RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PMFBP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000118557

Ensembl transcript IDs: ENST00000237353.15, ENST00000355636.10, ENST00000379073.9, ENST00000535461.5, ENST00000536211.5, ENST00000537392.1, ENST00000537465.5, ENST00000537792.5, ENST00000539172.5, ENST00000540440.1, ENST00000543746.1

Found 1016 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTGGAGTTCTTCCATGCAGGAGCACGGCATGGCGGGAGCGGGGCTaGAGAGTATCCGAGGTGCTGCCGGGGCAGCGGGAGGTGGCTGGA +
Preference number: 1 (lower is better)
Translates to: GGVLPCRSTAWRERG*RVSEVLPGQREVAG
Trigger: TCCAGCCACCTCCCGCTGCCCCGGCAGCACCTCGGATACTCTGCAGCCCCGCTCCCGCCATGCCGTGCTCCTGCATGGAAGAACTCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR CCA 90 bp CTCTCTGGCAGAGGAGGTGGAGTTCTTCCATGCAGGAGCACGGCATaGCGGGAGCGGGGCTGCAGAGTATCCGAGGTGCTGCCGGGGCAG +
Preference number: 1 (lower is better)
Translates to: LSGRGGGVLPCRSTA*RERGCRVSEVLPGQ
Trigger: CTGCCCCGGCAGCACCTCGGATACTCTGCAGCCCCGCTCCCGCCATGCCGTGCTCCTGCATGGAAGAACTCCACCTCCTCTGCCAGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR TCA 90 bp CTACGAAGATCTACACTCCAGGCCGGAAAGAGCAAGGGGAGCCCATaGCCCCTCGCCGCACGCCAGCCCGCTTTGGTCTGTGAGCTGAGG +
Preference number: 1 (lower is better)
Translates to: LRRSTLQAGKSKGSP*PLAARQPALVCELR
Trigger: CCTCAGCTCACAGACCAAAGCGGGCTGGCGTGCGGCGAGGGGTCATGGGCTCCCCTTGCTCTTTCCGGCCTGGAGTGTAGATCTTCGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR CCA 90 bp CAGGTGGCAGGAAAGGCGGCTGTGGACCCAGGCTGGGTAGGTGGCTaGGGTGCTCTTACGGGGTTTCCAGACGTAGAAGGAAGATGCCTC +
Preference number: 1 (lower is better)
Translates to: QVAGKAAVDPGWVGG*GALTGFPDVEGRCL
Trigger: GAGGCATCTTCCTTCTACGTCTGGAAACCCCGTAAGAGCACCCCAGCCACCTACCCAGCCTGGGTCCACAGCCGCCTTTCCTGCCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
3UTR CCA 90 bp GCAACCCCTTCCAGCCCAAGGTGCCGCACACTTTCTCCCTCTGTGTaGACTCCGTTCTGCTCGGGCCTAGGGCTTTGGTGCATAGCCTTG +
Preference number: 1 (lower is better)
Translates to: ATPSSPRCRTLSPSV*TPFCSGLGLWCIAL
Trigger: CAAGGCTATGCACCAAAGCCCTAGGCCCGAGCAGAACGGAGTCCACACAGAGGGAGAAAGTGTGCGGCACCTTGGGCTGGAAGGGGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CCA 90 bp GGCCGCATGGCCAGGCAGCTCTGCTGCAGGGTGACTTCTTGCCTCTaGGGTAACATGGAGTTTACAGGTGGCAGGAAAGGCGGCTGTGGA +
Preference number: 1 (lower is better)
Translates to: GRMARQLCCRVTSCL*GNMEFTGGRKGGCG
Trigger: TCCACAGCCGCCTTTCCTGCCACCTGTAAACTCCATGTTACCCCAGAGGCAAGAAGTCACCCTGCAGCAGAGCTGCCTGGCCATGCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537465.5
3UTR GCA 90 bp GAGACCCTTCTGCAGTTTCCTCTGGGTGTCCTCCAGGTGACAGCCTaGCAGTGCAGCCTCTTCTTTGCACTGGGCTGCTTGCTGAGCAGC +
Preference number: 1 (lower is better)
Translates to: ETLLQFPLGVLQVTA*QCSLFFALGCLLSS
Trigger: GCTGCTCAGCAAGCAGCCCAGTGCAAAGAAGAGGCTGCACTGGCAGGCTGTCACCTGGAGGACACCCAGAGGAAACTGCAGAAGGGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CCA 90 bp AGCCGGCACTGCAGGATGGTGATGTCCTTATCCTTCCTCTCAATGTaGGCAGATGTCTCCTCCCGCAGTCCGTGCAGGTCCAGCTCCAGC +
Preference number: 1 (lower is better)
Translates to: SRHCRMVMSLSFLSM*ADVSSRSPCRSSSS
Trigger: GCTGGAGCTGGACCTGCACGGACTGCGGGAGGAGACATCTGCCCACATTGAGAGGAAGGATAAGGACATCACCATCCTGCAGTGCCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CCA 90 bp AGCCTCTCCTGCTGCTTGGCCTCTTCGAGACTGTTCTTCAGCTTCTaGACCTCAGCCTGCAGGGCCTTGCACTCCGCCTCCTTGGACTTG +
Preference number: 1 (lower is better)
Translates to: SLSCCLASSRLFFSF*TSACRALHSASLDL
Trigger: CAAGTCCAAGGAGGCGGAGTGCAAGGCCCTGCAGGCTGAGGTCCAGAAGCTGAAGAACAGTCTCGAAGAGGCCAAGCAGCAGGAGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 90 bp TGCTTGGCCTCTTCGAGACTGTTCTTCAGCTTCTGGACCTCAGCCTaGAGGGCCTTGCACTCCGCCTCCTTGGACTTGTCCTGCTTAGCC +
Preference number: 1 (lower is better)
Translates to: CLASSRLFFSFWTSA*RALHSASLDLSCLA
Trigger: GGCTAAGCAGGACAAGTCCAAGGAGGCGGAGTGCAAGGCCCTGCAGGCTGAGGTCCAGAAGCTGAAGAACAGTCTCGAAGAGGCCAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 90 bp AGCCCAAGGTGCCGCACACTTTCTCCCTCTGTGTGGACTCCGTTCTaGTCGGGCCTAGGGCTTTGGTGCATAGCCTTGTGTTCTCGGCTT +
Preference number: 1 (lower is better)
Translates to: SPRCRTLSPSVWTPF*SGLGLWCIALCSRL
Trigger: AAGCCGAGAACACAAGGCTATGCACCAAAGCCCTAGGCCCGAGCAGAACGGAGTCCACACAGAGGGAGAAAGTGTGCGGCACCTTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 90 bp CGAGGTGATTCCTCAAGGGCTGGCCGCATGGCCAGGCAGCTCTGCTaGAGGGTGACTTCTTGCCTCTGGGGTAACATGGAGTTTACAGGT +
Preference number: 1 (lower is better)
Translates to: RGDSSRAGRMARQLC*RVTSCLWGNMEFTG
Trigger: ACCTGTAAACTCCATGTTACCCCAGAGGCAAGAAGTCACCCTGCAGCAGAGCTGCCTGGCCATGCGGCCAGCCCTTGAGGAATCACCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
3UTR GCA 90 bp GCCCTCCTGGCTGTGGGTGAGGGCACGGTGTTTCCTGATCTCTCCTaGTGTGTCTCCAGGTCTACGAAGATCTACACTCCAGGCCGGAAA +
Preference number: 1 (lower is better)
Translates to: ALLAVGEGTVFPDLS*CVSRSTKIYTPGRK
Trigger: TTTCCGGCCTGGAGTGTAGATCTTCGTAGACCTGGAGACACAGCAGGAGAGATCAGGAAACACCGTGCCCTCACCCACAGCCAGGAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR CCA 90 bp TCCGACACGGCCTCTAGTTCCACGCGCAGATCCTTCACCAGGTTCTaGTACTCCTCCACATGCAGGCACTGGCTGTCTTTCTGCTCCTGC +
Preference number: 1 (lower is better)
Translates to: SDTASSSTRRSFTRF*YSSTCRHWLSFCSC
Trigger: GCAGGAGCAGAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACTAGAGGCCGTGTCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 90 bp ACCTCAGCCTGCAGGGCCTTGCACTCCGCCTCCTTGGACTTGTCCTaGTTAGCCTCCTTGACTGTCATTTCAAGTTCTGTGGCCATGCAC +
Preference number: 1 (lower is better)
Translates to: TSACRALHSASLDLS*LASLTVISSSVAMH
Trigger: GTGCATGGCCACAGAACTTGAAATGACAGTCAAGGAGGCTAAGCAGGACAAGTCCAAGGAGGCGGAGTGCAAGGCCCTGCAGGCTGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CCA 90 bp TTGTTTTCCTGCTGCAAGTGGACCATTACACTGTGGAGGTGGCTGTaGGAAGGAGAGGAAGGACGGGTTGTGTTGGGGCTGCTGGCTCTG +
Preference number: 1 (lower is better)
Translates to: LFSCCKWTITLWRWL*EGEEGRVVLGLLAL
Trigger: CAGAGCCAGCAGCCCCAACACAACCCGTCCTTCCTCTCCTTCCCACAGCCACCTCCACAGTGTAATGGTCCACTTGCAGCAGGAAAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 90 bp AGCTGCTCCTCTTTGGCTGCCAGCATCTTGAGGTCATTCTGGTGTTaGTTCTGCCACTGCAGCACCTGGCAGCTCATCTCCTCTAGCTTC +
Preference number: 1 (lower is better)
Translates to: SCSSLAASILRSFWC*FCHCSTWQLISSSF
Trigger: GAAGCTAGAGGAGATGAGCTGCCAGGTGCTGCAGTGGCAGAAGCAACACCAGAATGACCTCAAGATGCTGGCAGCCAAAGAGGAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 90 bp AGTTCCACGCGCAGATCCTTCACCAGGTTCTGGTACTCCTCCACATaGAGGCACTGGCTGTCTTTCTGCTCCTGCAAGTGCTTCAGTATC +
Preference number: 1 (lower is better)
Translates to: SSTRRSFTRFWYSST*RHWLSFCSCKCFSI
Trigger: GATACTGAAGCACTTGCAGGAGCAGAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 90 bp TTCAAAGTGAGCTTTTGGGTCTCGGTGAACTCCAGCTGCAGCTCCTaGAGCCGGCACTGCAGGATGGTGATGTCCTTATCCTTCCTCTCA +
Preference number: 1 (lower is better)
Translates to: FKVSFWVSVNSSCSS*SRHCRMVMSLSFLS
Trigger: TGAGAGGAAGGATAAGGACATCACCATCCTGCAGTGCCGGCTGCAGGAGCTGCAGCTGGAGTTCACCGAGACCCAAAAGCTCACTTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 90 bp TTGGCTGCCAGCATCTTGAGGTCATTCTGGTGTTGCTTCTGCCACTaGAGCACCTGGCAGCTCATCTCCTCTAGCTTCTTGTCAAAGGCG +
Preference number: 1 (lower is better)
Translates to: LAASILRSFWCCFCH*STWQLISSSFLSKA
Trigger: CGCCTTTGACAAGAAGCTAGAGGAGATGAGCTGCCAGGTGCTGCAGTGGCAGAAGCAACACCAGAATGACCTCAAGATGCTGGCAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 90 bp AGGTTCTCTTTTAAGGCGGCCATCTCCTCCTGGAACTCCCTGAGCTaGTCCTCTTTGGCTGCCAGCATCTTGAGGTCATTCTGGTGTTGC +
Preference number: 1 (lower is better)
Translates to: RFSFKAAISSWNSLS*SSLAASILRSFWCC
Trigger: GCAACACCAGAATGACCTCAAGATGCTGGCAGCCAAAGAGGAGCAGCTCAGGGAGTTCCAGGAGGAGATGGCCGCCTTAAAAGAGAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CCA 90 bp AGCATCTTGAGGTCATTCTGGTGTTGCTTCTGCCACTGCAGCACCTaGCAGCTCATCTCCTCTAGCTTCTTGTCAAAGGCGTGCACCTCC +
Preference number: 1 (lower is better)
Translates to: SILRSFWCCFCHCST*QLISSSFLSKACTS
Trigger: GGAGGTGCACGCCTTTGACAAGAAGCTAGAGGAGATGAGCTGCCAGGTGCTGCAGTGGCAGAAGCAACACCAGAATGACCTCAAGATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 90 bp TTGTCTTTCTTCAAAGTGAGCTTTTGGGTCTCGGTGAACTCCAGCTaGAGCTCCTGCAGCCGGCACTGCAGGATGGTGATGTCCTTATCC +
Preference number: 1 (lower is better)
Translates to: LSFFKVSFWVSVNSS*SSCSRHCRMVMSLS
Trigger: GGATAAGGACATCACCATCCTGCAGTGCCGGCTGCAGGAGCTGCAGCTGGAGTTCACCGAGACCCAAAAGCTCACTTTGAAGAAAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 90 bp TTATCCTTCCTCTCAATGTGGGCAGATGTCTCCTCCCGCAGTCCGTaGAGGTCCAGCTCCAGCTTCATCATGTCCTTCATGATGTTTCTC +
Preference number: 1 (lower is better)
Translates to: LSFLSMWADVSSRSP*RSSSSFIMSFMMFL
Trigger: GAGAAACATCATGAAGGACATGATGAAGCTGGAGCTGGACCTGCACGGACTGCGGGAGGAGACATCTGCCCACATTGAGAGGAAGGATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 90 bp GGTTCCCTGTCCTTTTCGCCACTCAGCTTGGCAATGTATTTCACCTaGTCTCGGAGCTGGTTTCCTAGTTTCTCATTGGCGACCTTCTGC +
Preference number: 1 (lower is better)
Translates to: GSLSFSPLSLAMYFT*SRSWFPSFSLATFC
Trigger: GCAGAAGGTCGCCAATGAGAAACTAGGAAACCAGCTCCGAGAGCAGGTGAAATACATTGCCAAGCTGAGTGGCGAAAAGGACAGGGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR TCA 90 bp GAGGTTTGTTCCTTCTCAGCCATCGAGGACTCCTTCTGCAGCATCTaGAGTTCTCTCTGTAGTTCCTGGATGGTGTCTGCCTTCTGCTTG +
Preference number: 1 (lower is better)
Translates to: EVCSFSAIEDSFCSI*SSLCSSWMVSAFCL
Trigger: CAAGCAGAAGGCAGACACCATCCAGGAACTACAGAGAGAACTTCAGATGCTGCAGAAGGAGTCCTCGATGGCTGAGAAGGAACAAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CCA 90 bp CGCAGATCCTTCACCAGGTTCTGGTACTCCTCCACATGCAGGCACTaGCTGTCTTTCTGCTCCTGCAAGTGCTTCAGTATCTTTTTGATG +
Preference number: 1 (lower is better)
Translates to: RRSFTRFWYSSTCRH*LSFCSCKCFSIFLM
Trigger: CATCAAAAAGATACTGAAGCACTTGCAGGAGCAGAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGGATCTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR TCA 90 bp CTGATGCTCTTGAATCATGCAAGGAGAAGTGTATATCCGTACCTTTaGATGATCACCCTTGTTCTCAGGCTCCTGACCCATGATCCCGCC +
Preference number: 1 (lower is better)
Translates to: LMLLNHARRSVYPYL*MITLVLRLLTHDPA
Trigger: GGCGGGATCATGGGTCAGGAGCCTGAGAACAAGGGTGATCATTCAAAGGTACGGATATACACTTCTCCTTGCATGATTCAAGAGCATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 90 bp ACCAGGTTCTGGTACTCCTCCACATGCAGGCACTGGCTGTCTTTCTaGTCCTGCAAGTGCTTCAGTATCTTTTTGATGTCTTCACACTCT +
Preference number: 1 (lower is better)
Translates to: TRFWYSSTCRHWLSF*SCKCFSIFLMSSHS
Trigger: AGAGTGTGAAGACATCAAAAAGATACTGAAGCACTTGCAGGAGCAGAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCAGAACCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR TCA 90 bp GTGGGAGGAGTTGTTAAAATCCGATCTAAAGCATATCGGAATGAGTaGGCTTCCTTGATTACATCGCCAGTCGAACATGGGGACGGCAGA +
Preference number: 1 (lower is better)
Translates to: VGGVVKIRSKAYRNE*ASLITSPVEHGDGR
Trigger: TCTGCCGTCCCCATGTTCGACTGGCGATGTAATCAAGGAAGCTCACTCATTCCGATATGCTTTAGATCGGATTTTAACAACTCCTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR GCA 90 bp TTCATCTTCTTCTCTTCTATCTCCTTCTTCAGCTTCTTGTTTTCCTaGTGCAAGTGGACCATTACACTGTGGAGGTGGCTGTGGGAAGGA +
Preference number: 1 (lower is better)
Translates to: FIFFSSISFFSFLFS*CKWTITLWRWLWEG
Trigger: TCCTTCCCACAGCCACCTCCACAGTGTAATGGTCCACTTGCAGCAGGAAAACAAGAAGCTGAAGAAGGAGATAGAAGAGAAGAAGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR TCA 90 bp GAACCAAAGCGTTACTGCAGGCCAGCTTATTTCGAAGTTCTTGAATaGGATCATCCTGTTGAGAGACCTTTTGCCAGACTTCAGACAGTC +
Preference number: 1 (lower is better)
Translates to: EPKRYCRPAYFEVLE*DHPVERPFARLQTV
Trigger: GACTGTCTGAAGTCTGGCAAAAGGTCTCTCAACAGGATGATCTCATTCAAGAACTTCGAAATAAGCTGGCCTGCAGTAACGCTTTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATaGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTGCAAA +
Preference number: 1 (lower is better)
Translates to: EFGPGDGSMVLKLTP*QEVDKTQQKLVSCK
Trigger: TTTGCAAGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
3UTR GCA 90 bp AGACTTCAGACAGTCGTTTCTGAGTCTCCTGATGCTCTTGAATCATaGAAGGAGAAGTGTATATCCGTACCTTTGAATGATCACCCTTGT +
Preference number: 1 (lower is better)
Translates to: RLQTVVSESPDALES*KEKCISVPLNDHPC
Trigger: ACAAGGGTGATCATTCAAAGGTACGGATATACACTTCTCCTTGCATGATTCAAGAGCATCAGGAGACTCAGAAACGACTGTCTGAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CCA 90 bp CTAAAATGTAACATTGGAAGACTTGATGCCAAAGCCCAAATAGCTTaGGGCTCCACCAGATATGAGATGAGACCTTCCACATATGGAAGA +
Preference number: 1 (lower is better)
Translates to: LKCNIGRLDAKAQIA*GSTRYEMRPSTYGR
Trigger: TCTTCCATATGTGGAAGGTCTCATCTCATATCTGGTGGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCCAATGTTACATTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
3UTR-3UTR TCA 90 bp CTCGCCGCACGCCAGCCCGCTTTGGTCTGTGAGCTGAGGCTGTCCCCAGAGAGGTTCTGGCGGGAGCCCTaGGGCTGCGGACAAAGCCCT +
Preference number: 2 (lower is better)
Translates to: LAARQPALVCELRLSPERFWREP*GCGQSP
Trigger: AGGGCTTTGTCCGCAGCCTCAGGGCTCCCGCCAGAA...CCTCTCTGGGGACAGCCTCAGCTCACAGACCAAAGCGGGCTGGCGTGCGGCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR-3UTR GCA 90 bp CGGCCCAGAGCTCCCCACCATGGGTTAGGAACAGTAAGTCCTGGGGCTCTGCATGAGTATCCGAGGTGCTaGCGGGGCAGCGGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: RPRAPHHGLGTVSPGALHEYPRC*RGSGRW
Trigger: CCACCTCCCGCTGCCCCGGCAGCACCTCGGATACTC...ATGCAGAGCCCCAGGACTTACTGTTCCTAACCCATGGTGGGGAGCTCTGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR-3UTR CCA 90 bp CGGAAAGAGCAAGGGGAGCCCATGACCCCTCGCCGCACGCCAGCCCGCTTTGGTTGTCCCCAGAGAGGATaGCAGCAGGTATTGGGTCCT +
Preference number: 2 (lower is better)
Translates to: RKEQGEPMTPRRTPARFGCPQRG*QQVLGP
Trigger: AGGACCCAATACCTGCTGCCATCCTCTCTGGGGACA...ACCAAAGCGGGCTGGCGTGCGGCGAGGGGTCATGGGCTCCCCTTGCTCTTTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR-3UTR TCA 90 bp GACACGGCCTCTAGTTCCACGCGCAGATCCTTCACCAGGTTCTGGTACTCCTCCCAGGCTCCTGACCCATaGTCCCGCCGAGTTCCCCCT +
Preference number: 2 (lower is better)
Translates to: DTASSSTRRSFTRFWYSSQAPDP*SRRVPP
Trigger: AGGGGGAACTCGGCGGGATCATGGGTCAGGAGCCTG...GGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACTAGAGGCCGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR TCA 90 bp CCCCACCATGGGTTAGGAACAGTAAGTCCTGGGGCTCTGCATCCTCCTGCCCTCGCCCGCTTTGGTCTGTaGGCTGAGGCTGTCCCCAGA +
Preference number: 2 (lower is better)
Translates to: PHHGLGTVSPGALHPPALARFGL*AEAVPR
Trigger: TCTGGGGACAGCCTCAGCTCACAGACCAAAGCGGGC...GAGGGCAGGAGGATGCAGAGCCCCAGGACTTACTGTTCCTAACCCATGGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR-3UTR GCA 90 bp CGGCCCAGAGCTCCCCACCATGGGTTAGGAACAGTAAGTCCTGGGGCTCTGCATGGTGGAGTTCTTCCATaGAGGAGCACGGCATGGCGG +
Preference number: 2 (lower is better)
Translates to: RPRAPHHGLGTVSPGALHGGVLP*RSTAWR
Trigger: CCGCCATGCCGTGCTCCTGCATGGAAGAACTCCACC...ATGCAGAGCCCCAGGACTTACTGTTCCTAACCCATGGTGGGGAGCTCTGGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR-3UTR CCA 90 bp TGCTGTGTCTCCAGGTCTACGAAGATCTACACTCCAGGCCGGAAAGAGCAAGGGTGCAGGAGCACGGCATaGCGGGAGCGGGGCTGCAGA +
Preference number: 2 (lower is better)
Translates to: CCVSRSTKIYTPGRKEQGCRSTA*RERGCR
Trigger: TCTGCAGCCCCGCTCCCGCCATGCCGTGCTCCTGCA...CCCTTGCTCTTTCCGGCCTGGAGTGTAGATCTTCGTAGACCTGGAGACACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR-3UTR TCA 90 bp TACATCGCCAGTCGAACATGGGGACGGCAGAGGAGTGAGAATGTGCCGGGGAGGCTTTGGTCTGTGAGCTaGGGCTGTCCCCAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: YIASRTWGRQRSENVPGRLWSVS*GCPQRG
Trigger: TCCTCTCTGGGGACAGCCTCAGCTCACAGACCAAAG...CCTCCCCGGCACATTCTCACTCCTCTGCCGTCCCCATGTTCGACTGGCGATGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR-3UTR GCA 90 bp TGCTGTGTCTCCAGGTCTACGAAGATCTACACTCCAGGCCGGAAAGAGCAAGGGTGGCGGGAGCGGGGCTaGAGAGTATCCGAGGTGCTG +
Preference number: 2 (lower is better)
Translates to: CCVSRSTKIYTPGRKEQGWRERG*RVSEVL
Trigger: CAGCACCTCGGATACTCTGCAGCCCCGCTCCCGCCA...CCCTTGCTCTTTCCGGCCTGGAGTGTAGATCTTCGTAGACCTGGAGACACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR-3UTR TCA 90 bp TTTAAGGCGGCCATCTCCTCCTGGAACTCCCTGAGCTGCTCCTCTTTGGCTGCCGCTTTTGGGTCTCGGTaGACTCCAGCTGCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: FKAAISSWNSLSCSSLAAAFGSR*TPAAAP
Trigger: AGGAGCTGCAGCTGGAGTTCACCGAGACCCAAAAGC...GGCAGCCAAAGAGGAGCAGCTCAGGGAGTTCCAGGAGGAGATGGCCGCCTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR TCA 90 bp CGGAAAGAGCAAGGGGAGCCCATGACCCCTCGCCGCACGCCAGCCCGCTTTGGTCAAAGCCCTTTCATCTaGGGACTTTCATCTGTGCAT +
Preference number: 2 (lower is better)
Translates to: RKEQGEPMTPRRTPARFGQSPFI*GLSSVH
Trigger: ATGCACAGATGAAAGTCCTCAGATGAAAGGGCTTTG...ACCAAAGCGGGCTGGCGTGCGGCGAGGGGTCATGGGCTCCCCTTGCTCTTTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR-3UTR CCA 90 bp ACATCGCCAGTCGAACATGGGGACGGCAGAGGAGTGAGAATGTGCCGGGGAGGACTGGACCAGACTCTCTaGCAGAGGAGGTGGAGTTCT +
Preference number: 2 (lower is better)
Translates to: TSPVEHGDGRGVRMCRGGLDQTL*QRRWSS
Trigger: AGAACTCCACCTCCTCTGCCAGAGAGTCTGGTCCAG...TCCTCCCCGGCACATTCTCACTCCTCTGCCGTCCCCATGTTCGACTGGCGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR-3UTR CCA 90 bp GGCGGGAGCCCTGAGGCTGCGGACAAAGCCCTTTCATCTGAGGACTTTCATCTGCAGGGCAGTTCCTGCTaGACCAGACTCTCTGGCAGA +
Preference number: 2 (lower is better)
Translates to: GGSPEAADKALSSEDFHLQGSSC*TRLSGR
Trigger: TCTGCCAGAGAGTCTGGTCCAGCAGGAACTGCCCTG...CAGATGAAAGTCCTCAGATGAAAGGGCTTTGTCCGCAGCCTCAGGGCTCCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR-3UTR CCA 90 bp TTTAAGGCGGCCATCTCCTCCTGGAACTCCCTGAGCTGCTCCTCTTTGGCTGCCTGCTCCTGCGCCAAATaGAGCTTCTCCCCTGTGTTC +
Preference number: 2 (lower is better)
Translates to: FKAAISSWNSLSCSSLAACSCAK*SFSPVF
Trigger: GAACACAGGGGAGAAGCTCCATTTGGCGCAGGAGCA...GGCAGCCAAAGAGGAGCAGCTCAGGGAGTTCCAGGAGGAGATGGCCGCCTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CAA 90 bp TTCTGGACCTCAGCCTGCAGGGCCTTGCACTCCGCCTCCTTGGACTaGTCCTGCTTAGCCTCCTTGACTGTCATTTCAAGTTCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: FWTSACRALHSASLD*SCLASLTVISSSVA
Trigger: GGCCACAGAACTTGAAATGACAGTCAAGGAGGCTAAGCAGGACAAGTCCAAGGAGGCGGAGTGCAAGGCCCTGCAGGCTGAGGTCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR TCA 90 bp TGGGGCAACCCCTTCCAGCCCAAGGTGCCGCACACTTTCTCCCTCTGTGTGGACATCCGTACCTTTGAATaGTCACCCTTGTTCTCAGGC +
Preference number: 2 (lower is better)
Translates to: WGNPFQPKVPHTFSLCVDIRTFE*SPLFSG
Trigger: GCCTGAGAACAAGGGTGATCATTCAAAGGTACGGAT...GTCCACACAGAGGGAGAAAGTGTGCGGCACCTTGGGCTGGAAGGGGTTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CCA 90 bp GGTCATTCTGGTGTTGCTTCTGCCACTGCAGCACCTGGCAGCTCATCTCCTCTACTGTTCTTCAGCTTCTaGACCTCAGCCTGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GHSGVASATAAPGSSSPLLFFSF*TSACRA
Trigger: GGCCCTGCAGGCTGAGGTCCAGAAGCTGAAGAACAG...TAGAGGAGATGAGCTGCCAGGTGCTGCAGTGGCAGAAGCAACACCAGAATGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CCA 90 bp TTTAAGGCGGCCATCTCCTCCTGGAACTCCCTGAGCTGCTCCTCTTTGGCTGCCCCTTGCTCCCTGTGCTaGTGCTTGATACGATCAAGC +
Preference number: 2 (lower is better)
Translates to: FKAAISSWNSLSCSSLAAPCSLC*CLIRSS
Trigger: GCTTGATCGTATCAAGCACCAGCACAGGGAGCAAGG...GGCAGCCAAAGAGGAGCAGCTCAGGGAGTTCCAGGAGGAGATGGCCGCCTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CAA 90 bp AGGGCCTTGCACTCCGCCTCCTTGGACTTGTCCTGCTTAGCCTCCTaGACTGTCATTTCAAGTTCTGTGGCCATGCACTGCTGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: RALHSASLDLSCLAS*TVISSSVAMHCCFS
Trigger: GGAGAAGCAGCAGTGCATGGCCACAGAACTTGAAATGACAGTCAAGGAGGCTAAGCAGGACAAGTCCAAGGAGGCGGAGTGCAAGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CAA 90 bp TTTAAGGCGGCCATCTCCTCCTGGAACTCCCTGAGCTGCTCCTCTTaGGCTGCCAGCATCTTGAGGTCATTCTGGTGTTGCTTCTGCCAC +
Preference number: 2 (lower is better)
Translates to: FKAAISSWNSLSCSS*AASILRSFWCCFCH
Trigger: GTGGCAGAAGCAACACCAGAATGACCTCAAGATGCTGGCAGCCAAAGAGGAGCAGCTCAGGGAGTTCCAGGAGGAGATGGCCGCCTTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR TCA 90 bp TCGAGGGCTTGTGTCAGGTCATCCTGGCAGGCGGCTGACTTCCGGGATAATGCAGGGCTCCACCAGATATaGGATGAGACCTTCCACATA +
Preference number: 2 (lower is better)
Translates to: SRACVRSSWQAADFRDNAGLHQI*DETFHI
Trigger: TATGTGGAAGGTCTCATCTCATATCTGGTGGAGCCC...TGCATTATCCCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACAAGCCCTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537392.1
3UTR-3UTR GCA 90 bp ACTTTCTCCCTCTGTGTGGACTCCGTTCTGCTCGGGCCTAGGGCTTTGGTGCATTGGTACTCCTCCACATaGAGGCACTGGCTGTCTTTC +
Preference number: 2 (lower is better)
Translates to: TFSLCVDSVLLGPRALVHWYSST*RHWLSF
Trigger: GAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCA...ATGCACCAAAGCCCTAGGCCCGAGCAGAACGGAGTCCACACAGAGGGAGAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR TCA 90 bp TGTGTTGGGGCTGCTGGCTCTGGTTGGTTCCCTGTCCTTTTCGCCACTCAGCTTCCCTGTGCTGGTGCTTaGTACGATCAAGCATGTCAT +
Preference number: 2 (lower is better)
Translates to: CVGAAGSGWFPVLFATQLPCAGA*YDQACH
Trigger: ATGACATGCTTGATCGTATCAAGCACCAGCACAGGG...AAGCTGAGTGGCGAAAAGGACAGGGAACCAACCAGAGCCAGCAGCCCCAACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR GCA 90 bp TGGGGCAACCCCTTCCAGCCCAAGGTGCCGCACACTTTCTCCCTCTGTGTGGACCTAGTAACTCGATGTTaGTCAGGGAAGACTGGTATT +
Preference number: 2 (lower is better)
Translates to: WGNPFQPKVPHTFSLCVDLVTRC*SGKTGI
Trigger: AATACCAGTCTTCCCTGAGCAACATCGAGTTACTAG...GTCCACACAGAGGGAGAAAGTGTGCGGCACCTTGGGCTGGAAGGGGTTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CCA 90 bp GACACGGCCTCTAGTTCCACGCGCAGATCCTTCACCAGGTTCTGGTACTCCTCCGAGGGTATCTGTGGGTaGCTGTACAGGAAGCAAAAT +
Preference number: 2 (lower is better)
Translates to: DTASSSTRRSFTRFWYSSEGICG*LYRKQN
Trigger: ATTTTGCTTCCTGTACAGCCACCCACAGATACCCTC...GGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACTAGAGGCCGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR TCA 90 bp TGTGTTGGGGCTGCTGGCTCTGGTTGGTTCCCTGTCCTTTTCGCCACTCAGCTTAATAGGCTGGGACCGTaGTATACTCCTGTAAGAGCT +
Preference number: 2 (lower is better)
Translates to: CVGAAGSGWFPVLFATQLNRLGP*YTPVRA
Trigger: AGCTCTTACAGGAGTATATCACGGTCCCAGCCTATT...AAGCTGAGTGGCGAAAAGGACAGGGAACCAACCAGAGCCAGCAGCCCCAACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR TCA 90 bp TGGGGCAACCCCTTCCAGCCCAAGGTGCCGCACACTTTCTCCCTCTGTGTGGACATTAAGGACTCCTTCTaGAGGGCTATCTCTTTATTC +
Preference number: 2 (lower is better)
Translates to: WGNPFQPKVPHTFSLCVDIKDSF*RAISLF
Trigger: GAATAAAGAGATAGCCCTTCAGAAGGAGTCCTTAAT...GTCCACACAGAGGGAGAAAGTGTGCGGCACCTTGGGCTGGAAGGGGTTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR TCA 90 bp TCTGCCACTGCAGCACCTGGCAGCTCATCTCCTCTAGCTTCTTGTCAAAGGCGTCCTGTGTTCTCGTTGTaGTTTCCCATTTCCTCCTCA +
Preference number: 2 (lower is better)
Translates to: SATAAPGSSSPLASCQRRPVFSL*FPISSS
Trigger: TGAGGAGGAAATGGGAAATCACAACGAGAACACAGG...ACGCCTTTGACAAGAAGCTAGAGGAGATGAGCTGCCAGGTGCTGCAGTGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR TCA 90 bp CCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCGAGAAATTAACGAGGTaGTTCCTCAAGGGCTGGCCG +
Preference number: 2 (lower is better)
Translates to: PLKKHPWKCCSGLDVDSSEKLTR*FLKGWP
Trigger: CGGCCAGCCCTTGAGGAATCACCTCGTTAATTTCTC...GCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537465.5
3UTR-3UTR GCA 90 bp TTCCTGCCGCAAAGCTTCAAGTTCTCCCTCCATCAGCTTCTCATGCTCTTTGCTTCTGTGGCCATGCACTaGTGCTTCTCCAGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: FLPQSFKFSLHQLLMLFASVAMH*CFSSSF
Trigger: GAAGGAGCTGGAGAAGCAGCAGTGCATGGCCACAGA...AGCAAAGAGCATGAGAAGCTGATGGAGGGAGAACTTGAAGCTTTGCGGCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR GCA 90 bp TTCCTGCCGCAAAGCTTCAAGTTCTCCCTCCATCAGCTTCTCATGCTCTTTGCTGTGCAGCCTCTTCTTTaGACTGGGCTGCTTGCTGAG +
Preference number: 2 (lower is better)
Translates to: FLPQSFKFSLHQLLMLFAVQPLL*TGLLAE
Trigger: CTCAGCAAGCAGCCCAGTGCAAAGAAGAGGCTGCAC...AGCAAAGAGCATGAGAAGCTGATGGAGGGAGAACTTGAAGCTTTGCGGCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CCA 90 bp ACTTTCTCCCTCTGTGTGGACTCCGTTCTGCTCGGGCCTAGGGCTTTGGTGCATCTAAAGCTCACTCCATaGCAGGAAGTGGACAAAACT +
Preference number: 2 (lower is better)
Translates to: TFSLCVDSVLLGPRALVHLKLTP*QEVDKT
Trigger: AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG...ATGCACCAAAGCCCTAGGCCCGAGCAGAACGGAGTCCACACAGAGGGAGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CCA 90 bp GGTAGTCTGGAGATAGTGCTTCTCCTTCTGCAGAGCTTTGTCCAGCTGGGCCTGAAAGCCCAAATAGCTTaGGGCTCCACCAGATATGAG +
Preference number: 2 (lower is better)
Translates to: GSLEIVLLLLQSFVQLGLKAQIA*GSTRYE
Trigger: CTCATATCTGGTGGAGCCCCAAGCTATTTGGGCTTT...CAGGCCCAGCTGGACAAAGCTCTGCAGAAGGAGAAGCACTATCTCCAGACTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537392.1
3UTR-3UTR GCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGCACCCGTGGAAATGCTaGTCAGGGCTAGATGTGGAT +
Preference number: 2 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQHPWKC*SGLDVD
Trigger: ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTG...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
3UTR CAA 90 bp TGCCGCAAAGCTTCAAGTTCTCCCTCCATCAGCTTCTCATGCTCTTaGCTCTTCTTCAACTGCTCCCGTTTGTCCTCCAGAAGCTTTGTG +
Preference number: 2 (lower is better)
Translates to: CRKASSSPSISFSCS*LFFNCSRLSSRSFV
Trigger: CACAAAGCTTCTGGAGGACAAACGGGAGCAGTTGAAGAAGAGCAAAGAGCATGAGAAGCTGATGGAGGGAGAACTTGAAGCTTTGCGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR TCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGTACTCCTGTAAGAGCTaGTCCAGGTCAAGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVYSCKS*SRSRER
Trigger: CCTCTCTCTTGACCTGGATCAGCTCTTACAGGAGTA...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
3UTR-3UTR TCA 90 bp GAGCTAGGAGGGTATCTGTGGGTGGCTGTACAGGAAGCAAAATCGGCTTGTAGTTCTTTCAGTTTGCAGTaGTGGTGCAGAAGAACCAGG +
Preference number: 2 (lower is better)
Translates to: ELGGYLWVAVQEAKSACSSFSLQ*WCRRTR
Trigger: CCTGGTTCTTCTGCACCATCACTGCAAACTGAAAGA...ACTACAAGCCGATTTTGCTTCCTGTACAGCCACCCACAGATACCCTCCTAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR TCA 90 bp GGTCATTCTGGTGTTGCTTCTGCCACTGCAGCACCTGGCAGCTCATCTCCTCTAGTATATCCGTACCTTTaGATGATCACCCTTGTTCTC +
Preference number: 2 (lower is better)
Translates to: GHSGVASATAAPGSSSPLVYPYL*MITLVL
Trigger: GAGAACAAGGGTGATCATTCAAAGGTACGGATATAC...TAGAGGAGATGAGCTGCCAGGTGCTGCAGTGGCAGAAGCAACACCAGAATGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR GCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGAAACACCCGTGGAAATaGTGCTCAGGGCTAGATGTG +
Preference number: 2 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVKHPWK*CSGLDV
Trigger: CACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTT...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
3UTR-3UTR CCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAACTGAAGAAACACCCGTaGAAATGCTGCTCAGGGCTA +
Preference number: 2 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQELKKHP*KCCSGL
Trigger: TAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAG...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
3UTR-3UTR CCA 90 bp GGTAGTCTGGAGATAGTGCTTCTCCTTCTGCAGAGCTTTGTCCAGCTGGGCCTGCTCCATGGCAGGAAGTaGACAAAACTCAACAAAAGT +
Preference number: 2 (lower is better)
Translates to: GSLEIVLLLLQSFVQLGLLHGRK*TKLNKS
Trigger: ACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAG...CAGGCCCAGCTGGACAAAGCTCTGCAGAAGGAGAAGCACTATCTCCAGACTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR TCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGAACTCACTGTCCTCTaGAGAAACACCCGTGGAAAT +
Preference number: 2 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVELTVL*RNTRGN
Trigger: ATTTCCACGGGTGTTTCTTCAGAGGACAGTGAGTTC...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
3UTR-3UTR TCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAAATAGGCTGGGACCGTaGTATACTCCTGTAAGAGCT +
Preference number: 2 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQENRLGP*YTPVRA
Trigger: AGCTCTTACAGGAGTATATCACGGTCCCAGCCTATT...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
3UTR-3UTR TCA 90 bp TCTTTCTTCAAAGTGAGCTTTTGGGTCTCGGTGAACTCCAGCTGCAGCTCCTGCATGAGATCATCCTGTTaGGAGACCTTTTGCCAGACT +
Preference number: 2 (lower is better)
Translates to: SFFKVSFWVSVNSSCSSCMRSSC*ETFCQT
Trigger: AGTCTGGCAAAAGGTCTCTCAACAGGATGATCTCAT...GCAGGAGCTGCAGCTGGAGTTCACCGAGACCCAAAAGCTCACTTTGAAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR TCA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAGCTCTGCTGCAGGGTaGCTTCTTGCCTCTGGGGTA +
Preference number: 2 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLSSAAG*LLASGV
Trigger: TACCCCAGAGGCAAGAAGTCACCCTGCAGCAGAGCT...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
3UTR-3UTR GCA 90 bp TGCATCATAGGCTTCTTTGGTGATGGTAGTCTGGAGATAGTGCTTCTCCTTCTGCACCCGTGGAAATGCTaGTCAGGGCTAGATGTGGAT +
Preference number: 2 (lower is better)
Translates to: CIIGFFGDGSLEIVLLLLHPWKC*SGLDVD
Trigger: ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTG...CAGAAGGAGAAGCACTATCTCCAGACTACCATCACCAAAGAAGCCTATGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR GCA 90 bp TCTGAGTCTCCTGATGCTCTTGAATCATGCAAGGAGAAGTGTATATCCGTACCTCCGCCGAGTTCCCCCTaGAACATCTTCACTTGGCAT +
Preference number: 2 (lower is better)
Translates to: SESPDALESCKEKCISVPPPSSP*NIFTWH
Trigger: ATGCCAAGTGAAGATGTTGCAGGGGGAACTCGGCGG...AGGTACGGATATACACTTCTCCTTGCATGATTCAAGAGCATCAGGAGACTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CCA 90 bp CCATTGCTCCAAGTTGGTCATAATCTGATCATTCCCTCGGTAGAGCCTACAGGTCTGAAGAAACACCCGTaGAAATGCTGCTCAGGGCTA +
Preference number: 2 (lower is better)
Translates to: PLLQVGHNLIIPSVEPTGLKKHP*KCCSGL
Trigger: TAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAG...ACCTGTAGGCTCTACCGAGGGAATGATCAGATTATGACCAACTTGGAGCAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR TCA 90 bp AAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTATGGAACTCACTGTCCTCTaGAGAAACACCCGTGGAAAT +
Preference number: 2 (lower is better)
Translates to: KKHPWKCCSGLDVDSSSMELTVL*RNTRGN
Trigger: ATTTCCACGGGTGTTTCTTCAGAGGACAGTGAGTTC...CATACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
3UTR-3UTR TCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAAATAGGCTGGGACCGTaGTATACTCCTGTAAGAGCT +
Preference number: 2 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKNRLGP*YTPVRA
Trigger: AGCTCTTACAGGAGTATATCACGGTCCCAGCCTATT...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
3UTR-3UTR GCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACACCCGTGGAAATGCTaGTCAGGGCTAGATGTGGAT +
Preference number: 2 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQHPWKC*SGLDVD
Trigger: ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTG...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
3UTR-3UTR GCA 90 bp AGCTCATCTCCTCTAGCTTCTTGTCAAAGGCGTGCACCTCCAGCTCACTCTCCTCATCTTCTTTCAGTTTaGAGTGATGGTGCAGAAGAA +
Preference number: 2 (lower is better)
Translates to: SSSPLASCQRRAPPAHSPHLLSV*SDGAEE
Trigger: TTCTTCTGCACCATCACTGCAAACTGAAAGAAGATG...AGGAGAGTGAGCTGGAGGTGCACGCCTTTGACAAGAAGCTAGAGGAGATGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCTGAAGAAACACCCGTaGAAATGCTGCTCAGGGCTA +
Preference number: 2 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTLKKHP*KCCSGL
Trigger: TAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAG...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
3UTR-3UTR TCA 90 bp TTCCTGCCGCAAAGCTTCAAGTTCTCCCTCCATCAGCTTCTCATGCTCTTTGCTCCTCTTTTCCTTGTCTaGATTTTCAAGCTTCCTCAG +
Preference number: 2 (lower is better)
Translates to: FLPQSFKFSLHQLLMLFAPLFLV*IFKLPQ
Trigger: CTGAGGAAGCTTGAAAATTCAGACAAGGAAAAGAGG...AGCAAAGAGCATGAGAAGCTGATGGAGGGAGAACTTGAAGCTTTGCGGCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CCA 90 bp TGTGCTCATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGCTGAAGAAACACCCGTaGAAATGCTGCTCAGGGCTA +
Preference number: 2 (lower is better)
Translates to: CAHAHVFISEFGPGDGSMLKKHP*KCCSGL
Trigger: TAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAG...CATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATGAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
3UTR-3UTR CCA 90 bp AGGGAGGAAATGAGAGTTTTGATTCGAGGAGAAATTAACGAGGTGATTCCTCAACATGGAGTTTACAGGTaGCAGGAAAGGCGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: REEMRVLIRGEINEVIPQHGVYR*QERRLW
Trigger: CCACAGCCGCCTTTCCTGCCACCTGTAAACTCCATG...TTGAGGAATCACCTCGTTAATTTCTCCTCGAATCAAAACTCTCATTTCCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
3UTR CAA 90 bp ACTGCAGGCCAGCTTATTTCGAAGTTCTTGAATGAGATCATCCTGTaGAGAGACCTTTTGCCAGACTTCAGACAGTCGTTTCTGAGTCTC +
Preference number: 2 (lower is better)
Translates to: TAGQLISKFLNEIIL*RDLLPDFRQSFLSL
Trigger: GAGACTCAGAAACGACTGTCTGAAGTCTGGCAAAAGGTCTCTCAACAGGATGATCTCATTCAAGAACTTCGAAATAAGCTGGCCTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CAA 90 bp CTCCAGAACCAAAGCGTTACTGCAGGCCAGCTTATTTCGAAGTTCTaGAATGAGATCATCCTGTTGAGAGACCTTTTGCCAGACTTCAGA +
Preference number: 2 (lower is better)
Translates to: LQNQSVTAGQLISKF*NEIILLRDLLPDFR
Trigger: TCTGAAGTCTGGCAAAAGGTCTCTCAACAGGATGATCTCATTCAAGAACTTCGAAATAAGCTGGCCTGCAGTAACGCTTTGGTTCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR TCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAATGGAGTTGTCTCAGATaGCACTGTTTACTGGACCCA +
Preference number: 2 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQWSCLR*HCLLDP
Trigger: TGGGTCCAGTAAACAGTGTCATCTGAGACAACTCCA...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR GCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTAAACACCCGTGGAAATaGTGCTCAGGGCTAGATGTG +
Preference number: 2 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSKHPWK*CSGLDV
Trigger: CACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTT...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
3UTR-3UTR GCA 90 bp CTTTTTCATCCTTTCCTCATAAGCAATGATTTCCTCTTCCAGCTGAGCTTTCTTAAGGCGAGTTGCTCCTaGGCCAAATGGAGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: LFHPFLISNDFLFQLSFLKASCS*AKWSFS
Trigger: GGAGAAGCTCCATTTGGCGCAGGAGCAACTCGCCTT...AAGAAAGCTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAAGGATGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCTAAAGCTCACTCCATaGCAGGAAGTGGACAAAACT +
Preference number: 2 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTLKLTP*QEVDKT
Trigger: AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
3UTR-3UTR CCA 90 bp CCATTGCTCCAAGTTGGTCATAATCTGATCATTCCCTCGGTAGAGCCTACAGGTTCTTGGATGACTTGCTaGCTGGTGTTGTATTTGTTG +
Preference number: 2 (lower is better)
Translates to: PLLQVGHNLIIPSVEPTGSWMTC*LVLYLL
Trigger: CAACAAATACAACACCAGCCAGCAAGTCATCCAAGA...ACCTGTAGGCTCTACCGAGGGAATGATCAGATTATGACCAACTTGGAGCAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CAA 90 bp GGACTCCTTCTGAAGGGCTATCTCTTTATTCAAGTCTTGGATGACTaGCTGGCTGGTGTTGTATTTGTTGAGAGAGGATTCCAGTTGTGT +
Preference number: 2 (lower is better)
Translates to: GLLLKGYLFIQVLDD*LAGVVFVERGFQLC
Trigger: ACACAACTGGAATCCTCTCTCAACAAATACAACACCAGCCAGCAAGTCATCCAAGACTTGAATAAAGAGATAGCCCTTCAGAAGGAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR TCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTGAACTCACTGTCCTCTaGAGAAACACCCGTGGAAAT +
Preference number: 2 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSELTVL*RNTRGN
Trigger: ATTTCCACGGGTGTTTCTTCAGAGGACAGTGAGTTC...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
3UTR-3UTR TCA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAGAACTCACTGTCCTCTaGAGAAACACCCGTGGAAAT +
Preference number: 2 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLELTVL*RNTRGN
Trigger: ATTTCCACGGGTGTTTCTTCAGAGGACAGTGAGTTC...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
3UTR-3UTR GCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAAGAAGGGGTCTTAATTTaGCTCCTCCCTTTACAGATG +
Preference number: 2 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQEGVLI*LLPLQM
Trigger: CATCTGTAAAGGGAGGAGGCAAATTAAGACCCCTTC...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
3UTR CAA 90 bp CTTATTTCGAAGTTCTTGAATGAGATCATCCTGTTGAGAGACCTTTaGCCAGACTTCAGACAGTCGTTTCTGAGTCTCCTGATGCTCTTG +
Preference number: 2 (lower is better)
Translates to: LISKFLNEIILLRDL*PDFRQSFLSLLMLL
Trigger: CAAGAGCATCAGGAGACTCAGAAACGACTGTCTGAAGTCTGGCAAAAGGTCTCTCAACAGGATGATCTCATTCAAGAACTTCGAAATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CCA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATCTTGCAAAATAGGCTaGGACCGTGATATACTCCTG +
Preference number: 2 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPSCKIG*DRDILL
Trigger: CAGGAGTATATCACGGTCCCAGCCTATTTTGCAAGA...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
3UTR CAA 90 bp TCTTTATTCAAGTCTTGGATGACTTGCTGGCTGGTGTTGTATTTGTaGAGAGAGGATTCCAGTTGTGTAGAACAACACTGTAGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: SLFKSWMTCWLVLYL*REDSSCVEQHCSSA
Trigger: AGCAGAGCTACAGTGTTGTTCTACACAACTGGAATCCTCTCTCAACAAATACAACACCAGCCAGCAAGTCATCCAAGACTTGAATAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CAA 90 bp AGGGCTATCTCTTTATTCAAGTCTTGGATGACTTGCTGGCTGGTGTaGTATTTGTTGAGAGAGGATTCCAGTTGTGTAGAACAACACTGT +
Preference number: 2 (lower is better)
Translates to: RAISLFKSWMTCWLV*YLLREDSSCVEQHC
Trigger: ACAGTGTTGTTCTACACAACTGGAATCCTCTCTCAACAAATACAACACCAGCCAGCAAGTCATCCAAGACTTGAATAAAGAGATAGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR TCA 90 bp GAAATGAGAGTTTTGATTCGAGGAGAAATTAACGAGGTGATTCCTCAAGGGCTGGCTAAGAAAATGACTTaGGGCCACAAAAGGCCTATT +
Preference number: 2 (lower is better)
Translates to: EMRVLIRGEINEVIPQGLAKKMT*GHKRPI
Trigger: AATAGGCCTTTTGTGGCCTCAAGTCATTTTCTTAGC...CAGCCCTTGAGGAATCACCTCGTTAATTTCTCCTCGAATCAAAACTCTCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537465.5
3UTR CAA 90 bp ATCTCTTTATTCAAGTCTTGGATGACTTGCTGGCTGGTGTTGTATTaGTTGAGAGAGGATTCCAGTTGTGTAGAACAACACTGTAGCTCT +
Preference number: 2 (lower is better)
Translates to: ISLFKSWMTCWLVLY*LREDSSCVEQHCSS
Trigger: AGAGCTACAGTGTTGTTCTACACAACTGGAATCCTCTCTCAACAAATACAACACCAGCCAGCAAGTCATCCAAGACTTGAATAAAGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR TCA 90 bp TATTCTGGTCTAAAATGTAACATTGGAAGACTTGATGCCAAAGCCCAAATAGCTCCACCAGATATGAGATaGGACCTTCCACATATGGAA +
Preference number: 2 (lower is better)
Translates to: YSGLKCNIGRLDAKAQIAPPDMR*DLPHME
Trigger: TTCCATATGTGGAAGGTCTCATCTCATATCTGGTGG...AGCTATTTGGGCTTTGGCATCAAGTCTTCCAATGTTACATTTTAGACCAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
3UTR GCA 72 bp CGGCATGGCGGGAGCGGGGCTGCAGAGTATCCGAGGTaGTGCCGGGGCAGCGGGAGGTGGCTGGACCCATCG +
Preference number: 3 (lower is better)
Translates to: RHGGSGAAEYPR*CRGSGRWLDPS
Trigger: CGATGGGTCCAGCCACCTCCCGCTGCCCCGGCAGCACCTCGGATACTCTGCAGCCCCGCTCCCGCCATGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR GCA 72 bp ACCAGACTCTCTGGCAGAGGAGGTGGAGTTCTTCCATaGAGGAGCACGGCATGGCGGGAGCGGGGCTGCAGA +
Preference number: 3 (lower is better)
Translates to: TRLSGRGGGVLP*RSTAWRERGCR
Trigger: TCTGCAGCCCCGCTCCCGCCATGCCGTGCTCCTGCATGGAAGAACTCCACCTCCTCTGCCAGAGAGTCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR CCA 72 bp AGAGGAGGTGGAGTTCTTCCATGCAGGAGCACGGCATaGCGGGAGCGGGGCTGCAGAGTATCCGAGGTGCTG +
Preference number: 3 (lower is better)
Translates to: RGGGVLPCRSTA*RERGCRVSEVL
Trigger: CAGCACCTCGGATACTCTGCAGCCCCGCTCCCGCCATGCCGTGCTCCTGCATGGAAGAACTCCACCTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR GCA 72 bp TCCTCAAGGGCTGGCCGCATGGCCAGGCAGCTCTGCTaGAGGGTGACTTCTTGCCTCTGGGGTAACATGGAG +
Preference number: 3 (lower is better)
Translates to: SSRAGRMARQLC*RVTSCLWGNME
Trigger: CTCCATGTTACCCCAGAGGCAAGAAGTCACCCTGCAGCAGAGCTGCCTGGCCATGCGGCCAGCCCTTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
3UTR CCA 72 bp TCCAGCCCAAGGTGCCGCACACTTTCTCCCTCTGTGTaGACTCCGTTCTGCTCGGGCCTAGGGCTTTGGTGC +
Preference number: 3 (lower is better)
Translates to: SSPRCRTLSPSV*TPFCSGLGLWC
Trigger: GCACCAAAGCCCTAGGCCCGAGCAGAACGGAGTCCACACAGAGGGAGAAAGTGTGCGGCACCTTGGGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CAA 90 bp ACTTTCTCCCTCTGTGTGGACTCCGTTCTGCTCGGGCCTAGGGCTTTGGTGCATCCCGGCCAAGGCGAGTaGCTCCTGCGCCAAATGGAG +
Preference number: 3 (lower is better)
Translates to: TFSLCVDSVLLGPRALVHPGQGE*LLRQME
Trigger: CTCCATTTGGCGCAGGAGCAACTCGCCTTGGCCGGG...ATGCACCAAAGCCCTAGGCCCGAGCAGAACGGAGTCCACACAGAGGGAGAAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 72 bp GATTCCTCAAGGGCTGGCCGCATGGCCAGGCAGCTCTaGTGCAGGGTGACTTCTTGCCTCTGGGGTAACATG +
Preference number: 3 (lower is better)
Translates to: DSSRAGRMARQL*CRVTSCLWGNM
Trigger: CATGTTACCCCAGAGGCAAGAAGTCACCCTGCAGCAGAGCTGCCTGGCCATGCGGCCAGCCCTTGAGGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
3UTR CCA 72 bp TGCTGCTTGGCCTCTTCGAGACTGTTCTTCAGCTTCTaGACCTCAGCCTGCAGGGCCTTGCACTCCGCCTCC +
Preference number: 3 (lower is better)
Translates to: CCLASSRLFFSF*TSACRALHSAS
Trigger: GGAGGCGGAGTGCAAGGCCCTGCAGGCTGAGGTCCAGAAGCTGAAGAACAGTCTCGAAGAGGCCAAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 72 bp TCTAGAGAGGCGATCTTGTCCCCGGCCAAGGCGAGTTaGTCCTGCGCCAAATGGAGCTTCTCCCCTGTGTTC +
Preference number: 3 (lower is better)
Translates to: SREAILSPAKAS*SCAKWSFSPVF
Trigger: GAACACAGGGGAGAAGCTCCATTTGGCGCAGGAGCAACTCGCCTTGGCCGGGGACAAGATCGCCTCTCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 72 bp TTTCCTCTGGGTGTCCTCCAGGTGACAGCCTGCCAGTaGAGCCTCTTCTTTGCACTGGGCTGCTTGCTGAGC +
Preference number: 3 (lower is better)
Translates to: FPLGVLQVTACQ*SLFFALGCLLS
Trigger: GCTCAGCAAGCAGCCCAGTGCAAAGAAGAGGCTGCACTGGCAGGCTGTCACCTGGAGGACACCCAGAGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 72 bp CTGCAGTTTCCTCTGGGTGTCCTCCAGGTGACAGCCTaGCAGTGCAGCCTCTTCTTTGCACTGGGCTGCTTG +
Preference number: 3 (lower is better)
Translates to: LQFPLGVLQVTA*QCSLFFALGCL
Trigger: CAAGCAGCCCAGTGCAAAGAAGAGGCTGCACTGGCAGGCTGTCACCTGGAGGACACCCAGAGGAAACTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CCA 72 bp GGGAAGGAGAGGAAGGACGGGTTGTGTTGGGGCTGCTaGCTCTGGTTGGTTCCCTGTCCTTTTCGCCACTCA +
Preference number: 3 (lower is better)
Translates to: GKERKDGLCWGC*LWLVPCPFRHS
Trigger: TGAGTGGCGAAAAGGACAGGGAACCAACCAGAGCCAGCAGCCCCAACACAACCCGTCCTTCCTCTCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR TCA 72 bp AGGAACCCGGGCAGTGGGGCATCCCGATGTACTTGGTaGGGTCCATTCTTTGACCCATATCCTGGGGCAACC +
Preference number: 3 (lower is better)
Translates to: RNPGSGASRCTW*GPFFDPYPGAT
Trigger: GGTTGCCCCAGGATATGGGTCAAAGAATGGACCTCACCAAGTACATCGGGATGCCCCACTGCCCGGGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 72 bp AGCTTTTGGGTCTCGGTGAACTCCAGCTGCAGCTCCTaGAGCCGGCACTGCAGGATGGTGATGTCCTTATCC +
Preference number: 3 (lower is better)
Translates to: SFWVSVNSSCSS*SRHCRMVMSLS
Trigger: GGATAAGGACATCACCATCCTGCAGTGCCGGCTGCAGGAGCTGCAGCTGGAGTTCACCGAGACCCAAAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 72 bp TCTTCGAGACTGTTCTTCAGCTTCTGGACCTCAGCCTaGAGGGCCTTGCACTCCGCCTCCTTGGACTTGTCC +
Preference number: 3 (lower is better)
Translates to: SSRLFFSFWTSA*RALHSASLDLS
Trigger: GGACAAGTCCAAGGAGGCGGAGTGCAAGGCCCTGCAGGCTGAGGTCCAGAAGCTGAAGAACAGTCTCGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 72 bp TGCCGCACACTTTCTCCCTCTGTGTGGACTCCGTTCTaGTCGGGCCTAGGGCTTTGGTGCATAGCCTTGTGT +
Preference number: 3 (lower is better)
Translates to: CRTLSPSVWTPF*SGLGLWCIALC
Trigger: ACACAAGGCTATGCACCAAAGCCCTAGGCCCGAGCAGAACGGAGTCCACACAGAGGGAGAAAGTGTGCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CCA 72 bp GCCAGGCAGCTCTGCTGCAGGGTGACTTCTTGCCTCTaGGGTAACATGGAGTTTACAGGTGGCAGGAAAGGC +
Preference number: 3 (lower is better)
Translates to: ARQLCCRVTSCL*GNMEFTGGRKG
Trigger: GCCTTTCCTGCCACCTGTAAACTCCATGTTACCCCAGAGGCAAGAAGTCACCCTGCAGCAGAGCTGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537465.5
3UTR-3UTR CAA 90 bp ACTTTCTCCCTCTGTGTGGACTCCGTTCTGCTCGGGCCTAGGGCTTTGGTGCATGAGGTCATTCTGGTGTaGCTTCTGCCACTGCAGCAC +
Preference number: 3 (lower is better)
Translates to: TFSLCVDSVLLGPRALVHEVILV*LLPLQH
Trigger: GTGCTGCAGTGGCAGAAGCAACACCAGAATGACCTC...ATGCACCAAAGCCCTAGGCCCGAGCAGAACGGAGTCCACACAGAGGGAGAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 72 bp TTCAAAGTGAGCTTTTGGGTCTCGGTGAACTCCAGCTaGAGCTCCTGCAGCCGGCACTGCAGGATGGTGATG +
Preference number: 3 (lower is better)
Translates to: FKVSFWVSVNSS*SSCSRHCRMVM
Trigger: CATCACCATCCTGCAGTGCCGGCTGCAGGAGCTGCAGCTGGAGTTCACCGAGACCCAAAAGCTCACTTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CCA 72 bp GCCTCTAGTTCCACGCGCAGATCCTTCACCAGGTTCTaGTACTCCTCCACATGCAGGCACTGGCTGTCTTTC +
Preference number: 3 (lower is better)
Translates to: ASSSTRRSFTRF*YSSTCRHWLSF
Trigger: GAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACTAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CCA 72 bp TGCTCCTCTTTGGCTGCCAGCATCTTGAGGTCATTCTaGTGTTGCTTCTGCCACTGCAGCACCTGGCAGCTC +
Preference number: 3 (lower is better)
Translates to: CSSLAASILRSF*CCFCHCSTWQL
Trigger: GAGCTGCCAGGTGCTGCAGTGGCAGAAGCAACACCAGAATGACCTCAAGATGCTGGCAGCCAAAGAGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CAA 90 bp TGTGTTGGGGCTGCTGGCTCTGGTTGGTTCCCTGTCCTTTTCGCCACTCAGCTTGGTCTGTGTCAAGCTTaGCTGCAGGCTCTTTGTCTC +
Preference number: 3 (lower is better)
Translates to: CVGAAGSGWFPVLFATQLGLCQA*LQALCL
Trigger: GAGACAAAGAGCCTGCAGCAAAGCTTGACACAGACC...AAGCTGAGTGGCGAAAAGGACAGGGAACCAACCAGAGCCAGCAGCCCCAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 72 bp TCTTTGGCTGCCAGCATCTTGAGGTCATTCTGGTGTTaGTTCTGCCACTGCAGCACCTGGCAGCTCATCTCC +
Preference number: 3 (lower is better)
Translates to: SLAASILRSFWC*FCHCSTWQLIS
Trigger: GGAGATGAGCTGCCAGGTGCTGCAGTGGCAGAAGCAACACCAGAATGACCTCAAGATGCTGGCAGCCAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 72 bp GCTGTGGGTGAGGGCACGGTGTTTCCTGATCTCTCCTaGTGTGTCTCCAGGTCTACGAAGATCTACACTCCA +
Preference number: 3 (lower is better)
Translates to: AVGEGTVFPDLS*CVSRSTKIYTP
Trigger: TGGAGTGTAGATCTTCGTAGACCTGGAGACACAGCAGGAGAGATCAGGAAACACCGTGCCCTCACCCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR GCA 72 bp TGCAGGGCCTTGCACTCCGCCTCCTTGGACTTGTCCTaGTTAGCCTCCTTGACTGTCATTTCAAGTTCTGTG +
Preference number: 3 (lower is better)
Translates to: CRALHSASLDLS*LASLTVISSSV
Trigger: CACAGAACTTGAAATGACAGTCAAGGAGGCTAAGCAGGACAAGTCCAAGGAGGCGGAGTGCAAGGCCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 72 bp GTGTGGACTCCGTTCTGCTCGGGCCTAGGGCTTTGGTaGATAGCCTTGTGTTCTCGGCTTTCATCTTCTTCT +
Preference number: 3 (lower is better)
Translates to: VWTPFCSGLGLW*IALCSRLSSSS
Trigger: AGAAGAAGATGAAAGCCGAGAACACAAGGCTATGCACCAAAGCCCTAGGCCCGAGCAGAACGGAGTCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CCA 72 bp AGGTCATTCTGGTGTTGCTTCTGCCACTGCAGCACCTaGCAGCTCATCTCCTCTAGCTTCTTGTCAAAGGCG +
Preference number: 3 (lower is better)
Translates to: RSFWCCFCHCST*QLISSSFLSKA
Trigger: CGCCTTTGACAAGAAGCTAGAGGAGATGAGCTGCCAGGTGCTGCAGTGGCAGAAGCAACACCAGAATGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 72 bp AGTTCTCTCTGTAGTTCCTGGATGGTGTCTGCCTTCTaGTTGTCCAGGAGGAGACCCTTCTGCAGTTTCCTC +
Preference number: 3 (lower is better)
Translates to: SSLCSSWMVSAF*LSRRRPFCSFL
Trigger: GAGGAAACTGCAGAAGGGTCTCCTCCTGGACAAGCAGAAGGCAGACACCATCCAGGAACTACAGAGAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 72 bp AGCATCTTGAGGTCATTCTGGTGTTGCTTCTGCCACTaGAGCACCTGGCAGCTCATCTCCTCTAGCTTCTTG +
Preference number: 3 (lower is better)
Translates to: SILRSFWCCFCH*STWQLISSSFL
Trigger: CAAGAAGCTAGAGGAGATGAGCTGCCAGGTGCTGCAGTGGCAGAAGCAACACCAGAATGACCTCAAGATGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CCA 72 bp TTCACCAGGTTCTGGTACTCCTCCACATGCAGGCACTaGCTGTCTTTCTGCTCCTGCAAGTGCTTCAGTATC +
Preference number: 3 (lower is better)
Translates to: FTRFWYSSTCRH*LSFCSCKCFSI
Trigger: GATACTGAAGCACTTGCAGGAGCAGAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCAGAACCTGGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CCA 72 bp TCTGCAGCATCTGAAGTTCTCTCTGTAGTTCCTGGATaGTGTCTGCCTTCTGCTTGTCCAGGAGGAGACCCT +
Preference number: 3 (lower is better)
Translates to: SAASEVLSVVPG*CLPSACPGGDP
Trigger: AGGGTCTCCTCCTGGACAAGCAGAAGGCAGACACCATCCAGGAACTACAGAGAGAACTTCAGATGCTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CCA 72 bp CTCTGGTTGGTTCCCTGTCCTTTTCGCCACTCAGCTTaGCAATGTATTTCACCTGCTCTCGGAGCTGGTTTC +
Preference number: 3 (lower is better)
Translates to: LWLVPCPFRHSA*QCISPALGAGF
Trigger: GAAACCAGCTCCGAGAGCAGGTGAAATACATTGCCAAGCTGAGTGGCGAAAAGGACAGGGAACCAACCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CAA 90 bp AGTTCCACGCGCAGATCCTTCACCAGGTTCTGGTACTCCTCCACATGCAGGCACAATGAGATCATCCTGTaGAGAGACCTTTTGCCAGAC +
Preference number: 3 (lower is better)
Translates to: SSTRRSFTRFWYSSTCRHNEIIL*RDLLPD
Trigger: GTCTGGCAAAAGGTCTCTCAACAGGATGATCTCATT...GTGCCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CAA 90 bp TGGGGCAACCCCTTCCAGCCCAAGGTGCCGCACACTTTCTCCCTCTGTGTGGACCTTATTTCGAAGTTCTaGAATGAGATCATCCTGTTG +
Preference number: 3 (lower is better)
Translates to: WGNPFQPKVPHTFSLCVDLISKF*NEIILL
Trigger: CAACAGGATGATCTCATTCAAGAACTTCGAAATAAG...GTCCACACAGAGGGAGAAAGTGTGCGGCACCTTGGGCTGGAAGGGGTTGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CAA 90 bp ACTTTCTCCCTCTGTGTGGACTCCGTTCTGCTCGGGCCTAGGGCTTTGGTGCATTTTTCTGTTGGAGGTTaGTTCCTTCTCAGCCATCGA +
Preference number: 3 (lower is better)
Translates to: TFSLCVDSVLLGPRALVHFSVGG*FLLSHR
Trigger: TCGATGGCTGAGAAGGAACAAACCTCCAACAGAAAA...ATGCACCAAAGCCCTAGGCCCGAGCAGAACGGAGTCCACACAGAGGGAGAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CAA 90 bp TTTAAGGCGGCCATCTCCTCCTGGAACTCCCTGAGCTGCTCCTCTTTGGCTGCCAGATCTTCTTCTAACTaGCATTTGATGGAGCCTTGC +
Preference number: 3 (lower is better)
Translates to: FKAAISSWNSLSCSSLAARSSSN*HLMEPC
Trigger: GCAAGGCTCCATCAAATGCAAGTTAGAAGAAGATCT...GGCAGCCAAAGAGGAGCAGCTCAGGGAGTTCCAGGAGGAGATGGCCGCCTTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CAA 90 bp ACTTTCTCCCTCTGTGTGGACTCCGTTCTGCTCGGGCCTAGGGCTTTGGTGCATCTCTTTATTCAAGTCTaGGATGACTTGCTGGCTGGT +
Preference number: 3 (lower is better)
Translates to: TFSLCVDSVLLGPRALVHLFIQV*DDLLAG
Trigger: ACCAGCCAGCAAGTCATCCAAGACTTGAATAAAGAG...ATGCACCAAAGCCCTAGGCCCGAGCAGAACGGAGTCCACACAGAGGGAGAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CAA 90 bp TCTGAGTCTCCTGATGCTCTTGAATCATGCAAGGAGAAGTGTATATCCGTACCTTCTAGAGAGGCGATCTaGTCCCCGGCCAAGGCGAGT +
Preference number: 3 (lower is better)
Translates to: SESPDALESCKEKCISVPSREAI*SPAKAS
Trigger: ACTCGCCTTGGCCGGGGACAAGATCGCCTCTCTAGA...AGGTACGGATATACACTTCTCCTTGCATGATTCAAGAGCATCAGGAGACTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CAA 90 bp CCATTGCTCCAAGTTGGTCATAATCTGATCATTCCCTCGGTAGAGCCTACAGGTGCATTTGATGGAGCCTaGCTCCCTGTGCTGGTGCTT +
Preference number: 3 (lower is better)
Translates to: PLLQVGHNLIIPSVEPTGAFDGA*LPVLVL
Trigger: AAGCACCAGCACAGGGAGCAAGGCTCCATCAAATGC...ACCTGTAGGCTCTACCGAGGGAATGATCAGATTATGACCAACTTGGAGCAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CAA 90 bp CAGCATCTTGAGGTCATTCTGGTGTTGCTTCTGCCACTGCAGCACCTGGCAGCTACTTGCTGGCTGGTGTaGTATTTGTTGAGAGAGGAT +
Preference number: 3 (lower is better)
Translates to: QHLEVILVLLLPLQHLAATCWLV*YLLRED
Trigger: ATCCTCTCTCAACAAATACAACACCAGCCAGCAAGT...AGCTGCCAGGTGCTGCAGTGGCAGAAGCAACACCAGAATGACCTCAAGATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 72 bp GGTGCTCTTACGGGGTTTCCAGACGTAGAAGGAAGATaGCTCTTCTACCTGTTCCCTAAAATGGGTCTGGGT +
Preference number: 3 (lower is better)
Translates to: GALTGFPDVEGR*LFYLFPKMGLG
Trigger: ACCCAGACCCATTTTAGGGAACAGGTAGAAGAGGCATCTTCCTTCTACGTCTGGAAACCCCGTAAGAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
3UTR-3UTR CAA 90 bp TTTAAGGCGGCCATCTCCTCCTGGAACTCCCTGAGCTGCTCCTCTTTGGCTGCCTGCTTCAGTATCTTTTaGATGTCTTCACACTCTTCT +
Preference number: 3 (lower is better)
Translates to: FKAAISSWNSLSCSSLAACFSIF*MSSHSS
Trigger: AGAAGAGTGTGAAGACATCAAAAAGATACTGAAGCA...GGCAGCCAAAGAGGAGCAGCTCAGGGAGTTCCAGGAGGAGATGGCCGCCTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CAA 90 bp TTCCTGCCGCAAAGCTTCAAGTTCTCCCTCCATCAGCTTCTCATGCTCTTTGCTTTCAACTGCTCCCGTTaGTCCTCCAGAAGCTTTGTG +
Preference number: 3 (lower is better)
Translates to: FLPQSFKFSLHQLLMLFAFNCSR*SSRSFV
Trigger: CACAAAGCTTCTGGAGGACAAACGGGAGCAGTTGAA...AGCAAAGAGCATGAGAAGCTGATGGAGGGAGAACTTGAAGCTTTGCGGCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CAA 90 bp CCATTGCTCCAAGTTGGTCATAATCTGATCATTCCCTCGGTAGAGCCTACAGGTATCTCCTCTAGCTTCTaGTCAAAGGCGTGCACCTCC +
Preference number: 3 (lower is better)
Translates to: PLLQVGHNLIIPSVEPTGISSSF*SKACTS
Trigger: GGAGGTGCACGCCTTTGACAAGAAGCTAGAGGAGAT...ACCTGTAGGCTCTACCGAGGGAATGATCAGATTATGACCAACTTGGAGCAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR TCA 72 bp TCCGATCTAAAGCATATCGGAATGAGTGAGCTTCCTTaGTTACATCGCCAGTCGAACATGGGGACGGCAGAG +
Preference number: 3 (lower is better)
Translates to: SDLKHIGMSELP*LHRQSNMGTAE
Trigger: CTCTGCCGTCCCCATGTTCGACTGGCGATGTAATCAAGGAAGCTCACTCATTCCGATATGCTTTAGATCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR GCA 72 bp TCCTTTTCGCCACTCAGCTTGGCAATGTATTTCACCTaGTCTCGGAGCTGGTTTCCTAGTTTCTCATTGGCG +
Preference number: 3 (lower is better)
Translates to: SFSPLSLAMYFT*SRSWFPSFSLA
Trigger: CGCCAATGAGAAACTAGGAAACCAGCTCCGAGAGCAGGTGAAATACATTGCCAAGCTGAGTGGCGAAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CCA 72 bp AACATTGGAAGACTTGATGCCAAAGCCCAAATAGCTTaGGGCTCCACCAGATATGAGATGAGACCTTCCACA +
Preference number: 3 (lower is better)
Translates to: NIGRLDAKAQIA*GSTRYEMRPST
Trigger: TGTGGAAGGTCTCATCTCATATCTGGTGGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCCAATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537392.1
3UTR-3UTR CAA 90 bp TGCATCATAGGCTTCTTTGGTGATGGTAGTCTGGAGATAGTGCTTCTCCTTCTGTCTAGTAACTCGATGTaGCTCAGGGAAGACTGGTAT +
Preference number: 3 (lower is better)
Translates to: CIIGFFGDGSLEIVLLLLSSNSM*LREDWY
Trigger: ATACCAGTCTTCCCTGAGCAACATCGAGTTACTAGA...CAGAAGGAGAAGCACTATCTCCAGACTACCATCACCAAAGAAGCCTATGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CAA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTACTGTTGAGAGACCTTTaGCCAGACTTCAGACAGTCG +
Preference number: 3 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLLLRDL*PDFRQS
Trigger: CGACTGTCTGAAGTCTGGCAAAAGGTCTCTCAACAG...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CAA 90 bp CCATTGCTCCAAGTTGGTCATAATCTGATCATTCCCTCGGTAGAGCCTACAGGTCTGGTGTTGTATTTGTaGAGAGAGGATTCCAGTTGT +
Preference number: 3 (lower is better)
Translates to: PLLQVGHNLIIPSVEPTGLVLYL*REDSSC
Trigger: ACAACTGGAATCCTCTCTCAACAAATACAACACCAG...ACCTGTAGGCTCTACCGAGGGAATGATCAGATTATGACCAACTTGGAGCAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CAA 90 bp TGCATCATAGGCTTCTTTGGTGATGGTAGTCTGGAGATAGTGCTTCTCCTTCTGCAAGTCTTGGATGACTaGCTGGCTGGTGTTGTATTT +
Preference number: 3 (lower is better)
Translates to: CIIGFFGDGSLEIVLLLLQVLDD*LAGVVF
Trigger: AAATACAACACCAGCCAGCAAGTCATCCAAGACTTG...CAGAAGGAGAAGCACTATCTCCAGACTACCATCACCAAAGAAGCCTATGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR TCA 72 bp TGCCAAAGCCCAAATAGCTTGGGGCTCCACCAGATATaGGATGAGACCTTCCACATATGGAAGAAACATTTC +
Preference number: 3 (lower is better)
Translates to: CQSPNSLGLHQI*DETFHIWKKHF
Trigger: GAAATGTTTCTTCCATATGTGGAAGGTCTCATCTCATATCTGGTGGAGCCCCAAGCTATTTGGGCTTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
3UTR TCA 72 bp ACAAAAGTTAGTGTCTTGCAAAATAGGCTGGGACCGTaGTATACTCCTGTAAGAGCTGATCCAGGTCAAGAG +
Preference number: 3 (lower is better)
Translates to: TKVSVLQNRLGP*YTPVRADPGQE
Trigger: CTCTTGACCTGGATCAGCTCTTACAGGAGTATATCACGGTCCCAGCCTATTTTGCAAGACACTAACTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
3UTR TCA 72 bp TTGAATCATGCAAGGAGAAGTGTATATCCGTACCTTTaGATGATCACCCTTGTTCTCAGGCTCCTGACCCAT +
Preference number: 3 (lower is better)
Translates to: LNHARRSVYPYL*MITLVLRLLTH
Trigger: ATGGGTCAGGAGCCTGAGAACAAGGGTGATCATTCAAAGGTACGGATATACACTTCTCCTTGCATGATTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR TCA 72 bp CGTTACTGCAGGCCAGCTTATTTCGAAGTTCTTGAATaGGATCATCCTGTTGAGAGACCTTTTGCCAGACTT +
Preference number: 3 (lower is better)
Translates to: RYCRPAYFEVLE*DHPVERPFARL
Trigger: AAGTCTGGCAAAAGGTCTCTCAACAGGATGATCTCATTCAAGAACTTCGAAATAAGCTGGCCTGCAGTAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR GCA 72 bp GCAACATCTTCACTTGGCATTCTAGTAACTCGATGTTaGTCAGGGAAGACTGGTATTTATCCCTGTAGAGGT +
Preference number: 3 (lower is better)
Translates to: ATSSLGILVTRC*SGKTGIYPCRG
Trigger: ACCTCTACAGGGATAAATACCAGTCTTCCCTGAGCAACATCGAGTTACTAGAATGCCAAGTGAAGATGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CCA 72 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATaGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTG +
Preference number: 3 (lower is better)
Translates to: PGDGSMVLKLTP*QEVDKTQQKLV
Trigger: CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
3UTR-3UTR CAA 90 bp TGCATCATAGGCTTCTTTGGTGATGGTAGTCTGGAGATAGTGCTTCTCCTTCTGTGTATATCCGTACCTTaGAATGATCACCCTTGTTCT +
Preference number: 3 (lower is better)
Translates to: CIIGFFGDGSLEIVLLLLCISVP*NDHPCS
Trigger: AGAACAAGGGTGATCATTCAAAGGTACGGATATACA...CAGAAGGAGAAGCACTATCTCCAGACTACCATCACCAAAGAAGCCTATGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR-3UTR CAA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAGTCTCCTGATGCTCTaGAATCATGCAAGGAGAAGT +
Preference number: 3 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLSLLML*NHARRS
Trigger: ACTTCTCCTTGCATGATTCAAGAGCATCAGGAGACT...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR TCA 72 bp GTTGTTAAAATCCGATCTAAAGCATATCGGAATGAGTaGGCTTCCTTGATTACATCGCCAGTCGAACATGGG +
Preference number: 3 (lower is better)
Translates to: VVKIRSKAYRNE*ASLITSPVEHG
Trigger: CCCATGTTCGACTGGCGATGTAATCAAGGAAGCTCACTCATTCCGATATGCTTTAGATCGGATTTTAACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537792.5
3UTR-3UTR CAA 90 bp AGGGAGGAAATGAGAGTTTTGATTCGAGGAGAAATTAACGAGGTGATTCCTCAAAGAAGGGGTCTTAATTaGCCTCCTCCCTTTACAGAT +
Preference number: 3 (lower is better)
Translates to: REEMRVLIRGEINEVIPQRRGLN*PPPFTD
Trigger: ATCTGTAAAGGGAGGAGGCAAATTAAGACCCCTTCT...TTGAGGAATCACCTCGTTAATTTCTCCTCGAATCAAAACTCTCATTTCCTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
3UTR GCA 72 bp ACAGTCGTTTCTGAGTCTCCTGATGCTCTTGAATCATaGAAGGAGAAGTGTATATCCGTACCTTTGAATGAT +
Preference number: 3 (lower is better)
Translates to: TVVSESPDALES*KEKCISVPLND
Trigger: ATCATTCAAAGGTACGGATATACACTTCTCCTTGCATGATTCAAGAGCATCAGGAGACTCAGAAACGACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp GGCATGGCGGGAGCGGGGCTGCAGAGTATCCGAGGTGCTGCCGGGGCAGCGGGAGCAGAGTATCCGAGGTaGTGCCGGGGCAGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GMAGAGLQSIRGAAGAAGAEYPR*CRGSGR
Trigger: CCTCCCGCTGCCCCGGCAGCACCTCGGATACTCTGC...TCCCGCTGCCCCGGCAGCACCTCGGATACTCTGCAGCCCCGCTCCCGCCATGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR TCA 90 bp AGGCCGGAAAGAGCAAGGGGAGCCCATGACCCCTCGCCGCACGCCAGCCCGCTTAGCAAGGGGAGCCCATaGCCCCTCGCCGCACGCCAG +
Preference number: 4 (lower is better)
Translates to: RPERARGAHDPSPHASPLSKGSP*PLAARQ
Trigger: CTGGCGTGCGGCGAGGGGTCATGGGCTCCCCTTGCT...AAGCGGGCTGGCGTGCGGCGAGGGGTCATGGGCTCCCCTTGCTCTTTCCGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR CCA 90 bp CGGCATGGCGGGAGCGGGGCTGCAGAGTATCCGAGGTGCTGCCGGGGCAGCGGGGCCTACAGGTGTCTTTaGGCACAGACCACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RHGGSGAAEYPRCCRGSGAYRCL*AQTTGA
Trigger: TGCCCCAGTGGTCTGTGCCCAAAGACACCTGTAGGC...CCCGCTGCCCCGGCAGCACCTCGGATACTCTGCAGCCCCGCTCCCGCCATGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR GCA 90 bp TCCAGGCCGGAAAGAGCAAGGGGAGCCCATGACCCCTCGCCGCACGCCAGCCCGAGAGGAGTGAGAATGTaGCGGGGAGGAGATCCCTCG +
Preference number: 4 (lower is better)
Translates to: SRPERARGAHDPSPHASPRGVRM*RGGDPS
Trigger: CGAGGGATCTCCTCCCCGGCACATTCTCACTCCTCT...CGGGCTGGCGTGCGGCGAGGGGTCATGGGCTCCCCTTGCTCTTTCCGGCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR CCA 90 bp CCCCACCATGGGTTAGGAACAGTAAGTCCTGGGGCTCTGCATCCTCCTGCCCTCTGCAGGAGCACGGCATaGCGGGAGCGGGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PHHGLGTVSPGALHPPALCRSTA*RERGCR
Trigger: TCTGCAGCCCCGCTCCCGCCATGCCGTGCTCCTGCA...GAGGGCAGGAGGATGCAGAGCCCCAGGACTTACTGTTCCTAACCCATGGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR CCA 90 bp CGGAAAGAGCAAGGGGAGCCCATGACCCCTCGCCGCACGCCAGCCCGCTTTGGTATCGCCAGTCGAACATaGGGACGGCAGAGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: RKEQGEPMTPRRTPARFGIASRT*GRQRSE
Trigger: CTCACTCCTCTGCCGTCCCCATGTTCGACTGGCGAT...ACCAAAGCGGGCTGGCGTGCGGCGAGGGGTCATGGGCTCCCCTTGCTCTTTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR TCA 90 bp AGGCTGTCCCCAGAGAGGATGGCAGCAGGTATTGGGTCCTCAGCCTTCTGGCGGGCCCGCTTTGGTCTGTaGGCTGAGGCTGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: RLSPERMAAGIGSSAFWRARFGL*AEAVPR
Trigger: TCTGGGGACAGCCTCAGCTCACAGACCAAAGCGGGC...CCGCCAGAAGGCTGAGGACCCAATACCTGCTGCCATCCTCTCTGGGGACAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR GCA 90 bp ACATCGCCAGTCGAACATGGGGACGGCAGAGGAGTGAGAATGTGCCGGGGAGGATGGCGGGAGCGGGGCTaGAGAGTATCCGAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TSPVEHGDGRGVRMCRGGWRERG*RVSEVL
Trigger: CAGCACCTCGGATACTCTGCAGCCCCGCTCCCGCCA...TCCTCCCCGGCACATTCTCACTCCTCTGCCGTCCCCATGTTCGACTGGCGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR CCA 90 bp TTCCTCAAGGGCTGGCCGCATGGCCAGGCAGCTCTGCTGCAGGGTGACTTCTTGGCGGCCATCTCCTCCTaGAACTCCCTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FLKGWPHGQAALLQGDFLAAISS*NSLSCS
Trigger: GGAGCAGCTCAGGGAGTTCCAGGAGGAGATGGCCGC...CAAGAAGTCACCCTGCAGCAGAGCTGCCTGGCCATGCGGCCAGCCCTTGAGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CCA 90 bp CTCGCCGCACGCCAGCCCGCTTTGGTCTGTGAGCTGAGGCTGTCCCCAGAGAGGAGGAACAGTAAGTCCTaGGGCTCTGCATCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LAARQPALVCELRLSPERRNSKS*GSASSC
Trigger: GCAGGAGGATGCAGAGCCCCAGGACTTACTGTTCCT...CCTCTCTGGGGACAGCCTCAGCTCACAGACCAAAGCGGGCTGGCGTGCGGCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR GCA 90 bp GGCTGGCCGCATGGCCAGGCAGCTCTGCTGCAGGGTGACTTCTTGCCTCTGGGGTGCAGGGTGACTTCTTaGCTCTGGGGTAACATGGAG +
Preference number: 4 (lower is better)
Translates to: GWPHGQAALLQGDFLPLGCRVTS*LWGNME
Trigger: CTCCATGTTACCCCAGAGGCAAGAAGTCACCCTGCA...CCCCAGAGGCAAGAAGTCACCCTGCAGCAGAGCTGCCTGGCCATGCGGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR GCA 90 bp CGGAAAGAGCAAGGGGAGCCCATGACCCCTCGCCGCACGCCAGCCCGCTTTGGTAGGACACTTGGTGTATaGGTGACTTGGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RKEQGEPMTPRRTPARFGRTLGV*VTWLWL
Trigger: CAGCCACAGCCAAGTCACGCATACACCAAGTGTCCT...ACCAAAGCGGGCTGGCGTGCGGCGAGGGGTCATGGGCTCCCCTTGCTCTTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR CCA 90 bp GGCTGGCCGCATGGCCAGGCAGCTCTGCTGCAGGGTGACTTCTTGCCTCTGGGGGCTTGCTTCTTGTCGTaGCTGCTGTTCATTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GWPHGQAALLQGDFLPLGACFLS*LLFIAS
Trigger: GGAGGCAATGAACAGCAGCCACGACAAGAAGCAAGC...CCCCAGAGGCAAGAAGTCACCCTGCAGCAGAGCTGCCTGGCCATGCGGCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CCA 90 bp GGCTGGCCGCATGGCCAGGCAGCTCTGCTGCAGGGTGACTTCTTGCCTCTGGGGCCTTGCTCCCTGTGCTaGTGCTTGATACGATCAAGC +
Preference number: 4 (lower is better)
Translates to: GWPHGQAALLQGDFLPLGPCSLC*CLIRSS
Trigger: GCTTGATCGTATCAAGCACCAGCACAGGGAGCAAGG...CCCCAGAGGCAAGAAGTCACCCTGCAGCAGAGCTGCCTGGCCATGCGGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CCA 90 bp TACATCGCCAGTCGAACATGGGGACGGCAGAGGAGTGAGAATGTGCCGGGGAGGGCGGCCATCTCCTCCTaGAACTCCCTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: YIASRTWGRQRSENVPGRAAISS*NSLSCS
Trigger: GGAGCAGCTCAGGGAGTTCCAGGAGGAGATGGCCGC...CCTCCCCGGCACATTCTCACTCCTCTGCCGTCCCCATGTTCGACTGGCGATGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR TCA 90 bp GGCTGGCCGCATGGCCAGGCAGCTCTGCTGCAGGGTGACTTCTTGCCTCTGGGGTACTCCTGTAAGAGCTaGTCCAGGTCAAGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GWPHGQAALLQGDFLPLGYSCKS*SRSRER
Trigger: CCTCTCTCTTGACCTGGATCAGCTCTTACAGGAGTA...CCCCAGAGGCAAGAAGTCACCCTGCAGCAGAGCTGCCTGGCCATGCGGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR TCA 90 bp TTCCTCAAGGGCTGGCCGCATGGCCAGGCAGCTCTGCTGCAGGGTGACTTCTTGAGCTCTGCTGCAGGGTaGCTTCTTGCCTCTGGGGTA +
Preference number: 4 (lower is better)
Translates to: FLKGWPHGQAALLQGDFLSSAAG*LLASGV
Trigger: TACCCCAGAGGCAAGAAGTCACCCTGCAGCAGAGCT...CAAGAAGTCACCCTGCAGCAGAGCTGCCTGGCCATGCGGCCAGCCCTTGAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR GCA 90 bp TGTGAGCTGAGGCTGTCCCCAGAGAGGATGGCAGCAGGTATTGGGTCCTCAGCCGGTGGAGTTCTTCCATaGAGGAGCACGGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: CELRLSPERMAAGIGSSAGGVLP*RSTAWR
Trigger: CCGCCATGCCGTGCTCCTGCATGGAAGAACTCCACC...GGCTGAGGACCCAATACCTGCTGCCATCCTCTCTGGGGACAGCCTCAGCTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR CCA 90 bp AGGCCGGAAAGAGCAAGGGGAGCCCATGACCCCTCGCCGCACGCCAGCCCGCTTACCTGCTCTCGGAGCTaGTTTCCTAGTTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: RPERARGAHDPSPHASPLTCSRS*FPSFSL
Trigger: CAATGAGAAACTAGGAAACCAGCTCCGAGAGCAGGT...AAGCGGGCTGGCGTGCGGCGAGGGGTCATGGGCTCCCCTTGCTCTTTCCGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR TCA 90 bp GGTAGTCTGGAGATAGTGCTTCTCCTTCTGCAGAGCTTTGTCCAGCTGGGCCTGCAGGCTCCTGACCCATaGTCCCGCCGAGTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: GSLEIVLLLLQSFVQLGLQAPDP*SRRVPP
Trigger: AGGGGGAACTCGGCGGGATCATGGGTCAGGAGCCTG...CAGGCCCAGCTGGACAAAGCTCTGCAGAAGGAGAAGCACTATCTCCAGACTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR TCA 90 bp TCTCCTGCTGTGTCTCCAGGTCTACGAAGATCTACACTCCAGGCCGGAAAGAGCTTCTGGCGGGAGCCCTaGGGCTGCGGACAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: SPAVSPGLRRSTLQAGKSFWREP*GCGQSP
Trigger: AGGGCTTTGTCCGCAGCCTCAGGGCTCCCGCCAGAA...GCTCTTTCCGGCCTGGAGTGTAGATCTTCGTAGACCTGGAGACACAGCAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR TCA 90 bp ACATCGCCAGTCGAACATGGGGACGGCAGAGGAGTGAGAATGTGCCGGGGAGGACTTTGGTCTGTGAGCTaGGGCTGTCCCCAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: TSPVEHGDGRGVRMCRGGLWSVS*GCPQRG
Trigger: TCCTCTCTGGGGACAGCCTCAGCTCACAGACCAAAG...TCCTCCCCGGCACATTCTCACTCCTCTGCCGTCCCCATGTTCGACTGGCGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR CCA 90 bp GGCTGGCCGCATGGCCAGGCAGCTCTGCTGCAGGGTGACTTCTTGCCTCTGGGGTTTTCCTGCTGCAAGTaGACCATTACACTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GWPHGQAALLQGDFLPLGFSCCK*TITLWR
Trigger: CCTCCACAGTGTAATGGTCCACTTGCAGCAGGAAAA...CCCCAGAGGCAAGAAGTCACCCTGCAGCAGAGCTGCCTGGCCATGCGGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CCA 90 bp TGCTGTGTCTCCAGGTCTACGAAGATCTACACTCCAGGCCGGAAAGAGCAAGGGCGGGGCAGCGGGAGGTaGCTGGACCCATCGCATCTA +
Preference number: 4 (lower is better)
Translates to: CCVSRSTKIYTPGRKEQGRGSGR*LDPSHL
Trigger: TAGATGCGATGGGTCCAGCCACCTCCCGCTGCCCCG...CCCTTGCTCTTTCCGGCCTGGAGTGTAGATCTTCGTAGACCTGGAGACACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR CCA 90 bp TGTCCCCAGAGAGGATGGCAGCAGGTATTGGGTCCTCAGCCTTCTGGCGGGAGCCTGGACCAGACTCTCTaGCAGAGGAGGTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: CPQRGWQQVLGPQPSGGSLDQTL*QRRWSS
Trigger: AGAACTCCACCTCCTCTGCCAGAGAGTCTGGTCCAG...GCTCCCGCCAGAAGGCTGAGGACCCAATACCTGCTGCCATCCTCTCTGGGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR CCA 90 bp ACATCGCCAGTCGAACATGGGGACGGCAGAGGAGTGAGAATGTGCCGGGGAGGACAGGGCAGTTCCTGCTaGACCAGACTCTCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: TSPVEHGDGRGVRMCRGGQGSSC*TRLSGR
Trigger: TCTGCCAGAGAGTCTGGTCCAGCAGGAACTGCCCTG...TCCTCCCCGGCACATTCTCACTCCTCTGCCGTCCCCATGTTCGACTGGCGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR GCA 90 bp CCTTCACCAGGTTCTGGTACTCCTCCACATGCAGGCACTGGCTGTCTTTCTGCTTCCAGCTGCAGCTCCTaGAGCCGGCACTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: PSPGSGTPPHAGTGCLSASSCSS*SRHCRM
Trigger: CATCCTGCAGTGCCGGCTGCAGGAGCTGCAGCTGGA...AGCAGAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp GGTAGTCTGGAGATAGTGCTTCTCCTTCTGCAGAGCTTTGTCCAGCTGGGCCTGTTCTGGACCTCAGCCTaGAGGGCCTTGCACTCCGCC +
Preference number: 4 (lower is better)
Translates to: GSLEIVLLLLQSFVQLGLFWTSA*RALHSA
Trigger: GGCGGAGTGCAAGGCCCTGCAGGCTGAGGTCCAGAA...CAGGCCCAGCTGGACAAAGCTCTGCAGAAGGAGAAGCACTATCTCCAGACTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR GCA 90 bp CCGGAAAGAGCAAGGGGAGCCCATGACCCCTCGCCGCACGCCAGCCCGCTTTGGTGCTGTTTTGCCCATTaGTCCAAGTTGGTCATAATC +
Preference number: 4 (lower is better)
Translates to: PERARGAHDPSPHASPLWCCFAH*SKLVII
Trigger: GATTATGACCAACTTGGAGCAATGGGCAAAACAGCA...CCAAAGCGGGCTGGCGTGCGGCGAGGGGTCATGGGCTCCCCTTGCTCTTTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR GCA 90 bp TGTGTTGGGGCTGCTGGCTCTGGTTGGTTCCCTGTCCTTTTCGCCACTCAGCTTGGGTTGTGTTGGGGCTaGTGGCTCTGGTTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: CVGAAGSGWFPVLFATQLGLCWG*WLWLVP
Trigger: GGGAACCAACCAGAGCCAGCAGCCCCAACACAACCC...AAGCTGAGTGGCGAAAAGGACAGGGAACCAACCAGAGCCAGCAGCCCCAACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp TTCCTTGATTACATCGCCAGTCGAACATGGGGACGGCAGAGGAGTGAGAATGTGGAGTATCCGAGGTGCTaGCGGGGCAGCGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FLDYIASRTWGRQRSENVEYPRC*RGSGRW
Trigger: CCACCTCCCGCTGCCCCGGCAGCACCTCGGATACTC...CACATTCTCACTCCTCTGCCGTCCCCATGTTCGACTGGCGATGTAATCAAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR CCA 90 bp ACATCGCCAGTCGAACATGGGGACGGCAGAGGAGTGAGAATGTGCCGGGGAGGACTGGCCCAGGACACTTaGTGTATGCGTGACTTGGCT +
Preference number: 4 (lower is better)
Translates to: TSPVEHGDGRGVRMCRGGLAQDT*CMRDLA
Trigger: AGCCAAGTCACGCATACACCAAGTGTCCTGGGCCAG...TCCTCCCCGGCACATTCTCACTCCTCTGCCGTCCCCATGTTCGACTGGCGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR CCA 90 bp ACATCGCCAGTCGAACATGGGGACGGCAGAGGAGTGAGAATGTGCCGGGGAGGATGTCCCCAGAGAGGATaGCAGCAGGTATTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TSPVEHGDGRGVRMCRGGCPQRG*QQVLGP
Trigger: AGGACCCAATACCTGCTGCCATCCTCTCTGGGGACA...TCCTCCCCGGCACATTCTCACTCCTCTGCCGTCCCCATGTTCGACTGGCGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR CCA 90 bp AGGCTGTCCCCAGAGAGGATGGCAGCAGGTATTGGGTCCTCAGCCTTCTGGCGGCAGAGCTCCCCACCATaGGTTAGGAACAGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: RLSPERMAAGIGSSAFWRQSSPP*VRNSKS
Trigger: GGACTTACTGTTCCTAACCCATGGTGGGGAGCTCTG...CCGCCAGAAGGCTGAGGACCCAATACCTGCTGCCATCCTCTCTGGGGACAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR TCA 90 bp GGCTGGCCGCATGGCCAGGCAGCTCTGCTGCAGGGTGACTTCTTGCCTCTGGGGGTATATCCGTACCTTTaGATGATCACCCTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: GWPHGQAALLQGDFLPLGVYPYL*MITLVL
Trigger: GAGAACAAGGGTGATCATTCAAAGGTACGGATATAC...CCCCAGAGGCAAGAAGTCACCCTGCAGCAGAGCTGCCTGGCCATGCGGCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR TCA 90 bp TCGAGGGCTTGTGTCAGGTCATCCTGGCAGGCGGCTGACTTCCGGGATAATGCAGTCTCTGAGGTCACGTaGTTGAGCTTCTCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SRACVRSSWQAADFRDNAVSEVT*LSFSRA
Trigger: AGCCCTCGAGAAGCTCAATCACGTGACCTCAGAGAC...TGCATTATCCCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACAAGCCCTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR GCA 90 bp GGTCATTCTGGTGTTGCTTCTGCCACTGCAGCACCTGGCAGCTCATCTCCTCTAGCAGCCAGCCTCTCCTaGTGCTTGGCCTCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: GHSGVASATAAPGSSSPLAASLS*CLASSR
Trigger: TCTCGAAGAGGCCAAGCAGCAGGAGAGGCTGGCTGC...TAGAGGAGATGAGCTGCCAGGTGCTGCAGTGGCAGAAGCAACACCAGAATGACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp GGTAGTCTGGAGATAGTGCTTCTCCTTCTGCAGAGCTTTGTCCAGCTGGGCCTGGCAGCCAGCCTCTCCTaGTGCTTGGCCTCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: GSLEIVLLLLQSFVQLGLAASLS*CLASSR
Trigger: TCTCGAAGAGGCCAAGCAGCAGGAGAGGCTGGCTGC...CAGGCCCAGCTGGACAAAGCTCTGCAGAAGGAGAAGCACTATCTCCAGACTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR GCA 90 bp TCGAGGGCTTGTGTCAGGTCATCCTGGCAGGCGGCTGACTTCCGGGATAATGCAGTGACAGCCTGCCAGTaGAGCCTCTTCTTTGCACTG +
Preference number: 4 (lower is better)
Translates to: SRACVRSSWQAADFRDNAVTACQ*SLFFAL
Trigger: CAGTGCAAAGAAGAGGCTGCACTGGCAGGCTGTCAC...TGCATTATCCCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACAAGCCCTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR GCA 90 bp GACACGGCCTCTAGTTCCACGCGCAGATCCTTCACCAGGTTCTGGTACTCCTCCATGGTGTCTGCCTTCTaGTTGTCCAGGAGGAGACCC +
Preference number: 4 (lower is better)
Translates to: DTASSSTRRSFTRFWYSSMVSAF*LSRRRP
Trigger: GGGTCTCCTCCTGGACAAGCAGAAGGCAGACACCAT...GGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACTAGAGGCCGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp TCGAGGGCTTGTGTCAGGTCATCCTGGCAGGCGGCTGACTTCCGGGATAATGCATTGTCCAGCTGGGCCTaGAGGCTCATTAAGGACTCC +
Preference number: 4 (lower is better)
Translates to: SRACVRSSWQAADFRDNALSSWA*RLIKDS
Trigger: GGAGTCCTTAATGAGCCTGCAGGCCCAGCTGGACAA...TGCATTATCCCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACAAGCCCTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR GCA 90 bp TGTCCCCAGAGAGGATGGCAGCAGGTATTGGGTCCTCAGCCTTCTGGCGGGAGCTCATTGGCGACCTTCTaGTGTTTTGCCCATTGCTCC +
Preference number: 4 (lower is better)
Translates to: CPQRGWQQVLGPQPSGGSSLATF*CFAHCS
Trigger: GGAGCAATGGGCAAAACAGCAGAAGGTCGCCAATGA...GCTCCCGCCAGAAGGCTGAGGACCCAATACCTGCTGCCATCCTCTCTGGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR GCA 90 bp CTCTGCTGCAGGGTGACTTCTTGCCTCTGGGGTAACATGGAGTTTACAGGTGGCGTGTGGACTCCGTTCTaGTCGGGCCTAGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LCCRVTSCLWGNMEFTGGVWTPF*SGLGLW
Trigger: CCAAAGCCCTAGGCCCGAGCAGAACGGAGTCCACAC...GCCACCTGTAAACTCCATGTTACCCCAGAGGCAAGAAGTCACCCTGCAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR GCA 90 bp GGTGCTCTTACGGGGTTTCCAGACGTAGAAGGAAGATGCCTCTTCTACCTGTTCGGCTGCTTGCTGAGCTaGAGGGGCCTCACCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GALTGFPDVEGRCLFYLFGCLLS*RGLTSQ
Trigger: CTGGCTGGTGAGGCCCCTGCAGCTCAGCAAGCAGCC...GAACAGGTAGAAGAGGCATCTTCCTTCTACGTCTGGAAACCCCGTAAGAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR GCA 90 bp GAAGATCTACACTCCAGGCCGGAAAGAGCAAGGGGAGCCCATGACCCCTCGCCGTTTCCTGATCTCTCCTaGTGTGTCTCCAGGTCTACG +
Preference number: 4 (lower is better)
Translates to: EDLHSRPERARGAHDPSPFPDLS*CVSRST
Trigger: CGTAGACCTGGAGACACAGCAGGAGAGATCAGGAAA...CGGCGAGGGGTCATGGGCTCCCCTTGCTCTTTCCGGCCTGGAGTGTAGATCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR CCA 90 bp TTTAAGGCGGCCATCTCCTCCTGGAACTCCCTGAGCTGCTCCTCTTTGGCTGCCGCCTCTCCTGCTGCTTaGCCTCTTCGAGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: FKAAISSWNSLSCSSLAAASPAA*PLRDCS
Trigger: AGAACAGTCTCGAAGAGGCCAAGCAGCAGGAGAGGC...GGCAGCCAAAGAGGAGCAGCTCAGGGAGTTCCAGGAGGAGATGGCCGCCTTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CCA 90 bp GGTCATTCTGGTGTTGCTTCTGCCACTGCAGCACCTGGCAGCTCATCTCCTCTATGTGTCAGGTCATCCTaGCAGGCGGCTGACTTCCGG +
Preference number: 4 (lower is better)
Translates to: GHSGVASATAAPGSSSPLCVRSS*QAADFR
Trigger: CCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACA...TAGAGGAGATGAGCTGCCAGGTGCTGCAGTGGCAGAAGCAACACCAGAATGACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CCA 90 bp GGACGGCAGAGGAGTGAGAATGTGCCGGGGAGGAGATCCCTCGGCCCAGAGCTCTTTCGCCACTCAGCTTaGCAATGTATTTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: GRQRSENVPGRRSLGPELFRHSA*QCISPA
Trigger: AGCAGGTGAAATACATTGCCAAGCTGAGTGGCGAAA...GAGCTCTGGGCCGAGGGATCTCCTCCCCGGCACATTCTCACTCCTCTGCCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR CCA 90 bp CCTTCACCAGGTTCTGGTACTCCTCCACATGCAGGCACTGGCTGTCTTTCTGCTGAGGAACCCGGGCAGTaGGGCATCCCGATGTACTTG +
Preference number: 4 (lower is better)
Translates to: PSPGSGTPPHAGTGCLSAEEPGQ*GIPMYL
Trigger: CAAGTACATCGGGATGCCCCACTGCCCGGGTTCCTC...AGCAGAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CAA 72 bp TGGACCTCAGCCTGCAGGGCCTTGCACTCCGCCTCCTaGGACTTGTCCTGCTTAGCCTCCTTGACTGTCATT +
Preference number: 4 (lower is better)
Translates to: WTSACRALHSAS*DLSCLASLTVI
Trigger: AATGACAGTCAAGGAGGCTAAGCAGGACAAGTCCAAGGAGGCGGAGTGCAAGGCCCTGCAGGCTGAGGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp TTCCTCAAGGGCTGGCCGCATGGCCAGGCAGCTCTGCTGCAGGGTGACTTCTTGTCTTTCAGTTTGCAGTaGTGGTGCAGAAGAACCAGG +
Preference number: 4 (lower is better)
Translates to: FLKGWPHGQAALLQGDFLSFSLQ*WCRRTR
Trigger: CCTGGTTCTTCTGCACCATCACTGCAAACTGAAAGA...CAAGAAGTCACCCTGCAGCAGAGCTGCCTGGCCATGCGGCCAGCCCTTGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR TCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGCAGGCTCCTGACCCATaGTCCCGCCGAGTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVQAPDP*SRRVPP
Trigger: AGGGGGAACTCGGCGGGATCATGGGTCAGGAGCCTG...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp CCTTCACCAGGTTCTGGTACTCCTCCACATGCAGGCACTGGCTGTCTTTCTGCTGCTTTTGGGTCTCGGTaGACTCCAGCTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PSPGSGTPPHAGTGCLSAAFGSR*TPAAAP
Trigger: AGGAGCTGCAGCTGGAGTTCACCGAGACCCAAAAGC...AGCAGAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp CTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTCACTGGGCTGCTTGCTaGGCAGCCAGCCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LKKHPWKCCSGLDVDSSSHWAAC*AASLSC
Trigger: GCAGGAGAGGCTGGCTGCTCAGCAAGCAGCCCAGTG...ACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp TCTGCCACTGCAGCACCTGGCAGCTCATCTCCTCTAGCTTCTTGTCAAAGGCGTTGGATTCTAGCAGTATaGGGAACCCGGGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SATAAPGSSSPLASCQRRWILAV*GTRAVG
Trigger: CCCCACTGCCCGGGTTCCTCATACTGCTAGAATCCA...ACGCCTTTGACAAGAAGCTAGAGGAGATGAGCTGCCAGGTGCTGCAGTGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp TTTAAGGCGGCCATCTCCTCCTGGAACTCCCTGAGCTGCTCCTCTTTGGCTGCCGCTACATGTCCTTTATaGGTCAGCTGGGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: FKAAISSWNSLSCSSLAAATCPL*VSWGSA
Trigger: AGCAGAGCCCCAGCTGACTCATAAAGGACATGTAGC...GGCAGCCAAAGAGGAGCAGCTCAGGGAGTTCCAGGAGGAGATGGCCGCCTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp GGCGGGAGCCCTGAGGCTGCGGACAAAGCCCTTTCATCTGAGGACTTTCATCTGCACTTGGTGTATGCGTaGCTTGGCTGTGGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GGSPEAADKALSSEDFHLHLVYA*LGCGCL
Trigger: AAGACAGCCACAGCCAAGTCACGCATACACCAAGTG...CAGATGAAAGTCCTCAGATGAAAGGGCTTTGTCCGCAGCCTCAGGGCTCCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR GCA 90 bp AGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTAGAGCTTCCAGCTGCAGCTCCTaGAGCCGGCACTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: RNISLAQQPGANGEGSRASSCSS*SRHCRM
Trigger: CATCCTGCAGTGCCGGCTGCAGGAGCTGCAGCTGGA...AGCTCTACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR GCA 90 bp CCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCTCGGTGAACTCCAGCTaGAGCTCCTGCAGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: PLKKHPWKCCSGLDVDSSSVNSS*SSCSRH
Trigger: GTGCCGGCTGCAGGAGCTGCAGCTGGAGTTCACCGA...GCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp AGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTAGAGCTTCGGTGAACTCCAGCTaGAGCTCCTGCAGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: RNISLAQQPGANGEGSRASVNSS*SSCSRH
Trigger: GTGCCGGCTGCAGGAGCTGCAGCTGGAGTTCACCGA...AGCTCTACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR GCA 90 bp CCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCTTCTGGACCTCAGCCTaGAGGGCCTTGCACTCCGCC +
Preference number: 4 (lower is better)
Translates to: PLKKHPWKCCSGLDVDSSFWTSA*RALHSA
Trigger: GGCGGAGTGCAAGGCCCTGCAGGCTGAGGTCCAGAA...GCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp AGTTCCACGCGCAGATCCTTCACCAGGTTCTGGTACTCCTCCACATGCAGGCACTTCTTTGCACTGGGCTaGTTGCTGAGCAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SSTRRSFTRFWYSSTCRHFFALG*LLSSQP
Trigger: AGGCTGGCTGCTCAGCAAGCAGCCCAGTGCAAAGAA...GTGCCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp TCGAGGGCTTGTGTCAGGTCATCCTGGCAGGCGGCTGACTTCCGGGATAATGCAGAGCCTTGCTCCCTGTaGTGGTGCTTGATACGATCA +
Preference number: 4 (lower is better)
Translates to: SRACVRSSWQAADFRDNAEPCSL*WCLIRS
Trigger: TGATCGTATCAAGCACCAGCACAGGGAGCAAGGCTC...TGCATTATCCCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACAAGCCCTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR GCA 90 bp TGGGGCAACCCCTTCCAGCCCAAGGTGCCGCACACTTTCTCCCTCTGTGTGGACTGTGTCAAGCTTTGCTaGAGGCTCTTTGTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: WGNPFQPKVPHTFSLCVDCVKLC*RLFVSE
Trigger: CTCAGAGACAAAGAGCCTGCAGCAAAGCTTGACACA...GTCCACACAGAGGGAGAAAGTGTGCGGCACCTTGGGCTGGAAGGGGTTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp TGTCCCCAGAGAGGATGGCAGCAGGTATTGGGTCCTCAGCCTTCTGGCGGGAGCGCAATGTATTTCACCTaGTCTCGGAGCTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: CPQRGWQQVLGPQPSGGSAMYFT*SRSWFP
Trigger: AGGAAACCAGCTCCGAGAGCAGGTGAAATACATTGC...GCTCCCGCCAGAAGGCTGAGGACCCAATACCTGCTGCCATCCTCTCTGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR GCA 90 bp CTCTGCTGCAGGGTGACTTCTTGCCTCTGGGGTAACATGGAGTTTACAGGTGGCATGGCCAGGCAGCTCTaGTGCAGGGTGACTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LCCRVTSCLWGNMEFTGGMARQL*CRVTSC
Trigger: GCAAGAAGTCACCCTGCAGCAGAGCTGCCTGGCCAT...GCCACCTGTAAACTCCATGTTACCCCAGAGGCAAGAAGTCACCCTGCAGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CCA 90 bp TTCCTCAAGGGCTGGCCGCATGGCCAGGCAGCTCTGCTGCAGGGTGACTTCTTGTTCAAAGTGAGCTTTTaGGTCTCGGTGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: FLKGWPHGQAALLQGDFLFKVSF*VSVNSS
Trigger: GCTGGAGTTCACCGAGACCCAAAAGCTCACTTTGAA...CAAGAAGTCACCCTGCAGCAGAGCTGCCTGGCCATGCGGCCAGCCCTTGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CCA 90 bp TCGAGGGCTTGTGTCAGGTCATCCTGGCAGGCGGCTGACTTCCGGGATAATGCACCTTGCTCCCTGTGCTaGTGCTTGATACGATCAAGC +
Preference number: 4 (lower is better)
Translates to: SRACVRSSWQAADFRDNAPCSLC*CLIRSS
Trigger: GCTTGATCGTATCAAGCACCAGCACAGGGAGCAAGG...TGCATTATCCCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACAAGCCCTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CCA 90 bp TCGAGGGCTTGTGTCAGGTCATCCTGGCAGGCGGCTGACTTCCGGGATAATGCATTCAGGGCAATGAGGTaGCTGCTGTTCATTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SRACVRSSWQAADFRDNAFRAMR*LLFIAS
Trigger: GGAGGCAATGAACAGCAGCCACCTCATTGCCCTGAA...TGCATTATCCCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACAAGCCCTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp TTCCTCAAGGGCTGGCCGCATGGCCAGGCAGCTCTGCTGCAGGGTGACTTCTTGATGAGATCATCCTGTTaGGAGACCTTTTGCCAGACT +
Preference number: 4 (lower is better)
Translates to: FLKGWPHGQAALLQGDFLMRSSC*ETFCQT
Trigger: AGTCTGGCAAAAGGTCTCTCAACAGGATGATCTCAT...CAAGAAGTCACCCTGCAGCAGAGCTGCCTGGCCATGCGGCCAGCCCTTGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR TCA 90 bp TCTGCCACTGCAGCACCTGGCAGCTCATCTCCTCTAGCTTCTTGTCAAAGGCGTGTCTCTGAGGTCACGTaGTTGAGCTTCTCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SATAAPGSSSPLASCQRRVSEVT*LSFSRA
Trigger: AGCCCTCGAGAAGCTCAATCACGTGACCTCAGAGAC...ACGCCTTTGACAAGAAGCTAGAGGAGATGAGCTGCCAGGTGCTGCAGTGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGGGAGGGGGCAGGTCTaGGATGTGAGGCACTTGGGT +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVGRGQV*DVRHLG
Trigger: ACCCAAGTGCCTCACATCTCAGACCTGCCCCCTCCC...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR TCA 90 bp AGTCGAACATGGGGACGGCAGAGGAGTGAGAATGTGCCGGGGAGGAGATCCCTCATGAGTGAGCTTCCTTaGTTACATCGCCAGTCGAAC +
Preference number: 4 (lower is better)
Translates to: SRTWGRQRSENVPGRRSLMSELP*LHRQSN
Trigger: GTTCGACTGGCGATGTAATCAAGGAAGCTCACTCAT...GAGGGATCTCCTCCCCGGCACATTCTCACTCCTCTGCCGTCCCCATGTTCGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR GCA 90 bp CCTTCACCAGGTTCTGGTACTCCTCCACATGCAGGCACTGGCTGTCTTTCTGCTCCGCCGAGTTCCCCCTaGAACATCTTCACTTGGCAT +
Preference number: 4 (lower is better)
Translates to: PSPGSGTPPHAGTGCLSAPPSSP*NIFTWH
Trigger: ATGCCAAGTGAAGATGTTGCAGGGGGAACTCGGCGG...AGCAGAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGTCGGTGAACTCCAGCTaGAGCTCCTGCAGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVSVNSS*SSCSRH
Trigger: GTGCCGGCTGCAGGAGCTGCAGCTGGAGTTCACCGA...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp AGCTCATCTCCTCTAGCTTCTTGTCAAAGGCGTGCACCTCCAGCTCACTCTCCTGTGGCCATGCACTGCTaGTTCTCCAGCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SSSPLASCQRRAPPAHSPVAMHC*FSSSFS
Trigger: GGAGAAGGAGCTGGAGAAGCAGCAGTGCATGGCCAC...AGGAGAGTGAGCTGGAGGTGCACGCCTTTGACAAGAAGCTAGAGGAGATGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp CTCTGCTGCAGGGTGACTTCTTGCCTCTGGGGTAACATGGAGTTTACAGGTGGCTCTGTGGCCATGCACTaGTGCTTCTCCAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LCCRVTSCLWGNMEFTGGSVAMH*CFSSSF
Trigger: GAAGGAGCTGGAGAAGCAGCAGTGCATGGCCACAGA...GCCACCTGTAAACTCCATGTTACCCCAGAGGCAAGAAGTCACCCTGCAGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR GCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGTTCTGGACCTCAGCCTaGAGGGCCTTGCACTCCGCC +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVFWTSA*RALHSA
Trigger: GGCGGAGTGCAAGGCCCTGCAGGCTGAGGTCCAGAA...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GAGCTAGGAGGGTATCTGTGGGTGGCTGTACAGGAAGCAAAATCGGCTTGTAGTGCCAGCCTCTCCTGCTaGTTGGCCTCTTCGAGACTG +
Preference number: 4 (lower is better)
Translates to: ELGGYLWVAVQEAKSACSASLSC*LASSRL
Trigger: CAGTCTCGAAGAGGCCAAGCAGCAGGAGAGGCTGGC...ACTACAAGCCGATTTTGCTTCCTGTACAGCCACCCACAGATACCCTCCTAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATGTGTGGACTCCGTTCTaGTCGGGCCTAGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDVWTPF*SGLGLW
Trigger: CCAAAGCCCTAGGCCCGAGCAGAACGGAGTCCACAC...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GCCTCTAGTTCCACGCGCAGATCCTTCACCAGGTTCTGGTACTCCTCCACATGCCACCCGTGGAAATGCTaGTCAGGGCTAGATGTGGAT +
Preference number: 4 (lower is better)
Translates to: ASSSTRRSFTRFWYSSTCHPWKC*SGLDVD
Trigger: ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTG...GCATGTGGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACTAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CCA 90 bp GGTCATTCTGGTGTTGCTTCTGCCACTGCAGCACCTGGCAGCTCATCTCCTCTATGCTCCTGCGCCAAATaGAGCTTCTCCCCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: GHSGVASATAAPGSSSPLCSCAK*SFSPVF
Trigger: GAACACAGGGGAGAAGCTCCATTTGGCGCAGGAGCA...TAGAGGAGATGAGCTGCCAGGTGCTGCAGTGGCAGAAGCAACACCAGAATGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CCA 90 bp GGTAGTCTGGAGATAGTGCTTCTCCTTCTGCAGAGCTTTGTCCAGCTGGGCCTGTCCACATGCAGGCACTaGCTGTCTTTCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GSLEIVLLLLQSFVQLGLSTCRH*LSFCSC
Trigger: GCAGGAGCAGAAAGACAGCCAGTGCCTGCATGTGGA...CAGGCCCAGCTGGACAAAGCTCTGCAGAAGGAGAAGCACTATCTCCAGACTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTGTGTCAGGTCATCCTaGCAGGCGGCTGACTTCCGG +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDCVRSS*QAADFR
Trigger: CCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACA...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CTCTGCTGCAGGGTGACTTCTTGCCTCTGGGGTAACATGGAGTTTACAGGTGGCCATGGAGTTTACAGGTaGCAGGAAAGGCGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LCCRVTSCLWGNMEFTGGHGVYR*QERRLW
Trigger: CCACAGCCGCCTTTCCTGCCACCTGTAAACTCCATG...GCCACCTGTAAACTCCATGTTACCCCAGAGGCAAGAAGTCACCCTGCAGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CCA 90 bp TTCCTCAAGGGCTGGCCGCATGGCCAGGCAGCTCTGCTGCAGGGTGACTTCTTGGTGACTTCTTGCCTCTaGGGTAACATGGAGTTTACA +
Preference number: 4 (lower is better)
Translates to: FLKGWPHGQAALLQGDFLVTSCL*GNMEFT
Trigger: TGTAAACTCCATGTTACCCCAGAGGCAAGAAGTCAC...CAAGAAGTCACCCTGCAGCAGAGCTGCCTGGCCATGCGGCCAGCCCTTGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537465.5
3UTR CAA 72 bp CTCTTTGGCTGCCAGCATCTTGAGGTCATTCTGGTGTaGCTTCTGCCACTGCAGCACCTGGCAGCTCATCTC +
Preference number: 4 (lower is better)
Translates to: LFGCQHLEVILV*LLPLQHLAAHL
Trigger: GAGATGAGCTGCCAGGTGCTGCAGTGGCAGAAGCAACACCAGAATGACCTCAAGATGCTGGCAGCCAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp TCGAGGGCTTGTGTCAGGTCATCCTGGCAGGCGGCTGACTTCCGGGATAATGCATCTTTCAGTTTGCAGTaGTGGTGCAGAAGAACCAGG +
Preference number: 4 (lower is better)
Translates to: SRACVRSSWQAADFRDNASFSLQ*WCRRTR
Trigger: CCTGGTTCTTCTGCACCATCACTGCAAACTGAAAGA...TGCATTATCCCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACAAGCCCTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp TGCATCATAGGCTTCTTTGGTGATGGTAGTCTGGAGATAGTGCTTCTCCTTCTGCAGGCTCCTGACCCATaGTCCCGCCGAGTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: CIIGFFGDGSLEIVLLLLQAPDP*SRRVPP
Trigger: AGGGGGAACTCGGCGGGATCATGGGTCAGGAGCCTG...CAGAAGGAGAAGCACTATCTCCAGACTACCATCACCAAAGAAGCCTATGATGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR TCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATGCTTTTGGGTCTCGGTaGACTCCAGCTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDAFGSR*TPAAAP
Trigger: AGGAGCTGCAGCTGGAGTTCACCGAGACCCAAAAGC...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TCGAGGGCTTGTGTCAGGTCATCCTGGCAGGCGGCTGACTTCCGGGATAATGCATTCAGGAGGCTGTTCTaGACCTGTGTCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SRACVRSSWQAADFRDNAFRRLF*TCVSFF
Trigger: GAAGAAACTGACACAGGTTCAGAACAGCCTCCTGAA...TGCATTATCCCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACAAGCCCTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR TCA 90 bp GACACGGCCTCTAGTTCCACGCGCAGATCCTTCACCAGGTTCTGGTACTCCTCCCTTCTAACTTGCATTTaGTGGAGCCTTGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: DTASSSTRRSFTRFWYSSLLTCI*WSLAPC
Trigger: ACAGGGAGCAAGGCTCCATCAAATGCAAGTTAGAAG...GGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACTAGAGGCCGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp TCGAGGGCTTGTGTCAGGTCATCCTGGCAGGCGGCTGACTTCCGGGATAATGCACTTCTAACTTGCATTTaGTGGAGCCTTGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SRACVRSSWQAADFRDNALLTCI*WSLAPC
Trigger: ACAGGGAGCAAGGCTCCATCAAATGCAAGTTAGAAG...TGCATTATCCCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACAAGCCCTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR TCA 90 bp ACTTTCTCCCTCTGTGTGGACTCCGTTCTGCTCGGGCCTAGGGCTTTGGTGCATCAGGCTCTTTGTCTCTaGGGTCACGTGATTGAGCTT +
Preference number: 4 (lower is better)
Translates to: TFSLCVDSVLLGPRALVHQALCL*GHVIEL
Trigger: AAGCTCAATCACGTGACCTCAGAGACAAAGAGCCTG...ATGCACCAAAGCCCTAGGCCCGAGCAGAACGGAGTCCACACAGAGGGAGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp CGGCCCAGAGCTCCCCACCATGGGTTAGGAACAGTAAGTCCTGGGGCTCTGCATCAAAGCCCTTTCATCTaGGGACTTTCATCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: RPRAPHHGLGTVSPGALHQSPFI*GLSSVH
Trigger: ATGCACAGATGAAAGTCCTCAGATGAAAGGGCTTTG...ATGCAGAGCCCCAGGACTTACTGTTCCTAACCCATGGTGGGGAGCTCTGGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR TCA 90 bp TACATCGCCAGTCGAACATGGGGACGGCAGAGGAGTGAGAATGTGCCGGGGAGGGCATATCGGAATGAGTaGGCTTCCTTGATTACATCG +
Preference number: 4 (lower is better)
Translates to: YIASRTWGRQRSENVPGRAYRNE*ASLITS
Trigger: CGATGTAATCAAGGAAGCTCACTCATTCCGATATGC...CCTCCCCGGCACATTCTCACTCCTCTGCCGTCCCCATGTTCGACTGGCGATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR GCA 90 bp AAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTATGCCGGCCAAGGCGAGTTaGTCCTGCGCCAAATGGAGC +
Preference number: 4 (lower is better)
Translates to: KKHPWKCCSGLDVDSSSMPAKAS*SCAKWS
Trigger: GCTCCATTTGGCGCAGGAGCAACTCGCCTTGGCCGG...CATACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CCTTCACCAGGTTCTGGTACTCCTCCACATGCAGGCACTGGCTGTCTTTCTGCTTGGTACTCCTCCACATaGAGGCACTGGCTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: PSPGSGTPPHAGTGCLSAWYSST*RHWLSF
Trigger: GAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCA...AGCAGAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAATCCAGCTGCAGCTCCTaGAGCCGGCACTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKSSCSS*SRHCRM
Trigger: CATCCTGCAGTGCCGGCTGCAGGAGCTGCAGCTGGA...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TGTGTTGGGGCTGCTGGCTCTGGTTGGTTCCCTGTCCTTTTCGCCACTCAGCTTTGCTCCCTGTGCTGGTaGTTGATACGATCAAGCATG +
Preference number: 4 (lower is better)
Translates to: CVGAAGSGWFPVLFATQLCSLCW*LIRSSM
Trigger: CATGCTTGATCGTATCAAGCACCAGCACAGGGAGCA...AAGCTGAGTGGCGAAAAGGACAGGGAACCAACCAGAGCCAGCAGCCCCAACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp CTTCTGGCGGGAGCCCTGAGGCTGCGGACAAAGCCCTTTCATCTGAGGACTTTCGACCTTCTGCTGTTTTaGCCATTGCTCCAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: LLAGALRLRTKPFHLRTFDLLLF*PLLQVG
Trigger: ACCAACTTGGAGCAATGGGCAAAACAGCAGAAGGTC...GAAAGTCCTCAGATGAAAGGGCTTTGTCCGCAGCCTCAGGGCTCCCGCCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR GCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGTGTGGACTCCGTTCTaGTCGGGCCTAGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVVWTPF*SGLGLW
Trigger: CCAAAGCCCTAGGCCCGAGCAGAACGGAGTCCACAC...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GCCTCTAGTTCCACGCGCAGATCCTTCACCAGGTTCTGGTACTCCTCCACATGCAAACACCCGTGGAAATaGTGCTCAGGGCTAGATGTG +
Preference number: 4 (lower is better)
Translates to: ASSSTRRSFTRFWYSSTCKHPWK*CSGLDV
Trigger: CACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTT...GCATGTGGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACTAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CCA 90 bp TCGAGGGCTTGTGTCAGGTCATCCTGGCAGGCGGCTGACTTCCGGGATAATGCATTCAAAGTGAGCTTTTaGGTCTCGGTGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: SRACVRSSWQAADFRDNAFKVSF*VSVNSS
Trigger: GCTGGAGTTCACCGAGACCCAAAAGCTCACTTTGAA...TGCATTATCCCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACAAGCCCTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATCTGTTCTTCAGCTTCTaGACCTCAGCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDLFFSF*TSACRA
Trigger: GGCCCTGCAGGCTGAGGTCCAGAAGCTGAAGAACAG...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GGAAGACTTGATGCCAAAGCCCAAATAGCTTGGGGCTCCACCAGATATGAGATGTGTGTCAGGTCATCCTaGCAGGCGGCTGACTTCCGG +
Preference number: 4 (lower is better)
Translates to: GRLDAKAQIAWGSTRYEMCVRSS*QAADFR
Trigger: CCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACA...CATCTCATATCTGGTGGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CCA 90 bp GAAGATCTACACTCCAGGCCGGAAAGAGCAAGGGGAGCCCATGACCCCTCGCCGTTCCTAGTTTCTCATTaGCGACCTTCTGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: EDLHSRPERARGAHDPSPFLVSH*RPSAVL
Trigger: CAAAACAGCAGAAGGTCGCCAATGAGAAACTAGGAA...CGGCGAGGGGTCATGGGCTCCCCTTGCTCTTTCCGGCCTGGAGTGTAGATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR CCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATAAGGACGGGTTGTGTTaGGGCTGCTGGCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDKDGLC*GCWLWL
Trigger: CAACCAGAGCCAGCAGCCCCAACACAACCCGTCCTT...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355636.10
ENST00000379073.9
CDS-3UTR CCA 90 bp GCCTCCTCCCTTTACAGATGTGAAAACAACGATCTTTGGTCCAAAGTCGCTAAGCCCAGGCTGGGTAGGTaGCTGGGGTGCTCTTACGGG +
Preference number: 4 (lower is better)
Translates to: ASSLYRCENNDLWSKVAKPRLGR*LGCSYG
Trigger: CCCGTAAGAGCACCCCAGCCACCTACCCAGCCTGGG...CTTAGCGACTTTGGACCAAAGATCGTTGTTTTCACATCTGTAAAGGGAGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
3UTR CAA 72 bp CACTCCGCCTCCTTGGACTTGTCCTGCTTAGCCTCCTaGACTGTCATTTCAAGTTCTGTGGCCATGCACTGC +
Preference number: 4 (lower is better)
Translates to: HSASLDLSCLAS*TVISSSVAMHC
Trigger: GCAGTGCATGGCCACAGAACTTGAAATGACAGTCAAGGAGGCTAAGCAGGACAAGTCCAAGGAGGCGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CAA 72 bp TCTCTCTGTAGTTCCTGGATGGTGTCTGCCTTCTGCTaGTCCAGGAGGAGACCCTTCTGCAGTTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SLCSSWMVSAFC*SRRRPFCSFLW
Trigger: CCAGAGGAAACTGCAGAAGGGTCTCCTCCTGGACAAGCAGAAGGCAGACACCATCCAGGAACTACAGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAGGCTCCTGACCCATaGTCCCGCCGAGTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQQAPDP*SRRVPP
Trigger: AGGGGGAACTCGGCGGGATCATGGGTCAGGAGCCTG...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGCTTTTGGGTCTCGGTaGACTCCAGCTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVAFGSR*TPAAAP
Trigger: AGGAGCTGCAGCTGGAGTTCACCGAGACCCAAAAGC...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TGTGCTCATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGCACTGGGCTGCTTGCTaGGCAGCCAGCCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CAHAHVFISEFGPGDGSMHWAAC*AASLSC
Trigger: GCAGGAGAGGCTGGCTGCTCAGCAAGCAGCCCAGTG...CATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATGAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237353.15
CDS-3UTR TCA 90 bp CTAAAATGTAACATTGGAAGACTTGATGCCAAAGCCCAAATAGCTTGGGGCTCCCACTGGGCTGCTTGCTaGGCAGCCAGCCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LKCNIGRLDAKAQIAWGSHWAAC*AASLSC
Trigger: GCAGGAGAGGCTGGCTGCTCAGCAAGCAGCCCAGTG...GGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCCAATGTTACATTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR TCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAATGGATTCTAGCAGTATaGGGAACCCGGGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQEWILAV*GTRAVG
Trigger: CCCCACTGCCCGGGTTCCTCATACTGCTAGAATCCA...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
CDS-3UTR GCA 90 bp CTCTGCTGCAGGGTGACTTCTTGCCTCTGGGGTAACATGGAGTTTACAGGTGGCGCTTGCTGTTCAGGCTaGTCACTTCTCTGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LCCRVTSCLWGNMEFTGGACCSG*SLLCLS
Trigger: AGAGAGACAGAGAAGTGAGCAGCCTGAACAGCAAGC...GCCACCTGTAAACTCCATGTTACCCCAGAGGCAAGAAGTCACCCTGCAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR GCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGCCATGCACTGCTaGTTCTCCAGCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQEVAMHC*FSSSFS
Trigger: GGAGAAGGAGCTGGAGAAGCAGCAGTGCATGGCCAC...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp AGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTAGAGCTTCTGTGGCCATGCACTaGTGCTTCTCCAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RNISLAQQPGANGEGSRASVAMH*CFSSSF
Trigger: GAAGGAGCTGGAGAAGCAGCAGTGCATGGCCACAGA...AGCTCTACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR GCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGTTCTGGACCTCAGCCTaGAGGGCCTTGCACTCCGCC +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWFWTSA*RALHSA
Trigger: GGCGGAGTGCAAGGCCCTGCAGGCTGAGGTCCAGAA...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTTTCTGGACCTCAGCCTaGAGGGCCTTGCACTCCGCC +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTFWTSA*RALHSA
Trigger: GGCGGAGTGCAAGGCCCTGCAGGCTGAGGTCCAGAA...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATCTCCAGGTGACAGCCTaGCAGTGCAGCCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDLQVTA*QCSLFF
Trigger: AAAGAAGAGGCTGCACTGGCAGGCTGTCACCTGGAG...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATAGGAGGAGACCCTTCTaGAGTTTCCTCTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDRRRPF*SFLWVS
Trigger: GGACACCCAGAGGAAACTGCAGAAGGGTCTCCTCCT...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp AGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTAGAGCTAGGAGGAGACCCTTCTaGAGTTTCCTCTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: RNISLAQQPGANGEGSRARRRPF*SFLWVS
Trigger: GGACACCCAGAGGAAACTGCAGAAGGGTCTCCTCCT...AGCTCTACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR GCA 90 bp AGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTAGAGCTATGGTGTCTGCCTTCTaGTTGTCCAGGAGGAGACCC +
Preference number: 4 (lower is better)
Translates to: RNISLAQQPGANGEGSRAMVSAF*LSRRRP
Trigger: GGGTCTCCTCCTGGACAAGCAGAAGGCAGACACCAT...AGCTCTACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR GCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATATGGTGTCTGCCTTCTaGTTGTCCAGGAGGAGACCC +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDMVSAF*LSRRRP
Trigger: GGGTCTCCTCCTGGACAAGCAGAAGGCAGACACCAT...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GAGCTAGGAGGGTATCTGTGGGTGGCTGTACAGGAAGCAAAATCGGCTTGTAGTTTGTCCAGCTGGGCCTaGAGGCTCATTAAGGACTCC +
Preference number: 4 (lower is better)
Translates to: ELGGYLWVAVQEAKSACSLSSWA*RLIKDS
Trigger: GGAGTCCTTAATGAGCCTGCAGGCCCAGCTGGACAA...ACTACAAGCCGATTTTGCTTCCTGTACAGCCACCCACAGATACCCTCCTAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp GGTCATTCTGGTGTTGCTTCTGCCACTGCAGCACCTGGCAGCTCATCTCCTCTATCATTGGCGACCTTCTaGTGTTTTGCCCATTGCTCC +
Preference number: 4 (lower is better)
Translates to: GHSGVASATAAPGSSSPLSLATF*CFAHCS
Trigger: GGAGCAATGGGCAAAACAGCAGAAGGTCGCCAATGA...TAGAGGAGATGAGCTGCCAGGTGCTGCAGTGGCAGAAGCAACACCAGAATGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAACCTTCCAGCCCAAGGTaGCGCACACTTTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQEPSSPR*RTLSPS
Trigger: AGAGGGAGAAAGTGTGCGGCACCTTGGGCTGGAAGG...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGCCTTCCAGCCCAAGGTaGCGCACACTTTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQPSSPR*RTLSPS
Trigger: AGAGGGAGAAAGTGTGCGGCACCTTGGGCTGGAAGG...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCCACATGCAGGCACTaGCTGTCTTTCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDSTCRH*LSFCSC
Trigger: GCAGGAGCAGAAAGACAGCCAGTGCCTGCATGTGGA...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TCGAGGGCTTGTGTCAGGTCATCCTGGCAGGCGGCTGACTTCCGGGATAATGCATCATTTCAAGTTCTGTaGCCATGCACTGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SRACVRSSWQAADFRDNASFQVL*PCTAAS
Trigger: AGAAGCAGCAGTGCATGGCCACAGAACTTGAAATGA...TGCATTATCCCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACAAGCCCTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CCA 90 bp AGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTAGAGCTGCCTCTCCTGCTGCTTaGCCTCTTCGAGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: RNISLAQQPGANGEGSRAASPAA*PLRDCS
Trigger: AGAACAGTCTCGAAGAGGCCAAGCAGCAGGAGAGGC...AGCTCTACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CCA 90 bp TTCCTGCCGCAAAGCTTCAAGTTCTCCCTCCATCAGCTTCTCATGCTCTTTGCTTGCCACTGCAGCACCTaGCAGCTCATCTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: FLPQSFKFSLHQLLMLFACHCST*QLISSS
Trigger: GCTAGAGGAGATGAGCTGCCAGGTGCTGCAGTGGCA...AGCAAAGAGCATGAGAAGCTGATGGAGGGAGAACTTGAAGCTTTGCGGCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGTGCCACTGCAGCACCTaGCAGCTCATCTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQCHCST*QLISSS
Trigger: GCTAGAGGAGATGAGCTGCCAGGTGCTGCAGTGGCA...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTGCGGCCATCTCCTCCTaGAACTCCCTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTAAISS*NSLSCS
Trigger: GGAGCAGCTCAGGGAGTTCCAGGAGGAGATGGCCGC...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAACTTTCTCCCTCTGTGTaGACTCCGTTCTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQELSPSV*TPFCSG
Trigger: GCCCGAGCAGAACGGAGTCCACACAGAGGGAGAAAG...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGCTTTCTCCCTCTGTGTaGACTCCGTTCTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQLSPSV*TPFCSG
Trigger: GCCCGAGCAGAACGGAGTCCACACAGAGGGAGAAAG...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGCTGCTGGCTCTGGTTaGTTCCCTGTCCTTTTCGCC +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVAAGSG*FPVLFA
Trigger: GGCGAAAAGGACAGGGAACCAACCAGAGCCAGCAGC...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355636.10
ENST00000379073.9
CDS-3UTR CCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTGGGGCTGCTGGCTCTaGTTGGTTCCCTGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDWGCWL*LVPCPF
Trigger: AAAAGGACAGGGAACCAACCAGAGCCAGCAGCCCCA...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355636.10
ENST00000379073.9
CDS-3UTR CCA 90 bp CTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTAAGGACGGGTTGTGTTaGGGCTGCTGGCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: LKKHPWKCCSGLDVDSSSKDGLC*GCWLWL
Trigger: CAACCAGAGCCAGCAGCCCCAACACAACCCGTCCTT...ACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CAA 72 bp GCTCTGGTTGGTTCCCTGTCCTTTTCGCCACTCAGCTaGGCAATGTATTTCACCTGCTCTCGGAGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: ALVGSLSFSPLS*AMYFTCSRSWF
Trigger: AAACCAGCTCCGAGAGCAGGTGAAATACATTGCCAAGCTGAGTGGCGAAAAGGACAGGGAACCAACCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp GAAATGAGAGTTTTGATTCGAGGAGAAATTAACGAGGTGATTCCTCAAGGGCTGCAGGCTCCTGACCCATaGTCCCGCCGAGTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: EMRVLIRGEINEVIPQGLQAPDP*SRRVPP
Trigger: AGGGGGAACTCGGCGGGATCATGGGTCAGGAGCCTG...CAGCCCTTGAGGAATCACCTCGTTAATTTCTCCTCGAATCAAAACTCTCATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR TCA 90 bp GGTAGTCTGGAGATAGTGCTTCTCCTTCTGCAGAGCTTTGTCCAGCTGGGCCTGATCCGTACCTTTGAATaGTCACCCTTGTTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GSLEIVLLLLQSFVQLGLIRTFE*SPLFSG
Trigger: GCCTGAGAACAAGGGTGATCATTCAAAGGTACGGAT...CAGGCCCAGCTGGACAAAGCTCTGCAGAAGGAGAAGCACTATCTCCAGACTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR TCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATGGCACTGCAGGATGGTaGTGTCCTTATCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDGTAGW*CPYPSS
Trigger: AGAGGAAGGATAAGGACATCACCATCCTGCAGTGCC...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCACACTGGGCTGCTTGCTaGGCAGCCAGCCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPHWAAC*AASLSC
Trigger: GCAGGAGAGGCTGGCTGCTCAGCAAGCAGCCCAGTG...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
CDS-3UTR TCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATGTGAGGTCCATTCTTTaGCCCATATCCTGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDVRSIL*PISWGN
Trigger: GTTGCCCCAGGATATGGGTCAAAGAATGGACCTCAC...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp AGCTCATCTCCTCTAGCTTCTTGTCAAAGGCGTGCACCTCCAGCTCACTCTCCTTACTCCTGTAAGAGCTaGTCCAGGTCAAGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SSSPLASCQRRAPPAHSPYSCKS*SRSRER
Trigger: CCTCTCTCTTGACCTGGATCAGCTCTTACAGGAGTA...AGGAGAGTGAGCTGGAGGTGCACGCCTTTGACAAGAAGCTAGAGGAGATGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp GCCTCTAGTTCCACGCGCAGATCCTTCACCAGGTTCTGGTACTCCTCCACATGCATATTTTCAGGGCAATaGGGTGGCTGCTGTTCATTG +
Preference number: 4 (lower is better)
Translates to: ASSSTRRSFTRFWYSSTCIFSGQ*GGCCSL
Trigger: CAATGAACAGCAGCCACCTCATTGCCCTGAAAATAT...GCATGTGGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACTAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTCACTGGGCTGCTTGCTaGGCTGCAGGGGCCTCACCA +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSHWAAC*AAGASP
Trigger: TGGTGAGGCCCCTGCAGCTCAGCAAGCAGCCCAGTG...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR TCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGGCAGGTCTGAGATGTaGGGCACTTGGGTATGCTTC +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVGRSEM*GTWVCF
Trigger: GAAGCATACCCAAGTGCCTCACATCTCAGACCTGCC...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR GCA 90 bp CCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCGCTAATGCCTGTGCTTaGTTCTTGTCGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLKKHPWKCCSGLDVDSSANACA*FLSWLL
Trigger: CAGCAGCCACGACAAGAAGCAAGCACAGGCATTAGC...GCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR GCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGAAGGCGAGTTGCTCCTaGGCCAAATGGAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVKASCS*AKWSFS
Trigger: GGAGAAGCTCCATTTGGCGCAGGAGCAACTCGCCTT...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGAAGGCGAGTTGCTCCTaGGCCAAATGGAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQKASCS*AKWSFS
Trigger: GGAGAAGCTCCATTTGGCGCAGGAGCAACTCGCCTT...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACCGGCCAAGGCGAGTTaGTCCTGCGCCAAATGGAGC +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQPAKAS*SCAKWS
Trigger: GCTCCATTTGGCGCAGGAGCAACTCGCCTTGGCCGG...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp AGCTCATCTCCTCTAGCTTCTTGTCAAAGGCGTGCACCTCCAGCTCACTCTCCTCACTGGCTGTCTTTCTaGTCCTGCAAGTGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SSSPLASCQRRAPPAHSPHWLSF*SCKCFS
Trigger: ACTGAAGCACTTGCAGGAGCAGAAAGACAGCCAGTG...AGGAGAGTGAGCTGGAGGTGCACGCCTTTGACAAGAAGCTAGAGGAGATGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp TATGGAAGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTTCCTGCAGCCGGCACTaGAGGATGGTGATGTCCTTA +
Preference number: 4 (lower is better)
Translates to: YGRNISLAQQPGANGEGSSCSRH*RMVMSL
Trigger: TAAGGACATCACCATCCTGCAGTGCCGGCTGCAGGA...ACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCTTCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR GCA 90 bp TGCATCATAGGCTTCTTTGGTGATGGTAGTCTGGAGATAGTGCTTCTCCTTCTGGCCAGCCTCTCCTGCTaGTTGGCCTCTTCGAGACTG +
Preference number: 4 (lower is better)
Translates to: CIIGFFGDGSLEIVLLLLASLSC*LASSRL
Trigger: CAGTCTCGAAGAGGCCAAGCAGCAGGAGAGGCTGGC...CAGAAGGAGAAGCACTATCTCCAGACTACCATCACCAAAGAAGCCTATGATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR GCA 90 bp AGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTAGAGCTCATTTGATGGAGCCTTaGTCCCTGTGCTGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: RNISLAQQPGANGEGSRAHLMEP*SLCWCL
Trigger: CAAGCACCAGCACAGGGAGCAAGGCTCCATCAAATG...AGCTCTACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR GCA 90 bp TCGAGGGCTTGTGTCAGGTCATCCTGGCAGGCGGCTGACTTCCGGGATAATGCAAAGTCTTGGATGACTTaGTGGCTGGTGTTGTATTTG +
Preference number: 4 (lower is better)
Translates to: SRACVRSSWQAADFRDNAKSWMT*WLVLYL
Trigger: CAAATACAACACCAGCCAGCAAGTCATCCAAGACTT...TGCATTATCCCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACAAGCCCTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR GCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGTTCTGGTGTTGCTTCTaGCACTGCAGCACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVFWCCF*HCSTWQ
Trigger: CTGCCAGGTGCTGCAGTGGCAGAAGCAACACCAGAA...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GAGCTAGGAGGGTATCTGTGGGTGGCTGTACAGGAAGCAAAATCGGCTTGTAGTAGGTCATTCTGGTGTTaGTTCTGCCACTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: ELGGYLWVAVQEAKSACSRSFWC*FCHCST
Trigger: GGTGCTGCAGTGGCAGAAGCAACACCAGAATGACCT...ACTACAAGCCGATTTTGCTTCCTGTACAGCCACCCACAGATACCCTCCTAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp CCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGGTCATTCTGGTGTTaGTTCTGCCACTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: PLKKHPWKCCSGLDVDSSRSFWC*FCHCST
Trigger: GGTGCTGCAGTGGCAGAAGCAACACCAGAATGACCT...GCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TTCCTGCCGCAAAGCTTCAAGTTCTCCCTCCATCAGCTTCTCATGCTCTTTGCTGGCCTAGGGCTTTGGTaGATAGCCTTGTGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: FLPQSFKFSLHQLLMLFAGLGLW*IALCSR
Trigger: CCGAGAACACAAGGCTATGCACCAAAGCCCTAGGCC...AGCAAAGAGCATGAGAAGCTGATGGAGGGAGAACTTGAAGCTTTGCGGCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAACCTTCCAGCCCAAGGTaGCGCACACTTTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKPSSPR*RTLSPS
Trigger: AGAGGGAGAAAGTGTGCGGCACCTTGGGCTGGAAGG...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp AAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTATGCCTTCCAGCCCAAGGTaGCGCACACTTTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: KKHPWKCCSGLDVDSSSMPSSPR*RTLSPS
Trigger: AGAGGGAGAAAGTGTGCGGCACCTTGGGCTGGAAGG...CATACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTGGGTTGTGTTGGGGCTaGTGGCTCTGGTTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTGLCWG*WLWLVP
Trigger: GGGAACCAACCAGAGCCAGCAGCCCCAACACAACCC...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355636.10
ENST00000379073.9
CDS-3UTR CCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATGCTTGCTTCTTGTCGTaGCTGCTGTTCATTGCCTCC +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDACFLS*LLFIAS
Trigger: GGAGGCAATGAACAGCAGCCACGACAAGAAGCAAGC...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR CCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGTGCTCCTGCGCCAAATaGAGCTTCTCCCCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVCSCAK*SFSPVF
Trigger: GAACACAGGGGAGAAGCTCCATTTGGCGCAGGAGCA...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAATCCACATGCAGGCACTaGCTGTCTTTCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQESTCRH*LSFCSC
Trigger: GCAGGAGCAGAAAGACAGCCAGTGCCTGCATGTGGA...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATCCTTGCTCCCTGTGCTaGTGCTTGATACGATCAAGC +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDPCSLC*CLIRSS
Trigger: GCTTGATCGTATCAAGCACCAGCACAGGGAGCAAGG...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGTCCAGCTCACTCTCCTaGTGGAAGCCCCGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQSSSLS*WKPRSF
Trigger: AAAACTGCGGGGCTTCCACCAGGAGAGTGAGCTGGA...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GCCTCTAGTTCCACGCGCAGATCCTTCACCAGGTTCTGGTACTCCTCCACATGCTCTTGCAAAATAGGCTaGGACCGTGATATACTCCTG +
Preference number: 4 (lower is better)
Translates to: ASSSTRRSFTRFWYSSTCSCKIG*DRDILL
Trigger: CAGGAGTATATCACGGTCCCAGCCTATTTTGCAAGA...GCATGTGGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACTAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp GGTAGTCTGGAGATAGTGCTTCTCCTTCTGCAGAGCTTTGTCCAGCTGGGCCTGCATCGTGCAGATTCTTaGTGTCAAGTTGCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: GSLEIVLLLLQSFVQLGLHRADS*CQVAGL
Trigger: TAAGCCTGCAACTTGACATCAAGAATCTGCACGATG...CAGGCCCAGCTGGACAAAGCTCTGCAGAAGGAGAAGCACTATCTCCAGACTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp AGCTCATCTCCTCTAGCTTCTTGTCAAAGGCGTGCACCTCCAGCTCACTCTCCTTGGAGTTGTCTCAGATaGCACTGTTTACTGGACCCA +
Preference number: 4 (lower is better)
Translates to: SSSPLASCQRRAPPAHSPWSCLR*HCLLDP
Trigger: TGGGTCCAGTAAACAGTGTCATCTGAGACAACTCCA...AGGAGAGTGAGCTGGAGGTGCACGCCTTTGACAAGAAGCTAGAGGAGATGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp CCTTCACCAGGTTCTGGTACTCCTCCACATGCAGGCACTGGCTGTCTTTCTGCTATGAGATCATCCTGTTaGGAGACCTTTTGCCAGACT +
Preference number: 4 (lower is better)
Translates to: PSPGSGTPPHAGTGCLSAMRSSC*ETFCQT
Trigger: AGTCTGGCAAAAGGTCTCTCAACAGGATGATCTCAT...AGCAGAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGGCTTTTGGGTCTCGGTaGACTCCAGCTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWAFGSR*TPAAAP
Trigger: AGGAGCTGCAGCTGGAGTTCACCGAGACCCAAAAGC...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATCCCTGTGCTGGTGCTTaGTACGATCAAGCATGTCAT +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDPCAGA*YDQACH
Trigger: ATGACATGCTTGATCGTATCAAGCACCAGCACAGGG...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp CCTTCACCAGGTTCTGGTACTCCTCCACATGCAGGCACTGGCTGTCTTTCTGCTAGCTTTGTGGCCTCCTaGAGATCTTCTTCTAACTTG +
Preference number: 4 (lower is better)
Translates to: PSPGSGTPPHAGTGCLSASFVAS*RSSSNL
Trigger: CAAGTTAGAAGAAGATCTTCAGGAGGCCACAAAGCT...AGCAGAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp AAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTATGGTCTCTGAGGTCACGTaGTTGAGCTTCTCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: KKHPWKCCSGLDVDSSSMVSEVT*LSFSRA
Trigger: AGCCCTCGAGAAGCTCAATCACGTGACCTCAGAGAC...CATACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTTGGATTCTAGCAGTATaGGGAACCCGGGCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTWILAV*GTRAVG
Trigger: CCCCACTGCCCGGGTTCCTCATACTGCTAGAATCCA...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
CDS-3UTR GCA 90 bp CCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCTCATTGCCTCCTCCATaGAGAGCTGATTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PLKKHPWKCCSGLDVDSSSLPPP*RADCPA
Trigger: TGCAGGACAATCAGCTCTGCATGGAGGAGGCAATGA...GCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp AAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTATGGTGGCTGCTGTTCATTaGCTCCTCCATGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: KKHPWKCCSGLDVDSSSMVAAVH*LLHAEL
Trigger: CAGCTCTGCATGGAGGAGGCAATGAACAGCAGCCAC...CATACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTCCGGCCAAGGCGAGTTaGTCCTGCGCCAAATGGAGC +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSPAKAS*SCAKWS
Trigger: GCTCCATTTGGCGCAGGAGCAACTCGCCTTGGCCGG...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCACCGGCCAAGGCGAGTTaGTCCTGCGCCAAATGGAGC +
Preference number: 4 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPPAKAS*SCAKWS
Trigger: GCTCCATTTGGCGCAGGAGCAACTCGCCTTGGCCGG...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATCACTGGCTGTCTTTCTaGTCCTGCAAGTGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDHWLSF*SCKCFS
Trigger: ACTGAAGCACTTGCAGGAGCAGAAAGACAGCCAGTG...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGTGGTACTCCTCCACATaGAGGCACTGGCTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVWYSST*RHWLSF
Trigger: GAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCA...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAATGGTACTCCTCCACATaGAGGCACTGGCTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQEWYSST*RHWLSF
Trigger: GAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCA...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAATCCTGCAGCCGGCACTaGAGGATGGTGATGTCCTTA +
Preference number: 4 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKSCSRH*RMVMSL
Trigger: TAAGGACATCACCATCCTGCAGTGCCGGCTGCAGGA...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCCAGCTGCAGCTCCTaGAGCCGGCACTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVSSCSS*SRHCRM
Trigger: CATCCTGCAGTGCCGGCTGCAGGAGCTGCAGCTGGA...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTTCGGTGAACTCCAGCTaGAGCTCCTGCAGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSSVNSS*SSCSRH
Trigger: GTGCCGGCTGCAGGAGCTGCAGCTGGAGTTCACCGA...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATCGGTGAACTCCAGCTaGAGCTCCTGCAGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPSVNSS*SSCSRH
Trigger: GTGCCGGCTGCAGGAGCTGCAGCTGGAGTTCACCGA...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGGTGGCCATGCACTGCTaGTTCTCCAGCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWVAMHC*FSSSFS
Trigger: GGAGAAGGAGCTGGAGAAGCAGCAGTGCATGGCCAC...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAATCTGTGGCCATGCACTaGTGCTTCTCCAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKSVAMH*CFSSSF
Trigger: GAAGGAGCTGGAGAAGCAGCAGTGCATGGCCACAGA...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAACAAGTTCTGTGGCCATaGACTGCTGCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQEQVLWP*TAASPA
Trigger: AGCTGGAGAAGCAGCAGTGCATGGCCACAGAACTTG...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGTCTGAGATGTGAGGCACTTGGGTATGCTTCAGATGTTCTTAGATCAGAAGGGGTGACAGCCTGCCAGTaGAGCCTCTTCTTTGCACTG +
Preference number: 4 (lower is better)
Translates to: GLRCEALGYASDVLRSEGVTACQ*SLFFAL
Trigger: CAGTGCAAAGAAGAGGCTGCACTGGCAGGCTGTCAC...CCCTTCTGATCTAAGAACATCTGAAGCATACCCAAGTGCCTCACATCTCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR GCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTGCTCCCTGTGCTGGTaGTTGATACGATCAAGCATG +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDCSLCW*LIRSSM
Trigger: CATGCTTGATCGTATCAAGCACCAGCACAGGGAGCA...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAGCCTTGCTCCCTGTaGTGGTGCTTGATACGATCA +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQEPCSL*WCLIRS
Trigger: TGATCGTATCAAGCACCAGCACAGGGAGCAAGGCTC...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGCATTTGATGGAGCCTTaGTCCCTGTGCTGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVHLMEP*SLCWCL
Trigger: CAAGCACCAGCACAGGGAGCAAGGCTCCATCAAATG...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGCATTTGATGGAGCCTTaGTCCCTGTGCTGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQHLMEP*SLCWCL
Trigger: CAAGCACCAGCACAGGGAGCAAGGCTCCATCAAATG...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TATGGAAGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTTCCTTCACCAGGTTCTaGTACTCCTCCACATGCAGG +
Preference number: 4 (lower is better)
Translates to: YGRNISLAQQPGANGEGSSFTRF*YSSTCR
Trigger: CCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGGA...ACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCTTCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CCA 90 bp GCCTCTAGTTCCACGCGCAGATCCTTCACCAGGTTCTGGTACTCCTCCACATGCTCTTGGATGACTTGCTaGCTGGTGTTGTATTTGTTG +
Preference number: 4 (lower is better)
Translates to: ASSSTRRSFTRFWYSSTCSWMTC*LVLYLL
Trigger: CAACAAATACAACACCAGCCAGCAAGTCATCCAAGA...GCATGTGGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACTAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGAGAGCTTTGTCCAGCTaGGCCTGCAGGCTCATTAAG +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVRALSS*ACRLIK
Trigger: CTTAATGAGCCTGCAGGCCCAGCTGGACAAAGCTCT...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAAGAGCTTTGTCCAGCTaGGCCTGCAGGCTCATTAAG +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQERALSS*ACRLIK
Trigger: CTTAATGAGCCTGCAGGCCCAGCTGGACAAAGCTCT...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GGAAGACTTGATGCCAAAGCCCAAATAGCTTGGGGCTCCACCAGATATGAGATGAGAGCTTTGTCCAGCTaGGCCTGCAGGCTCATTAAG +
Preference number: 4 (lower is better)
Translates to: GRLDAKAQIAWGSTRYEMRALSS*ACRLIK
Trigger: CTTAATGAGCCTGCAGGCCCAGCTGGACAAAGCTCT...CATCTCATATCTGGTGGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAAGCTCACTCTCCTGGTaGAAGCCCCGCAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQESSLSW*KPRSFL
Trigger: AAGAAAACTGCGGGGCTTCCACCAGGAGAGTGAGCT...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GGAAGACTTGATGCCAAAGCCCAAATAGCTTGGGGCTCCACCAGATATGAGATGAGCTCACTCTCCTGGTaGAAGCCCCGCAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GRLDAKAQIAWGSTRYEMSSLSW*KPRSFL
Trigger: AAGAAAACTGCGGGGCTTCCACCAGGAGAGTGAGCT...CATCTCATATCTGGTGGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CCA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCAGCGGCCATCTCCTCCTaGAACTCCCTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPAAISS*NSLSCS
Trigger: GGAGCAGCTCAGGGAGTTCCAGGAGGAGATGGCCGC...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTGCCTACAGGTGTCTTTaGGCACAGACCACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTAYRCL*AQTTGA
Trigger: TGCCCCAGTGGTCTGTGCCCAAAGACACCTGTAGGC...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GCCTCCTCCCTTTACAGATGTGAAAACAACGATCTTTGGTCCAAAGTCGCTAAGGCCTACAGGTGTCTTTaGGCACAGACCACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: ASSLYRCENNDLWSKVAKAYRCL*AQTTGA
Trigger: TGCCCCAGTGGTCTGTGCCCAAAGACACCTGTAGGC...CTTAGCGACTTTGGACCAAAGATCGTTGTTTTCACATCTGTAAAGGGAGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CCA 90 bp GGTCATTCTGGTGTTGCTTCTGCCACTGCAGCACCTGGCAGCTCATCTCCTCTATTTCGCCACTCAGCTTaGCAATGTATTTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: GHSGVASATAAPGSSSPLFRHSA*QCISPA
Trigger: AGCAGGTGAAATACATTGCCAAGCTGAGTGGCGAAA...TAGAGGAGATGAGCTGCCAGGTGCTGCAGTGGCAGAAGCAACACCAGAATGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCTTTCTCCCTCTGTGTaGACTCCGTTCTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTLSPSV*TPFCSG
Trigger: GCCCGAGCAGAACGGAGTCCACACAGAGGGAGAAAG...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCCTGAAGAAACACCCGTaGAAATGCTGCTCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: PLKKHPWKCCSGLDVDSSLKKHP*KCCSGL
Trigger: TAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAG...GCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGCCTCTGGGGTAACATaGAGTTTACAGGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVASGVT*SLQVAG
Trigger: TCCTGCCACCTGTAAACTCCATGTTACCCCAGAGGC...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR TCA 90 bp ACTTTCTCCCTCTGTGTGGACTCCGTTCTGCTCGGGCCTAGGGCTTTGGTGCATGCTTCAGTATCTTTTTaGTGTCTTCACACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: TFSLCVDSVLLGPRALVHASVSF*CLHTLL
Trigger: CAGAAGAGTGTGAAGACATCAAAAAGATACTGAAGC...ATGCACCAAAGCCCTAGGCCCGAGCAGAACGGAGTCCACACAGAGGGAGAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp AAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTATGGGCACTGCAGGATGGTaGTGTCCTTATCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KKHPWKCCSGLDVDSSSMGTAGW*CPYPSS
Trigger: AGAGGAAGGATAAGGACATCACCATCCTGCAGTGCC...CATACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GGTGCTCTTACGGGGTTTCCAGACGTAGAAGGAAGATGCCTCTTCTACCTGTTCTTCAGGAGGCTGTTCTaGACCTGTGTCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: GALTGFPDVEGRCLFYLFFRRLF*TCVSFF
Trigger: GAAGAAACTGACACAGGTTCAGAACAGCCTCCTGAA...GAACAGGTAGAAGAGGCATCTTCCTTCTACGTCTGGAAACCCCGTAAGAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR TCA 90 bp GGTAGTCTGGAGATAGTGCTTCTCCTTCTGCAGAGCTTTGTCCAGCTGGGCCTGCCTCTTTTCCTTGTCTaGATTTTCAAGCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GSLEIVLLLLQSFVQLGLPLFLV*IFKLPQ
Trigger: CTGAGGAAGCTTGAAAATTCAGACAAGGAAAAGAGG...CAGGCCCAGCTGGACAAAGCTCTGCAGAAGGAGAAGCACTATCTCCAGACTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR TCA 90 bp CTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTCCCTGTGCTGGTGCTTaGTACGATCAAGCATGTCAT +
Preference number: 4 (lower is better)
Translates to: LKKHPWKCCSGLDVDSSSPCAGA*YDQACH
Trigger: ATGACATGCTTGATCGTATCAAGCACCAGCACAGGG...ACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GGAAGACTTGATGCCAAAGCCCAAATAGCTTGGGGCTCCACCAGATATGAGATGCAGGCTCTTTGTCTCTaGGGTCACGTGATTGAGCTT +
Preference number: 4 (lower is better)
Translates to: GRLDAKAQIAWGSTRYEMQALCL*GHVIEL
Trigger: AAGCTCAATCACGTGACCTCAGAGACAAAGAGCCTG...CATCTCATATCTGGTGGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR TCA 90 bp GGTAGTCTGGAGATAGTGCTTCTCCTTCTGCAGAGCTTTGTCCAGCTGGGCCTGTTTCCTCATAAGCAATaGTTTCCTCTTCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSLEIVLLLLQSFVQLGLFPHKQ*FPLPAE
Trigger: CTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAA...CAGGCCCAGCTGGACAAAGCTCTGCAGAAGGAGAAGCACTATCTCCAGACTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR TCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGTCCCGATGTACTTGGTaGGGTCCATTCTTTGACCCA +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVSRCTW*GPFFDP
Trigger: TGGGTCAAAGAATGGACCTCACCAAGTACATCGGGA...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp AAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTATGGAGAAATTAACGAGGTaGTTCCTCAAGGGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: KKHPWKCCSGLDVDSSSMEKLTR*FLKGWP
Trigger: CGGCCAGCCCTTGAGGAATCACCTCGTTAATTTCTC...CATACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR GCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGTCATTGCCTCCTCCATaGAGAGCTGATTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVSLPPP*RADCPA
Trigger: TGCAGGACAATCAGCTCTGCATGGAGGAGGCAATGA...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTAAGGCGAGTTGCTCCTaGGCCAAATGGAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTKASCS*AKWSFS
Trigger: GGAGAAGCTCCATTTGGCGCAGGAGCAACTCGCCTT...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCCGCCGAGTTCCCCCTaGAACATCTTCACTTGGCAT +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTPPSSP*NIFTWH
Trigger: ATGCCAAGTGAAGATGTTGCAGGGGGAACTCGGCGG...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCCGCCGAGTTCCCCCTaGAACATCTTCACTTGGCAT +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWPPSSP*NIFTWH
Trigger: ATGCCAAGTGAAGATGTTGCAGGGGGAACTCGGCGG...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GCCTCCTCCCTTTACAGATGTGAAAACAACGATCTTTGGTCCAAAGTCGCTAAGCCGCCGAGTTCCCCCTaGAACATCTTCACTTGGCAT +
Preference number: 4 (lower is better)
Translates to: ASSLYRCENNDLWSKVAKPPSSP*NIFTWH
Trigger: ATGCCAAGTGAAGATGTTGCAGGGGGAACTCGGCGG...CTTAGCGACTTTGGACCAAAGATCGTTGTTTTCACATCTGTAAAGGGAGGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR GCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTTCCTGCAGCCGGCACTaGAGGATGGTGATGTCCTTA +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTSCSRH*RMVMSL
Trigger: TAAGGACATCACCATCCTGCAGTGCCGGCTGCAGGA...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAAGTGGCCATGCACTGCTaGTTCTCCAGCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQVAMHC*FSSSFS
Trigger: GGAGAAGGAGCTGGAGAAGCAGCAGTGCATGGCCAC...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAATCCTTGGACTTGTCCTaGTTAGCCTCCTTGACTGTC +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQESLDLS*LASLTV
Trigger: GACAGTCAAGGAGGCTAAGCAGGACAAGTCCAAGGA...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTGCCAGCCTCTCCTGCTaGTTGGCCTCTTCGAGACTG +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSASLSC*LASSRL
Trigger: CAGTCTCGAAGAGGCCAAGCAGCAGGAGAGGCTGGC...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGGCCAGCCTCTCCTGCTaGTTGGCCTCTTCGAGACTG +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVASLSC*LASSRL
Trigger: CAGTCTCGAAGAGGCCAAGCAGCAGGAGAGGCTGGC...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAGCAGCCAGCCTCTCCTaGTGCTTGGCCTCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLAASLS*CLASSR
Trigger: TCTCGAAGAGGCCAAGCAGCAGGAGAGGCTGGCTGC...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
CDS-3UTR GCA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCGCAGCCAGCCTCTCCTaGTGCTTGGCCTCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVAASLS*CLASSR
Trigger: TCTCGAAGAGGCCAAGCAGCAGGAGAGGCTGGCTGC...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
CDS-3UTR GCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTTTCTTTGCACTGGGCTaGTTGCTGAGCAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTFFALG*LLSSQP
Trigger: AGGCTGGCTGCTCAGCAAGCAGCCCAGTGCAAAGAA...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
CDS-3UTR GCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGGTGCAGCCTCTTCTTTaGACTGGGCTGCTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWVQPLL*TGLLAE
Trigger: CTCAGCAAGCAGCCCAGTGCAAAGAAGAGGCTGCAC...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGAGGAGGAGACCCTTCTaGAGTTTCCTCTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWRRRPF*SFLWVS
Trigger: GGACACCCAGAGGAAACTGCAGAAGGGTCTCCTCCT...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTTTGTCCAGCTGGGCCTaGAGGCTCATTAAGGACTCC +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTLSSWA*RLIKDS
Trigger: GGAGTCCTTAATGAGCCTGCAGGCCCAGCTGGACAA...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGTTGTCCAGCTGGGCCTaGAGGCTCATTAAGGACTCC +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWLSSWA*RLIKDS
Trigger: GGAGTCCTTAATGAGCCTGCAGGCCCAGCTGGACAA...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TCTTTCTTCAAAGTGAGCTTTTGGGTCTCGGTGAACTCCAGCTGCAGCTCCTGCGTCTGTGTCAAGCTTTaGTGCAGGCTCTTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: SFFKVSFWVSVNSSCSSCVCVKL*CRLFVS
Trigger: AGAGACAAAGAGCCTGCAGCAAAGCTTGACACAGAC...GCAGGAGCTGCAGCTGGAGTTCACCGAGACCCAAAAGCTCACTTTGAAGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTTGTTGCTTCTGCCACTaGAGCACCTGGCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTCCFCH*STWQLI
Trigger: GATGAGCTGCCAGGTGCTGCAGTGGCAGAAGCAACA...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGTTCTGGTGTTGCTTCTaGCACTGCAGCACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWFWCCF*HCSTWQ
Trigger: CTGCCAGGTGCTGCAGTGGCAGAAGCAACACCAGAA...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGTAGTCTGGAGATAGTGCTTCTCCTTCTGCAGAGCTTTGTCCAGCTGGGCCTGTGCTGTTTTGCCCATTaGTCCAAGTTGGTCATAATC +
Preference number: 4 (lower is better)
Translates to: GSLEIVLLLLQSFVQLGLCCFAH*SKLVII
Trigger: GATTATGACCAACTTGGAGCAATGGGCAAAACAGCA...CAGGCCCAGCTGGACAAAGCTCTGCAGAAGGAGAAGCACTATCTCCAGACTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp TCTTTCTTCAAAGTGAGCTTTTGGGTCTCGGTGAACTCCAGCTGCAGCTCCTGCGACCTTCTGCTGTTTTaGCCATTGCTCCAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: SFFKVSFWVSVNSSCSSCDLLLF*PLLQVG
Trigger: ACCAACTTGGAGCAATGGGCAAAACAGCAGAAGGTC...GCAGGAGCTGCAGCTGGAGTTCACCGAGACCCAAAAGCTCACTTTGAAGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp CCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCGACCTTCTGCTGTTTTaGCCATTGCTCCAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: PLKKHPWKCCSGLDVDSSDLLLF*PLLQVG
Trigger: ACCAACTTGGAGCAATGGGCAAAACAGCAGAAGGTC...GCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGGGCCTAGGGCTTTGGTaGATAGCCTTGTGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWGLGLW*IALCSR
Trigger: CCGAGAACACAAGGCTATGCACCAAAGCCCTAGGCC...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGGTGTGGACTCCGTTCTaGTCGGGCCTAGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVVWTPF*SGLGLW
Trigger: CCAAAGCCCTAGGCCCGAGCAGAACGGAGTCCACAC...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTGCCAGGCAGCTCTGCTaGAGGGTGACTTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSARQLC*RVTSCL
Trigger: GAGGCAAGAAGTCACCCTGCAGCAGAGCTGCCTGGC...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATGAGGGTATCTGTGGGTaGCTGTACAGGAAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDEGICG*LYRKQN
Trigger: ATTTTGCTTCCTGTACAGCCACCCACAGATACCCTC...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp AGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTAGAGCTGAGGGTATCTGTGGGTaGCTGTACAGGAAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: RNISLAQQPGANGEGSRAEGICG*LYRKQN
Trigger: ATTTTGCTTCCTGTACAGCCACCCACAGATACCCTC...AGCTCTACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTTCAAAGTGAGCTTTTaGGTCTCGGTGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDFKVSF*VSVNSS
Trigger: GCTGGAGTTCACCGAGACCCAAAAGCTCACTTTGAA...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CTAAAATGTAACATTGGAAGACTTGATGCCAAAGCCCAAATAGCTTGGGGCTCCCTGTTCTTCAGCTTCTaGACCTCAGCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LKCNIGRLDAKAQIAWGSLFFSF*TSACRA
Trigger: GGCCCTGCAGGCTGAGGTCCAGAAGCTGAAGAACAG...GGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCCAATGTTACATTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CCA 90 bp AGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTAGAGCTCCACCCGTTTTCTGTTaGAGGTTTGTTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: RNISLAQQPGANGEGSRAPPVFC*RFVPSQ
Trigger: CTGAGAAGGAACAAACCTCCAACAGAAAACGGGTGG...AGCTCTACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATCCACCCGTTTTCTGTTaGAGGTTTGTTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDPPVFC*RFVPSQ
Trigger: CTGAGAAGGAACAAACCTCCAACAGAAAACGGGTGG...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp AAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTATGAGAGCTTTGTCCAGCTaGGCCTGCAGGCTCATTAAG +
Preference number: 4 (lower is better)
Translates to: KKHPWKCCSGLDVDSSSMRALSS*ACRLIK
Trigger: CTTAATGAGCCTGCAGGCCCAGCTGGACAAAGCTCT...CATACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTGTGTCAGGTCATCCTaGCAGGCGGCTGACTTCCGG +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSCVRSS*QAADFR
Trigger: CCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACA...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGTGTCAGGTCATCCTaGCAGGCGGCTGACTTCCGG +
Preference number: 4 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPCVRSS*QAADFR
Trigger: CCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACA...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CTCTGCTGCAGGGTGACTTCTTGCCTCTGGGGTAACATGGAGTTTACAGGTGGCTTCCTAGTTTCTCATTaGCGACCTTCTGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: LCCRVTSCLWGNMEFTGGFLVSH*RPSAVL
Trigger: CAAAACAGCAGAAGGTCGCCAATGAGAAACTAGGAA...GCCACCTGTAAACTCCATGTTACCCCAGAGGCAAGAAGTCACCCTGCAGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CCA 90 bp CCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCTTTTCCTGCTGCAAGTaGACCATTACACTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PLKKHPWKCCSGLDVDSSFSCCK*TITLWR
Trigger: CCTCCACAGTGTAATGGTCCACTTGCAGCAGGAAAA...GCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GGTCTGAGATGTGAGGCACTTGGGTATGCTTCAGATGTTCTTAGATCAGAAGGGTCGGGCCTAGGGCTTTaGTGCATAGCCTTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: GLRCEALGYASDVLRSEGSGLGL*CIALCS
Trigger: AGAACACAAGGCTATGCACCAAAGCCCTAGGCCCGA...CCCTTCTGATCTAAGAACATCTGAAGCATACCCAAGTGCCTCACATCTCAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGAGGAACCCGGGCAGTaGGGCATCCCGATGTACTTG +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSEEPGQ*GIPMYL
Trigger: CAAGTACATCGGGATGCCCCACTGCCCGGGTTCCTC...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
CDS-3UTR CCA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCAGAGGAACCCGGGCAGTaGGGCATCCCGATGTACTTG +
Preference number: 4 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPEEPGQ*GIPMYL
Trigger: CAAGTACATCGGGATGCCCCACTGCCCGGGTTCCTC...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
CDS-3UTR CCA 90 bp CTTGTAGTTTTATCAAAGCCTTTTCACGCTCCAGAACCAAAGCGTTACTGCAGGGCTGCTGGCTCTGGTTaGTTCCCTGTCCTTTTCGCC +
Preference number: 4 (lower is better)
Translates to: LVVLSKPFHAPEPKRYCRAAGSG*FPVLFA
Trigger: GGCGAAAAGGACAGGGAACCAACCAGAGCCAGCAGC...CCTGCAGTAACGCTTTGGTTCTGGAGCGTGAAAAGGCTTTGATAAAACTACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CCA 90 bp CCATTGCTCCAAGTTGGTCATAATCTGATCATTCCCTCGGTAGAGCCTACAGGTTGGACCATTACACTGTaGAGGTGGCTGTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: PLLQVGHNLIIPSVEPTGWTITL*RWLWEG
Trigger: TCCTTCCCACAGCCACCTCCACAGTGTAATGGTCCA...ACCTGTAGGCTCTACCGAGGGAATGATCAGATTATGACCAACTTGGAGCAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGGACGTACCCGGGCAGTaGGGCATCCCGATGTACTTG +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVDVPGQ*GIPMYL
Trigger: CAAGTACATCGGGATGCCCCACTGCCCGGGTACGTC...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR TCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAACCTGTGTTCTCGTTGTaGTTTCCCATTTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQEPVFSL*FPISSS
Trigger: TGAGGAGGAAATGGGAAATCACAACGAGAACACAGG...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TTCCTGCCGCAAAGCTTCAAGTTCTCCCTCCATCAGCTTCTCATGCTCTTTGCTCCTGTGTTCTCGTTGTaGTTTCCCATTTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: FLPQSFKFSLHQLLMLFAPVFSL*FPISSS
Trigger: TGAGGAGGAAATGGGAAATCACAACGAGAACACAGG...AGCAAAGAGCATGAGAAGCTGATGGAGGGAGAACTTGAAGCTTTGCGGCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAATCCGTACCTTTGAATaGTCACCCTTGTTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQEIRTFE*SPLFSG
Trigger: GCCTGAGAACAAGGGTGATCATTCAAAGGTACGGAT...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGATCCGTACCTTTGAATaGTCACCCTTGTTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVIRTFE*SPLFSG
Trigger: GCCTGAGAACAAGGGTGATCATTCAAAGGTACGGAT...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp AGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTAGAGCTAGCTTTGTGGCCTCCTaGAGATCTTCTTCTAACTTG +
Preference number: 4 (lower is better)
Translates to: RNISLAQQPGANGEGSRASFVAS*RSSSNL
Trigger: CAAGTTAGAAGAAGATCTTCAGGAGGCCACAAAGCT...AGCTCTACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR TCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATAGCTTTGTGGCCTCCTaGAGATCTTCTTCTAACTTG +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDSFVAS*RSSSNL
Trigger: CAAGTTAGAAGAAGATCTTCAGGAGGCCACAAAGCT...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp AGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTAGAGCTTATTCAAGTCTTGGATaGCTTGCTGGCTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: RNISLAQQPGANGEGSRAYSSLG*LAGWCC
Trigger: ACAACACCAGCCAGCAAGTCATCCAAGACTTGAATA...AGCTCTACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR TCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAACAGGCTCTTTGTCTCTaGGGTCACGTGATTGAGCTT +
Preference number: 4 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKQALCL*GHVIEL
Trigger: AAGCTCAATCACGTGACCTCAGAGACAAAGAGCCTG...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTGTGAGGTCCATTCTTTaGCCCATATCCTGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTVRSIL*PISWGN
Trigger: GTTGCCCCAGGATATGGGTCAAAGAATGGACCTCAC...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAATCCCGATGTACTTGGTaGGGTCCATTCTTTGACCCA +
Preference number: 4 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKSRCTW*GPFFDP
Trigger: TGGGTCAAAGAATGGACCTCACCAAGTACATCGGGA...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAACTCACTGTCCTCTaGAGAAACACCCGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQELTVL*RNTRGN
Trigger: ATTTCCACGGGTGTTTCTTCAGAGGACAGTGAGTTC...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAGCTTGCTGTTCAGGCTaGTCACTTCTCTGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKACCSG*SLLCLS
Trigger: AGAGAGACAGAGAAGTGAGCAGCCTGAACAGCAAGC...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAATCATTGCCTCCTCCATaGAGAGCTGATTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKSLPPP*RADCPA
Trigger: TGCAGGACAATCAGCTCTGCATGGAGGAGGCAATGA...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAAGTGGCTGCTGTTCATTaGCTCCTCCATGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQVAAVH*LLHAEL
Trigger: CAGCTCTGCATGGAGGAGGCAATGAACAGCAGCCAC...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGGCTTCTTGTCGTGGCTaGTGTTCATTGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWASCRG*CSLPPP
Trigger: TGGAGGAGGCAATGAACAGCAGCCACGACAAGAAGC...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR GCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAACACTGGCTGTCTTTCTaGTCCTGCAAGTGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKHWLSF*SCKCFS
Trigger: ACTGAAGCACTTGCAGGAGCAGAAAGACAGCCAGTG...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp AAAGCCCAAATAGCTTGGGGCTCCACCAGATATGAGATGAGACCTTCCACATATTGGTACTCCTCCACATaGAGGCACTGGCTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: KAQIAWGSTRYEMRPSTYWYSST*RHWLSF
Trigger: GAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCA...ATATGTGGAAGGTCTCATCTCATATCTGGTGGAGCCCCAAGCTATTTGGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR GCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAAGTTCTGTGGCCATaGACTGCTGCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWQVLWP*TAASPA
Trigger: AGCTGGAGAAGCAGCAGTGCATGGCCACAGAACTTG...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAATCCTTGGACTTGTCCTaGTTAGCCTCCTTGACTGTC +
Preference number: 4 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKSLDLS*LASLTV
Trigger: GACAGTCAAGGAGGCTAAGCAGGACAAGTCCAAGGA...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp AGGGAGGAAATGAGAGTTTTGATTCGAGGAGAAATTAACGAGGTGATTCCTCAAGCCAGCCTCTCCTGCTaGTTGGCCTCTTCGAGACTG +
Preference number: 4 (lower is better)
Translates to: REEMRVLIRGEINEVIPQASLSC*LASSRL
Trigger: CAGTCTCGAAGAGGCCAAGCAGCAGGAGAGGCTGGC...TTGAGGAATCACCTCGTTAATTTCTCCTCGAATCAAAACTCTCATTTCCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR GCA 90 bp CTAAAATGTAACATTGGAAGACTTGATGCCAAAGCCCAAATAGCTTGGGGCTCCTTCTTTGCACTGGGCTaGTTGCTGAGCAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LKCNIGRLDAKAQIAWGSFFALG*LLSSQP
Trigger: AGGCTGGCTGCTCAGCAAGCAGCCCAGTGCAAAGAA...GGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCCAATGTTACATTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR GCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGTTGCTCTTCTTCAACTaGTCCCGTTTGTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQLLFFN*SRLSSR
Trigger: TCTGGAGGACAAACGGGAGCAGTTGAAGAAGAGCAA...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGAAGACTTGATGCCAAAGCCCAAATAGCTTGGGGCTCCACCAGATATGAGATGTTGCTCTTCTTCAACTaGTCCCGTTTGTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GRLDAKAQIAWGSTRYEMLLFFN*SRLSSR
Trigger: TCTGGAGGACAAACGGGAGCAGTTGAAGAAGAGCAA...CATCTCATATCTGGTGGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR GCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAATTGTCCAGCTGGGCCTaGAGGCTCATTAAGGACTCC +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQLSSWA*RLIKDS
Trigger: GGAGTCCTTAATGAGCCTGCAGGCCCAGCTGGACAA...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTTGTGTCAAGCTTTGCTaGAGGCTCTTTGTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LKKHPWKCCSGLDVDSSSCVKLC*RLFVSE
Trigger: CTCAGAGACAAAGAGCCTGCAGCAAAGCTTGACACA...ACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TCTGAGTCTCCTGATGCTCTTGAATCATGCAAGGAGAAGTGTATATCCGTACCTTTCTGGTGTTGCTTCTaGCACTGCAGCACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SESPDALESCKEKCISVPFWCCF*HCSTWQ
Trigger: CTGCCAGGTGCTGCAGTGGCAGAAGCAACACCAGAA...AGGTACGGATATACACTTCTCCTTGCATGATTCAAGAGCATCAGGAGACTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGACCTTCTGCTGTTTTaGCCATTGCTCCAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQEDLLLF*PLLQVG
Trigger: ACCAACTTGGAGCAATGGGCAAAACAGCAGAAGGTC...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGCAATGTATTTCACCTaGTCTCGGAGCTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQEAMYFT*SRSWFP
Trigger: AGGAAACCAGCTCCGAGAGCAGGTGAAATACATTGC...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp AGCTCATCTCCTCTAGCTTCTTGTCAAAGGCGTGCACCTCCAGCTCACTCTCCTTTCTTGTTTTCCTGCTaGAAGTGGACCATTACACTG +
Preference number: 4 (lower is better)
Translates to: SSSPLASCQRRAPPAHSPFLFSC*KWTITL
Trigger: CAGTGTAATGGTCCACTTGCAGCAGGAAAACAAGAA...AGGAGAGTGAGCTGGAGGTGCACGCCTTTGACAAGAAGCTAGAGGAGATGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCACCCGTGGAAATGCTaGTCAGGGCTAGATGTGGAT +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTHPWKC*SGLDVD
Trigger: ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTG...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTATCCATAGCAGACGCTaGTCCCCTTGTATCACTATG +
Preference number: 4 (lower is better)
Translates to: LKKHPWKCCSGLDVDSSSIHSRR*SPCITM
Trigger: CATAGTGATACAAGGGGAGCAGCGTCTGCTATGGAT...ACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGGTAGGTGGCTGGGGTaGTCTTACGGGGTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSGRWLG*SYGVSR
Trigger: TCTGGAAACCCCGTAAGAGCACCCCAGCCACCTACC...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAGGGTATCTGTGGGTaGCTGTACAGGAAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQEGICG*LYRKQN
Trigger: ATTTTGCTTCCTGTACAGCCACCCACAGATACCCTC...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GCCTCCTCCCTTTACAGATGTGAAAACAACGATCTTTGGTCCAAAGTCGCTAAGTCCTTCACCAGGTTCTaGTACTCCTCCACATGCAGG +
Preference number: 4 (lower is better)
Translates to: ASSLYRCENNDLWSKVAKSFTRF*YSSTCR
Trigger: CCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGGA...CTTAGCGACTTTGGACCAAAGATCGTTGTTTTCACATCTGTAAAGGGAGGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTCTGTTCTTCAGCTTCTaGACCTCAGCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSLFFSF*TSACRA
Trigger: GGCCCTGCAGGCTGAGGTCCAGAAGCTGAAGAACAG...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCCTGTTCTTCAGCTTCTaGACCTCAGCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVLFFSF*TSACRA
Trigger: GGCCCTGCAGGCTGAGGTCCAGAAGCTGAAGAACAG...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGCTGTTCTTCAGCTTCTaGACCTCAGCCTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVLFFSF*TSACRA
Trigger: GGCCCTGCAGGCTGAGGTCCAGAAGCTGAAGAACAG...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAAGCCTCTCCTGCTGCTTaGCCTCTTCGAGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQASPAA*PLRDCS
Trigger: AGAACAGTCTCGAAGAGGCCAAGCAGCAGGAGAGGC...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGCCACCCGTTTTCTGTTaGAGGTTTGTTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQPPVFC*RFVPSQ
Trigger: CTGAGAAGGAACAAACCTCCAACAGAAAACGGGTGG...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTTGCCACTGCAGCACCTaGCAGCTCATCTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSCHCST*QLISSS
Trigger: GCTAGAGGAGATGAGCTGCCAGGTGCTGCAGTGGCA...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTGCCACTGCAGCACCTaGCAGCTCATCTCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVCHCST*QLISSS
Trigger: GCTAGAGGAGATGAGCTGCCAGGTGCTGCAGTGGCA...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTGCCTACAGGTGTCTTTaGGCACAGACCACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSAYRCL*AQTTGA
Trigger: TGCCCCAGTGGTCTGTGCCCAAAGACACCTGTAGGC...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GCTCTTGAATCATGCAAGGAGAAGTGTATATCCGTACCTTTGAATGATCACCCTGCCTACAGGTGTCTTTaGGCACAGACCACTGGGGCA +
Preference number: 4 (lower is better)
Translates to: ALESCKEKCISVPLNDHPAYRCL*AQTTGA
Trigger: TGCCCCAGTGGTCTGTGCCCAAAGACACCTGTAGGC...AGGGTGATCATTCAAAGGTACGGATATACACTTCTCCTTGCATGATTCAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGACCTGCTCTCGGAGCTaGTTTCCTAGTTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVTCSRS*FPSFSL
Trigger: CAATGAGAAACTAGGAAACCAGCTCCGAGAGCAGGT...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAACCTGCTCTCGGAGCTaGTTTCCTAGTTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQETCSRS*FPSFSL
Trigger: CAATGAGAAACTAGGAAACCAGCTCCGAGAGCAGGT...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TGCATCATAGGCTTCTTTGGTGATGGTAGTCTGGAGATAGTGCTTCTCCTTCTGTCGGGCCTAGGGCTTTaGTGCATAGCCTTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: CIIGFFGDGSLEIVLLLLSGLGL*CIALCS
Trigger: AGAACACAAGGCTATGCACCAAAGCCCTAGGCCCGA...CAGAAGGAGAAGCACTATCTCCAGACTACCATCACCAAAGAAGCCTATGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTCTTTCTCCCTCTGTGTaGACTCCGTTCTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSLSPSV*TPFCSG
Trigger: GCCCGAGCAGAACGGAGTCCACACAGAGGGAGAAAG...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp AAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTATGCTGAAGAAACACCCGTaGAAATGCTGCTCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: KKHPWKCCSGLDVDSSSMLKKHP*KCCSGL
Trigger: TAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAG...CATACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCTCTTGCAAAATAGGCTaGGACCGTGATATACTCCTG +
Preference number: 4 (lower is better)
Translates to: PLKKHPWKCCSGLDVDSSSCKIG*DRDILL
Trigger: CAGGAGTATATCACGGTCCCAGCCTATTTTGCAAGA...GCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp AGCTCATCTCCTCTAGCTTCTTGTCAAAGGCGTGCACCTCCAGCTCACTCTCCTCTCCATGGCAGGAAGTaGACAAAACTCAACAAAAGT +
Preference number: 4 (lower is better)
Translates to: SSSPLASCQRRAPPAHSPLHGRK*TKLNKS
Trigger: ACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAG...AGGAGAGTGAGCTGGAGGTGCACGCCTTTGACAAGAAGCTAGAGGAGATGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATCTAAAGCTCACTCCATaGCAGGAAGTGGACAAAACT +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDLKLTP*QEVDKT
Trigger: AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TGTGCTCATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGACCTGTTCCCTAAAATaGGTCTGGGTCAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: CAHAHVFISEFGPGDGSMTCSLK*VWVRGG
Trigger: CCCTCCCCTGACCCAGACCCATTTTAGGGAACAGGT...CATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATGAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CCA 90 bp AGGGAGGAAATGAGAGTTTTGATTCGAGGAGAAATTAACGAGGTGATTCCTCAAGGCTGGGTAGGTGGCTaGGGTGCTCTTACGGGGTTT +
Preference number: 4 (lower is better)
Translates to: REEMRVLIRGEINEVIPQGWVGG*GALTGF
Trigger: AAACCCCGTAAGAGCACCCCAGCCACCTACCCAGCC...TTGAGGAATCACCTCGTTAATTTCTCCTCGAATCAAAACTCTCATTTCCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR TCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGCATCGTGCAGATTCTTaGTGTCAAGTTGCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQHRADS*CQVAGL
Trigger: TAAGCCTGCAACTTGACATCAAGAATCTGCACGATG...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp AAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTATGCCTGTGTTCTCGTTGTaGTTTCCCATTTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KKHPWKCCSGLDVDSSSMPVFSL*FPISSS
Trigger: TGAGGAGGAAATGGGAAATCACAACGAGAACACAGG...CATACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp AGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTAGAGCTGTATATCCGTACCTTTaGATGATCACCCTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: RNISLAQQPGANGEGSRAVYPYL*MITLVL
Trigger: GAGAACAAGGGTGATCATTCAAAGGTACGGATATAC...AGCTCTACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR TCA 90 bp TATGGAAGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTATGAGATCATCCTGTTaGGAGACCTTTTGCCAGACT +
Preference number: 4 (lower is better)
Translates to: YGRNISLAQQPGANGEGSMRSSC*ETFCQT
Trigger: AGTCTGGCAAAAGGTCTCTCAACAGGATGATCTCAT...ACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCTTCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR TCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAAGGCACTGCAGGATGGTaGTGTCCTTATCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQGTAGW*CPYPSS
Trigger: AGAGGAAGGATAAGGACATCACCATCCTGCAGTGCC...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp CTAAAATGTAACATTGGAAGACTTGATGCCAAAGCCCAAATAGCTTGGGGCTCCGGCACTGCAGGATGGTaGTGTCCTTATCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LKCNIGRLDAKAQIAWGSGTAGW*CPYPSS
Trigger: AGAGGAAGGATAAGGACATCACCATCCTGCAGTGCC...GGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCCAATGTTACATTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR TCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAATTCAGGAGGCTGTTCTaGACCTGTGTCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKFRRLF*TCVSFF
Trigger: GAAGAAACTGACACAGGTTCAGAACAGCCTCCTGAA...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCCCTGTGCTGGTGCTTaGTACGATCAAGCATGTCAT +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTPCAGA*YDQACH
Trigger: ATGACATGCTTGATCGTATCAAGCACCAGCACAGGG...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp AAAGCCCAAATAGCTTGGGGCTCCACCAGATATGAGATGAGACCTTCCACATATCCCTGTGCTGGTGCTTaGTACGATCAAGCATGTCAT +
Preference number: 4 (lower is better)
Translates to: KAQIAWGSTRYEMRPSTYPCAGA*YDQACH
Trigger: ATGACATGCTTGATCGTATCAAGCACCAGCACAGGG...ATATGTGGAAGGTCTCATCTCATATCTGGTGGAGCCCCAAGCTATTTGGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR TCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGAGCTTTGTGGCCTCCTaGAGATCTTCTTCTAACTTG +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQSFVAS*RSSSNL
Trigger: CAAGTTAGAAGAAGATCTTCAGGAGGCCACAAAGCT...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAATATTCAAGTCTTGGATaGCTTGCTGGCTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQEYSSLG*LAGWCC
Trigger: ACAACACCAGCCAGCAAGTCATCCAAGACTTGAATA...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGTATTCAAGTCTTGGATaGCTTGCTGGCTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQYSSLG*LAGWCC
Trigger: ACAACACCAGCCAGCAAGTCATCCAAGACTTGAATA...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTGTCTCTGAGGTCACGTaGTTGAGCTTCTCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSVSEVT*LSFSRA
Trigger: AGCCCTCGAGAAGCTCAATCACGTGACCTCAGAGAC...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGGTCTCTGAGGTCACGTaGTTGAGCTTCTCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVVSEVT*LSFSRA
Trigger: AGCCCTCGAGAAGCTCAATCACGTGACCTCAGAGAC...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAGGCTCTTTGTCTCTaGGGTCACGTGATTGAGCTT +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTQALCL*GHVIEL
Trigger: AAGCTCAATCACGTGACCTCAGAGACAAAGAGCCTG...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TCTGAGTCTCCTGATGCTCTTGAATCATGCAAGGAGAAGTGTATATCCGTACCTGTGAGGTCCATTCTTTaGCCCATATCCTGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: SESPDALESCKEKCISVPVRSIL*PISWGN
Trigger: GTTGCCCCAGGATATGGGTCAAAGAATGGACCTCAC...AGGTACGGATATACACTTCTCCTTGCATGATTCAAGAGCATCAGGAGACTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp GCCTCCTCCCTTTACAGATGTGAAAACAACGATCTTTGGTCCAAAGTCGCTAAGTCCCGATGTACTTGGTaGGGTCCATTCTTTGACCCA +
Preference number: 4 (lower is better)
Translates to: ASSLYRCENNDLWSKVAKSRCTW*GPFFDP
Trigger: TGGGTCAAAGAATGGACCTCACCAAGTACATCGGGA...CTTAGCGACTTTGGACCAAAGATCGTTGTTTTCACATCTGTAAAGGGAGGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR TCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTTACTCCTGTAAGAGCTaGTCCAGGTCAAGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTYSCKS*SRSRER
Trigger: CCTCTCTCTTGACCTGGATCAGCTCTTACAGGAGTA...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TATGGAAGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTCCACCAGATATGAGATaGGACCTTCCACATATGGAA +
Preference number: 4 (lower is better)
Translates to: YGRNISLAQQPGANGEGSPPDMR*DLPHME
Trigger: TTCCATATGTGGAAGGTCTCATCTCATATCTGGTGG...ACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCTTCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR GCA 90 bp TGCATCATAGGCTTCTTTGGTGATGGTAGTCTGGAGATAGTGCTTCTCCTTCTGGCTTGCTGTTCAGGCTaGTCACTTCTCTGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: CIIGFFGDGSLEIVLLLLACCSG*SLLCLS
Trigger: AGAGAGACAGAGAAGTGAGCAGCCTGAACAGCAAGC...CAGAAGGAGAAGCACTATCTCCAGACTACCATCACCAAAGAAGCCTATGATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAATCTTCCTCTGTCTCTTaGAGACATCGTGCAGATTCT +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQESSSVS*RHRADS
Trigger: AGAATCTGCACGATGTCTGCAAGAGACAGAGGAAGA...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGTCTTCCTCTGTCTCTTaGAGACATCGTGCAGATTCT +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQSSSVS*RHRADS
Trigger: AGAATCTGCACGATGTCTGCAAGAGACAGAGGAAGA...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGGTGGCTGCTGTTCATTaGCTCCTCCATGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVVAAVH*LLHAEL
Trigger: CAGCTCTGCATGGAGGAGGCAATGAACAGCAGCCAC...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCAAGGCGAGTTGCTCCTaGGCCAAATGGAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVKASCS*AKWSFS
Trigger: GGAGAAGCTCCATTTGGCGCAGGAGCAACTCGCCTT...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATCTAGTAACTCGATGTTaGTCAGGGAAGACTGGTATT +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDLVTRC*SGKTGI
Trigger: AATACCAGTCTTCCCTGAGCAACATCGAGTTACTAG...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAACCAAAGCGTTACTaGAGGCCAGCTTATTTCGAA +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQEPKRY*RPAYFE
Trigger: TTCGAAATAAGCTGGCCTGCAGTAACGCTTTGGTTC...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGAACCAAAGCGTTACTaGAGGCCAGCTTATTTCGAA +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVEPKRY*RPAYFE
Trigger: TTCGAAATAAGCTGGCCTGCAGTAACGCTTTGGTTC...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TATGGAAGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTGAACCAAAGCGTTACTaGAGGCCAGCTTATTTCGAA +
Preference number: 4 (lower is better)
Translates to: YGRNISLAQQPGANGEGSEPKRY*RPAYFE
Trigger: TTCGAAATAAGCTGGCCTGCAGTAACGCTTTGGTTC...ACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCTTCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR GCA 90 bp TGCATCATAGGCTTCTTTGGTGATGGTAGTCTGGAGATAGTGCTTCTCCTTCTGCACTGGCTGTCTTTCTaGTCCTGCAAGTGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: CIIGFFGDGSLEIVLLLLHWLSF*SCKCFS
Trigger: ACTGAAGCACTTGCAGGAGCAGAAAGACAGCCAGTG...CAGAAGGAGAAGCACTATCTCCAGACTACCATCACCAAAGAAGCCTATGATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR GCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAATGGTACTCCTCCACATaGAGGCACTGGCTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQWYSST*RHWLSF
Trigger: GAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCA...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTATCCTGCAGCCGGCACTaGAGGATGGTGATGTCCTTA +
Preference number: 4 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLSCSRH*RMVMSL
Trigger: TAAGGACATCACCATCCTGCAGTGCCGGCTGCAGGA...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTATCTGTGGCCATGCACTaGTGCTTCTCCAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLSVAMH*CFSSSF
Trigger: GAAGGAGCTGGAGAAGCAGCAGTGCATGGCCACAGA...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGTCCTTGGACTTGTCCTaGTTAGCCTCCTTGACTGTC +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWSLDLS*LASLTV
Trigger: GACAGTCAAGGAGGCTAAGCAGGACAAGTCCAAGGA...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp AAAGCCCAAATAGCTTGGGGCTCCACCAGATATGAGATGAGACCTTCCACATATTCCTTGGACTTGTCCTaGTTAGCCTCCTTGACTGTC +
Preference number: 4 (lower is better)
Translates to: KAQIAWGSTRYEMRPSTYSLDLS*LASLTV
Trigger: GACAGTCAAGGAGGCTAAGCAGGACAAGTCCAAGGA...ATATGTGGAAGGTCTCATCTCATATCTGGTGGAGCCCCAAGCTATTTGGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR GCA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTATTCTTTGCACTGGGCTaGTTGCTGAGCAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLFFALG*LLSSQP
Trigger: AGGCTGGCTGCTCAGCAAGCAGCCCAGTGCAAAGAA...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
CDS-3UTR GCA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCGTGCAGCCTCTTCTTTaGACTGGGCTGCTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVVQPLL*TGLLAE
Trigger: CTCAGCAAGCAGCCCAGTGCAAAGAAGAGGCTGCAC...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTGCAGCCTCTTCTTTaGACTGGGCTGCTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSVQPLL*TGLLAE
Trigger: CTCAGCAAGCAGCCCAGTGCAAAGAAGAGGCTGCAC...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTGTGACAGCCTGCCAGTaGAGCCTCTTCTTTGCACTG +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSVTACQ*SLFFAL
Trigger: CAGTGCAAAGAAGAGGCTGCACTGGCAGGCTGTCAC...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCGTGACAGCCTGCCAGTaGAGCCTCTTCTTTGCACTG +
Preference number: 4 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVVTACQ*SLFFAL
Trigger: CAGTGCAAAGAAGAGGCTGCACTGGCAGGCTGTCAC...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGCTCCAGGTGACAGCCTaGCAGTGCAGCCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVLQVTA*QCSLFF
Trigger: AAAGAAGAGGCTGCACTGGCAGGCTGTCACCTGGAG...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTCTCCAGGTGACAGCCTaGCAGTGCAGCCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSLQVTA*QCSLFF
Trigger: AAAGAAGAGGCTGCACTGGCAGGCTGTCACCTGGAG...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GAAATGAGAGTTTTGATTCGAGGAGAAATTAACGAGGTGATTCCTCAAGGGCTGCTCCAGGTGACAGCCTaGCAGTGCAGCCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: EMRVLIRGEINEVIPQGLLQVTA*QCSLFF
Trigger: AAAGAAGAGGCTGCACTGGCAGGCTGTCACCTGGAG...CAGCCCTTGAGGAATCACCTCGTTAATTTCTCCTCGAATCAAAACTCTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR GCA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAGGAGGAGACCCTTCTaGAGTTTCCTCTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLRRRPF*SFLWVS
Trigger: GGACACCCAGAGGAAACTGCAGAAGGGTCTCCTCCT...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTATGGTGTCTGCCTTCTaGTTGTCCAGGAGGAGACCC +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSMVSAF*LSRRRP
Trigger: GGGTCTCCTCCTGGACAAGCAGAAGGCAGACACCAT...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTATGGTGTCTGCCTTCTaGTTGTCCAGGAGGAGACCC +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSMVSAF*LSRRRP
Trigger: GGGTCTCCTCCTGGACAAGCAGAAGGCAGACACCAT...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TGCATCATAGGCTTCTTTGGTGATGGTAGTCTGGAGATAGTGCTTCTCCTTCTGTGCTCCCTGTGCTGGTaGTTGATACGATCAAGCATG +
Preference number: 4 (lower is better)
Translates to: CIIGFFGDGSLEIVLLLLCSLCW*LIRSSM
Trigger: CATGCTTGATCGTATCAAGCACCAGCACAGGGAGCA...CAGAAGGAGAAGCACTATCTCCAGACTACCATCACCAAAGAAGCCTATGATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR GCA 90 bp TGTGCTCATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGAGCCTTGCTCCCTGTaGTGGTGCTTGATACGATCA +
Preference number: 4 (lower is better)
Translates to: CAHAHVFISEFGPGDGSMEPCSL*WCLIRS
Trigger: TGATCGTATCAAGCACCAGCACAGGGAGCAAGGCTC...CATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATGAGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR GCA 90 bp AAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTATGTTGCTCTTCTTCAACTaGTCCCGTTTGTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: KKHPWKCCSGLDVDSSSMLLFFN*SRLSSR
Trigger: TCTGGAGGACAAACGGGAGCAGTTGAAGAAGAGCAA...CATACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAGTCTGTGTCAAGCTTTaGTGCAGGCTCTTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKVCVKL*CRLFVS
Trigger: AGAGACAAAGAGCCTGCAGCAAAGCTTGACACAGAC...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGTTGCTTCTGCCACTaGAGCACCTGGCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPCCFCH*STWQLI
Trigger: GATGAGCTGCCAGGTGCTGCAGTGGCAGAAGCAACA...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTGTTGCTTCTGCCACTaGAGCACCTGGCAGCTCATC +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVCCFCH*STWQLI
Trigger: GATGAGCTGCCAGGTGCTGCAGTGGCAGAAGCAACA...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTATTCTGGTGTTGCTTCTaGCACTGCAGCACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLFWCCF*HCSTWQ
Trigger: CTGCCAGGTGCTGCAGTGGCAGAAGCAACACCAGAA...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTTCATTGGCGACCTTCTaGTGTTTTGCCCATTGCTCC +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTSLATF*CFAHCS
Trigger: GGAGCAATGGGCAAAACAGCAGAAGGTCGCCAATGA...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTTCTTGTTTTCCTGCTaGAAGTGGACCATTACACTG +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDFLFSC*KWTITL
Trigger: CAGTGTAATGGTCCACTTGCAGCAGGAAAACAAGAA...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGGGCCTAGGGCTTTGGTaGATAGCCTTGTGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVGLGLW*IALCSR
Trigger: CCGAGAACACAAGGCTATGCACCAAAGCCCTAGGCC...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GAAATGAGAGTTTTGATTCGAGGAGAAATTAACGAGGTGATTCCTCAAGGGCTGGGCCTAGGGCTTTGGTaGATAGCCTTGTGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: EMRVLIRGEINEVIPQGLGLGLW*IALCSR
Trigger: CCGAGAACACAAGGCTATGCACCAAAGCCCTAGGCC...CAGCCCTTGAGGAATCACCTCGTTAATTTCTCCTCGAATCAAAACTCTCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR GCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGAAACACCCGTGGAAATaGTGCTCAGGGCTAGATGTG +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWKHPWK*CSGLDV
Trigger: CACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTT...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAATCCATAGCAGACGCTaGTCCCCTTGTATCACTATG +
Preference number: 4 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKIHSRR*SPCITM
Trigger: CATAGTGATACAAGGGGAGCAGCGTCTGCTATGGAT...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355636.10
ENST00000379073.9
CDS-3UTR GCA 90 bp AAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTATGGACGTAGAAGGAAGATaGCTCTTCTACCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: KKHPWKCCSGLDVDSSSMDVEGR*LFYLFP
Trigger: AGGGAACAGGTAGAAGAGGCATCTTCCTTCTACGTC...CATACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CCA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTATGCTCCTGCGCCAAATaGAGCTTCTCCCCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLCSCAK*SFSPVF
Trigger: GAACACAGGGGAGAAGCTCCATTTGGCGCAGGAGCA...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCCACATGCAGGCACTaGCTGTCTTTCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVSTCRH*LSFCSC
Trigger: GCAGGAGCAGAAAGACAGCCAGTGCCTGCATGTGGA...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTTCCACATGCAGGCACTaGCTGTCTTTCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSSTCRH*LSFCSC
Trigger: GCAGGAGCAGAAAGACAGCCAGTGCCTGCATGTGGA...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAATTCAAAGTGAGCTTTTaGGTCTCGGTGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKFKVSF*VSVNSS
Trigger: GCTGGAGTTCACCGAGACCCAAAAGCTCACTTTGAA...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGTCATTTCAAGTTCTGTaGCCATGCACTGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVSFQVL*PCTAAS
Trigger: AGAAGCAGCAGTGCATGGCCACAGAACTTGAAATGA...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTGCCTCTCCTGCTGCTTaGCCTCTTCGAGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSASPAA*PLRDCS
Trigger: AGAACAGTCTCGAAGAGGCCAAGCAGCAGGAGAGGC...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGCCTCTCCTGCTGCTTaGCCTCTTCGAGACTGTTCT +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSASPAA*PLRDCS
Trigger: AGAACAGTCTCGAAGAGGCCAAGCAGCAGGAGAGGC...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CTTGTAGTTTTATCAAAGCCTTTTCACGCTCCAGAACCAAAGCGTTACTGCAGGAGCTCACTCTCCTGGTaGAAGCCCCGCAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LVVLSKPFHAPEPKRYCRSSLSW*KPRSFL
Trigger: AAGAAAACTGCGGGGCTTCCACCAGGAGAGTGAGCT...CCTGCAGTAACGCTTTGGTTCTGGAGCGTGAAAAGGCTTTGATAAAACTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCCAGCTCACTCTCCTaGTGGAAGCCCCGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVSSSLS*WKPRSF
Trigger: AAAACTGCGGGGCTTCCACCAGGAGAGTGAGCTGGA...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTATCCAGCTCACTCTCCTaGTGGAAGCCCCGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLSSSLS*WKPRSF
Trigger: AAAACTGCGGGGCTTCCACCAGGAGAGTGAGCTGGA...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTCCAGCTCACTCTCCTaGTGGAAGCCCCGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSSSSLS*WKPRSF
Trigger: AAAACTGCGGGGCTTCCACCAGGAGAGTGAGCTGGA...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTTCCTAGTTTCTCATTaGCGACCTTCTGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDFLVSH*RPSAVL
Trigger: CAAAACAGCAGAAGGTCGCCAATGAGAAACTAGGAA...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GAGCTAGGAGGGTATCTGTGGGTGGCTGTACAGGAAGCAAAATCGGCTTGTAGTTTCCTAGTTTCTCATTaGCGACCTTCTGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: ELGGYLWVAVQEAKSACSFLVSH*RPSAVL
Trigger: CAAAACAGCAGAAGGTCGCCAATGAGAAACTAGGAA...ACTACAAGCCGATTTTGCTTCCTGTACAGCCACCCACAGATACCCTCCTAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAATCGGGCCTAGGGCTTTaGTGCATAGCCTTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQSGLGL*CIALCS
Trigger: AGAACACAAGGCTATGCACCAAAGCCCTAGGCCCGA...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAATCTTGCAAAATAGGCTaGGACCGTGATATACTCCTG +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQESCKIG*DRDILL
Trigger: CAGGAGTATATCACGGTCCCAGCCTATTTTGCAAGA...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATCTCCATGGCAGGAAGTaGACAAAACTCAACAAAAGT +
Preference number: 4 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDLHGRK*TKLNKS
Trigger: ACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAG...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTGGGGCTGCTGGCTCTaGTTGGTTCCCTGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVWGCWL*LVPCPF
Trigger: AAAAGGACAGGGAACCAACCAGAGCCAGCAGCCCCA...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355636.10
ENST00000379073.9
CDS-3UTR CCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTTTGTGTTGGGGCTGCTaGCTCTGGTTGGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSLCWGC*LWLVPC
Trigger: ACAGGGAACCAACCAGAGCCAGCAGCCCCAACACAA...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355636.10
ENST00000379073.9
CDS-3UTR CCA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTATTGTGTTGGGGCTGCTaGCTCTGGTTGGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLLCWGC*LWLVPC
Trigger: ACAGGGAACCAACCAGAGCCAGCAGCCCCAACACAA...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355636.10
ENST00000379073.9
CDS-3UTR TCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAACATCGTGCAGATTCTTaGTGTCAAGTTGCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKHRADS*CQVAGL
Trigger: TAAGCCTGCAACTTGACATCAAGAATCTGCACGATG...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTCCTCCATGCAGAGCTaGTTGTCCTGCAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVSSMQS*LSCKVF
Trigger: GAAGACCTTGCAGGACAATCAGCTCTGCATGGAGGA...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTTGGAGTTGTCTCAGATaGCACTGTTTACTGGACCCA +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTWSCLR*HCLLDP
Trigger: TGGGTCCAGTAAACAGTGTCATCTGAGACAACTCCA...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TGCATCATAGGCTTCTTTGGTGATGGTAGTCTGGAGATAGTGCTTCTCCTTCTGATCCGTACCTTTGAATaGTCACCCTTGTTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: CIIGFFGDGSLEIVLLLLIRTFE*SPLFSG
Trigger: GCCTGAGAACAAGGGTGATCATTCAAAGGTACGGAT...CAGAAGGAGAAGCACTATCTCCAGACTACCATCACCAAAGAAGCCTATGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR TCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGATCCGTACCTTTGAATaGTCACCCTTGTTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWIRTFE*SPLFSG
Trigger: GCCTGAGAACAAGGGTGATCATTCAAAGGTACGGAT...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAATGAGATCATCCTGTTaGGAGACCTTTTGCCAGACT +
Preference number: 4 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKMRSSC*ETFCQT
Trigger: AGTCTGGCAAAAGGTCTCTCAACAGGATGATCTCAT...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGGGCACTGCAGGATGGTaGTGTCCTTATCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVGTAGW*CPYPSS
Trigger: AGAGGAAGGATAAGGACATCACCATCCTGCAGTGCC...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp CTTTTTCATCCTTTCCTCATAAGCAATGATTTCCTCTTCCAGCTGAGCTTTCTTGCTTTTGGGTCTCGGTaGACTCCAGCTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LFHPFLISNDFLFQLSFLAFGSR*TPAAAP
Trigger: AGGAGCTGCAGCTGGAGTTCACCGAGACCCAAAAGC...AAGAAAGCTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAAGGATGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR TCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCTTCTAACTTGCATTTaGTGGAGCCTTGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWLLTCI*WSLAPC
Trigger: ACAGGGAGCAAGGCTCCATCAAATGCAAGTTAGAAG...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAATTTCCTCATAAGCAATaGTTTCCTCTTCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQEFPHKQ*FPLPAE
Trigger: CTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAA...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCAGTGAGGTCCATTCTTTaGCCCATATCCTGGGGCAAC +
Preference number: 4 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPVRSIL*PISWGN
Trigger: GTTGCCCCAGGATATGGGTCAAAGAATGGACCTCAC...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAATCCCGATGTACTTGGTaGGGTCCATTCTTTGACCCA +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQSRCTW*GPFFDP
Trigger: TGGGTCAAAGAATGGACCTCACCAAGTACATCGGGA...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGGAACTCACTGTCCTCTaGAGAAACACCCGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWELTVL*RNTRGN
Trigger: ATTTCCACGGGTGTTTCTTCAGAGGACAGTGAGTTC...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TGCATCATAGGCTTCTTTGGTGATGGTAGTCTGGAGATAGTGCTTCTCCTTCTGGAACTCACTGTCCTCTaGAGAAACACCCGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: CIIGFFGDGSLEIVLLLLELTVL*RNTRGN
Trigger: ATTTCCACGGGTGTTTCTTCAGAGGACAGTGAGTTC...CAGAAGGAGAAGCACTATCTCCAGACTACCATCACCAAAGAAGCCTATGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGAATAGGCTGGGACCGTaGTATACTCCTGTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWNRLGP*YTPVRA
Trigger: AGCTCTTACAGGAGTATATCACGGTCCCAGCCTATT...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TGCATCATAGGCTTCTTTGGTGATGGTAGTCTGGAGATAGTGCTTCTCCTTCTGAATAGGCTGGGACCGTaGTATACTCCTGTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: CIIGFFGDGSLEIVLLLLNRLGP*YTPVRA
Trigger: AGCTCTTACAGGAGTATATCACGGTCCCAGCCTATT...CAGAAGGAGAAGCACTATCTCCAGACTACCATCACCAAAGAAGCCTATGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGCTCTTGCAGACATCGTaGAGATTCTTGATGTCAAGT +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVLLQTS*RFLMSS
Trigger: ACTTGACATCAAGAATCTGCACGATGTCTGCAAGAG...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp AGGGAGGAAATGAGAGTTTTGATTCGAGGAGAAATTAACGAGGTGATTCCTCAAGTGGCTGCTGTTCATTaGCTCCTCCATGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: REEMRVLIRGEINEVIPQVAAVH*LLHAEL
Trigger: CAGCTCTGCATGGAGGAGGCAATGAACAGCAGCCAC...TTGAGGAATCACCTCGTTAATTTCTCCTCGAATCAAAACTCTCATTTCCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR GCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGGCTTCTTGTCGTGGCTaGTGTTCATTGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVASCRG*CSLPPP
Trigger: TGGAGGAGGCAATGAACAGCAGCCACGACAAGAAGC...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR GCA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAGCTAATGCCTGTGCTTaGTTCTTGTCGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLANACA*FLSWLL
Trigger: CAGCAGCCACGACAAGAAGCAAGCACAGGCATTAGC...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR GCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAGAACCAAAGCGTTACTaGAGGCCAGCTTATTTCGAA +
Preference number: 4 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKEPKRY*RPAYFE
Trigger: TTCGAAATAAGCTGGCCTGCAGTAACGCTTTGGTTC...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCTTCTGCTCCTGCAAGTaGTTCAGTATCTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: PLKKHPWKCCSGLDVDSSFCSCK*FSIFLM
Trigger: CATCAAAAAGATACTGAAGCACTTGCAGGAGCAGAA...GCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CTTTTTCATCCTTTCCTCATAAGCAATGATTTCCTCTTCCAGCTGAGCTTTCTTGTGGCCATGCACTGCTaGTTCTCCAGCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LFHPFLISNDFLFQLSFLVAMHC*FSSSFS
Trigger: GGAGAAGGAGCTGGAGAAGCAGCAGTGCATGGCCAC...AAGAAAGCTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAAGGATGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR GCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTCAAGTTCTGTGGCCATaGACTGCTGCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSQVLWP*TAASPA
Trigger: AGCTGGAGAAGCAGCAGTGCATGGCCACAGAACTTG...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTCAAGTTCTGTGGCCATaGACTGCTGCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSQVLWP*TAASPA
Trigger: AGCTGGAGAAGCAGCAGTGCATGGCCACAGAACTTG...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp AGGGAGGAAATGAGAGTTTTGATTCGAGGAGAAATTAACGAGGTGATTCCTCAAGTGCAGCCTCTTCTTTaGACTGGGCTGCTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: REEMRVLIRGEINEVIPQVQPLL*TGLLAE
Trigger: CTCAGCAAGCAGCCCAGTGCAAAGAAGAGGCTGCAC...TTGAGGAATCACCTCGTTAATTTCTCCTCGAATCAAAACTCTCATTTCCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR GCA 90 bp TGTGCTCATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGTGCTCCCTGTGCTGGTaGTTGATACGATCAAGCATG +
Preference number: 4 (lower is better)
Translates to: CAHAHVFISEFGPGDGSMCSLCW*LIRSSM
Trigger: CATGCTTGATCGTATCAAGCACCAGCACAGGGAGCA...CATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATGAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR GCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTGAGCCTTGCTCCCTGTaGTGGTGCTTGATACGATCA +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSEPCSL*WCLIRS
Trigger: TGATCGTATCAAGCACCAGCACAGGGAGCAAGGCTC...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCGAGCCTTGCTCCCTGTaGTGGTGCTTGATACGATCA +
Preference number: 4 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVEPCSL*WCLIRS
Trigger: TGATCGTATCAAGCACCAGCACAGGGAGCAAGGCTC...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTACATTTGATGGAGCCTTaGTCCCTGTGCTGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLHLMEP*SLCWCL
Trigger: CAAGCACCAGCACAGGGAGCAAGGCTCCATCAAATG...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTTTGCTCTTCTTCAACTaGTCCCGTTTGTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTLLFFN*SRLSSR
Trigger: TCTGGAGGACAAACGGGAGCAGTTGAAGAAGAGCAA...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGGTCTGTGTCAAGCTTTaGTGCAGGCTCTTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWVCVKL*CRLFVS
Trigger: AGAGACAAAGAGCCTGCAGCAAAGCTTGACACAGAC...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp AAAGCCCAAATAGCTTGGGGCTCCACCAGATATGAGATGAGACCTTCCACATATGTCTGTGTCAAGCTTTaGTGCAGGCTCTTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: KAQIAWGSTRYEMRPSTYVCVKL*CRLFVS
Trigger: AGAGACAAAGAGCCTGCAGCAAAGCTTGACACAGAC...ATATGTGGAAGGTCTCATCTCATATCTGGTGGAGCCCCAAGCTATTTGGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR GCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTAGGTCATTCTGGTGTTaGTTCTGCCACTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSRSFWC*FCHCST
Trigger: GGTGCTGCAGTGGCAGAAGCAACACCAGAATGACCT...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCAAGGTCATTCTGGTGTTaGTTCTGCCACTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPRSFWC*FCHCST
Trigger: GGTGCTGCAGTGGCAGAAGCAACACCAGAATGACCT...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGTGCTGTTTTGCCCATTaGTCCAAGTTGGTCATAATC +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQCCFAH*SKLVII
Trigger: GATTATGACCAACTTGGAGCAATGGGCAAAACAGCA...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGGACCTTCTGCTGTTTTaGCCATTGCTCCAAGTTGGT +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWDLLLF*PLLQVG
Trigger: ACCAACTTGGAGCAATGGGCAAAACAGCAGAAGGTC...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTGCAATGTATTTCACCTaGTCTCGGAGCTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTAMYFT*SRSWFP
Trigger: AGGAAACCAGCTCCGAGAGCAGGTGAAATACATTGC...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTCACCCGTGGAAATGCTaGTCAGGGCTAGATGTGGAT +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSHPWKC*SGLDVD
Trigger: ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTG...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCCACCCGTGGAAATGCTaGTCAGGGCTAGATGTGGAT +
Preference number: 4 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVHPWKC*SGLDVD
Trigger: ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTG...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TGTGCTCATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGAAACACCCGTGGAAATaGTGCTCAGGGCTAGATGTG +
Preference number: 4 (lower is better)
Translates to: CAHAHVFISEFGPGDGSMKHPWK*CSGLDV
Trigger: CACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTT...CATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATGAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR CCA 90 bp CCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCTGCAACATCTTCACTTaGCATTCTAGTAACTCGATG +
Preference number: 4 (lower is better)
Translates to: PLKKHPWKCCSGLDVDSSCNIFT*HSSNSM
Trigger: CATCGAGTTACTAGAATGCCAAGTGAAGATGTTGCA...GCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTATCCTTCACCAGGTTCTaGTACTCCTCCACATGCAGG +
Preference number: 4 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLSFTRF*YSSTCR
Trigger: CCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGGA...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTCCTTCACCAGGTTCTaGTACTCCTCCACATGCAGG +
Preference number: 4 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVSFTRF*YSSTCR
Trigger: CCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGGA...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CCATTGCTCCAAGTTGGTCATAATCTGATCATTCCCTCGGTAGAGCCTACAGGTTCATTTCAAGTTCTGTaGCCATGCACTGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PLLQVGHNLIIPSVEPTGSFQVL*PCTAAS
Trigger: AGAAGCAGCAGTGCATGGCCACAGAACTTGAAATGA...ACCTGTAGGCTCTACCGAGGGAATGATCAGATTATGACCAACTTGGAGCAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTCCTTGCTCCCTGTGCTaGTGCTTGATACGATCAAGC +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSPCSLC*CLIRSS
Trigger: GCTTGATCGTATCAAGCACCAGCACAGGGAGCAAGG...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCCCTTGCTCCCTGTGCTaGTGCTTGATACGATCAAGC +
Preference number: 4 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVPCSLC*CLIRSS
Trigger: GCTTGATCGTATCAAGCACCAGCACAGGGAGCAAGG...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GAAATGAGAGTTTTGATTCGAGGAGAAATTAACGAGGTGATTCCTCAAGGGCTGAGAGCTTTGTCCAGCTaGGCCTGCAGGCTCATTAAG +
Preference number: 4 (lower is better)
Translates to: EMRVLIRGEINEVIPQGLRALSS*ACRLIK
Trigger: CTTAATGAGCCTGCAGGCCCAGCTGGACAAAGCTCT...CAGCCCTTGAGGAATCACCTCGTTAATTTCTCCTCGAATCAAAACTCTCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGAGCTCACTCTCCTGGTaGAAGCCCCGCAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVSSLSW*KPRSFL
Trigger: AAGAAAACTGCGGGGCTTCCACCAGGAGAGTGAGCT...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCAAGCTCACTCTCCTGGTaGAAGCCCCGCAGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPSSLSW*KPRSFL
Trigger: AAGAAAACTGCGGGGCTTCCACCAGGAGAGTGAGCT...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGATCTTGAGGTCATTCTaGTGTTGCTTCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWILRSF*CCFCHC
Trigger: GCAGTGGCAGAAGCAACACCAGAATGACCTCAAGAT...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TGCATCATAGGCTTCTTTGGTGATGGTAGTCTGGAGATAGTGCTTCTCCTTCTGATCTTGAGGTCATTCTaGTGTTGCTTCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: CIIGFFGDGSLEIVLLLLILRSF*CCFCHC
Trigger: GCAGTGGCAGAAGCAACACCAGAATGACCTCAAGAT...CAGAAGGAGAAGCACTATCTCCAGACTACCATCACCAAAGAAGCCTATGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTATCTTGAGGTCATTCTaGTGTTGCTTCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTILRSF*CCFCHC
Trigger: GCAGTGGCAGAAGCAACACCAGAATGACCTCAAGAT...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGACCTGCTCTCGGAGCTaGTTTCCTAGTTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWTCSRS*FPSFSL
Trigger: CAATGAGAAACTAGGAAACCAGCTCCGAGAGCAGGT...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATCGGGCCTAGGGCTTTaGTGCATAGCCTTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPSGLGL*CIALCS
Trigger: AGAACACAAGGCTATGCACCAAAGCCCTAGGCCCGA...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTTCAGGGCAATGAGGTaGCTGCTGTTCATTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVFRAMR*LLFIAS
Trigger: GGAGGCAATGAACAGCAGCCACCTCATTGCCCTGAA...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355636.10
ENST00000379073.9
CDS-3UTR CCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTGGACCATTACACTGTaGAGGTGGCTGTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVWTITL*RWLWEG
Trigger: TCCTTCCCACAGCCACCTCCACAGTGTAATGGTCCA...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355636.10
ENST00000379073.9
CDS-3UTR CCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTACCCCCAAGTCTCAGTaGCTTACGACCGTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSTPKSQ*LTTVKV
Trigger: AACCTTCACGGTCGTAAGCCACTGAGACTTGGGGGT...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGATGAGATCATCCTGTTaGGAGACCTTTTGCCAGACT +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWMRSSC*ETFCQT
Trigger: AGTCTGGCAAAAGGTCTCTCAACAGGATGATCTCAT...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGTTCGAAGTTCTTGAATaGGATCATCCTGTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQFEVLE*DHPVER
Trigger: TCTCTCAACAGGATGATCTCATTCAAGAACTTCGAA...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGCTTCAGTATCTTTTTaGTGTCTTCACACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQASVSF*CLHTLL
Trigger: CAGAAGAGTGTGAAGACATCAAAAAGATACTGAAGC...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TGTGCTCATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGTTCAGGAGGCTGTTCTaGACCTGTGTCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: CAHAHVFISEFGPGDGSMFRRLF*TCVSFF
Trigger: GAAGAAACTGACACAGGTTCAGAACAGCCTCCTGAA...CATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATGAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR TCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTCCCTGTGCTGGTGCTTaGTACGATCAAGCATGTCAT +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSPCAGA*YDQACH
Trigger: ATGACATGCTTGATCGTATCAAGCACCAGCACAGGG...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACTTCTAACTTGCATTTaGTGGAGCCTTGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQLLTCI*WSLAPC
Trigger: ACAGGGAGCAAGGCTCCATCAAATGCAAGTTAGAAG...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGTATTCAAGTCTTGGATaGCTTGCTGGCTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWYSSLG*LAGWCC
Trigger: ACAACACCAGCCAGCAAGTCATCCAAGACTTGAATA...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAATTAAGGACTCCTTCTaGAGGGCTATCTCTTTATTC +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQEIKDSF*RAISLF
Trigger: GAATAAAGAGATAGCCCTTCAGAAGGAGTCCTTAAT...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTCAGGCTCTTTGTCTCTaGGGTCACGTGATTGAGCTT +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSQALCL*GHVIEL
Trigger: AAGCTCAATCACGTGACCTCAGAGACAAAGAGCCTG...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAAGAACTCACTGTCCTCTaGAGAAACACCCGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQELTVL*RNTRGN
Trigger: ATTTCCACGGGTGTTTCTTCAGAGGACAGTGAGTTC...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAAAATAGGCTGGGACCGTaGTATACTCCTGTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQNRLGP*YTPVRA
Trigger: AGCTCTTACAGGAGTATATCACGGTCCCAGCCTATT...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGATATTTTCAGGGCAATaGGGTGGCTGCTGTTCATTG +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWIFSGQ*GGCCSL
Trigger: CAATGAACAGCAGCCACCTCATTGCCCTGAAAATAT...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355636.10
ENST00000379073.9
CDS-3UTR GCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTCATTGCCTCCTCCATaGAGAGCTGATTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSSLPPP*RADCPA
Trigger: TGCAGGACAATCAGCTCTGCATGGAGGAGGCAATGA...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGATGCTCTTGAATCATaGAAGGAGAAGTGTATATCC +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQDALES*KEKCIS
Trigger: GGATATACACTTCTCCTTGCATGATTCAAGAGCATC...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGAAGACTTGATGCCAAAGCCCAAATAGCTTGGGGCTCCACCAGATATGAGATGGATGCTCTTGAATCATaGAAGGAGAAGTGTATATCC +
Preference number: 4 (lower is better)
Translates to: GRLDAKAQIAWGSTRYEMDALES*KEKCIS
Trigger: GGATATACACTTCTCCTTGCATGATTCAAGAGCATC...CATCTCATATCTGGTGGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR GCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGCACTGGCTGTCTTTCTaGTCCTGCAAGTGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVHWLSF*SCKCFS
Trigger: ACTGAAGCACTTGCAGGAGCAGAAAGACAGCCAGTG...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CTTTTTCATCCTTTCCTCATAAGCAATGATTTCCTCTTCCAGCTGAGCTTTCTTGTGACAGCCTGCCAGTaGAGCCTCTTCTTTGCACTG +
Preference number: 4 (lower is better)
Translates to: LFHPFLISNDFLFQLSFLVTACQ*SLFFAL
Trigger: CAGTGCAAAGAAGAGGCTGCACTGGCAGGCTGTCAC...AAGAAAGCTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAAGGATGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR GCA 90 bp CTTTTTCATCCTTTCCTCATAAGCAATGATTTCCTCTTCCAGCTGAGCTTTCTTCTCCAGGTGACAGCCTaGCAGTGCAGCCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LFHPFLISNDFLFQLSFLLQVTA*QCSLFF
Trigger: AAAGAAGAGGCTGCACTGGCAGGCTGTCACCTGGAG...AAGAAAGCTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAAGGATGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR GCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTGCTCCCTGTGCTGGTaGTTGATACGATCAAGCATG +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVCSLCW*LIRSSM
Trigger: CATGCTTGATCGTATCAAGCACCAGCACAGGGAGCA...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAAAGTCTTGGATGACTTaGTGGCTGGTGTTGTATTTG +
Preference number: 4 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKKSWMT*WLVLYL
Trigger: CAAATACAACACCAGCCAGCAAGTCATCCAAGACTT...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAATGTGTCAAGCTTTGCTaGAGGCTCTTTGTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQCVKLC*RLFVSE
Trigger: CTCAGAGACAAAGAGCCTGCAGCAAAGCTTGACACA...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATCATTGGCGACCTTCTaGTGTTTTGCCCATTGCTCC +
Preference number: 4 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPSLATF*CFAHCS
Trigger: GGAGCAATGGGCAAAACAGCAGAAGGTCGCCAATGA...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTTCATTGGCGACCTTCTaGTGTTTTGCCCATTGCTCC +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSSLATF*CFAHCS
Trigger: GGAGCAATGGGCAAAACAGCAGAAGGTCGCCAATGA...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAAGCAATGTATTTCACCTaGTCTCGGAGCTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQAMYFT*SRSWFP
Trigger: AGGAAACCAGCTCCGAGAGCAGGTGAAATACATTGC...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAACACCCGTGGAAATaGTGCTCAGGGCTAGATGTG +
Preference number: 4 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLKHPWK*CSGLDV
Trigger: CACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTT...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAATGCAACATCTTCACTTaGCATTCTAGTAACTCGATG +
Preference number: 4 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQECNIFT*HSSNSM
Trigger: CATCGAGTTACTAGAATGCCAAGTGAAGATGTTGCA...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTTCATTTCAAGTTCTGTaGCCATGCACTGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTSFQVL*PCTAAS
Trigger: AGAAGCAGCAGTGCATGGCCACAGAACTTGAAATGA...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACCACCCGTTTTCTGTTaGAGGTTTGTTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQPPVFC*RFVPSQ
Trigger: CTGAGAAGGAACAAACCTCCAACAGAAAACGGGTGG...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGCTTCCTCCAACTTTCTaGAATTCTCTTTCAACGTCT +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQLPPTF*NSLSTS
Trigger: AGACGTTGAAAGAGAATTCCAGAAAGTTGGAGGAAG...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTCTTCCTCCAACTTTCTaGAATTCTCTTTCAACGTCT +
Preference number: 4 (lower is better)
Translates to: LKKHPWKCCSGLDVDSSSLPPTF*NSLSTS
Trigger: AGACGTTGAAAGAGAATTCCAGAAAGTTGGAGGAAG...ACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGCTTCCTCCAACTTTCTaGAATTCTCTTTCAACGTCT +
Preference number: 4 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVLPPTF*NSLSTS
Trigger: AGACGTTGAAAGAGAATTCCAGAAAGTTGGAGGAAG...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAATTCCTAGTTTCTCATTaGCGACCTTCTGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKFLVSH*RPSAVL
Trigger: CAAAACAGCAGAAGGTCGCCAATGAGAAACTAGGAA...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAAACCTGCTCTCGGAGCTaGTTTCCTAGTTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQTCSRS*FPSFSL
Trigger: CAATGAGAAACTAGGAAACCAGCTCCGAGAGCAGGT...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTGGACCATTACACTGTaGAGGTGGTCCTTTTCGCCA +
Preference number: 4 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVWTITL*RWSFSP
Trigger: TGGCGAAAAGGACCACCTCCACAGTGTAATGGTCCA...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR CCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTGGACCATTACACTGTaGAGGTGGTCCTTTTCGCCA +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSWTITL*RWSFSP
Trigger: TGGCGAAAAGGACCACCTCCACAGTGTAATGGTCCA...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR CCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGCTGAAGAAACACCCGTaGAAATGCTGCTCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVLKKHP*KCCSGL
Trigger: TAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAG...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
3UTR CAA 72 bp CTTGAATCATGCAAGGAGAAGTGTATATCCGTACCTTaGAATGATCACCCTTGTTCTCAGGCTCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: LESCKEKCISVP*NDHPCSQAPDP
Trigger: TGGGTCAGGAGCCTGAGAACAAGGGTGATCATTCAAAGGTACGGATATACACTTCTCCTTGCATGATTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGAGTTGTCTCAGATaGCACTGTTTACTGGACCCA +
Preference number: 4 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPWSCLR*HCLLDP
Trigger: TGGGTCCAGTAAACAGTGTCATCTGAGACAACTCCA...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTGGAGTTGTCTCAGATaGCACTGTTTACTGGACCCA +
Preference number: 4 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVWSCLR*HCLLDP
Trigger: TGGGTCCAGTAAACAGTGTCATCTGAGACAACTCCA...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTTCAGTTTGCAGTaGTGGTGCAGAAGAACCAGG +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVSFSLQ*WCRRTR
Trigger: CCTGGTTCTTCTGCACCATCACTGCAAACTGAAAGA...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTATCTTTCAGTTTGCAGTaGTGGTGCAGAAGAACCAGG +
Preference number: 4 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLSFSLQ*WCRRTR
Trigger: CCTGGTTCTTCTGCACCATCACTGCAAACTGAAAGA...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCCCTGTGTTCTCGTTGTaGTTTCCCATTTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVPVFSL*FPISSS
Trigger: TGAGGAGGAAATGGGAAATCACAACGAGAACACAGG...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTGTATATCCGTACCTTTaGATGATCACCCTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTVYPYL*MITLVL
Trigger: GAGAACAAGGGTGATCATTCAAAGGTACGGATATAC...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTCAGGAGGCTGTTCTaGACCTGTGTCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVFRRLF*TCVSFF
Trigger: GAAGAAACTGACACAGGTTCAGAACAGCCTCCTGAA...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTACTTCTAACTTGCATTTaGTGGAGCCTTGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLLLTCI*WSLAPC
Trigger: ACAGGGAGCAAGGCTCCATCAAATGCAAGTTAGAAG...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAAAGCTTTGTGGCCTCCTaGAGATCTTCTTCTAACTTG +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQSFVAS*RSSSNL
Trigger: CAAGTTAGAAGAAGATCTTCAGGAGGCCACAAAGCT...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TGCATCATAGGCTTCTTTGGTGATGGTAGTCTGGAGATAGTGCTTCTCCTTCTGTTTCCTCATAAGCAATaGTTTCCTCTTCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: CIIGFFGDGSLEIVLLLLFPHKQ*FPLPAE
Trigger: CTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAA...CAGAAGGAGAAGCACTATCTCCAGACTACCATCACCAAAGAAGCCTATGATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR TCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTAATAGGCTGGGACCGTaGTATACTCCTGTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSNRLGP*YTPVRA
Trigger: AGCTCTTACAGGAGTATATCACGGTCCCAGCCTATT...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTGGGGACAGGCTAGGTaGTGGTGTAGTAACAAACAA +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSWGQAR*WCSNKQ
Trigger: TTGTTTGTTACTACACCATCACCTAGCCTGTCCCCA...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp TCTGAGTCTCCTGATGCTCTTGAATCATGCAAGGAGAAGTGTATATCCGTACCTTCTTCCTCTGTCTCTTaGAGACATCGTGCAGATTCT +
Preference number: 4 (lower is better)
Translates to: SESPDALESCKEKCISVPSSSVS*RHRADS
Trigger: AGAATCTGCACGATGTCTGCAAGAGACAGAGGAAGA...AGGTACGGATATACACTTCTCCTTGCATGATTCAAGAGCATCAGGAGACTCAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAATTCTGCTCCTGCAAGTaGTTCAGTATCTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKFCSCK*FSIFLM
Trigger: CATCAAAAAGATACTGAAGCACTTGCAGGAGCAGAA...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CTTTTTCATCCTTTCCTCATAAGCAATGATTTCCTCTTCCAGCTGAGCTTTCTTCAAGTTCTGTGGCCATaGACTGCTGCTTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LFHPFLISNDFLFQLSFLQVLWP*TAASPA
Trigger: AGCTGGAGAAGCAGCAGTGCATGGCCACAGAACTTG...AAGAAAGCTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAAGGATGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR GCA 90 bp TATTCTGGTCTAAAATGTAACATTGGAAGACTTGATGCCAAAGCCCAAATAGCTGTGCAGCCTCTTCTTTaGACTGGGCTGCTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: YSGLKCNIGRLDAKAQIAVQPLL*TGLLAE
Trigger: CTCAGCAAGCAGCCCAGTGCAAAGAAGAGGCTGCAC...AGCTATTTGGGCTTTGGCATCAAGTCTTCCAATGTTACATTTTAGACCAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR GCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTTTGCTCTTCTTCAACTaGTCCCGTTTGTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSLLFFN*SRLSSR
Trigger: TCTGGAGGACAAACGGGAGCAGTTGAAGAAGAGCAA...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGAAGTCTTGGATGACTTaGTGGCTGGTGTTGTATTTG +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWKSWMT*WLVLYL
Trigger: CAAATACAACACCAGCCAGCAAGTCATCCAAGACTT...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGTGTCAAGCTTTGCTaGAGGCTCTTTGTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPCVKLC*RLFVSE
Trigger: CTCAGAGACAAAGAGCCTGCAGCAAAGCTTGACACA...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTGTGTCAAGCTTTaGTGCAGGCTCTTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSVCVKL*CRLFVS
Trigger: AGAGACAAAGAGCCTGCAGCAAAGCTTGACACAGAC...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCGAGGGTATCTGTGGGTaGCTGTACAGGAAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVEGICG*LYRKQN
Trigger: ATTTTGCTTCCTGTACAGCCACCCACAGATACCCTC...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTTTCAAAGTGAGCTTTTaGGTCTCGGTGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSFKVSF*VSVNSS
Trigger: GCTGGAGTTCACCGAGACCCAAAAGCTCACTTTGAA...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTACCACCCGTTTTCTGTTaGAGGTTTGTTCCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLPPVFC*RFVPSQ
Trigger: CTGAGAAGGAACAAACCTCCAACAGAAAACGGGTGG...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp AAAGCCCAAATAGCTTGGGGCTCCACCAGATATGAGATGAGACCTTCCACATATTCTTGGATGACTTGCTaGCTGGTGTTGTATTTGTTG +
Preference number: 4 (lower is better)
Translates to: KAQIAWGSTRYEMRPSTYSWMTC*LVLYLL
Trigger: CAACAAATACAACACCAGCCAGCAAGTCATCCAAGA...ATATGTGGAAGGTCTCATCTCATATCTGGTGGAGCCCCAAGCTATTTGGGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CCA 90 bp TATTCTGGTCTAAAATGTAACATTGGAAGACTTGATGCCAAAGCCCAAATAGCTTCCAGCTCACTCTCCTaGTGGAAGCCCCGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: YSGLKCNIGRLDAKAQIASSSLS*WKPRSF
Trigger: AAAACTGCGGGGCTTCCACCAGGAGAGTGAGCTGGA...AGCTATTTGGGCTTTGGCATCAAGTCTTCCAATGTTACATTTTAGACCAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTATCTTGAGGTCATTCTaGTGTTGCTTCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSILRSF*CCFCHC
Trigger: GCAGTGGCAGAAGCAACACCAGAATGACCTCAAGAT...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAATTTCGCCACTCAGCTTaGCAATGTATTTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQFRHSA*QCISPA
Trigger: AGCAGGTGAAATACATTGCCAAGCTGAGTGGCGAAA...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTTTTCCTGCTGCAAGTaGACCATTACACTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVFSCCK*TITLWR
Trigger: CCTCCACAGTGTAATGGTCCACTTGCAGCAGGAAAA...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTATTTTCCTGCTGCAAGTaGACCATTACACTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLFSCCK*TITLWR
Trigger: CCTCCACAGTGTAATGGTCCACTTGCAGCAGGAAAA...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TGTGCTCATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGCTAAAGCTCACTCCATaGCAGGAAGTGGACAAAACT +
Preference number: 4 (lower is better)
Translates to: CAHAHVFISEFGPGDGSMLKLTP*QEVDKT
Trigger: AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG...CATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATGAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
3UTR CAA 72 bp GACTTCAGACAGTCGTTTCTGAGTCTCCTGATGCTCTaGAATCATGCAAGGAGAAGTGTATATCCGTACCTT +
Preference number: 4 (lower is better)
Translates to: DFRQSFLSLLML*NHARRSVYPYL
Trigger: AAGGTACGGATATACACTTCTCCTTGCATGATTCAAGAGCATCAGGAGACTCAGAAACGACTGTCTGAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CAA 72 bp GGACTCCTTCTGAAGGGCTATCTCTTTATTCAAGTCTaGGATGACTTGCTGGCTGGTGTTGTATTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: GLLLKGYLFIQV*DDLLAGVVFVE
Trigger: CTCAACAAATACAACACCAGCCAGCAAGTCATCCAAGACTTGAATAAAGAGATAGCCCTTCAGAAGGAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTCATCGTGCAGATTCTTaGTGTCAAGTTGCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSHRADS*CQVAGL
Trigger: TAAGCCTGCAACTTGACATCAAGAATCTGCACGATG...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTTTCGAAGTTCTTGAATaGGATCATCCTGTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTFEVLE*DHPVER
Trigger: TCTCTCAACAGGATGATCTCATTCAAGAACTTCGAA...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TGCATCATAGGCTTCTTTGGTGATGGTAGTCTGGAGATAGTGCTTCTCCTTCTGTTCGAAGTTCTTGAATaGGATCATCCTGTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: CIIGFFGDGSLEIVLLLLFEVLE*DHPVER
Trigger: TCTCTCAACAGGATGATCTCATTCAAGAACTTCGAA...CAGAAGGAGAAGCACTATCTCCAGACTACCATCACCAAAGAAGCCTATGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR TCA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATATTCAAGTCTTGGATaGCTTGCTGGCTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPYSSLG*LAGWCC
Trigger: ACAACACCAGCCAGCAAGTCATCCAAGACTTGAATA...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGATTAAGGACTCCTTCTaGAGGGCTATCTCTTTATTC +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWIKDSF*RAISLF
Trigger: GAATAAAGAGATAGCCCTTCAGAAGGAGTCCTTAAT...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TGTGCTCATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGTTTCCTCATAAGCAATaGTTTCCTCTTCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: CAHAHVFISEFGPGDGSMFPHKQ*FPLPAE
Trigger: CTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAA...CATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATGAGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR TCA 90 bp TGTGCTCATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGCTAAGAAAATGACTTaGGGCCACAAAAGGCCTATT +
Preference number: 4 (lower is better)
Translates to: CAHAHVFISEFGPGDGSMAKKMT*GHKRPI
Trigger: AATAGGCCTTTTGTGGCCTCAAGTCATTTTCTTAGC...CATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATGAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR TCA 90 bp TATTCTGGTCTAAAATGTAACATTGGAAGACTTGATGCCAAAGCCCAAATAGCTGGATCCGCAGTTGGCTaGGCAGTTAGCTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: YSGLKCNIGRLDAKAQIAGSAVG*AVSCIS
Trigger: AGAAATGCAGCTAACTGCTCAGCCAACTGCGGATCC...AGCTATTTGGGCTTTGGCATCAAGTCTTCCAATGTTACATTTTAGACCAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR TCA 90 bp CTTTTTCATCCTTTCCTCATAAGCAATGATTTCCTCTTCCAGCTGAGCTTTCTTGGGCTCCACCAGATATaGGATGAGACCTTCCACATA +
Preference number: 4 (lower is better)
Translates to: LFHPFLISNDFLFQLSFLGLHQI*DETFHI
Trigger: TATGTGGAAGGTCTCATCTCATATCTGGTGGAGCCC...AAGAAAGCTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAAGGATGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR GCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACTCTTGCAGACATCGTaGAGATTCTTGATGTCAAGT +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQLLQTS*RFLMSS
Trigger: ACTTGACATCAAGAATCTGCACGATGTCTGCAAGAG...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTCTTCCTCTGTCTCTTaGAGACATCGTGCAGATTCT +
Preference number: 4 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVSSSVS*RHRADS
Trigger: AGAATCTGCACGATGTCTGCAAGAGACAGAGGAAGA...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCATCTTCTTTCAGTTTaGAGTGATGGTGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTHLLSV*SDGAEE
Trigger: TTCTTCTGCACCATCACTGCAAACTGAAAGAAGATG...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACTAGTAACTCGATGTTaGTCAGGGAAGACTGGTATT +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQLVTRC*SGKTGI
Trigger: AATACCAGTCTTCCCTGAGCAACATCGAGTTACTAG...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGAACCAAAGCGTTACTaGAGGCCAGCTTATTTCGAA +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSEPKRY*RPAYFE
Trigger: TTCGAAATAAGCTGGCCTGCAGTAACGCTTTGGTTC...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TCCCTTTACAGATGTGAAAACAACGATCTTTGGTCCAAAGTCGCTAAGAAAATGTCCTTGGACTTGTCCTaGTTAGCCTCCTTGACTGTC +
Preference number: 4 (lower is better)
Translates to: SLYRCENNDLWSKVAKKMSLDLS*LASLTV
Trigger: GACAGTCAAGGAGGCTAAGCAGGACAAGTCCAAGGA...CATTTTCTTAGCGACTTTGGACCAAAGATCGTTGTTTTCACATCTGTAAAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR GCA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGTTCTTTTTAAATTCCTaGCGCAAAGCTTCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQFFLNS*RKASSS
Trigger: AGAACTTGAAGCTTTGCGGCAGGAATTTAAAAAGAA...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGTGCAACATCTTCACTTaGCATTCTAGTAACTCGATG +
Preference number: 4 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWCNIFT*HSSNSM
Trigger: CATCGAGTTACTAGAATGCCAAGTGAAGATGTTGCA...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTCATTTCAAGTTCTGTaGCCATGCACTGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSSFQVL*PCTAAS
Trigger: AGAAGCAGCAGTGCATGGCCACAGAACTTGAAATGA...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TGTGCTCATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGTCTTGGATGACTTGCTaGCTGGTGTTGTATTTGTTG +
Preference number: 4 (lower is better)
Translates to: CAHAHVFISEFGPGDGSMSWMTC*LVLYLL
Trigger: CAACAAATACAACACCAGCCAGCAAGTCATCCAAGA...CATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATGAGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR CCA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTATTTCGCCACTCAGCTTaGCAATGTATTTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLFRHSA*QCISPA
Trigger: AGCAGGTGAAATACATTGCCAAGCTGAGTGGCGAAA...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTTCTTGCAAAATAGGCTaGGACCGTGATATACTCCTG +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSSCKIG*DRDILL
Trigger: CAGGAGTATATCACGGTCCCAGCCTATTTTGCAAGA...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTCTAAAGCTCACTCCATaGCAGGAAGTGGACAAAACT +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSLKLTP*QEVDKT
Trigger: AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGCTAAAGCTCACTCCATaGCAGGAAGTGGACAAAACT +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVLKLTP*QEVDKT
Trigger: AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
3UTR CAA 72 bp AAGTCTTGGATGACTTGCTGGCTGGTGTTGTATTTGTaGAGAGAGGATTCCAGTTGTGTAGAACAACACTGT +
Preference number: 4 (lower is better)
Translates to: KSWMTCWLVLYL*REDSSCVEQHC
Trigger: ACAGTGTTGTTCTACACAACTGGAATCCTCTCTCAACAAATACAACACCAGCCAGCAAGTCATCCAAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
3UTR CAA 72 bp TTCAAGTCTTGGATGACTTGCTGGCTGGTGTTGTATTaGTTGAGAGAGGATTCCAGTTGTGTAGAACAACAC +
Preference number: 4 (lower is better)
Translates to: FKSWMTCWLVLY*LREDSSCVEQH
Trigger: GTGTTGTTCTACACAACTGGAATCCTCTCTCAACAAATACAACACCAGCCAGCAAGTCATCCAAGACTTGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTATATCCGTACCTTTaGATGATCACCCTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSVYPYL*MITLVL
Trigger: GAGAACAAGGGTGATCATTCAAAGGTACGGATATAC...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCAGTATATCCGTACCTTTaGATGATCACCCTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPVYPYL*MITLVL
Trigger: GAGAACAAGGGTGATCATTCAAAGGTACGGATATAC...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTCCTCTTTTCCTTGTCTaGATTTTCAAGCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSPLFLV*IFKLPQ
Trigger: CTGAGGAAGCTTGAAAATTCAGACAAGGAAAAGAGG...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGCCTCTTTTCCTTGTCTaGATTTTCAAGCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVPLFLV*IFKLPQ
Trigger: CTGAGGAAGCTTGAAAATTCAGACAAGGAAAAGAGG...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCACCTCTTTTCCTTGTCTaGATTTTCAAGCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPPLFLV*IFKLPQ
Trigger: CTGAGGAAGCTTGAAAATTCAGACAAGGAAAAGAGG...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTTTTCCTCATAAGCAATaGTTTCCTCTTCCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSFPHKQ*FPLPAE
Trigger: CTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAA...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACATCTTCTTTCAGTTTaGAGTGATGGTGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQHLLSV*SDGAEE
Trigger: TTCTTCTGCACCATCACTGCAAACTGAAAGAAGATG...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTCTAGTAACTCGATGTTaGTCAGGGAAGACTGGTATT +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSLVTRC*SGKTGI
Trigger: AATACCAGTCTTCCCTGAGCAACATCGAGTTACTAG...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAAGATGCTCTTGAATCATaGAAGGAGAAGTGTATATCC +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQDALES*KEKCIS
Trigger: GGATATACACTTCTCCTTGCATGATTCAAGAGCATC...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CTAAAATGTAACATTGGAAGACTTGATGCCAAAGCCCAAATAGCTTGGGGCTCCTTCTGCTCCTGCAAGTaGTTCAGTATCTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: LKCNIGRLDAKAQIAWGSFCSCK*FSIFLM
Trigger: CATCAAAAAGATACTGAAGCACTTGCAGGAGCAGAA...GGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCCAATGTTACATTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR GCA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCAAAGTCTTGGATGACTTaGTGGCTGGTGTTGTATTTG +
Preference number: 4 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPKSWMT*WLVLYL
Trigger: CAAATACAACACCAGCCAGCAAGTCATCCAAGACTT...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGAAGTCTTGGATGACTTaGTGGCTGGTGTTGTATTTG +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVKSWMT*WLVLYL
Trigger: CAAATACAACACCAGCCAGCAAGTCATCCAAGACTT...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTGCTGTTTTGCCCATTaGTCCAAGTTGGTCATAATC +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVCCFAH*SKLVII
Trigger: GATTATGACCAACTTGGAGCAATGGGCAAAACAGCA...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTGCTGTTTTGCCCATTaGTCCAAGTTGGTCATAATC +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSCCFAH*SKLVII
Trigger: GATTATGACCAACTTGGAGCAATGGGCAAAACAGCA...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TCCCTTTACAGATGTGAAAACAACGATCTTTGGTCCAAAGTCGCTAAGAAAATGGCAATGTATTTCACCTaGTCTCGGAGCTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SLYRCENNDLWSKVAKKMAMYFT*SRSWFP
Trigger: AGGAAACCAGCTCCGAGAGCAGGTGAAATACATTGC...CATTTTCTTAGCGACTTTGGACCAAAGATCGTTGTTTTCACATCTGTAAAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR GCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTTCTTGTTTTCCTGCTaGAAGTGGACCATTACACTG +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSFLFSC*KWTITL
Trigger: CAGTGTAATGGTCCACTTGCAGCAGGAAAACAAGAA...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACTTCCTCCAACTTTCTaGAATTCTCTTTCAACGTCT +
Preference number: 4 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQLPPTF*NSLSTS
Trigger: AGACGTTGAAAGAGAATTCCAGAAAGTTGGAGGAAG...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp CTAAAATGTAACATTGGAAGACTTGATGCCAAAGCCCAAATAGCTTGGGGCTCCCTTCCTCCAACTTTCTaGAATTCTCTTTCAACGTCT +
Preference number: 4 (lower is better)
Translates to: LKCNIGRLDAKAQIAWGSLPPTF*NSLSTS
Trigger: AGACGTTGAAAGAGAATTCCAGAAAGTTGGAGGAAG...GGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCCAATGTTACATTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTGGATGACTTGCTaGCTGGTGTTGTATTTGTTG +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVSWMTC*LVLYLL
Trigger: CAACAAATACAACACCAGCCAGCAAGTCATCCAAGA...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTCTTGGATGACTTGCTaGCTGGTGTTGTATTTGTTG +
Preference number: 4 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVSWMTC*LVLYLL
Trigger: CAACAAATACAACACCAGCCAGCAAGTCATCCAAGA...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGCTCCATGGCAGGAAGTaGACAAAACTCAACAAAAGT +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVLHGRK*TKLNKS
Trigger: ACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAG...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
3UTR CAA 72 bp CAGCTTATTTCGAAGTTCTTGAATGAGATCATCCTGTaGAGAGACCTTTTGCCAGACTTCAGACAGTCGTTT +
Preference number: 4 (lower is better)
Translates to: QLISKFLNEIIL*RDLLPDFRQSF
Trigger: AAACGACTGTCTGAAGTCTGGCAAAAGGTCTCTCAACAGGATGATCTCATTCAAGAACTTCGAAATAAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR TCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTTCGAAGTTCTTGAATaGGATCATCCTGTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVFEVLE*DHPVER
Trigger: TCTCTCAACAGGATGATCTCATTCAAGAACTTCGAA...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGGCTTCAGTATCTTTTTaGTGTCTTCACACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVASVSF*CLHTLL
Trigger: CAGAAGAGTGTGAAGACATCAAAAAGATACTGAAGC...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGATTAAGGACTCCTTCTaGAGGGCTATCTCTTTATTC +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVIKDSF*RAISLF
Trigger: GAATAAAGAGATAGCCCTTCAGAAGGAGTCCTTAAT...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTCATCTTCTTTCAGTTTaGAGTGATGGTGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSHLLSV*SDGAEE
Trigger: TTCTTCTGCACCATCACTGCAAACTGAAAGAAGATG...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGATGCTCTTGAATCATaGAAGGAGAAGTGTATATCC +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSDALES*KEKCIS
Trigger: GGATATACACTTCTCCTTGCATGATTCAAGAGCATC...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTGATGCTCTTGAATCATaGAAGGAGAAGTGTATATCC +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSDALES*KEKCIS
Trigger: GGATATACACTTCTCCTTGCATGATTCAAGAGCATC...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTTCTGCTCCTGCAAGTaGTTCAGTATCTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSFCSCK*FSIFLM
Trigger: CATCAAAAAGATACTGAAGCACTTGCAGGAGCAGAA...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTTTCTGCTCCTGCAAGTaGTTCAGTATCTTTTTGATG +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSFCSCK*FSIFLM
Trigger: CATCAAAAAGATACTGAAGCACTTGCAGGAGCAGAA...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp TATTCTGGTCTAAAATGTAACATTGGAAGACTTGATGCCAAAGCCCAAATAGCTTGTGTCAAGCTTTGCTaGAGGCTCTTTGTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: YSGLKCNIGRLDAKAQIACVKLC*RLFVSE
Trigger: CTCAGAGACAAAGAGCCTGCAGCAAAGCTTGACACA...AGCTATTTGGGCTTTGGCATCAAGTCTTCCAATGTTACATTTTAGACCAGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR GCA 90 bp TCCCTTTACAGATGTGAAAACAACGATCTTTGGTCCAAAGTCGCTAAGAAAATGGAAGGGGTCTTAATTTaGCTCCTCCCTTTACAGATG +
Preference number: 4 (lower is better)
Translates to: SLYRCENNDLWSKVAKKMEGVLI*LLPLQM
Trigger: CATCTGTAAAGGGAGGAGGCAAATTAAGACCCCTTC...CATTTTCTTAGCGACTTTGGACCAAAGATCGTTGTTTTCACATCTGTAAAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CCA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGCAACATCTTCACTTaGCATTCTAGTAACTCGATG +
Preference number: 4 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPCNIFT*HSSNSM
Trigger: CATCGAGTTACTAGAATGCCAAGTGAAGATGTTGCA...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp CTTTTTCATCCTTTCCTCATAAGCAATGATTTCCTCTTCCAGCTGAGCTTTCTTCCTCTTTTCCTTGTCTaGATTTTCAAGCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LFHPFLISNDFLFQLSFLPLFLV*IFKLPQ
Trigger: CTGAGGAAGCTTGAAAATTCAGACAAGGAAAAGAGG...AAGAAAGCTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAAGGATGAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGAAAACAACGATCTTTaGTCCAAAGTCGCTAAGAAA +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSENNDL*SKVAKK
Trigger: TTTCTTAGCGACTTTGGACCAAAGATCGTTGTTTTC...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537465.5
3UTR CAA 72 bp TCTTTATTCAAGTCTTGGATGACTTGCTGGCTGGTGTaGTATTTGTTGAGAGAGGATTCCAGTTGTGTAGAA +
Preference number: 4 (lower is better)
Translates to: SLFKSWMTCWLV*YLLREDSSCVE
Trigger: TTCTACACAACTGGAATCCTCTCTCAACAAATACAACACCAGCCAGCAAGTCATCCAAGACTTGAATAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp CTTTTTCATCCTTTCCTCATAAGCAATGATTTCCTCTTCCAGCTGAGCTTTCTTCATCTTCTTTCAGTTTaGAGTGATGGTGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LFHPFLISNDFLFQLSFLHLLSV*SDGAEE
Trigger: TTCTTCTGCACCATCACTGCAAACTGAAAGAAGATG...AAGAAAGCTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAAGGATGAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR GCA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTTCTTTTTAAATTCCTaGCGCAAAGCTTCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVFFLNS*RKASSS
Trigger: AGAACTTGAAGCTTTGCGGCAGGAATTTAAAAAGAA...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR GCA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTTTCTTTTTAAATTCCTaGCGCAAAGCTTCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSFFLNS*RKASSS
Trigger: AGAACTTGAAGCTTTGCGGCAGGAATTTAAAAAGAA...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR TCA 90 bp TATTCTGGTCTAAAATGTAACATTGGAAGACTTGATGCCAAAGCCCAAATAGCTGCTTCAGTATCTTTTTaGTGTCTTCACACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: YSGLKCNIGRLDAKAQIAASVSF*CLHTLL
Trigger: CAGAAGAGTGTGAAGACATCAAAAAGATACTGAAGC...AGCTATTTGGGCTTTGGCATCAAGTCTTCCAATGTTACATTTTAGACCAGAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR GCA 90 bp CTTTTTCATCCTTTCCTCATAAGCAATGATTTCCTCTTCCAGCTGAGCTTTCTTTTCTTTTTAAATTCCTaGCGCAAAGCTTCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LFHPFLISNDFLFQLSFLFFLNS*RKASSS
Trigger: AGAACTTGAAGCTTTGCGGCAGGAATTTAAAAAGAA...AAGAAAGCTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAAGGATGAAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp CGGCATGGCGGGAGCGGGGCTGCAGAGTATCCGAGGTGCTGCCGGGGCAGCGGGCGACCTTCTGCTGTTTaGCCCATTGCTCCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: RHGGSGAAEYPRCCRGSGRPSAV*PIAPSW
Trigger: CCAACTTGGAGCAATGGGCAAAACAGCAGAAGGTCG...CCCGCTGCCCCGGCAGCACCTCGGATACTCTGCAGCCCCGCTCCCGCCATGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR CAA 90 bp TCGCCAGTCGAACATGGGGACGGCAGAGGAGTGAGAATGTGCCGGGGAGGAGATGCACGCCAGCCCGCTTaGGTCTGTGAGCTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: SPVEHGDGRGVRMCRGGDARQPA*VCELRL
Trigger: CAGCCTCAGCTCACAGACCAAAGCGGGCTGGCGTGC...ATCTCCTCCCCGGCACATTCTCACTCCTCTGCCGTCCCCATGTTCGACTGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR CAA 90 bp GGCTGGCCGCATGGCCAGGCAGCTCTGCTGCAGGGTGACTTCTTGCCTCTGGGGGCCTGTGCTTGCTTCTaGTCGTGGCTGCTGTTCATT +
Preference number: 5 (lower is better)
Translates to: GWPHGQAALLQGDFLPLGACACF*SWLLFI
Trigger: AATGAACAGCAGCCACGACAAGAAGCAAGCACAGGC...CCCCAGAGGCAAGAAGTCACCCTGCAGCAGAGCTGCCTGGCCATGCGGCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CAA 90 bp CGGCATGGCGGGAGCGGGGCTGCAGAGTATCCGAGGTGCTGCCGGGGCAGCGGGTTTCCTAGTTTCTCATaGGCGACCTTCTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: RHGGSGAAEYPRCCRGSGFPSFS*ATFCCF
Trigger: AAAACAGCAGAAGGTCGCCAATGAGAAACTAGGAAA...CCCGCTGCCCCGGCAGCACCTCGGATACTCTGCAGCCCCGCTCCCGCCATGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS GCA 90 bp GAGACCCTTCTGCAGTTTCCTCTGGGTGTCCTCCAGGTGACAGCCTaGCAGTGCAGCCTCTTCTTTGCACTGGGCTGCTTGCTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: ETLLQFPLGVLQVTA*QCSLFFALGCLLSC
Trigger: GCAGCTCAGCAAGCAGCCCAGTGCAAAGAAGAGGCTGCACTGGCAGGCTGTCACCTGGAGGACACCCAGAGGAAACTGCAGAAGGGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CAA 90 bp CCTTCACCAGGTTCTGGTACTCCTCCACATGCAGGCACTGGCTGTCTTTCTGCTCCCGGCCAAGGCGAGTaGCTCCTGCGCCAAATGGAG +
Preference number: 5 (lower is better)
Translates to: PSPGSGTPPHAGTGCLSAPGQGE*LLRQME
Trigger: CTCCATTTGGCGCAGGAGCAACTCGCCTTGGCCGGG...AGCAGAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp GGCTGGCCGCATGGCCAGGCAGCTCTGCTGCAGGGTGACTTCTTGCCTCTGGGGTCTTCTAACTTGCATTaGATGGAGCCTTGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: GWPHGQAALLQGDFLPLGSSNLH*MEPCSL
Trigger: CAGGGAGCAAGGCTCCATCAAATGCAAGTTAGAAGA...CCCCAGAGGCAAGAAGTCACCCTGCAGCAGAGCTGCCTGGCCATGCGGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CAA 90 bp TCGAGGGCTTGTGTCAGGTCATCCTGGCAGGCGGCTGACTTCCGGGATAATGCATCCTTCTGCAGAGCTTaGTCCAGCTGGGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: SRACVRSSWQAADFRDNASFCRA*SSWACR
Trigger: CCTGCAGGCCCAGCTGGACAAAGCTCTGCAGAAGGA...TGCATTATCCCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACAAGCCCTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp TCGAGGGCTTGTGTCAGGTCATCCTGGCAGGCGGCTGACTTCCGGGATAATGCAAGCCTCTCCTGCTGCTaGGCCTCTTCGAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: SRACVRSSWQAADFRDNASLSCC*ASSRLF
Trigger: GAACAGTCTCGAAGAGGCCAAGCAGCAGGAGAGGCT...TGCATTATCCCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACAAGCCCTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp TTTAAGGCGGCCATCTCCTCCTGGAACTCCCTGAGCTGCTCCTCTTTGGCTGCCGAGGTCATTCTGGTGTaGCTTCTGCCACTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: FKAAISSWNSLSCSSLAAEVILV*LLPLQH
Trigger: GTGCTGCAGTGGCAGAAGCAACACCAGAATGACCTC...GGCAGCCAAAGAGGAGCAGCTCAGGGAGTTCCAGGAGGAGATGGCCGCCTTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp CATGGGGACGGCAGAGGAGTGAGAATGTGCCGGGGAGGAGATCCCTCGGCCCAGCTGCTGTTTTGCCCATaGCTCCAAGTTGGTCATAAT +
Preference number: 5 (lower is better)
Translates to: HGDGRGVRMCRGGDPSAQLLFCP*LQVGHN
Trigger: ATTATGACCAACTTGGAGCAATGGGCAAAACAGCAG...CTGGGCCGAGGGATCTCCTCCCCGGCACATTCTCACTCCTCTGCCGTCCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR CAA 90 bp GCCTCTAGTTCCACGCGCAGATCCTTCACCAGGTTCTGGTACTCCTCCACATGCGGTGGCTGCTGTTCATaGCCTCCTCCATGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: ASSSTRRSFTRFWYSSTCGGCCS*PPPCRA
Trigger: AGCTCTGCATGGAGGAGGCAATGAACAGCAGCCACC...GCATGTGGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACTAGAGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp CCTTCACCAGGTTCTGGTACTCCTCCACATGCAGGCACTGGCTGTCTTTCTGCTTCCGCCTCCTTGGACTaGTCCTGCTTAGCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PSPGSGTPPHAGTGCLSASASLD*SCLASL
Trigger: CAAGGAGGCTAAGCAGGACAAGTCCAAGGAGGCGGA...AGCAGAAAGACAGCCAGTGCCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp GCCTCTAGTTCCACGCGCAGATCCTTCACCAGGTTCTGGTACTCCTCCACATGCGCATTTGATGGAGCCTaGCTCCCTGTGCTGGTGCTT +
Preference number: 5 (lower is better)
Translates to: ASSSTRRSFTRFWYSSTCAFDGA*LPVLVL
Trigger: AAGCACCAGCACAGGGAGCAAGGCTCCATCAAATGC...GCATGTGGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACTAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp TGTCCCCAGAGAGGATGGCAGCAGGTATTGGGTCCTCAGCCTTCTGGCGGGAGCTTTTCGCCACTCAGCTaGGCAATGTATTTCACCTGC +
Preference number: 5 (lower is better)
Translates to: CPQRGWQQVLGPQPSGGSFSPLS*AMYFTC
Trigger: GCAGGTGAAATACATTGCCAAGCTGAGTGGCGAAAA...GCTCCCGCCAGAAGGCTGAGGACCCAATACCTGCTGCCATCCTCTCTGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS-3UTR CAA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAACCCGGCCAAGGCGAGTaGCTCCTGCGCCAAATGGAG +
Preference number: 5 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKPGQGE*LLRQME
Trigger: CTCCATTTGGCGCAGGAGCAACTCGCCTTGGCCGGG...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TTTAAGGCGGCCATCTCCTCCTGGAACTCCCTGAGCTGCTCCTCTTTGGCTGCCCTGTTGAGAGACCTTTaGCCAGACTTCAGACAGTCG +
Preference number: 5 (lower is better)
Translates to: FKAAISSWNSLSCSSLAALLRDL*PDFRQS
Trigger: CGACTGTCTGAAGTCTGGCAAAAGGTCTCTCAACAG...GGCAGCCAAAGAGGAGCAGCTCAGGGAGTTCCAGGAGGAGATGGCCGCCTTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp TCGAGGGCTTGTGTCAGGTCATCCTGGCAGGCGGCTGACTTCCGGGATAATGCATCCCTGTGCTGGTGCTaGATACGATCAAGCATGTCA +
Preference number: 5 (lower is better)
Translates to: SRACVRSSWQAADFRDNASLCWC*IRSSMS
Trigger: TGACATGCTTGATCGTATCAAGCACCAGCACAGGGA...TGCATTATCCCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACAAGCCCTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp CCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCTCCTTCTGCAGAGCTTaGTCCAGCTGGGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PLKKHPWKCCSGLDVDSSSFCRA*SSWACR
Trigger: CCTGCAGGCCCAGCTGGACAAAGCTCTGCAGAAGGA...GCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TCGAGGGCTTGTGTCAGGTCATCCTGGCAGGCGGCTGACTTCCGGGATAATGCATTTGCTGCAGGCTCTTaGTCTCTGAGGTCACGTGAT +
Preference number: 5 (lower is better)
Translates to: SRACVRSSWQAADFRDNAFAAGS*SLRSRD
Trigger: ATCACGTGACCTCAGAGACAAAGAGCCTGCAGCAAA...TGCATTATCCCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACAAGCCCTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp TGGGGCAACCCCTTCCAGCCCAAGGTGCCGCACACTTTCTCCCTCTGTGTGGACCTGCTGTTTTGCCCATaGCTCCAAGTTGGTCATAAT +
Preference number: 5 (lower is better)
Translates to: WGNPFQPKVPHTFSLCVDLLFCP*LQVGHN
Trigger: ATTATGACCAACTTGGAGCAATGGGCAAAACAGCAG...GTCCACACAGAGGGAGAAAGTGTGCGGCACCTTGGGCTGGAAGGGGTTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS TCA 90 bp AGGGCAATGAGGTGGCTGCTGTTCATTGCCTCCTCCATGCAGAGCTaGTTGTCCTGCAAGGTCTTCCTCTGTCTCTTGCAGACATCGTGC +
Preference number: 5 (lower is better)
Translates to: RAMRWLLFIASSMQS*LSCKVFLCLLQTSC
Trigger: GCACGATGTCTGCAAGAGACAGAGGAAGACCTTGCAGGACAATCAGCTCTGCATGGAGGAGGCAATGAACAGCAGCCACCTCATTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355636.10
ENST00000379073.9
ENST00000543746.1
CDS-3UTR CAA 90 bp AGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTAGAGCTTCCGCCTCCTTGGACTaGTCCTGCTTAGCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: RNISLAQQPGANGEGSRASASLD*SCLASL
Trigger: CAAGGAGGCTAAGCAGGACAAGTCCAAGGAGGCGGA...AGCTCTACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CAA 90 bp AGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTAGAGCTTTGCACTCCGCCTCCTaGGACTTGTCCTGCTTAGCC +
Preference number: 5 (lower is better)
Translates to: RNISLAQQPGANGEGSRALHSAS*DLSCLA
Trigger: GGCTAAGCAGGACAAGTCCAAGGAGGCGGAGTGCAA...AGCTCTACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CAA 90 bp AGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTAGAGCTGTGTCTGCCTTCTGCTaGTCCAGGAGGAGACCCTTC +
Preference number: 5 (lower is better)
Translates to: RNISLAQQPGANGEGSRAVSAFC*SRRRPF
Trigger: GAAGGGTCTCCTCCTGGACAAGCAGAAGGCAGACAC...AGCTCTACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CAA 90 bp AGTTCCACGCGCAGATCCTTCACCAGGTTCTGGTACTCCTCCACATGCAGGCACTTCAACTGCTCCCGTTaGTCCTCCAGAAGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: SSTRRSFTRFWYSSTCRHFNCSR*SSRSFV
Trigger: CACAAAGCTTCTGGAGGACAAACGGGAGCAGTTGAA...GTGCCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGTCCTTCTGCAGAGCTTaGTCCAGCTGGGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVSFCRA*SSWACR
Trigger: CCTGCAGGCCCAGCTGGACAAAGCTCTGCAGAAGGA...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGGCTGCTGGCTCTGGTaGGTTCCCTGTCCTTTTCGC +
Preference number: 5 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQEGCWLW*VPCPFR
Trigger: GCGAAAAGGACAGGGAACCAACCAGAGCCAGCAGCC...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355636.10
ENST00000379073.9
CDS TCA 90 bp TGCTTCTTGTCGTGGCTGCTGTTCATTGCCTCCTCCATGCAGAGCTaGTTGTCCTGCAAGGTCTTCCTCTGTCTCTTGCAGACATCGTGC +
Preference number: 5 (lower is better)
Translates to: CFLSWLLFIASSMQS*LSCKVFLCLLQTSC
Trigger: GCACGATGTCTGCAAGAGACAGAGGAAGACCTTGCAGGACAATCAGCTCTGCATGGAGGAGGCAATGAACAGCAGCCACGACAAGAAGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237353.15
ENST00000535461.5
ENST00000536211.5
ENST00000537465.5
ENST00000539172.5
CDS GCA 90 bp CCTGTGCTTGCTTCTTGTCGTGGCTGCTGTTCATTGCCTCCTCCATaGAGAGCTGATTGTCCTGCAAGGTCTTCCTCTGTCTCTTGCAGA +
Preference number: 5 (lower is better)
Translates to: PVLASCRGCCSLPPP*RADCPARSSSVSCR
Trigger: TCTGCAAGAGACAGAGGAAGACCTTGCAGGACAATCAGCTCTGCATGGAGGAGGCAATGAACAGCAGCCACGACAAGAAGCAAGCACAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237353.15
ENST00000535461.5
ENST00000536211.5
ENST00000537465.5
ENST00000539172.5
CDS-3UTR CAA 90 bp GGTAGTCTGGAGATAGTGCTTCTCCTTCTGCAGAGCTTTGTCCAGCTGGGCCTGGTCTTCCTCTGTCTCTaGCAGACATCGTGCAGATTC +
Preference number: 5 (lower is better)
Translates to: GSLEIVLLLLQSFVQLGLVFLCL*QTSCRF
Trigger: GAATCTGCACGATGTCTGCAAGAGACAGAGGAAGAC...CAGGCCCAGCTGGACAAAGCTCTGCAGAAGGAGAAGCACTATCTCCAGACTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGCGTGGCTGCTGTTCATaGCCTCCTCCATGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQRGCCS*PPPCRA
Trigger: AGCTCTGCATGGAGGAGGCAATGAACAGCAGCCACG...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR CAA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAATCTAGAGAGGCGATCTaGTCCCCGGCCAAGGCGAGT +
Preference number: 5 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKSREAI*SPAKAS
Trigger: ACTCGCCTTGGCCGGGGACAAGATCGCCTCTCTAGA...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GGTAGTCTGGAGATAGTGCTTCTCCTTCTGCAGAGCTTTGTCCAGCTGGGCCTGCTTCAAAGTGAGCTTTaGGGTCTCGGTGAACTCCAG +
Preference number: 5 (lower is better)
Translates to: GSLEIVLLLLQSFVQLGLLQSEL*GLGELQ
Trigger: CTGGAGTTCACCGAGACCCAAAAGCTCACTTTGAAG...CAGGCCCAGCTGGACAAAGCTCTGCAGAAGGAGAAGCACTATCTCCAGACTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp TCGAGGGCTTGTGTCAGGTCATCCTGGCAGGCGGCTGACTTCCGGGATAATGCATCCTGCTTAGCCTCCTaGACTGTCATTTCAAGTTCT +
Preference number: 5 (lower is better)
Translates to: SRACVRSSWQAADFRDNASCLAS*TVISSS
Trigger: AGAACTTGAAATGACAGTCAAGGAGGCTAAGCAGGA...TGCATTATCCCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACAAGCCCTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGTCCGCCTCCTTGGACTaGTCCTGCTTAGCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQSASLD*SCLASL
Trigger: CAAGGAGGCTAAGCAGGACAAGTCCAAGGAGGCGGA...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAAGCCTCTCCTGCTGCTaGGCCTCTTCGAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQESLSCC*ASSRLF
Trigger: GAACAGTCTCGAAGAGGCCAAGCAGCAGGAGAGGCT...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGAGCCTCTCCTGCTGCTaGGCCTCTTCGAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQSLSCC*ASSRLF
Trigger: GAACAGTCTCGAAGAGGCCAAGCAGCAGGAGAGGCT...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGTGTCTGCCTTCTGCTaGTCCAGGAGGAGACCCTTC +
Preference number: 5 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQVSAFC*SRRRPF
Trigger: GAAGGGTCTCCTCCTGGACAAGCAGAAGGCAGACAC...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTGTGTCTGCCTTCTGCTaGTCCAGGAGGAGACCCTTC +
Preference number: 5 (lower is better)
Translates to: LKKHPWKCCSGLDVDSSSVSAFC*SRRRPF
Trigger: GAAGGGTCTCCTCCTGGACAAGCAGAAGGCAGACAC...ACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TCGAGGGCTTGTGTCAGGTCATCCTGGCAGGCGGCTGACTTCCGGGATAATGCATTTTCTGTTGGAGGTTaGTTCCTTCTCAGCCATCGA +
Preference number: 5 (lower is better)
Translates to: SRACVRSSWQAADFRDNAFSVGG*FLLSHR
Trigger: TCGATGGCTGAGAAGGAACAAACCTCCAACAGAAAA...TGCATTATCCCGGAAGTCAGCCGCCTGCCAGGATGACCTGACACAAGCCCTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATGCATTTGATGGAGCCTaGCTCCCTGTGCTGGTGCTT +
Preference number: 5 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDAFDGA*LPVLVL
Trigger: AAGCACCAGCACAGGGAGCAAGGCTCCATCAAATGC...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GCCTCTAGTTCCACGCGCAGATCCTTCACCAGGTTCTGGTACTCCTCCACATGCTCTTCTAACTTGCATTaGATGGAGCCTTGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: ASSSTRRSFTRFWYSSTCSSNLH*MEPCSL
Trigger: CAGGGAGCAAGGCTCCATCAAATGCAAGTTAGAAGA...GCATGTGGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACTAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp GGTAGTCTGGAGATAGTGCTTCTCCTTCTGCAGAGCTTTGTCCAGCTGGGCCTGTTCAACTGCTCCCGTTaGTCCTCCAGAAGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: GSLEIVLLLLQSFVQLGLFNCSR*SSRSFV
Trigger: CACAAAGCTTCTGGAGGACAAACGGGAGCAGTTGAA...CAGGCCCAGCTGGACAAAGCTCTGCAGAAGGAGAAGCACTATCTCCAGACTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp TATGGAAGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTGAGCTTCTCGAGGGCTaGTGTCAGGTCATCCTGGCA +
Preference number: 5 (lower is better)
Translates to: YGRNISLAQQPGANGEGSELLEG*CQVILA
Trigger: TGCCAGGATGACCTGACACAAGCCCTCGAGAAGCTC...ACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCTTCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CAA 90 bp AGTTCCACGCGCAGATCCTTCACCAGGTTCTGGTACTCCTCCACATGCAGGCACTTTTCGCCACTCAGCTaGGCAATGTATTTCACCTGC +
Preference number: 5 (lower is better)
Translates to: SSTRRSFTRFWYSSTCRHFSPLS*AMYFTC
Trigger: GCAGGTGAAATACATTGCCAAGCTGAGTGGCGAAAA...GTGCCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGGTGGCTGCTGTTCATaGCCTCCTCCATGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQEGGCCS*PPPCRA
Trigger: AGCTCTGCATGGAGGAGGCAATGAACAGCAGCCACC...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355636.10
ENST00000379073.9
CDS-3UTR CAA 90 bp CTTCTGGCGGGAGCCCTGAGGCTGCGGACAAAGCCCTTTCATCTGAGGACTTTCGGACTGTGGGAGGAGTaGTTAAAATCCGATCTAAAG +
Preference number: 5 (lower is better)
Translates to: LLAGALRLRTKPFHLRTFGLWEE*LKSDLK
Trigger: CTTTAGATCGGATTTTAACAACTCCTCCCACAGTCC...GAAAGTCCTCAGATGAAAGGGCTTTGTCCGCAGCCTCAGGGCTCCCGCCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537792.5
CDS GCA 90 bp TGGAGGTGGTCCTTTTCGCCACTCAGCTTGGCAATGTATTTCACCTaGTCTCGGAGCTGGTTTCCTAGTTTCTCATTGGCGACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: WRWSFSPLSLAMYFT*SRSWFPSFSLATFC
Trigger: GCAGAAGGTCGCCAATGAGAAACTAGGAAACCAGCTCCGAGAGCAGGTGAAATACATTGCCAAGCTGAGTGGCGAAAAGGACCACCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR CAA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAACGTGGCTGCTGTTCATaGCCTCCTCCATGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKRGCCS*PPPCRA
Trigger: AGCTCTGCATGGAGGAGGCAATGAACAGCAGCCACG...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR CAA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGCCCGGCCAAGGCGAGTaGCTCCTGCGCCAAATGGAG +
Preference number: 5 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVPGQGE*LLRQME
Trigger: CTCCATTTGGCGCAGGAGCAACTCGCCTTGGCCGGG...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTACCCGGCCAAGGCGAGTaGCTCCTGCGCCAAATGGAG +
Preference number: 5 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLPGQGE*LLRQME
Trigger: CTCCATTTGGCGCAGGAGCAACTCGCCTTGGCCGGG...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TGTGTTGGGGCTGCTGGCTCTGGTTGGTTCCCTGTCCTTTTCGCCACTCAGCTTAGTCTCCTGATGCTCTaGAATCATGCAAGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: CVGAAGSGWFPVLFATQLSLLML*NHARRS
Trigger: ACTTCTCCTTGCATGATTCAAGAGCATCAGGAGACT...AAGCTGAGTGGCGAAAAGGACAGGGAACCAACCAGAGCCAGCAGCCCCAACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAATTGCACTCCGCCTCCTaGGACTTGTCCTGCTTAGCC +
Preference number: 5 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKLHSAS*DLSCLA
Trigger: GGCTAAGCAGGACAAGTCCAAGGAGGCGGAGTGCAA...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp AAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTATGGTGTCTGCCTTCTGCTaGTCCAGGAGGAGACCCTTC +
Preference number: 5 (lower is better)
Translates to: KKHPWKCCSGLDVDSSSMVSAFC*SRRRPF
Trigger: GAAGGGTCTCCTCCTGGACAAGCAGAAGGCAGACAC...CATACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GGTAGTCTGGAGATAGTGCTTCTCCTTCTGCAGAGCTTTGTCCAGCTGGGCCTGTCCACCCGTTTTCTGTaGGAGGTTTGTTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: GSLEIVLLLLQSFVQLGLSTRFL*EVCSFS
Trigger: TGAGAAGGAACAAACCTCCAACAGAAAACGGGTGGA...CAGGCCCAGCTGGACAAAGCTCTGCAGAAGGAGAAGCACTATCTCCAGACTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp GGTAGTCTGGAGATAGTGCTTCTCCTTCTGCAGAGCTTTGTCCAGCTGGGCCTGTCTTCTAACTTGCATTaGATGGAGCCTTGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: GSLEIVLLLLQSFVQLGLSSNLH*MEPCSL
Trigger: CAGGGAGCAAGGCTCCATCAAATGCAAGTTAGAAGA...CAGGCCCAGCTGGACAAAGCTCTGCAGAAGGAGAAGCACTATCTCCAGACTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGAGGTCATTCTGGTGTaGCTTCTGCCACTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQEEVILV*LLPLQH
Trigger: GTGCTGCAGTGGCAGAAGCAACACCAGAATGACCTC...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GAGCTAGGAGGGTATCTGTGGGTGGCTGTACAGGAAGCAAAATCGGCTTGTAGTCGACCTTCTGCTGTTTaGCCCATTGCTCCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: ELGGYLWVAVQEAKSACSRPSAV*PIAPSW
Trigger: CCAACTTGGAGCAATGGGCAAAACAGCAGAAGGTCG...ACTACAAGCCGATTTTGCTTCCTGTACAGCCACCCACAGATACCCTCCTAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAACTCGGGCCTAGGGCTTaGGTGCATAGCCTTGTGTTC +
Preference number: 5 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKLGPRA*VHSLVF
Trigger: GAACACAAGGCTATGCACCAAAGCCCTAGGCCCGAG...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GCCTCTAGTTCCACGCGCAGATCCTTCACCAGGTTCTGGTACTCCTCCACATGCTCATCTTTCATTTCCTaGGCAGCTCTCAATTCTCCT +
Preference number: 5 (lower is better)
Translates to: ASSSTRRSFTRFWYSSTCSSFIS*AALNSP
Trigger: AGGAGAATTGAGAGCTGCCAAGGAAATGAAAGATGA...GCATGTGGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACTAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGTGCAGGCTTAACAGCTaGCTGTTCAGGCTGCTCACT +
Preference number: 5 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQCRLNS*LFRLLT
Trigger: AGTGAGCAGCCTGAACAGCAAGCTGTTAAGCCTGCA...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATGTCTTCCTCTGTCTCTaGCAGACATCGTGCAGATTC +
Preference number: 5 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDVFLCL*QTSCRF
Trigger: GAATCTGCACGATGTCTGCAAGAGACAGAGGAAGAC...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAATCTAGAGAGGCGATCTaGTCCCCGGCCAAGGCGAGT +
Preference number: 5 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQSREAI*SPAKAS
Trigger: ACTCGCCTTGGCCGGGGACAAGATCGCCTCTCTAGA...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CTCTGCTGCAGGGTGACTTCTTGCCTCTGGGGTAACATGGAGTTTACAGGTGGCAGTCTCCTGATGCTCTaGAATCATGCAAGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: LCCRVTSCLWGNMEFTGGSLLML*NHARRS
Trigger: ACTTCTCCTTGCATGATTCAAGAGCATCAGGAGACT...GCCACCTGTAAACTCCATGTTACCCCAGAGGCAAGAAGTCACCCTGCAGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CAA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATCTGTTGAGAGACCTTTaGCCAGACTTCAGACAGTCG +
Preference number: 5 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDLLRDL*PDFRQS
Trigger: CGACTGTCTGAAGTCTGGCAAAAGGTCTCTCAACAG...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGTCCGCCTCCTTGGACTaGTCCTGCTTAGCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWSASLD*SCLASL
Trigger: CAAGGAGGCTAAGCAGGACAAGTCCAAGGAGGCGGA...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGGAGCTTCTCGAGGGCTaGTGTCAGGTCATCCTGGCA +
Preference number: 5 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWELLEG*CQVILA
Trigger: TGCCAGGATGACCTGACACAAGCCCTCGAGAAGCTC...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp AGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTAGAGCTTTTGCTGCAGGCTCTTaGTCTCTGAGGTCACGTGAT +
Preference number: 5 (lower is better)
Translates to: RNISLAQQPGANGEGSRAFAAGS*SLRSRD
Trigger: ATCACGTGACCTCAGAGACAAAGAGCCTGCAGCAAA...AGCTCTACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CAA 90 bp GGTGCTCTTACGGGGTTTCCAGACGTAGAAGGAAGATGCCTCTTCTACCTGTTCTTTGCTGCAGGCTCTTaGTCTCTGAGGTCACGTGAT +
Preference number: 5 (lower is better)
Translates to: GALTGFPDVEGRCLFYLFFAAGS*SLRSRD
Trigger: ATCACGTGACCTCAGAGACAAAGAGCCTGCAGCAAA...GAACAGGTAGAAGAGGCATCTTCCTTCTACGTCTGGAAACCCCGTAAGAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CAA 90 bp CTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTGGTCTGTGTCAAGCTTaGCTGCAGGCTCTTTGTCTC +
Preference number: 5 (lower is better)
Translates to: LKKHPWKCCSGLDVDSSSGLCQA*LQALCL
Trigger: GAGACAAAGAGCCTGCAGCAAAGCTTGACACAGACC...ACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TATGGAAGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTGGTCTGTGTCAAGCTTaGCTGCAGGCTCTTTGTCTC +
Preference number: 5 (lower is better)
Translates to: YGRNISLAQQPGANGEGSGLCQA*LQALCL
Trigger: GAGACAAAGAGCCTGCAGCAAAGCTTGACACAGACC...ACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCTTCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CAA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGCGACCTTCTGCTGTTTaGCCCATTGCTCCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVRPSAV*PIAPSW
Trigger: CCAACTTGGAGCAATGGGCAAAACAGCAGAAGGTCG...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCTCGGGCCTAGGGCTTaGGTGCATAGCCTTGTGTTC +
Preference number: 5 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWLGPRA*VHSLVF
Trigger: GAACACAAGGCTATGCACCAAAGCCCTAGGCCCGAG...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TCTGAGTCTCCTGATGCTCTTGAATCATGCAAGGAGAAGTGTATATCCGTACCTGGCTGCTGGCTCTGGTaGGTTCCCTGTCCTTTTCGC +
Preference number: 5 (lower is better)
Translates to: SESPDALESCKEKCISVPGCWLW*VPCPFR
Trigger: GCGAAAAGGACAGGGAACCAACCAGAGCCAGCAGCC...AGGTACGGATATACACTTCTCCTTGCATGATTCAAGAGCATCAGGAGACTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp CTAAAATGTAACATTGGAAGACTTGATGCCAAAGCCCAAATAGCTTGGGGCTCCGCCCAGGATCCGCAGTaGGCTGAGCAGTTAGCTGCA +
Preference number: 5 (lower is better)
Translates to: LKCNIGRLDAKAQIAWGSAQDPQ*AEQLAA
Trigger: TGCAGCTAACTGCTCAGCCAACTGCGGATCCTGGGC...GGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCCAATGTTACATTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS TCA 90 bp CCTGCAAGGTCTTCCTCTGTCTCTTGCAGACATCGTGCAGATTCTTaGTGTCAAGTTGCAGGCTTAACAGCTTGCTGTTCAGGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: PARSSSVSCRHRADS*CQVAGLTACCSGCS
Trigger: TGAGCAGCCTGAACAGCAAGCTGTTAAGCCTGCAACTTGACATCAAGAATCTGCACGATGTCTGCAAGAGACAGAGGAAGACCTTGCAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000535461.5
ENST00000536211.5
ENST00000537465.5
ENST00000539172.5
ENST00000540440.1
ENST00000543746.1
CDS-3UTR CAA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTTCTAGAGAGGCGATCTaGTCCCCGGCCAAGGCGAGT +
Preference number: 5 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSSREAI*SPAKAS
Trigger: ACTCGCCTTGGCCGGGGACAAGATCGCCTCTCTAGA...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp AGTTCCACGCGCAGATCCTTCACCAGGTTCTGGTACTCCTCCACATGCAGGCACTGTATATCCGTACCTTaGAATGATCACCCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: SSTRRSFTRFWYSSTCRHCISVP*NDHPCS
Trigger: AGAACAAGGGTGATCATTCAAAGGTACGGATATACA...GTGCCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAACTTCAAAGTGAGCTTTaGGGTCTCGGTGAACTCCAG +
Preference number: 5 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQELQSEL*GLGELQ
Trigger: CTGGAGTTCACCGAGACCCAAAAGCTCACTTTGAAG...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TGTGCTCATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGAGCCTCTCCTGCTGCTaGGCCTCTTCGAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: CAHAHVFISEFGPGDGSMSLSCC*ASSRLF
Trigger: GAACAGTCTCGAAGAGGCCAAGCAGCAGGAGAGGCT...CATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATGAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR CAA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCCACCCGTTTTCTGTaGGAGGTTTGTTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDSTRFL*EVCSFS
Trigger: TGAGAAGGAACAAACCTCCAACAGAAAACGGGTGGA...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GGTAGTCTGGAGATAGTGCTTCTCCTTCTGCAGAGCTTTGTCCAGCTGGGCCTGAGCTGCCTCTTTTCCTaGTCTGAATTTTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: GSLEIVLLLLQSFVQLGLSCLFS*SEFSSF
Trigger: GAAGCTTGAAAATTCAGACAAGGAAAAGAGGCAGCT...CAGGCCCAGCTGGACAAAGCTCTGCAGAAGGAGAAGCACTATCTCCAGACTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAATCCCTGTGCTGGTGCTaGATACGATCAAGCATGTCA +
Preference number: 5 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQESLCWC*IRSSMS
Trigger: TGACATGCTTGATCGTATCAAGCACCAGCACAGGGA...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTTCCCTGTGCTGGTGCTaGATACGATCAAGCATGTCA +
Preference number: 5 (lower is better)
Translates to: LKKHPWKCCSGLDVDSSSSLCWC*IRSSMS
Trigger: TGACATGCTTGATCGTATCAAGCACCAGCACAGGGA...ACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGTTCAACTGCTCCCGTTaGTCCTCCAGAAGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVFNCSR*SSRSFV
Trigger: CACAAAGCTTCTGGAGGACAAACGGGAGCAGTTGAA...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCCTTCTGCAGAGCTTaGTCCAGCTGGGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVSFCRA*SSWACR
Trigger: CCTGCAGGCCCAGCTGGACAAAGCTCTGCAGAAGGA...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAAGAGCTTCTCGAGGGCTaGTGTCAGGTCATCCTGGCA +
Preference number: 5 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQELLEG*CQVILA
Trigger: TGCCAGGATGACCTGACACAAGCCCTCGAGAAGCTC...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGTTTGCTGCAGGCTCTTaGTCTCTGAGGTCACGTGAT +
Preference number: 5 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQFAAGS*SLRSRD
Trigger: ATCACGTGACCTCAGAGACAAAGAGCCTGCAGCAAA...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAGGTCTGTGTCAAGCTTaGCTGCAGGCTCTTTGTCTC +
Preference number: 5 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKGLCQA*LQALCL
Trigger: GAGACAAAGAGCCTGCAGCAAAGCTTGACACAGACC...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TCTGAGTCTCCTGATGCTCTTGAATCATGCAAGGAGAAGTGTATATCCGTACCTCTCGGGCCTAGGGCTTaGGTGCATAGCCTTGTGTTC +
Preference number: 5 (lower is better)
Translates to: SESPDALESCKEKCISVPLGPRA*VHSLVF
Trigger: GAACACAAGGCTATGCACCAAAGCCCTAGGCCCGAG...AGGTACGGATATACACTTCTCCTTGCATGATTCAAGAGCATCAGGAGACTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp TCTTTCTTCAAAGTGAGCTTTTGGGTCTCGGTGAACTCCAGCTGCAGCTCCTGCACATCGTGCAGATTCTaGATGTCAAGTTGCAGGCTT +
Preference number: 5 (lower is better)
Translates to: SFFKVSFWVSVNSSCSSCTSCRF*MSSCRL
Trigger: AAGCCTGCAACTTGACATCAAGAATCTGCACGATGT...GCAGGAGCTGCAGCTGGAGTTCACCGAGACCCAAAAGCTCACTTTGAAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp AGTTCCACGCGCAGATCCTTCACCAGGTTCTGGTACTCCTCCACATGCAGGCACCTTATTTCGAAGTTCTaGAATGAGATCATCCTGTTG +
Preference number: 5 (lower is better)
Translates to: SSTRRSFTRFWYSSTCRHLISKF*NEIILL
Trigger: CAACAGGATGATCTCATTCAAGAACTTCGAAATAAG...GTGCCTGCATGTGGAGGAGTACCAGAACCTGGTGAAGGATCTGCGCGTGGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTCCGCCTCCTTGGACTaGTCCTGCTTAGCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSSASLD*SCLASL
Trigger: CAAGGAGGCTAAGCAGGACAAGTCCAAGGAGGCGGA...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTGCACTCCGCCTCCTaGGACTTGTCCTGCTTAGCC +
Preference number: 5 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVLHSAS*DLSCLA
Trigger: GGCTAAGCAGGACAAGTCCAAGGAGGCGGAGTGCAA...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTATTGCACTCCGCCTCCTaGGACTTGTCCTGCTTAGCC +
Preference number: 5 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLLHSAS*DLSCLA
Trigger: GGCTAAGCAGGACAAGTCCAAGGAGGCGGAGTGCAA...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAGTGTCTGCCTTCTGCTaGTCCAGGAGGAGACCCTTC +
Preference number: 5 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLVSAFC*SRRRPF
Trigger: GAAGGGTCTCCTCCTGGACAAGCAGAAGGCAGACAC...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TGTGCTCATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGCATTTGATGGAGCCTaGCTCCCTGTGCTGGTGCTT +
Preference number: 5 (lower is better)
Translates to: CAHAHVFISEFGPGDGSMAFDGA*LPVLVL
Trigger: AAGCACCAGCACAGGGAGCAAGGCTCCATCAAATGC...CATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATGAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR CAA 90 bp CTAAAATGTAACATTGGAAGACTTGATGCCAAAGCCCAAATAGCTTGGGGCTCCGCATTTGATGGAGCCTaGCTCCCTGTGCTGGTGCTT +
Preference number: 5 (lower is better)
Translates to: LKCNIGRLDAKAQIAWGSAFDGA*LPVLVL
Trigger: AAGCACCAGCACAGGGAGCAAGGCTCCATCAAATGC...GGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCCAATGTTACATTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CAA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATCTCTTTATTCAAGTCTaGGATGACTTGCTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDLFIQV*DDLLAG
Trigger: ACCAGCCAGCAAGTCATCCAAGACTTGAATAAAGAG...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCAGAGCTTCTCGAGGGCTaGTGTCAGGTCATCCTGGCA +
Preference number: 5 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPELLEG*CQVILA
Trigger: TGCCAGGATGACCTGACACAAGCCCTCGAGAAGCTC...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GCTCTTGAATCATGCAAGGAGAAGTGTATATCCGTACCTTTGAATGATCACCCTGAGCTTCTCGAGGGCTaGTGTCAGGTCATCCTGGCA +
Preference number: 5 (lower is better)
Translates to: ALESCKEKCISVPLNDHPELLEG*CQVILA
Trigger: TGCCAGGATGACCTGACACAAGCCCTCGAGAAGCTC...AGGGTGATCATTCAAAGGTACGGATATACACTTCTCCTTGCATGATTCAAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAATTTGCTGCAGGCTCTTaGTCTCTGAGGTCACGTGAT +
Preference number: 5 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKFAAGS*SLRSRD
Trigger: ATCACGTGACCTCAGAGACAAAGAGCCTGCAGCAAA...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGCTGAGCTTTCTTCTCTaGGGTCTGTGTCAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVLSFLL*GLCQAL
Trigger: CAAAGCTTGACACAGACCCAAGAGAAGAAAGCTCAG...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GGAAGACTTGATGCCAAAGCCCAAATAGCTTGGGGCTCCACCAGATATGAGATGCTGAGCTTTCTTCTCTaGGGTCTGTGTCAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: GRLDAKAQIAWGSTRYEMLSFLL*GLCQAL
Trigger: CAAAGCTTGACACAGACCCAAGAGAAGAAAGCTCAG...CATCTCATATCTGGTGGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CAA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGCTTTGGTGCATAGCCTaGTGTTCTCGGCTTTCATCT +
Preference number: 5 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVLWCIA*CSRLSS
Trigger: AGATGAAAGCCGAGAACACAAGGCTATGCACCAAAG...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAACTTTGGTGCATAGCCTaGTGTTCTCGGCTTTCATCT +
Preference number: 5 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQELWCIA*CSRLSS
Trigger: AGATGAAAGCCGAGAACACAAGGCTATGCACCAAAG...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTCTTTGGTGCATAGCCTaGTGTTCTCGGCTTTCATCT +
Preference number: 5 (lower is better)
Translates to: LKKHPWKCCSGLDVDSSSLWCIA*CSRLSS
Trigger: AGATGAAAGCCGAGAACACAAGGCTATGCACCAAAG...ACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTACTCGGGCCTAGGGCTTaGGTGCATAGCCTTGTGTTC +
Preference number: 5 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLLGPRA*VHSLVF
Trigger: GAACACAAGGCTATGCACCAAAGCCCTAGGCCCGAG...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTGGTGAGGTCCATTCTTaGACCCATATCCTGGGGCAA +
Preference number: 5 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTGEVHS*THILGQ
Trigger: TTGCCCCAGGATATGGGTCAAAGAATGGACCTCACC...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS TCA 90 bp GTTTGTCTGAGATCCATAGCAGACGCTGCTCCCCTTGTATCACTATaGTCTGATATTTTCAGGGCAATGAGGTGGCTGCTGTTCATTGCC +
Preference number: 5 (lower is better)
Translates to: VCLRSIADAAPLVSL*SDIFRAMRWLLFIA
Trigger: GGCAATGAACAGCAGCCACCTCATTGCCCTGAAAATATCAGATCATAGTGATACAAGGGGAGCAGCGTCTGCTATGGATCTCAGACAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355636.10
ENST00000379073.9
ENST00000543746.1
CDS GCA 90 bp TTCCTCTGTCTCTTGCAGACATCGTGCAGATTCTTGATGTCAAGTTaGAGGCTTAACAGCTTGCTGTTCAGGCTGCTCACTTCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: FLCLLQTSCRFLMSS*RLNSLLFRLLTSLS
Trigger: AGACAGAGAAGTGAGCAGCCTGAACAGCAAGCTGTTAAGCCTGCAACTTGACATCAAGAATCTGCACGATGTCTGCAAGAGACAGAGGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000535461.5
ENST00000536211.5
ENST00000537465.5
ENST00000539172.5
ENST00000540440.1
ENST00000543746.1
CDS-3UTR CAA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAACATCGTGCAGATTCTaGATGTCAAGTTGCAGGCTT +
Preference number: 5 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQETSCRF*MSSCRL
Trigger: AAGCCTGCAACTTGACATCAAGAATCTGCACGATGT...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CTTTTTCATCCTTTCCTCATAAGCAATGATTTCCTCTTCCAGCTGAGCTTTCTTTCTAGAGAGGCGATCTaGTCCCCGGCCAAGGCGAGT +
Preference number: 5 (lower is better)
Translates to: LFHPFLISNDFLFQLSFLSREAI*SPAKAS
Trigger: ACTCGCCTTGGCCGGGGACAAGATCGCCTCTCTAGA...AAGAAAGCTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAAGGATGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAAGTCTCCTGATGCTCTaGAATCATGCAAGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQESLLML*NHARRS
Trigger: ACTTCTCCTTGCATGATTCAAGAGCATCAGGAGACT...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TTCCTGCCGCAAAGCTTCAAGTTCTCCCTCCATCAGCTTCTCATGCTCTTTGCTAATGAGATCATCCTGTaGAGAGACCTTTTGCCAGAC +
Preference number: 5 (lower is better)
Translates to: FLPQSFKFSLHQLLMLFANEIIL*RDLLPD
Trigger: GTCTGGCAAAAGGTCTCTCAACAGGATGATCTCATT...AGCAAAGAGCATGAGAAGCTGATGGAGGGAGAACTTGAAGCTTTGCGGCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp CTCTGCTGCAGGGTGACTTCTTGCCTCTGGGGTAACATGGAGTTTACAGGTGGCTGCTTCAGTATCTTTTaGATGTCTTCACACTCTTCT +
Preference number: 5 (lower is better)
Translates to: LCCRVTSCLWGNMEFTGGCFSIF*MSSHSS
Trigger: AGAAGAGTGTGAAGACATCAAAAAGATACTGAAGCA...GCCACCTGTAAACTCCATGTTACCCCAGAGGCAAGAAGTCACCCTGCAGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CAA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGTCCTGCTTAGCCTCCTaGACTGTCATTTCAAGTTCT +
Preference number: 5 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQSCLAS*TVISSS
Trigger: AGAACTTGAAATGACAGTCAAGGAGGCTAAGCAGGA...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATAGCTGCCTCTTTTCCTaGTCTGAATTTTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDSCLFS*SEFSSF
Trigger: GAAGCTTGAAAATTCAGACAAGGAAAAGAGGCAGCT...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGTCCCTGTGCTGGTGCTaGATACGATCAAGCATGTCA +
Preference number: 5 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWSLCWC*IRSSMS
Trigger: TGACATGCTTGATCGTATCAAGCACCAGCACAGGGA...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATAGATCTTCTTCTAACTaGCATTTGATGGAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDRSSSN*HLMEPC
Trigger: GCAAGGCTCCATCAAATGCAAGTTAGAAGAAGATCT...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp AAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTATGAGCTTCTCATGCTCTTaGCTCTTCTTCAACTGCTCC +
Preference number: 5 (lower is better)
Translates to: KKHPWKCCSGLDVDSSSMSFSCS*LFFNCS
Trigger: GGAGCAGTTGAAGAAGAGCAAAGAGCATGAGAAGCT...CATACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGACTTGCTGGCTGGTGTaGTATTTGTTGAGAGAGGAT +
Preference number: 5 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQTCWLV*YLLRED
Trigger: ATCCTCTCTCAACAAATACAACACCAGCCAGCAAGT...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAACAAGTCTTGGATGACTaGCTGGCTGGTGTTGTATTT +
Preference number: 5 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQEQVLDD*LAGVVF
Trigger: AAATACAACACCAGCCAGCAAGTCATCCAAGACTTG...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GGAAGACTTGATGCCAAAGCCCAAATAGCTTGGGGCTCCACCAGATATGAGATGCTCTTTATTCAAGTCTaGGATGACTTGCTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: GRLDAKAQIAWGSTRYEMLFIQV*DDLLAG
Trigger: ACCAGCCAGCAAGTCATCCAAGACTTGAATAAAGAG...CATCTCATATCTGGTGGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CAA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAACTCTTTATTCAAGTCTaGGATGACTTGCTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQELFIQV*DDLLAG
Trigger: ACCAGCCAGCAAGTCATCCAAGACTTGAATAAAGAG...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CTTTTTCATCCTTTCCTCATAAGCAATGATTTCCTCTTCCAGCTGAGCTTTCTTTCCTTCTGCAGAGCTTaGTCCAGCTGGGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LFHPFLISNDFLFQLSFLSFCRA*SSWACR
Trigger: CCTGCAGGCCCAGCTGGACAAAGCTCTGCAGAAGGA...AAGAAAGCTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAAGGATGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp TGTGCTCATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGGTCTGTGTCAAGCTTaGCTGCAGGCTCTTTGTCTC +
Preference number: 5 (lower is better)
Translates to: CAHAHVFISEFGPGDGSMGLCQA*LQALCL
Trigger: GAGACAAAGAGCCTGCAGCAAAGCTTGACACAGACC...CATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATGAGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR CAA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAGAGGTCATTCTGGTGTaGCTTCTGCCACTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLEVILV*LLPLQH
Trigger: GTGCTGCAGTGGCAGAAGCAACACCAGAATGACCTC...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGAGGTCATTCTGGTGTaGCTTCTGCCACTGCAGCAC +
Preference number: 5 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSEVILV*LLPLQH
Trigger: GTGCTGCAGTGGCAGAAGCAACACCAGAATGACCTC...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAACTGCTGTTTTGCCCATaGCTCCAAGTTGGTCATAAT +
Preference number: 5 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQELLFCP*LQVGHN
Trigger: ATTATGACCAACTTGGAGCAATGGGCAAAACAGCAG...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TGTGCTCATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGGTGAGGTCCATTCTTaGACCCATATCCTGGGGCAA +
Preference number: 5 (lower is better)
Translates to: CAHAHVFISEFGPGDGSMGEVHS*THILGQ
Trigger: TTGCCCCAGGATATGGGTCAAAGAATGGACCTCACC...CATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATGAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR CAA 90 bp TCTGAGTCTCCTGATGCTCTTGAATCATGCAAGGAGAAGTGTATATCCGTACCTGGTGAGGTCCATTCTTaGACCCATATCCTGGGGCAA +
Preference number: 5 (lower is better)
Translates to: SESPDALESCKEKCISVPGEVHS*THILGQ
Trigger: TTGCCCCAGGATATGGGTCAAAGAATGGACCTCACC...AGGTACGGATATACACTTCTCCTTGCATGATTCAAGAGCATCAGGAGACTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTTTATTTCAGAGTTaGGGCCTGGAGATGGTAGTA +
Preference number: 5 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDSLFQS*GLEMVV
Trigger: TACTACCATCTCCAGGCCCAAACTCTGAAATAAAGA...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAAGTCTTCCTCTGTCTCTaGCAGACATCGTGCAGATTC +
Preference number: 5 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQVFLCL*QTSCRF
Trigger: GAATCTGCACGATGTCTGCAAGAGACAGAGGAAGAC...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGGCCTGTGCTTGCTTCTaGTCGTGGCTGCTGTTCATT +
Preference number: 5 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVACACF*SWLLFI
Trigger: AATGAACAGCAGCCACGACAAGAAGCAAGCACAGGC...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR CAA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAAGTCTCCTGATGCTCTaGAATCATGCAAGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKSLLML*NHARRS
Trigger: ACTTCTCCTTGCATGATTCAAGAGCATCAGGAGACT...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp AAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTATGAATGAGATCATCCTGTaGAGAGACCTTTTGCCAGAC +
Preference number: 5 (lower is better)
Translates to: KKHPWKCCSGLDVDSSSMNEIIL*RDLLPD
Trigger: GTCTGGCAAAAGGTCTCTCAACAGGATGATCTCATT...CATACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CTTTTTCATCCTTTCCTCATAAGCAATGATTTCCTCTTCCAGCTGAGCTTTCTTAGCCTCTCCTGCTGCTaGGCCTCTTCGAGACTGTTC +
Preference number: 5 (lower is better)
Translates to: LFHPFLISNDFLFQLSFLSLSCC*ASSRLF
Trigger: GAACAGTCTCGAAGAGGCCAAGCAGCAGGAGAGGCT...AAGAAAGCTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAAGGATGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGAGCTGCCTCTTTTCCTaGTCTGAATTTTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVSCLFS*SEFSSF
Trigger: GAAGCTTGAAAATTCAGACAAGGAAAAGAGGCAGCT...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGAGATCTTCTTCTAACTaGCATTTGATGGAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: SEFGPGDGSMVLKLTPWQRSSSN*HLMEPC
Trigger: GCAAGGCTCCATCAAATGCAAGTTAGAAGAAGATCT...CTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TGCATCATAGGCTTCTTTGGTGATGGTAGTCTGGAGATAGTGCTTCTCCTTCTGAGCTTCTCATGCTCTTaGCTCTTCTTCAACTGCTCC +
Preference number: 5 (lower is better)
Translates to: CIIGFFGDGSLEIVLLLLSFSCS*LFFNCS
Trigger: GGAGCAGTTGAAGAAGAGCAAAGAGCATGAGAAGCT...CAGAAGGAGAAGCACTATCTCCAGACTACCATCACCAAAGAAGCCTATGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGAGCTTCTCATGCTCTTaGCTCTTCTTCAACTGCTCC +
Preference number: 5 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWSFSCS*LFFNCS
Trigger: GGAGCAGTTGAAGAAGAGCAAAGAGCATGAGAAGCT...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAACTGGTGTTGTATTTGTaGAGAGAGGATTCCAGTTGT +
Preference number: 5 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQELVLYL*REDSSC
Trigger: ACAACTGGAATCCTCTCTCAACAAATACAACACCAG...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGCTGGTGTTGTATTTGTaGAGAGAGGATTCCAGTTGT +
Preference number: 5 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVLVLYL*REDSSC
Trigger: ACAACTGGAATCCTCTCTCAACAAATACAACACCAG...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TATGGAAGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTCTGGTGTTGTATTTGTaGAGAGAGGATTCCAGTTGT +
Preference number: 5 (lower is better)
Translates to: YGRNISLAQQPGANGEGSLVLYL*REDSSC
Trigger: ACAACTGGAATCCTCTCTCAACAAATACAACACCAG...ACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCTTCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CAA 90 bp CTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTCTGGTGTTGTATTTGTaGAGAGAGGATTCCAGTTGT +
Preference number: 5 (lower is better)
Translates to: LKKHPWKCCSGLDVDSSSLVLYL*REDSSC
Trigger: ACAACTGGAATCCTCTCTCAACAAATACAACACCAG...ACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCGGTCTGTGTCAAGCTTaGCTGCAGGCTCTTTGTCTC +
Preference number: 5 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVGLCQA*LQALCL
Trigger: GAGACAAAGAGCCTGCAGCAAAGCTTGACACAGACC...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCTGAGCTTTCTTCTCTaGGGTCTGTGTCAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTLSFLL*GLCQAL
Trigger: CAAAGCTTGACACAGACCCAAGAGAAGAAAGCTCAG...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAATCTCCTCTAGCTTCTaGTCAAAGGCGTGCACCTCC +
Preference number: 5 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLISSSF*SKACTS
Trigger: GGAGGTGCACGCCTTTGACAAGAAGCTAGAGGAGAT...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGATCTCCTCTAGCTTCTaGTCAAAGGCGTGCACCTCC +
Preference number: 5 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVISSSF*SKACTS
Trigger: GGAGGTGCACGCCTTTGACAAGAAGCTAGAGGAGAT...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTATCTCCTCTAGCTTCTaGTCAAAGGCGTGCACCTCC +
Preference number: 5 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSISSSF*SKACTS
Trigger: GGAGGTGCACGCCTTTGACAAGAAGCTAGAGGAGAT...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTTGGCTGCCAGCATCTaGAGGTCATTCTGGTGTTGC +
Preference number: 5 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVLAASI*RSFWCC
Trigger: GCAACACCAGAATGACCTCAAGATGCTGGCAGCCAA...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTTGGCTGCCAGCATCTaGAGGTCATTCTGGTGTTGC +
Preference number: 5 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSLAASI*RSFWCC
Trigger: GCAACACCAGAATGACCTCAAGATGCTGGCAGCCAA...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTTTGGCTGCCAGCATCTaGAGGTCATTCTGGTGTTGC +
Preference number: 5 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSLAASI*RSFWCC
Trigger: GCAACACCAGAATGACCTCAAGATGCTGGCAGCCAA...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATTGGCTGCCAGCATCTaGAGGTCATTCTGGTGTTGC +
Preference number: 5 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPLAASI*RSFWCC
Trigger: GCAACACCAGAATGACCTCAAGATGCTGGCAGCCAA...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTACGACCTTCTGCTGTTTaGCCCATTGCTCCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLRPSAV*PIAPSW
Trigger: CCAACTTGGAGCAATGGGCAAAACAGCAGAAGGTCG...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTCGACCTTCTGCTGTTTaGCCCATTGCTCCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSRPSAV*PIAPSW
Trigger: CCAACTTGGAGCAATGGGCAAAACAGCAGAAGGTCG...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGTTTCCTAGTTTCTCATaGGCGACCTTCTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: FGPGDGSMVLKLTPWQEVFPSFS*ATFCCF
Trigger: AAAACAGCAGAAGGTCGCCAATGAGAAACTAGGAAA...CACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCTTTGGTGCATAGCCTaGTGTTCTCGGCTTTCATCT +
Preference number: 5 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWLWCIA*CSRLSS
Trigger: AGATGAAAGCCGAGAACACAAGGCTATGCACCAAAG...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCAGGTGAGGTCCATTCTTaGACCCATATCCTGGGGCAA +
Preference number: 5 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPGEVHS*THILGQ
Trigger: TTGCCCCAGGATATGGGTCAAAGAATGGACCTCACC...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAATCTTTATTTCAGAGTTaGGGCCTGGAGATGGTAGTA +
Preference number: 5 (lower is better)
Translates to: EFGPGDGSMVLKLTPWQESLFQS*GLEMVV
Trigger: TACTACCATCTCCAGGCCCAAACTCTGAAATAAAGA...TTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATTCTAGCAGTTCTTTATTTCAGAGTTaGGGCCTGGAGATGGTAGTA +
Preference number: 5 (lower is better)
Translates to: LKKHPWKCCSGLDVDSSSSLFQS*GLEMVV
Trigger: TACTACCATCTCCAGGCCCAAACTCTGAAATAAAGA...ACTGCTAGAATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537465.5
CDS GCA 90 bp TTCATCTTCTTCTCTTCTATCTCCTTCTTCAGCTTCTTGTTTTCCTaGTGCAAGTGGACCATTACACTGTGGAGGTGGTCCTTTTCGCCA +
Preference number: 5 (lower is better)
Translates to: FIFFSSISFFSFLFS*CKWTITLWRWSFSP
Trigger: TGGCGAAAAGGACCACCTCCACAGTGTAATGGTCCACTTGCAGCAGGAAAACAAGAAGCTGAAGAAGGAGATAGAAGAGAAGAAGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR CAA 90 bp CCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAATCATCTTTCATTTCCTaGGCAGCTCTCAATTCTCCT +
Preference number: 5 (lower is better)
Translates to: PGDGSMVLKLTPWQEVDKSSFIS*AALNSP
Trigger: AGGAGAATTGAGAGCTGCCAAGGAAATGAAAGATGA...TTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAGTCTTCCTCTGTCTCTaGCAGACATCGTGCAGATTC +
Preference number: 5 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLVFLCL*QTSCRF
Trigger: GAATCTGCACGATGTCTGCAAGAGACAGAGGAAGAC...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGTCTAGTAACTCGATGTaGCTCAGGGAAGACTGGTAT +
Preference number: 5 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWSSNSM*LREDWY
Trigger: ATACCAGTCTTCCCTGAGCAACATCGAGTTACTAGA...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TGCATCATAGGCTTCTTTGGTGATGGTAGTCTGGAGATAGTGCTTCTCCTTCTGAGTCTCCTGATGCTCTaGAATCATGCAAGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: CIIGFFGDGSLEIVLLLLSLLML*NHARRS
Trigger: ACTTCTCCTTGCATGATTCAAGAGCATCAGGAGACT...CAGAAGGAGAAGCACTATCTCCAGACTACCATCACCAAAGAAGCCTATGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCCTGTTGAGAGACCTTTaGCCAGACTTCAGACAGTCG +
Preference number: 5 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVLLRDL*PDFRQS
Trigger: CGACTGTCTGAAGTCTGGCAAAAGGTCTCTCAACAG...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CACTGTCCTCTGAAGAAACACCCGTGGAAATGCTGCTCAGGGCTAGATGTGGATCTTATTTCGAAGTTCTaGAATGAGATCATCCTGTTG +
Preference number: 5 (lower is better)
Translates to: HCPLKKHPWKCCSGLDVDLISKF*NEIILL
Trigger: CAACAGGATGATCTCATTCAAGAACTTCGAAATAAG...ATCCACATCTAGCCCTGAGCAGCATTTCCACGGGTGTTTCTTCAGAGGACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp AGAAACATTTCTCTGGCTCAGCAACCAGGTGCCAATGGGGAGGGAAGTAGAGCTTGCTTCAGTATCTTTTaGATGTCTTCACACTCTTCT +
Preference number: 5 (lower is better)
Translates to: RNISLAQQPGANGEGSRACFSIF*MSSHSS
Trigger: AGAAGAGTGTGAAGACATCAAAAAGATACTGAAGCA...AGCTCTACTTCCCTCCCCATTGGCACCTGGTTGCTGAGCCAGAGAAATGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CAA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTCTTCAAAGTGAGCTTTaGGGTCTCGGTGAACTCCAG +
Preference number: 5 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSLQSEL*GLGELQ
Trigger: CTGGAGTTCACCGAGACCCAAAAGCTCACTTTGAAG...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTTTTTCTGTTGGAGGTTaGTTCCTTCTCAGCCATCGA +
Preference number: 5 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTFSVGG*FLLSHR
Trigger: TCGATGGCTGAGAAGGAACAAACCTCCAACAGAAAA...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAATCCACCCGTTTTCTGTaGGAGGTTTGTTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQSTRFL*EVCSFS
Trigger: TGAGAAGGAACAAACCTCCAACAGAAAACGGGTGGA...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTCCCTGTGCTGGTGCTaGATACGATCAAGCATGTCA +
Preference number: 5 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSSLCWC*IRSSMS
Trigger: TGACATGCTTGATCGTATCAAGCACCAGCACAGGGA...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TCCCTTTACAGATGTGAAAACAACGATCTTTGGTCCAAAGTCGCTAAGAAAATGGCATTTGATGGAGCCTaGCTCCCTGTGCTGGTGCTT +
Preference number: 5 (lower is better)
Translates to: SLYRCENNDLWSKVAKKMAFDGA*LPVLVL
Trigger: AAGCACCAGCACAGGGAGCAAGGCTCCATCAAATGC...CATTTTCTTAGCGACTTTGGACCAAAGATCGTTGTTTTCACATCTGTAAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CAA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTTCAACTGCTCCCGTTaGTCCTCCAGAAGCTTTGTG +
Preference number: 5 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSFNCSR*SSRSFV
Trigger: CACAAAGCTTCTGGAGGACAAACGGGAGCAGTTGAA...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTACTTGCTGGCTGGTGTaGTATTTGTTGAGAGAGGAT +
Preference number: 5 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTTCWLV*YLLRED
Trigger: ATCCTCTCTCAACAAATACAACACCAGCCAGCAAGT...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TGTGCTCATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGCTGAGCTTTCTTCTCTaGGGTCTGTGTCAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: CAHAHVFISEFGPGDGSMLSFLL*GLCQAL
Trigger: CAAAGCTTGACACAGACCCAAGAGAAGAAAGCTCAG...CATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATGAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR CAA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCTGCTGTTTTGCCCATaGCTCCAAGTTGGTCATAAT +
Preference number: 5 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTLLFCP*LQVGHN
Trigger: ATTATGACCAACTTGGAGCAATGGGCAAAACAGCAG...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TGTGCTCATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGTTTTCGCCACTCAGCTaGGCAATGTATTTCACCTGC +
Preference number: 5 (lower is better)
Translates to: CAHAHVFISEFGPGDGSMFSPLS*AMYFTC
Trigger: GCAGGTGAAATACATTGCCAAGCTGAGTGGCGAAAA...CATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATGAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS-3UTR CAA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAATTTTCGCCACTCAGCTaGGCAATGTATTTCACCTGC +
Preference number: 5 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQFSPLS*AMYFTC
Trigger: GCAGGTGAAATACATTGCCAAGCTGAGTGGCGAAAA...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTAGAAGGGGTCTTAATTaGCCTCCTCCCTTTACAGAT +
Preference number: 5 (lower is better)
Translates to: GDGSMVLKLTPWQEVDKTRRGLN*PPPFTD
Trigger: ATCTGTAAAGGGAGGAGGCAAATTAAGACCCCTTCT...AGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CAA 90 bp GGAAGACTTGATGCCAAAGCCCAAATAGCTTGGGGCTCCACCAGATATGAGATGCTTATTTCGAAGTTCTaGAATGAGATCATCCTGTTG +
Preference number: 5 (lower is better)
Translates to: GRLDAKAQIAWGSTRYEMLISKF*NEIILL
Trigger: CAACAGGATGATCTCATTCAAGAACTTCGAAATAAG...CATCTCATATCTGGTGGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CAA 90 bp AGGGAGGAAATGAGAGTTTTGATTCGAGGAGAAATTAACGAGGTGATTCCTCAACTTCAAAGTGAGCTTTaGGGTCTCGGTGAACTCCAG +
Preference number: 5 (lower is better)
Translates to: REEMRVLIRGEINEVIPQLQSEL*GLGELQ
Trigger: CTGGAGTTCACCGAGACCCAAAAGCTCACTTTGAAG...TTGAGGAATCACCTCGTTAATTTCTCCTCGAATCAAAACTCTCATTTCCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CAA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTCCACCCGTTTTCTGTaGGAGGTTTGTTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVSTRFL*EVCSFS
Trigger: TGAGAAGGAACAAACCTCCAACAGAAAACGGGTGGA...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GAAATGAGAGTTTTGATTCGAGGAGAAATTAACGAGGTGATTCCTCAAGGGCTGTCCACCCGTTTTCTGTaGGAGGTTTGTTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: EMRVLIRGEINEVIPQGLSTRFL*EVCSFS
Trigger: TGAGAAGGAACAAACCTCCAACAGAAAACGGGTGGA...CAGCCCTTGAGGAATCACCTCGTTAATTTCTCCTCGAATCAAAACTCTCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CAA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTTCTTCTAACTTGCATTaGATGGAGCCTTGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSSSNLH*MEPCSL
Trigger: CAGGGAGCAAGGCTCCATCAAATGCAAGTTAGAAGA...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTCTTCTAACTTGCATTaGATGGAGCCTTGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSSSNLH*MEPCSL
Trigger: CAGGGAGCAAGGCTCCATCAAATGCAAGTTAGAAGA...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TGCATCATAGGCTTCTTTGGTGATGGTAGTCTGGAGATAGTGCTTCTCCTTCTGAGATCTTCTTCTAACTaGCATTTGATGGAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: CIIGFFGDGSLEIVLLLLRSSSN*HLMEPC
Trigger: GCAAGGCTCCATCAAATGCAAGTTAGAAGAAGATCT...CAGAAGGAGAAGCACTATCTCCAGACTACCATCACCAAAGAAGCCTATGATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTAGCTTCTCATGCTCTTaGCTCTTCTTCAACTGCTCC +
Preference number: 5 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSSFSCS*LFFNCS
Trigger: GGAGCAGTTGAAGAAGAGCAAAGAGCATGAGAAGCT...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CTAAAATGTAACATTGGAAGACTTGATGCCAAAGCCCAAATAGCTTGGGGCTCCACTTGCTGGCTGGTGTaGTATTTGTTGAGAGAGGAT +
Preference number: 5 (lower is better)
Translates to: LKCNIGRLDAKAQIAWGSTCWLV*YLLRED
Trigger: ATCCTCTCTCAACAAATACAACACCAGCCAGCAAGT...GGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCCAATGTTACATTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CAA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAAACTTGCTGGCTGGTGTaGTATTTGTTGAGAGAGGAT +
Preference number: 5 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQTCWLV*YLLRED
Trigger: ATCCTCTCTCAACAAATACAACACCAGCCAGCAAGT...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACTCTTTATTCAAGTCTaGGATGACTTGCTGGCTGGT +
Preference number: 5 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQLFIQV*DDLLAG
Trigger: ACCAGCCAGCAAGTCATCCAAGACTTGAATAAAGAG...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTCTGAGCTTTCTTCTCTaGGGTCTGTGTCAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSLSFLL*GLCQAL
Trigger: CAAAGCTTGACACAGACCCAAGAGAAGAAAGCTCAG...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACTGCTGTTTTGCCCATaGCTCCAAGTTGGTCATAAT +
Preference number: 5 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQLLFCP*LQVGHN
Trigger: ATTATGACCAACTTGGAGCAATGGGCAAAACAGCAG...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCACAGACGCTGCTCCCCTaGTATCACTATGATCTGATA +
Preference number: 5 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPQTLLP*YHYDLI
Trigger: TATCAGATCATAGTGATACAAGGGGAGCAGCGTCTG...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355636.10
ENST00000379073.9
CDS-3UTR CAA 90 bp GCTCTTGAATCATGCAAGGAGAAGTGTATATCCGTACCTTTGAATGATCACCCTCAGACGCTGCTCCCCTaGTATCACTATGATCTGATA +
Preference number: 5 (lower is better)
Translates to: ALESCKEKCISVPLNDHPQTLLP*YHYDLI
Trigger: TATCAGATCATAGTGATACAAGGGGAGCAGCGTCTG...AGGGTGATCATTCAAAGGTACGGATATACACTTCTCCTTGCATGATTCAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAATCATCTTTCATTTCCTaGGCAGCTCTCAATTCTCCT +
Preference number: 5 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQSSFIS*AALNSP
Trigger: AGGAGAATTGAGAGCTGCCAAGGAAATGAAAGATGA...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTACATCGTGCAGATTCTaGATGTCAAGTTGCAGGCTT +
Preference number: 5 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSTSCRF*MSSCRL
Trigger: AAGCCTGCAACTTGACATCAAGAATCTGCACGATGT...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAACATCGTGCAGATTCTaGATGTCAAGTTGCAGGCTT +
Preference number: 5 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLTSCRF*MSSCRL
Trigger: AAGCCTGCAACTTGACATCAAGAATCTGCACGATGT...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTTCTAGTAACTCGATGTaGCTCAGGGAAGACTGGTAT +
Preference number: 5 (lower is better)
Translates to: GSKAHSMAGSGQNSTKVSSSNSM*LREDWY
Trigger: ATACCAGTCTTCCCTGAGCAACATCGAGTTACTAGA...ACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GCTCTTGAATCATGCAAGGAGAAGTGTATATCCGTACCTTTGAATGATCACCCTTCTAGTAACTCGATGTaGCTCAGGGAAGACTGGTAT +
Preference number: 5 (lower is better)
Translates to: ALESCKEKCISVPLNDHPSSNSM*LREDWY
Trigger: ATACCAGTCTTCCCTGAGCAACATCGAGTTACTAGA...AGGGTGATCATTCAAAGGTACGGATATACACTTCTCCTTGCATGATTCAAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGTGTATATCCGTACCTTaGAATGATCACCCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWCISVP*NDHPCS
Trigger: AGAACAAGGGTGATCATTCAAAGGTACGGATATACA...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCAATGAGATCATCCTGTaGAGAGACCTTTTGCCAGAC +
Preference number: 5 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVNEIIL*RDLLPD
Trigger: GTCTGGCAAAAGGTCTCTCAACAGGATGATCTCATT...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTCCTGCTTAGCCTCCTaGACTGTCATTTCAAGTTCT +
Preference number: 5 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSSCLAS*TVISSS
Trigger: AGAACTTGAAATGACAGTCAAGGAGGCTAAGCAGGA...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTCCTGCTTAGCCTCCTaGACTGTCATTTCAAGTTCT +
Preference number: 5 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVSCLAS*TVISSS
Trigger: AGAACTTGAAATGACAGTCAAGGAGGCTAAGCAGGA...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTTTTCTGTTGGAGGTTaGTTCCTTCTCAGCCATCGA +
Preference number: 5 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSFSVGG*FLLSHR
Trigger: TCGATGGCTGAGAAGGAACAAACCTCCAACAGAAAA...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTATTTTCTGTTGGAGGTTaGTTCCTTCTCAGCCATCGA +
Preference number: 5 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLFSVGG*FLLSHR
Trigger: TCGATGGCTGAGAAGGAACAAACCTCCAACAGAAAA...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TCTGAGTCTCCTGATGCTCTTGAATCATGCAAGGAGAAGTGTATATCCGTACCTAGCTGCCTCTTTTCCTaGTCTGAATTTTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: SESPDALESCKEKCISVPSCLFS*SEFSSF
Trigger: GAAGCTTGAAAATTCAGACAAGGAAAAGAGGCAGCT...AGGTACGGATATACACTTCTCCTTGCATGATTCAAGAGCATCAGGAGACTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAAAGATCTTCTTCTAACTaGCATTTGATGGAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQRSSSN*HLMEPC
Trigger: GCAAGGCTCCATCAAATGCAAGTTAGAAGAAGATCT...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TCTGAGTCTCCTGATGCTCTTGAATCATGCAAGGAGAAGTGTATATCCGTACCTCTGGTGTTGTATTTGTaGAGAGAGGATTCCAGTTGT +
Preference number: 5 (lower is better)
Translates to: SESPDALESCKEKCISVPLVLYL*REDSSC
Trigger: ACAACTGGAATCCTCTCTCAACAAATACAACACCAG...AGGTACGGATATACACTTCTCCTTGCATGATTCAAGAGCATCAGGAGACTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379073.9
CDS-3UTR CAA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCACTTGCTGGCTGGTGTaGTATTTGTTGAGAGAGGAT +
Preference number: 5 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVTCWLV*YLLRED
Trigger: ATCCTCTCTCAACAAATACAACACCAGCCAGCAAGT...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCACAAGTCTTGGATGACTaGCTGGCTGGTGTTGTATTT +
Preference number: 5 (lower is better)
Translates to: FISEFGPGDGSMVLKLTPQVLDD*LAGVVF
Trigger: AAATACAACACCAGCCAGCAAGTCATCCAAGACTTG...TGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTACAAGTCTTGGATGACTaGCTGGCTGGTGTTGTATTT +
Preference number: 5 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLQVLDD*LAGVVF
Trigger: AAATACAACACCAGCCAGCAAGTCATCCAAGACTTG...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAATTTCCTAGTTTCTCATaGGCGACCTTCTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQFPSFS*ATFCCF
Trigger: AAAACAGCAGAAGGTCGCCAATGAGAAACTAGGAAA...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAATCTTTATTTCAGAGTTaGGGCCTGGAGATGGTAGTA +
Preference number: 5 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQSLFQS*GLEMVV
Trigger: TACTACCATCTCCAGGCCCAAACTCTGAAATAAAGA...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTTCATCTTTCATTTCCTaGGCAGCTCTCAATTCTCCT +
Preference number: 5 (lower is better)
Translates to: LKLTPWQEVDKTQQKLVSSSFIS*AALNSP
Trigger: AGGAGAATTGAGAGCTGCCAAGGAAATGAAAGATGA...AGACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CTAAAATGTAACATTGGAAGACTTGATGCCAAAGCCCAAATAGCTTGGGGCTCCTGTATATCCGTACCTTaGAATGATCACCCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: LKCNIGRLDAKAQIAWGSCISVP*NDHPCS
Trigger: AGAACAAGGGTGATCATTCAAAGGTACGGATATACA...GGAGCCCCAAGCTATTTGGGCTTTGGCATCAAGTCTTCCAATGTTACATTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CAA 90 bp TATTCTGGTCTAAAATGTAACATTGGAAGACTTGATGCCAAAGCCCAAATAGCTCTGTTGAGAGACCTTTaGCCAGACTTCAGACAGTCG +
Preference number: 5 (lower is better)
Translates to: YSGLKCNIGRLDAKAQIALLRDL*PDFRQS
Trigger: CGACTGTCTGAAGTCTGGCAAAAGGTCTCTCAACAG...AGCTATTTGGGCTTTGGCATCAAGTCTTCCAATGTTACATTTTAGACCAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CAA 90 bp ATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTAAAGCTCACTCCATGGCTTATTTCGAAGTTCTaGAATGAGATCATCCTGTTG +
Preference number: 5 (lower is better)
Translates to: ISEFGPGDGSMVLKLTPWLISKF*NEIILL
Trigger: CAACAGGATGATCTCATTCAAGAACTTCGAAATAAG...CCATGGAGTGAGCTTTAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TGCATCATAGGCTTCTTTGGTGATGGTAGTCTGGAGATAGTGCTTCTCCTTCTGTGCTTCAGTATCTTTTaGATGTCTTCACACTCTTCT +
Preference number: 5 (lower is better)
Translates to: CIIGFFGDGSLEIVLLLLCFSIF*MSSHSS
Trigger: AGAAGAGTGTGAAGACATCAAAAAGATACTGAAGCA...CAGAAGGAGAAGCACTATCTCCAGACTACCATCACCAAAGAAGCCTATGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCAGCTGCCTCTTTTCCTaGTCTGAATTTTCAAGCTTC +
Preference number: 5 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVSCLFS*SEFSSF
Trigger: GAAGCTTGAAAATTCAGACAAGGAAAAGAGGCAGCT...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTTTCCTAGTTTCTCATaGGCGACCTTCTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVFPSFS*ATFCCF
Trigger: AAAACAGCAGAAGGTCGCCAATGAGAAACTAGGAAA...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TCCCTTTACAGATGTGAAAACAACGATCTTTGGTCCAAAGTCGCTAAGAAAATGTTTTCGCCACTCAGCTaGGCAATGTATTTCACCTGC +
Preference number: 5 (lower is better)
Translates to: SLYRCENNDLWSKVAKKMFSPLS*AMYFTC
Trigger: GCAGGTGAAATACATTGCCAAGCTGAGTGGCGAAAA...CATTTTCTTAGCGACTTTGGACCAAAGATCGTTGTTTTCACATCTGTAAAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CAA 90 bp GTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTGTATATCCGTACCTTaGAATGATCACCCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: VLKLTPWQEVDKTQQKLVCISVP*NDHPCS
Trigger: AGAACAAGGGTGATCATTCAAAGGTACGGATATACA...CACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CTTTTTCATCCTTTCCTCATAAGCAATGATTTCCTCTTCCAGCTGAGCTTTCTTAATGAGATCATCCTGTaGAGAGACCTTTTGCCAGAC +
Preference number: 5 (lower is better)
Translates to: LFHPFLISNDFLFQLSFLNEIIL*RDLLPD
Trigger: GTCTGGCAAAAGGTCTCTCAACAGGATGATCTCATT...AAGAAAGCTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAAGGATGAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp GATGGTAGTATGGTTCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAATGCTTCAGTATCTTTTaGATGTCTTCACACTCTTCT +
Preference number: 5 (lower is better)
Translates to: DGSMVLKLTPWQEVDKTQCFSIF*MSSHSS
Trigger: AGAAGAGTGTGAAGACATCAAAAAGATACTGAAGCA...TTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGAACCATACTACCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp CTTTTTCATCCTTTCCTCATAAGCAATGATTTCCTCTTCCAGCTGAGCTTTCTTTCCTGCTTAGCCTCCTaGACTGTCATTTCAAGTTCT +
Preference number: 5 (lower is better)
Translates to: LFHPFLISNDFLFQLSFLSCLAS*TVISSS
Trigger: AGAACTTGAAATGACAGTCAAGGAGGCTAAGCAGGA...AAGAAAGCTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAAGGATGAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp CTTTTTCATCCTTTCCTCATAAGCAATGATTTCCTCTTCCAGCTGAGCTTTCTTTTTTCTGTTGGAGGTTaGTTCCTTCTCAGCCATCGA +
Preference number: 5 (lower is better)
Translates to: LFHPFLISNDFLFQLSFLFSVGG*FLLSHR
Trigger: TCGATGGCTGAGAAGGAACAAACCTCCAACAGAAAA...AAGAAAGCTCAGCTGGAAGAGGAAATCATTGCTTATGAGGAAAGGATGAAAAAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000379073.9
ENST00000537392.1
CDS-3UTR CAA 90 bp TCCCTTTACAGATGTGAAAACAACGATCTTTGGTCCAAAGTCGCTAAGAAAATGCAAGTCTTGGATGACTaGCTGGCTGGTGTTGTATTT +
Preference number: 5 (lower is better)
Translates to: SLYRCENNDLWSKVAKKMQVLDD*LAGVVF
Trigger: AAATACAACACCAGCCAGCAAGTCATCCAAGACTTG...CATTTTCTTAGCGACTTTGGACCAAAGATCGTTGTTTTCACATCTGTAAAGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CAA 90 bp AGGGAGGAAATGAGAGTTTTGATTCGAGGAGAAATTAACGAGGTGATTCCTCAATGTATATCCGTACCTTaGAATGATCACCCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: REEMRVLIRGEINEVIPQCISVP*NDHPCS
Trigger: AGAACAAGGGTGATCATTCAAAGGTACGGATATACA...TTGAGGAATCACCTCGTTAATTTCTCCTCGAATCAAAACTCTCATTTCCTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CAA 90 bp CATGCTCATGTCTTTATTTCAGAGTTTGGGCCTGGAGATGGTAGTATGGTTCTACTTATTTCGAAGTTCTaGAATGAGATCATCCTGTTG +
Preference number: 5 (lower is better)
Translates to: HAHVFISEFGPGDGSMVLLISKF*NEIILL
Trigger: CAACAGGATGATCTCATTCAAGAACTTCGAAATAAG...TAGAACCATACTACCATCTCCAGGCCCAAACTCTGAAATAAAGACATGAGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TCTAAAGCTCACTCCATGGCAGGAAGTGGACAAAACTCAACAAAAGTTAGTGTCTGCTTCAGTATCTTTTaGATGTCTTCACACTCTTCT +
Preference number: 5 (lower is better)
Translates to: SKAHSMAGSGQNSTKVSVCFSIF*MSSHSS
Trigger: AGAAGAGTGTGAAGACATCAAAAAGATACTGAAGCA...GACACTAACTTTTGTTGAGTTTTGTCCACTTCCTGCCATGGAGTGAGCTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000537465.5
CDS-3UTR CAA 90 bp TCCCTTTACAGATGTGAAAACAACGATCTTTGGTCCAAAGTCGCTAAGAAAATGTTTCCTAGTTTCTCATaGGCGACCTTCTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: SLYRCENNDLWSKVAKKMFPSFS*ATFCCF
Trigger: AAAACAGCAGAAGGTCGCCAATGAGAAACTAGGAAA...CATTTTCTTAGCGACTTTGGACCAAAGATCGTTGTTTTCACATCTGTAAAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS-3UTR CAA 90 bp TATTCTGGTCTAAAATGTAACATTGGAAGACTTGATGCCAAAGCCCAAATAGCTAGATCTTCTTCTAACTaGCATTTGATGGAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: YSGLKCNIGRLDAKAQIARSSSN*HLMEPC
Trigger: GCAAGGCTCCATCAAATGCAAGTTAGAAGAAGATCT...AGCTATTTGGGCTTTGGCATCAAGTCTTCCAATGTTACATTTTAGACCAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS-3UTR CAA 90 bp AGGGAGGAAATGAGAGTTTTGATTCGAGGAGAAATTAACGAGGTGATTCCTCAAGAGGAAATGAGAGTTTaGATTCGAGGAGAAATTAAC +
Preference number: 5 (lower is better)
Translates to: REEMRVLIRGEINEVIPQEEMRV*IRGEIN
Trigger: GTTAATTTCTCCTCGAATCAAAACTCTCATTTCCTC...TTGAGGAATCACCTCGTTAATTTCTCCTCGAATCAAAACTCTCATTTCCTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS TCA 72 bp ACGTACCCGGGCAGTGGGGCATCCCGATGTACTTGGTaGGGTCCATTCTTTGACCCATATCCTGGGGCAACC +
Preference number: 6 (lower is better)
Translates to: TYPGSGASRCTW*GPFFDPYPGAT
Trigger: GGTTGCCCCAGGATATGGGTCAAAGAATGGACCTCACCAAGTACATCGGGATGCCCCACTGCCCGGGTACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537465.5
CDS GCA 72 bp GCTTCTTGTCGTGGCTGCTGTTCATTGCCTCCTCCATaGAGAGCTGATTGTCCTGCAAGGTCTTCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: ASCRGCCSLPPP*RADCPARSSSV
Trigger: GACAGAGGAAGACCTTGCAGGACAATCAGCTCTGCATGGAGGAGGCAATGAACAGCAGCCACGACAAGAAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237353.15
ENST00000535461.5
ENST00000536211.5
ENST00000537465.5
ENST00000539172.5
CDS GCA 72 bp TGCCTGTGCTTGCTTCTTGTCGTGGCTGCTGTTCATTaGCTCCTCCATGCAGAGCTGATTGTCCTGCAAGGT +
Preference number: 6 (lower is better)
Translates to: CLCLLLVVAAVH*LLHAELIVLQG
Trigger: ACCTTGCAGGACAATCAGCTCTGCATGGAGGAGGCAATGAACAGCAGCCACGACAAGAAGCAAGCACAGGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237353.15
ENST00000535461.5
ENST00000536211.5
ENST00000537465.5
ENST00000539172.5
CDS CAA 72 bp ATGCCTGTGCTTGCTTCTTGTCGTGGCTGCTGTTCATaGCCTCCTCCATGCAGAGCTGATTGTCCTGCAAGG +
Preference number: 6 (lower is better)
Translates to: MPVLASCRGCCS*PPPCRADCPAR
Trigger: CCTTGCAGGACAATCAGCTCTGCATGGAGGAGGCAATGAACAGCAGCCACGACAAGAAGCAAGCACAGGCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000237353.15
ENST00000535461.5
ENST00000536211.5
ENST00000537465.5
ENST00000539172.5
CDS GCA 72 bp GCCTCTTGCGTCTCTGTTGAGACCTTCATTTCTTCATaGCTTGTCTACTGCCATCTGCCCAGGCAACTCCTT +
Preference number: 6 (lower is better)
Translates to: ASCVSVETFISS*LVYCHLPRQLL
Trigger: AAGGAGTTGCCTGGGCAGATGGCAGTAGACAAGGCATGAAGAAATGAAGGTCTCAACAGAGACGCAAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540440.1
CDS CCA 72 bp TTACACTGTGGAGGTGGTCCTTTTCGCCACTCAGCTTaGCAATGTATTTCACCTGCTCTCGGAGCTGGTTTC +
Preference number: 6 (lower is better)
Translates to: LHCGGGPFRHSA*QCISPALGAGF
Trigger: GAAACCAGCTCCGAGAGCAGGTGAAATACATTGCCAAGCTGAGTGGCGAAAAGGACCACCTCCACAGTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS CAA 90 bp TCCTGCAAGGTCTTCCTCTGTCTCTTGCAGACATCGTGCAGATTCTaGATGTCAAGTTGCAGGCTTAACAGCTTGCTGTTCAGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: SCKVFLCLLQTSCRF*MSSCRLNSLLFRLL
Trigger: GAGCAGCCTGAACAGCAAGCTGTTAAGCCTGCAACTTGACATCAAGAATCTGCACGATGTCTGCAAGAGACAGAGGAAGACCTTGCAGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000535461.5
ENST00000536211.5
ENST00000537465.5
ENST00000539172.5
ENST00000540440.1
ENST00000543746.1
CDS CAA 72 bp ATTACACTGTGGAGGTGGTCCTTTTCGCCACTCAGCTaGGCAATGTATTTCACCTGCTCTCGGAGCTGGTTT +
Preference number: 6 (lower is better)
Translates to: ITLWRWSFSPLS*AMYFTCSRSWF
Trigger: AAACCAGCTCCGAGAGCAGGTGAAATACATTGCCAAGCTGAGTGGCGAAAAGGACCACCTCCACAGTGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237353.15
ENST00000537465.5
CDS TCA 72 bp AGTAGAGCTGTAGGTGGCCCAGGATCCGCAGTTGGCTaGGCAGTTAGCTGCATTTCTCTTTATTCAAGTCTT +
Preference number: 6 (lower is better)
Translates to: SRAVGGPGSAVG*AVSCISLYSSL
Trigger: AAGACTTGAATAAAGAGAAATGCAGCTAACTGCTCAGCCAACTGCGGATCCTGGGCCACCTACAGCTCTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS GCA 72 bp TCCTGCAAGGTCTTCCTCTGTCTCTTGCAGACATCGTaGAGATTCTTGATGTCAAGTTGCAGGCTTAACAGC +
Preference number: 6 (lower is better)
Translates to: SCKVFLCLLQTS*RFLMSSCRLNS
Trigger: GCTGTTAAGCCTGCAACTTGACATCAAGAATCTGCACGATGTCTGCAAGAGACAGAGGAAGACCTTGCAGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000535461.5
ENST00000536211.5
ENST00000537465.5
ENST00000539172.5
ENST00000540440.1
ENST00000543746.1
CDS CCA 72 bp TCAGTTGCTGGAGTTGTCTCAGATGACACTGTTTACTaGACCCAAATTCCACCTCTGACTCCTCGAATGCTA +
Preference number: 6 (lower is better)
Translates to: SVAGVVSDDTVY*TQIPPLTPRML
Trigger: TAGCATTCGAGGAGTCAGAGGTGGAATTTGGGTCCAGTAAACAGTGTCATCTGAGACAACTCCAGCAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000535461.5
ENST00000537465.5
ENST00000539172.5
ENST00000543746.1
CDS TCA 72 bp TCTTCCTCTGTCTCTTGCAGACATCGTGCAGATTCTTaGTGTCAAGTTGCAGGCTTAACAGCTTGCTGTTCA +
Preference number: 6 (lower is better)
Translates to: SSSVSCRHRADS*CQVAGLTACCS
Trigger: TGAACAGCAAGCTGTTAAGCCTGCAACTTGACATCAAGAATCTGCACGATGTCTGCAAGAGACAGAGGAAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000237353.15
ENST00000355636.10
ENST00000379073.9
ENST00000535461.5
ENST00000536211.5
ENST00000537465.5
ENST00000539172.5
ENST00000540440.1
ENST00000543746.1
CDS CAA 90 bp GCTGAGCAGTTAGCTGCATTTCTCTTTATTCAAGTCTTGGATGACTaGCTGGCTGGTGTTGTATTTGTTGAGAGAGGATTCCAGTTGTGT +
Preference number: 6 (lower is better)
Translates to: AEQLAAFLFIQVLDD*LAGVVFVERGFQLC
Trigger: ACACAACTGGAATCCTCTCTCAACAAATACAACACCAGCCAGCAAGTCATCCAAGACTTGAATAAAGAGAAATGCAGCTAACTGCTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS CAA 72 bp GCTGAGCAGTTAGCTGCATTTCTCTTTATTCAAGTCTaGGATGACTTGCTGGCTGGTGTTGTATTTGTTGAG +
Preference number: 6 (lower is better)
Translates to: AEQLAAFLFIQV*DDLLAGVVFVE
Trigger: CTCAACAAATACAACACCAGCCAGCAAGTCATCCAAGACTTGAATAAAGAGAAATGCAGCTAACTGCTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS CCA 72 bp CTGCATTTCTCTTTATTCAAGTCTTGGATGACTTGCTaGCTGGTGTTGTATTTGTTGAGAGAGGATTCCAGT +
Preference number: 6 (lower is better)
Translates to: LHFSLFKSWMTC*LVLYLLREDSS
Trigger: ACTGGAATCCTCTCTCAACAAATACAACACCAGCCAGCAAGTCATCCAAGACTTGAATAAAGAGAAATGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS CAA 90 bp TTCTCTTTATTCAAGTCTTGGATGACTTGCTGGCTGGTGTTGTATTaGTTGAGAGAGGATTCCAGTTGTGTAGAACAACACTGTAGCTCT +
Preference number: 6 (lower is better)
Translates to: FSLFKSWMTCWLVLY*LREDSSCVEQHCSS
Trigger: AGAGCTACAGTGTTGTTCTACACAACTGGAATCCTCTCTCAACAAATACAACACCAGCCAGCAAGTCATCCAAGACTTGAATAAAGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS CAA 90 bp CTGCATTTCTCTTTATTCAAGTCTTGGATGACTTGCTGGCTGGTGTaGTATTTGTTGAGAGAGGATTCCAGTTGTGTAGAACAACACTGT +
Preference number: 6 (lower is better)
Translates to: LHFSLFKSWMTCWLV*YLLREDSSCVEQHC
Trigger: ACAGTGTTGTTCTACACAACTGGAATCCTCTCTCAACAAATACAACACCAGCCAGCAAGTCATCCAAGACTTGAATAAAGAGAAATGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537392.1
CDS CAA 72 bp TTAGCTGCATTTCTCTTTATTCAAGTCTTGGATGACTaGCTGGCTGGTGTTGTATTTGTTGAGAGAGGATTC +
Preference number: 6 (lower is better)
Translates to: LAAFLFIQVLDD*LAGVVFVERGF
Trigger: GAATCCTCTCTCAACAAATACAACACCAGCCAGCAAGTCATCCAAGACTTGAATAAAGAGAAATGCAGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537392.1