RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PMEPA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000124225

Ensembl transcript IDs: ENST00000265626.8, ENST00000341744.8, ENST00000347215.8, ENST00000395814.5, ENST00000395816.7, ENST00000395819.3, ENST00000414037.5, ENST00000472841.1

Found 772 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCACTCTGCAGGGACAGTGGCCCCTCGGGAAAGCCCGCCGCTCCTaGCCAAGGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCC +
Preference number: 1 (lower is better)
Translates to: STLQGQWPLGKARRS*PRPLCRLHGGSPSA
Trigger: GGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCCTTGGCCAGGAGCGGCGGGCTTTCCCGAGGGGCCACTGTCCCTGCAGAGTGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 90 bp GGAGCCCTTGGTGGACCCTGGGAGGGGATACCAGTCCCAGGTGAGTaGGGCACTGTCCGGGAACGTCCTCACCGAGCGACGGGAGTGTCA +
Preference number: 1 (lower is better)
Translates to: GALGGPWEGIPVPGE*GTVRERPHRATGVS
Trigger: TGACACTCCCGTCGCTCGGTGAGGACGTTCCCGGACAGTGCCTCACTCACCTGGGACTGGTATCCCCTCCCAGGGTCCACCAAGGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 90 bp AGCAGGAGCCCTTGGTGGACCCTGGGAGGGGATACCAGTCCCAGGTaGGTGAGGCACTGTCCGGGAACGTCCTCACCGAGCGACGGGAGT +
Preference number: 1 (lower is better)
Translates to: SRSPWWTLGGDTSPR*VRHCPGTSSPSDGS
Trigger: ACTCCCGTCGCTCGGTGAGGACGTTCCCGGACAGTGCCTCACTCACCTGGGACTGGTATCCCCTCCCAGGGTCCACCAAGGGCTCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 90 bp GCGGCAGTTACCGCACCTGCCTTCACCGGTGAACCTTTAGCCAGCTaGACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCT +
Preference number: 1 (lower is better)
Translates to: AAVTAPAFTGEPLAS*TTTKAPCRDKSSSP
Trigger: AGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGCTGGCTAAAGGTTCACCGGTGAAGGCAGGTGCGGTAACTGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 90 bp CTTCCTAGGGTCCAGTGCGGCAGTTACCGCACCTGCCTTCACCGGTaGACCTTTAGCCAGCTGAACAACCACCAAAGCGCCCTGCAGAGA +
Preference number: 1 (lower is better)
Translates to: LPRVQCGSYRTCLHR*TFSQLNNHQSALQR
Trigger: TCTCTGCAGGGCGCTTTGGTGGTTGTTCAGCTGGCTAAAGGTTCACCGGTGAAGGCAGGTGCGGTAACTGCCGCACTGGACCCTAGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 90 bp AGGAGTAACCTCACCAAGCTAGGCACCTCCCTGGTAGAGACAGGGTaGGGACGCGCGAGGATGATGGGGTGTCTGAAAAGCAGGAGCCCT +
Preference number: 1 (lower is better)
Translates to: RSNLTKLGTSLVETG*GRARMMGCLKSRSP
Trigger: AGGGCTCCTGCTTTTCAGACACCCCATCATCCTCGCGCGTCCTCACCCTGTCTCTACCAGGGAGGTGCCTAGCTTGGTGAGGTTACTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR GCA 90 bp CTCCTGGCCAAGGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTaGCGTCAGGCGACTCTGAAATTCCGACATTTCTCCCTTAAAGTC +
Preference number: 1 (lower is better)
Translates to: LLAKASLQTPRGLTL*RQATLKFRHFSLKV
Trigger: GACTTTAAGGGAGAAATGTCGGAATTTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCCTTGGCCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 90 bp AGGGAGACAGTGACAAGGCTAGAGAAAGCCACGCTCGGCCTTCTCTaGACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCC +
Preference number: 1 (lower is better)
Translates to: RETVTRLEKATLGLL*TRMERQTPETKLVP
Trigger: GGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTCAGAGAAGGCCGAGCGTGGCTTTCTCTAGCCTTGTCACTGTCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CCA 90 bp ATCCGTGAAGGGAAACAGACAGGAGGAGGTCAGATTGCGAATACCTaGGGCTTCCTAGGGTCCAGTGCGGCAGTTACCGCACCTGCCTTC +
Preference number: 1 (lower is better)
Translates to: IREGKQTGGGQIANT*GFLGSSAAVTAPAF
Trigger: GAAGGCAGGTGCGGTAACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCTGTCTGTTTCCCTTCACGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 90 bp CTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTaGGTTGTCATGAGAGGGACAGGCTCTGTCCTCAAGCCGGCTGAG +
Preference number: 1 (lower is better)
Translates to: LPSTGHEAEDTGLQH*VVMRGTGSVLKPAE
Trigger: CTCAGCCGGCTTGAGGACAGAGCCTGTCCCTCTCATGACAACTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR GCA 90 bp GAGGCACTGTCCGGGAACGTCCTCACCGAGCGACGGGAGTGTCACTaGTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAAAGA +
Preference number: 1 (lower is better)
Translates to: EALSGNVLTERRECH*FFSKALETRHIKER
Trigger: TCTTTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCGTCGCTCGGTGAGGACGTTCCCGGACAGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR GCA 90 bp TTGGGATGCGCCCAGCCTTTGAGAGGCCACTACCCCATGAACTTCTaGCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACT +
Preference number: 1 (lower is better)
Translates to: LGCAQPLRGHYPMNF*HPLDMKLRTLGFNT
Trigger: AGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTTCATGGGGTAGTGGCCTCTCAAAGGCTGGGCGCATCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CCA 90 bp CCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTaGGTGCGCGCCCCGCATGCCACGGAAAGCTTACATAAGTTTAAC +
Preference number: 1 (lower is better)
Translates to: PVDWHPNTESYAAGT*VRAPHATESLHKFN
Trigger: GTTAAACTTATGTAAGCTTTCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 90 bp CTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTaGAATTCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAG +
Preference number: 1 (lower is better)
Translates to: LCRLHGGSPSAVRRL*NSDISPLKSQQTQE
Trigger: CTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGAATTTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 90 bp GGGTGCGCGCCCCGCATGCCACGGAAAGCTTACATAAGTTTAACTTaGACAGAGCTTGGGAAATGGGGCTGCAAAGGAGAGCAGTTCCCA +
Preference number: 1 (lower is better)
Translates to: GCAPRMPRKAYISLT*TELGKWGCKGEQFP
Trigger: TGGGAACTGCTCTCCTTTGCAGCCCCATTTCCCAAGCTCTGTTCAAGTTAAACTTATGTAAGCTTTCCGTGGCATGCGGGGCGCGCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR GCA 90 bp TTAACTCTGGTCGTTTCCAGAGACAACCTGCTGGCTGTCTTGGGATaGGCCCAGCCTTTGAGAGGCCACTACCCCATGAACTTCTGCCAT +
Preference number: 1 (lower is better)
Translates to: LTLVVSRDNLLAVLG*AQPLRGHYPMNFCH
Trigger: ATGGCAGAAGTTCATGGGGTAGTGGCCTCTCAAAGGCTGGGCGCATCCCAAGACAGCCAGCAGGTTGTCTCTGGAAACGACCAGAGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 90 bp AAATGGGGCTGCAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTaGAAGCATTGGAATCAGCACAACAGCCATGGAATCAGGCAGGCA +
Preference number: 1 (lower is better)
Translates to: KWGCKGEQFPRQEPT*KHWNQHNSHGIRQA
Trigger: TGCCTGCCTGATTCCATGGCTGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTGCAGCCCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CCA 90 bp CCACTAATGATTACTGATACACAACAAGCAGTTTCTTCAGGCCTGTaGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGG +
Preference number: 1 (lower is better)
Translates to: PLMITDTQQAVSSGL*IGIQIQSLTQRGRG
Trigger: CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGAAGAAACTGCTTGTTGTGTATCAGTAATCATTAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 90 bp ACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACATGCATaGGCTCGAGTGGCTAGAACTTCAAAACTGTGCTCAGGTTTTTGT +
Preference number: 1 (lower is better)
Translates to: TSVSCHLRKAHVSHA*ARVARTSKLCSGFC
Trigger: ACAAAAACCTGAGCACAGTTTTGAAGTTCTAGCCACTCGAGCTCATGCATGTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR GCA 90 bp GAAGAGAAGGTGAAGAATTCTGCGCCCGAAGCTCGGGTTGGTGTTTaGTCAACTGCTTTACTCATTTTAACCCTTTCACCTATCCTGGGA +
Preference number: 1 (lower is better)
Translates to: EEKVKNSAPEARVGV*STALLILTLSPILG
Trigger: TCCCAGGATAGGTGAAAGGGTTAAAATGAGTAAAGCAGTTGAGCAAACACCAACCCGAGCTTCGGGCGCAGAATTCTTCACCTTCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CCA 90 bp GAAAGGGGAAGAGAAGGTGAAGAATTCTGCGCCCGAAGCTCGGGTTaGTGTTTGCTCAACTGCTTTACTCATTTTAACCCTTTCACCTAT +
Preference number: 1 (lower is better)
Translates to: ERGREGEEFCARSSG*CLLNCFTHFNPFTY
Trigger: ATAGGTGAAAGGGTTAAAATGAGTAAAGCAGTTGAGCAAACACCAACCCGAGCTTCGGGCGCAGAATTCTTCACCTTCTCTTCCCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 90 bp AGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGTaGGAATTGATCCGTGAAGGGAAACAGACAGGAGGAGGTCAGATT +
Preference number: 1 (lower is better)
Translates to: RLVTFSCWVVYWPLK*ELIREGKQTGGGQI
Trigger: AATCTGACCTCCTCCTGTCTGTTTCCCTTCACGGATCAATTCTCACTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 90 bp GACCTTTTCAAAGAATCCTCTTCAAGAGAGAAACAAATTTTAGGCTaGCGACTTCACGGAGAGGCAGGTTCTGCTGTTGCCAATGAACGA +
Preference number: 1 (lower is better)
Translates to: DLFKESSSREKQILG*RLHGEAGSAVANER
Trigger: TCGTTCATTGGCAACAGCAGAACCTGCCTCTCCGTGAAGTCGTCAGCCTAAAATTTGTTTCTCTCTTGAAGAGGATTCTTTGAAAAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 90 bp AGTATTGCAGCTTTTCAGAATGTCATCATTGCCACTAATGATTACTaGTACACAACAAGCAGTTTCTTCAGGCCTGTGGATTGGCATCCA +
Preference number: 1 (lower is better)
Translates to: SIAAFQNVIIATNDY*YTTSSFFRPVDWHP
Trigger: TGGATGCCAATCCACAGGCCTGAAGAAACTGCTTGTTGTGTATCAGTAATCATTAGTGGCAATGATGACATTCTGAAAAGCTGCAATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGACGGGGGCTCACCCTCTaGCGTCAGGCGACTCTGAAA +
Preference number: 2 (lower is better)
Translates to: KYRVLRSGDVGARPACHGRGLTL*RQATLK
Trigger: TTTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCG...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGATCAAGCTCCAGCCACTaGCCCCGGTGGGTCCCAAAG +
Preference number: 2 (lower is better)
Translates to: KYRVLRSGDVGARPACHGSSSSH*PRWVPK
Trigger: CTTTGGGACCCACCGGGGCCAGTGGCTGGAGCTTGA...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAACGCTCGGCCTTCTCTaGACCAGGATGGAACGGCAG +
Preference number: 2 (lower is better)
Translates to: KYRVLRSGDVGARPACHGTLGLL*TRMERQ
Trigger: CTGCCGTTCCATCCTGGTTCAGAGAAGGCCGAGCGT...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCTGGCCAAGGCCTCTCTaGAGACTCCACGGGGGCTCA +
Preference number: 2 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIWPRPL*RLHGGS
Trigger: TGAGCCCCCGTGGAGTCTGCAGAGAGGCCTTGGCCA...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAAGTCATCGAGCCCTCTaGCATGTCCCTGGTAGCCCG +
Preference number: 2 (lower is better)
Translates to: KYRVLRSGDVGARPACHGSHRAL*HVPGSP
Trigger: CGGGCTACCAGGGACATGCCAGAGGGCTCGATGACT...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACAGCCACTGGCCCCGGTaGGTCCCAAAGCCCCACCCC +
Preference number: 2 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHSHWPR*VPKPHP
Trigger: GGGGTGGGGCTTTGGGACCCACCGGGGCCAGTGGCT...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAGGAGGGGGTAGCAGCTaGGAGTCTGCTCTTCCAGCT +
Preference number: 2 (lower is better)
Translates to: KYRVLRSGDVGARPACHGGGGSS*ESALPA
Trigger: AGCTGGAAGAGCAGACTCCCAGCTGCTACCCCCTCC...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp CAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCCCTGGTAGCCCGGGGGCTCACCCTCTaGCGTCAGGCGACTCTGAAA +
Preference number: 2 (lower is better)
Translates to: QSALQRQVIEPSGMSLVARGLTL*RQATLK
Trigger: TTTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCG...GGCTACCAGGGACATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCTGGCCAAGGCCTCTCTaGAGACTCCACGGGGGCTCA +
Preference number: 2 (lower is better)
Translates to: VDWHPNTESYAAGTWVRAWPRPL*RLHGGS
Trigger: TGAGCCCCCGTGGAGTCTGCAGAGAGGCCTTGGCCA...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCCTTCCTAGGGTCCAGTaGGGCAGTTACCGCACCTGC +
Preference number: 2 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQILPRVQ*GSYRTC
Trigger: GCAGGTGCGGTAACTGCCGCACTGGACCCTAGGAAG...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGATTCCTGTCCTTCACCTaGACGTCACCAGCAGGTCCC +
Preference number: 2 (lower is better)
Translates to: KYRVLRSGDVGARPACHGFLSFT*TSPAGP
Trigger: GGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAA...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAGCTCTCCCCCAGCCCTaGTTTTTGCTACATATGGGG +
Preference number: 2 (lower is better)
Translates to: KYRVLRSGDVGARPACHGALPQP*FLLHMG
Trigger: CCCCATATGTAGCAAAAATCAGGGCTGGGGGAGAGC...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTCGGGGGCTCACCCTCTaGCGTCAGGCGACTCTGAAA +
Preference number: 2 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSRGLTL*RQATLK
Trigger: TTTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCG...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCTGGCTGTCTTGGGATaGGCCCAGCCTTTGAGAGGC +
Preference number: 2 (lower is better)
Translates to: VDWHPNTESYAAGTWVRALAVLG*AQPLRG
Trigger: GCCTCTCAAAGGCTGGGCGCATCCCAAGACAGCCAG...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTAAAGCCCGCCGCTCCTaGCCAAGGCCTCTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSKARRS*PRPLCR
Trigger: TCTGCAGAGAGGCCTTGGCCAGGAGCGGCGGGCTTT...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATACTCTGCAGGGACAGTaGCCCCTCGGGAAAGCCCGC +
Preference number: 2 (lower is better)
Translates to: AEQPPKRPAETSHRALWHTLQGQ*PLGKAR
Trigger: GCGGGCTTTCCCGAGGGGCCACTGTCCCTGCAGAGT...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAGTCTCAGCCTGGCTTTaGGCTGACACCATGCACACA +
Preference number: 2 (lower is better)
Translates to: KYRVLRSGDVGARPACHGVSAWL*ADTMHT
Trigger: TGTGTGCATGGTGTCAGCCCAAAGCCAGGCTGAGAC...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACAAAGCCCGCCGCTCCTaGCCAAGGCCTCTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHKARRS*PRPLCR
Trigger: TCTGCAGAGAGGCCTTGGCCAGGAGCGGCGGGCTTT...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp CAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCCCTGGTAGCCGGCAAAACCACTACCTaGAACTCGGTGCCTCCGTGG +
Preference number: 2 (lower is better)
Translates to: QSALQRQVIEPSGMSLVAGKTTT*NSVPPW
Trigger: CCACGGAGGCACCGAGTTCCAGGTAGTGGTTTTGCC...GGCTACCAGGGACATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCGGCAAAACCACTACCTaGAACTCGGTGCCTCCGTGG +
Preference number: 2 (lower is better)
Translates to: VDWHPNTESYAAGTWVRAGKTTT*NSVPPW
Trigger: CCACGGAGGCACCGAGTTCCAGGTAGTGGTTTTGCC...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGACAGATTGCGAATACCTaGGGCTTCCTAGGGTCCAGT +
Preference number: 2 (lower is better)
Translates to: KYRVLRSGDVGARPACHGQIANT*GFLGSS
Trigger: ACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTG...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTCAAGCTCCAGCCACTaGCCCCGGTGGGTCCCAAAG +
Preference number: 2 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGSSSSH*PRWVPK
Trigger: CTTTGGGACCCACCGGGGCCAGTGGCTGGAGCTTGA...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCGAACCTTTAGCCAGCTaGACAACCACCAAAGCGCCC +
Preference number: 2 (lower is better)
Translates to: VDWHPNTESYAAGTWVRAEPLAS*TTTKAP
Trigger: GGGCGCTTTGGTGGTTGTTCAGCTGGCTAAAGGTTC...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGCCAGTCCCAGGTGAGTaGGGCACTGTCCGGGAACGT +
Preference number: 2 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQPVPGE*GTVRER
Trigger: ACGTTCCCGGACAGTGCCTCACTCACCTGGGACTGG...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGGATACCAGTCCCAGGTaGGTGAGGCACTGTCCGGGA +
Preference number: 2 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGDTSPR*VRHCPG
Trigger: TCCCGGACAGTGCCTCACTCACCTGGGACTGGTATC...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCTGGCTCAAGAGGATATaGGGACTGTCTCAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: VDWHPNTESYAAGTWVRAWLKRI*GLSQPG
Trigger: GCCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCA...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGTGGCCAAGGCCTCTCTaGAGACTCCACGGGGGCTCA +
Preference number: 2 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQWPRPL*RLHGGS
Trigger: TGAGCCCCCGTGGAGTCTGCAGAGAGGCCTTGGCCA...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATCAGAAGCATCCACTCTaGAGGGACAGTGGCCCCTCG +
Preference number: 2 (lower is better)
Translates to: AEQPPKRPAETSHRALWHQKHPL*RDSGPS
Trigger: CGAGGGGCCACTGTCCCTGCAGAGTGGATGCTTCTG...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGATTTGGGCTGACACCATaGACACACACAAGGTCCACT +
Preference number: 2 (lower is better)
Translates to: KYRVLRSGDVGARPACHGFGLTP*THTRST
Trigger: AGTGGACCTTGTGTGTGTGCATGGTGTCAGCCCAAA...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAGCATTCTGCCCAAAATaGAAAGCCACTCCCATGGGA +
Preference number: 2 (lower is better)
Translates to: KYRVLRSGDVGARPACHGAFCPK*KATPMG
Trigger: TCCCATGGGAGTGGCTTTCCATTTTGGGCAGAATGC...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTGCCGTCAGGCGACTCTaGAATTCCGACATTTCTCCC +
Preference number: 2 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSAVRRL*NSDISP
Trigger: GGGAGAAATGTCGGAATTTCAGAGTCGCCTGACGGC...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCGTGAGAATTGATCCGTaGAGGGAAACAGACAGGAGG +
Preference number: 2 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIVRIDP*RETDRR
Trigger: CCTCCTGTCTGTTTCCCTTCACGGATCAATTCTCAC...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGCTGGTAGAGACAGGGTaGGGACGCGCGAGGATGATG +
Preference number: 2 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQLVETG*GRARMM
Trigger: CATCATCCTCGCGCGTCCTCACCCTGTCTCTACCAG...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGGGAACGGCAGACCCCTaGAACGAAGCTTGTCCCCTT +
Preference number: 2 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGGTADP*NEACPL
Trigger: AAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCC...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAAAACACTGGGCTTTCTaGGAACACGGACGGTTCTTA +
Preference number: 2 (lower is better)
Translates to: KYRVLRSGDVGARPACHGKHWAF*EHGRFL
Trigger: TAAGAACCGTCCGTGTTCTCAGAAAGCCCAGTGTTT...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCGCCAGGAACCAACGTaGAAGCATTGGAATCAGCAC +
Preference number: 2 (lower is better)
Translates to: VDWHPNTESYAAGTWVRARQEPT*KHWNQH
Trigger: GTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCG...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTAAGCGCGGAGTGTTCTaGCTTTTCACCTACGCAGCC +
Preference number: 2 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSKRGVF*LFTYAA
Trigger: GGCTGCGTAGGTGAAAAGGCAGAACACTCCGCGCTT...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGAAGCCCCACCCCTCATaGTCTCCTCTGGTCACCTCT +
Preference number: 2 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGKPHPS*SPLVTS
Trigger: AGAGGTGACCAGAGGAGAGCATGAGGGGTGGGGCTT...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGACTCTGCAGGGACAGTaGCCCCTCGGGAAAGCCCGC +
Preference number: 2 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTETLQGQ*PLGKAR
Trigger: GCGGGCTTTCCCGAGGGGCCACTGTCCCTGCAGAGT...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CAA 90 bp GTTTCCAGAGACAACCTGCTGGCTGTCTTGGGATGCGCCCAGCCTTaGAGAGGCCACTACCCCATGAACTTCTGCCATCCACTGGACATG +
Preference number: 2 (lower is better)
Translates to: VSRDNLLAVLGCAQP*RGHYPMNFCHPLDM
Trigger: CATGTCCAGTGGATGGCAGAAGTTCATGGGGTAGTGGCCTCTCAAAGGCTGGGCGCATCCCAAGACAGCCAGCAGGTTGTCTCTGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGACCTGCCTTCACCGGTaGACCTTTAGCCAGCTGAAC +
Preference number: 2 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGTCLHR*TFSQLN
Trigger: GTTCAGCTGGCTAAAGGTTCACCGGTGAAGGCAGGT...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGATATTGGCCTCTTAAGTaGGAATTGATCCGTGAAGGG +
Preference number: 2 (lower is better)
Translates to: KYRVLRSGDVGARPACHGYWPLK*ELIREG
Trigger: CCCTTCACGGATCAATTCTCACTTAAGAGGCCAATA...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACACCAGTCCCAGGTGAGTaGGGCACTGTCCGGGAACGT +
Preference number: 2 (lower is better)
Translates to: ESSSHARNQRESIGISTTPVPGE*GTVRER
Trigger: ACGTTCCCGGACAGTGCCTCACTCACCTGGGACTGG...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACATGTCCTCAAGCCGGCTaGGGGCAGCAACCACTCTCC +
Preference number: 2 (lower is better)
Translates to: ESSSHARNQRESIGISTTCPQAG*GQQPLS
Trigger: GGAGAGTGGTTGCTGCCCTCAGCCGGCTTGAGGACA...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGGAGGCCACTACCCCATaGACTTCTGCCATCCACTGG +
Preference number: 2 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQEATTP*TSAIHW
Trigger: CCAGTGGATGGCAGAAGTTCATGGGGTAGTGGCCTC...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGACCACCAAAGCGCCCTaGAGAGACAAGTCATCGAGC +
Preference number: 2 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGTTKAP*RDKSSS
Trigger: GCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGT...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAGCTCGGGTTGGTGTTTaGTCAACTGCTTTACTCATT +
Preference number: 2 (lower is better)
Translates to: KYRVLRSGDVGARPACHGARVGV*STALLI
Trigger: AATGAGTAAAGCAGTTGAGCAAACACCAACCCGAGC...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACGAAGGTGAAGAATTCTaGGCCCGAAGCTCGGGTTGG +
Preference number: 2 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHEGEEF*ARSSGW
Trigger: CCAACCCGAGCTTCGGGCGCAGAATTCTTCACCTTC...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGGAAGGTGAAGAATTCTaGGCCCGAAGCTCGGGTTGG +
Preference number: 2 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGEGEEF*ARSSGW
Trigger: CCAACCCGAGCTTCGGGCGCAGAATTCTTCACCTTC...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGTTCCTGTCCTTCACCTaGACGTCACCAGCAGGTCCC +
Preference number: 2 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQFLSFT*TSPAGP
Trigger: GGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAA...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCGACGGGAGTGTCACTaGTTCTTCAGTAAGGCACTA +
Preference number: 2 (lower is better)
Translates to: VDWHPNTESYAAGTWVRARRECH*FFSKAL
Trigger: TAGTGCCTTACTGAAGAAGCAGTGACACTCCCGTCG...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGAAGCCACTGGCCCCGGTaGGTCCCAAAGCCCCACCCC +
Preference number: 2 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGSHWPR*VPKPHP
Trigger: GGGGTGGGGCTTTGGGACCCACCGGGGCCAGTGGCT...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAAGCAGGAGCCCTTGGTaGACCCTGGGAGGGGATACC +
Preference number: 2 (lower is better)
Translates to: ESSSHARNQRESIGISTTSRSPW*TLGGDT
Trigger: GGTATCCCCTCCCAGGGTCCACCAAGGGCTCCTGCT...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CAA 90 bp GAGAGCTTAACTCTGGTCGTTTCCAGAGACAACCTGCTGGCTGTCTaGGGATGCGCCCAGCCTTTGAGAGGCCACTACCCCATGAACTTC +
Preference number: 2 (lower is better)
Translates to: ESLTLVVSRDNLLAV*GCAQPLRGHYPMNF
Trigger: GAAGTTCATGGGGTAGTGGCCTCTCAAAGGCTGGGCGCATCCCAAGACAGCCAGCAGGTTGTCTCTGGAAACGACCAGAGTTAAGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CAA 90 bp CTGCAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATaGGAATCAGCACAACAGCCATGGAATCAGGCAGGCAGGGGAGGA +
Preference number: 2 (lower is better)
Translates to: LQRRAVPTPGTNVKA*ESAQQPWNQAGRGG
Trigger: TCCTCCCCTGCCTGCCTGATTCCATGGCTGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGACCTGCCTTCACCGGTaGACCTTTAGCCAGCTGAAC +
Preference number: 2 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQTCLHR*TFSQLN
Trigger: GTTCAGCTGGCTAAAGGTTCACCGGTGAAGGCAGGT...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCTATTGGCCTCTTAAGTaGGAATTGATCCGTGAAGGG +
Preference number: 2 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIYWPLK*ELIREG
Trigger: CCCTTCACGGATCAATTCTCACTTAAGAGGCCAATA...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCAGATACCAGTCCCAGGTaGGTGAGGCACTGTCCGGGA +
Preference number: 2 (lower is better)
Translates to: QRRAVPTPGTNVKALESADTSPR*VRHCPG
Trigger: TCCCGGACAGTGCCTCACTCACCTGGGACTGGTATC...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGGATACCAGTCCCAGGTaGGTGAGGCACTGTCCGGGA +
Preference number: 2 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEDTSPR*VRHCPG
Trigger: TCCCGGACAGTGCCTCACTCACCTGGGACTGGTATC...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGCTGGTAGAGACAGGGTaGGGACGCGCGAGGATGATG +
Preference number: 2 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTELVETG*GRARMM
Trigger: CATCATCCTCGCGCGTCCTCACCCTGTCTCTACCAG...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGCGCCAGGAACCAACGTaGAAGCATTGGAATCAGCAC +
Preference number: 2 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGRQEPT*KHWNQH
Trigger: GTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCG...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGCAGAAGCATCCACTCTaGAGGGACAGTGGCCCCTCG +
Preference number: 2 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEQKHPL*RDSGPS
Trigger: CGAGGGGCCACTGTCCCTGCAGAGTGGATGCTTCTG...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCGCTCGGGTTGGTGTTTaGTCAACTGCTTTACTCATT +
Preference number: 2 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIARVGV*STALLI
Trigger: AATGAGTAAAGCAGTTGAGCAAACACCAACCCGAGC...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGAGTCATCGAGCCCTCTaGCATGTCCCTGGTAGCCCG +
Preference number: 2 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWSHRAL*HVPGSP
Trigger: CGGGCTACCAGGGACATGCCAGAGGGCTCGATGACT...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCAAGTCATCGAGCCCTCTaGCATGTCCCTGGTAGCCCG +
Preference number: 2 (lower is better)
Translates to: QRRAVPTPGTNVKALESASHRAL*HVPGSP
Trigger: CGGGCTACCAGGGACATGCCAGAGGGCTCGATGACT...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCTATCTGGTGAAAACCTaGAGAACAAGAGCGGAGTCT +
Preference number: 2 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIYLVKT*RTRAES
Trigger: AGACTCCGCTCTTGTTCTCCAGGTTTTCACCAGATA...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACCAGAGACAACCTGCTaGCTGTCTTGGGATGCGCCC +
Preference number: 2 (lower is better)
Translates to: QRRAVPTPGTNVKALESAPETTC*LSWDAP
Trigger: GGGCGCATCCCAAGACAGCCAGCAGGTTGTCTCTGG...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCCAAATCTATCTGGTaGAAACCTGGAGAACAAGAG +
Preference number: 2 (lower is better)
Translates to: VDWHPNTESYAAGTWVRAPKSIW*KPGEQE
Trigger: CTCTTGTTCTCCAGGTTTTCACCAGATAGATTTGGG...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCAGGAACGGCAGACCCCTaGAACGAAGCTTGTCCCCTT +
Preference number: 2 (lower is better)
Translates to: QRRAVPTPGTNVKALESAGTADP*NEACPL
Trigger: AAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCC...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAACAGAAGCATCCACTCTaGAGGGACAGTGGCCCCTCG +
Preference number: 2 (lower is better)
Translates to: RECHCFFSKALETRHIKEQKHPL*RDSGPS
Trigger: CGAGGGGCCACTGTCCCTGCAGAGTGGATGCTTCTG...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGTTCCTGTCCTTCACCTaGACGTCACCAGCAGGTCCC +
Preference number: 2 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWFLSFT*TSPAGP
Trigger: GGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAA...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGAAGCCCCACCCCTCATaGTCTCCTCTGGTCACCTCT +
Preference number: 2 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEKPHPS*SPLVTS
Trigger: AGAGGTGACCAGAGGAGAGCATGAGGGGTGGGGCTT...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAAACTAGGCTGGCGGCATaGAGAGCCCACGTCTGTCAG +
Preference number: 2 (lower is better)
Translates to: RECHCFFSKALETRHIKETRLAA*RAHVCQ
Trigger: CTGACAGACGTGGGCTCTGCATGCCGCCAGCCTAGT...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTACTAGGCTGGCGGCATaGAGAGCCCACGTCTGTCAG +
Preference number: 2 (lower is better)
Translates to: ETKLVPFQSATSENPHLTTRLAA*RAHVCQ
Trigger: CTGACAGACGTGGGCTCTGCATGCCGCCAGCCTAGT...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTAGTCATCGAGCCCTCTaGCATGTCCCTGGTAGCCCG +
Preference number: 2 (lower is better)
Translates to: ETKLVPFQSATSENPHLTSHRAL*HVPGSP
Trigger: CGGGCTACCAGGGACATGCCAGAGGGCTCGATGACT...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGCAGATTGCGAATACCTaGGGCTTCCTAGGGTCCAGT +
Preference number: 2 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQQIANT*GFLGSS
Trigger: ACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTG...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAAGGAGGGGGTAGCAGCTaGGAGTCTGCTCTTCCAGCT +
Preference number: 2 (lower is better)
Translates to: RECHCFFSKALETRHIKEGGGSS*ESALPA
Trigger: AGCTGGAAGAGCAGACTCCCAGCTGCTACCCCCTCC...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGGCATTCTGCCCAAAATaGAAAGCCACTCCCATGGGA +
Preference number: 2 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGAFCPK*KATPMG
Trigger: TCCCATGGGAGTGGCTTTCCATTTTGGGCAGAATGC...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTCCAGAGACAACCTGCTaGCTGTCTTGGGATGCGCCC +
Preference number: 2 (lower is better)
Translates to: ETKLVPFQSATSENPHLTPETTC*LSWDAP
Trigger: GGGCGCATCCCAAGACAGCCAGCAGGTTGTCTCTGG...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGGCCGTCAGGCGACTCTaGAATTCCGACATTTCTCCC +
Preference number: 2 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWAVRRL*NSDISP
Trigger: GGGAGAAATGTCGGAATTTCAGAGTCGCCTGACGGC...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGTGGCTCAAGAGGATATaGGGACTGTCTCAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEWLKRI*GLSQPG
Trigger: GCCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCA...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCATGGCTCAAGAGGATATaGGGACTGTCTCAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: QRRAVPTPGTNVKALESAWLKRI*GLSQPG
Trigger: GCCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCA...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGATCCAGACCATACCATaGAGCAACGAGACCCAAACA +
Preference number: 2 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGIQTIP*SNETQT
Trigger: TGTTTGGGTCTCGTTGCTTCATGGTATGGTCTGGAT...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGACTGGGCTTCAACACTaGGTTGTCATGAGAGGGACA +
Preference number: 2 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQTGLQH*VVMRGT
Trigger: TGTCCCTCTCATGACAACTCAGTGTTGAAGCCCAGT...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGAAGCGCGGAGTGTTCTaGCTTTTCACCTACGCAGCC +
Preference number: 2 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWKRGVF*LFTYAA
Trigger: GGCTGCGTAGGTGAAAAGGCAGAACACTCCGCGCTT...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGATGGCCAAGGCCTCTCTaGAGACTCCACGGGGGCTCA +
Preference number: 2 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGWPRPL*RLHGGS
Trigger: TGAGCCCCCGTGGAGTCTGCAGAGAGGCCTTGGCCA...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGGAAGGTGAAGAATTCTaGGCCCGAAGCTCGGGTTGG +
Preference number: 2 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEEGEEF*ARSSGW
Trigger: CCAACCCGAGCTTCGGGCGCAGAATTCTTCACCTTC...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTTTCCTGTCCTTCACCTaGACGTCACCAGCAGGTCCC +
Preference number: 2 (lower is better)
Translates to: ETKLVPFQSATSENPHLTFLSFT*TSPAGP
Trigger: GGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAA...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGCCCACGTCTGTCAGCTaGCACCTTCGTAAAGCACAC +
Preference number: 2 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWPTSVS*HLRKAH
Trigger: GTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGG...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGCCCAGCCCTGATTTTTaGTACATATGGGGTCCCTTT +
Preference number: 2 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGPSPDF*YIWGPF
Trigger: AAAGGGACCCCATATGTAGCAAAAATCAGGGCTGGG...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGATCAAGCTCCAGCCACTaGCCCCGGTGGGTCCCAAAG +
Preference number: 2 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGSSSSH*PRWVPK
Trigger: CTTTGGGACCCACCGGGGCCAGTGGCTGGAGCTTGA...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAGTCTCAGCCTGGCTTTaGGCTGACACCATGCACACA +
Preference number: 2 (lower is better)
Translates to: ESSSHARNQRESIGISTTVSAWL*ADTMHT
Trigger: TGTGTGCATGGTGTCAGCCCAAAGCCAGGCTGAGAC...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGGTCTCAGCCTGGCTTTaGGCTGACACCATGCACACA +
Preference number: 2 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEVSAWL*ADTMHT
Trigger: TGTGTGCATGGTGTCAGCCCAAAGCCAGGCTGAGAC...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTATTGGCCTCTTAAGTaGGAATTGATCCGTGAAGGG +
Preference number: 2 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGYWPLK*ELIREG
Trigger: CCCTTCACGGATCAATTCTCACTTAAGAGGCCAATA...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAAAGGGGAAGAGAAGGTaGAGAATTCTGCGCCCGAAG +
Preference number: 2 (lower is better)
Translates to: ESSSHARNQRESIGISTTKGKRR*RILRPK
Trigger: CTTCGGGCGCAGAATTCTTCACCTTCTCTTCCCCTT...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGACAGAAGCATCCACTCTaGAGGGACAGTGGCCCCTCG +
Preference number: 2 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGQKHPL*RDSGPS
Trigger: CGAGGGGCCACTGTCCCTGCAGAGTGGATGCTTCTG...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGACTTCCTAGGGTCCAGTaGGGCAGTTACCGCACCTGC +
Preference number: 2 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGLPRVQ*GSYRTC
Trigger: GCAGGTGCGGTAACTGCCGCACTGGACCCTAGGAAG...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCAAGGAGGAGGTCAGATTaGGAATACCTGGGGCTTCCT +
Preference number: 2 (lower is better)
Translates to: QRRAVPTPGTNVKALESARRRSD*EYLGLP
Trigger: AGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGTACCCCATGAACTTCTaGCATCCACTGGACATGAAG +
Preference number: 2 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQYPMNF*HPLDMK
Trigger: CTTCATGTCCAGTGGATGGCAGAAGTTCATGGGGTA...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGTAGAACCGGGCTTTaGAGGGGAGATAATTTTCCT +
Preference number: 2 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGCRTGL*RGDNFP
Trigger: AGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACA...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGCAGATTGCGAATACCTaGGGCTTCCTAGGGTCCAGT +
Preference number: 2 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEQIANT*GFLGSS
Trigger: ACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTG...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGCCCTTTCACCTATCCTaGGAGAAACCCAGGCTTGTC +
Preference number: 2 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEPFHLS*EKPRLV
Trigger: GACAAGCCTGGGTTTCTCCCAGGATAGGTGAAAGGG...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAGCCCGAAGCTCGGGTTaGTGTTTGCTCAACTGCTTT +
Preference number: 2 (lower is better)
Translates to: ESSSHARNQRESIGISTTARSSG*CLLNCF
Trigger: AAAGCAGTTGAGCAAACACCAACCCGAGCTTCGGGC...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTATCTGGTGAAAACCTaGAGAACAAGAGCGGAGTCT +
Preference number: 2 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGYLVKT*RTRAES
Trigger: AGACTCCGCTCTTGTTCTCCAGGTTTTCACCAGATA...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTAGGACTGTCTCAGCCTaGCTTTGGGCTGACACCATG +
Preference number: 2 (lower is better)
Translates to: ETKLVPFQSATSENPHLTRTVSA*LWADTM
Trigger: CATGGTGTCAGCCCAAAGCCAGGCTGAGACAGTCCT...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CAA 90 bp CCCACAAATCCAGACCATACCATGAAGCAACGAGACCCAAACAGTTaGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGCTTTGGGCT +
Preference number: 2 (lower is better)
Translates to: PTNPDHTMKQRDPNS*AQEDMRTVSAWLWA
Trigger: AGCCCAAAGCCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTGCTTCATGGTATGGTCTGGATTTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAGTGAGAATTGATCCGTaGAGGGAAACAGACAGGAGG +
Preference number: 2 (lower is better)
Translates to: ESSSHARNQRESIGISTTVRIDP*RETDRR
Trigger: CCTCCTGTCTGTTTCCCTTCACGGATCAATTCTCAC...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTAAGGGGAAGAGAAGGTaGAGAATTCTGCGCCCGAAG +
Preference number: 2 (lower is better)
Translates to: ETKLVPFQSATSENPHLTKGKRR*RILRPK
Trigger: CTTCGGGCGCAGAATTCTTCACCTTCTCTTCCCCTT...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCCTGGTAGAGACAGGGTaGGGACGCGCGAGGATGATG +
Preference number: 2 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLLVETG*GRARMM
Trigger: CATCATCCTCGCGCGTCCTCACCCTGTCTCTACCAG...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAACTGGGCTTCAACACTaGGTTGTCATGAGAGGGACA +
Preference number: 2 (lower is better)
Translates to: ESSSHARNQRESIGISTTTGLQH*VVMRGT
Trigger: TGTCCCTCTCATGACAACTCAGTGTTGAAGCCCAGT...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAAAGGAGGAGGTCAGATTaGGAATACCTGGGGCTTCCT +
Preference number: 2 (lower is better)
Translates to: RECHCFFSKALETRHIKERRRSD*EYLGLP
Trigger: AGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGGCTCGGGTTGGTGTTTaGTCAACTGCTTTACTCATT +
Preference number: 2 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQARVGV*STALLI
Trigger: AATGAGTAAAGCAGTTGAGCAAACACCAACCCGAGC...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGAAAGCCCCACCCCTCATaGTCTCCTCTGGTCACCTCT +
Preference number: 2 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGKPHPS*SPLVTS
Trigger: AGAGGTGACCAGAGGAGAGCATGAGGGGTGGGGCTT...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGCGACGGGAGTGTCACTaGTTCTTCAGTAAGGCACTA +
Preference number: 2 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTERRECH*FFSKAL
Trigger: TAGTGCCTTACTGAAGAAGCAGTGACACTCCCGTCG...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGAGGCAAAACCACTACCTaGAACTCGGTGCCTCCGTGG +
Preference number: 2 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGGKTTT*NSVPPW
Trigger: CCACGGAGGCACCGAGTTCCAGGTAGTGGTTTTGCC...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTGCCCGAAGCTCGGGTTaGTGTTTGCTCAACTGCTTT +
Preference number: 2 (lower is better)
Translates to: ETKLVPFQSATSENPHLTARSSG*CLLNCF
Trigger: AAAGCAGTTGAGCAAACACCAACCCGAGCTTCGGGC...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACCTCATGCTCTCCTCTaGTCACCTCTATTTACGCTC +
Preference number: 2 (lower is better)
Translates to: QRRAVPTPGTNVKALESAPHALL*SPLFTL
Trigger: GAGCGTAAATAGAGGTGACCAGAGGAGAGCATGAGG...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGCCTCATGCTCTCCTCTaGTCACCTCTATTTACGCTC +
Preference number: 2 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEPHALL*SPLFTL
Trigger: GAGCGTAAATAGAGGTGACCAGAGGAGAGCATGAGG...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCGGAGGGGGTAGCAGCTaGGAGTCTGCTCTTCCAGCT +
Preference number: 2 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLGGGSS*ESALPA
Trigger: AGCTGGAAGAGCAGACTCCCAGCTGCTACCCCCTCC...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAGCATTCTGCCCAAAATaGAAAGCCACTCCCATGGGA +
Preference number: 2 (lower is better)
Translates to: ESSSHARNQRESIGISTTAFCPK*KATPMG
Trigger: TCCCATGGGAGTGGCTTTCCATTTTGGGCAGAATGC...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCAGCATTCTGCCCAAAATaGAAAGCCACTCCCATGGGA +
Preference number: 2 (lower is better)
Translates to: QRRAVPTPGTNVKALESAAFCPK*KATPMG
Trigger: TCCCATGGGAGTGGCTTTCCATTTTGGGCAGAATGC...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACATGCATGAGCTCGAGTaGCTAGAACTTCAAAACTGT +
Preference number: 2 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHMHELE*LELQNC
Trigger: ACAGTTTTGAAGTTCTAGCCACTCGAGCTCATGCAT...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGATGCATGAGCTCGAGTaGCTAGAACTTCAAAACTGT +
Preference number: 2 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGMHELE*LELQNC
Trigger: ACAGTTTTGAAGTTCTAGCCACTCGAGCTCATGCAT...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGCTCTTAAGTGAGAATTaGTCCGTGAAGGGAAACAGA +
Preference number: 2 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQLLSEN*SVKGNR
Trigger: TCTGTTTCCCTTCACGGATCAATTCTCACTTAAGAG...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGCGGGATAACCTGTACTaGTTTCTCTGCAGGACCTTT +
Preference number: 2 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTERDNLY*FLCRTF
Trigger: AAAGGTCCTGCAGAGAAATCAGTACAGGTTATCCCG...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAATCCAGACCATACCATaGAGCAACGAGACCCAAACA +
Preference number: 2 (lower is better)
Translates to: ESSSHARNQRESIGISTTIQTIP*SNETQT
Trigger: TGTTTGGGTCTCGTTGCTTCATGGTATGGTCTGGAT...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGAACCACCAAAGCGCCCTaGAGAGACAAGTCATCGAGC +
Preference number: 2 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGTTKAP*RDKSSS
Trigger: GCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGT...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGAGAAGGTGAAGAATTCTaGGCCCGAAGCTCGGGTTGG +
Preference number: 2 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGEGEEF*ARSSGW
Trigger: CCAACCCGAGCTTCGGGCGCAGAATTCTTCACCTTC...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGAATCATCTTTACAAGTaGGTCCTTGTACCTTTCGGG +
Preference number: 2 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQNHLYK*VLVPFG
Trigger: CCCGAAAGGTACAAGGACGCACTTGTAAAGATGATT...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACATACCCCATGAACTTCTaGCATCCACTGGACATGAAG +
Preference number: 2 (lower is better)
Translates to: ESSSHARNQRESIGISTTYPMNF*HPLDMK
Trigger: CTTCATGTCCAGTGGATGGCAGAAGTTCATGGGGTA...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACACCCAGCCCTGATTTTTaGTACATATGGGGTCCCTTT +
Preference number: 2 (lower is better)
Translates to: ESSSHARNQRESIGISTTPSPDF*YIWGPF
Trigger: AAAGGGACCCCATATGTAGCAAAAATCAGGGCTGGG...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CAA 90 bp GGAAGAGAAGGTGAAGAATTCTGCGCCCGAAGCTCGGGTTGGTGTTaGCTCAACTGCTTTACTCATTTTAACCCTTTCACCTATCCTGGG +
Preference number: 2 (lower is better)
Translates to: GREGEEFCARSSGWC*LNCFTHFNPFTYPG
Trigger: CCCAGGATAGGTGAAAGGGTTAAAATGAGTAAAGCAGTTGAGCAAACACCAACCCGAGCTTCGGGCGCAGAATTCTTCACCTTCTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGTTCCTATTTTGCTTGTaGTTTAAAGGCTGTTCTGGG +
Preference number: 2 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQFLFCL*FKGCSG
Trigger: CCCAGAACAGCCTTTAAATCACAAGCAAAATAGGAA...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCGAACCTTTAGCCAGCTaGACAACCACCAAAGCGCCC +
Preference number: 2 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLEPLAS*TTTKAP
Trigger: GGGCGCTTTGGTGGTTGTTCAGCTGGCTAAAGGTTC...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGACCTGCCTTCACCGGTaGACCTTTAGCCAGCTGAAC +
Preference number: 2 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKTCLHR*TFSQLN
Trigger: GTTCAGCTGGCTAAAGGTTCACCGGTGAAGGCAGGT...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGCCCAAATCTATCTGGTaGAAACCTGGAGAACAAGAG +
Preference number: 2 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWPKSIW*KPGEQE
Trigger: CTCTTGTTCTCCAGGTTTTCACCAGATAGATTTGGG...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAAAACAAATTTTAGGCTaGCGACTTCACGGAGAGGCA +
Preference number: 2 (lower is better)
Translates to: ESSSHARNQRESIGISTTKQILG*RLHGEA
Trigger: TGCCTCTCCGTGAAGTCGTCAGCCTAAAATTTGTTT...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTACATAAGTTTAACTTaGACAGAGCTTGGGAAATGG +
Preference number: 2 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGYISLT*TELGKW
Trigger: CCATTTCCCAAGCTCTGTTCAAGTTAAACTTATGTA...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGATACAAAAATACTCCTaGCCTCGCACATACAGTTTC +
Preference number: 2 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQIQKYS*PRTYSF
Trigger: GAAACTGTATGTGCGAGGGCAGGAGTATTTTTGTAT...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACATGTAGAACCGGGCTTTaGAGGGGAGATAATTTTCCT +
Preference number: 2 (lower is better)
Translates to: ESSSHARNQRESIGISTTCRTGL*RGDNFP
Trigger: AGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACA...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAAACTCGGTGCCTCCGTaGTTAACTTTCCTATTTTGC +
Preference number: 2 (lower is better)
Translates to: ESSSHARNQRESIGISTTNSVPP*LTFLFC
Trigger: GCAAAATAGGAAAGTTAACCACGGAGGCACCGAGTT...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGGTCACCTTTTCATGTTaGGTTGTTTATTGGCCTCTT +
Preference number: 2 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQVTFSC*VVYWPL
Trigger: AAGAGGCCAATAAACAACCCAACATGAAAAGGTGAC...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGACCCTTTCACCTATCCTaGGAGAAACCCAGGCTTGTC +
Preference number: 2 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGPFHLS*EKPRLV
Trigger: GACAAGCCTGGGTTTCTCCCAGGATAGGTGAAAGGG...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCAACTTTCTACTAGGCTaGCGGCATGCAGAGCCCACG +
Preference number: 2 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLNFLLG*RHAEPT
Trigger: CGTGGGCTCTGCATGCCGCCAGCCTAGTAGAAAGTT...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCAGGACTGTCTCAGCCTaGCTTTGGGCTGACACCATG +
Preference number: 2 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLRTVSA*LWADTM
Trigger: CATGGTGTCAGCCCAAAGCCAGGCTGAGACAGTCCT...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACACTCTTAAGTGAGAATTaGTCCGTGAAGGGAAACAGA +
Preference number: 2 (lower is better)
Translates to: ESSSHARNQRESIGISTTLLSEN*SVKGNR
Trigger: TCTGTTTCCCTTCACGGATCAATTCTCACTTAAGAG...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCAAGGGGAAGAGAAGGTaGAGAATTCTGCGCCCGAAG +
Preference number: 2 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLKGKRR*RILRPK
Trigger: CTTCGGGCGCAGAATTCTTCACCTTCTCTTCCCCTT...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAACCCAAATCTATCTGGTaGAAACCTGGAGAACAAGAG +
Preference number: 2 (lower is better)
Translates to: RECHCFFSKALETRHIKEPKSIW*KPGEQE
Trigger: CTCTTGTTCTCCAGGTTTTCACCAGATAGATTTGGG...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCAAGCGCGGAGTGTTCTaGCTTTTCACCTACGCAGCC +
Preference number: 2 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSKRGVF*LFTYAA
Trigger: GGCTGCGTAGGTGAAAAGGCAGAACACTCCGCGCTT...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTTATCTGGTGAAAACCTaGAGAACAAGAGCGGAGTCT +
Preference number: 2 (lower is better)
Translates to: ETKLVPFQSATSENPHLTYLVKT*RTRAES
Trigger: AGACTCCGCTCTTGTTCTCCAGGTTTTCACCAGATA...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGTTCCTATTTTGCTTGTaGTTTAAAGGCTGTTCTGGG +
Preference number: 2 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEFLFCL*FKGCSG
Trigger: CCCAGAACAGCCTTTAAATCACAAGCAAAATAGGAA...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCGTGAGAATTGATCCGTaGAGGGAAACAGACAGGAGG +
Preference number: 2 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLVRIDP*RETDRR
Trigger: CCTCCTGTCTGTTTCCCTTCACGGATCAATTCTCAC...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAAAATCATCTTTACAAGTaGGTCCTTGTACCTTTCGGG +
Preference number: 2 (lower is better)
Translates to: RECHCFFSKALETRHIKENHLYK*VLVPFG
Trigger: CCCGAAAGGTACAAGGACGCACTTGTAAAGATGATT...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGGTCACCTTTTCATGTTaGGTTGTTTATTGGCCTCTT +
Preference number: 2 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEVTFSC*VVYWPL
Trigger: AAGAGGCCAATAAACAACCCAACATGAAAAGGTGAC...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR GCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAAATACAAAAATACTCCTaGCCTCGCACATACAGTTTC +
Preference number: 2 (lower is better)
Translates to: RECHCFFSKALETRHIKEIQKYS*PRTYSF
Trigger: GAAACTGTATGTGCGAGGGCAGGAGTATTTTTGTAT...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTGTCACCTTTTCATGTTaGGTTGTTTATTGGCCTCTT +
Preference number: 2 (lower is better)
Translates to: ETKLVPFQSATSENPHLTVTFSC*VVYWPL
Trigger: AAGAGGCCAATAAACAACCCAACATGAAAAGGTGAC...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAGATTTTTGCTACATATaGGGTCCCTTTTCATTCTTT +
Preference number: 2 (lower is better)
Translates to: ESSSHARNQRESIGISTTDFCYI*GPFSFF
Trigger: AAAGAATGAAAAGGGACCCCATATGTAGCAAAAATC...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR TCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGATTCCTATTTTGCTTGTaGTTTAAAGGCTGTTCTGGG +
Preference number: 2 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGFLFCL*FKGCSG
Trigger: CCCAGAACAGCCTTTAAATCACAAGCAAAATAGGAA...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGAGTCACCTTTTCATGTTaGGTTGTTTATTGGCCTCTT +
Preference number: 2 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGVTFSC*VVYWPL
Trigger: AAGAGGCCAATAAACAACCCAACATGAAAAGGTGAC...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCATGCATGAGCTCGAGTaGCTAGAACTTCAAAACTGT +
Preference number: 2 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLMHELE*LELQNC
Trigger: ACAGTTTTGAAGTTCTAGCCACTCGAGCTCATGCAT...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CAA 90 bp TTTACTCATTTTAACCCTTTCACCTATCCTGGGAGAAACCCAGGCTaGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGTGAG +
Preference number: 2 (lower is better)
Translates to: FTHFNPFTYPGRNPG*SPFHVGLFIGLLSE
Trigger: CTCACTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTCCCAGGATAGGTGAAAGGGTTAAAATGAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR GCA 72 bp CTCGGGAAAGCCCGCCGCTCCTGGCCAAGGCCTCTCTaGAGACTCCACGGGGGCTCACCCTCTGCCGTCAGG +
Preference number: 3 (lower is better)
Translates to: LGKARRSWPRPL*RLHGGSPSAVR
Trigger: CCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCCTTGGCCAGGAGCGGCGGGCTTTCCCGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 72 bp GGTGGACCCTGGGAGGGGATACCAGTCCCAGGTGAGTaGGGCACTGTCCGGGAACGTCCTCACCGAGCGACG +
Preference number: 3 (lower is better)
Translates to: GGPWEGIPVPGE*GTVRERPHRAT
Trigger: CGTCGCTCGGTGAGGACGTTCCCGGACAGTGCCTCACTCACCTGGGACTGGTATCCCCTCCCAGGGTCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CCA 72 bp GAAAGCCACTCCCATGGGAAGGGAGGGGGTAGCAGCTaGGAGTCTGCTCTTCCAGCTGGGGGCCCTCCCACC +
Preference number: 3 (lower is better)
Translates to: ESHSHGKGGGSS*ESALPAGGPPT
Trigger: GGTGGGAGGGCCCCCAGCTGGAAGAGCAGACTCCCAGCTGCTACCCCCTCCCTTCCCATGGGAGTGGCTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 72 bp CCTTGGTGGACCCTGGGAGGGGATACCAGTCCCAGGTaGGTGAGGCACTGTCCGGGAACGTCCTCACCGAGC +
Preference number: 3 (lower is better)
Translates to: PWWTLGGDTSPR*VRHCPGTSSPS
Trigger: GCTCGGTGAGGACGTTCCCGGACAGTGCCTCACTCACCTGGGACTGGTATCCCCTCCCAGGGTCCACCAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAACCAGAAGGGAAGCGTaGTTTCCGCGGGGAAAGGAG +
Preference number: 3 (lower is better)
Translates to: KYRVLRSGDVGARPACHGTRREA*FPRGKE
Trigger: CTCCTTTCCCCGCGGAAACAACGCTTCCCTTCTGGT...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCAGGAGGAGGTCAGATaGCGAATACCTGGGGCTTCC +
Preference number: 3 (lower is better)
Translates to: VDWHPNTESYAAGTWVRAQEEVR*RIPGAS
Trigger: GGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCTG...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 72 bp GTCCAGTGCGGCAGTTACCGCACCTGCCTTCACCGGTaGACCTTTAGCCAGCTGAACAACCACCAAAGCGCC +
Preference number: 3 (lower is better)
Translates to: VQCGSYRTCLHR*TFSQLNNHQSA
Trigger: GGCGCTTTGGTGGTTGTTCAGCTGGCTAAAGGTTCACCGGTGAAGGCAGGTGCGGTAACTGCCGCACTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 72 bp CTCACCAAGCTAGGCACCTCCCTGGTAGAGACAGGGTaGGGACGCGCGAGGATGATGGGGTGTCTGAAAAGC +
Preference number: 3 (lower is better)
Translates to: LTKLGTSLVETG*GRARMMGCLKS
Trigger: GCTTTTCAGACACCCCATCATCCTCGCGCGTCCTCACCCTGTCTCTACCAGGGAGGTGCCTAGCTTGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR GCA 72 bp AAGGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTaGCGTCAGGCGACTCTGAAATTCCGACATTTCTCC +
Preference number: 3 (lower is better)
Translates to: KASLQTPRGLTL*RQATLKFRHFS
Trigger: GGAGAAATGTCGGAATTTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CCA 72 bp TGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTaGGTGCGCGCCCCGCATGCCACGGAAAGCTTACAT +
Preference number: 3 (lower is better)
Translates to: WHPNTESYAAGT*VRAPHATESLH
Trigger: ATGTAAGCTTTCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACCGCCCGAAGCTCGGGTaGGTGTTTGCTCAACTGCTT +
Preference number: 3 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHRPKLG*VFAQLL
Trigger: AAGCAGTTGAGCAAACACCAACCCGAGCTTCGGGCG...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGCGCCCGAAGCTCGGGTaGGTGTTTGCTCAACTGCTT +
Preference number: 3 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGRPKLG*VFAQLL
Trigger: AAGCAGTTGAGCAAACACCAACCCGAGCTTCGGGCG...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR GCA 72 bp GCCCAGCCTTTGAGAGGCCACTACCCCATGAACTTCTaGCATCCACTGGACATGAAGCTGAGGACACTGGGC +
Preference number: 3 (lower is better)
Translates to: AQPLRGHYPMNF*HPLDMKLRTLG
Trigger: GCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTTCATGGGGTAGTGGCCTCTCAAAGGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR GCA 72 bp GTCGTTTCCAGAGACAACCTGCTGGCTGTCTTGGGATaGGCCCAGCCTTTGAGAGGCCACTACCCCATGAAC +
Preference number: 3 (lower is better)
Translates to: VVSRDNLLAVLG*AQPLRGHYPMN
Trigger: GTTCATGGGGTAGTGGCCTCTCAAAGGCTGGGCGCATCCCAAGACAGCCAGCAGGTTGTCTCTGGAAACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CCA 72 bp GGGAAACAGACAGGAGGAGGTCAGATTGCGAATACCTaGGGCTTCCTAGGGTCCAGTGCGGCAGTTACCGCA +
Preference number: 3 (lower is better)
Translates to: GKQTGGGQIANT*GFLGSSAAVTA
Trigger: TGCGGTAACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCTGTCTGTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 72 bp ACCGCACCTGCCTTCACCGGTGAACCTTTAGCCAGCTaGACAACCACCAAAGCGCCCTGCAGAGACAAGTCA +
Preference number: 3 (lower is better)
Translates to: TAPAFTGEPLAS*TTTKAPCRDKS
Trigger: TGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGCTGGCTAAAGGTTCACCGGTGAAGGCAGGTGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 72 bp CGGCCTTCTCTGAACCAGGATGGAACGGCAGACCCCTaGAACGAAGCTTGTCCCCTTCCAATCAGCCACTTC +
Preference number: 3 (lower is better)
Translates to: RPSLNQDGTADP*NEACPLPISHF
Trigger: GAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTCAGAGAAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR GCA 72 bp CTATTTACGCTCACATGCCCCTTCCTGTCCTTCACCTaGACGTCACCAGCAGGTCCCGCCAACCCCAAATCT +
Preference number: 3 (lower is better)
Translates to: LFTLTCPFLSFT*TSPAGPANPKS
Trigger: AGATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGGCATGTGAGCGTAAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR GCA 72 bp ATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTaGGCGCCCCGCATGCCACGGAAAGCTTACATAAGT +
Preference number: 3 (lower is better)
Translates to: IQIQSLTQRGRG*APRMPRKAYIS
Trigger: ACTTATGTAAGCTTTCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCGCAAGCTCTCTTAGCTaGTGCATTCAGACCAGACAT +
Preference number: 3 (lower is better)
Translates to: VDWHPNTESYAAGTWVRAASSLS*CIQTRH
Trigger: ATGTCTGGTCTGAATGCACAAGCTAAGAGAGCTTGC...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCAAACCTGCTGGCTGTCTaGGGATGCGCCCAGCCTTTG +
Preference number: 3 (lower is better)
Translates to: QRRAVPTPGTNVKALESANLLAV*GCAQPL
Trigger: CAAAGGCTGGGCGCATCCCAAGACAGCCAGCAGGTT...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 72 bp CTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTaGAATTCCGACATTTCTCCCTTAAAGTCTCAACAG +
Preference number: 3 (lower is better)
Translates to: LHGGSPSAVRRL*NSDISPLKSQQ
Trigger: CTGTTGAGACTTTAAGGGAGAAATGTCGGAATTTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGGGGAGAAACCCAGGCTaGTCACCTTTTCATGTTGGG +
Preference number: 3 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQGRNPG*SPFHVG
Trigger: CCCAACATGAAAAGGTGACAAGCCTGGGTTTCTCCC...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGAGGCAGGTTCTGCTGTaGCCAATGAACGAGAACTTT +
Preference number: 3 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGRQVLL*PMNENF
Trigger: AAAGTTCTCGTTCATTGGCAACAGCAGAACCTGCCT...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGCGAGACCCAAACAGTTaGGCTCAAGAGGATATGAGG +
Preference number: 3 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQRDPNS*AQEDMR
Trigger: CCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCG...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 72 bp TCACCAGCAGGTCCCGCCAACCCCAAATCTATCTGGTaGAAACCTGGAGAACAAGAGCGGAGTCTAAGAGAG +
Preference number: 3 (lower is better)
Translates to: SPAGPANPKSIW*KPGEQERSLRE
Trigger: CTCTCTTAGACTCCGCTCTTGTTCTCCAGGTTTTCACCAGATAGATTTGGGGTTGGCGGGACCTGCTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 72 bp ACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTaGGTTGTCATGAGAGGGACAGGCTCTGTCCTCAAG +
Preference number: 3 (lower is better)
Translates to: TGHEAEDTGLQH*VVMRGTGSVLK
Trigger: CTTGAGGACAGAGCCTGTCCCTCTCATGACAACTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 72 bp GTACAATTCATAGGGACGACCAATGAGGACAGGGAATaGACCCGGCTCTCCCCCAGCCCTGATTTTTGCTAC +
Preference number: 3 (lower is better)
Translates to: VQFIGTTNEDRE*TRLSPSPDFCY
Trigger: GTAGCAAAAATCAGGGCTGGGGGAGAGCCGGGTTCATTCCCTGTCCTCATTGGTCGTCCCTATGAATTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 72 bp ATTTCTCTGAAACGTACAATTCATAGGGACGACCAATaGGGACAGGGAATGAACCCGGCTCTCCCCCAGCCC +
Preference number: 3 (lower is better)
Translates to: ISLKRTIHRDDQ*GQGMNPALPQP
Trigger: GGGCTGGGGGAGAGCCGGGTTCATTCCCTGTCCTCATTGGTCGTCCCTATGAATTGTACGTTTCAGAGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CCA 72 bp TCAGCCACTTCTGAGAACCCCCATCTAACTTCCTACTaGAAAAGAGGGCCTCCTCAGGAGCAGTCCAAGAGT +
Preference number: 3 (lower is better)
Translates to: SATSENPHLTSY*KRGPPQEQSKS
Trigger: ACTCTTGGACTGCTCCTGAGGAGGCCCTCTTTTCCAGTAGGAAGTTAGATGGGGGTTCTCAGAAGTGGCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCTTTTCATGTTGGGTaGTTTATTGGCCTCTTAAGT +
Preference number: 3 (lower is better)
Translates to: VDWHPNTESYAAGTWVRAPFHVG*FIGLLS
Trigger: ACTTAAGAGGCCAATAAACAACCCAACATGAAAAGG...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGAGCTCGGGTTGGTGTTaGCTCAACTGCTTTACTCAT +
Preference number: 3 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQSSGWC*LNCFTH
Trigger: ATGAGTAAAGCAGTTGAGCAAACACCAACCCGAGCT...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGACAGGAGGAGGTCAGATaGCGAATACCTGGGGCTTCC +
Preference number: 3 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGQEEVR*RIPGAS
Trigger: GGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCTG...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACACGAGACCCAAACAGTTaGGCTCAAGAGGATATGAGG +
Preference number: 3 (lower is better)
Translates to: ESSSHARNQRESIGISTTRDPNS*AQEDMR
Trigger: CCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCG...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 72 bp TGCAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTaGAAGCATTGGAATCAGCACAACAGCCATGGAATC +
Preference number: 3 (lower is better)
Translates to: CKGEQFPRQEPT*KHWNQHNSHGI
Trigger: GATTCCATGGCTGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAGCAAGCTCTCTTAGCTaGTGCATTCAGACCAGACAT +
Preference number: 3 (lower is better)
Translates to: ESSSHARNQRESIGISTTASSLS*CIQTRH
Trigger: ATGTCTGGTCTGAATGCACAAGCTAAGAGAGCTTGC...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCCGCCCGAAGCTCGGGTaGGTGTTTGCTCAACTGCTT +
Preference number: 3 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLRPKLG*VFAQLL
Trigger: AAGCAGTTGAGCAAACACCAACCCGAGCTTCGGGCG...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGAGGCAGGTTCTGCTGTaGCCAATGAACGAGAACTTT +
Preference number: 3 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWRQVLL*PMNENF
Trigger: AAAGTTCTCGTTCATTGGCAACAGCAGAACCTGCCT...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 72 bp CACGCAAAGCCATTCCCACAAATCCAGACCATACCATaGAGCAACGAGACCCAAACAGTTTGGCTCAAGAGG +
Preference number: 3 (lower is better)
Translates to: HAKPFPQIQTIP*SNETQTVWLKR
Trigger: CCTCTTGAGCCAAACTGTTTGGGTCTCGTTGCTTCATGGTATGGTCTGGATTTGTGGGAATGGCTTTGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 72 bp CCCCGCATGCCACGGAAAGCTTACATAAGTTTAACTTaGACAGAGCTTGGGAAATGGGGCTGCAAAGGAGAG +
Preference number: 3 (lower is better)
Translates to: PRMPRKAYISLT*TELGKWGCKGE
Trigger: CTCTCCTTTGCAGCCCCATTTCCCAAGCTCTGTTCAAGTTAAACTTATGTAAGCTTTCCGTGGCATGCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGAGGGAGAAACCCAGGCTaGTCACCTTTTCATGTTGGG +
Preference number: 3 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGGRNPG*SPFHVG
Trigger: CCCAACATGAAAAGGTGACAAGCCTGGGTTTCTCCC...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCCCCCTGAAACGAAGCTaGTCCCCTTCCAATCAGCCA +
Preference number: 3 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLPLKRS*SPSNQP
Trigger: TGGCTGATTGGAAGGGGACAAGCTTCGTTTCAGGGG...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 72 bp AGCTGCCACCTTCGTAAAGCACACGTTTCACATGCATaGGCTCGAGTGGCTAGAACTTCAAAACTGTGCTCA +
Preference number: 3 (lower is better)
Translates to: SCHLRKAHVSHA*ARVARTSKLCS
Trigger: TGAGCACAGTTTTGAAGTTCTAGCCACTCGAGCTCATGCATGTGAAACGTGTGCTTTACGAAGGTGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAGTCCCTTTTCATTCTTaGCAAAAACACTGGGCTTTC +
Preference number: 3 (lower is better)
Translates to: ESSSHARNQRESIGISTTVPFHS*QKHWAF
Trigger: GAAAGCCCAGTGTTTTTGCAAAGAATGAAAAGGGAC...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGAGCAAGCTCTCTTAGCTaGTGCATTCAGACCAGACAT +
Preference number: 3 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGASSLS*CIQTRH
Trigger: ATGTCTGGTCTGAATGCACAAGCTAAGAGAGCTTGC...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGCCTTTTCATGTTGGGTaGTTTATTGGCCTCTTAAGT +
Preference number: 3 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEPFHVG*FIGLLS
Trigger: ACTTAAGAGGCCAATAAACAACCCAACATGAAAAGG...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR GCA 72 bp GTGAAGAATTCTGCGCCCGAAGCTCGGGTTGGTGTTTaGTCAACTGCTTTACTCATTTTAACCCTTTCACCT +
Preference number: 3 (lower is better)
Translates to: VKNSAPEARVGV*STALLILTLSP
Trigger: AGGTGAAAGGGTTAAAATGAGTAAAGCAGTTGAGCAAACACCAACCCGAGCTTCGGGCGCAGAATTCTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CCA 72 bp AGAGAAGGTGAAGAATTCTGCGCCCGAAGCTCGGGTTaGTGTTTGCTCAACTGCTTTACTCATTTTAACCCT +
Preference number: 3 (lower is better)
Translates to: REGEEFCARSSG*CLLNCFTHFNP
Trigger: AGGGTTAAAATGAGTAAAGCAGTTGAGCAAACACCAACCCGAGCTTCGGGCGCAGAATTCTTCACCTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CCA 72 bp AGGTCCCGCCAACCCCAAATCTATCTGGTGAAAACCTaGAGAACAAGAGCGGAGTCTAAGAGAGATGTAAAT +
Preference number: 3 (lower is better)
Translates to: RSRQPQIYLVKT*RTRAESKRDVN
Trigger: ATTTACATCTCTCTTAGACTCCGCTCTTGTTCTCCAGGTTTTCACCAGATAGATTTGGGGTTGGCGGGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTCCTTTTCATGTTGGGTaGTTTATTGGCCTCTTAAGT +
Preference number: 3 (lower is better)
Translates to: ETKLVPFQSATSENPHLTPFHVG*FIGLLS
Trigger: ACTTAAGAGGCCAATAAACAACCCAACATGAAAAGG...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 72 bp AAAGAATCCTCTTCAAGAGAGAAACAAATTTTAGGCTaGCGACTTCACGGAGAGGCAGGTTCTGCTGTTGCC +
Preference number: 3 (lower is better)
Translates to: KESSSREKQILG*RLHGEAGSAVA
Trigger: GGCAACAGCAGAACCTGCCTCTCCGTGAAGTCGTCAGCCTAAAATTTGTTTCTCTCTTGAAGAGGATTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CCA 72 bp ATTACTGATACACAACAAGCAGTTTCTTCAGGCCTGTaGATTGGCATCCAAATACAGAGTCTTACGCAGCGG +
Preference number: 3 (lower is better)
Translates to: ITDTQQAVSSGL*IGIQIQSLTQR
Trigger: CCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGAAGAAACTGCTTGTTGTGTATCAGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR-3UTR CAA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGACCTTTTCATGTTGGGTaGTTTATTGGCCTCTTAAGT +
Preference number: 3 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGPFHVG*FIGLLS
Trigger: ACTTAAGAGGCCAATAAACAACCCAACATGAAAAGG...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CCA 72 bp TTCGTAAAGCACACGTTTCACATGCATGAGCTCGAGTaGCTAGAACTTCAAAACTGTGCTCAGGTTTTTGTT +
Preference number: 3 (lower is better)
Translates to: FVKHTFHMHELE*LELQNCAQVFV
Trigger: AACAAAAACCTGAGCACAGTTTTGAAGTTCTAGCCACTCGAGCTCATGCATGTGAAACGTGTGCTTTACGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR TCA 72 bp GCTTTTCAGAATGTCATCATTGCCACTAATGATTACTaGTACACAACAAGCAGTTTCTTCAGGCCTGTGGAT +
Preference number: 3 (lower is better)
Translates to: AFQNVIIATNDY*YTTSSFFRPVD
Trigger: ATCCACAGGCCTGAAGAAACTGCTTGTTGTGTATCAGTAATCATTAGTGGCAATGATGACATTCTGAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGATACGCAGCGGGGACGTaGGTGCGCGCCCCGCATGCC +
Preference number: 4 (lower is better)
Translates to: KYRVLRSGDVGARPACHGYAAGT*VRAPHA
Trigger: GGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTA...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCTACGCAGCGGGGACGTaGGTGCGCGCCCCGCATGCC +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIYAAGT*VRAPHA
Trigger: GGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTA...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCCCATCAAGCGGTGCATaGACGGCGCGGCGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIPSSGA*TARRRG
Trigger: GCCGCGCCGCCGCGCCGTCCATGCACCGCTTGATGG...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341744.8
CDS-3UTR GCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCACCCCCATCAAGCGGTaGATGGACGGCGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQITPIKR*MDGAAA
Trigger: CGCCGCCGCGCCGTCCATGCACCGCTTGATGGGGGT...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000341744.8
CDS-3UTR CCA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAAACTCTGCAGGGACAGTaGCCCCTCGGGAAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: GLSADSTGAHPLPSGDSETLQGQ*PLGKAR
Trigger: GCGGGCTTTCCCGAGGGGCCACTGTCCCTGCAGAGT...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAACGTTGCCTGACACTGTaGTCTCCGAGGGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: GLSADSTGAHPLPSGDSERCLTL*SPRATG
Trigger: GCCTGTGGCCCTCGGAGAGCACAGTGTCAGGCAACG...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAACGGTTCAGTTCCAGCTaGTGCTCGGGGTCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: GLSADSTGAHPLPSGDSERFSSS*CSGSRS
Trigger: GCTTCGGGACCCCGAGCAGCAGCTGGAACTGAACCG...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCCCTGGTAGCCCCGGGTAGTGGCCGATaGCCTCGCTGTAGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: QSALQRQVIEPSGMSLVAPGSGR*PRCRWA
Trigger: CGCCCACCTACAGCGAGGTCATCGGCCACTACCCGG...GGCTACCAGGGACATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTCGCTGCCGCCGGGGCTaGGCCTCTGCCGCTAGCTTT +
Preference number: 4 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSRCRRG*ASAASF
Trigger: AAAGCTAGCGGCAGAGGCTCAGCCCCGGCGGCAGCG...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341744.8
CDS-3UTR GCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGACGGTTCAGTTCCAGCTaGTGCTCGGGGTCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: KYRVLRSGDVGARPACHGRFSSS*CSGSRS
Trigger: GCTTCGGGACCCCGAGCAGCAGCTGGAACTGAACCG...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAACTTCCTAGGGTCCAGTaGGGCAGTTACCGCACCTGC +
Preference number: 4 (lower is better)
Translates to: GLSADSTGAHPLPSGDSELPRVQ*GSYRTC
Trigger: GCAGGTGCGGTAACTGCCGCACTGGACCCTAGGAAG...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTAGCCACTGGCCCCGGTaGGTCCCAAAGCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSSHWPR*VPKPHP
Trigger: GGGGTGGGGCTTTGGGACCCACCGGGGCCAGTGGCT...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAAGGAGGGGGTAGCAGCTaGGAGTCTGCTCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GLSADSTGAHPLPSGDSEGGGSS*ESALPA
Trigger: AGCTGGAAGAGCAGACTCCCAGCTGCTACCCCCTCC...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAAGCAGGAGCCCTTGGTaGACCCTGGGAGGGGATACC +
Preference number: 4 (lower is better)
Translates to: KYRVLRSGDVGARPACHGSRSPW*TLGGDT
Trigger: GGTATCCCCTCCCAGGGTCCACCAAGGGCTCCTGCT...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAACCAGAGACAACCTGCTaGCTGTCTTGGGATGCGCCC +
Preference number: 4 (lower is better)
Translates to: GLSADSTGAHPLPSGDSEPETTC*LSWDAP
Trigger: GGGCGCATCCCAAGACAGCCAGCAGGTTGTCTCTGG...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTCCGGGTAGTGGCCGATaGCCTCGCTGTAGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSPGSGR*PRCRWA
Trigger: CGCCCACCTACAGCGAGGTCATCGGCCACTACCCGG...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCCCAGTCCCAGGTGAGTaGGGCACTGTCCGGGAACGT +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIPVPGE*GTVRER
Trigger: ACGTTCCCGGACAGTGCCTCACTCACCTGGGACTGG...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCTGTCCTCAAGCCGGCTaGGGGCAGCAACCACTCTCC +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQICPQAG*GQQPLS
Trigger: GGAGAGTGGTTGCTGCCCTCAGCCGGCTTGAGGACA...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAAGGAACGGCAGACCCCTaGAACGAAGCTTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: GLSADSTGAHPLPSGDSEGTADP*NEACPL
Trigger: AAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCC...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCGGTTCTGTTTGGGGGTaGGCGCACCGACTCCCGGTT +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIGSVWG*AHRLPV
Trigger: AACCGGGAGTCGGTGCGCGCACCCCCAAACAGAACC...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGTGGAAGCGCTCCCGCTaGGCGAAGGGCGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQWKRSR*AKGGTA
Trigger: GGCCGTGCCGCCCTTCGCCCAGCGGGAGCGCTTCCA...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATAGCCACTGGCCCCGGTaGGTCCCAAAGCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHSHWPR*VPKPHP
Trigger: GGGGTGGGGCTTTGGGACCCACCGGGGCCAGTGGCT...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCGCCCTTGGTGGACCCTaGGAGGGGATACCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIALGGP*EGIPVP
Trigger: TGGGACTGGTATCCCCTCCCAGGGTCCACCAAGGGC...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCATACGCAGCGGGGACGTaGGTGCGCGCCCCGCATGCC +
Preference number: 4 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSYAAGT*VRAPHA
Trigger: GGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTA...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCGCAGCTCGGGGATCATaGCCCACTGAACCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIAARGS*PTEPPS
Trigger: GCTTGGGGGTTCAGTGGGCCATGATCCCCGAGCTGC...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGGGGCTCCTCCCCGTCTaGCAGCGAGATGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGGLLPV*QRDGGW
Trigger: CCACCCACCATCTCGCTGTCAGACGGGGAGGAGCCC...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATCCGGGTAGTGGCCGATaGCCTCGCTGTAGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHPGSGR*PRCRWA
Trigger: CGCCCACCTACAGCGAGGTCATCGGCCACTACCCGG...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAGAGGCCACTACCCCATaGACTTCTGCCATCCACTGG +
Preference number: 4 (lower is better)
Translates to: KYRVLRSGDVGARPACHGEATTP*TSAIHW
Trigger: CCAGTGGATGGCAGAAGTTCATGGGGTAGTGGCCTC...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAGGAACGGCAGACCCCTaGAACGAAGCTTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: KYRVLRSGDVGARPACHGGTADP*NEACPL
Trigger: AAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCC...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAAGCTCTCCCCCAGCCCTaGTTTTTGCTACATATGGGG +
Preference number: 4 (lower is better)
Translates to: GLSADSTGAHPLPSGDSEALPQP*FLLHMG
Trigger: CCCCATATGTAGCAAAAATCAGGGCTGGGGGAGAGC...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCGGTTCTGTTTGGGGGTaGGCGCACCGACTCCCGGTT +
Preference number: 4 (lower is better)
Translates to: VDWHPNTESYAAGTWVRAGSVWG*AHRLPV
Trigger: AACCGGGAGTCGGTGCGCGCACCCCCAAACAGAACC...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAAACCACCAAAGCGCCCTaGAGAGACAAGTCATCGAGC +
Preference number: 4 (lower is better)
Translates to: GLSADSTGAHPLPSGDSETTKAP*RDKSSS
Trigger: GCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGT...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAAAGCCCCACCCCTCATaGTCTCCTCTGGTCACCTCT +
Preference number: 4 (lower is better)
Translates to: KYRVLRSGDVGARPACHGKPHPS*SPLVTS
Trigger: AGAGGTGACCAGAGGAGAGCATGAGGGGTGGGGCTT...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAACCCACGTCTGTCAGCTaGCACCTTCGTAAAGCACAC +
Preference number: 4 (lower is better)
Translates to: GLSADSTGAHPLPSGDSEPTSVS*HLRKAH
Trigger: GTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGG...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCCTGGCTGTCTTGGGATaGGCCCAGCCTTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQILAVLG*AQPLRG
Trigger: GCCTCTCAAAGGCTGGGCGCATCCCAAGACAGCCAG...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCTCTCTCCTCCGCCCCTaGCTGTGCCGGCTGATGAAG +
Preference number: 4 (lower is better)
Translates to: VDWHPNTESYAAGTWVRASLLRP*LCRLMK
Trigger: CTTCATCAGCCGGCACAGCCAGGGGCGGAGGAGAGA...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGGCGCGATGTGTGTGTaGTGGAGCCGGGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHGAMCV*WSRVPS
Trigger: GGAGGGGACCCGGCTCCACCACACACACATCGCGCC...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTACTCTGCAGGGACAGTaGCCCCTCGGGAAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSTLQGQ*PLGKAR
Trigger: GCGGGCTTTCCCGAGGGGCCACTGTCCCTGCAGAGT...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCAGTCATCGAGCCCTCTaGCATGTCCCTGGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQISHRAL*HVPGSP
Trigger: CGGGCTACCAGGGACATGCCAGAGGGCTCGATGACT...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCCCTGGTAGCCAGCAGGAGCCCTTGGTaGACCCTGGGAGGGGATACC +
Preference number: 4 (lower is better)
Translates to: QSALQRQVIEPSGMSLVASRSPW*TLGGDT
Trigger: GGTATCCCCTCCCAGGGTCCACCAAGGGCTCCTGCT...GGCTACCAGGGACATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAAGTCTCAGCCTGGCTTTaGGCTGACACCATGCACACA +
Preference number: 4 (lower is better)
Translates to: GLSADSTGAHPLPSGDSEVSAWL*ADTMHT
Trigger: TGTGTGCATGGTGTCAGCCCAAAGCCAGGCTGAGAC...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTCCTGCACAGGCACAGTaGTGCTGCCAGAGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSPAQAQ*CCQSSP
Trigger: GGGAGAGCTCTGGCAGCATCACTGTGCCTGTGCAGG...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265626.8
CDS-3UTR TCA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCAGGGCTCCTCCCCGTCTaGCAGCGAGATGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSGLLPV*QRDGGW
Trigger: CCACCCACCATCTCGCTGTCAGACGGGGAGGAGCCC...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTCGTAGCACGTGGCGCTaGTGCCCGAGTTACTGCTGG +
Preference number: 4 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSRSTWR*CPSYCW
Trigger: CCAGCAGTAACTCGGGCATCAGCGCCACGTGCTACG...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCCCTGGTAGCCGATACCAGTCCCAGGTaGGTGAGGCACTGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: QSALQRQVIEPSGMSLVADTSPR*VRHCPG
Trigger: TCCCGGACAGTGCCTCACTCACCTGGGACTGGTATC...GGCTACCAGGGACATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCCCTGGTAGCCGGGATCATGGCCCACTaGACCCCCAAGCGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: QSALQRQVIEPSGMSLVAGIMAH*TPKRFH
Trigger: GTGAAAGCGCTTGGGGGTTCAGTGGGCCATGATCCC...GGCTACCAGGGACATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCCCTGGTAGCCTTCAGTTCCAGCTGCTaGTCGGGGTCCCGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: QSALQRQVIEPSGMSLVAFSSSC*SGSRSW
Trigger: CCAGCTTCGGGACCCCGAGCAGCAGCTGGAACTGAA...GGCTACCAGGGACATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGGGCGGCCCACTGCTCTaGTGGTGCTGGAAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGGGPLL*WCWKED
Trigger: GTCCTCCTTCCAGCACCAGCAGAGCAGTGGGCCGCC...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCCCTGGTAGCCACTAGGCTGGCGGCATaGAGAGCCCACGTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: QSALQRQVIEPSGMSLVATRLAA*RAHVCQ
Trigger: CTGACAGACGTGGGCTCTGCATGCCGCCAGCCTAGT...GGCTACCAGGGACATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAATTTCCAGAGACAACCTaGTGGCTGTCTTGGGATGCG +
Preference number: 4 (lower is better)
Translates to: GLSADSTGAHPLPSGDSEFPETT*WLSWDA
Trigger: CGCATCCCAAGACAGCCAGCAGGTTGTCTCTGGAAA...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACATGGAAGCGCTCCCGCTaGGCGAAGGGCGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTWKRSR*AKGGTA
Trigger: GGCCGTGCCGCCCTTCGCCCAGCGGGAGCGCTTCCA...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCCCTGGTAGCCGCAGGTACGGATAGGTaGGCTGGAAGCGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: QSALQRQVIEPSGMSLVAAGTDR*AGSGGS
Trigger: GCTTCCACCGCTTCCAGCCCACCTATCCGTACCTGC...GGCTACCAGGGACATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCCGTCTGACAGCGAGATaGTGGGTGGCAGGTCGATCT +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIRLTAR*WVAGRS
Trigger: AGATCGACCTGCCACCCACCATCTCGCTGTCAGACG...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGGCCCACTGCTCTGCTaGTGCTGGAAGGAGGACCCC +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHGPLLC*CWKEDP
Trigger: GGGGTCCTCCTTCCAGCACCAGCAGAGCAGTGGGCC...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGGGCCCACTGCTCTGCTaGTGCTGGAAGGAGGACCCC +
Preference number: 4 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGGPLLC*CWKEDP
Trigger: GGGGTCCTCCTTCCAGCACCAGCAGAGCAGTGGGCC...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGGCGATGTGTGTGTGGTaGAGCCGGGTCCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGAMCVW*SRVPSS
Trigger: GCTGGAGGGGACCCGGCTCCACCACACACACATCGC...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTTCAAGCTCCAGCCACTaGCCCCGGTGGGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSSSSSH*PRWVPK
Trigger: CTTTGGGACCCACCGGGGCCAGTGGCTGGAGCTTGA...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCAGCTCCGCCATTGCCTaGTTTCGCAGGAGACTGTCC +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQISSAIA*FRRRLS
Trigger: GGACAGTCTCCTGCGAAACCAGGCAATGGCGGAGCT...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347215.8
CDS-3UTR TCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACCGTAGCACGTGGCGCTaGTGCCCGAGTTACTGCTGG +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHRSTWR*CPSYCW
Trigger: CCAGCAGTAACTCGGGCATCAGCGCCACGTGCTACG...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATCGTAGCACGTGGCGCTaGTGCCCGAGTTACTGCTGG +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHRSTWR*CPSYCW
Trigger: CCAGCAGTAACTCGGGCATCAGCGCCACGTGCTACG...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAAGTGAGAATTGATCCGTaGAGGGAAACAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: GLSADSTGAHPLPSGDSEVRIDP*RETDRR
Trigger: CCTCCTGTCTGTTTCCCTTCACGGATCAATTCTCAC...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAACACGTTTCACATGCATaGGCTCGAGTGGCTAGAACT +
Preference number: 4 (lower is better)
Translates to: GLSADSTGAHPLPSGDSEHVSHA*ARVART
Trigger: AGTTCTAGCCACTCGAGCTCATGCATGTGAAACGTG...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTGATACCAGTCCCAGGTaGGTGAGGCACTGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSDTSPR*VRHCPG
Trigger: TCCCGGACAGTGCCTCACTCACCTGGGACTGGTATC...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGTCCTCAAGCCGGCTaGGGGCAGCAACCACTCTCC +
Preference number: 4 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGCPQAG*GQQPLS
Trigger: GGAGAGTGGTTGCTGCCCTCAGCCGGCTTGAGGACA...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACTGTCCTCAAGCCGGCTaGGGGCAGCAACCACTCTCC +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHCPQAG*GQQPLS
Trigger: GGAGAGTGGTTGCTGCCCTCAGCCGGCTTGAGGACA...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAGCTGATGAAGGACCGTaGAGACAGCTTGTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: KYRVLRSGDVGARPACHGADEGP*RQLVVA
Trigger: AGCCACTACAAGCTGTCTGCACGGTCCTTCATCAGC...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTTTCAGTTCCAGCTGCTaGTCGGGGTCCCGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSFSSSC*SGSRSW
Trigger: CCAGCTTCGGGACCCCGAGCAGCAGCTGGAACTGAA...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACGGTTCTGTTTGGGGGTaGGCGCACCGACTCCCGGTT +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHGSVWG*AHRLPV
Trigger: AACCGGGAGTCGGTGCGCGCACCCCCAAACAGAACC...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGCCACTGCTCTGCTGGTaGTGGAAGGAGGACCCCGGG +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQPLLCW*WKEDPG
Trigger: CCCGGGGTCCTCCTTCCAGCACCAGCAGAGCAGTGG...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCAGGCGGCCCACTGCTCTaGTGGTGCTGGAAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSGGPLL*WCWKED
Trigger: GTCCTCCTTCCAGCACCAGCAGAGCAGTGGGCCGCC...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATCGGGGGCTCACCCTCTaGCGTCAGGCGACTCTGAAA +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHRGLTL*RQATLK
Trigger: TTTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCG...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTCTTCCTAGGGTCCAGTaGGGCAGTTACCGCACCTGC +
Preference number: 4 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSLPRVQ*GSYRTC
Trigger: GCAGGTGCGGTAACTGCCGCACTGGACCCTAGGAAG...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAAGGAGGAGGTCAGATTaGGAATACCTGGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KYRVLRSGDVGARPACHGRRRSD*EYLGLP
Trigger: AGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCAAGCCCCACCCCTCATaGTCTCCTCTGGTCACCTCT +
Preference number: 4 (lower is better)
Translates to: VDWHPNTESYAAGTWVRAKPHPS*SPLVTS
Trigger: AGAGGTGACCAGAGGAGAGCATGAGGGGTGGGGCTT...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTCTCTCCTCCGCCCCTaGCTGTGCCGGCTGATGAAG +
Preference number: 4 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGSLLRP*LCRLMK
Trigger: CTTCATCAGCCGGCACAGCCAGGGGCGGAGGAGAGA...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCGAAGATGGTTCTGTTTaGGGGTGCGCGCACCGACTC +
Preference number: 4 (lower is better)
Translates to: VDWHPNTESYAAGTWVRAEDGSV*GCAHRL
Trigger: GAGTCGGTGCGCGCACCCCCAAACAGAACCATCTTC...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCAGGCCCACTGCTCTGCTaGTGCTGGAAGGAGGACCCC +
Preference number: 4 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSGPLLC*CWKEDP
Trigger: GGGGTCCTCCTTCCAGCACCAGCAGAGCAGTGGGCC...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCTCTCTTTGCTCCAGATaGCTGCGCTCTCTAGGGGCG +
Preference number: 4 (lower is better)
Translates to: VDWHPNTESYAAGTWVRASLCSR*LRSLGA
Trigger: CGCCCCTAGAGAGCGCAGCCATCTGGAGCAAAGAGA...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATAAAGCCCGCCGCTCCTaGCCAAGGCCTCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHKARRS*PRPLCR
Trigger: TCTGCAGAGAGGCCTTGGCCAGGAGCGGCGGGCTTT...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGAGCCACTGGCCCCGGTaGGTCCCAAAGCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTESHWPR*VPKPHP
Trigger: GGGGTGGGGCTTTGGGACCCACCGGGGCCAGTGGCT...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGAGCCACTGGCCCCGGTaGGTCCCAAAGCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWSHWPR*VPKPHP
Trigger: GGGGTGGGGCTTTGGGACCCACCGGGGCCAGTGGCT...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACTCAAGCTCCAGCCACTaGCCCCGGTGGGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHSSSSH*PRWVPK
Trigger: CTTTGGGACCCACCGGGGCCAGTGGCTGGAGCTTGA...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATAGCAGGAGCCCTTGGTaGACCCTGGGAGGGGATACC +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHSRSPW*TLGGDT
Trigger: GGTATCCCCTCCCAGGGTCCACCAAGGGCTCCTGCT...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCAGGACTGTCTCAGCCTaGCTTTGGGCTGACACCATG +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIRTVSA*LWADTM
Trigger: CATGGTGTCAGCCCAAAGCCAGGCTGAGACAGTCCT...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTCCAGAGACAACCTGCTaGCTGTCTTGGGATGCGCCC +
Preference number: 4 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSPETTC*LSWDAP
Trigger: GGGCGCATCCCAAGACAGCCAGCAGGTTGTCTCTGG...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGGTCCGGAAAATGGGCTaGCAGCGGGGCGCGCGCTGC +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWVRKMG*QRGARC
Trigger: GCAGCGCGCGCCCCGCTGCCAGCCCATTTTCCGGAC...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341744.8
CDS-3UTR CCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCAACGTGCAGGAGACATTaGGCTGCCCGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: QRRAVPTPGTNVKALESATCRRH*AARRRR
Trigger: CCGCCGCCGCCGGGCAGCCCAATGTCTCCTGCACGT...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341744.8
3UTR CAA 72 bp ACTCTGGTCGTTTCCAGAGACAACCTGCTGGCTGTCTaGGGATGCGCCCAGCCTTTGAGAGGCCACTACCCC +
Preference number: 4 (lower is better)
Translates to: TLVVSRDNLLAV*GCAQPLRGHYP
Trigger: GGGGTAGTGGCCTCTCAAAGGCTGGGCGCATCCCAAGACAGCCAGCAGGTTGTCTCTGGAAACGACCAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACTGGGATTCCGTTGCCTaGCACTGTGCTCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHWDSVA*HCALRG
Trigger: CCCTCGGAGAGCACAGTGTCAGGCAACGGAATCCCA...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGGGGCTCCTCCCCGTCTaGCAGCGAGATGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEGLLPV*QRDGGW
Trigger: CCACCCACCATCTCGCTGTCAGACGGGGAGGAGCCC...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCCCTGGTAGCCGCCGTCAGGCGACTCTaGAATTCCGACATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QSALQRQVIEPSGMSLVAAVRRL*NSDISP
Trigger: GGGAGAAATGTCGGAATTTCAGAGTCGCCTGACGGC...GGCTACCAGGGACATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCACCTGCCTTCACCGGTaGACCTTTAGCCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: VDWHPNTESYAAGTWVRATCLHR*TFSQLN
Trigger: GTTCAGCTGGCTAAAGGTTCACCGGTGAAGGCAGGT...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCAAGGGGAAGAGAAGGTaGAGAATTCTGCGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIKGKRR*RILRPK
Trigger: CTTCGGGCGCAGAATTCTTCACCTTCTCTTCCCCTT...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAACGGGATAACCTGTACTaGTTTCTCTGCAGGACCTTT +
Preference number: 4 (lower is better)
Translates to: GLSADSTGAHPLPSGDSERDNLY*FLCRTF
Trigger: AAAGGTCCTGCAGAGAAATCAGTACAGGTTATCCCG...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAAATCCAGACCATACCATaGAGCAACGAGACCCAAACA +
Preference number: 4 (lower is better)
Translates to: GLSADSTGAHPLPSGDSEIQTIP*SNETQT
Trigger: TGTTTGGGTCTCGTTGCTTCATGGTATGGTCTGGAT...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCCGCCAGGAACCAACGTaGAAGCATTGGAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIRQEPT*KHWNQH
Trigger: GTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCG...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAACGATGATGATGATCTaGACAAACTCCAGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: KYRVLRSGDVGARPACHGTMMMI*TNSSSA
Trigger: GGCGGAGCTGGAGTTTGTTCAGATCATCATCATCGT...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347215.8
CDS-3UTR GCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATTTCAGTTCCAGCTGCTaGTCGGGGTCCCGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHFSSSC*SGSRSW
Trigger: CCAGCTTCGGGACCCCGAGCAGCAGCTGGAACTGAA...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGGGTTCTGTTTGGGGGTaGGCGCACCGACTCCCGGTT +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQGSVWG*AHRLPV
Trigger: AACCGGGAGTCGGTGCGCGCACCCCCAAACAGAACC...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACCAGAAGCATCCACTCTaGAGGGACAGTGGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHQKHPL*RDSGPS
Trigger: CGAGGGGCCACTGTCCCTGCAGAGTGGATGCTTCTG...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCAGGAGGAGGTCAGATTaGGAATACCTGGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIRRRSD*EYLGLP
Trigger: AGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCCACGTCTGTCAGCTaGCACCTTCGTAAAGCACAC +
Preference number: 4 (lower is better)
Translates to: VDWHPNTESYAAGTWVRAPTSVS*HLRKAH
Trigger: GTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGG...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACACTAGGCTGGCGGCATaGAGAGCCCACGTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHTRLAA*RAHVCQ
Trigger: CTGACAGACGTGGGCTCTGCATGCCGCCAGCCTAGT...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGACGACGGGAGTGTCACTaGTTCTTCAGTAAGGCACTA +
Preference number: 4 (lower is better)
Translates to: KYRVLRSGDVGARPACHGRRECH*FFSKAL
Trigger: TAGTGCCTTACTGAAGAAGCAGTGACACTCCCGTCG...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAGGAACAAAGAGCGTTTaGAGTTGCACGTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: KYRVLRSGDVGARPACHGGTKSV*SCTCRR
Trigger: TCTCCTGCACGTGCAACTGCAAACGCTCTTTGTTCC...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341744.8
CDS-3UTR CCA 90 bp CAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCCCTGGTAGCCGGATGTGGCTCAGGCTaGTCCAAGCTCTTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: QSALQRQVIEPSGMSLVAGCGSG*SKLFGG
Trigger: TCCTCCAAAGAGCTTGGACCAGCCTGAGCCACATCC...GGCTACCAGGGACATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265626.8
CDS-3UTR CCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCAGGAGGCTTGTTCTaGAGAAGTCAAGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VDWHPNTESYAAGTWVRAPGGLF*RSQAQG
Trigger: TCCCTGGGCTTGACTTCTCCAGAACAAGCCTCCTGG...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265626.8
CDS-3UTR CCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGGGCGCGATGTGTGTGTaGTGGAGCCGGGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWGAMCV*WSRVPS
Trigger: GGAGGGGACCCGGCTCCACCACACACACATCGCGCC...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCATCAAGCTCCAGCCACTaGCCCCGGTGGGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSSSSSH*PRWVPK
Trigger: CTTTGGGACCCACCGGGGCCAGTGGCTGGAGCTTGA...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGGCCCTTGGTGGACCCTaGGAGGGGATACCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQALGGP*EGIPVP
Trigger: TGGGACTGGTATCCCCTCCCAGGGTCCACCAAGGGC...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGAGCAGGAGCCCTTGGTaGACCCTGGGAGGGGATACC +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQSRSPW*TLGGDT
Trigger: GGTATCCCCTCCCAGGGTCCACCAAGGGCTCCTGCT...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAACATCTAACTTCCTACTaGAAAAGAGGGCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GLSADSTGAHPLPSGDSEHLTSY*KRGPPQ
Trigger: CTGAGGAGGCCCTCTTTTCCAGTAGGAAGTTAGATG...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAGGCAGTGCCCGCGGGTaGCGTCCGGAAAATGGGCTG +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTGSARG*RPENGL
Trigger: CAGCCCATTTTCCGGACGCCACCCGCGGGCACTGCC...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341744.8
CDS-3UTR CCA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCAGCAGCTCGGGGATCATaGCCCACTGAACCCCCAAGC +
Preference number: 4 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSAARGS*PTEPPS
Trigger: GCTTGGGGGTTCAGTGGGCCATGATCCCCGAGCTGC...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAACGATGATGATGATCTaGACAAACTCCAGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: KYRVLRSGDVGARPACHGTMMMI*TNSSSA
Trigger: AGCGGAGCTGGAGTTTGTTCAGATCATCATCATCGT...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265626.8
ENST00000395816.7
CDS-3UTR TCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTCCACAGGCATCCTTCTaGGGACAGGGCATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSPQASF*GQGIFS
Trigger: AGAGAAGATGCCCTGTCCTCAGAAGGATGCCTGTGG...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAAGGGCTCCTCCCCGTCTaGCAGCGAGATGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RECHCFFSKALETRHIKEGLLPV*QRDGGW
Trigger: CCACCCACCATCTCGCTGTCAGACGGGGAGGAGCCC...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAACCCAAATCTATCTGGTaGAAACCTGGAGAACAAGAG +
Preference number: 4 (lower is better)
Translates to: GLSADSTGAHPLPSGDSEPKSIW*KPGEQE
Trigger: CTCTTGTTCTCCAGGTTTTCACCAGATAGATTTGGG...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCCACGTTTCACATGCATaGGCTCGAGTGGCTAGAACT +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIHVSHA*ARVART
Trigger: AGTTCTAGCCACTCGAGCTCATGCATGTGAAACGTG...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCAGATACCAGTCCCAGGTaGGTGAGGCACTGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSDTSPR*VRHCPG
Trigger: TCCCGGACAGTGCCTCACTCACCTGGGACTGGTATC...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACGGAACGGCAGACCCCTaGAACGAAGCTTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHGTADP*NEACPL
Trigger: AAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCC...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCAAATGAGGACAGGGAATaGACCCGGCTCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSNEDRE*TRLSPS
Trigger: GCTGGGGGAGAGCCGGGTTCATTCCCTGTCCTCATT...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACGCTCTGGGATTCCGTTaGCTGACACTGTGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHALGFR*LTLCSP
Trigger: CGGAGAGCACAGTGTCAGGCAACGGAATCCCAGAGC...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACACCACTGCTCTGCTGGTaGTGGAAGGAGGACCCCGGG +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTPLLCW*WKEDPG
Trigger: CCCGGGGTCCTCCTTCCAGCACCAGCAGAGCAGTGG...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGCCACTGCTCTGCTGGTaGTGGAAGGAGGACCCCGGG +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEPLLCW*WKEDPG
Trigger: CCCGGGGTCCTCCTTCCAGCACCAGCAGAGCAGTGG...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCAAGGAGGGCGGCCCACTaGTCTGCTGGTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: QRRAVPTPGTNVKALESARRAAH*SAGAGR
Trigger: CCTTCCAGCACCAGCAGAGCAGTGGGCCGCCCTCCT...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGAGGAGGGCGGCCCACTaGTCTGCTGGTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTERRAAH*SAGAGR
Trigger: CCTTCCAGCACCAGCAGAGCAGTGGGCCGCCCTCCT...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAGTTTATCCTTCTCTTTaGTCCAGATGGCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: KYRVLRSGDVGARPACHGVYPSL*SRWLRS
Trigger: AGAGCGCAGCCATCTGGAGCAAAGAGAAGGATAAAC...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCCCTGGTAGCCAGGAGGAGGTCAGATTaGGAATACCTGGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QSALQRQVIEPSGMSLVARRRSD*EYLGLP
Trigger: AGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT...GGCTACCAGGGACATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACTTCCTGTCCTTCACCTaGACGTCACCAGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHFLSFT*TSPAGP
Trigger: GGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAA...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGACTAGGCTGGCGGCATaGAGAGCCCACGTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQTRLAA*RAHVCQ
Trigger: CTGACAGACGTGGGCTCTGCATGCCGCCAGCCTAGT...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCACTGGCTGTCTTGGGATaGGCCCAGCCTTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSLAVLG*AQPLRG
Trigger: GCCTCTCAAAGGCTGGGCGCATCCCAAGACAGCCAG...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGATGGAAGCGCTCCCGCTaGGCGAAGGGCGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGWKRSR*AKGGTA
Trigger: GGCCGTGCCGCCCTTCGCCCAGCGGGAGCGCTTCCA...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGGCAGGTACGGATAGGTaGGCTGGAAGCGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQAGTDR*AGSGGS
Trigger: GCTTCCACCGCTTCCAGCCCACCTATCCGTACCTGC...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAGCGATGTGTGTGTGGTaGAGCCGGGTCCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTAMCVW*SRVPSS
Trigger: GCTGGAGGGGACCCGGCTCCACCACACACACATCGC...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGGCGATGTGTGTGTGGTaGAGCCGGGTCCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEAMCVW*SRVPSS
Trigger: GCTGGAGGGGACCCGGCTCCACCACACACACATCGC...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAAGGCGCGATGTGTGTGTaGTGGAGCCGGGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RECHCFFSKALETRHIKEGAMCV*WSRVPS
Trigger: GGAGGGGACCCGGCTCCACCACACACACATCGCGCC...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCCCTGGTAGCCCAGATTGCGAATACCTaGGGCTTCCTAGGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: QSALQRQVIEPSGMSLVAQIANT*GFLGSS
Trigger: ACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTG...GGCTACCAGGGACATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCAGATTGCGAATACCTaGGGCTTCCTAGGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: VDWHPNTESYAAGTWVRAQIANT*GFLGSS
Trigger: ACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTG...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCGCCCGAAGCTCGGGTTaGTGTTTGCTCAACTGCTTT +
Preference number: 4 (lower is better)
Translates to: VDWHPNTESYAAGTWVRAARSSG*CLLNCF
Trigger: AAAGCAGTTGAGCAAACACCAACCCGAGCTTCGGGC...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCAGGAGGGGGTAGCAGCTaGGAGTCTGCTCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSGGGSS*ESALPA
Trigger: AGCTGGAAGAGCAGACTCCCAGCTGCTACCCCCTCC...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCGCATTCTGCCCAAAATaGAAAGCCACTCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIAFCPK*KATPMG
Trigger: TCCCATGGGAGTGGCTTTCCATTTTGGGCAGAATGC...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAAGGTTTTCAGCCTAGATaGGAGTCGTGTACAAACCTT +
Preference number: 4 (lower is better)
Translates to: GLSADSTGAHPLPSGDSEGFQPR*ESCTNL
Trigger: AAGGTTTGTACACGACTCCCATCTAGGCTGAAAACC...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CAA 72 bp GACAACCTGCTGGCTGTCTTGGGATGCGCCCAGCCTTaGAGAGGCCACTACCCCATGAACTTCTGCCATCCA +
Preference number: 4 (lower is better)
Translates to: DNLLAVLGCAQP*RGHYPMNFCHP
Trigger: TGGATGGCAGAAGTTCATGGGGTAGTGGCCTCTCAAAGGCTGGGCGCATCCCAAGACAGCCAGCAGGTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATCCACAGGCATCCTTCTaGGGACAGGGCATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHPQASF*GQGIFS
Trigger: AGAGAAGATGCCCTGTCCTCAGAAGGATGCCTGTGG...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACCCACAGGCATCCTTCTaGGGACAGGGCATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHPQASF*GQGIFS
Trigger: AGAGAAGATGCCCTGTCCTCAGAAGGATGCCTGTGG...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGCCGTCAGGCGACTCTaGAATTCCGACATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHAVRRL*NSDISP
Trigger: GGGAGAAATGTCGGAATTTCAGAGTCGCCTGACGGC...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGGAACCTTTAGCCAGCTaGACAACCACCAAAGCGCCC +
Preference number: 4 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGEPLAS*TTTKAP
Trigger: GGGCGCTTTGGTGGTTGTTCAGCTGGCTAAAGGTTC...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACGAACCTTTAGCCAGCTaGACAACCACCAAAGCGCCC +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHEPLAS*TTTKAP
Trigger: GGGCGCTTTGGTGGTTGTTCAGCTGGCTAAAGGTTC...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCACGTTTCACATGCATaGGCTCGAGTGGCTAGAACT +
Preference number: 4 (lower is better)
Translates to: VDWHPNTESYAAGTWVRAHVSHA*ARVART
Trigger: AGTTCTAGCCACTCGAGCTCATGCATGTGAAACGTG...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAAAACAAATTTTAGGCTaGCGACTTCACGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: KYRVLRSGDVGARPACHGKQILG*RLHGEA
Trigger: TGCCTCTCCGTGAAGTCGTCAGCCTAAAATTTGTTT...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGCCAGTCCCAGGTGAGTaGGGCACTGTCCGGGAACGT +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEPVPGE*GTVRER
Trigger: ACGTTCCCGGACAGTGCCTCACTCACCTGGGACTGG...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACTGGCTCAAGAGGATATaGGGACTGTCTCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHWLKRI*GLSQPG
Trigger: GCCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCA...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGTGTCCTCAAGCCGGCTaGGGGCAGCAACCACTCTCC +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWCPQAG*GQQPLS
Trigger: GGAGAGTGGTTGCTGCCCTCAGCCGGCTTGAGGACA...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCACTGGGCTTCAACACTaGGTTGTCATGAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: VDWHPNTESYAAGTWVRATGLQH*VVMRGT
Trigger: TGTCCCTCTCATGACAACTCAGTGTTGAAGCCCAGT...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTGCTGATGAAGGACCGTaGAGACAGCTTGTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSADEGP*RQLVVA
Trigger: AGCCACTACAAGCTGTCTGCACGGTCCTTCATCAGC...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACGTTGCCTGACACTGTaGTCTCCGAGGGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: QRRAVPTPGTNVKALESARCLTL*SPRATG
Trigger: GCCTGTGGCCCTCGGAGAGCACAGTGTCAGGCAACG...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACACGTTGCCTGACACTGTaGTCTCCGAGGGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTRCLTL*SPRATG
Trigger: GCCTGTGGCCCTCGGAGAGCACAGTGTCAGGCAACG...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGGCTCTGGGATTCCGTTaGCTGACACTGTGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQALGFR*LTLCSP
Trigger: CGGAGAGCACAGTGTCAGGCAACGGAATCCCAGAGC...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACGGTTCAGTTCCAGCTaGTGCTCGGGGTCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: QRRAVPTPGTNVKALESARFSSS*CSGSRS
Trigger: GCTTCGGGACCCCGAGCAGCAGCTGGAACTGAACCG...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAACCACTGCTCTGCTGGTaGTGGAAGGAGGACCCCGGG +
Preference number: 4 (lower is better)
Translates to: RECHCFFSKALETRHIKEPLLCW*WKEDPG
Trigger: CCCGGGGTCCTCCTTCCAGCACCAGCAGAGCAGTGG...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTAGGAGGGCGGCCCACTaGTCTGCTGGTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: ETKLVPFQSATSENPHLTRRAAH*SAGAGR
Trigger: CCTTCCAGCACCAGCAGAGCAGTGGGCCGCCCTCCT...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCGTTTATCCTTCTCTTTaGTCCAGATGGCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIVYPSL*SRWLRS
Trigger: AGAGCGCAGCCATCTGGAGCAAAGAGAAGGATAAAC...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACAAGCGCGGAGTGTTCTaGCTTTTCACCTACGCAGCC +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHKRGVF*LFTYAA
Trigger: GGCTGCGTAGGTGAAAAGGCAGAACACTCCGCGCTT...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGCGGGGGCTCACCCTCTaGCGTCAGGCGACTCTGAAA +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTERGLTL*RQATLK
Trigger: TTTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCG...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGTGGCCAAGGCCTCTCTaGAGACTCCACGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEWPRPL*RLHGGS
Trigger: TGAGCCCCCGTGGAGTCTGCAGAGAGGCCTTGGCCA...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGTGGCCAAGGCCTCTCTaGAGACTCCACGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWWPRPL*RLHGGS
Trigger: TGAGCCCCCGTGGAGTCTGCAGAGAGGCCTTGGCCA...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGAAGGTGAAGAATTCTaGGCCCGAAGCTCGGGTTGG +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHEGEEF*ARSSGW
Trigger: CCAACCCGAGCTTCGGGCGCAGAATTCTTCACCTTC...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCCCTGGTAGCCTTTGGGCTGACACCATaGACACACACAAGGTCCACT +
Preference number: 4 (lower is better)
Translates to: QSALQRQVIEPSGMSLVAFGLTP*THTRST
Trigger: AGTGGACCTTGTGTGTGTGCATGGTGTCAGCCCAAA...GGCTACCAGGGACATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGATGTAGAACCGGGCTTTaGAGGGGAGATAATTTTCCT +
Preference number: 4 (lower is better)
Translates to: KYRVLRSGDVGARPACHGCRTGL*RGDNFP
Trigger: AGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACA...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCCCCAGCCCTGATTTTTaGTACATATGGGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIPSPDF*YIWGPF
Trigger: AAAGGGACCCCATATGTAGCAAAAATCAGGGCTGGG...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGTCTCTCCTCCGCCCCTaGCTGTGCCGGCTGATGAAG +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTESLLRP*LCRLMK
Trigger: CTTCATCAGCCGGCACAGCCAGGGGCGGAGGAGAGA...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCTGGAAGCGCTCCCGCTaGGCGAAGGGCGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLWKRSR*AKGGTA
Trigger: GGCCGTGCCGCCCTTCGCCCAGCGGGAGCGCTTCCA...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCAGAAGATGGTTCTGTTTaGGGGTGCGCGCACCGACTC +
Preference number: 4 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSEDGSV*GCAHRL
Trigger: GAGTCGGTGCGCGCACCCCCAAACAGAACCATCTTC...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGGTCACTGTCGAAGATaGTTCTGTTTGGGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHGHCRR*FCLGVR
Trigger: GCGCACCCCCAAACAGAACCATCTTCGACAGTGACC...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACGGTCACTGTCGAAGATaGTTCTGTTTGGGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHGHCRR*FCLGVR
Trigger: GCGCACCCCCAAACAGAACCATCTTCGACAGTGACC...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAAGGCCCACTGCTCTGCTaGTGCTGGAAGGAGGACCCC +
Preference number: 4 (lower is better)
Translates to: RECHCFFSKALETRHIKEGPLLC*CWKEDP
Trigger: GGGGTCCTCCTTCCAGCACCAGCAGAGCAGTGGGCC...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTGCGATGTGTGTGTGGTaGAGCCGGGTCCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ETKLVPFQSATSENPHLTAMCVW*SRVPSS
Trigger: GCTGGAGGGGACCCGGCTCCACCACACACACATCGC...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAAACTCTGCAGGGACAGTaGCCCCTCGGGAAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: RECHCFFSKALETRHIKETLQGQ*PLGKAR
Trigger: GCGGGCTTTCCCGAGGGGCCACTGTCCCTGCAGAGT...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACAACTTTCTACTAGGCTaGCGGCATGCAGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHNFLLG*RHAEPT
Trigger: CGTGGGCTCTGCATGCCGCCAGCCTAGTAGAAAGTT...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCTCAGCCTGGCTTTaGGCTGACACCATGCACACA +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHVSAWL*ADTMHT
Trigger: TGTGTGCATGGTGTCAGCCCAAAGCCAGGCTGAGAC...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATAGGACTGTCTCAGCCTaGCTTTGGGCTGACACCATG +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHRTVSA*LWADTM
Trigger: CATGGTGTCAGCCCAAAGCCAGGCTGAGACAGTCCT...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGTACGCAGCGGGGACGTaGGTGCGCGCCCCGCATGCC +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKYAAGT*VRAPHA
Trigger: GGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTA...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGAGTGGCGTCCGGAAAATaGGCTGGCAGCGGGGCGCGC +
Preference number: 4 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGVASGK*AGSGAR
Trigger: GCGCGCCCCGCTGCCAGCCCATTTTCCGGACGCCAC...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341744.8
3UTR CAA 72 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTaGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCC +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRS*SPSNQPLLRTP
Trigger: GGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGGGCTCAGCAGGCACGTaGTCACCACCACCATCACCA +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWGSAGT*SPPPSP
Trigger: TGGTGATGGTGGTGGTGATCACGTGCCTGCTGAGCC...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCATGGGATTCCGTTGCCTaGCACTGTGCTCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: QRRAVPTPGTNVKALESAWDSVA*HCALRG
Trigger: CCCTCGGAGAGCACAGTGTCAGGCAACGGAATCCCA...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCAACCTGCCTTCACCGGTaGACCTTTAGCCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSTCLHR*TFSQLN
Trigger: GTTCAGCTGGCTAAAGGTTCACCGGTGAAGGCAGGT...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGACTCTTAAGTGAGAATTaGTCCGTGAAGGGAAACAGA +
Preference number: 4 (lower is better)
Translates to: KYRVLRSGDVGARPACHGLLSEN*SVKGNR
Trigger: TCTGTTTCCCTTCACGGATCAATTCTCACTTAAGAG...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCAAACAAATTTTAGGCTaGCGACTTCACGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIKQILG*RLHGEA
Trigger: TGCCTCTCCGTGAAGTCGTCAGCCTAAAATTTGTTT...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACACTGGTAGAGACAGGGTaGGGACGCGCGAGGATGATG +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTLVETG*GRARMM
Trigger: CATCATCCTCGCGCGTCCTCACCCTGTCTCTACCAG...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACTGGTAGAGACAGGGTaGGGACGCGCGAGGATGATG +
Preference number: 4 (lower is better)
Translates to: QRRAVPTPGTNVKALESALVETG*GRARMM
Trigger: CATCATCCTCGCGCGTCCTCACCCTGTCTCTACCAG...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTACTGGGCTTCAACACTaGGTTGTCATGAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSTGLQH*VVMRGT
Trigger: TGTCCCTCTCATGACAACTCAGTGTTGAAGCCCAGT...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGACGCTCGGCCTTCTCTaGACCAGGATGGAACGGCAG +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWTLGLL*TRMERQ
Trigger: CTGCCGTTCCATCCTGGTTCAGAGAAGGCCGAGCGT...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGGGTTCCCGCTCTCCCTaGACAGGCACAGTGATGCTG +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEGSRSP*TGTVML
Trigger: CAGCATCACTGTGCCTGTGCAGGGAGAGCGGGAACC...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265626.8
CDS-3UTR GCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGTTCAGTTCCAGCTGCTaGTCGGGGTCCCGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEFSSSC*SGSRSW
Trigger: CCAGCTTCGGGACCCCGAGCAGCAGCTGGAACTGAA...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCGTTTATCCTTCTCTTTaGTCCAGATGGCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: VDWHPNTESYAAGTWVRAVYPSL*SRWLRS
Trigger: AGAGCGCAGCCATCTGGAGCAAAGAGAAGGATAAAC...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAATGGCCAAGGCCTCTCTaGAGACTCCACGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RECHCFFSKALETRHIKEWPRPL*RLHGGS
Trigger: TGAGCCCCCGTGGAGTCTGCAGAGAGGCCTTGGCCA...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAGAAGCATCCACTCTaGAGGGACAGTGGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: QRRAVPTPGTNVKALESAQKHPL*RDSGPS
Trigger: CGAGGGGCCACTGTCCCTGCAGAGTGGATGCTTCTG...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCAGAAGGTGAAGAATTCTaGGCCCGAAGCTCGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSEGEEF*ARSSGW
Trigger: CCAACCCGAGCTTCGGGCGCAGAATTCTTCACCTTC...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTCGACGGGAGTGTCACTaGTTCTTCAGTAAGGCACTA +
Preference number: 4 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSRRECH*FFSKAL
Trigger: TAGTGCCTTACTGAAGAAGCAGTGACACTCCCGTCG...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACACTGGCTGTCTTGGGATaGGCCCAGCCTTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTLAVLG*AQPLRG
Trigger: GCCTCTCAAAGGCTGGGCGCATCCCAAGACAGCCAG...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATTTTCCAGAGACAACCTaGTGGCTGTCTTGGGATGCG +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHFPETT*WLSWDA
Trigger: CGCATCCCAAGACAGCCAGCAGGTTGTCTCTGGAAA...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCAGGTCACTGTCGAAGATaGTTCTGTTTGGGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSGHCRR*FCLGVR
Trigger: GCGCACCCCCAAACAGAACCATCTTCGACAGTGACC...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGAGGCGCGATGTGTGTGTaGTGGAGCCGGGTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGGAMCV*WSRVPS
Trigger: GGAGGGGACCCGGCTCCACCACACACACATCGCGCC...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTTCAAGCTCCAGCCACTaGCCCCGGTGGGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: ETKLVPFQSATSENPHLTSSSSH*PRWVPK
Trigger: CTTTGGGACCCACCGGGGCCAGTGGCTGGAGCTTGA...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGGGAGGGGGTAGCAGCTaGGAGTCTGCTCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEGGGSS*ESALPA
Trigger: AGCTGGAAGAGCAGACTCCCAGCTGCTACCCCCTCC...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAATGCATGAGCTCGAGTaGCTAGAACTTCAAAACTGT +
Preference number: 4 (lower is better)
Translates to: KYRVLRSGDVGARPACHGMHELE*LELQNC
Trigger: ACAGTTTTGAAGTTCTAGCCACTCGAGCTCATGCAT...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCGGTTTTCAGCCTAGATaGGAGTCGTGTACAAACCTT +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIGFQPR*ESCTNL
Trigger: AAGGTTTGTACACGACTCCCATCTAGGCTGAAAACC...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGGTCTCAGCCTGGCTTTaGGCTGACACCATGCACACA +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQVSAWL*ADTMHT
Trigger: TGTGTGCATGGTGTCAGCCCAAAGCCAGGCTGAGAC...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGACGACGGGATATTTTATaGTTCTGGAAGCTTCGTGTT +
Preference number: 4 (lower is better)
Translates to: KYRVLRSGDVGARPACHGRRDIL*FWKLRV
Trigger: AACACGAAGCTTCCAGAACCATAAAATATCCCGTCG...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGAAACTCCAGCTCCGCTaGTTTCGCAGGAGACTGTCC +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQKLQLR*FRRRLS
Trigger: GGACAGTCTCCTGCGAAACCAGCGGAGCTGGAGTTT...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395816.7
CDS-3UTR TCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTCGGGATAACCTGTACTaGTTTCTCTGCAGGACCTTT +
Preference number: 4 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSRDNLY*FLCRTF
Trigger: AAAGGTCCTGCAGAGAAATCAGTACAGGTTATCCCG...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAACTGGTAGAGACAGGGTaGGGACGCGCGAGGATGATG +
Preference number: 4 (lower is better)
Translates to: RECHCFFSKALETRHIKELVETG*GRARMM
Trigger: CATCATCCTCGCGCGTCCTCACCCTGTCTCTACCAG...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAGAGGCCACTACCCCATaGACTTCTGCCATCCACTGG +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTEATTP*TSAIHW
Trigger: CCAGTGGATGGCAGAAGTTCATGGGGTAGTGGCCTC...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACCCAATCAGCCACTTCTaGGAACCCCCATCTAACTTC +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHPISHF*EPPSNF
Trigger: GAAGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGG...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTCTTCCTAGGGTCCAGTaGGGCAGTTACCGCACCTGC +
Preference number: 4 (lower is better)
Translates to: ETKLVPFQSATSENPHLTLPRVQ*GSYRTC
Trigger: GCAGGTGCGGTAACTGCCGCACTGGACCCTAGGAAG...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAACTTCCTAGGGTCCAGTaGGGCAGTTACCGCACCTGC +
Preference number: 4 (lower is better)
Translates to: RECHCFFSKALETRHIKELPRVQ*GSYRTC
Trigger: GCAGGTGCGGTAACTGCCGCACTGGACCCTAGGAAG...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCGCTCGGGTTGGTGTTTaGTCAACTGCTTTACTCATT +
Preference number: 4 (lower is better)
Translates to: VDWHPNTESYAAGTWVRAARVGV*STALLI
Trigger: AATGAGTAAAGCAGTTGAGCAAACACCAACCCGAGC...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCCCTGGTAGCCGCTCGGGTTGGTGTTTaGTCAACTGCTTTACTCATT +
Preference number: 4 (lower is better)
Translates to: QSALQRQVIEPSGMSLVAARVGV*STALLI
Trigger: AATGAGTAAAGCAGTTGAGCAAACACCAACCCGAGC...GGCTACCAGGGACATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACATTCCTGTCCTTCACCTaGACGTCACCAGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTFLSFT*TSPAGP
Trigger: GGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAA...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCAAAGCCCCACCCCTCATaGTCTCCTCTGGTCACCTCT +
Preference number: 4 (lower is better)
Translates to: QRRAVPTPGTNVKALESAKPHPS*SPLVTS
Trigger: AGAGGTGACCAGAGGAGAGCATGAGGGGTGGGGCTT...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTTACCCCATGAACTTCTaGCATCCACTGGACATGAAG +
Preference number: 4 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSYPMNF*HPLDMK
Trigger: CTTCATGTCCAGTGGATGGCAGAAGTTCATGGGGTA...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCCCTGGTAGCCTGTAGAACCGGGCTTTaGAGGGGAGATAATTTTCCT +
Preference number: 4 (lower is better)
Translates to: QSALQRQVIEPSGMSLVACRTGL*RGDNFP
Trigger: AGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACA...GGCTACCAGGGACATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGCTGGTCCAAGCTCTTTaGAGGAGTCCAAGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWLVQAL*RSPSVP
Trigger: GGGCACGCTTGGACTCCTCCAAAGAGCTTGGACCAG...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265626.8
CDS-3UTR CCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTGCAGGTACGGATAGGTaGGCTGGAAGCGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: ETKLVPFQSATSENPHLTAGTDR*AGSGGS
Trigger: GCTTCCACCGCTTCCAGCCCACCTATCCGTACCTGC...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGCTGACAGCGAGATGGTaGGTGGCAGGTCGATCTCGT +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTELTARW*VAGRSR
Trigger: ACGAGATCGACCTGCCACCCACCATCTCGCTGTCAG...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGCGTCTGACAGCGAGATaGTGGGTGGCAGGTCGATCT +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWRLTAR*WVAGRS
Trigger: AGATCGACCTGCCACCCACCATCTCGCTGTCAGACG...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGTCTCTTTGCTCCAGATaGCTGCGCTCTCTAGGGGCG +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWSLCSR*LRSLGA
Trigger: CGCCCCTAGAGAGCGCAGCCATCTGGAGCAAAGAGA...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGTCTCTTTGCTCCAGATaGCTGCGCTCTCTAGGGGCG +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTESLCSR*LRSLGA
Trigger: CGCCCCTAGAGAGCGCAGCCATCTGGAGCAAAGAGA...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGAACTCTGCAGGGACAGTaGCCCCTCGGGAAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGTLQGQ*PLGKAR
Trigger: GCGGGCTTTCCCGAGGGGCCACTGTCCCTGCAGAGT...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGGGCAAAACCACTACCTaGAACTCGGTGCCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEGKTTT*NSVPPW
Trigger: CCACGGAGGCACCGAGTTCCAGGTAGTGGTTTTGCC...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCACAGATTGCGAATACCTaGGGCTTCCTAGGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSQIANT*GFLGSS
Trigger: ACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTG...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAGTCACCTTTTCATGTTaGGTTGTTTATTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: KYRVLRSGDVGARPACHGVTFSC*VVYWPL
Trigger: AAGAGGCCAATAAACAACCCAACATGAAAAGGTGAC...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCTATCTGGTGAAAACCTaGAGAACAAGAGCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: VDWHPNTESYAAGTWVRAYLVKT*RTRAES
Trigger: AGACTCCGCTCTTGTTCTCCAGGTTTTCACCAGATA...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGCCTCATGCTCTCCTCTaGTCACCTCTATTTACGCTC +
Preference number: 4 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGPHALL*SPLFTL
Trigger: GAGCGTAAATAGAGGTGACCAGAGGAGAGCATGAGG...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCCCGGGTAGTGGCCGATaGCCTCGCTGTAGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSPGSGR*PRCRWA
Trigger: CGCCCACCTACAGCGAGGTCATCGGCCACTACCCGG...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCAGCCGTCAGGCGACTCTaGAATTCCGACATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QRRAVPTPGTNVKALESAAVRRL*NSDISP
Trigger: GGGAGAAATGTCGGAATTTCAGAGTCGCCTGACGGC...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAACCTGCCTTCACCGGTaGACCTTTAGCCAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTTCLHR*TFSQLN
Trigger: GTTCAGCTGGCTAAAGGTTCACCGGTGAAGGCAGGT...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATCGGGATAACCTGTACTaGTTTCTCTGCAGGACCTTT +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHRDNLY*FLCRTF
Trigger: AAAGGTCCTGCAGAGAAATCAGTACAGGTTATCCCG...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACATGGCTCAAGAGGATATaGGGACTGTCTCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTWLKRI*GLSQPG
Trigger: GCCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCA...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACATCCAGACCATACCATaGAGCAACGAGACCCAAACA +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHIQTIP*SNETQT
Trigger: TGTTTGGGTCTCGTTGCTTCATGGTATGGTCTGGAT...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATATCCAGACCATACCATaGAGCAACGAGACCCAAACA +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHIQTIP*SNETQT
Trigger: TGTTTGGGTCTCGTTGCTTCATGGTATGGTCTGGAT...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAGCTCTCCCCCAGCCCTaGTTTTTGCTACATATGGGG +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTALPQP*FLLHMG
Trigger: CCCCATATGTAGCAAAAATCAGGGCTGGGGGAGAGC...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCCGGCGGCGGTGCTGTTaGCCCCCATCAAGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSRRRCC*PPSSGA
Trigger: TGCACCGCTTGATGGGGGTCAACAGCACCGCCGCCG...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341744.8
CDS-3UTR GCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGACGGTTCAGTTCCAGCTaGTGCTCGGGGTCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGRFSSS*CSGSRS
Trigger: GCTTCGGGACCCCGAGCAGCAGCTGGAACTGAACCG...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCGGCGGCCCACTGCTCTaGTGGTGCTGGAAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLGGPLL*WCWKED
Trigger: GTCCTCCTTCCAGCACCAGCAGAGCAGTGGGCCGCC...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGAGGAGGGCGGCCCACTaGTCTGCTGGTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKRRAAH*SAGAGR
Trigger: CCTTCCAGCACCAGCAGAGCAGTGGGCCGCCCTCCT...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGAAGCGCGGAGTGTTCTaGCTTTTCACCTACGCAGCC +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEKRGVF*LFTYAA
Trigger: GGCTGCGTAGGTGAAAAGGCAGAACACTCCGCGCTT...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGACGGGGGCTCACCCTCTaGCGTCAGGCGACTCTGAAA +
Preference number: 4 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGRGLTL*RQATLK
Trigger: TTTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCG...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACCCACGTCTGTCAGCTaGCACCTTCGTAAAGCACAC +
Preference number: 4 (lower is better)
Translates to: QRRAVPTPGTNVKALESAPTSVS*HLRKAH
Trigger: GTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGG...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGTTTGGGCTGACACCATaGACACACACAAGGTCCACT +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQFGLTP*THTRST
Trigger: AGTGGACCTTGTGTGTGTGCATGGTGTCAGCCCAAA...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGAAGAGCGTTTGCAGTTaGACGTGCAGGAGACATTGG +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQKSVCS*TCRRHW
Trigger: CCAATGTCTCCTGCACGTGCAACTGCAAACGCTCTT...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341744.8
CDS-3UTR GCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAACTCCAGCTCCGCCATTaGCTGGTTTCGCAGGAGACT +
Preference number: 4 (lower is better)
Translates to: RECHCFFSKALETRHIKELQLRH*LVSQET
Trigger: AGTCTCCTGCGAAACCAGGCAATGGCGGAGCTGGAG...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347215.8
CDS-3UTR CCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTCGTCTGACAGCGAGATaGTGGGTGGCAGGTCGATCT +
Preference number: 4 (lower is better)
Translates to: ETKLVPFQSATSENPHLTRLTAR*WVAGRS
Trigger: AGATCGACCTGCCACCCACCATCTCGCTGTCAGACG...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCAGGTCACTGTCGAAGATaGTTCTGTTTGGGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: QRRAVPTPGTNVKALESAGHCRR*FCLGVR
Trigger: GCGCACCCCCAAACAGAACCATCTTCGACAGTGACC...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCGTCACCTTTTCATGTTaGGTTGTTTATTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIVTFSC*VVYWPL
Trigger: AAGAGGCCAATAAACAACCCAACATGAAAAGGTGAC...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCAAACTTTCTACTAGGCTaGCGGCATGCAGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: QRRAVPTPGTNVKALESANFLLG*RHAEPT
Trigger: CGTGGGCTCTGCATGCCGCCAGCCTAGTAGAAAGTT...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGAACTTTCTACTAGGCTaGCGGCATGCAGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWNFLLG*RHAEPT
Trigger: CGTGGGCTCTGCATGCCGCCAGCCTAGTAGAAAGTT...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAAGGACTGTCTCAGCCTaGCTTTGGGCTGACACCATG +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTRTVSA*LWADTM
Trigger: CATGGTGTCAGCCCAAAGCCAGGCTGAGACAGTCCT...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGAGGACTGTCTCAGCCTaGCTTTGGGCTGACACCATG +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTERTVSA*LWADTM
Trigger: CATGGTGTCAGCCCAAAGCCAGGCTGAGACAGTCCT...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACCATCTAACTTCCTACTaGAAAAGAGGGCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHHLTSY*KRGPPQ
Trigger: CTGAGGAGGCCCTCTTTTCCAGTAGGAAGTTAGATG...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAACCACAGGCATCCTTCTaGGGACAGGGCATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RECHCFFSKALETRHIKEPQASF*GQGIFS
Trigger: AGAGAAGATGCCCTGTCCTCAGAAGGATGCCTGTGG...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGAAGGGGAAGAGAAGGTaGAGAATTCTGCGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEKGKRR*RILRPK
Trigger: CTTCGGGCGCAGAATTCTTCACCTTCTCTTCCCCTT...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGAAGGGGAAGAGAAGGTaGAGAATTCTGCGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWKGKRR*RILRPK
Trigger: CTTCGGGCGCAGAATTCTTCACCTTCTCTTCCCCTT...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACCCCAAATCTATCTGGTaGAAACCTGGAGAACAAGAG +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHPKSIW*KPGEQE
Trigger: CTCTTGTTCTCCAGGTTTTCACCAGATAGATTTGGG...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGAAACAAATTTTAGGCTaGCGACTTCACGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGKQILG*RLHGEA
Trigger: TGCCTCTCCGTGAAGTCGTCAGCCTAAAATTTGTTT...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAATGGCTCAAGAGGATATaGGGACTGTCTCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RECHCFFSKALETRHIKEWLKRI*GLSQPG
Trigger: GCCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCA...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGAACGCTCGGCCTTCTCTaGACCAGGATGGAACGGCAG +
Preference number: 4 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGTLGLL*TRMERQ
Trigger: CTGCCGTTCCATCCTGGTTCAGAGAAGGCCGAGCGT...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCAAAACACTGGGCTTTCTaGGAACACGGACGGTTCTTA +
Preference number: 4 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSKHWAF*EHGRFL
Trigger: TAAGAACCGTCCGTGTTCTCAGAAAGCCCAGTGTTT...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGAAACACTGGGCTTTCTaGGAACACGGACGGTTCTTA +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQKHWAF*EHGRFL
Trigger: TAAGAACCGTCCGTGTTCTCAGAAAGCCCAGTGTTT...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAAGCTCTCCCCCAGCCCTaGTTTTTGCTACATATGGGG +
Preference number: 4 (lower is better)
Translates to: RECHCFFSKALETRHIKEALPQP*FLLHMG
Trigger: CCCCATATGTAGCAAAAATCAGGGCTGGGGGAGAGC...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTGCTCTCCCCCAGCCCTaGTTTTTGCTACATATGGGG +
Preference number: 4 (lower is better)
Translates to: ETKLVPFQSATSENPHLTALPQP*FLLHMG
Trigger: CCCCATATGTAGCAAAAATCAGGGCTGGGGGAGAGC...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGAAATGAGGACAGGGAATaGACCCGGCTCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGNEDRE*TRLSPS
Trigger: GCTGGGGGAGAGCCGGGTTCATTCCCTGTCCTCATT...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGCGCCAGGAACCAACGTaGAAGCATTGGAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWRQEPT*KHWNQH
Trigger: GTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCG...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCTACATAAGTTTAACTTaGACAGAGCTTGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIYISLT*TELGKW
Trigger: CCATTTCCCAAGCTCTGTTCAAGTTAAACTTATGTA...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGGGAGGAGTCCAAGCGTaGCCAGCCCAGAGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKGGVQA*PAQREV
Trigger: AACCTCCCTCTGGGCTGGGCACGCTTGGACTCCTCC...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265626.8
CDS-3UTR GCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCGGCGGCCCACTGCTCTaGTGGTGCTGGAAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSGGPLL*WCWKED
Trigger: GTCCTCCTTCCAGCACCAGCAGAGCAGTGGGCCGCC...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCCGGGGGCTCACCCTCTaGCGTCAGGCGACTCTGAAA +
Preference number: 4 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLRGLTL*RQATLK
Trigger: TTTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCG...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAAGGAGGAGGTCAGATTaGGAATACCTGGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTRRRSD*EYLGLP
Trigger: AGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGAACTAGGCTGGCGGCATaGAGAGCCCACGTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGTRLAA*RAHVCQ
Trigger: CTGACAGACGTGGGCTCTGCATGCCGCCAGCCTAGT...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCATTTCCAGAGACAACCTaGTGGCTGTCTTGGGATGCG +
Preference number: 4 (lower is better)
Translates to: QRRAVPTPGTNVKALESAFPETT*WLSWDA
Trigger: CGCATCCCAAGACAGCCAGCAGGTTGTCTCTGGAAA...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGTTTCCAGAGACAACCTaGTGGCTGTCTTGGGATGCG +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWFPETT*WLSWDA
Trigger: CGCATCCCAAGACAGCCAGCAGGTTGTCTCTGGAAA...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGCCCAGCCCTGATTTTTaGTACATATGGGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQPSPDF*YIWGPF
Trigger: AAAGGGACCCCATATGTAGCAAAAATCAGGGCTGGG...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCAGCCGGTGCAGGAAGTaGGTTCCCGCTCTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLSRCRK*VPALPA
Trigger: TGCAGGGAGAGCGGGAACCCACTTCCTGCACCGGCT...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265626.8
CDS-3UTR CCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCAAAGCCCGCCGCTCCTaGCCAAGGCCTCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLKARRS*PRPLCR
Trigger: TCTGCAGAGAGGCCTTGGCCAGGAGCGGCGGGCTTT...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGAAAGCCCGCCGCTCCTaGCCAAGGCCTCTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKKARRS*PRPLCR
Trigger: TCTGCAGAGAGGCCTTGGCCAGGAGCGGCGGGCTTT...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATTATCTGGTGAAAACCTaGAGAACAAGAGCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHYLVKT*RTRAES
Trigger: AGACTCCGCTCTTGTTCTCCAGGTTTTCACCAGATA...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGGCCCTTGGTGGACCCTaGGAGGGGATACCAGTCCCA +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKALGGP*EGIPVP
Trigger: TGGGACTGGTATCCCCTCCCAGGGTCCACCAAGGGC...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTGTCTCAGCCTGGCTTTaGGCTGACACCATGCACACA +
Preference number: 4 (lower is better)
Translates to: ETKLVPFQSATSENPHLTVSAWL*ADTMHT
Trigger: TGTGTGCATGGTGTCAGCCCAAAGCCAGGCTGAGAC...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGCATCTAACTTCCTACTaGAAAAGAGGGCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQHLTSY*KRGPPQ
Trigger: CTGAGGAGGCCCTCTTTTCCAGTAGGAAGTTAGATG...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAGATTTTTGCTACATATaGGGTCCCTTTTCATTCTTT +
Preference number: 4 (lower is better)
Translates to: KYRVLRSGDVGARPACHGDFCYI*GPFSFF
Trigger: AAAGAATGAAAAGGGACCCCATATGTAGCAAAAATC...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATTTCAGGCCTGTGGATTaGCATCCAAATACAGAGTCT +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHFRPVD*HPNTES
Trigger: AGACTCTGTATTTGGATGCCAATCCACAGGCCTGAA...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGTGGGATTCCGTTGCCTaGCACTGTGCTCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKWDSVA*HCALRG
Trigger: CCCTCGGAGAGCACAGTGTCAGGCAACGGAATCCCA...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCAGTGAGAATTGATCCGTaGAGGGAAACAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: QRRAVPTPGTNVKALESAVRIDP*RETDRR
Trigger: CCTCCTGTCTGTTTCCCTTCACGGATCAATTCTCAC...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGCACGTTTCACATGCATaGGCTCGAGTGGCTAGAACT +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEHVSHA*ARVART
Trigger: AGTTCTAGCCACTCGAGCTCATGCATGTGAAACGTG...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGGATACCAGTCCCAGGTaGGTGAGGCACTGTCCGGGA +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKDTSPR*VRHCPG
Trigger: TCCCGGACAGTGCCTCACTCACCTGGGACTGGTATC...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGACTGGGCTTCAACACTaGGTTGTCATGAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWTGLQH*VVMRGT
Trigger: TGTCCCTCTCATGACAACTCAGTGTTGAAGCCCAGT...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGAGAGGCCACTACCCCATaGACTTCTGCCATCCACTGG +
Preference number: 4 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGEATTP*TSAIHW
Trigger: CCAGTGGATGGCAGAAGTTCATGGGGTAGTGGCCTC...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCCCTGGTAGCCTTTTCAAAGATAACGTaGCAACTACCATCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: QSALQRQVIEPSGMSLVAFSKIT*QLPSRG
Trigger: TCCTCTAGATGGTAGTTGTCACGTTATCTTTGAAAA...GGCTACCAGGGACATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGCCAATCAGCCACTTCTaGGAACCCCCATCTAACTTC +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEPISHF*EPPSNF
Trigger: GAAGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGG...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGAGGAACGGCAGACCCCTaGAACGAAGCTTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGGTADP*NEACPL
Trigger: AAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCC...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCACGCTCGGCCTTCTCTaGACCAGGATGGAACGGCAG +
Preference number: 4 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLTLGLL*TRMERQ
Trigger: CTGCCGTTCCATCCTGGTTCAGAGAAGGCCGAGCGT...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCAATGAGGACAGGGAATaGACCCGGCTCTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLNEDRE*TRLSPS
Trigger: GCTGGGGGAGAGCCGGGTTCATTCCCTGTCCTCATT...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGGGGATCATGGCCCACTaGACCCCCAAGCGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKGIMAH*TPKRFH
Trigger: GTGAAAGCGCTTGGGGGTTCAGTGGGCCATGATCCC...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTATACAAAAATACTCCTaGCCTCGCACATACAGTTTC +
Preference number: 4 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSIQKYS*PRTYSF
Trigger: GAAACTGTATGTGCGAGGGCAGGAGTATTTTTGTAT...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCAGCTCGGGTTGGTGTTTaGTCAACTGCTTTACTCATT +
Preference number: 4 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSARVGV*STALLI
Trigger: AATGAGTAAAGCAGTTGAGCAAACACCAACCCGAGC...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACAATCATCTTTACAAGTaGGTCCTTGTACCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHNHLYK*VLVPFG
Trigger: CCCGAAAGGTACAAGGACGCACTTGTAAAGATGATT...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCTCTCTCCTCCGCCCCTaGCTGTGCCGGCTGATGAAG +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSSLLRP*LCRLMK
Trigger: CTTCATCAGCCGGCACAGCCAGGGGCGGAGGAGAGA...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGGCAGGTACGGATAGGTaGGCTGGAAGCGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKAGTDR*AGSGGS
Trigger: GCTTCCACCGCTTCCAGCCCACCTATCCGTACCTGC...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGACTGACAGCGAGATGGTaGGTGGCAGGTCGATCTCGT +
Preference number: 4 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGLTARW*VAGRSR
Trigger: ACGAGATCGACCTGCCACCCACCATCTCGCTGTCAG...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGAACTCGGTGCCTCCGTaGTTAACTTTCCTATTTTGC +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQNSVPP*LTFLFC
Trigger: GCAAAATAGGAAAGTTAACCACGGAGGCACCGAGTT...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGAGTCATCGAGCCCTCTaGCATGTCCCTGGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKSHRAL*HVPGSP
Trigger: CGGGCTACCAGGGACATGCCAGAGGGCTCGATGACT...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTCCCTTTCACCTATCCTaGGAGAAACCCAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: ETKLVPFQSATSENPHLTPFHLS*EKPRLV
Trigger: GACAAGCCTGGGTTTCTCCCAGGATAGGTGAAAGGG...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAACCCTTTCACCTATCCTaGGAGAAACCCAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: RECHCFFSKALETRHIKEPFHLS*EKPRLV
Trigger: GACAAGCCTGGGTTTCTCCCAGGATAGGTGAAAGGG...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAAGCCCGAAGCTCGGGTTaGTGTTTGCTCAACTGCTTT +
Preference number: 4 (lower is better)
Translates to: RECHCFFSKALETRHIKEARSSG*CLLNCF
Trigger: AAAGCAGTTGAGCAAACACCAACCCGAGCTTCGGGC...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGTTCAGGCCTGTGGATTaGCATCCAAATACAGAGTCT +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQFRPVD*HPNTES
Trigger: AGACTCTGTATTTGGATGCCAATCCACAGGCCTGAA...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGGTTTCTTCAGGCCTGTaGATTGGCATCCAAATACAG +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQVSSGL*IGIQIQ
Trigger: CTGTATTTGGATGCCAATCCACAGGCCTGAAGAAAC...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CAA 72 bp CCAGACCATACCATGAAGCAACGAGACCCAAACAGTTaGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PDHTMKQRDPNS*AQEDMRTVSAW
Trigger: CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTGCTTCATGGTATGGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCGGCTCAGCAGGCACGTaGTCACCACCACCATCACCA +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSGSAGT*SPPPSP
Trigger: TGGTGATGGTGGTGGTGATCACGTGCCTGCTGAGCC...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCTGGGATTCCGTTGCCTaGCACTGTGCTCTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSWDSVA*HCALRG
Trigger: CCCTCGGAGAGCACAGTGTCAGGCAACGGAATCCCA...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCACTCTTAAGTGAGAATTaGTCCGTGAAGGGAAACAGA +
Preference number: 4 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSLLSEN*SVKGNR
Trigger: TCTGTTTCCCTTCACGGATCAATTCTCACTTAAGAG...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGAAACACTGGGCTTTCTaGGAACACGGACGGTTCTTA +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEKHWAF*EHGRFL
Trigger: TAAGAACCGTCCGTGTTCTCAGAAAGCCCAGTGTTT...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGGCCACTAATGATTACTaGTACACAACAAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGATNDY*YTTSSF
Trigger: GAAACTGCTTGTTGTGTATCAGTAATCATTAGTGGC...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGCCACTAATGATTACTaGTACACAACAAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHATNDY*YTTSSF
Trigger: GAAACTGCTTGTTGTGTATCAGTAATCATTAGTGGC...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAGTTTATCCTTCTCTTTaGTCCAGATGGCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTVYPSL*SRWLRS
Trigger: AGAGCGCAGCCATCTGGAGCAAAGAGAAGGATAAAC...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCCAGAAGCATCCACTCTaGAGGGACAGTGGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSQKHPL*RDSGPS
Trigger: CGAGGGGCCACTGTCCCTGCAGAGTGGATGCTTCTG...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCAAATCATCTTTACAAGTaGGTCCTTGTACCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSNHLYK*VLVPFG
Trigger: CCCGAAAGGTACAAGGACGCACTTGTAAAGATGATT...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTCGACGGGAGTGTCACTaGTTCTTCAGTAAGGCACTA +
Preference number: 4 (lower is better)
Translates to: ETKLVPFQSATSENPHLTRRECH*FFSKAL
Trigger: TAGTGCCTTACTGAAGAAGCAGTGACACTCCCGTCG...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTTTTGGGCTGACACCATaGACACACACAAGGTCCACT +
Preference number: 4 (lower is better)
Translates to: ETKLVPFQSATSENPHLTFGLTP*THTRST
Trigger: AGTGGACCTTGTGTGTGTGCATGGTGTCAGCCCAAA...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAATTTGGGCTGACACCATaGACACACACAAGGTCCACT +
Preference number: 4 (lower is better)
Translates to: RECHCFFSKALETRHIKEFGLTP*THTRST
Trigger: AGTGGACCTTGTGTGTGTGCATGGTGTCAGCCCAAA...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGTCAAGCCCAGGGATGTaGCTCAGGCTGGTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKSSPGM*LRLVQA
Trigger: AGCTTGGACCAGCCTGAGCCACATCCCTGGGCTTGA...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265626.8
CDS-3UTR CCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGCGTCTGACAGCGAGATaGTGGGTGGCAGGTCGATCT +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKRLTAR*WVAGRS
Trigger: AGATCGACCTGCCACCCACCATCTCGCTGTCAGACG...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGGGCAAAACCACTACCTaGAACTCGGTGCCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKGKTTT*NSVPPW
Trigger: CCACGGAGGCACCGAGTTCCAGGTAGTGGTTTTGCC...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGGTCACCTTTTCATGTTaGGTTGTTTATTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGVTFSC*VVYWPL
Trigger: AAGAGGCCAATAAACAACCCAACATGAAAAGGTGAC...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCACCTTTTCATGTTaGGTTGTTTATTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: AEQPPKRPAETSHRALWHVTFSC*VVYWPL
Trigger: AAGAGGCCAATAAACAACCCAACATGAAAAGGTGAC...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTCCTCATGCTCTCCTCTaGTCACCTCTATTTACGCTC +
Preference number: 4 (lower is better)
Translates to: ETKLVPFQSATSENPHLTPHALL*SPLFTL
Trigger: GAGCGTAAATAGAGGTGACCAGAGGAGAGCATGAGG...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CAA 72 bp CTGATACACAACAAGCAGTTTCTTCAGGCCTGTGGATaGGCATCCAAATACAGAGTCTTACGCAGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: LIHNKQFLQACG*ASKYRVLRSGD
Trigger: GTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGAAGAAACTGCTTGTTGTGTATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTACGATGATGATGATCTaGACAAACTCCAGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: ETKLVPFQSATSENPHLTTMMMI*TNSSSA
Trigger: AGCGGAGCTGGAGTTTGTTCAGATCATCATCATCGT...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265626.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGGCCGTCAGGCGACTCTaGAATTCCGACATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKAVRRL*NSDISP
Trigger: GGGAGAAATGTCGGAATTTCAGAGTCGCCTGACGGC...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACATATTGGCCTCTTAAGTaGGAATTGATCCGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTYWPLK*ELIREG
Trigger: CCCTTCACGGATCAATTCTCACTTAAGAGGCCAATA...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGTATTGGCCTCTTAAGTaGGAATTGATCCGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEYWPLK*ELIREG
Trigger: CCCTTCACGGATCAATTCTCACTTAAGAGGCCAATA...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGAAACAAATTTTAGGCTaGCGACTTCACGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWKQILG*RLHGEA
Trigger: TGCCTCTCCGTGAAGTCGTCAGCCTAAAATTTGTTT...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCGAGGCCACTACCCCATaGACTTCTGCCATCCACTGG +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSEATTP*TSAIHW
Trigger: CCAGTGGATGGCAGAAGTTCATGGGGTAGTGGCCTC...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGACGCCAGGAACCAACGTaGAAGCATTGGAATCAGCAC +
Preference number: 4 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGRQEPT*KHWNQH
Trigger: GTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCG...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCGCTCTGGGATTCCGTTaGCTGACACTGTGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSALGFR*LTLCSP
Trigger: CGGAGAGCACAGTGTCAGGCAACGGAATCCCAGAGC...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCAAGCGCGGAGTGTTCTaGCTTTTCACCTACGCAGCC +
Preference number: 4 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLKRGVF*LFTYAA
Trigger: GGCTGCGTAGGTGAAAAGGCAGAACACTCCGCGCTT...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCACCACCAAAGCGCCCTaGAGAGACAAGTCATCGAGC +
Preference number: 4 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLTTKAP*RDKSSS
Trigger: GCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGT...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGACCACCAAAGCGCCCTaGAGAGACAAGTCATCGAGC +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKTTKAP*RDKSSS
Trigger: GCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGT...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGGAAGGTGAAGAATTCTaGGCCCGAAGCTCGGGTTGG +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKEGEEF*ARSSGW
Trigger: CCAACCCGAGCTTCGGGCGCAGAATTCTTCACCTTC...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCCCCACGTCTGTCAGCTaGCACCTTCGTAAAGCACAC +
Preference number: 4 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLPTSVS*HLRKAH
Trigger: GTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGG...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAATACCCCATGAACTTCTaGCATCCACTGGACATGAAG +
Preference number: 4 (lower is better)
Translates to: RECHCFFSKALETRHIKEYPMNF*HPLDMK
Trigger: CTTCATGTCCAGTGGATGGCAGAAGTTCATGGGGTA...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGTGTAGAACCGGGCTTTaGAGGGGAGATAATTTTCCT +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTECRTGL*RGDNFP
Trigger: AGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACA...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTCCCAGCCCTGATTTTTaGTACATATGGGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: ETKLVPFQSATSENPHLTPSPDF*YIWGPF
Trigger: AAAGGGACCCCATATGTAGCAAAAATCAGGGCTGGG...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCCTGACAGCGAGATGGTaGGTGGCAGGTCGATCTCGT +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSLTARW*VAGRSR
Trigger: ACGAGATCGACCTGCCACCCACCATCTCGCTGTCAG...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGAACTCGGTGCCTCCGTaGTTAACTTTCCTATTTTGC +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWNSVPP*LTFLFC
Trigger: GCAAAATAGGAAAGTTAACCACGGAGGCACCGAGTT...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCGGCAAAACCACTACCTaGAACTCGGTGCCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSGKTTT*NSVPPW
Trigger: CCACGGAGGCACCGAGTTCCAGGTAGTGGTTTTGCC...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGTATCTGGTGAAAACCTaGAGAACAAGAGCGGAGTCT +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWYLVKT*RTRAES
Trigger: AGACTCCGCTCTTGTTCTCCAGGTTTTCACCAGATA...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGGGTTTTCAGCCTAGATaGGAGTCGTGTACAAACCTT +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEGFQPR*ESCTNL
Trigger: AAGGTTTGTACACGACTCCCATCTAGGCTGAAAACC...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAGGTTTTCAGCCTAGATaGGAGTCGTGTACAAACCTT +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTGFQPR*ESCTNL
Trigger: AAGGTTTGTACACGACTCCCATCTAGGCTGAAAACC...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGGATATTTTATGGTTCTaGAAGCTTCGTGTTGCACAT +
Preference number: 4 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGDILWF*KLRVAH
Trigger: ATGTGCAACACGAAGCTTCCAGAACCATAAAATATC...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAGTTTCTTCAGGCCTGTaGATTGGCATCCAAATACAG +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTVSSGL*IGIQIQ
Trigger: CTGTATTTGGATGCCAATCCACAGGCCTGAAGAAAC...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CAA 72 bp GGTGAAGAATTCTGCGCCCGAAGCTCGGGTTGGTGTTaGCTCAACTGCTTTACTCATTTTAACCCTTTCACC +
Preference number: 4 (lower is better)
Translates to: GEEFCARSSGWC*LNCFTHFNPFT
Trigger: GGTGAAAGGGTTAAAATGAGTAAAGCAGTTGAGCAAACACCAACCCGAGCTTCGGGCGCAGAATTCTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACTCTTAAGTGAGAATTaGTCCGTGAAGGGAAACAGA +
Preference number: 4 (lower is better)
Translates to: QRRAVPTPGTNVKALESALLSEN*SVKGNR
Trigger: TCTGTTTCCCTTCACGGATCAATTCTCACTTAAGAG...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCATTTTCAAAGATAACGTaGCAACTACCATCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSFSKIT*QLPSRG
Trigger: TCCTCTAGATGGTAGTTGTCACGTTATCTTTGAAAA...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGTTTTCAAAGATAACGTaGCAACTACCATCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQFSKIT*QLPSRG
Trigger: TCCTCTAGATGGTAGTTGTCACGTTATCTTTGAAAA...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGACCAATCAGCCACTTCTaGGAACCCCCATCTAACTTC +
Preference number: 4 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGPISHF*EPPSNF
Trigger: GAAGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGG...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGTACATAAGTTTAACTTaGACAGAGCTTGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQYISLT*TELGKW
Trigger: CCATTTCCCAAGCTCTGTTCAAGTTAAACTTATGTA...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGCAAACTCCAGCTCCGTaGTCTCCATGCTCTGGAACA +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKQTPAP*SPCSGT
Trigger: TGTTCCAGAGCATGGAGATCACGGAGCTGGAGTTTG...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341744.8
CDS-3UTR GCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCGCTGATGAAGGACCGTaGAGACAGCTTGTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLADEGP*RQLVVA
Trigger: AGCCACTACAAGCTGTCTGCACGGTCCTTCATCAGC...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCACCACCAAAGCGCCCTaGAGAGACAAGTCATCGAGC +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSTTKAP*RDKSSS
Trigger: GCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGT...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCGTTTGCAGTTGCACGTaGAGGAGACATTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSVCSCT*RRHWAA
Trigger: GGCAGCCCAATGTCTCCTGCACGTGCAACTGCAAAC...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341744.8
CDS-3UTR CCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCCCCTTTCACCTATCCTaGGAGAAACCCAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLPFHLS*EKPRLV
Trigger: GACAAGCCTGGGTTTCTCCCAGGATAGGTGAAAGGG...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGGCCCGAAGCTCGGGTTaGTGTTTGCTCAACTGCTTT +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKARSSG*CLLNCF
Trigger: AAAGCAGTTGAGCAAACACCAACCCGAGCTTCGGGC...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGATGCATGAGCTCGAGTaGCTAGAACTTCAAAACTGT +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWMHELE*LELQNC
Trigger: ACAGTTTTGAAGTTCTAGCCACTCGAGCTCATGCAT...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCAACTTTCTACTAGGCTaGCGGCATGCAGAGCCCACG +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSNFLLG*RHAEPT
Trigger: CGTGGGCTCTGCATGCCGCCAGCCTAGTAGAAAGTT...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGGATTTTTGCTACATATaGGGTCCCTTTTCATTCTTT +
Preference number: 4 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGDFCYI*GPFSFF
Trigger: AAAGAATGAAAAGGGACCCCATATGTAGCAAAAATC...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGCGACGGGATATTTTATaGTTCTGGAAGCTTCGTGTT +
Preference number: 4 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTERRDIL*FWKLRV
Trigger: AACACGAAGCTTCCAGAACCATAAAATATCCCGTCG...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAATTCAGGCCTGTGGATTaGCATCCAAATACAGAGTCT +
Preference number: 4 (lower is better)
Translates to: RECHCFFSKALETRHIKEFRPVD*HPNTES
Trigger: AGACTCTGTATTTGGATGCCAATCCACAGGCCTGAA...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAAGTTTCTTCAGGCCTGTaGATTGGCATCCAAATACAG +
Preference number: 4 (lower is better)
Translates to: RECHCFFSKALETRHIKEVSSGL*IGIQIQ
Trigger: CTGTATTTGGATGCCAATCCACAGGCCTGAAGAAAC...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGTTCCTATTTTGCTTGTaGTTTAAAGGCTGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWFLFCL*FKGCSG
Trigger: CCCAGAACAGCCTTTAAATCACAAGCAAAATAGGAA...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCAAGGGGAAGAGAAGGTaGAGAATTCTGCGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSKGKRR*RILRPK
Trigger: CTTCGGGCGCAGAATTCTTCACCTTCTCTTCCCCTT...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCACTGGGCTTCAACACTaGGTTGTCATGAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLTGLQH*VVMRGT
Trigger: TGTCCCTCTCATGACAACTCAGTGTTGAAGCCCAGT...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGGCCACTAATGATTACTaGTACACAACAAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWATNDY*YTTSSF
Trigger: GAAACTGCTTGTTGTGTATCAGTAATCATTAGTGGC...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCAGCCACTAATGATTACTaGTACACAACAAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: QRRAVPTPGTNVKALESAATNDY*YTTSSF
Trigger: GAAACTGCTTGTTGTGTATCAGTAATCATTAGTGGC...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCAATACAAAAATACTCCTaGCCTCGCACATACAGTTTC +
Preference number: 4 (lower is better)
Translates to: QRRAVPTPGTNVKALESAIQKYS*PRTYSF
Trigger: GAAACTGTATGTGCGAGGGCAGGAGTATTTTTGTAT...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAATACAAAAATACTCCTaGCCTCGCACATACAGTTTC +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTIQKYS*PRTYSF
Trigger: GAAACTGTATGTGCGAGGGCAGGAGTATTTTTGTAT...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCCGACGGGAGTGTCACTaGTTCTTCAGTAAGGCACTA +
Preference number: 4 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLRRECH*FFSKAL
Trigger: TAGTGCCTTACTGAAGAAGCAGTGACACTCCCGTCG...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCGCCCGAAGCTCGGGTTaGTGTTTGCTCAACTGCTTT +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSARSSG*CLLNCF
Trigger: AAAGCAGTTGAGCAAACACCAACCCGAGCTTCGGGC...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTCGACGGGATATTTTATaGTTCTGGAAGCTTCGTGTT +
Preference number: 4 (lower is better)
Translates to: ETKLVPFQSATSENPHLTRRDIL*FWKLRV
Trigger: AACACGAAGCTTCCAGAACCATAAAATATCCCGTCG...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTTTCCTATTTTGCTTGTaGTTTAAAGGCTGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ETKLVPFQSATSENPHLTFLFCL*FKGCSG
Trigger: CCCAGAACAGCCTTTAAATCACAAGCAAAATAGGAA...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCGTGAGAATTGATCCGTaGAGGGAAACAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSVRIDP*RETDRR
Trigger: CCTCCTGTCTGTTTCCCTTCACGGATCAATTCTCAC...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGACCCAAATCTATCTGGTaGAAACCTGGAGAACAAGAG +
Preference number: 4 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGPKSIW*KPGEQE
Trigger: CTCTTGTTCTCCAGGTTTTCACCAGATAGATTTGGG...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACATACATAAGTTTAACTTaGACAGAGCTTGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTYISLT*TELGKW
Trigger: CCATTTCCCAAGCTCTGTTCAAGTTAAACTTATGTA...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCACGATGATGATGATCTaGACAAACTCCAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLTMMMI*TNSSSV
Trigger: CACGGAGCTGGAGTTTGTTCAGATCATCATCATCGT...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341744.8
CDS-3UTR GCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCTACCCCATGAACTTCTaGCATCCACTGGACATGAAG +
Preference number: 4 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLYPMNF*HPLDMK
Trigger: CTTCATGTCCAGTGGATGGCAGAAGTTCATGGGGTA...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGATGTAGAACCGGGCTTTaGAGGGGAGATAATTTTCCT +
Preference number: 4 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGCRTGL*RGDNFP
Trigger: AGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACA...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGCCCAGCCCTGATTTTTaGTACATATGGGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKPSPDF*YIWGPF
Trigger: AAAGGGACCCCATATGTAGCAAAAATCAGGGCTGGG...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGCATCTAACTTCCTACTaGAAAAGAGGGCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKHLTSY*KRGPPQ
Trigger: CTGAGGAGGCCCTCTTTTCCAGTAGGAAGTTAGATG...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAGATATTTTATGGTTCTaGAAGCTTCGTGTTGCACAT +
Preference number: 4 (lower is better)
Translates to: ESSSHARNQRESIGISTTDILWF*KLRVAH
Trigger: ATGTGCAACACGAAGCTTCCAGAACCATAAAATATC...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCAGATATTTTATGGTTCTaGAAGCTTCGTGTTGCACAT +
Preference number: 4 (lower is better)
Translates to: QRRAVPTPGTNVKALESADILWF*KLRVAH
Trigger: ATGTGCAACACGAAGCTTCCAGAACCATAAAATATC...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
3UTR CAA 72 bp TTTAACCCTTTCACCTATCCTGGGAGAAACCCAGGCTaGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTC +
Preference number: 4 (lower is better)
Translates to: FNPFTYPGRNPG*SPFHVGLFIGL
Trigger: GAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTCCCAGGATAGGTGAAAGGGTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGTATTGGCCTCTTAAGTaGGAATTGATCCGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKYWPLK*ELIREG
Trigger: CCCTTCACGGATCAATTCTCACTTAAGAGGCCAATA...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCCCCAAATCTATCTGGTaGAAACCTGGAGAACAAGAG +
Preference number: 4 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLPKSIW*KPGEQE
Trigger: CTCTTGTTCTCCAGGTTTTCACCAGATAGATTTGGG...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCCGGGATAACCTGTACTaGTTTCTCTGCAGGACCTTT +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSRDNLY*FLCRTF
Trigger: AAAGGTCCTGCAGAGAAATCAGTACAGGTTATCCCG...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAATACATAAGTTTAACTTaGACAGAGCTTGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: RECHCFFSKALETRHIKEYISLT*TELGKW
Trigger: CCATTTCCCAAGCTCTGTTCAAGTTAAACTTATGTA...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCTACCCCATGAACTTCTaGCATCCACTGGACATGAAG +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSYPMNF*HPLDMK
Trigger: CTTCATGTCCAGTGGATGGCAGAAGTTCATGGGGTA...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCAACTCGGTGCCTCCGTaGTTAACTTTCCTATTTTGC +
Preference number: 4 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLNSVPP*LTFLFC
Trigger: GCAAAATAGGAAAGTTAACCACGGAGGCACCGAGTT...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAAGATATTTTATGGTTCTaGAAGCTTCGTGTTGCACAT +
Preference number: 4 (lower is better)
Translates to: RECHCFFSKALETRHIKEDILWF*KLRVAH
Trigger: ATGTGCAACACGAAGCTTCCAGAACCATAAAATATC...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGGTTTCTTCAGGCCTGTaGATTGGCATCCAAATACAG +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKVSSGL*IGIQIQ
Trigger: CTGTATTTGGATGCCAATCCACAGGCCTGAAGAAAC...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR GCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGAATCATCTTTACAAGTaGGTCCTTGTACCTTTCGGG +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKNHLYK*VLVPFG
Trigger: CCCGAAAGGTACAAGGACGCACTTGTAAAGATGATT...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGATGCATGAGCTCGAGTaGCTAGAACTTCAAAACTGT +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKMHELE*LELQNC
Trigger: ACAGTTTTGAAGTTCTAGCCACTCGAGCTCATGCAT...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTGATTTTTGCTACATATaGGGTCCCTTTTCATTCTTT +
Preference number: 4 (lower is better)
Translates to: ETKLVPFQSATSENPHLTDFCYI*GPFSFF
Trigger: AAAGAATGAAAAGGGACCCCATATGTAGCAAAAATC...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGCGACGGGATATTTTATaGTTCTGGAAGCTTCGTGTT +
Preference number: 4 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKRRDIL*FWKLRV
Trigger: AACACGAAGCTTCCAGAACCATAAAATATCCCGTCG...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCATGCATGAGCTCGAGTaGCTAGAACTTCAAAACTGT +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSMHELE*LELQNC
Trigger: ACAGTTTTGAAGTTCTAGCCACTCGAGCTCATGCAT...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCTTCCTATTTTGCTTGTaGTTTAAAGGCTGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSFLFCL*FKGCSG
Trigger: CCCAGAACAGCCTTTAAATCACAAGCAAAATAGGAA...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR TCA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCTTTTCAAAGATAACGTaGCAACTACCATCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSFSKIT*QLPSRG
Trigger: TCCTCTAGATGGTAGTTGTCACGTTATCTTTGAAAA...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS TCA 90 bp TGCAGGAGACATTGGGCTGCCCGGCGGCGGCGGCGGCGGTGCTGTTaGCCCCCATCAAGCGGTGCATGGACGGCGCGGCGGCGCGGCGCG +
Preference number: 5 (lower is better)
Translates to: CRRHWAARRRRRRCC*PPSSGAWTARRRGA
Trigger: CGCGCCGCGCCGCCGCGCCGTCCATGCACCGCTTGATGGGGGTCAACAGCACCGCCGCCGCCGCCGCCGGGCAGCCCAATGTCTCCTGCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341744.8
ENST00000395819.3
CDS CCA 90 bp GGAAGCGCTCCCGCTGGGCGAAGGGCGGCACGGCCAGGCGGTCGGTaGGCCGAGGCGGGGCGTAGACCTGCGGCTCTGGGATTCCGTTGC +
Preference number: 5 (lower is better)
Translates to: GSAPAGRRAARPGGR*AEAGRRPAALGFRC
Trigger: GCAACGGAATCCCAGAGCCGCAGGTCTACGCCCCGCCTCGGCCCACCGACCGCCTGGCCGTGCCGCCCTTCGCCCAGCGGGAGCGCTTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395814.5
ENST00000395816.7
ENST00000395819.3
ENST00000414037.5
CDS CCA 90 bp TTGCTCCAGATGGCTGCGCTCTCTAGGGGCGCGATGTGTGTGTGGTaGAGCCGGGTCCCCTCCAGCAAGGAGGGCGGCCCACTGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LLQMAALSRGAMCVW*SRVPSSKEGGPLLC
Trigger: GCAGAGCAGTGGGCCGCCCTCCTTGCTGGAGGGGACCCGGCTCCACCACACACACATCGCGCCCCTAGAGAGCGCAGCCATCTGGAGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395814.5
ENST00000395816.7
CDS CCA 90 bp TCTTTGCTCCAGATGGCTGCGCTCTCTAGGGGCGCGATGTGTGTGTaGTGGAGCCGGGTCCCCTCCAGCAAGGAGGGCGGCCCACTGCTC +
Preference number: 5 (lower is better)
Translates to: SLLQMAALSRGAMCV*WSRVPSSKEGGPLL
Trigger: GAGCAGTGGGCCGCCCTCCTTGCTGGAGGGGACCCGGCTCCACCACACACACATCGCGCCCCTAGAGAGCGCAGCCATCTGGAGCAAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395814.5
ENST00000395816.7
CDS GCA 90 bp TGGAACAAAGAGCGTTTGCAGTTGCACGTGCAGGAGACATTGGGCTaGCCGGCGGCGGCGGCGGCGGTGCTGTTGACCCCCATCAAGCGG +
Preference number: 5 (lower is better)
Translates to: WNKERLQLHVQETLG*PAAAAAVLLTPIKR
Trigger: CCGCTTGATGGGGGTCAACAGCACCGCCGCCGCCGCCGCCGGGCAGCCCAATGTCTCCTGCACGTGCAACTGCAAACGCTCTTTGTTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341744.8
ENST00000395819.3
CDS-3UTR CAA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAGGATGCGCCCAGCCTTaGAGAGGCCACTACCCCATG +
Preference number: 5 (lower is better)
Translates to: KYRVLRSGDVGARPACHGGCAQP*RGHYPM
Trigger: CATGGGGTAGTGGCCTCTCAAAGGCTGGGCGCATCC...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAAAACCTGCTGGCTGTCTaGGGATGCGCCCAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: GLSADSTGAHPLPSGDSENLLAV*GCAQPL
Trigger: CAAAGGCTGGGCGCATCCCAAGACAGCCAGCAGGTT...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAAACTCCAGCTCCGCCATaGCCTGGTTTCGCAGGAGAC +
Preference number: 5 (lower is better)
Translates to: GLSADSTGAHPLPSGDSETPAPP*PGFAGD
Trigger: GTCTCCTGCGAAACCAGGCAATGGCGGAGCTGGAGT...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000347215.8
CDS GCA 90 bp GCGGGGCGTAGACCTGCGGCTCTGGGATTCCGTTGCCTGACACTGTaGTCTCCGAGGGCCACAGGCATCCTTCTGAGGACAGGGCATCTT +
Preference number: 5 (lower is better)
Translates to: AGRRPAALGFRCLTL*SPRATGILLRTGHL
Trigger: AAGATGCCCTGTCCTCAGAAGGATGCCTGTGGCCCTCGGAGAGCACAGTGTCAGGCAACGGAATCCCAGAGCCGCAGGTCTACGCCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395814.5
ENST00000395816.7
ENST00000395819.3
ENST00000414037.5
CDS-3UTR CAA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAGGCTCTGGGATTCCGTaGCCTGACACTGTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: KYRVLRSGDVGARPACHGGSGIP*PDTVLS
Trigger: GGAGAGCACAGTGTCAGGCAACGGAATCCCAGAGCC...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAACGCCCGAAGCTCGGGTaGGTGTTTGCTCAACTGCTT +
Preference number: 5 (lower is better)
Translates to: GLSADSTGAHPLPSGDSERPKLG*VFAQLL
Trigger: AAGCAGTTGAGCAAACACCAACCCGAGCTTCGGGCG...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGCACGTGCAGGAGACATaGGGCTGCCCGGCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQHVQET*GCPAAA
Trigger: CGCCGCCGCCGGGCAGCCCAATGTCTCCTGCACGTG...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341744.8
CDS TCA 90 bp ACTGTCCGCCTTCAGTTCTCCAGCAGCTCGGGGATCATGGCCCACTaGACCCCCAAGCGCTTTCACCCGAACCCAAGGAGGACGACCAGG +
Preference number: 5 (lower is better)
Translates to: TVRLQFSSSSGIMAH*TPKRFHPNPRRTTR
Trigger: CCTGGTCGTCCTCCTTGGGTTCGGGTGAAAGCGCTTGGGGGTTCAGTGGGCCATGATCCCCGAGCTGCTGGAGAACTGAAGGCGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000347215.8
CDS CCA 90 bp AGGGGCCGCCCAGCCTGGCACTATCCATCAGGTCACTGTCGAAGATaGTTCTGTTTGGGGGTGCGCGCACCGACTCCCGGTTCAGTTCCA +
Preference number: 5 (lower is better)
Translates to: RGRPAWHYPSGHCRR*FCLGVRAPTPGSVP
Trigger: TGGAACTGAACCGGGAGTCGGTGCGCGCACCCCCAAACAGAACCATCTTCGACAGTGACCTGATGGATAGTGCCAGGCTGGGCGGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395814.5
ENST00000395816.7
ENST00000414037.5
CDS TCA 90 bp AGCCGGTGCAGGAAGTGGGTTCCCGCTCTCCCTGCACAGGCACAGTaGTGCTGCCAGAGCTCTCCCAGAAAGACCAGGAGGCTTGTTCTG +
Preference number: 5 (lower is better)
Translates to: SRCRKWVPALPAQAQ*CCQSSPRKTRRLVL
Trigger: CAGAACAAGCCTCCTGGTCTTTCTGGGAGAGCTCTGGCAGCATCACTGTGCCTGTGCAGGGAGAGCGGGAACCCACTTCCTGCACCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265626.8
ENST00000472841.1
CDS GCA 90 bp GGCACTATCCATCAGGTCACTGTCGAAGATGGTTCTGTTTGGGGGTaGGCGCACCGACTCCCGGTTCAGTTCCAGCTGCTGCTCGGGGTC +
Preference number: 5 (lower is better)
Translates to: GTIHQVTVEDGSVWG*AHRLPVQFQLLLGV
Trigger: GACCCCGAGCAGCAGCTGGAACTGAACCGGGAGTCGGTGCGCGCACCCCCAAACAGAACCATCTTCGACAGTGACCTGATGGATAGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395814.5
ENST00000395816.7
ENST00000414037.5
CDS-3UTR CAA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCGCTGGTCCAAGCTCTTaGGAGGAGTCCAAGCGTGCC +
Preference number: 5 (lower is better)
Translates to: VDWHPNTESYAAGTWVRAAGPSS*EESKRA
Trigger: GGCACGCTTGGACTCCTCCAAAGAGCTTGGACCAGC...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265626.8
CDS-3UTR CAA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCGAAGATGGTTCTGTTaGGGGGTGCGCGCACCGACT +
Preference number: 5 (lower is better)
Translates to: VDWHPNTESYAAGTWVRARRWFC*GVRAPT
Trigger: AGTCGGTGCGCGCACCCCCAAACAGAACCATCTTCG...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp CAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCCCTGGTAGCCAACCTGCTGGCTGTCTaGGGATGCGCCCAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: QSALQRQVIEPSGMSLVANLLAV*GCAQPL
Trigger: CAAAGGCTGGGCGCATCCCAAGACAGCCAGCAGGTT...GGCTACCAGGGACATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS CCA 90 bp CAGCCTGGCACTATCCATCAGGTCACTGTCGAAGATGGTTCTGTTTaGGGGTGCGCGCACCGACTCCCGGTTCAGTTCCAGCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: QPGTIHQVTVEDGSV*GCAHRLPVQFQLLL
Trigger: GAGCAGCAGCTGGAACTGAACCGGGAGTCGGTGCGCGCACCCCCAAACAGAACCATCTTCGACAGTGACCTGATGGATAGTGCCAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395814.5
ENST00000395816.7
ENST00000414037.5
CDS-3UTR CAA 90 bp AAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCCGCATGCCACGGAGGGAGAAACCCAGGCTaGTCACCTTTTCATGTTGGG +
Preference number: 5 (lower is better)
Translates to: KYRVLRSGDVGARPACHGGRNPG*SPFHVG
Trigger: CCCAACATGAAAAGGTGACAAGCCTGGGTTTCTCCC...TCCGTGGCATGCGGGGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp CAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGTCCCTGGTAGCCCGCCCGAAGCTCGGGTaGGTGTTTGCTCAACTGCTT +
Preference number: 5 (lower is better)
Translates to: QSALQRQVIEPSGMSLVARPKLG*VFAQLL
Trigger: AAGCAGTTGAGCAAACACCAACCCGAGCTTCGGGCG...GGCTACCAGGGACATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGTGCGCGCCCGCCCGAAGCTCGGGTaGGTGTTTGCTCAACTGCTT +
Preference number: 5 (lower is better)
Translates to: VDWHPNTESYAAGTWVRARPKLG*VFAQLL
Trigger: AAGCAGTTGAGCAAACACCAACCCGAGCTTCGGGCG...GGCGCGCACCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGGGATGCGCCCAGCCTTaGAGAGGCCACTACCCCATG +
Preference number: 5 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGGCAQP*RGHYPM
Trigger: CATGGGGTAGTGGCCTCTCAAAGGCTGGGCGCATCC...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS GCA 90 bp AGAACTCAGAGAAAGCCGGTGCAGGAAGTGGGTTCCCGCTCTCCCTaGACAGGCACAGTGATGCTGCCAGAGCTCTCCCAGAAAGACCAG +
Preference number: 5 (lower is better)
Translates to: RTQRKPVQEVGSRSP*TGTVMLPELSQKDQ
Trigger: CTGGTCTTTCTGGGAGAGCTCTGGCAGCATCACTGTGCCTGTGCAGGGAGAGCGGGAACCCACTTCCTGCACCGGCTTTCTCTGAGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265626.8
ENST00000472841.1
CDS-3UTR CAA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGGGCTCTGGGATTCCGTaGCCTGACACTGTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGGSGIP*PDTVLS
Trigger: GGAGAGCACAGTGTCAGGCAACGGAATCCCAGAGCC...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGCGAAGATGGTTCTGTTaGGGGGTGCGCGCACCGACT +
Preference number: 5 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGRRWFC*GVRAPT
Trigger: AGTCGGTGCGCGCACCCCCAAACAGAACCATCTTCG...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTACCAGAAGGGAAGCGTaGTTTCCGCGGGGAAAGGAG +
Preference number: 5 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSTRREA*FPRGKE
Trigger: CTCCTTTCCCCGCGGAAACAACGCTTCCCTTCTGGT...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGAACCTGCTGGCTGTCTaGGGATGCGCCCAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGNLLAV*GCAQPL
Trigger: CAAAGGCTGGGCGCATCCCAAGACAGCCAGCAGGTT...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACAACCTGCTGGCTGTCTaGGGATGCGCCCAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHNLLAV*GCAQPL
Trigger: CAAAGGCTGGGCGCATCCCAAGACAGCCAGCAGGTT...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTGCGGCGGCGGTGCTGTaGACCCCCATCAAGCGGTGC +
Preference number: 5 (lower is better)
Translates to: ETKLVPFQSATSENPHLTAAAVL*TPIKRC
Trigger: GCACCGCTTGATGGGGGTCAACAGCACCGCCGCCGC...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341744.8
CDS CCA 90 bp AGAAAGACCAGGAGGCTTGTTCTGGAGAAGTCAAGCCCAGGGATGTaGCTCAGGCTGGTCCAAGCTCTTTGGAGGAGTCCAAGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: RKTRRLVLEKSSPGM*LRLVQALWRSPSVP
Trigger: GGGCACGCTTGGACTCCTCCAAAGAGCTTGGACCAGCCTGAGCCACATCCCTGGGCTTGACTTCTCCAGAACAAGCCTCCTGGTCTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265626.8
ENST00000472841.1
CDS CCA 90 bp AGTGATGCTGCCAGAGCTCTCCCAGAAAGACCAGGAGGCTTGTTCTaGAGAAGTCAAGCCCAGGGATGTGGCTCAGGCTGGTCCAAGCTC +
Preference number: 5 (lower is better)
Translates to: SDAARALPERPGGLF*RSQAQGCGSGWSKL
Trigger: GAGCTTGGACCAGCCTGAGCCACATCCCTGGGCTTGACTTCTCCAGAACAAGCCTCCTGGTCTTTCTGGGAGAGCTCTGGCAGCATCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265626.8
ENST00000472841.1
CDS-3UTR CAA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATCAGGAGGAGGTCAGATaGCGAATACCTGGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: AEQPPKRPAETSHRALWHQEEVR*RIPGAS
Trigger: GGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCTG...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGACCAGAAGGGAAGCGTaGTTTCCGCGGGGAAAGGAG +
Preference number: 5 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGTRREA*FPRGKE
Trigger: CTCCTTTCCCCGCGGAAACAACGCTTCCCTTCTGGT...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTCCCCTGAAACGAAGCTaGTCCCCTTCCAATCAGCCA +
Preference number: 5 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSPLKRS*SPSNQP
Trigger: TGGCTGATTGGAAGGGGACAAGCTTCGTTTCAGGGG...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGCAGGAGGAGGTCAGATaGCGAATACCTGGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQQEEVR*RIPGAS
Trigger: GGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCTG...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCAGCTCGGGTTGGTGTTaGCTCAACTGCTTTACTCAT +
Preference number: 5 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQISSGWC*LNCFTH
Trigger: ATGAGTAAAGCAGTTGAGCAAACACCAACCCGAGCT...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCAACCAGAAGGGAAGCGTaGTTTCCGCGGGGAAAGGAG +
Preference number: 5 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSTRREA*FPRGKE
Trigger: CTCCTTTCCCCGCGGAAACAACGCTTCCCTTCTGGT...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GGCCTCTCTGCAGACTCCACGGGGGCTCACCCTCTGCCGTCAGGCGACTCTGAAGTCCCTTTTCATTCTTaGCAAAAACACTGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: GLSADSTGAHPLPSGDSEVPFHS*QKHWAF
Trigger: GAAAGCCCAGTGTTTTTGCAAAGAATGAAAAGGGAC...TTCAGAGTCGCCTGACGGCAGAGGGTGAGCCCCCGTGGAGTCTGCAGAGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp AGGAGGAGGTCAGATTGCGAATACCTGGGGCTTCCTAGGGTCCAGTGCGGCAGTTGTTTATCCTTCTCTTaGCTCCAGATGGCTGCGCTC +
Preference number: 5 (lower is better)
Translates to: RRRSDCEYLGLPRVQCGSCLSFS*LQMAAL
Trigger: GAGCGCAGCCATCTGGAGCAAAGAGAAGGATAAACA...ACTGCCGCACTGGACCCTAGGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGGGAGAAACCCAGGCTaGTCACCTTTTCATGTTGGG +
Preference number: 5 (lower is better)
Translates to: AEQPPKRPAETSHRALWHGRNPG*SPFHVG
Trigger: CCCAACATGAAAAGGTGACAAGCCTGGGTTTCTCCC...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATTGGAACAAAGAGCGTTaGCAGTTGCACGTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: AEQPPKRPAETSHRALWHWNKER*QLHVQE
Trigger: CTCCTGCACGTGCAACTGCAAACGCTCTTTGTTCCA...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341744.8
CDS-3UTR CAA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAGGAGGAGGTCAGATaGCGAATACCTGGGGCTTCC +
Preference number: 5 (lower is better)
Translates to: QRRAVPTPGTNVKALESAQEEVR*RIPGAS
Trigger: GGAAGCCCCAGGTATTCGCAATCTGACCTCCTCCTG...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAACCAGAAGGGAAGCGTaGTTTCCGCGGGGAAAGGAG +
Preference number: 5 (lower is better)
Translates to: ESSSHARNQRESIGISTTTRREA*FPRGKE
Trigger: CTCCTTTCCCCGCGGAAACAACGCTTCCCTTCTGGT...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATCGAGACCCAAACAGTTaGGCTCAAGAGGATATGAGG +
Preference number: 5 (lower is better)
Translates to: AEQPPKRPAETSHRALWHRDPNS*AQEDMR
Trigger: CCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCG...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATAAAGAGCGTTTGCAGTaGCACGTGCAGGAGACATTG +
Preference number: 5 (lower is better)
Translates to: AEQPPKRPAETSHRALWHKERLQ*HVQETL
Trigger: CAATGTCTCCTGCACGTGCAACTGCAAACGCTCTTT...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341744.8
CDS-3UTR CAA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGTGTTTATCCTTCTCTTaGCTCCAGATGGCTGCGCTC +
Preference number: 5 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQCLSFS*LQMAAL
Trigger: GAGCGCAGCCATCTGGAGCAAAGAGAAGGATAAACA...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATGCAAGCTCTCTTAGCTaGTGCATTCAGACCAGACAT +
Preference number: 5 (lower is better)
Translates to: AEQPPKRPAETSHRALWHASSLS*CIQTRH
Trigger: ATGTCTGGTCTGAATGCACAAGCTAAGAGAGCTTGC...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GGCATGCAGAGCCCACGTCTGTCAGCTGCCACCTTCGTAAAGCACACGTTTCACGCAAGCTCTCTTAGCTaGTGCATTCAGACCAGACAT +
Preference number: 5 (lower is better)
Translates to: GMQSPRLSAATFVKHTFHASSLS*CIQTRH
Trigger: ATGTCTGGTCTGAATGCACAAGCTAAGAGAGCTTGC...GTGAAACGTGTGCTTTACGAAGGTGGCAGCTGACAGACGTGGGCTCTGCATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp CCCCTTCCTGTCCTTCACCTGCACGTCACCAGCAGGTCCCGCCAACCCCAAATCCCTTTTCATGTTGGGTaGTTTATTGGCCTCTTAAGT +
Preference number: 5 (lower is better)
Translates to: PLPVLHLHVTSRSRQPQIPFHVG*FIGLLS
Trigger: ACTTAAGAGGCCAATAAACAACCCAACATGAAAAGG...GATTTGGGGTTGGCGGGACCTGCTGGTGACGTGCAGGTGAAGGACAGGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GCTGAACAACCACCAAAGCGCCCTGCAGAGACAAGTCATCGAGCCCTCTGGCATAGGCAGGTTCTGCTGTaGCCAATGAACGAGAACTTT +
Preference number: 5 (lower is better)
Translates to: AEQPPKRPAETSHRALWHRQVLL*PMNENF
Trigger: AAAGTTCTCGTTCATTGGCAACAGCAGAACCTGCCT...ATGCCAGAGGGCTCGATGACTTGTCTCTGCAGGGCGCTTTGGTGGTTGTTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCACTTCAGGCCTGTGGATaGGCATCCAAATACAGAGTC +
Preference number: 5 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSLQACG*ASKYRV
Trigger: GACTCTGTATTTGGATGCCAATCCACAGGCCTGAAG...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp TACAAGTGCGTCCTTGTACCTTTCGGGATAACCTGTACTGATTTCTCTGCAGGACGAAGATGGTTCTGTTaGGGGGTGCGCGCACCGACT +
Preference number: 5 (lower is better)
Translates to: YKCVLVPFGITCTDFSAGRRWFC*GVRAPT
Trigger: AGTCGGTGCGCGCACCCCCAAACAGAACCATCTTCG...TCCTGCAGAGAAATCAGTACAGGTTATCCCGAAAGGTACAAGGACGCACTTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GAACCAGGATGGAACGGCAGACCCCTGAAACGAAGCTTGTCCCCTTCCAATCAGGCAAGCTCTCTTAGCTaGTGCATTCAGACCAGACAT +
Preference number: 5 (lower is better)
Translates to: EPGWNGRPLKRSLSPSNQASSLS*CIQTRH
Trigger: ATGTCTGGTCTGAATGCACAAGCTAAGAGAGCTTGC...CTGATTGGAAGGGGACAAGCTTCGTTTCAGGGGTCTGCCGTTCCATCCTGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGGGGAGAAACCCAGGCTaGTCACCTTTTCATGTTGGG +
Preference number: 5 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTEGRNPG*SPFHVG
Trigger: CCCAACATGAAAAGGTGACAAGCCTGGGTTTCTCCC...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGGGGAGAAACCCAGGCTaGTCACCTTTTCATGTTGGG +
Preference number: 5 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWGRNPG*SPFHVG
Trigger: CCCAACATGAAAAGGTGACAAGCCTGGGTTTCTCCC...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCAAGGCAGGTTCTGCTGTaGCCAATGAACGAGAACTTT +
Preference number: 5 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSRQVLL*PMNENF
Trigger: AAAGTTCTCGTTCATTGGCAACAGCAGAACCTGCCT...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGGGATGCGCCCAGCCTTaGAGAGGCCACTACCCCATG +
Preference number: 5 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKGCAQP*RGHYPM
Trigger: CATGGGGTAGTGGCCTCTCAAAGGCTGGGCGCATCC...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTCCCCTGAAACGAAGCTaGTCCCCTTCCAATCAGCCA +
Preference number: 5 (lower is better)
Translates to: ETKLVPFQSATSENPHLTPLKRS*SPSNQP
Trigger: TGGCTGATTGGAAGGGGACAAGCTTCGTTTCAGGGG...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGGGCTCTGGGATTCCGTaGCCTGACACTGTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKGSGIP*PDTVLS
Trigger: GGAGAGCACAGTGTCAGGCAACGGAATCCCAGAGCC...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp AACTTCTGCCATCCACTGGACATGAAGCTGAGGACACTGGGCTTCAACACTGAGTGTTTATCCTTCTCTTaGCTCCAGATGGCTGCGCTC +
Preference number: 5 (lower is better)
Translates to: NFCHPLDMKLRTLGFNTECLSFS*LQMAAL
Trigger: GAGCGCAGCCATCTGGAGCAAAGAGAAGGATAAACA...CTCAGTGTTGAAGCCCAGTGTCCTCAGCTTCATGTCCAGTGGATGGCAGAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACGAGACCCAAACAGTTaGGCTCAAGAGGATATGAGG +
Preference number: 5 (lower is better)
Translates to: QRRAVPTPGTNVKALESARDPNS*AQEDMR
Trigger: CCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCG...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGCGAGACCCAAACAGTTaGGCTCAAGAGGATATGAGG +
Preference number: 5 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWRDPNS*AQEDMR
Trigger: CCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCG...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACTTCAGGCCTGTGGATaGGCATCCAAATACAGAGTC +
Preference number: 5 (lower is better)
Translates to: QRRAVPTPGTNVKALESALQACG*ASKYRV
Trigger: GACTCTGTATTTGGATGCCAATCCACAGGCCTGAAG...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACACTTCAGGCCTGTGGATaGGCATCCAAATACAGAGTC +
Preference number: 5 (lower is better)
Translates to: ESSSHARNQRESIGISTTLQACG*ASKYRV
Trigger: GACTCTGTATTTGGATGCCAATCCACAGGCCTGAAG...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGCTTCAGGCCTGTGGATaGGCATCCAAATACAGAGTC +
Preference number: 5 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWLQACG*ASKYRV
Trigger: GACTCTGTATTTGGATGCCAATCCACAGGCCTGAAG...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCCGAAGATGGTTCTGTTaGGGGGTGCGCGCACCGACT +
Preference number: 5 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSRRWFC*GVRAPT
Trigger: AGTCGGTGCGCGCACCCCCAAACAGAACCATCTTCG...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp TCAGGCCTGTGGATTGGCATCCAAATACAGAGTCTTACGCAGCGGGGACGTGGGCCTTTTCATGTTGGGTaGTTTATTGGCCTCTTAAGT +
Preference number: 5 (lower is better)
Translates to: SGLWIGIQIQSLTQRGRGPFHVG*FIGLLS
Trigger: ACTTAAGAGGCCAATAAACAACCCAACATGAAAAGG...CCCACGTCCCCGCTGCGTAAGACTCTGTATTTGGATGCCAATCCACAGGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp CAACGAGACCCAAACAGTTTGGCTCAAGAGGATATGAGGACTGTCTCAGCCTGGAGCTCGGGTTGGTGTTaGCTCAACTGCTTTACTCAT +
Preference number: 5 (lower is better)
Translates to: QRDPNSLAQEDMRTVSAWSSGWC*LNCFTH
Trigger: ATGAGTAAAGCAGTTGAGCAAACACCAACCCGAGCT...CCAGGCTGAGACAGTCCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACAACAAGGCAGGTTCTGCTGTaGCCAATGAACGAGAACTTT +
Preference number: 5 (lower is better)
Translates to: ESSSHARNQRESIGISTTRQVLL*PMNENF
Trigger: AAAGTTCTCGTTCATTGGCAACAGCAGAACCTGCCT...TGTTGTGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GAAACGAAGCTTGTCCCCTTCCAATCAGCCACTTCTGAGAACCCCCATCTAACTCGAGACCCAAACAGTTaGGCTCAAGAGGATATGAGG +
Preference number: 5 (lower is better)
Translates to: ETKLVPFQSATSENPHLTRDPNS*AQEDMR
Trigger: CCTCATATCCTCTTGAGCCAAACTGTTTGGGTCTCG...AGTTAGATGGGGGTTCTCAGAAGTGGCTGATTGGAAGGGGACAAGCTTCGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp CCCCGCCTTCCTCTCACTCCTCTTCTAAGAAGCGCGGAGTGTTCTGCCTTTTCAGTCCCTTTTCATTCTTaGCAAAAACACTGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: PRLPLTPLLRSAECSAFSVPFHS*QKHWAF
Trigger: GAAAGCCCAGTGTTTTTGCAAAGAATGAAAAGGGAC...TGAAAAGGCAGAACACTCCGCGCTTCTTAGAAGAGGAGTGAGAGGAAGGCGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp CGGGAGTGTCACTGCTTCTTCAGTAAGGCACTAGAGACGCGTCACATAAAGGAAAGCTCGGGTTGGTGTTaGCTCAACTGCTTTACTCAT +
Preference number: 5 (lower is better)
Translates to: RECHCFFSKALETRHIKESSGWC*LNCFTH
Trigger: ATGAGTAAAGCAGTTGAGCAAACACCAACCCGAGCT...TTCCTTTATGTGACGCGTCTCTAGTGCCTTACTGAAGAAGCAGTGACACTCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGCCCCTGAAACGAAGCTaGTCCCCTTCCAATCAGCCA +
Preference number: 5 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKPLKRS*SPSNQP
Trigger: TGGCTGATTGGAAGGGGACAAGCTTCGTTTCAGGGG...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp ATTTGTGAAATCTGTGTAGAACCGGGCTTTGCAGGGGAGATAATTTTCCTCCTCGAAAGACCAGGAGGCTaGTTCTGGAGAAGTCAAGCC +
Preference number: 5 (lower is better)
Translates to: ICEICVEPGFAGEIIFLLERPGG*FWRSQA
Trigger: GGCTTGACTTCTCCAGAACAAGCCTCCTGGTCTTTC...GAGGAGGAAAATTATCTCCCCTGCAAAGCCCGGTTCTACACAGATTTCACAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265626.8
CDS-3UTR CAA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCCCCCTGAAACGAAGCTaGTCCCCTTCCAATCAGCCA +
Preference number: 5 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSPLKRS*SPSNQP
Trigger: TGGCTGATTGGAAGGGGACAAGCTTCGTTTCAGGGG...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp CAAAGGAGAGCAGTTCCCACGCCAGGAACCAACGTGAAAGCATTGGAATCAGCACCTTTTCATGTTGGGTaGTTTATTGGCCTCTTAAGT +
Preference number: 5 (lower is better)
Translates to: QRRAVPTPGTNVKALESAPFHVG*FIGLLS
Trigger: ACTTAAGAGGCCAATAAACAACCCAACATGAAAAGG...TGCTGATTCCAATGCTTTCACGTTGGTTCCTGGCGTGGGAACTGCTCTCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGGTCCCTTTTCATTCTTaGCAAAAACACTGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKVPFHS*QKHWAF
Trigger: GAAAGCCCAGTGTTTTTGCAAAGAATGAAAAGGGAC...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp GAGAAACCCAGGCTTGTCACCTTTTCATGTTGGGTTGTTTATTGGCCTCTTAAGCCTTTTCATGTTGGGTaGTTTATTGGCCTCTTAAGT +
Preference number: 5 (lower is better)
Translates to: EKPRLVTFSCWVVYWPLKPFHVG*FIGLLS
Trigger: ACTTAAGAGGCCAATAAACAACCCAACATGAAAAGG...CTTAAGAGGCCAATAAACAACCCAACATGAAAAGGTGACAAGCCTGGGTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS-3UTR CAA 90 bp TCCGACATTTCTCCCTTAAAGTCTCAACAGACACAAGAGAAGTTTCCATCAAGCGTCCCTTTTCATTCTTaGCAAAAACACTGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: SDISPLKSQQTQEKFPSSVPFHS*QKHWAF
Trigger: GAAAGCCCAGTGTTTTTGCAAAGAATGAAAAGGGAC...GCTTGATGGAAACTTCTCTTGTGTCTGTTGAGACTTTAAGGGAGAAATGTCGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395816.7
CDS CAA 90 bp GTGCAGGAGACATTGGGCTGCCCGGCGGCGGCGGCGGCGGTGCTGTaGACCCCCATCAAGCGGTGCATGGACGGCGCGGCGGCGCGGCGC +
Preference number: 6 (lower is better)
Translates to: VQETLGCPAAAAAVL*TPIKRCMDGAAARR
Trigger: GCGCCGCGCCGCCGCGCCGTCCATGCACCGCTTGATGGGGGTCAACAGCACCGCCGCCGCCGCCGCCGGGCAGCCCAATGTCTCCTGCAC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341744.8
ENST00000395819.3
CDS TCA 72 bp CATTGGGCTGCCCGGCGGCGGCGGCGGCGGTGCTGTTaGCCCCCATCAAGCGGTGCATGGACGGCGCGGCGG +
Preference number: 6 (lower is better)
Translates to: HWAARRRRRRCC*PPSSGAWTARR
Trigger: CCGCCGCGCCGTCCATGCACCGCTTGATGGGGGTCAACAGCACCGCCGCCGCCGCCGCCGGGCAGCCCAATG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341744.8
ENST00000395819.3
CDS CAA 72 bp ACATTGGGCTGCCCGGCGGCGGCGGCGGCGGTGCTGTaGACCCCCATCAAGCGGTGCATGGACGGCGCGGCG +
Preference number: 6 (lower is better)
Translates to: TLGCPAAAAAVL*TPIKRCMDGAA
Trigger: CGCCGCGCCGTCCATGCACCGCTTGATGGGGGTCAACAGCACCGCCGCCGCCGCCGCCGGGCAGCCCAATGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341744.8
ENST00000395819.3
CDS GCA 72 bp GAGCGTTTGCAGTTGCACGTGCAGGAGACATTGGGCTaGCCGGCGGCGGCGGCGGCGGTGCTGTTGACCCCC +
Preference number: 6 (lower is better)
Translates to: ERLQLHVQETLG*PAAAAAVLLTP
Trigger: GGGGGTCAACAGCACCGCCGCCGCCGCCGCCGGGCAGCCCAATGTCTCCTGCACGTGCAACTGCAAACGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341744.8
ENST00000395819.3
CDS CCA 72 bp ATGGCTGCGCTCTCTAGGGGCGCGATGTGTGTGTGGTaGAGCCGGGTCCCCTCCAGCAAGGAGGGCGGCCCA +
Preference number: 6 (lower is better)
Translates to: MAALSRGAMCVW*SRVPSSKEGGP
Trigger: TGGGCCGCCCTCCTTGCTGGAGGGGACCCGGCTCCACCACACACACATCGCGCCCCTAGAGAGCGCAGCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395814.5
ENST00000395816.7
CDS CCA 72 bp CAGATGGCTGCGCTCTCTAGGGGCGCGATGTGTGTGTaGTGGAGCCGGGTCCCCTCCAGCAAGGAGGGCGGC +
Preference number: 6 (lower is better)
Translates to: QMAALSRGAMCV*WSRVPSSKEGG
Trigger: GCCGCCCTCCTTGCTGGAGGGGACCCGGCTCCACCACACACACATCGCGCCCCTAGAGAGCGCAGCCATCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395814.5
ENST00000395816.7
CDS GCA 72 bp GAGGCGGGGCGTAGACCTGCGGCTCTGGGATTCCGTTaGCTGACACTGTGCTCTCCGAGGGCCACAGGCATC +
Preference number: 6 (lower is better)
Translates to: EAGRRPAALGFR*LTLCSPRATGI
Trigger: GATGCCTGTGGCCCTCGGAGAGCACAGTGTCAGGCAACGGAATCCCAGAGCCGCAGGTCTACGCCCCGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395814.5
ENST00000395816.7
ENST00000395819.3
ENST00000414037.5
CDS TCA 72 bp CGGGGCGTAGACCTGCGGCTCTGGGATTCCGTTGCCTaGCACTGTGCTCTCCGAGGGCCACAGGCATCCTTC +
Preference number: 6 (lower is better)
Translates to: RGVDLRLWDSVA*HCALRGPQASF
Trigger: GAAGGATGCCTGTGGCCCTCGGAGAGCACAGTGTCAGGCAACGGAATCCCAGAGCCGCAGGTCTACGCCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395814.5
ENST00000395816.7
ENST00000395819.3
ENST00000414037.5
CDS GCA 72 bp CCATGCTCTGGAACAAAGAGCGTTTGCAGTTGCACGTaGAGGAGACATTGGGCTGCCCGGCGGCGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: PCSGTKSVCSCT*RRHWAARRRRR
Trigger: CCGCCGCCGCCGCCGGGCAGCCCAATGTCTCCTGCACGTGCAACTGCAAACGCTCTTTGTTCCAGAGCATGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341744.8
ENST00000395819.3
CDS CAA 72 bp AACAAAGAGCGTTTGCAGTTGCACGTGCAGGAGACATaGGGCTGCCCGGCGGCGGCGGCGGCGGTGCTGTTG +
Preference number: 6 (lower is better)
Translates to: NKERLQLHVQET*GCPAAAAAVLL
Trigger: CAACAGCACCGCCGCCGCCGCCGCCGGGCAGCCCAATGTCTCCTGCACGTGCAACTGCAAACGCTCTTTGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341744.8
ENST00000395819.3
CDS CAA 90 bp ATGCTCTGGAACAAAGAGCGTTTGCAGTTGCACGTGCAGGAGACATaGGGCTGCCCGGCGGCGGCGGCGGCGGTGCTGTTGACCCCCATC +
Preference number: 6 (lower is better)
Translates to: MLWNKERLQLHVQET*GCPAAAAAVLLTPI
Trigger: GATGGGGGTCAACAGCACCGCCGCCGCCGCCGCCGGGCAGCCCAATGTCTCCTGCACGTGCAACTGCAAACGCTCTTTGTTCCAGAGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341744.8
ENST00000395819.3
CDS CAA 90 bp TCCAGCTCCGTGATCTCCATGCTCTGGAACAAAGAGCGTTTGCAGTaGCACGTGCAGGAGACATTGGGCTGCCCGGCGGCGGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: SSSVISMLWNKERLQ*HVQETLGCPAAAAA
Trigger: CGCCGCCGCCGCCGCCGGGCAGCCCAATGTCTCCTGCACGTGCAACTGCAAACGCTCTTTGTTCCAGAGCATGGAGATCACGGAGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341744.8
CDS CCA 72 bp AGCCCAGGGATGTGGCTCAGGCTGGTCCAAGCTCTTTaGAGGAGTCCAAGCGTGCCCAGCCCAGAGGGAGGT +
Preference number: 6 (lower is better)
Translates to: SPGMWLRLVQAL*RSPSVPSPEGG
Trigger: ACCTCCCTCTGGGCTGGGCACGCTTGGACTCCTCCAAAGAGCTTGGACCAGCCTGAGCCACATCCCTGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265626.8
ENST00000472841.1
CDS GCA 72 bp AGAAAGCCGGTGCAGGAAGTGGGTTCCCGCTCTCCCTaGACAGGCACAGTGATGCTGCCAGAGCTCTCCCAG +
Preference number: 6 (lower is better)
Translates to: RKPVQEVGSRSP*TGTVMLPELSQ
Trigger: CTGGGAGAGCTCTGGCAGCATCACTGTGCCTGTGCAGGGAGAGCGGGAACCCACTTCCTGCACCGGCTTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265626.8
ENST00000472841.1
CDS TCA 72 bp CTTCAGTTCTCCAGCAGCTCGGGGATCATGGCCCACTaGACCCCCAAGCGCTTTCACCCGAACCCAAGGAGG +
Preference number: 6 (lower is better)
Translates to: LQFSSSSGIMAH*TPKRFHPNPRR
Trigger: CCTCCTTGGGTTCGGGTGAAAGCGCTTGGGGGTTCAGTGGGCCATGATCCCCGAGCTGCTGGAGAACTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000347215.8
ENST00000395816.7
CDS GCA 72 bp AGACCTGCGGCTCTGGGATTCCGTTGCCTGACACTGTaGTCTCCGAGGGCCACAGGCATCCTTCTGAGGACA +
Preference number: 6 (lower is better)
Translates to: RPAALGFRCLTL*SPRATGILLRT
Trigger: TGTCCTCAGAAGGATGCCTGTGGCCCTCGGAGAGCACAGTGTCAGGCAACGGAATCCCAGAGCCGCAGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395814.5
ENST00000395816.7
ENST00000395819.3
ENST00000414037.5
CDS CCA 72 bp CCAGCCTGGCACTATCCATCAGGTCACTGTCGAAGATaGTTCTGTTTGGGGGTGCGCGCACCGACTCCCGGT +
Preference number: 6 (lower is better)
Translates to: PAWHYPSGHCRR*FCLGVRAPTPG
Trigger: ACCGGGAGTCGGTGCGCGCACCCCCAAACAGAACCATCTTCGACAGTGACCTGATGGATAGTGCCAGGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395814.5
ENST00000395816.7
ENST00000414037.5
CDS CAA 90 bp CCAGCCTGGCACTATCCATCAGGTCACTGTCGAAGATGGTTCTGTTaGGGGGTGCGCGCACCGACTCCCGGTTCAGTTCCAGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: PAWHYPSGHCRRWFC*GVRAPTPGSVPAAA
Trigger: AGCAGCAGCTGGAACTGAACCGGGAGTCGGTGCGCGCACCCCCAAACAGAACCATCTTCGACAGTGACCTGATGGATAGTGCCAGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395814.5
ENST00000395816.7
ENST00000414037.5
CDS CAA 90 bp ACAAACTCCAGCTCCGTGATCTCCATGCTCTGGAACAAAGAGCGTTaGCAGTTGCACGTGCAGGAGACATTGGGCTGCCCGGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: TNSSSVISMLWNKER*QLHVQETLGCPAAA
Trigger: CGCCGCCGCCGGGCAGCCCAATGTCTCCTGCACGTGCAACTGCAAACGCTCTTTGTTCCAGAGCATGGAGATCACGGAGCTGGAGTTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341744.8
CDS GCA 72 bp CATCAGGTCACTGTCGAAGATGGTTCTGTTTGGGGGTaGGCGCACCGACTCCCGGTTCAGTTCCAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: HQVTVEDGSVWG*AHRLPVQFQLL
Trigger: CAGCAGCTGGAACTGAACCGGGAGTCGGTGCGCGCACCCCCAAACAGAACCATCTTCGACAGTGACCTGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395814.5
ENST00000395816.7
ENST00000414037.5
CDS CCA 72 bp GCCAGAGCTCTCCCAGAAAGACCAGGAGGCTTGTTCTaGAGAAGTCAAGCCCAGGGATGTGGCTCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: ARALPERPGGLF*RSQAQGCGSGW
Trigger: CCAGCCTGAGCCACATCCCTGGGCTTGACTTCTCCAGAACAAGCCTCCTGGTCTTTCTGGGAGAGCTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265626.8
ENST00000472841.1
CDS CAA 72 bp GTGATCTCCATGCTCTGGAACAAAGAGCGTTTGCAGTaGCACGTGCAGGAGACATTGGGCTGCCCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: VISMLWNKERLQ*HVQETLGCPAA
Trigger: CGCCGCCGGGCAGCCCAATGTCTCCTGCACGTGCAACTGCAAACGCTCTTTGTTCCAGAGCATGGAGATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341744.8
CDS CAA 72 bp CTGATCTCCATGCTCTGGAACAAAGAGCGTTTGCAGTaGCACGTGCAGGAGACATTGGGCTGCCCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: LISMLWNKERLQ*HVQETLGCPAA
Trigger: CGCCGCCGGGCAGCCCAATGTCTCCTGCACGTGCAACTGCAAACGCTCTTTGTTCCAGAGCATGGAGATCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395819.3
CDS CAA 90 bp AGGCACAGTGATGCTGCCAGAGCTCTCCCAGAAAGACCAGGAGGCTaGTTCTGGAGAAGTCAAGCCCAGGGATGTGGCTCAGGCTGGTCC +
Preference number: 6 (lower is better)
Translates to: RHSDAARALPERPGG*FWRSQAQGCGSGWS
Trigger: GGACCAGCCTGAGCCACATCCCTGGGCTTGACTTCTCCAGAACAAGCCTCCTGGTCTTTCTGGGAGAGCTCTGGCAGCATCACTGTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265626.8
ENST00000472841.1
CDS TCA 72 bp ACCGTGCAGACAGCTTGTAGTGGCTCAGCAGGCACGTaGTCACCACCACCATCACCATCATCACCACCACGA +
Preference number: 6 (lower is better)
Translates to: TVQTACSGSAGT*SPPPSPSSPPR
Trigger: TCGTGGTGGTGATGATGGTGATGGTGGTGGTGATCACGTGCCTGCTGAGCCACTACAAGCTGTCTGCACGGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395814.5
ENST00000395816.7
ENST00000395819.3
ENST00000414037.5
ENST00000472841.1
CDS CCA 72 bp AGGAGGCTTGTTCTGGAGAAGTCAAGCCCAGGGATGTaGCTCAGGCTGGTCCAAGCTCTTTGGAGGAGTCCA +
Preference number: 6 (lower is better)
Translates to: RRLVLEKSSPGM*LRLVQALWRSP
Trigger: TGGACTCCTCCAAAGAGCTTGGACCAGCCTGAGCCACATCCCTGGGCTTGACTTCTCCAGAACAAGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265626.8
ENST00000472841.1
CDS CCA 72 bp ACTATCCATCAGGTCACTGTCGAAGATGGTTCTGTTTaGGGGTGCGCGCACCGACTCCCGGTTCAGTTCCAG +
Preference number: 6 (lower is better)
Translates to: TIHQVTVEDGSV*GCAHRLPVQFQ
Trigger: CTGGAACTGAACCGGGAGTCGGTGCGCGCACCCCCAAACAGAACCATCTTCGACAGTGACCTGATGGATAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395814.5
ENST00000395816.7
ENST00000414037.5
CDS CAA 72 bp GATGCTGCCAGAGCTCTCCCAGAAAGACCAGGAGGCTaGTTCTGGAGAAGTCAAGCCCAGGGATGTGGCTCA +
Preference number: 6 (lower is better)
Translates to: DAARALPERPGG*FWRSQAQGCGS
Trigger: TGAGCCACATCCCTGGGCTTGACTTCTCCAGAACAAGCCTCCTGGTCTTTCTGGGAGAGCTCTGGCAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265626.8
ENST00000472841.1
CDS CAA 72 bp CACTATCCATCAGGTCACTGTCGAAGATGGTTCTGTTaGGGGGTGCGCGCACCGACTCCCGGTTCAGTTCCA +
Preference number: 6 (lower is better)
Translates to: HYPSGHCRRWFC*GVRAPTPGSVP
Trigger: TGGAACTGAACCGGGAGTCGGTGCGCGCACCCCCAAACAGAACCATCTTCGACAGTGACCTGATGGATAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265626.8
ENST00000341744.8
ENST00000347215.8
ENST00000395814.5
ENST00000395816.7
ENST00000414037.5
CDS CAA 72 bp AGCTCCGTGATCTCCATGCTCTGGAACAAAGAGCGTTaGCAGTTGCACGTGCAGGAGACATTGGGCTGCCCG +
Preference number: 6 (lower is better)
Translates to: SSVISMLWNKER*QLHVQETLGCP
Trigger: CGGGCAGCCCAATGTCTCCTGCACGTGCAACTGCAAACGCTCTTTGTTCCAGAGCATGGAGATCACGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341744.8
CDS GCA 72 bp GGATTAATTAACTGTAGCAGGAGGCGGGGTCTCCATTaGTATGGCGGGTGTAGAGGGTCATGTGCAAACAGG +
Preference number: 6 (lower is better)
Translates to: GLINCSRRRGLH*YGGCRGSCANR
Trigger: CCTGTTTGCACATGACCCTCTACACCCGCCATAGCAATGGAGACCCCGCCTCCTGCTACAGTTAATTAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414037.5
CDS CCA 72 bp ACTCTTCCACTCCTGATGCTGATGCGACTTGCATACTaGGAATCCATGACAACTGATCTCCATGCTCTGGAA +
Preference number: 6 (lower is better)
Translates to: TLPLLMLMRLAY*ESMTTDLHALE
Trigger: TTCCAGAGCATGGAGATCAGTTGTCATGGATTCCCAGTATGCAAGTCGCATCAGCATCAGGAGTGGAAGAGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395819.3
CDS GCA 72 bp CTGAACAAACTCCAGCTCCGCTCCATGTGCTGGAATTaGAGGCATTTTGACTTTTCGCCTGTCATTTATCAA +
Preference number: 6 (lower is better)
Translates to: LNKLQLRSMCWN*RHFDFSPVIYQ
Trigger: TTGATAAATGACAGGCGAAAAGTCAAAATGCCTGCAATTCCAGCACATGGAGCGGAGCTGGAGTTTGTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414037.5
CDS CAA 72 bp TCCAGCTCCGCTCCATGTGCTGGAATTGCAGGCATTTaGACTTTTCGCCTGTCATTTATCAAATTCTTTGAA +
Preference number: 6 (lower is better)
Translates to: SSSAPCAGIAGI*TFRLSFIKFFE
Trigger: TTCAAAGAATTTGATAAATGACAGGCGAAAAGTCAAAATGCCTGCAATTCCAGCACATGGAGCGGAGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414037.5