQVFRE*FGIVYS
Trigger: ACTGTATACTATGCCAAAGCATTCTCTAAAGACTTG...GGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp AGATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCAAGTCTTTAGAGAATaGTTTGGCATAGTATACAGT +
Preference number: 4 (lower is better)
Translates to: RLYLDVPNQQLQQLLQGAQVFRE*FGIVYS
Trigger: ACTGTATACTATGCCAAAGCATTCTCTAAAGACTTG...CGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR GCA 90 bp AATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGATGTGCCCAACCAACTTGGTTTCAACTTCCTaGATCTCTCTAAGGATTACT +
Preference number: 4 (lower is better)
Translates to: NQRVCNHETDCIWMCPTNLVSTS*ISLRIT
Trigger: AGTAATCCTTAGAGAGATGCAGGAAGTTGAAACCAA...GTTGGTTGGGCACATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp ATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGATGTTTCTCCTTTGTGTGTaGATAAAGAGTCACCGAAAT +
Preference number: 4 (lower is better)
Translates to: IPVANQRVCNHETDCIWMFLLCV*IKSHRN
Trigger: ATTTCGGTGACTCTTTATGCACACACAAAGGAGAAA...CATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGACAGCTATTGCAAGGTaGGCCAAAGGCATCTTGTCA +
Preference number: 4 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMTAIAR*AKGILS
Trigger: TGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGT...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR GCA 90 bp TCACGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAAGCTTCAACAGCTATTaGAAGGTGCGCCAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: SRSQHMLLRICLKSGSCLSFNSY*KVRQRH
Trigger: ATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCT...TAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR GCA 90 bp CTCCCAATGTGCTGTTTTGTATTATATCAGCAAGAATTTCTACAGCTCTTGGCAAGCTTCAACAGCTATTaGAAGGTGCGCCAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: LPMCCFVLYQQEFLQLLASFNSY*KVRQRH
Trigger: ATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCT...TGCCAAGAGCTGTAGAAATTCTTGCTGATATAATACAAAACAGCACATTGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGAAGAGCGATCCCAGTTaGCAATCAGCGTGTTTGCAA +
Preference number: 4 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMKSDPS*QSACLQ
Trigger: TTGCAAACACGCTGATTGGCAACTGGGATCGCTCTT...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR GCA 90 bp TCACGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTACACAGCATCAATTCTTaGTTCAAGCTCAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: SRSQHMLLRICLKSGSCLHSINS*FKLRDG
Trigger: CCCATCCCTGAGCTTGAAGCAAGAATTGATGCTGTG...TAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428154.5
ENST00000453466.1
CDS-3UTR GCA 90 bp CTCCTTTGTGTGTGCATAAAGAGTCACCGAAATGAAACTTTGCTAAGTCAAGCAGCCTTGAAAGCCATATaGTCCAGAAAGTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LLCVCIKSHRNETLLSQAALKAI*SRKCAV
Trigger: AACAGCACACTTTCTGGAGCATATGGCTTTCAAGGC...TGCTTGACTTAGCAAAGTTTCATTTCGGTGACTCTTTATGCACACACAAAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443722.5
ENST00000453466.1
CDS-3UTR GCA 90 bp TCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATCCTGTATCTGCCTTGAAAGCCATATaGTCCAGAAAGTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SATVDDSQTIYSPHNPVSALKAI*SRKCAV
Trigger: AACAGCACACTTTCTGGAGCATATGGCTTTCAAGGC...AGATACAGGATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443722.5
ENST00000453466.1
CDS-3UTR GCA 90 bp AATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGATGTGCCCAACCAACAATTGTCCGTCCAAGTaGAGTATTTTGATAAGCTCT +
Preference number: 4 (lower is better)
Translates to: NQRVCNHETDCIWMCPTNNCPSK*SILISS
Trigger: AGAGCTTATCAAAATACTGCACTTGGACGGACAATT...GTTGGTTGGGCACATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456433.5
CDS-3UTR CCA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGAGTTCCAGATCTAACTaGGATCTCTTCTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMSSRSN*DLFLVP
Trigger: GGGCACCAAGAAGAGATCCCAGTTAGATCTGGAACT...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428154.5
CDS-3UTR CCA 90 bp TCACGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAGAGACAGATTGTATCTaGATGTGCCCAACCAACAGC +
Preference number: 4 (lower is better)
Translates to: SRSQHMLLRICLKSGSCLETDCI*MCPTNS
Trigger: GCTGTTGGTTGGGCACATCCAGATACAATCTGTCTC...TAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CCA 90 bp CAGTTATTGGAAGTGTTCAGCATCGGCTCCCAAGATTTTAGCAGATGTGACGAAGCATGTCTGCAACAGTaGATGATTCACAAACCATAT +
Preference number: 4 (lower is better)
Translates to: QLLEVFSIGSQDFSRCDEACLQQ*MIHKPY
Trigger: ATATGGTTTGTGAATCATCCACTGTTGCAGACATGC...TTCGTCACATCTGCTAAAATCTTGGGAGCCGATGCTGAACACTTCCAATAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CCA 90 bp CCGCAGTTTCTAGTAGTAGTCAGGCTACTGGTAGTATTAGTCTGTGTTGTCACTTTTTCAGAAGATTTCTaGCTCGTGCAACCTCACTTT +
Preference number: 4 (lower is better)
Translates to: PQFLVVVRLLVVLVCVVTFSEDF*LVQPHF
Trigger: AAAGTGAGGTTGCACGAGCCAGAAATCTTCTGAAAA...AGTGACAACACAGACTAATACTACCAGTAGCCTGACTACTACTAGAAACTGCGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CCA 90 bp CACTTAGCGAATACTTGTGGACCACAAGACTTGTCTGAGAACATGTTCAAAGACCTTCAAGCTCAGGGATaGGAATCCTTCTATTATAGC +
Preference number: 4 (lower is better)
Translates to: HLANTCGPQDLSENMFKDLQAQG*ESFYYS
Trigger: GCTATAATAGAAGGATTCCCATCCCTGAGCTTGAAG...GTCTTTGAACATGTTCTCAGACAAGTCTTGTGGTCCACAAGTATTCGCTAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CCA 90 bp AGATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGATTTTGATAAGCTCTTaGCAAGTCTTTAGAGAATGC +
Preference number: 4 (lower is better)
Translates to: RLYLDVPNQQLQQLLQGAILISS*QVFREC
Trigger: GCATTCTCTAAAGACTTGCCAAGAGCTTATCAAAAT...CGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456433.5
CDS-3UTR TCA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGCTTCCGAAGCTACTCTaGGTCCACTTTCTAAACATG +
Preference number: 4 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMLPKLL*VHFLNM
Trigger: CATGTTTAGAAAGTGGACTCAGAGTAGCTTCGGAAG...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR TCA 90 bp ATCAGCAAGAATTTCTACAGCTCTTGGCAAGTCTTTAGAGAATGCTTTGGCATACTTCCGAAGCTACTCTaGGTCCACTTTCTAAACATG +
Preference number: 4 (lower is better)
Translates to: ISKNFYSSWQVFRECFGILPKLL*VHFLNM
Trigger: CATGTTTAGAAAGTGGACTCAGAGTAGCTTCGGAAG...TATGCCAAAGCATTCTCTAAAGACTTGCCAAGAGCTGTAGAAATTCTTGCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR TCA 90 bp ACATTTGCCTACCAATATCTTCACAAATTGGAGTTGAACCATCAAGCTGCAACACTTCCGAAGCTACTCTaGGTCCACTTTCTAAACATG +
Preference number: 4 (lower is better)
Translates to: TFAYQYLHKLELNHQAATLPKLL*VHFLNM
Trigger: CATGTTTAGAAAGTGGACTCAGAGTAGCTTCGGAAG...TGTTGCAGCTTGATGGTTCAACTCCAATTTGTGAAGATATTGGTAGGCAAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR TCA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGAGCGTGTTTGCAACCATaGGACAGATTGTATCTGGAT +
Preference number: 4 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGACLQP*DRLYLD
Trigger: ATCCAGATACAATCTGTCTCATGGTTGCAAACACGC...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR TCA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGCGTGTTTGCAACCATaGGACAGATTGTATCTGGAT +
Preference number: 4 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMACLQP*DRLYLD
Trigger: ATCCAGATACAATCTGTCTCATGGTTGCAAACACGC...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR TCA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGCTGTGTAGGAAGTGTTaGAAGACTGAAAGCTATGGC +
Preference number: 4 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMLCRKC*KTESYG
Trigger: GCCATAGCTTTCAGTCTTTCAACACTTCCTACACAG...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR TCA 90 bp CCTGCACCTTTATCTCCACAAAATACAACAGGTATTAGCACACTAGTCTCAGCTCGCATCCATTCTTTTTaGACAACATGTAGCATGTCT +
Preference number: 4 (lower is better)
Translates to: PAPLSPQNTTGISTLVSARIHSF*TTCSMS
Trigger: AGACATGCTACATGTTGTTCAAAAAGAATGGATGCG...AGCTGAGACTAGTGTGCTAATACCTGTTGTATTTTGTGGAGATAAAGGTGCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR TCA 90 bp CCTGCACCTTTATCTCCACAAAATACAACAGGTATTAGCACACTAGTCTCAGCTAGTAGAGCCAAGAAATaGCAATCTTTGTTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PAPLSPQNTTGISTLVSASRAKK*QSLLCV
Trigger: CACACACAACAAAGATTGTCATTTCTTGGCTCTACT...AGCTGAGACTAGTGTGCTAATACCTGTTGTATTTTGTGGAGATAAAGGTGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp ATTTTTCTTAATCAGGTCCATATACAGACTTCACCCCTTGGACAACAGAAGAACCCCTTGAAAGCCATATaGTCCAGAAAGTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: IFLNQVHIQTSPLGQQKNPLKAI*SRKCAV
Trigger: AACAGCACACTTTCTGGAGCATATGGCTTTCAAGGG...GTTCTTCTGTTGTCCAAGGGGTGAAGTCTGTATATGGACCTGATTAAGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGACCCTTGAAAGCCATATaGTCCAGAAAGTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGPLKAI*SRKCAV
Trigger: AACAGCACACTTTCTGGAGCATATGGCTTTCAAGGG...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428154.5
CDS-3UTR GCA 90 bp CCGCAGTTTCTAGTAGTAGTCAGGCTACTGGTAGTATTAGTCTGTGTTGTCACTAATTGTCCGTCCAAGTaGAGTATTTTGATAAGCTGT +
Preference number: 4 (lower is better)
Translates to: PQFLVVVRLLVVLVCVVTNCPSK*SILISC
Trigger: ACAGCTTATCAAAATACTGCACTTGGACGGACAATT...AGTGACAACACAGACTAATACTACCAGTAGCCTGACTACTACTAGAAACTGCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp ATGAGACAGATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAATTGTCCGTCCAAGTaGAGTATTTTGATAAGCTGT +
Preference number: 4 (lower is better)
Translates to: MRQIVSGCAQPTASTAIANCPSK*SILISC
Trigger: ACAGCTTATCAAAATACTGCACTTGGACGGACAATT...TGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCTGTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp TCACGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAGATTGTATCTGGATGTaGCCAACCAACAGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: SRSQHMLLRICLKSGSCLDCIWM*PTNSFN
Trigger: GTTGAAGCTGTTGGTTGGGCACATCCAGATACAATC...TAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR GCA 90 bp CTCCCAATGTGCTGTTTTGTATTATATCAGCAAGAATTTCTACAGCTCTTGGCAGATTGTATCTGGATGTaGCCAACCAACAGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: LPMCCFVLYQQEFLQLLADCIWM*PTNSFN
Trigger: GTTGAAGCTGTTGGTTGGGCACATCCAGATACAATC...TGCCAAGAGCTGTAGAAATTCTTGCTGATATAATACAAAACAGCACATTGGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGCCAATCAGCGTGTTTaGAACCATGAGACAGATTGT +
Preference number: 4 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMANQRV*NHETDC
Trigger: ACAATCTGTCTCATGGTTGCAAACACGCTGATTGGC...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR GCA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGAAGATTTCTGGCTCGTaGAACCTCACTTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMKISGS*NLTFCD
Trigger: GTCACAGAAAGTGAGGTTGCACGAGCCAGAAATCTT...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428154.5
ENST00000453466.1
CDS-3UTR GCA 90 bp CCAATGTGCTGTTTTGTATTATATCAGCAAGAATTTCTACAGCTCTTGGCAAGTCTCTTCTTGGTGCCTTaGCTTGAAAGCCATATGCTC +
Preference number: 4 (lower is better)
Translates to: PMCCFVLYQQEFLQLLASLFLVP*LESHML
Trigger: GAGCATATGGCTTTCAAGGCAAGGCACCAAGAAGAG...ACTTGCCAAGAGCTGTAGAAATTCTTGCTGATATAATACAAAACAGCACATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443722.5
CDS-3UTR CCA 90 bp CAGTTATTGGAAGTGTTCAGCATCGGCTCCCAAGATTTTAGCAGATGTGACGAAAATTTCTACAGCTCTTaGCAAGTCTTTAGAGAATGC +
Preference number: 4 (lower is better)
Translates to: QLLEVFSIGSQDFSRCDENFYSS*QVFREC
Trigger: GCATTCTCTAAAGACTTGCCAAGAGCTGTAGAAATT...TTCGTCACATCTGCTAAAATCTTGGGAGCCGATGCTGAACACTTCCAATAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CCA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGATCAAGCAATTCATCATaGGAAACACCTCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGSSNSS*ETPPAA
Trigger: TGCTGCTGGAGGTGTTTCCCATGATGAATTGCTTGA...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CCA 90 bp TGCAACCTCACTTTCTGTGACACTTGTACAGAGTCGCATCCATTCTTTTTGAACGCATGTCTGCAACAGTaGATGATTCACAAACCATAT +
Preference number: 4 (lower is better)
Translates to: CNLTFCDTCTESHPFFLNACLQQ*MIHKPY
Trigger: ATATGGTTTGTGAATCATCCACTGTTGCAGACATGC...GTTCAAAAAGAATGGATGCGACTCTGTACAAGTGTCACAGAAAGTGAGGTTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CCA 90 bp GTAGGAAGTGTTGAAAGACTGAAAGCTATGGCAAAGATTGCCATGACAAGTGAGGCATGTCTGCAACAGTaGATGATTCACAAACCATAT +
Preference number: 4 (lower is better)
Translates to: VGSVERLKAMAKIAMTSEACLQQ*MIHKPY
Trigger: ATATGGTTTGTGAATCATCCACTGTTGCAGACATGC...CTCACTTGTCATGGCAATCTTTGCCATAGCTTTCAGTCTTTCAACACTTCCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CCA 90 bp CAGTTATTGGAAGTGTTCAGCATCGGCTCCCAAGATTTTAGCAGATGTGACGAAAAACTTTCTAGGCCCTaGCAGATAATGAAATCAGTA +
Preference number: 4 (lower is better)
Translates to: QLLEVFSIGSQDFSRCDEKLSRP*QIMKSV
Trigger: TACTGATTTCATTATCTGCCAGGGCCTAGAAAGTTT...TTCGTCACATCTGCTAAAATCTTGGGAGCCGATGCTGAACACTTCCAATAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CCA 90 bp TCCCAAGATTTTAGCAGATGTGACGAAGAGAACACCACACTACAACACAATCTAGGTACCTTGGGCACTTaGCTTAATTTTGCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: SQDFSRCDEENTTLQHNLGTLGT*LNFARF
Trigger: AAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACC...TAGATTGTGTTGTAGTGTGGTGTTCTCTTCGTCACATCTGCTAAAATCTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CCA 90 bp ATTTTTCTTAATCAGGTCCATATACAGACTTCACCCCTTGGACAACAGAAGAACCCTCTTTTATGGAAATaGGAAGGCTCCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: IFLNQVHIQTSPLGQQKNPLLWK*EGSFLF
Trigger: GAAGAGGAAGGAGCCTTCCCATTTCCATAAAAGAGG...GTTCTTCTGTTGTCCAAGGGGTGAAGTCTGTATATGGACCTGATTAAGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR TCA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGATGGAGGTATAGGCATTaGGATGAGCACCCATATTTT +
Preference number: 4 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGWRYRH*DEHPYF
Trigger: AAAATATGGGTGCTCATCTCAATGCCTATACCTCCA...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR TCA 90 bp CTCACTTTCTGTGACACTTGTACAGAGTCGCATCCATTCTTTTTGAACAACATGAATATAATGATTCATTaGTGTCCAGGTTCGCGGGAA +
Preference number: 4 (lower is better)
Translates to: LTFCDTCTESHPFFLNNMNIMIH*CPGSRE
Trigger: TTCCCGCGAACCTGGACATCAATGAATCATTATATT...CATGTTGTTCAAAAAGAATGGATGCGACTCTGTACAAGTGTCACAGAAAGTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR GCA 90 bp AATTGTCCGTCCAAGTGCAGTATTTTGATAAGCTGTGGCATGAAGATAATCAAAGATTGTATCTGGATGTaGCCAACCAACAGCTTCAAC +
Preference number: 4 (lower is better)
Translates to: NCPSKCSILISCGMKIIKDCIWM*PTNSFN
Trigger: GTTGAAGCTGTTGGTTGGGCACATCCAGATACAATC...TTTGATTATCTTCATGCCACAGCTTATCAAAATACTGCACTTGGACGGACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp AAGGAGTTTATTCTCCTGCACCTTTATCTCCACAAAATACAACAGGTATTAGCAAAGATTTCTGGCTCGTaGAACCTCACTTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: KEFILLHLYLHKIQQVLAKISGS*NLTFCD
Trigger: GTCACAGAAAGTGAGGTTGCACGAGCCAGAAATCTT...TGCTAATACCTGTTGTATTTTGTGGAGATAAAGGTGCAGGAGAATAAACTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp CATGTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAGTTGAACCATCAAGCTaGAACAACATGTTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: HVACLQQWMIHKPYTVPIVEPSS*NNMFVF
Trigger: GAAAACAAACATGTTGTTGCAGCTTGATGGTTCAAC...TATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp GTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATCGTTGAACCATCAAGCTaGAACAACATGTTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: VACLQQWMIHKPYTVPIIVEPSS*NNMFVF
Trigger: GAAAACAAACATGTTGTTGCAGCTTGATGGTTCAAC...GATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGAAACTGGGATCTCTTTTaGCTTGAAAGCCATATGCTC +
Preference number: 4 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGNWDLF*LESHML
Trigger: GAGCATATGGCTTTCAAGGCAAAAGAGATCCCAGTT...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453466.1
CDS-3UTR CCA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGACATTCAGAACAACTTaGGTAGCAGCCTGTGTACTT +
Preference number: 4 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMTFRTT*VAACVL
Trigger: AAGTACACAGGCTGCTACCCAAGTTGTTCTGAATGT...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CCA 90 bp TGTAAAACAAGAATGATTTCCAGGGTTTCTATCCAGCAAAAGTTTAACTGTGAGAGTTCCAGATCTAACTaGGATCTCTTCTTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: CKTRMISRVSIQQKFNCESSRSN*DLFLVP
Trigger: GGGCACCAAGAAGAGATCCCAGTTAGATCTGGAACT...CTCACAGTTAAACTTTTGCTGGATAGAAACCCTGGAAATCATTCTTGTTTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CCA 90 bp TCACGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAAGCAAGCACTATTCTTaGCCCCTTATAATGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SRSQHMLLRICLKSGSCLSKHYS*PLIMCG
Trigger: ACCACACATTATAAGGGGCCAAGAATAGTGCTTGCT...TAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CCA 90 bp CTCTGCTTCTCCCAATGTGCTGTTTTGTATTATATCAGCAAGAATTTCTACAGCAGCAAGCACTATTCTTaGCCCCTTATAATGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LCFSQCAVLYYISKNFYSSKHYS*PLIMCG
Trigger: ACCACACATTATAAGGGGCCAAGAATAGTGCTTGCT...GCTGTAGAAATTCTTGCTGATATAATACAAAACAGCACATTGGGAGAAGCAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CCA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGAGCAAGCACTATTCTTaGCCCCTTATAATGTGTGGT +
Preference number: 4 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMSKHYS*PLIMCG
Trigger: ACCACACATTATAAGGGGCCAAGAATAGTGCTTGCT...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CCA 90 bp CAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATCCTGTATCTGTGTGCATGTCTGCAACAGTaGATGATTCACAAACCATAT +
Preference number: 4 (lower is better)
Translates to: QQWMIHKPYTVPIILYLCACLQQ*MIHKPY
Trigger: ATATGGTTTGTGAATCATCCACTGTTGCAGACATGC...ACACAGATACAGGATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CCA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGCTTCAAGCTCAGGGATaGGAATCCTTCTATTATAGC +
Preference number: 4 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMLQAQG*ESFYYS
Trigger: GCTATAATAGAAGGATTCCCATCCCTGAGCTTGAAG...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428154.5
ENST00000453466.1
3UTR CAA 72 bp CTTTGTGTGTGCATAAAGAGTCACCGAAATGAAACTTaGCTAAGTCAAGCAATTCATCATGGGAAACACCTC +
Preference number: 4 (lower is better)
Translates to: LCVCIKSHRNET*LSQAIHHGKHL
Trigger: GAGGTGTTTCCCATGATGAATTGCTTGACTTAGCAAAGTTTCATTTCGGTGACTCTTTATGCACACACAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
3UTR CAA 72 bp TTGAAAGCCATATGCTCCAGAAAGTGTGCTGTTCCATaGTTCTTCTCATTTTCGTATCTACTTCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: LKAICSRKCAVP*FFSFSYLLPAS
Trigger: TGATGCTGGAAGTAGATACGAAAATGAGAAGAACAATGGAACAGCACACTTTCTGGAGCATATGGCTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR TCA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGAAAGAGTCACCGAAATaGAACTTTGCTAAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMKESPK*NFAKSS
Trigger: GCTTGACTTAGCAAAGTTTCATTTCGGTGACTCTTT...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR TCA 90 bp CTCTGCTTCTCCCAATGTGCTGTTTTGTATTATATCAGCAAGAATTTCTACAGCAAAGAGTCACCGAAATaGAACTTTGCTAAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: LCFSQCAVLYYISKNFYSKESPK*NFAKSS
Trigger: GCTTGACTTAGCAAAGTTTCATTTCGGTGACTCTTT...GCTGTAGAAATTCTTGCTGATATAATACAAAACAGCACATTGGGAGAAGCAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR TCA 90 bp ATAGATTTGATATTTTCAGTTGGTCCCAAAATTGTCCGTCCAAGTGCAGTATTTGCGTGTTTGCAACCATaGGACAGATTGTATCTGGAT +
Preference number: 4 (lower is better)
Translates to: IDLIFSVGPKIVRPSAVFACLQP*DRLYLD
Trigger: ATCCAGATACAATCTGTCTCATGGTTGCAAACACGC...AAATACTGCACTTGGACGGACAATTTTGGGACCAACTGAAAATATCAAATCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR TCA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGAGAAGTGTTGAAAGACTaGAAGCTATGGCAAAGATTG +
Preference number: 4 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGEVLKD*KLWQRL
Trigger: CAATCTTTGCCATAGCTTTCAGTCTTTCAACACTTC...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR TCA 90 bp TTACGACTTATAGATTTGATATTTTCAGTTGGTCCCAAAATTGTCCGTCCAAGTCTGTGTAGGAAGTGTTaGAAGACTGAAAGCTATGGC +
Preference number: 4 (lower is better)
Translates to: LRLIDLIFSVGPKIVRPSLCRKC*KTESYG
Trigger: GCCATAGCTTTCAGTCTTTCAACACTTCCTACACAG...ACTTGGACGGACAATTTTGGGACCAACTGAAAATATCAAATCTATAAGTCGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR TCA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGACGCATCCATTCTTTTTaGACAACATGTAGCATGTCT +
Preference number: 4 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGRIHSF*TTCSMS
Trigger: AGACATGCTACATGTTGTTCAAAAAGAATGGATGCG...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000428154.5
ENST00000453466.1
CDS-3UTR TCA 90 bp ATCAGCAAGAATTTCTACAGCTCTTGGCAAGTCTTTAGAGAATGCTTTGGCATACGCATCCATTCTTTTTaGACAACATGTAGCATGTCT +
Preference number: 4 (lower is better)
Translates to: ISKNFYSSWQVFRECFGIRIHSF*TTCSMS
Trigger: AGACATGCTACATGTTGTTCAAAAAGAATGGATGCG...TATGCCAAAGCATTCTCTAAAGACTTGCCAAGAGCTGTAGAAATTCTTGCTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp CAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATCCTGTATCTGTGTAATTGTCCGTCCAAGTaGAGTATTTTGATAAGCTGT +
Preference number: 4 (lower is better)
Translates to: QQWMIHKPYTVPIILYLCNCPSK*SILISC
Trigger: ACAGCTTATCAAAATACTGCACTTGGACGGACAATT...ACACAGATACAGGATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp TCCCAAGATTTTAGCAGATGTGACGAAGAGAACACCACACTACAACACAATCTATTTCTCCTTTGTGTGTaGATAAAGAGTCACCGAAAT +
Preference number: 4 (lower is better)
Translates to: SQDFSRCDEENTTLQHNLFLLCV*IKSHRN
Trigger: ATTTCGGTGACTCTTTATGCACACACAAAGGAGAAA...TAGATTGTGTTGTAGTGTGGTGTTCTCTTCGTCACATCTGCTAAAATCTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp TCCCAAGATTTTAGCAGATGTGACGAAGAGAACACCACACTACAACACAATCTAGTTGAACCATCAAGCTaGAACAACATGTTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SQDFSRCDEENTTLQHNLVEPSS*NNMFVF
Trigger: GAAAACAAACATGTTGTTGCAGCTTGATGGTTCAAC...TAGATTGTGTTGTAGTGTGGTGTTCTCTTCGTCACATCTGCTAAAATCTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp TCCCAAGATTTTAGCAGATGTGACGAAGAGAACACCACACTACAACACAATCTATTAAAATCTGGTAGTTaGTTAATGGGACCAACAGCA +
Preference number: 4 (lower is better)
Translates to: SQDFSRCDEENTTLQHNLLKSGS*LMGPTA
Trigger: TGCTGTTGGTCCCATTAAGCAACTACCAGATTTTAA...TAGATTGTGTTGTAGTGTGGTGTTCTCTTCGTCACATCTGCTAAAATCTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CCA 90 bp AATTGTCCGTCCAAGTGCAGTATTTTGATAAGCTGTGGCATGAAGATAATCAAAACATTCAGAACAACTTaGGTAGCAGCCTGTGTACTT +
Preference number: 4 (lower is better)
Translates to: NCPSKCSILISCGMKIIKTFRTT*VAACVL
Trigger: AAGTACACAGGCTGCTACCCAAGTTGTTCTGAATGT...TTTGATTATCTTCATGCCACAGCTTATCAAAATACTGCACTTGGACGGACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CCA 90 bp TGTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATAATTTCTACAGCTCTTaGCAAGTCTTTAGAGAATGC +
Preference number: 4 (lower is better)
Translates to: CSMSATVDDSQTIYSPHNNFYSS*QVFREC
Trigger: GCATTCTCTAAAGACTTGCCAAGAGCTGTAGAAATT...ATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CCA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGCATGTCTGCAACAGTaGATGATTCACAAACCATAT +
Preference number: 4 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMACLQQ*MIHKPY
Trigger: ATATGGTTTGTGAATCATCCACTGTTGCAGACATGC...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CCA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGATTTTCAGAAGATTTCTaGCTCGTGCAACCTCACTTT +
Preference number: 4 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGFSEDF*LVQPHF
Trigger: AAAGTGAGGTTGCACGAGCCAGAAATCTTCTGAAAA...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428154.5
ENST00000453466.1
CDS-3UTR CCA 90 bp AAGGAGTTTATTCTCCTGCACCTTTATCTCCACAAAATACAACAGGTATTAGCACACAATAGCAGTTATTaGAAGTGTTCAGCATCGGCT +
Preference number: 4 (lower is better)
Translates to: KEFILLHLYLHKIQQVLAHNSSY*KCSASA
Trigger: AGCCGATGCTGAACACTTCCAATAACTGCTATTGTG...TGCTAATACCTGTTGTATTTTGTGGAGATAAAGGTGCAGGAGAATAAACTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CCA 90 bp AGCAGCAGCAAGCACTATTCTTGGCCCCTTATAATGTGTGGTTATATAATCCACTTCCTCATAGGATCATaGAGAAGATTAACTGGTAAA +
Preference number: 4 (lower is better)
Translates to: SSSKHYSWPLIMCGYIIHFLIGS*RRLTGK
Trigger: TTTACCAGTTAATCTTCTCCATGATCCTATGAGGAA...GTGGATTATATAACCACACATTATAAGGGGCCAAGAATAGTGCTTGCTGCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444457.5
3UTR CAA 72 bp AATGGGCACTTAGCGAATACTTGTGGACCACAAGACTaGTCTGAGAACATGTTCAAAGACAGTTTTCAAATA +
Preference number: 4 (lower is better)
Translates to: NGHLANTCGPQD*SENMFKDSFQI
Trigger: TATTTGAAAACTGTCTTTGAACATGTTCTCAGACAAGTCTTGTGGTCCACAAGTATTCGCTAAGTGCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR TCA 90 bp CTTTTTGAACAACATGTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATGAAGTGTTGAAAGACTaGAAGCTATGGCAAAGATTG +
Preference number: 4 (lower is better)
Translates to: LFEQHVACLQQWMIHKPYEVLKD*KLWQRL
Trigger: CAATCTTTGCCATAGCTTTCAGTCTTTCAACACTTC...ATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACATGTTGTTCAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR TCA 90 bp CCAATGTGCTGTTTTGTATTATATCAGCAAGAATTTCTACAGCTCTTGGCAAGTTGGGACCATTCTTTTTaGACAACATGTAGCATGTCT +
Preference number: 4 (lower is better)
Translates to: PMCCFVLYQQEFLQLLASWDHSF*TTCSMS
Trigger: AGACATGCTACATGTTGTTCAAAAAGAATGGTCCCA...ACTTGCCAAGAGCTGTAGAAATTCTTGCTGATATAATACAAAACAGCACATTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443722.5
CDS-3UTR GCA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGATTGGTTTCAACTTCCTaGATCTCTCTAAGGATTACT +
Preference number: 4 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGLVSTS*ISLRIT
Trigger: AGTAATCCTTAGAGAGATGCAGGAAGTTGAAACCAA...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR GCA 90 bp TCACGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAAATTGTCCGTCCAAGTaGAGTATTTTGATAAGCTGT +
Preference number: 4 (lower is better)
Translates to: SRSQHMLLRICLKSGSCLNCPSK*SILISC
Trigger: ACAGCTTATCAAAATACTGCACTTGGACGGACAATT...TAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR GCA 90 bp TCACGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTATTTCTCCTTTGTGTGTaGATAAAGAGTCACCGAAAT +
Preference number: 4 (lower is better)
Translates to: SRSQHMLLRICLKSGSCLFLLCV*IKSHRN
Trigger: ATTTCGGTGACTCTTTATGCACACACAAAGGAGAAA...TAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR GCA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGTTGAACCATCAAGCTaGAACAACATGTTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMVEPSS*NNMFVF
Trigger: GAAAACAAACATGTTGTTGCAGCTTGATGGTTCAAC...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428154.5
ENST00000453466.1
CDS-3UTR CCA 90 bp TGTAAAACAAGAATGATTTCCAGGGTTTCTATCCAGCAAAAGTTTAACTGTGAGACATTCAGAACAACTTaGGTAGCAGCCTGTGTACTT +
Preference number: 4 (lower is better)
Translates to: CKTRMISRVSIQQKFNCETFRTT*VAACVL
Trigger: AAGTACACAGGCTGCTACCCAAGTTGTTCTGAATGT...CTCACAGTTAAACTTTTGCTGGATAGAAACCCTGGAAATCATTCTTGTTTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CCA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGAAATTTCTACAGCTCTTaGCAAGTCTTTAGAGAATGC +
Preference number: 4 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGNFYSS*QVFREC
Trigger: GCATTCTCTAAAGACTTGCCAAGAGCTGTAGAAATT...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CCA 90 bp GCTTCTCCCAATGTGCTGTTTTGTATTATATCAGCAAGAATTTCTACAGCTCTTTTTTCAGAAGATTTCTaGCTCGTGCAACCTCACTTT +
Preference number: 4 (lower is better)
Translates to: ASPNVLFCIISARISTALFSEDF*LVQPHF
Trigger: AAAGTGAGGTTGCACGAGCCAGAAATCTTCTGAAAA...AAGAGCTGTAGAAATTCTTGCTGATATAATACAAAACAGCACATTGGGAGAAGC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CCA 90 bp ATAGATTTGATATTTTCAGTTGGTCCCAAAATTGTCCGTCCAAGTGCAGTATTTCTTCAAGCTCAGGGATaGGAATCCTTCTATTATAGC +
Preference number: 4 (lower is better)
Translates to: IDLIFSVGPKIVRPSAVFLQAQG*ESFYYS
Trigger: GCTATAATAGAAGGATTCCCATCCCTGAGCTTGAAG...AAATACTGCACTTGGACGGACAATTTTGGGACCAACTGAAAATATCAAATCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CCA 90 bp TGTAAAACAAGAATGATTTCCAGGGTTTCTATCCAGCAAAAGTTTAACTGTGAGCATCCCAGATTGAAATaGGCACTTAGCGAATACTTG +
Preference number: 4 (lower is better)
Translates to: CKTRMISRVSIQQKFNCEHPRLK*ALSEYL
Trigger: CAAGTATTCGCTAAGTGCCCATTTCAATCTGGGATG...CTCACAGTTAAACTTTTGCTGGATAGAAACCCTGGAAATCATTCTTGTTTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR GCA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGCAAGTCTTTAGAGAATaGTTTGGCATAGTATACAGT +
Preference number: 4 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMQVFRE*FGIVYS
Trigger: ACTGTATACTATGCCAAAGCATTCTCTAAAGACTTG...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR GCA 90 bp CTCCCAATGTGCTGTTTTGTATTATATCAGCAAGAATTTCTACAGCTCTTGGCACAAGTCTTTAGAGAATaGTTTGGCATAGTATACAGT +
Preference number: 4 (lower is better)
Translates to: LPMCCFVLYQQEFLQLLAQVFRE*FGIVYS
Trigger: ACTGTATACTATGCCAAAGCATTCTCTAAAGACTTG...TGCCAAGAGCTGTAGAAATTCTTGCTGATATAATACAAAACAGCACATTGGGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp CTTTTTGAACAACATGTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATAATTGTCCGTCCAAGTaGAGTATTTTGATAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LFEQHVACLQQWMIHKPYNCPSK*SILISC
Trigger: ACAGCTTATCAAAATACTGCACTTGGACGGACAATT...ATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACATGTTGTTCAAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGTTAAAATCTGGTAGTTaGTTAATGGGACCTAAGGAT +
Preference number: 4 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMLKSGS*LMGPKD
Trigger: ATCCTTAGGTCCCATTAAGCAACTACCAGATTTTAA...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428154.5
CDS-3UTR CCA 90 bp ATAGATTTGATATTTTCAGTTGGTCCCAAAATTGTCCGTCCAAGTGCAGTATTTGCATGTCTGCAACAGTaGATGATTCACAAACCATAT +
Preference number: 4 (lower is better)
Translates to: IDLIFSVGPKIVRPSAVFACLQQ*MIHKPY
Trigger: ATATGGTTTGTGAATCATCCACTGTTGCAGACATGC...AAATACTGCACTTGGACGGACAATTTTGGGACCAACTGAAAATATCAAATCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR GCA 90 bp AATTGTCCGTCCAAGTGCAGTATTTTGATAAGCTGTGGCATGAAGATAATCAAACAAGTCTTTAGAGAATaGTTTGGCATAGTATACAGT +
Preference number: 4 (lower is better)
Translates to: NCPSKCSILISCGMKIIKQVFRE*FGIVYS
Trigger: ACTGTATACTATGCCAAAGCATTCTCTAAAGACTTG...TTTGATTATCTTCATGCCACAGCTTATCAAAATACTGCACTTGGACGGACAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS GCA 90 bp GCCCCAGGCCGCCTGGCGCCCGGCGGGTCCGGGTCGAGGAGGCCCTaGCCGACCCACTGTTCGGATCTGTGGCGCCGACTCTCAGGTGCG +
Preference number: 5 (lower is better)
Translates to: APGRLAPGGSGSRRP*PTHCSDLWRRLSGA
Trigger: CGCACCTGAGAGTCGGCGCCACAGATCCGAACAGTGGGTCGGGCAGGGCCTCCTCGACCCGGACCCGCCGGGCGCCAGGCGGCCTGGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS CCA 90 bp GGGTCCGGGTCGAGGAGGCCCTGCCCGACCCACTGTTCGGATCTGTaGCGCCGACTCTCAGGTGCGCTGCGCCGGGTCTGGCGAGATCTC +
Preference number: 5 (lower is better)
Translates to: GSGSRRPCPTHCSDL*RRLSGALRRVWRDL
Trigger: GAGATCTCGCCAGACCCGGCGCAGCGCACCTGAGAGTCGGCGCCACAGATCCGAACAGTGGGTCGGGCAGGGCCTCCTCGACCCGGACCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS GCA 90 bp GCCCGACCCACTGTTCGGATCTGTGGCGCCGACTCTCAGGTGCGCTaGGCCGGGTCTGGCGAGATCTCGAGGACAGGACCGGCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: ARPTVRICGADSQVR*AGSGEISRTGPAWR
Trigger: CCTCCAGGCCGGTCCTGTCCTCGAGATCTCGCCAGACCCGGCGCAGCGCACCTGAGAGTCGGCGCCACAGATCCGAACAGTGGGTCGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS GCA 90 bp GCCCTGCCCGACCCACTGTTCGGATCTGTGGCGCCGACTCTCAGGTaGGCTGCGCCGGGTCTGGCGAGATCTCGAGGACAGGACCGGCCT +
Preference number: 5 (lower is better)
Translates to: ALPDPLFGSVAPTLR*AAPGLARSRGQDRP
Trigger: AGGCCGGTCCTGTCCTCGAGATCTCGCCAGACCCGGCGCAGCGCACCTGAGAGTCGGCGCCACAGATCCGAACAGTGGGTCGGGCAGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS CCA 90 bp TGTTCGGATCTGTGGCGCCGACTCTCAGGTGCGCTGCGCCGGGTCTaGCGAGATCTCGAGGACAGGACCGGCCTGGAGGGAAGCTCACCC +
Preference number: 5 (lower is better)
Translates to: CSDLWRRLSGALRRV*RDLEDRTGLEGSSP
Trigger: GGGTGAGCTTCCCTCCAGGCCGGTCCTGTCCTCGAGATCTCGCCAGACCCGGCGCAGCGCACCTGAGAGTCGGCGCCACAGATCCGAACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS CCA 90 bp GCAAGCACTACGTTTTTAGTGGTCAAACATGCACTCCTCAGTAGCTaGCGGGAGGAGCCGAAAACCAGGGTCATCCCACACGTCACTAGC +
Preference number: 5 (lower is better)
Translates to: ASTTFLVVKHALLSS*REEPKTRVIPHVTS
Trigger: GCTAGTGACGTGTGGGATGACCCTGGTTTTCGGCTCCTCCCGCCAGCTACTGAGGAGTGCATGTTTGACCACTAAAAACGTAGTGCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR CAA 90 bp AGGAGAGGTGACCCTGTGAAGGCAAGAGTGACTGGCAGTAGTGCTATGTGGGTAGTCCAACTGTGCATGTaGAGAGCCCAGAGTCTTCCG +
Preference number: 5 (lower is better)
Translates to: RRGDPVKARVTGSSAMWVVQLCM*RAQSLP
Trigger: CGGAAGACTCTGGGCTCTCAACATGCACAGTTGGAC...TACCCACATAGCACTACTGCCAGTCACTCTTGCCTTCACAGGGTCACCTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp CTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCAGTCCAACTGTGCATGTaGAGAGCCCAGAGTCTTCCG +
Preference number: 5 (lower is better)
Translates to: LDVPNQQLQQLLQGAPKAVQLCM*RAQSLP
Trigger: CGGAAGACTCTGGGCTCTCAACATGCACAGTTGGAC...TGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CAA 90 bp GGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCTGCGCCAAAGGCATCTaGTCATCCCTCACACGAATC +
Preference number: 5 (lower is better)
Translates to: GCAQPTASTAIARCAKGICAKGI*SSLTRI
Trigger: GATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCA...GATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS GCA 90 bp GTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTaGGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VSGCAQPTASTAIAR*AKGILSSLTRISSS
Trigger: GCTGCTGGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456433.5
CDS-3UTR CAA 90 bp AGGAGAGGTGACCCTGTGAAGGCAAGAGTGACTGGCAGTAGTGCTATGTGGGTACAGTTGGTCCCAAAATaGTCCGTCCAAGTGCAGTAT +
Preference number: 5 (lower is better)
Translates to: RRGDPVKARVTGSSAMWVQLVPK*SVQVQY
Trigger: ATACTGCACTTGGACGGACAATTTTGGGACCAACTG...TACCCACATAGCACTACTGCCAGTCACTCTTGCCTTCACAGGGTCACCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp CTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCACAGCAAGCACTATTCTaGGCCCCTTATAATGTGTGG +
Preference number: 5 (lower is better)
Translates to: LDVPNQQLQQLLQGAPKAQQALF*APYNVW
Trigger: CCACACATTATAAGGGGCCAAGAATAGTGCTTGCTG...TGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CAA 90 bp TATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGTCACTTCCTGTGAATTaGCAGGGAGGCAGAGCTGGT +
Preference number: 5 (lower is better)
Translates to: YLDVPNQQLQQLLQGAPKSLPVN*QGGRAG
Trigger: ACCAGCTCTGCCTCCCTGCAAATTCACAGGAAGTGA...CTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp ACAGCTATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCATGCGCCAAAGGCATCTaGTCATCCCTCACACGAATC +
Preference number: 5 (lower is better)
Translates to: TAIARCAKGILSSLTRISCAKGI*SSLTRI
Trigger: GATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCA...TGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CTATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCCAGCTTCAACAGCTATaGCAAGGTGCGCCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: LLQGAPKASCHPSHESHFQLQQL*QGAPKA
Trigger: TGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTG...GAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp GATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAGCTTCAACAGCTATaGCAAGGTGCGCCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: DCIWMCPTNSFNSYCKVRQLQQL*QGAPKA
Trigger: TGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTG...GCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CAA 90 bp AGTGTTGAAAGACTGAAAGCTATGGCAAAGATTGCCATGACAAGTGAGCTGGGCGTCCAACTGTGCATGTaGAGAGCCCAGAGTCTTCCG +
Preference number: 5 (lower is better)
Translates to: SVERLKAMAKIAMTSELGVQLCM*RAQSLP
Trigger: CGGAAGACTCTGGGCTCTCAACATGCACAGTTGGAC...GCCCAGCTCACTTGTCATGGCAATCTTTGCCATAGCTTTCAGTCTTTCAACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CAA 90 bp CCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCAACATTCAGAACAACTaGGGTAGCAGCCTGTGTACT +
Preference number: 5 (lower is better)
Translates to: PTASTAIARCAKGILSSLNIQNN*GSSLCT
Trigger: AGTACACAGGCTGCTACCCAAGTTGTTCTGAATGTT...GAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp AGATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCTCTTCTTGGTGCCCTaGAAAGCCATATGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: RLYLDVPNQQLQQLLQGALFLVP*KAICSR
Trigger: TCTGGAGCATATGGCTTTCAAGGGCACCAAGAAGAG...CGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000456433.5
CDS-3UTR CAA 90 bp TATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGAACTGGGATCTCTTCTaGGTGCCCTTGAAAGCCATA +
Preference number: 5 (lower is better)
Translates to: YLDVPNQQLQQLLQGAPKNWDLF*VPLKAI
Trigger: TATGGCTTTCAAGGGCACCAAGAAGAGATCCCAGTT...CTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000456433.5
CDS-3UTR CAA 90 bp CAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACAGCAAGCACTATTCTaGGCCCCTTATAATGTGTGG +
Preference number: 5 (lower is better)
Translates to: QQLQQLLQGAPKASCHPSQQALF*APYNVW
Trigger: CCACACATTATAAGGGGCCAAGAATAGTGCTTGCTG...TGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp AGGAGAGGTGACCCTGTGAAGGCAAGAGTGACTGGCAGTAGTGCTATGTGGGTAGCTGGTATTTCTCCTTaGTGTGTGCATAAAGAGTCA +
Preference number: 5 (lower is better)
Translates to: RRGDPVKARVTGSSAMWVAGISP*CVHKES
Trigger: TGACTCTTTATGCACACACAAAGGAGAAATACCAGC...TACCCACATAGCACTACTGCCAGTCACTCTTGCCTTCACAGGGTCACCTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp GGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCGCTGGTATTTCTCCTTaGTGTGTGCATAAAGAGTCA +
Preference number: 5 (lower is better)
Translates to: GCAQPTASTAIARCAKGIAGISP*CVHKES
Trigger: TGACTCTTTATGCACACACAAAGGAGAAATACCAGC...GATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp TCAATCTCAAGTTCCAGATCTAACTGGGATCTCTTCTTGGTGCCCTTGAAAGCCCAGCTTCAACAGCTATaGCAAGGTGCGCCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: SISSSRSNWDLFLVPLKAQLQQL*QGAPKA
Trigger: TGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTG...GGCTTTCAAGGGCACCAAGAAGAGATCCCAGTTAGATCTGGAACTTGAGATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR CAA 90 bp CTCTCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCAAAGAGCGATCCCAGTaGCCAATCAGCGTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: LSSTGTLGTWLNFARFVSKERSQ*PISVFA
Trigger: TGCAAACACGCTGATTGGCAACTGGGATCGCTCTTT...GGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp CCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGATGTGCAAAGAGCGATCCCAGTaGCCAATCAGCGTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: PVANQRVCNHETDCIWMCKERSQ*PISVFA
Trigger: TGCAAACACGCTGATTGGCAACTGGGATCGCTCTTT...GCACATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CAA 90 bp AGGAGAGGTGACCCTGTGAAGGCAAGAGTGACTGGCAGTAGTGCTATGTGGGTATGTGGACCACAAGACTaGTCTGAGAACATGTTCAAA +
Preference number: 5 (lower is better)
Translates to: RRGDPVKARVTGSSAMWVCGPQD*SENMFK
Trigger: TTTGAACATGTTCTCAGACAAGTCTTGTGGTCCACA...TACCCACATAGCACTACTGCCAGTCACTCTTGCCTTCACAGGGTCACCTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp AGGAGAGGTGACCCTGTGAAGGCAAGAGTGACTGGCAGTAGTGCTATGTGGGTAATTGTGGTTGTGTTTTaGAGTCCAAGAGTCCAACAG +
Preference number: 5 (lower is better)
Translates to: RRGDPVKARVTGSSAMWVIVVVF*SPRVQQ
Trigger: CTGTTGGACTCTTGGACTCAAAAACACAACCACAAT...TACCCACATAGCACTACTGCCAGTCACTCTTGCCTTCACAGGGTCACCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp GCAACCATGAGACAGATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTTCTTGGTGCCTTGCCTaGAAAGCCATATGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: ATMRQIVSGCAQPTASTASWCLA*KAICSR
Trigger: TCTGGAGCATATGGCTTTCAAGGCAAGGCACCAAGA...AGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCTGTCTCATGGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443722.5
CDS-3UTR CAA 90 bp CAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCAGGGATCTCTTTTGCCTaGAAAGCCATATGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: QQLQQLLQGAPKASCHPSGISFA*KAICSR
Trigger: TCTGGAGCATATGGCTTTCAAGGCAAAAGAGATCCC...TGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453466.1
CDS-3UTR CAA 90 bp CTGCATCTCTCTAAGGATTACTCCACGCTCACGTTCAATCTCTGCTTCTCCCAAAACTGGGATCTCTTCTaGGTGCCCTTGAAAGCCATA +
Preference number: 5 (lower is better)
Translates to: LHLSKDYSTLTFNLCFSQNWDLF*VPLKAI
Trigger: TATGGCTTTCAAGGGCACCAAGAAGAGATCCCAGTT...TTGGGAGAAGCAGAGATTGAACGTGAGCGTGGAGTAATCCTTAGAGAGATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR CAA 90 bp CAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGATGTGCCCAGTTGGTCCCAAAATaGTCCGTCCAAGTGCAGTAT +
Preference number: 5 (lower is better)
Translates to: QLPISVFATMRQIVSGCAQLVPK*SVQVQY
Trigger: ATACTGCACTTGGACGGACAATTTTGGGACCAACTG...GGCACATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CAA 90 bp CCGCAGTTTCTAGTAGTAGTCAGGCTACTGGTAGTATTAGTCTGTGTTGTCACTTGCGCCAAAGGCATCTaGTCATCCCTCACACGAATC +
Preference number: 5 (lower is better)
Translates to: PQFLVVVRLLVVLVCVVTCAKGI*SSLTRI
Trigger: GATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCA...AGTGACAACACAGACTAATACTACCAGTAGCCTGACTACTACTAGAAACTGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp AATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGATGTGCCCAACCAACAAAGAGCGATCCCAGTaGCCAATCAGCGTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: NQRVCNHETDCIWMCPTNKERSQ*PISVFA
Trigger: TGCAAACACGCTGATTGGCAACTGGGATCGCTCTTT...GTTGGTTGGGCACATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CAA 90 bp GTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCCTGTGAATTTGTGAGCTGGGCCAGCTaGCTAGATAAATTCATTCCT +
Preference number: 5 (lower is better)
Translates to: VRQRHLVIPHTNLTSCEFVSWAS*LDKFIP
Trigger: AGGAATGAATTTATCTAGCAAGCTGGCCCAGCTCAC...AAATTCACAGGAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp TGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCCTGTGAATTTGTCACAGCATCAATTCTaGCTTCAAGCTCAGGGATGG +
Preference number: 5 (lower is better)
Translates to: CAKGILSSLTRISLPVNLSQHQF*LQAQGW
Trigger: CCATCCCTGAGCTTGAAGCAAGAATTGATGCTGTGA...CAAATTCACAGGAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CTCTCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCTCCAGCACTGGTACCTaGGGCACTTGGCTTAATTTT +
Preference number: 5 (lower is better)
Translates to: LSSTGTLGTWLNFARFVSSSTGT*GTWLNF
Trigger: AAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGA...GGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp CTCCTTTGTGTGTGCATAAAGAGTCACCGAAATGAAACTTTGCTAAGTCAAGCAGTCCAACTGTGCATGTaGAGAGCCCAGAGTCTTCCG +
Preference number: 5 (lower is better)
Translates to: LLCVCIKSHRNETLLSQAVQLCM*RAQSLP
Trigger: CGGAAGACTCTGGGCTCTCAACATGCACAGTTGGAC...TGCTTGACTTAGCAAAGTTTCATTTCGGTGACTCTTTATGCACACACAAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp TTGCTAGATAAATTCATTCCTCCCCCAAAAGAGCGATCCCAGTTGCCAATCAGCCAGCAAGCACTATTCTaGGCCCCTTATAATGTGTGG +
Preference number: 5 (lower is better)
Translates to: LLDKFIPPPKERSQLPISQQALF*APYNVW
Trigger: CCACACATTATAAGGGGCCAAGAATAGTGCTTGCTG...GCTGATTGGCAACTGGGATCGCTCTTTTGGGGGAGGAATGAATTTATCTAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CAA 90 bp AGGAGAGGTGACCCTGTGAAGGCAAGAGTGACTGGCAGTAGTGCTATGTGGGTACACCGAAATGAAACTTaGCTAAGTCAAGCAATTCAT +
Preference number: 5 (lower is better)
Translates to: RRGDPVKARVTGSSAMWVHRNET*LSQAIH
Trigger: ATGAATTGCTTGACTTAGCAAAGTTTCATTTCGGTG...TACCCACATAGCACTACTGCCAGTCACTCTTGCCTTCACAGGGTCACCTCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp CTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCACACCGAAATGAAACTTaGCTAAGTCAAGCAATTCAT +
Preference number: 5 (lower is better)
Translates to: LDVPNQQLQQLLQGAPKAHRNET*LSQAIH
Trigger: ATGAATTGCTTGACTTAGCAAAGTTTCATTTCGGTG...TGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CACTTAGCGAATACTTGTGGACCACAAGACTTGTCTGAGAACATGTTCAAAGACTCACTTCCTGTGAATTaGCAGGGAGGCAGAGCTGGT +
Preference number: 5 (lower is better)
Translates to: HLANTCGPQDLSENMFKDSLPVN*QGGRAG
Trigger: ACCAGCTCTGCCTCCCTGCAAATTCACAGGAAGTGA...GTCTTTGAACATGTTCTCAGACAAGTCTTGTGGTCCACAAGTATTCGCTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp GCTGCAACAACATGTTTGTTTTCAGAAGATTTCTGGCTCGTGCAACCTCACTTTTCACTTCCTGTGAATTaGCAGGGAGGCAGAGCTGGT +
Preference number: 5 (lower is better)
Translates to: AATTCLFSEDFWLVQPHFSLPVN*QGGRAG
Trigger: ACCAGCTCTGCCTCCCTGCAAATTCACAGGAAGTGA...AAAGTGAGGTTGCACGAGCCAGAAATCTTCTGAAAACAAACATGTTGTTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CACTTAGCGAATACTTGTGGACCACAAGACTTGTCTGAGAACATGTTCAAAGACCAGCTTCAACAGCTATaGCAAGGTGCGCCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: HLANTCGPQDLSENMFKDQLQQL*QGAPKA
Trigger: TGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTG...GTCTTTGAACATGTTCTCAGACAAGTCTTGTGGTCCACAAGTATTCGCTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp AATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGATGTGCCCAACCAACAACATTCAGAACAACTaGGGTAGCAGCCTGTGTACT +
Preference number: 5 (lower is better)
Translates to: NQRVCNHETDCIWMCPTNNIQNN*GSSLCT
Trigger: AGTACACAGGCTGCTACCCAAGTTGTTCTGAATGTT...GTTGGTTGGGCACATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CAA 90 bp TCACGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAGTCCAACTGTGCATGTaGAGAGCCCAGAGTCTTCCG +
Preference number: 5 (lower is better)
Translates to: SRSQHMLLRICLKSGSCLVQLCM*RAQSLP
Trigger: CGGAAGACTCTGGGCTCTCAACATGCACAGTTGGAC...TAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CATTTTCGTATCTACTTCCAGCATCAATCCAGAGTCCAACTGTGCATGTTGAGACTCTTCTTGGTGCCCTaGAAAGCCATATGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: HFRIYFQHQSRVQLCMLRLFLVP*KAICSR
Trigger: TCTGGAGCATATGGCTTTCAAGGGCACCAAGAAGAG...TCTCAACATGCACAGTTGGACTCTGGATTGATGCTGGAAGTAGATACGAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR CAA 90 bp GCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATCCTGCAGTTGGTCCCAAAATaGTCCGTCCAAGTGCAGTAT +
Preference number: 5 (lower is better)
Translates to: ACLQQWMIHKPYTVPIILQLVPK*SVQVQY
Trigger: ATACTGCACTTGGACGGACAATTTTGGGACCAACTG...CAGGATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CAA 90 bp CCGCAGTTTCTAGTAGTAGTCAGGCTACTGGTAGTATTAGTCTGTGTTGTCACTCAGCAAGCACTATTCTaGGCCCCTTATAATGTGTGG +
Preference number: 5 (lower is better)
Translates to: PQFLVVVRLLVVLVCVVTQQALF*APYNVW
Trigger: CCACACATTATAAGGGGCCAAGAATAGTGCTTGCTG...AGTGACAACACAGACTAATACTACCAGTAGCCTGACTACTACTAGAAACTGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp AGATTGTATCTGGATGTGCCCAACCAACAGCTTCAACAGCTATTGCAAGGTGCGGCTGGTATTTCTCCTTaGTGTGTGCATAAAGAGTCA +
Preference number: 5 (lower is better)
Translates to: RLYLDVPNQQLQQLLQGAAGISP*CVHKES
Trigger: TGACTCTTTATGCACACACAAAGGAGAAATACCAGC...CGCACCTTGCAATAGCTGTTGAAGCTGTTGGTTGGGCACATCCAGATACAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp TGTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATTGCGCCAAAGGCATCTaGTCATCCCTCACACGAATC +
Preference number: 5 (lower is better)
Translates to: CSMSATVDDSQTIYSPHNCAKGI*SSLTRI
Trigger: GATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCA...ATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CAA 90 bp TCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATCCTGTATCTCAGCTTCAACAGCTATaGCAAGGTGCGCCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: SATVDDSQTIYSPHNPVSQLQQL*QGAPKA
Trigger: TGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTG...AGATACAGGATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CAA 90 bp CATGTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAAAAGAGCGATCCCAGTaGCCAATCAGCGTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: HVACLQQWMIHKPYTVPIKERSQ*PISVFA
Trigger: TGCAAACACGCTGATTGGCAACTGGGATCGCTCTTT...TATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CAA 90 bp GCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATCCTGGTGAGCTGGGCCAGCTaGCTAGATAAATTCATTCCT +
Preference number: 5 (lower is better)
Translates to: ACLQQWMIHKPYTVPIILVSWAS*LDKFIP
Trigger: AGGAATGAATTTATCTAGCAAGCTGGCCCAGCTCAC...CAGGATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CAA 90 bp CCCAAAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTACATACTTCTCGAATaGTCTCAGCATTCACAGCAT +
Preference number: 5 (lower is better)
Translates to: PKRAIPVANQRVCNHETDYILLE*SQHSQH
Trigger: ATGCTGTGAATGCTGAGACAATTCGAGAAGTATGTA...ATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CCGCAGTTTCTAGTAGTAGTCAGGCTACTGGTAGTATTAGTCTGTGTTGTCACTGCACTTAGCGAATACTaGTGGACCACAAGACTTGTC +
Preference number: 5 (lower is better)
Translates to: PQFLVVVRLLVVLVCVVTALSEY*WTTRLV
Trigger: GACAAGTCTTGTGGTCCACAAGTATTCGCTAAGTGC...AGTGACAACACAGACTAATACTACCAGTAGCCTGACTACTACTAGAAACTGCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp TCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCTTCGTGGGTATGACTCCTTaGCCTCTTTTATGGAAATGG +
Preference number: 5 (lower is better)
Translates to: SSTGTLGTWLNFARFVSFVGMTP*PLLWKW
Trigger: CCATTTCCATAAAAGAGGCAAAGGAGTCATACCCAC...GAAGGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp CTTTTTGAACAACATGTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATGTCCAACTGTGCATGTaGAGAGCCCAGAGTCTTCCG +
Preference number: 5 (lower is better)
Translates to: LFEQHVACLQQWMIHKPYVQLCM*RAQSLP
Trigger: CGGAAGACTCTGGGCTCTCAACATGCACAGTTGGAC...ATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACATGTTGTTCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CAA 90 bp CACTTAGCGAATACTTGTGGACCACAAGACTTGTCTGAGAACATGTTCAAAGACAACTGGGATCTCTTCTaGGTGCCCTTGAAAGCCATA +
Preference number: 5 (lower is better)
Translates to: HLANTCGPQDLSENMFKDNWDLF*VPLKAI
Trigger: TATGGCTTTCAAGGGCACCAAGAAGAGATCCCAGTT...GTCTTTGAACATGTTCTCAGACAAGTCTTGTGGTCCACAAGTATTCGCTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp GTAGGAAGTGTTGAAAGACTGAAAGCTATGGCAAAGATTGCCATGACAAGTGAGCAGTTGGTCCCAAAATaGTCCGTCCAAGTGCAGTAT +
Preference number: 5 (lower is better)
Translates to: VGSVERLKAMAKIAMTSEQLVPK*SVQVQY
Trigger: ATACTGCACTTGGACGGACAATTTTGGGACCAACTG...CTCACTTGTCATGGCAATCTTTGCCATAGCTTTCAGTCTTTCAACACTTCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CAA 90 bp TATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCTCACTTCCCACCGAAATGAAACTTaGCTAAGTCAAGCAATTCAT +
Preference number: 5 (lower is better)
Translates to: YCKVRQRHLVIPHTNLTSHRNET*LSQAIH
Trigger: ATGAATTGCTTGACTTAGCAAAGTTTCATTTCGGTG...GGAAGTGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGATCACTTCCTGTGAATTaGCAGGGAGGCAGAGCTGGT +
Preference number: 5 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGSLPVN*QGGRAG
Trigger: ACCAGCTCTGCCTCCCTGCAAATTCACAGGAAGTGA...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CAA 90 bp TCACGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTATGCGCCAAAGGCATCTaGTCATCCCTCACACGAATC +
Preference number: 5 (lower is better)
Translates to: SRSQHMLLRICLKSGSCLCAKGI*SSLTRI
Trigger: GATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCA...TAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGTGCGCCAAAGGCATCTaGTCATCCCTCACACGAATC +
Preference number: 5 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMCAKGI*SSLTRI
Trigger: GATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCA...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATCCTGTATCTGTGTAAAGAGCGATCCCAGTaGCCAATCAGCGTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: QQWMIHKPYTVPIILYLCKERSQ*PISVFA
Trigger: TGCAAACACGCTGATTGGCAACTGGGATCGCTCTTT...ACACAGATACAGGATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CAA 90 bp CACTTAGCGAATACTTGTGGACCACAAGACTTGTCTGAGAACATGTTCAAAGACGTGAGCTGGGCCAGCTaGCTAGATAAATTCATTCCT +
Preference number: 5 (lower is better)
Translates to: HLANTCGPQDLSENMFKDVSWAS*LDKFIP
Trigger: AGGAATGAATTTATCTAGCAAGCTGGCCCAGCTCAC...GTCTTTGAACATGTTCTCAGACAAGTCTTGTGGTCCACAAGTATTCGCTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp TGCAACCTCACTTTCTGTGACACTTGTACAGAGTCGCATCCATTCTTTTTGAACGTGAGCTGGGCCAGCTaGCTAGATAAATTCATTCCT +
Preference number: 5 (lower is better)
Translates to: CNLTFCDTCTESHPFFLNVSWAS*LDKFIP
Trigger: AGGAATGAATTTATCTAGCAAGCTGGCCCAGCTCAC...GTTCAAAAAGAATGGATGCGACTCTGTACAAGTGTCACAGAAAGTGAGGTTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp ATAAATTCATTCCTCCCCCAAAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCTTCACAAATTGGAGTaGAACCATCAAGCTGCAACA +
Preference number: 5 (lower is better)
Translates to: INSFLPQKSDPSCQSACLLHKLE*NHQAAT
Trigger: TGTTGCAGCTTGATGGTTCAACTCCAATTTGTGAAG...CAAACACGCTGATTGGCAACTGGGATCGCTCTTTTGGGGGAGGAATGAATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CAACAGCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACAATATCTTCACAAATaGGAGTTGAACCATCAAGCT +
Preference number: 5 (lower is better)
Translates to: QQLQQLLQGAPKASCHPSQYLHK*ELNHQA
Trigger: AGCTTGATGGTTCAACTCCAATTTGTGAAGATATTG...TGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp GTAGGAAGTGTTGAAAGACTGAAAGCTATGGCAAAGATTGCCATGACAAGTGAGAACATTCAGAACAACTaGGGTAGCAGCCTGTGTACT +
Preference number: 5 (lower is better)
Translates to: VGSVERLKAMAKIAMTSENIQNN*GSSLCT
Trigger: AGTACACAGGCTGCTACCCAAGTTGTTCTGAATGTT...CTCACTTGTCATGGCAATCTTTGCCATAGCTTTCAGTCTTTCAACACTTCCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CAA 90 bp CAGAAGATTTCTGGCTCGTGCAACCTCACTTTCTGTGACACTTGTACAGAGTCGAAGTGTGCTGTTCCATaGTTCTTCTCATTTTCGTAT +
Preference number: 5 (lower is better)
Translates to: QKISGSCNLTFCDTCTESKCAVP*FFSFSY
Trigger: ATACGAAAATGAGAAGAACAATGGAACAGCACACTT...CGACTCTGTACAAGTGTCACAGAAAGTGAGGTTGCACGAGCCAGAAATCTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp ATTTTTCTTAATCAGGTCCATATACAGACTTCACCCCTTGGACAACAGAAGAACCTCTTCTTGGTGCCCTaGAAAGCCATATGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: IFLNQVHIQTSPLGQQKNLFLVP*KAICSR
Trigger: TCTGGAGCATATGGCTTTCAAGGGCACCAAGAAGAG...GTTCTTCTGTTGTCCAAGGGGTGAAGTCTGTATATGGACCTGATTAAGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp TCACGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTACTCTTCTTGGTGCCCTaGAAAGCCATATGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: SRSQHMLLRICLKSGSCLLFLVP*KAICSR
Trigger: TCTGGAGCATATGGCTTTCAAGGGCACCAAGAAGAG...TAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428154.5
CDS-3UTR CAA 90 bp GAAACTTTGCTAAGTCAAGCAATTCATCATGGGAAACACCTCCAGCAGCAGCAATCCAAGTGCAGTATTTaGATAAGCTGTGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: ETLLSQAIHHGKHLQQQQSKCSI*ISCGMK
Trigger: CTTCATGCCACAGCTTATCAAAATACTGCACTTGGA...TTGCTGCTGCTGGAGGTGTTTCCCATGATGAATTGCTTGACTTAGCAAAGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp TGTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATCAGCAAGCACTATTCTaGGCCCCTTATAATGTGTGG +
Preference number: 5 (lower is better)
Translates to: CSMSATVDDSQTIYSPHNQQALF*APYNVW
Trigger: CCACACATTATAAGGGGCCAAGAATAGTGCTTGCTG...ATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CAA 90 bp CCAATGTGCTGTTTTGTATTATATCAGCAAGAATTTCTACAGCTCTTGGCAAGTTCACTTCCTGTGAATTaGCAGGGAGGCAGAGCTGGT +
Preference number: 5 (lower is better)
Translates to: PMCCFVLYQQEFLQLLASSLPVN*QGGRAG
Trigger: ACCAGCTCTGCCTCCCTGCAAATTCACAGGAAGTGA...ACTTGCCAAGAGCTGTAGAAATTCTTGCTGATATAATACAAAACAGCACATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGAAAAGAGCGATCCCAGTaGCCAATCAGCGTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGKERSQ*PISVFA
Trigger: TGCAAACACGCTGATTGGCAACTGGGATCGCTCTTT...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CAA 90 bp GCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATCCTGCTTCACAAATTGGAGTaGAACCATCAAGCTGCAACA +
Preference number: 5 (lower is better)
Translates to: ACLQQWMIHKPYTVPIILLHKLE*NHQAAT
Trigger: TGTTGCAGCTTGATGGTTCAACTCCAATTTGTGAAG...CAGGATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp TTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCTTGTCATCCCTCACACGAATCAATATCTTCACAAATaGGAGTTGAACCATCAAGCT +
Preference number: 5 (lower is better)
Translates to: FNSYCKVRQRHLVIPHTNQYLHK*ELNHQA
Trigger: AGCTTGATGGTTCAACTCCAATTTGTGAAGATATTG...ATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CTCTCCAGCACTGGTACCTTGGGCACTTGGCTTAATTTTGCTAGGTTTGTTTCCATTCTCTGCTTTGTTTaGAATAGGTGGTGGTTTTGT +
Preference number: 5 (lower is better)
Translates to: LSSTGTLGTWLNFARFVSILCFV*NRWWFC
Trigger: ACAAAACCACCACCTATTCAAAACAAAGCAGAGAAT...GGAAACAAACCTAGCAAAATTAAGCCAAGTGCCCAAGGTACCAGTGCTGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp ATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTATCTGGATGAAGTGTGCTGTTCCATaGTTCTTCTCATTTTCGTAT +
Preference number: 5 (lower is better)
Translates to: IPVANQRVCNHETDCIWMKCAVP*FFSFSY
Trigger: ATACGAAAATGAGAAGAACAATGGAACAGCACACTT...CATCCAGATACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
CDS-3UTR CAA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGAACTGGGATCTCTTCTaGGTGCCCTTGAAAGCCATA +
Preference number: 5 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMNWDLF*VPLKAI
Trigger: TATGGCTTTCAAGGGCACCAAGAAGAGATCCCAGTT...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428154.5
CDS-3UTR CAA 90 bp AAAGAGCGATCCCAGTTGCCAATCAGCGTGTTTGCAACCATGAGACAGATTGTAACAACTTCTTGTAAATaGGTTTCAACTTCCTGCATC +
Preference number: 5 (lower is better)
Translates to: KERSQLPISVFATMRQIVTTSCK*VSTSCI
Trigger: GATGCAGGAAGTTGAAACCAATTTACAAGAAGTTGT...TACAATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGCAGTTGGTCCCAAAATaGTCCGTCCAAGTGCAGTAT +
Preference number: 5 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMQLVPK*SVQVQY
Trigger: ATACTGCACTTGGACGGACAATTTTGGGACCAACTG...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGCAGCAAGCACTATTCTaGGCCCCTTATAATGTGTGG +
Preference number: 5 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMQQALF*APYNVW
Trigger: CCACACATTATAAGGGGCCAAGAATAGTGCTTGCTG...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CAA 90 bp GTTGAGAGCCCAGAGTCTTCCGAAGCTACTCTGAGTCCACTTTCTAAACATGTTCACCGAAATGAAACTTaGCTAAGTCAAGCAATTCAT +
Preference number: 5 (lower is better)
Translates to: VESPESSEATLSPLSKHVHRNET*LSQAIH
Trigger: ATGAATTGCTTGACTTAGCAAAGTTTCATTTCGGTG...AACATGTTTAGAAAGTGGACTCAGAGTAGCTTCGGAAGACTCTGGGCTCTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS-3UTR CAA 90 bp TTTCAGTTGGTCCCAAAATTGTCCGTCCAAGTGCAGTATTTTGATAAGCTGTGGGCTGGTATTTCTCCTTaGTGTGTGCATAAAGAGTCA +
Preference number: 5 (lower is better)
Translates to: FQLVPKLSVQVQYFDKLWAGISP*CVHKES
Trigger: TGACTCTTTATGCACACACAAAGGAGAAATACCAGC...CCACAGCTTATCAAAATACTGCACTTGGACGGACAATTTTGGGACCAACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGTGAGCTGGGCCAGCTaGCTAGATAAATTCATTCCT +
Preference number: 5 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMVSWAS*LDKFIP
Trigger: AGGAATGAATTTATCTAGCAAGCTGGCCCAGCTCAC...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CAA 90 bp ATTTTTCTTAATCAGGTCCATATACAGACTTCACCCCTTGGACAACAGAAGAACTCACAGCATCAATTCTaGCTTCAAGCTCAGGGATGG +
Preference number: 5 (lower is better)
Translates to: IFLNQVHIQTSPLGQQKNSQHQF*LQAQGW
Trigger: CCATCCCTGAGCTTGAAGCAAGAATTGATGCTGTGA...GTTCTTCTGTTGTCCAAGGGGTGAAGTCTGTATATGGACCTGATTAAGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGATCACAGCATCAATTCTaGCTTCAAGCTCAGGGATGG +
Preference number: 5 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGSQHQF*LQAQGW
Trigger: CCATCCCTGAGCTTGAAGCAAGAATTGATGCTGTGA...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428154.5
ENST00000453466.1
CDS-3UTR CAA 90 bp TCACGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTATCACAGCATCAATTCTaGCTTCAAGCTCAGGGATGG +
Preference number: 5 (lower is better)
Translates to: SRSQHMLLRICLKSGSCLSQHQF*LQAQGW
Trigger: CCATCCCTGAGCTTGAAGCAAGAATTGATGCTGTGA...TAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428154.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CCGCAGTTTCTAGTAGTAGTCAGGCTACTGGTAGTATTAGTCTGTGTTGTCACTTACATACTTCTCGAATaGTCTCAGCATTCACAGCAT +
Preference number: 5 (lower is better)
Translates to: PQFLVVVRLLVVLVCVVTYILLE*SQHSQH
Trigger: ATGCTGTGAATGCTGAGACAATTCGAGAAGTATGTA...AGTGACAACACAGACTAATACTACCAGTAGCCTGACTACTACTAGAAACTGCGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp CATGTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATATCCAAGTGCAGTATTTaGATAAGCTCTTGGCAAGTC +
Preference number: 5 (lower is better)
Translates to: HVACLQQWMIHKPYTVPISKCSI*ISSWQV
Trigger: GACTTGCCAAGAGCTTATCAAAATACTGCACTTGGA...TATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456433.5
CDS-3UTR CAA 90 bp ATTTTTCTTAATCAGGTCCATATACAGACTTCACCCCTTGGACAACAGAAGAACAACATTCAGAACAACTaGGGTAGCAGCCTGTGTACT +
Preference number: 5 (lower is better)
Translates to: IFLNQVHIQTSPLGQQKNNIQNN*GSSLCT
Trigger: AGTACACAGGCTGCTACCCAAGTTGTTCTGAATGTT...GTTCTTCTGTTGTCCAAGGGGTGAAGTCTGTATATGGACCTGATTAAGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp TCACGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAAACATTCAGAACAACTaGGGTAGCAGCCTGTGTACT +
Preference number: 5 (lower is better)
Translates to: SRSQHMLLRICLKSGSCLNIQNN*GSSLCT
Trigger: AGTACACAGGCTGCTACCCAAGTTGTTCTGAATGTT...TAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CTCCTTTGTGTGTGCATAAAGAGTCACCGAAATGAAACTTTGCTAAGTCAAGCATCCAAGTGCAGTATTTaGATAAGCTGTGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: LLCVCIKSHRNETLLSQASKCSI*ISCGMK
Trigger: CTTCATGCCACAGCTTATCAAAATACTGCACTTGGA...TGCTTGACTTAGCAAAGTTTCATTTCGGTGACTCTTTATGCACACACAAAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CCAATGTGCTGTTTTGTATTATATCAGCAAGAATTTCTACAGCTCTTGGCAAGTCAGTTGGTCCCAAAATaGTCCGTCCAAGTGCAGTAT +
Preference number: 5 (lower is better)
Translates to: PMCCFVLYQQEFLQLLASQLVPK*SVQVQY
Trigger: ATACTGCACTTGGACGGACAATTTTGGGACCAACTG...ACTTGCCAAGAGCTGTAGAAATTCTTGCTGATATAATACAAAACAGCACATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CCAATGTGCTGTTTTGTATTATATCAGCAAGAATTTCTACAGCTCTTGGCAAGTGTGAGCTGGGCCAGCTaGCTAGATAAATTCATTCCT +
Preference number: 5 (lower is better)
Translates to: PMCCFVLYQQEFLQLLASVSWAS*LDKFIP
Trigger: AGGAATGAATTTATCTAGCAAGCTGGCCCAGCTCAC...ACTTGCCAAGAGCTGTAGAAATTCTTGCTGATATAATACAAAACAGCACATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp GTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATCTACATACTTCTCGAATaGTCTCAGCATTCACAGCAT +
Preference number: 5 (lower is better)
Translates to: VACLQQWMIHKPYTVPIIYILLE*SQHSQH
Trigger: ATGCTGTGAATGCTGAGACAATTCGAGAAGTATGTA...GATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CACTTAGCGAATACTTGTGGACCACAAGACTTGTCTGAGAACATGTTCAAAGACAAGTGTGCTGTTCCATaGTTCTTCTCATTTTCGTAT +
Preference number: 5 (lower is better)
Translates to: HLANTCGPQDLSENMFKDKCAVP*FFSFSY
Trigger: ATACGAAAATGAGAAGAACAATGGAACAGCACACTT...GTCTTTGAACATGTTCTCAGACAAGTCTTGTGGTCCACAAGTATTCGCTAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp AGCAGCAGCAAGCACTATTCTTGGCCCCTTATAATGTGTGGTTATATAATCCACAAGTGTGCTGTTCCATaGTTCTTCTCATTTTCGTAT +
Preference number: 5 (lower is better)
Translates to: SSSKHYSWPLIMCGYIIHKCAVP*FFSFSY
Trigger: ATACGAAAATGAGAAGAACAATGGAACAGCACACTT...GTGGATTATATAACCACACATTATAAGGGGCCAAGAATAGTGCTTGCTGCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CACTTAGCGAATACTTGTGGACCACAAGACTTGTCTGAGAACATGTTCAAAGACACAACTTCTTGTAAATaGGTTTCAACTTCCTGCATC +
Preference number: 5 (lower is better)
Translates to: HLANTCGPQDLSENMFKDTTSCK*VSTSCI
Trigger: GATGCAGGAAGTTGAAACCAATTTACAAGAAGTTGT...GTCTTTGAACATGTTCTCAGACAAGTCTTGTGGTCCACAAGTATTCGCTAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGATCCAAGTGCAGTATTTaGATAAGCTGTGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGSKCSI*ISCGMK
Trigger: CTTCATGCCACAGCTTATCAAAATACTGCACTTGGA...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CAA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGAGCTGGTATTTCTCCTTaGTGTGTGCATAAAGAGTCA +
Preference number: 5 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGAGISP*CVHKES
Trigger: TGACTCTTTATGCACACACAAAGGAGAAATACCAGC...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CAA 90 bp ATTTTTCTTAATCAGGTCCATATACAGACTTCACCCCTTGGACAACAGAAGAACCTTCACAAATTGGAGTaGAACCATCAAGCTGCAACA +
Preference number: 5 (lower is better)
Translates to: IFLNQVHIQTSPLGQQKNLHKLE*NHQAAT
Trigger: TGTTGCAGCTTGATGGTTCAACTCCAATTTGTGAAG...GTTCTTCTGTTGTCCAAGGGGTGAAGTCTGTATATGGACCTGATTAAGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGCTTCACAAATTGGAGTaGAACCATCAAGCTGCAACA +
Preference number: 5 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMLHKLE*NHQAAT
Trigger: TGTTGCAGCTTGATGGTTCAACTCCAATTTGTGAAG...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428154.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CCTGCACCTTTATCTCCACAAAATACAACAGGTATTAGCACACTAGTCTCAGCTCAATATCTTCACAAATaGGAGTTGAACCATCAAGCT +
Preference number: 5 (lower is better)
Translates to: PAPLSPQNTTGISTLVSAQYLHK*ELNHQA
Trigger: AGCTTGATGGTTCAACTCCAATTTGTGAAGATATTG...AGCTGAGACTAGTGTGCTAATACCTGTTGTATTTTGTGGAGATAAAGGTGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp AAGGAGTTTATTCTCCTGCACCTTTATCTCCACAAAATACAACAGGTATTAGCAATGACACATCCCAGATaGAAATGGGCACTTAGCGAA +
Preference number: 5 (lower is better)
Translates to: KEFILLHLYLHKIQQVLAMTHPR*KWALSE
Trigger: TTCGCTAAGTGCCCATTTCAATCTGGGATGTGTCAT...TGCTAATACCTGTTGTATTTTGTGGAGATAAAGGTGCAGGAGAATAAACTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp CCTGCACCTTTATCTCCACAAAATACAACAGGTATTAGCACACTAGTCTCAGCTAATTGGGAAGGAACTTaGGTTTCTAGGCTTAACTTT +
Preference number: 5 (lower is better)
Translates to: PAPLSPQNTTGISTLVSANWEGT*VSRLNF
Trigger: AAAGTTAAGCCTAGAAACCAAAGTTCCTTCCCAATT...AGCTGAGACTAGTGTGCTAATACCTGTTGTATTTTGTGGAGATAAAGGTGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp CTCCTTTGTGTGTGCATAAAGAGTCACCGAAATGAAACTTTGCTAAGTCAAGCAAAGTGTGCTGTTCCATaGTTCTTCTCATTTTCGTAT +
Preference number: 5 (lower is better)
Translates to: LLCVCIKSHRNETLLSQAKCAVP*FFSFSY
Trigger: ATACGAAAATGAGAAGAACAATGGAACAGCACACTT...TGCTTGACTTAGCAAAGTTTCATTTCGGTGACTCTTTATGCACACACAAAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp TGTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATACAGTCCCCATAATACAACTTCTTGTAAATaGGTTTCAACTTCCTGCATC +
Preference number: 5 (lower is better)
Translates to: CSMSATVDDSQTIYSPHNTTSCK*VSTSCI
Trigger: GATGCAGGAAGTTGAAACCAATTTACAAGAAGTTGT...ATTATGGGGACTGTATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp AAGGAGTTTATTCTCCTGCACCTTTATCTCCACAAAATACAACAGGTATTAGCATCCAAGTGCAGTATTTaGATAAGCTGTGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: KEFILLHLYLHKIQQVLASKCSI*ISCGMK
Trigger: CTTCATGCCACAGCTTATCAAAATACTGCACTTGGA...TGCTAATACCTGTTGTATTTTGTGGAGATAAAGGTGCAGGAGAATAAACTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp CTTTTTGAACAACATGTAGCATGTCTGCAACAGTGGATGATTCACAAACCATATTCCAAGTGCAGTATTTaGATAAGCTGTGGCATGAAG +
Preference number: 5 (lower is better)
Translates to: LFEQHVACLQQWMIHKPYSKCSI*ISCGMK
Trigger: CTTCATGCCACAGCTTATCAAAATACTGCACTTGGA...ATATGGTTTGTGAATCATCCACTGTTGCAGACATGCTACATGTTGTTCAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
CDS-3UTR CAA 90 bp AGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGGGATACATACTTCTCGAATaGTCTCAGCATTCACAGCAT +
Preference number: 5 (lower is better)
Translates to: SQHMLLRICLKSGSCLMGYILLE*SQHSQH
Trigger: ATGCTGTGAATGCTGAGACAATTCGAGAAGTATGTA...TCCCATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428154.5
ENST00000453466.1
CDS-3UTR CAA 90 bp ATTTTTCTTAATCAGGTCCATATACAGACTTCACCCCTTGGACAACAGAAGAACGCACTTGGCTTAATTTaGCTAGGTTTGTTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: IFLNQVHIQTSPLGQQKNALGLI*LGLFPS
Trigger: TGAAGGAAACAAACCTAGCAAAATTAAGCCAAGTGC...GTTCTTCTGTTGTCCAAGGGGTGAAGTCTGTATATGGACCTGATTAAGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249269.9
CDS-3UTR CAA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGTACTTGGCCAACTTTTaGCATAGAAGAAAAGAAGCC +
Preference number: 5 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMYLANF*HRRKEA
Trigger: GGCTTCTTTTCTTCTATGCAAAAAGTTGGCCAAGTA...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428154.5
CDS-3UTR CAA 90 bp TCACGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAAAGTGTGCTGTTCCATaGTTCTTCTCATTTTCGTAT +
Preference number: 5 (lower is better)
Translates to: SRSQHMLLRICLKSGSCLKCAVP*FFSFSY
Trigger: ATACGAAAATGAGAAGAACAATGGAACAGCACACTT...TAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGACAACTTCTTGTAAATaGGTTTCAACTTCCTGCATC +
Preference number: 5 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMTTSCK*VSTSCI
Trigger: GATGCAGGAAGTTGAAACCAATTTACAAGAAGTTGT...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGCACCGAAATGAAACTTaGCTAAGTCAAGCAATTCAT +
Preference number: 5 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMHRNET*LSQAIH
Trigger: ATGAATTGCTTGACTTAGCAAAGTTTCATTTCGGTG...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000428154.5
ENST00000443722.5
ENST00000453466.1
CDS-3UTR CAA 90 bp CGAAGCCAACACATGTTACTGCGTATCTGTTTAAAATCTGGTAGTTGCTTAATGCAATATCTTCACAAATaGGAGTTGAACCATCAAGCT +
Preference number: 5 (lower is better)
Translates to: RSQHMLLRICLKSGSCLMQYLHK*ELNHQA
Trigger: AGCTTGATGGTTCAACTCCAATTTGTGAAGATATTG...CATTAAGCAACTACCAGATTTTAAACAGATACGCAGTAACATGTGTTGGCTTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428154.5
ENST00000453466.1
CDS-3UTR CAA 90 bp TCCTTACGACTTATAGATTTGATATTTTCAGTTGGTCCCAAAATTGTCCGTCCAAAATATAATGATTCATaGATGTCCAGGTTCGCGGGA +
Preference number: 5 (lower is better)
Translates to: SLRLIDLIFSVGPKIVRPKYNDS*MSRFAG
Trigger: TCCCGCGAACCTGGACATCAATGAATCATTATATTT...TGGACGGACAATTTTGGGACCAACTGAAAATATCAAATCTATAAGTCGTAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS TCA 72 bp CTCGCTGAAACCCCAGAGCCGCCGCCGCGCCGCGGATaGCAACACCACTCGAGCCGCCGCAGCCGCCATTTC +
Preference number: 6 (lower is better)
Translates to: LAETPEPPPRRG*QHHSSRRSRHF
Trigger: GAAATGGCGGCTGCGGCGGCTCGAGTGGTGTTGTCATCCGCGGCGCGGCGGCGGCTCTGGGGTTTCAGCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000249269.9
ENST00000428154.5
ENST00000443722.5
ENST00000444457.5
ENST00000453466.1
ENST00000456433.5
ENST00000498530.5
CDS CCA 72 bp GCCGGGTCTGGCGAGATCTCGAGGACAGGACCGGCCTaGAGGGAAGCTCACCCGTCCCGCAGCGCCTCGGAT +
Preference number: 6 (lower is better)
Translates to: AGSGEISRTGPA*REAHPSRSASD
Trigger: ATCCGAGGCGCTGCGGGACGGGTGAGCTTCCCTCCAGGCCGGTCCTGTCCTCGAGATCTCGCCAGACCCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS CCA 72 bp CTGTGGCGCCGACTCTCAGGTGCGCTGCGCCGGGTCTaGCGAGATCTCGAGGACAGGACCGGCCTGGAGGGA +
Preference number: 6 (lower is better)
Translates to: LWRRLSGALRRV*RDLEDRTGLEG
Trigger: TCCCTCCAGGCCGGTCCTGTCCTCGAGATCTCGCCAGACCCGGCGCAGCGCACCTGAGAGTCGGCGCCACAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS CCA 72 bp TCGAGGAGGCCCTGCCCGACCCACTGTTCGGATCTGTaGCGCCGACTCTCAGGTGCGCTGCGCCGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: SRRPCPTHCSDL*RRLSGALRRVW
Trigger: CCAGACCCGGCGCAGCGCACCTGAGAGTCGGCGCCACAGATCCGAACAGTGGGTCGGGCAGGGCCTCCTCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS GCA 72 bp ACTGTTCGGATCTGTGGCGCCGACTCTCAGGTGCGCTaGGCCGGGTCTGGCGAGATCTCGAGGACAGGACCG +
Preference number: 6 (lower is better)
Translates to: TVRICGADSQVR*AGSGEISRTGP
Trigger: CGGTCCTGTCCTCGAGATCTCGCCAGACCCGGCGCAGCGCACCTGAGAGTCGGCGCCACAGATCCGAACAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS GCA 72 bp GACCCACTGTTCGGATCTGTGGCGCCGACTCTCAGGTaGGCTGCGCCGGGTCTGGCGAGATCTCGAGGACAG +
Preference number: 6 (lower is better)
Translates to: DPLFGSVAPTLR*AAPGLARSRGQ
Trigger: CTGTCCTCGAGATCTCGCCAGACCCGGCGCAGCGCACCTGAGAGTCGGCGCCACAGATCCGAACAGTGGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS CCA 72 bp GTCATCCCACACGTCACTAGCAGGTCTCCTGGCGGGTaGCCACAAGCCAGTCACCCCCGGCCAGTTCAGCAG +
Preference number: 6 (lower is better)
Translates to: VIPHVTSRSPGG*PQASHPRPVQQ
Trigger: CTGCTGAACTGGCCGGGGGTGACTGGCTTGTGGCCACCCGCCAGGAGACCTGCTAGTGACGTGTGGGATGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS CCA 72 bp ACGTTTTTAGTGGTCAAACATGCACTCCTCAGTAGCTaGCGGGAGGAGCCGAAAACCAGGGTCATCCCACAC +
Preference number: 6 (lower is better)
Translates to: TFLVVKHALLSS*REEPKTRVIPH
Trigger: GTGTGGGATGACCCTGGTTTTCGGCTCCTCCCGCCAGCTACTGAGGAGTGCATGTTTGACCACTAAAAACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444457.5
CDS CAA 72 bp GCTTCAACAGCTATTGCAAGGTGCGCCAAAGGCATCTaGTCATCCCTCACACGAATCTCCAGCAGCAGCAAG +
Preference number: 6 (lower is better)
Translates to: ASTAIARCAKGI*SSLTRISSSSK
Trigger: CTTGCTGCTGCTGGAGATTCGTGTGAGGGATGACAAGATGCCTTTGGCGCACCTTGCAATAGCTGTTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456433.5
CDS CAA 72 bp TCACTTACCATTCCTCCCCCAAAAGAGCGATCCCAGTaGCCAATCAGCGTGTTTGCAACCATGAGACAGATT +
Preference number: 6 (lower is better)
Translates to: SLTIPPPKERSQ*PISVFATMRQI
Trigger: AATCTGTCTCATGGTTGCAAACACGCTGATTGGCAACTGGGATCGCTCTTTTGGGGGAGGAATGGTAAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498530.5
CDS CAA 90 bp CTTGTCATCCCTCACACGAATCTCCAGCAGCAGCAAGCACTATTCTaGGCCCCTTATAATGTGTGGTTATATAATCCACTAAGTCCTTAC +
Preference number: 6 (lower is better)
Translates to: LVIPHTNLQQQQALF*APYNVWLYNPLSPY
Trigger: GTAAGGACTTAGTGGATTATATAACCACACATTATAAGGGGCCAAGAATAGTGCTTGCTGCTGCTGGAGATTCGTGTGAGGGATGACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456433.5
CDS CAA 72 bp CCTCACACGAATCTCCAGCAGCAGCAAGCACTATTCTaGGCCCCTTATAATGTGTGGTTATATAATCCACTA +
Preference number: 6 (lower is better)
Translates to: PHTNLQQQQALF*APYNVWLYNPL
Trigger: TAGTGGATTATATAACCACACATTATAAGGGGCCAAGAATAGTGCTTGCTGCTGCTGGAGATTCGTGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456433.5
CDS CCA 72 bp TTCATGAGTCCTCATCTGTTGGAGTCTGATATGCTATaGGTTAAGTCAGTGGGTCATTCATTGGTTTCTGAA +
Preference number: 6 (lower is better)
Translates to: FMSPHLLESDML*VKSVGHSLVSE
Trigger: TTCAGAAACCAATGAATGACCCACTGACTTAACCCATAGCATATCAGACTCCAACAGATGAGGACTCATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469560.1
CDS TCA 72 bp CATTTTCAGAAATGCTATAAGCATCTTGAGACTTCATaGGTCCTCATCTGTTGGAGTCTGATATGCTATGGG +
Preference number: 6 (lower is better)
Translates to: HFQKCYKHLETS*VLICWSLICYG
Trigger: CCCATAGCATATCAGACTCCAACAGATGAGGACTCATGAAGTCTCAAGATGCTTATAGCATTTCTGAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469560.1
CDS GCA 72 bp AGTATTTTGATAAGCTCTTGGCAAGTCTTTAGAGAATaGTTTGGCATAGTATACAGTCTGCTCTCTGGAGGT +
Preference number: 6 (lower is better)
Translates to: SILISSWQVFRE*FGIVYSLLSGG
Trigger: ACCTCCAGAGAGCAGACTGTATACTATGCCAAAGCATTCTCTAAAGACTTGCCAAGAGCTTATCAAAATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456433.5