Pregenerated sensors for PMIS2 (Homo sapiens)
Ensembl gene IDs: ENSG00000283758Ensembl transcript IDs: ENST00000640449.2, ENST00000646476.1
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GTGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGAGGCGTCTGGGGTAGCTaGCGCGTTGGGAGCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VFGEWLGWGADPWVAMPRGVWGS*RVGSRL Trigger: CAGCCTGCTCCCAACGCGCCAGCTACCCCAGACGCC...TCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR CCA 90 bp | TGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACCTGGGGCACCTCAGCTaGGGCACCTGGACCACCTGT | + |
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Preference number: 4 (lower is better) Translates to: CLVSGSVGERTPGLLCLDLGHLS*GTWTTC Trigger: ACAGGTGGTCCAGGTGCCCCAGCTGAGGTGCCCCAG...GTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR CCA 90 bp | TTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACTTGGCTCTTGCGGCTCCTaGGGCACCTCAGCTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: FGEWLGWGADPWVAMPRLGSCGS*GTSAGA Trigger: TGCCCCAGCTGAGGTGCCCCAGGAGCCGCAAGAGCC...AAGTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR CCA 90 bp | GTGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGAGGTGAGTGGCTCGGTTaGGGAGCGGACCCCTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: VFGEWLGWGADPWVAMPRGEWLG*GADPWV Trigger: AACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACC...TCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR CCA 90 bp | TGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACGGTGAGTGGCTCGGTTaGGGAGCGGACCCCTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: CLVSGSVGERTPGLLCLDGEWLG*GADPWV Trigger: AACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACC...GTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR CCA 90 bp | TTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACTTCTGGGGCACCTCAGCTaGGGCACCTGGACCACCTGT | + |
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Preference number: 4 (lower is better) Translates to: FGEWLGWGADPWVAMPRLLGHLS*GTWTTC Trigger: ACAGGTGGTCCAGGTGCCCCAGCTGAGGTGCCCCAG...AAGTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR TCA 90 bp | GTGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGAGGACTCCGAGTGTCTTaGAAACGGAGCGCCAGACCC | + |
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Preference number: 4 (lower is better) Translates to: VFGEWLGWGADPWVAMPRGLRVS*KRSARP Trigger: GGGTCTGGCGCTCCGTTTTCAAGACACTCGGAGTCC...TCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR TCA 90 bp | TGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACGGACTCCGAGTGTCTTaGAAACGGAGCGCCAGACCC | + |
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Preference number: 4 (lower is better) Translates to: CLVSGSVGERTPGLLCLDGLRVS*KRSARP Trigger: GGGTCTGGCGCTCCGTTTTCAAGACACTCGGAGTCC...GTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR GCA 90 bp | TGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACGTCTGTGTAGGCTCTTaGGGCTCCTGGGGCACCTCA | + |
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Preference number: 4 (lower is better) Translates to: CLVSGSVGERTPGLLCLDVCVGS*GSWGTS Trigger: TGAGGTGCCCCAGGAGCCGCAAGAGCCTACACAGAC...GTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR GCA 90 bp | GTGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGAGTCTGTGTAGGCTCTTaGGGCTCCTGGGGCACCTCA | + |
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Preference number: 4 (lower is better) Translates to: VFGEWLGWGADPWVAMPRVCVGS*GSWGTS Trigger: TGAGGTGCCCCAGGAGCCGCAAGAGCCTACACAGAC...TCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR CCA 90 bp | GTGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGATGGGGAGCGGACCCCTaGGTTGCTATGCCTAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: VFGEWLGWGADPWVAMPRWGADP*VAMPRL Trigger: AAGTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCA...TCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR TCA 90 bp | TGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACGTGGTTTCAGGGCCATaGCCTTTCCCCTCAAAGACG | + |
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Preference number: 4 (lower is better) Translates to: CLVSGSVGERTPGLLCLDVVSGP*PFPSKT Trigger: CGTCTTTGAGGGGAAAGGTCATGGCCCTGAAACCAC...GTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR CCA 90 bp | TTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACTTCCTGGGTGGCAGAAGGTaGTTTCAGGGCCATGACCTT | + |
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Preference number: 4 (lower is better) Translates to: LVSGSVGERTPGLLCLDFLGGRR*FQGHDL Trigger: AAGGTCATGGCCCTGAAACCACCTTCTGCCACCCAG...GAAGTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR CCA 90 bp | TTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACTTTGGGGAGCGGACCCCTaGGTTGCTATGCCTAGACTT | + |
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Preference number: 4 (lower is better) Translates to: FGEWLGWGADPWVAMPRLWGADP*VAMPRL Trigger: AAGTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCA...AAGTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR CCA 90 bp | TGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACTTAGTGTTTGGTGAGTaGCTCGGTTGGGGAGCGGAC | + |
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Preference number: 4 (lower is better) Translates to: CLVSGSVGERTPGLLCLDLVFGE*LGWGAD Trigger: GTCCGCTCCCCAACCGAGCCACTCACCAAACACTAA...GTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000640449.2 |
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| CDS-3UTR TCA 90 bp | TTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACTTGTGGTTTCAGGGCCATaGCCTTTCCCCTCAAAGACG | + |
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Preference number: 4 (lower is better) Translates to: FGEWLGWGADPWVAMPRLVVSGP*PFPSKT Trigger: CGTCTTTGAGGGGAAAGGTCATGGCCCTGAAACCAC...AAGTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR TCA 90 bp | GTGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACCAACCAGTTCGGCCTaGGTTGATGTAAGCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: VFGEWLGWGADPWVAMPRPTSSA*VDVSLF Trigger: GAAGAGGCTTACATCAACTCAGGCCGAACTGGTTGG...TCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR TCA 90 bp | TTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACTTCCAACCAGTTCGGCCTaGGTTGATGTAAGCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: FGEWLGWGADPWVAMPRLPTSSA*VDVSLF Trigger: GAAGAGGCTTACATCAACTCAGGCCGAACTGGTTGG...AAGTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR TCA 90 bp | TTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACTTCAGTTCGGCCTGAGTTaGTGTAAGCCTCTTCCCATT | + |
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Preference number: 4 (lower is better) Translates to: FGEWLGWGADPWVAMPRLQFGLS*CKPLPI Trigger: AATGGGAAGAGGCTTACATCAACTCAGGCCGAACTG...AAGTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR TCA 90 bp | GTGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGATTCTTGCCTGATGGCTaGCTTGGCTGGTTAGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: VFGEWLGWGADPWVAMPRFLPDG*LGWLVF Trigger: AAACACTAACCAGCCAAGTCAGCCATCAGGCAAGAA...TCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640449.2 |
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| CDS-3UTR TCA 90 bp | TGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACGTTGAATTTCTTGCCTaGTGGCTGACTTGGCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: CLVSGSVGERTPGLLCLDVEFLA*WLTWLV Trigger: AACCAGCCAAGTCAGCCATCAGGCAAGAAATTCAAC...GTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640449.2 |
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| CDS-3UTR TCA 90 bp | TTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACTTCAGATGTCTCAGCGGTTaGATTTCTTGCCTGATGGCT | + |
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Preference number: 4 (lower is better) Translates to: LVSGSVGERTPGLLCLDFRCLSG*ISCLMA Trigger: AGCCATCAGGCAAGAAATTCAACCGCTGAGACATCT...GAAGTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640449.2 |
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| CDS-3UTR CCA 90 bp | TTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACTTCTCCCATTCACTGTTCTaGTTGGCCTTCATAGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: LVSGSVGERTPGLLCLDFSHSLF*LAFIVC Trigger: ACAGACTATGAAGGCCAACCAGAACAGTGAATGGGA...GAAGTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640449.2 |
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| CDS-3UTR CCA 90 bp | TGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACTCCCATTCACTGTTCTaGTTGGCCTTCATAGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: CLVSGSVGERTPGLLCLDSHSLF*LAFIVS Trigger: TGAGACTATGAAGGCCAACCAGAACAGTGAATGGGA...GTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000646476.1 |
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| CDS-3UTR TCA 90 bp | GTGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGAGGACCAAGCCATAAATaGTGCCTAAGCCAATCATTA | + |
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Preference number: 4 (lower is better) Translates to: VFGEWLGWGADPWVAMPRGPSHK*CLSQSL Trigger: TAATGATTGGCTTAGGCATCATTTATGGCTTGGTCC...TCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR GCA 90 bp | TGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACAGAGAAGTACAAAGCTaGCAATCCAAATGGAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: CLVSGSVGERTPGLLCLDREVQS*QSKWRE Trigger: TTCCCTCCATTTGGATTGGCAGCTTTGTACTTCTCT...GTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR GCA 90 bp | GTGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGAAGAGAAGTACAAAGCTaGCAATCCAAATGGAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: VFGEWLGWGADPWVAMPRREVQS*QSKWRE Trigger: TTCCCTCCATTTGGATTGGCAGCTTTGTACTTCTCT...TCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR GCA 90 bp | TTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACTTAATCATTACCACGAATaGACCGAACCAACCAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: FGEWLGWGADPWVAMPRLNHYHE*TEPTSS Trigger: CGAACTGGTTGGTTCGGTGCATTCGTGGTAATGATT...AAGTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR TCA 90 bp | TTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACTTGGACCAAGCCATAAATaGTGCCTAAGCCAATCATTA | + |
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Preference number: 4 (lower is better) Translates to: FGEWLGWGADPWVAMPRLGPSHK*CLSQSL Trigger: TAATGATTGGCTTAGGCATCATTTATGGCTTGGTCC...AAGTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR GCA 90 bp | TTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACTTCACCCCTGGGTTGCTATaGCTAGACTTCATTAATATA | + |
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Preference number: 4 (lower is better) Translates to: LVSGSVGERTPGLLCLDFTPGLL*LDFINI Trigger: TATATTAATGAAGTCTAGGCATAGCAACCCAGGGGT...GAAGTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR GCA 90 bp | GTGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGAACCCCTGGGTTGCTATaGCTAGACTTCATTAATATA | + |
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Preference number: 4 (lower is better) Translates to: VFGEWLGWGADPWVAMPRTPGLL*LDFINI Trigger: TATATTAATGAAGTCTAGGCATAGCAACCCAGGGGT...TCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS CCA 90 bp | CTCTGGTGTCTGTGTAGGCTCTTGCGGCTCCTGGGGCACCTCAGCTaGGGCACCTGGACCACCTGTGGTAGTGGGAGAACCTGGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: LWCLCRLLRLLGHLS*GTWTTCGSGRTWGS Trigger: GCTGCCCCAGGTTCTCCCACTACCACAGGTGGTCCAGGTGCCCCAGCTGAGGTGCCCCAGGAGCCGCAAGAGCCTACACAGACACCAGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR CAA 90 bp | TTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACTTCGGGGTAGCTGGCGCGTaGGGAGCAGGCTGGGTGGCA | + |
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Preference number: 5 (lower is better) Translates to: LVSGSVGERTPGLLCLDFGVAGA*GAGWVA Trigger: TGCCACCCAGCCTGCTCCCAACGCGCCAGCTACCCC...GAAGTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS CCA 90 bp | GTCTGGGGTAGCTGGCGCGTTGGGAGCAGGCTGGGTGGCAGAAGGTaGTTTCAGGGCCATGACCTTTCCCCTCAAAGACGGACTCCGAGT | + |
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Preference number: 5 (lower is better) Translates to: VWGSWRVGSRLGGRR*FQGHDLSPQRRTPS Trigger: ACTCGGAGTCCGTCTTTGAGGGGAAAGGTCATGGCCCTGAAACCACCTTCTGCCACCCAGCCTGCTCCCAACGCGCCAGCTACCCCAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR CAA 90 bp | GTGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGATGTCTGTGTAGGCTCTaGCGGCTCCTGGGGCACCTC | + |
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Preference number: 5 (lower is better) Translates to: VFGEWLGWGADPWVAMPRCLCRL*RLLGHL Trigger: GAGGTGCCCCAGGAGCCGCAAGAGCCTACACAGACA...TCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR CAA 90 bp | GTGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACGGACTCCGAGTGTCTaGAAAACGGAGCGCCAGACC | + |
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Preference number: 5 (lower is better) Translates to: VFGEWLGWGADPWVAMPRRTPSV*KTERQT Trigger: GGTCTGGCGCTCCGTTTTCAAGACACTCGGAGTCCG...TCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR CAA 90 bp | TTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACTTTGTCTGTGTAGGCTCTaGCGGCTCCTGGGGCACCTC | + |
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Preference number: 5 (lower is better) Translates to: FGEWLGWGADPWVAMPRLCLCRL*RLLGHL Trigger: GAGGTGCCCCAGGAGCCGCAAGAGCCTACACAGACA...AAGTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS TCA 90 bp | GCGCGTTGGGAGCAGGCTGGGTGGCAGAAGGTGGTTTCAGGGCCATaGCCTTTCCCCTCAAAGACGGACTCCGAGTGTCTTGAAAACGGA | + |
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Preference number: 5 (lower is better) Translates to: ARWEQAGWQKVVSGP*PFPSKTDSECLENG Trigger: TCCGTTTTCAAGACACTCGGAGTCCGTCTTTGAGGGGAAAGGTCATGGCCCTGAAACCACCTTCTGCCACCCAGCCTGCTCCCAACGCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR CAA 90 bp | GTGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGAGAGCGGACCCCTGGGTaGCTATGCCTAGACTTCATT | + |
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Preference number: 5 (lower is better) Translates to: VFGEWLGWGADPWVAMPRERTPG*LCLDFI Trigger: AATGAAGTCTAGGCATAGCAACCCAGGGGTCCGCTC...TCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS TCA 90 bp | TTCAGGGCCATGACCTTTCCCCTCAAAGACGGACTCCGAGTGTCTTaGAAACGGAGCGCCAGACCCACTAGGCTTCCCCTTGTACTAACC | + |
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Preference number: 5 (lower is better) Translates to: FRAMTFPLKDGLRVS*KRSARPTRLPLVLT Trigger: GGTTAGTACAAGGGGAAGCCTAGTGGGTCTGGCGCTCCGTTTTCAAGACACTCGGAGTCCGTCTTTGAGGGGAAAGGTCATGGCCCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS-3UTR CAA 90 bp | TTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACTTCCATTCACTGTTCTGGTaGGCCTTCATAGTCTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: LVSGSVGERTPGLLCLDFHSLFW*AFIVCR Trigger: CCTACAGACTATGAAGGCCAACCAGAACAGTGAATG...GAAGTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640449.2 |
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| CDS-3UTR CAA 90 bp | GTGTTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGATGGTTAGAGGATTTCTaGGCTAGATGTCTCAGCGGT | + |
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Preference number: 5 (lower is better) Translates to: VFGEWLGWGADPWVAMPRWLEDF*ARCLSG Trigger: ACCGCTGAGACATCTAGCCAAGAAATCCTCTAACCA...TCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000640449.2 |
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| CDS-3UTR CAA 90 bp | TTTGGTGAGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATGCCTAGACTTTCAAACATAGGTAGTTaGGGGCGTAAAATGCTAGTT | + |
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Preference number: 5 (lower is better) Translates to: FGEWLGWGADPWVAMPRLSNIGS*GRKMLV Trigger: AACTAGCATTTTACGCCCCAAACTACCTATGTTTGA...AAGTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACTCACCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS TCA 90 bp | GGGTTGCTATGCCTAGACTTCATTAATATAGGACCAAGCCATAAATaGTGCCTAAGCCAATCATTACCACGAATGCACCGAACCAACCAG | + |
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Preference number: 5 (lower is better) Translates to: GLLCLDFINIGPSHK*CLSQSLPRMHRTNQ Trigger: CTGGTTGGTTCGGTGCATTCGTGGTAATGATTGGCTTAGGCATCATTTATGGCTTGGTCCTATATTAATGAAGTCTAGGCATAGCAACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS CCA 72 bp | AGCTGGCGCGTTGGGAGCAGGCTGGGTGGCAGAAGGTaGTTTCAGGGCCATGACCTTTCCCCTCAAAGACGG | + |
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Preference number: 6 (lower is better) Translates to: SWRVGSRLGGRR*FQGHDLSPQRR Trigger: CCGTCTTTGAGGGGAAAGGTCATGGCCCTGAAACCACCTTCTGCCACCCAGCCTGCTCCCAACGCGCCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS TCA 72 bp | GAGCAGGCTGGGTGGCAGAAGGTGGTTTCAGGGCCATaGCCTTTCCCCTCAAAGACGGACTCCGAGTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: EQAGWQKVVSGP*PFPSKTDSECL Trigger: AAGACACTCGGAGTCCGTCTTTGAGGGGAAAGGTCATGGCCCTGAAACCACCTTCTGCCACCCAGCCTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS TCA 72 bp | ATGACCTTTCCCCTCAAAGACGGACTCCGAGTGTCTTaGAAACGGAGCGCCAGACCCACTAGGCTTCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: MTFPLKDGLRVS*KRSARPTRLPL Trigger: AAGGGGAAGCCTAGTGGGTCTGGCGCTCCGTTTTCAAGACACTCGGAGTCCGTCTTTGAGGGGAAAGGTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS GCA 72 bp | AGTGGCTCGGTTGGGGAGCGGACCCCTGGGTTGCTATaGCTAGACTTCATTAATATAGGACCAAGCCATAAA | + |
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Preference number: 6 (lower is better) Translates to: SGSVGERTPGLL*LDFINIGPSHK Trigger: TTTATGGCTTGGTCCTATATTAATGAAGTCTAGGCATAGCAACCCAGGGGTCCGCTCCCCAACCGAGCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS TCA 72 bp | CATTACCACGAATGCACCGAACCAACCAGTTCGGCCTaGGTTGATGTAAGCCTCTTCCCATTCACTGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: HYHECTEPTSSA*VDVSLFPFTVL Trigger: CAGAACAGTGAATGGGAAGAGGCTTACATCAACTCAGGCCGAACTGGTTGGTTCGGTGCATTCGTGGTAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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| CDS TCA 72 bp | TGCCTAGACTTCATTAATATAGGACCAAGCCATAAATaGTGCCTAAGCCAATCATTACCACGAATGCACCGA | + |
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Preference number: 6 (lower is better) Translates to: CLDFINIGPSHK*CLSQSLPRMHR Trigger: TCGGTGCATTCGTGGTAATGATTGGCTTAGGCATCATTTATGGCTTGGTCCTATATTAATGAAGTCTAGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000640449.2 ENST00000646476.1 |
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