RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PMEL (Homo sapiens)

Ensembl gene IDs: ENSG00000185664

Ensembl transcript IDs: ENST00000449260.6, ENST00000546543.5, ENST00000547137.5, ENST00000548493.5, ENST00000548689.5, ENST00000548747.6, ENST00000548803.5, ENST00000549233.2, ENST00000549404.5, ENST00000549413.1, ENST00000549418.5, ENST00000549430.5, ENST00000549564.1, ENST00000550447.5, ENST00000550464.5, ENST00000550590.5, ENST00000550762.1, ENST00000552882.5, ENST00000556802.1

Found 493 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCGCCTGCAGGACCACCTaGGCAGTGACTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIACRTT*AVTGPG
Trigger: GCCTGGCCCAGTCACTGCCCAGGTGGTCCTGCAGGC...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAACGCTGGGCAGGGGGCTaGCACCCTGGCGATGAGATC +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKRWAGG*HPGDEI
Trigger: GATCTCATCGCCAGGGTGCCAGCCCCCTGCCCAGCG...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCGGCTGGCACAGCCGCTaGGCAGGGGGCTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVGWHSR*AGGWHP
Trigger: AGGGTGCCAGCCCCCTGCCCAGCGGCTGTGCCAGCC...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACGGCTGGCACAGCCGCTaGGCAGGGGGCTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNGWHSR*AGGWHP
Trigger: AGGGTGCCAGCCCCCTGCCCAGCGGCTGTGCCAGCC...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCAGCCTGCAGGACCACCTaGGCAGTGACTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAACRTT*AVTGPG
Trigger: GCCTGGCCCAGTCACTGCCCAGGTGGTCCTGCAGGC...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCGCCTGCAGGACCACCTaGGCAGTGACTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSACRTT*AVTGPG
Trigger: GCCTGGCCCAGTCACTGCCCAGGTGGTCCTGCAGGC...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATGCCTGCAGGACCACCTaGGCAGTGACTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENACRTT*AVTGPG
Trigger: GCCTGGCCCAGTCACTGCCCAGGTGGTCCTGCAGGC...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAACCATGCAGGCTTCCTTaGGCAGCCCGCCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKPCRLP*AARLGR
Trigger: CCTGCCAAGGCGGGCTGCCCAAGGAAGCCTGCATGG...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCCGCTGGGCAGGGGGCTaGCACCCTGGCGATGAGATC +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSRWAGG*HPGDEI
Trigger: GATCTCATCGCCAGGGTGCCAGCCCCCTGCCCAGCG...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCACGCTGGGCAGGGGGCTaGCACCCTGGCGATGAGATC +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITARWAGG*HPGDEI
Trigger: GATCTCATCGCCAGGGTGCCAGCCCCCTGCCCAGCG...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCTGGGTAGCACAGGCTaGCACAGCCGCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENLGSTG*HSRWAG
Trigger: CCCTGCCCAGCGGCTGTGCCAGCCTGTGCTACCCAG...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCACTGGGTAGCACAGGCTaGCACAGCCGCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITALGSTG*HSRWAG
Trigger: CCCTGCCCAGCGGCTGTGCCAGCCTGTGCTACCCAG...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAACCCTGCCTGTCCCAATaGTCAGCCCAGACACTGGGC +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKPCLSQ*SAQTLG
Trigger: GCCCAGTGTCTGGGCTGAGCATTGGGACAGGCAGGG...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACATGGGGCGGGATCATTTaGGGGGAGGAGCGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITWGGII*GEERWA
Trigger: AGCCCAGCGCTCCTCCCCGCAAATGATCCCGCCCCA...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000548493.5
CDS-3UTR CCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACACCATGCAGGCTTCCTTaGGCAGCCCGCCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITPCRLP*AARLGR
Trigger: CCTGCCAAGGCGGGCTGCCCAAGGAAGCCTGCATGG...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCACCATGCAGGCTTCCTTaGGCAGCCCGCCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAPCRLP*AARLGR
Trigger: CCTGCCAAGGCGGGCTGCCCAAGGAAGCCTGCATGG...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCCGCTGGGCAGGGGGCTaGCACCCTGGCGATGAGATC +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVRWAGG*HPGDEI
Trigger: GATCTCATCGCCAGGGTGCCAGCCCCCTGCCCAGCG...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGGCTGGCACAGCCGCTaGGCAGGGGGCTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSGWHSR*AGGWHP
Trigger: AGGGTGCCAGCCCCCTGCCCAGCGGCTGTGCCAGCC...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACTGGGATAGGCCCCTaGGGCGGGATCATTTGCGGG +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKITGIGP*GGIICG
Trigger: CCCGCAAATGATCCCGCCCCAGGGGCCTATCCCAGT...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000548493.5
CDS-3UTR GCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCACCCTGCCTGTCCCAATaGTCAGCCCAGACACTGGGC +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAPCLSQ*SAQTLG
Trigger: GCCCAGTGTCTGGGCTGAGCATTGGGACAGGCAGGG...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCCCTGCCTGTCCCAATaGTCAGCCCAGACACTGGGC +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENPCLSQ*SAQTLG
Trigger: GCCCAGTGTCTGGGCTGAGCATTGGGACAGGCAGGG...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCTGCCCAGCATTGCCCTaGCTGTCCCAATGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKICPALP*LSQCSA
Trigger: GGCTGAGCATTGGGACAGGCAGGGCAATGCTGGGCA...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAATGCCCAGCATTGCCCTaGCTGTCCCAATGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKCPALP*LSQCSA
Trigger: GGCTGAGCATTGGGACAGGCAGGGCAATGCTGGGCA...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCAGAGGAATGGCAGCCTaGAGGACCACCTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIRGMAA*RTTWAV
Trigger: CACTGCCCAGGTGGTCCTGCAGGCTGCCATTCCTCT...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAAGAGGAATGGCAGCCTaGAGGACCACCTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKRGMAA*RTTWAV
Trigger: CACTGCCCAGGTGGTCCTGCAGGCTGCCATTCCTCT...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCTGTGCCCATCTGTGGTaGCTGGAACTGGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKICAHLW*LELGRS
Trigger: GCTCCTCCCCAGTTCCAGGCACCACAGATGGGCACA...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCGGTGTTAGGGGCCTCTaGAGTTGGCCTGTGCCCATC +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIGVRGL*SWPVPI
Trigger: GATGGGCACAGGCCAACTGCAGAGGCCCCTAACACC...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACCCATGCAGGCTTCCTTaGGCAGCCCGCCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNPCRLP*AARLGR
Trigger: CCTGCCAAGGCGGGCTGCCCAAGGAAGCCTGCATGG...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCCCATGCAGGCTTCCTTaGGCAGCCCGCCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVPCRLP*AARLGR
Trigger: CCTGCCAAGGCGGGCTGCCCAAGGAAGCCTGCATGG...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTGGCTGGCACAGCCGCTaGGCAGGGGGCTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVGWHSR*AGGWHP
Trigger: AGGGTGCCAGCCCCCTGCCCAGCGGCTGTGCCAGCC...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAACAGCCAGAGACACATTaGGGCAGTATGTCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKQPETH*GSMSPS
Trigger: GCTCGGGGACATACTGCCTCAATGTGTCTCTGGCTG...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGGGCCCCCTAGAACTTaGCAGTATTGGCCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITGPPRT*QYWPQV
Trigger: GACCTGGGGCCAATACTGGCAAGTTCTAGGGGGCCC...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCAGGGCCCCCTAGAACTTaGCAGTATTGGCCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAGPPRT*QYWPQV
Trigger: GACCTGGGGCCAATACTGGCAAGTTCTAGGGGGCCC...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCCCCTGCCTGTCCCAATaGTCAGCCCAGACACTGGGC +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVPCLSQ*SAQTLG
Trigger: GCCCAGTGTCTGGGCTGAGCATTGGGACAGGCAGGG...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCATGCCCAGCATTGCCCTaGCTGTCCCAATGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITACPALP*LSQCSA
Trigger: GGCTGAGCATTGGGACAGGCAGGGCAATGCTGGGCA...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATTGCCCAGCATTGCCCTaGCTGTCCCAATGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENCPALP*LSQCSA
Trigger: GGCTGAGCATTGGGACAGGCAGGGCAATGCTGGGCA...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAGTGTGTGCCCAGCATTaGCCTGCCTGTCCCAATGCT +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKVCAQH*PACPNA
Trigger: AGCATTGGGACAGGCAGGGCAATGCTGGGCACACAC...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATAGAGGAATGGCAGCCTaGAGGACCACCTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENRGMAA*RTTWAV
Trigger: CACTGCCCAGGTGGTCCTGCAGGCTGCCATTCCTCT...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCAAGAGGAATGGCAGCCTaGAGGACCACCTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITARGMAA*RTTWAV
Trigger: CACTGCCCAGGTGGTCCTGCAGGCTGCCATTCCTCT...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCTGTGCCCATCTGTGGTaGCTGGAACTGGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSCAHLW*LELGRS
Trigger: GCTCCTCCCCAGTTCCAGGCACCACAGATGGGCACA...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATTGTGCCCATCTGTGGTaGCTGGAACTGGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENCAHLW*LELGRS
Trigger: GCTCCTCCCCAGTTCCAGGCACCACAGATGGGCACA...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCAGGTGTTAGGGGCCTCTaGAGTTGGCCTGTGCCCATC +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAGVRGL*SWPVPI
Trigger: GATGGGCACAGGCCAACTGCAGAGGCCCCTAACACC...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCCGGACGGCACAGCCTaGAGGATCTCGGCACTTTCA +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENPDGTA*RISALS
Trigger: TGAAAGTGCCGAGATCCTGCAGGCTGTGCCGTCCGG...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCACCGGACGGCACAGCCTaGAGGATCTCGGCACTTTCA +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAPDGTA*RISALS
Trigger: TGAAAGTGCCGAGATCCTGCAGGCTGTGCCGTCCGG...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCCACAGTCAGCTCAAATaGATCCCCCTCACCGGACGG +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIHSQLK*IPLTGR
Trigger: CCGTCCGGTGAGGGGGATGCATTTGAGCTGACTGTG...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAACACAGTCAGCTCAAATaGATCCCCCTCACCGGACGG +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKHSQLK*IPLTGR
Trigger: CCGTCCGGTGAGGGGGATGCATTTGAGCTGACTGTG...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAACTGGGTGCTGACCACTaGCAGGCTGTTGGTATCAGC +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKLGADH*QAVGIS
Trigger: GCTGATACCAACAGCCTGGCAGTGGTCAGCACCCAG...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAGACGCAGCCAGTGACTaGTGCTATGTGGCAACTGGG +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKDAASD*CYVATG
Trigger: CCCAGTTGCCACATAGCAGCAGTCACTGGCTGCGTC...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGTACTCAGACCTGCTaGCCACTGAGGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSSTQTC*PLRRGL
Trigger: CAGCCCCCTCCTCAGTGGGCAGCAGGTCTGAGTACT...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAAGTACTCAGACCTGCTaGCCACTGAGGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITSTQTC*PLRRGL
Trigger: CAGCCCCCTCCTCAGTGGGCAGCAGGTCTGAGTACT...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATAGTACTCAGACCTGCTaGCCACTGAGGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENSTQTC*PLRRGL
Trigger: CAGCCCCCTCCTCAGTGGGCAGCAGGTCTGAGTACT...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATGAGAGTACTCAGACCTaGTGCCCACTGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENESTQT*CPLRRG
Trigger: CCCCCTCCTCAGTGGGCAGCAGGTCTGAGTACTCTC...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCAGAGAGTACTCAGACCTaGTGCCCACTGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAESTQT*CPLRRG
Trigger: CCCCCTCCTCAGTGGGCAGCAGGTCTGAGTACTCTC...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGAGAGTACTCAGACCTaGTGCCCACTGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITESTQT*CPLRRG
Trigger: CCCCCTCCTCAGTGGGCAGCAGGTCTGAGTACTCTC...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCCACCTGGGCAGTGACTaGGCCAGGCTCCAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSHLGSD*ARLQVS
Trigger: ACTTACCTGGAGCCTGGCCCAGTCACTGCCCAGGTG...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACACACCTGGGCAGTGACTaGGCCAGGCTCCAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITHLGSD*ARLQVS
Trigger: ACTTACCTGGAGCCTGGCCCAGTCACTGCCCAGGTG...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCACACCTGGGCAGTGACTaGGCCAGGCTCCAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAHLGSD*ARLQVS
Trigger: ACTTACCTGGAGCCTGGCCCAGTCACTGCCCAGGTG...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACCTGGGCAGTGACTaGGCCAGGCTCCAGGTAAGT +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENHLGSD*ARLQVS
Trigger: ACTTACCTGGAGCCTGGCCCAGTCACTGCCCAGGTG...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAGCACCTGCACAGATGTaGTTCCAGAGGGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKAPAQM*FQRALQ
Trigger: CTGCAGAGCCCTCTGGAACCACATCTGTGCAGGTGC...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATTTGGGCAGCCCGCCTTaGCAGGACACAGTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENLGSPP*QDTVSS
Trigger: TGAGCTGACTGTGTCCTGCCAAGGCGGGCTGCCCAA...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACATTGGGCAGCCCGCCTTaGCAGGACACAGTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITLGSPP*QDTVSS
Trigger: TGAGCTGACTGTGTCCTGCCAAGGCGGGCTGCCCAA...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCATTGGGCAGCCCGCCTTaGCAGGACACAGTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITALGSPP*QDTVSS
Trigger: TGAGCTGACTGTGTCCTGCCAAGGCGGGCTGCCCAA...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTCTGGGTAGCACAGGCTaGCACAGCCGCTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSLGSTG*HSRWAG
Trigger: CCCTGCCCAGCGGCTGTGCCAGCCTGTGCTACCCAG...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCAAGCAACCAAAGGCACTaGGGGGACTGGGATAGGCCC +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITASNQRH*GDWDRP
Trigger: GGGCCTATCCCAGTCCCCCCAGTGCCTTTGGTTGCT...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000548493.5
ENST00000552882.5
CDS-3UTR TCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCGGTTCTGAGTTGCCTTaGGACACCAAGCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIGSELP*DTKPVL
Trigger: CAGGACTGGCTTGGTGTCTCAAGGCAACTCAGAACC...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR TCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCTCTGCAGTTGGCGCCTaGCCAGGTGTAGTACCCACA +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSSAVGA*PGVVPT
Trigger: TGTGGGTACTACACCTGGTCAGGCGCCAACTGCAGA...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACATCTGCAGTTGGCGCCTaGCCAGGTGTAGTACCCACA +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITSAVGA*PGVVPT
Trigger: TGTGGGTACTACACCTGGTCAGGCGCCAACTGCAGA...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCAGCCAGAGACACATTaGGGCAGTATGTCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENQPETH*GSMSPS
Trigger: GCTCGGGGACATACTGCCTCAATGTGTCTCTGGCTG...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATTGTCGGGGTATGCTATaGGGCAGAGGCAACGACTCC +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENCRGML*GRGNDS
Trigger: GGAGTCGTTGCCTCTGCCTCATAGCATACCCCGACA...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552882.5
CDS-3UTR GCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCTGCCCAGCATTGCCCTaGCTGTCCCAATGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVCPALP*LSQCSA
Trigger: GGCTGAGCATTGGGACAGGCAGGGCAATGCTGGGCA...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGTGTGTGCCCAGCATTaGCCTGCCTGTCCCAATGCT +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITVCAQH*PACPNA
Trigger: AGCATTGGGACAGGCAGGGCAATGCTGGGCACACAC...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCAGTGTGTGCCCAGCATTaGCCTGCCTGTCCCAATGCT +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAVCAQH*PACPNA
Trigger: AGCATTGGGACAGGCAGGGCAATGCTGGGCACACAC...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCGTGTGTGCCCAGCATTaGCCTGCCTGTCCCAATGCT +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSVCAQH*PACPNA
Trigger: AGCATTGGGACAGGCAGGGCAATGCTGGGCACACAC...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCACTTCCATGGTGTGTGTaGCCAGCATTGCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITALPWCV*PALPCL
Trigger: CAGGCAGGGCAATGCTGGGCACACACACCATGGAAG...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCCTTCCATGGTGTGTGTaGCCAGCATTGCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSLPWCV*PALPCL
Trigger: CAGGCAGGGCAATGCTGGGCACACACACCATGGAAG...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACAGAGGAATGGCAGCCTaGAGGACCACCTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNRGMAA*RTTWAV
Trigger: CACTGCCCAGGTGGTCCTGCAGGCTGCCATTCCTCT...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCTGTGCCCATCTGTGGTaGCTGGAACTGGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVCAHLW*LELGRS
Trigger: GCTCCTCCCCAGTTCCAGGCACCACAGATGGGCACA...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACGGTGTTAGGGGCCTCTaGAGTTGGCCTGTGCCCATC +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNGVRGL*SWPVPI
Trigger: GATGGGCACAGGCCAACTGCAGAGGCCCCTAACACC...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCCCGGACGGCACAGCCTaGAGGATCTCGGCACTTTCA +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVPDGTA*RISALS
Trigger: TGAAAGTGCCGAGATCCTGCAGGCTGTGCCGTCCGG...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGTCAGCTCAAATaGATCCCCCTCACCGGACGG +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENHSQLK*IPLTGR
Trigger: CCGTCCGGTGAGGGGGATGCATTTGAGCTGACTGTG...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCCACAGTCAGCTCAAATaGATCCCCCTCACCGGACGG +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSHSQLK*IPLTGR
Trigger: CCGTCCGGTGAGGGGGATGCATTTGAGCTGACTGTG...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCGATGAGATCTCCATaGAGGCTTCCTTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITAMRSP*RLPWAA
Trigger: GGCTGCCCAAGGAAGCCTGCATGGAGATCTCATCGC...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATGCGATGAGATCTCCATaGAGGCTTCCTTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENAMRSP*RLPWAA
Trigger: GGCTGCCCAAGGAAGCCTGCATGGAGATCTCATCGC...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAACCCTTCAGTATCTGGTaGAGAACCAGCTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKPFSIW*RTSWQA
Trigger: AGCCTGCCAGCTGGTTCTGCACCAGATACTGAAGGG...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCTGGGTGCTGACCACTaGCAGGCTGTTGGTATCAGC +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENLGADH*QAVGIS
Trigger: GCTGATACCAACAGCCTGGCAGTGGTCAGCACCCAG...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAGCAGCCAGTGACTGCTaGTATGTGGCAACTGGGGTA +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKAASDC*YVATGV
Trigger: TACCCCAGTTGCCACATAGCAGCAGTCACTGGCTGC...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATGACGCAGCCAGTGACTaGTGCTATGTGGCAACTGGG +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENDAASD*CYVATG
Trigger: CCCAGTTGCCACATAGCAGCAGTCACTGGCTGCGTC...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGACGCAGCCAGTGACTaGTGCTATGTGGCAACTGGG +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITDAASD*CYVATG
Trigger: CCCAGTTGCCACATAGCAGCAGTCACTGGCTGCGTC...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCGACGCAGCCAGTGACTaGTGCTATGTGGCAACTGGG +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSDAASD*CYVATG
Trigger: CCCAGTTGCCACATAGCAGCAGTCACTGGCTGCGTC...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCGACAAGAGCAGAAGATaGGGGGTAGACGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIDKSRR*GVDAAS
Trigger: ACTGGCTGCGTCTACCCCGCATCTTCTGCTCTTGTC...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAGACAAGAGCAGAAGATaGGGGGTAGACGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKDKSRR*GVDAAS
Trigger: ACTGGCTGCGTCTACCCCGCATCTTCTGCTCTTGTC...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCGAGAGTACTCAGACCTaGTGCCCACTGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVESTQT*CPLRRG
Trigger: CCCCCTCCTCAGTGGGCAGCAGGTCTGAGTACTCTC...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATTTCCTGGGGATACACTaGCTGTCCTCCCCACACCTG +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENFLGIH*LSSPHL
Trigger: CAGGTGTGGGGAGGACAGCCAGTGTATCCCCAGGAA...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCATTCCTGGGGATACACTaGCTGTCCTCCCCACACCTG +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAFLGIH*LSSPHL
Trigger: CAGGTGTGGGGAGGACAGCCAGTGTATCCCCAGGAA...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACATTCCTGGGGATACACTaGCTGTCCTCCCCACACCTG +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITFLGIH*LSSPHL
Trigger: CAGGTGTGGGGAGGACAGCCAGTGTATCCCCAGGAA...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAAGACCAAGAGCCAGATaGGCAAGGTCCACCATCAGG +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKRPRAR*ARSTIR
Trigger: CCTGATGGTGGACCTTGCCCATCTGGCTCTTGGTCT...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCTCCAAGGCCCGCAACTaGGACACGCTCACGGAGAAA +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSSKARN*DTLTEK
Trigger: TTTCTCCGTGAGCGTGTCCCAGTTGCGGGCCTTGGA...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATTCCAAGGCCCGCAACTaGGACACGCTCACGGAGAAA +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENSKARN*DTLTEK
Trigger: TTTCTCCGTGAGCGTGTCCCAGTTGCGGGCCTTGGA...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTGCCTGCAGGACCACCTaGGCAGTGACTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVACRTT*AVTGPG
Trigger: GCCTGGCCCAGTCACTGCCCAGGTGGTCCTGCAGGC...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCGCACCTGCACAGATGTaGTTCCAGAGGGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSAPAQM*FQRALQ
Trigger: CTGCAGAGCCCTCTGGAACCACATCTGTGCAGGTGC...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCTCACCAGCCTTAAGGTaGCTGTACCATCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKISPALR*LYHPAG
Trigger: CCCTGCTGGATGGTACAGCCACCTTAAGGCTGGTGA...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCTTGGGCAGCCCGCCTTaGCAGGACACAGTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVLGSPP*QDTVSS
Trigger: TGAGCTGACTGTGTCCTGCCAAGGCGGGCTGCCCAA...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCCCACCCTTCAGTATCTaGTGCAGAACCAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIPPFSI*CRTSWQ
Trigger: CTGCCAGCTGGTTCTGCACCAGATACTGAAGGGTGG...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACACCAGGCATGATAAGCTaGGTGCTGACCACTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITPGMIS*VLTTAR
Trigger: CCTGGCAGTGGTCAGCACCCAGCTTATCATGCCTGG...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCACCAGGCATGATAAGCTaGGTGCTGACCACTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAPGMIS*VLTTAR
Trigger: CCTGGCAGTGGTCAGCACCCAGCTTATCATGCCTGG...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCCCAGGCATGATAAGCTaGGTGCTGACCACTGCCAGG +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSPGMIS*VLTTAR
Trigger: CCTGGCAGTGGTCAGCACCCAGCTTATCATGCCTGG...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAACCCAAAGCAGGTACTTaGGAAGAGTGTTCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKPKAGT*EECSAA
Trigger: GGCGGCTGAACACTCTTCCCAAGTACCTGCTTTGGG...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552882.5
CDS-3UTR TCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCGGTTCTGAGTTGCCTTaGGACACCAAGCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSGSELP*DTKPVL
Trigger: CAGGACTGGCTTGGTGTCTCAAGGCAACTCAGAACC...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR TCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAACCTTGAGGGACACTTaGCCACCTCTCCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITTLRDT*PPLQQS
Trigger: TGACTGCTGGAGAGGTGGTCAAGTGTCCCTCAAGGT...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR TCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAACCAGGTAAGTATGAGTaGCCACAAGTGCCCGAGAGA +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKPGKYE*PQVPER
Trigger: TCTCTCGGGCACTTGTGGTCACTCATACTTACCTGG...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCTCTGCAGTTGGCGCCTaGCCAGGTGTAGTACCCACA +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVSAVGA*PGVVPT
Trigger: TGTGGGTACTACACCTGGTCAGGCGCCAACTGCAGA...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCTGCAGTTGGCGCCTaGCCAGGTGTAGTACCCACA +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNSAVGA*PGVVPT
Trigger: TGTGGGTACTACACCTGGTCAGGCGCCAACTGCAGA...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAACAGGTGCAGTGCTTATaGCTTCAGTGGTTGGCACCT +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKQVQCL*LQWLAP
Trigger: AGGTGCCAACCACTGAAGTCATAAGCACTGCACCTG...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCCAGGTGCAGTGCTTATaGCTTCAGTGGTTGGCACCT +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIQVQCL*LQWLAP
Trigger: AGGTGCCAACCACTGAAGTCATAAGCACTGCACCTG...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCTGTAGCCTCTGGAGTTaGCATCTCTGCCAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKICSLWS*HLCQCG
Trigger: ACCACACTGGCAGAGATGTCAACTCCAGAGGCTACA...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACCAGCCAGAGACACATTaGGGCAGTATGTCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNQPETH*GSMSPS
Trigger: GCTCGGGGACATACTGCCTCAATGTGTCTCTGGCTG...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACACCAAGGCCTGCTTCTTaGCCAGGCATGATAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITPRPAS*PGMISW
Trigger: CCAGCTTATCATGCCTGGTCAAGAAGCAGGCCTTGG...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCACCAAGGCCTGCTTCTTaGCCAGGCATGATAAGCTGG +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAPRPAS*PGMISW
Trigger: CCAGCTTATCATGCCTGGTCAAGAAGCAGGCCTTGG...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACCTTCCATGGTGTGTGTaGCCAGCATTGCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNLPWCV*PALPCL
Trigger: CAGGCAGGGCAATGCTGGGCACACACACCATGGAAG...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATGAGTGACCACAAGTaGCCGAGAGATCAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKMSDHK*PRDQGS
Trigger: GGAACCCTGATCTCTCGGGCACTTGTGGTCACTCAT...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACCTGGGTGCTGACCACTaGCAGGCTGTTGGTATCAGC +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNLGADH*QAVGIS
Trigger: GCTGATACCAACAGCCTGGCAGTGGTCAGCACCCAG...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCTCAACACCAGCAAGATaGCCACGATCAGCGGAACCT +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKISTPAR*PRSAEP
Trigger: AGGTTCCGCTGATCGTGGGCATCTTGCTGGTGTTGA...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATGCAGCCAGTGACTGCTaGTATGTGGCAACTGGGGTA +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENAASDC*YVATGV
Trigger: TACCCCAGTTGCCACATAGCAGCAGTCACTGGCTGC...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCGCAGCCAGTGACTGCTaGTATGTGGCAACTGGGGTA +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSAASDC*YVATGV
Trigger: TACCCCAGTTGCCACATAGCAGCAGTCACTGGCTGC...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATGACAAGAGCAGAAGATaGGGGGTAGACGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENDKSRR*GVDAAS
Trigger: ACTGGCTGCGTCTACCCCGCATCTTCTGCTCTTGTC...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAAACCTGCCCAAGGCCTaGTTCTTGACCAGGCATGAT +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKNLPKA*FLTRHD
Trigger: ATCATGCCTGGTCAAGAAGCAGGCCTTGGGCAGGTT...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCCAGCAGTCAAGTCTCTaGGCTTCTGTCCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIQQSSL*ASVHSG
Trigger: TCCAGAGTGGACAGAAGCCCAGAGACTTGACTGCTG...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCTGTCCTCCCCACACCTaGCTCCCATTGATGATGGTA +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKICPPHT*LPLMMV
Trigger: TACCATCATCAATGGGAGCCAGGTGTGGGGAGGACA...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTTCCTGGGGATACACTaGCTGTCCTCCCCACACCTG +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNFLGIH*LSSPHL
Trigger: CAGGTGTGGGGAGGACAGCCAGTGTATCCCCAGGAA...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAAGGCCCGCAACTaGGACACGCTCACGGAGAAA +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNSKARN*DTLTEK
Trigger: TTTCTCCGTGAGCGTGTCCCAGTTGCGGGCCTTGGA...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCGCACCTGCACAGATGTaGTTCCAGAGGGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVAPAQM*FQRALQ
Trigger: CTGCAGAGCCCTCTGGAACCACATCTGTGCAGGTGC...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAATGTGCTCTCTGCAGTTaGCATCTGCACAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKCALCS*HLHRCS
Trigger: ACTGCACCTGTGCAGATGCCAACTGCAGAGAGCACA...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCTCACCAGCCTTAAGGTaGCTGTACCATCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSSPALR*LYHPAG
Trigger: CCCTGCTGGATGGTACAGCCACCTTAAGGCTGGTGA...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCCCACCCTTCAGTATCTaGTGCAGAACCAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSPPFSI*CRTSWQ
Trigger: CTGCCAGCTGGTTCTGCACCAGATACTGAAGGGTGG...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCCCACTGCCAGGCTGTTaGTATCAGCCAGAGACACAT +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIPLPGC*YQPETH
Trigger: ATGTGTCTCTGGCTGATACCAACAGCCTGGCAGTGG...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAACCACTGCCAGGCTGTTaGTATCAGCCAGAGACACAT +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKPLPGC*YQPETH
Trigger: ATGTGTCTCTGGCTGATACCAACAGCCTGGCAGTGG...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCACAGGCATGATAAGCTaGGTGCTGACCACTGCCAGG +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSTGMIS*VLTTAR
Trigger: CCTGGCAGTGGTCAGCACCCAGCTTATCATGCCTGT...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449260.6
CDS-3UTR CCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAGTGACTGCTGCTATGTaGCAACTGGGGTACGGAGAA +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKVTAAM*QLGYGE
Trigger: TTCTCCGTACCCCAGTTGCCACATAGCAGCAGTCAC...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACCCAGGCATGATAAGCTaGGTGCTGACCACTGCCAGG +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNPGMIS*VLTTAR
Trigger: CCTGGCAGTGGTCAGCACCCAGCTTATCATGCCTGG...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCGGTTCTGAGTTGCCTTaGGACACCAAGCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVGSELP*DTKPVL
Trigger: CAGGACTGGCTTGGTGTCTCAAGGCAACTCAGAACC...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR TCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACGGTTCTGAGTTGCCTTaGGACACCAAGCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNGSELP*DTKPVL
Trigger: CAGGACTGGCTTGGTGTCTCAAGGCAACTCAGAACC...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR TCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCTCCAGGCTTTGGTTCTaGGTTGCCTTGAGACACCAA +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKISRLWF*VALRHQ
Trigger: TTGGTGTCTCAAGGCAACTCAGAACCAAAGCCTGGA...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR TCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACACCTTGAGGGACACTTaGCCACCTCTCCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNTLRDT*PPLQQS
Trigger: TGACTGCTGGAGAGGTGGTCAAGTGTCCCTCAAGGT...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR TCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAAAGCTTCTCTTCTaGGACCAAGAGCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKITKLLF*DQEPDG
Trigger: CCCATCTGGCTCTTGGTCTCAGAAGAGAAGCTTTGT...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCACCAGGTAAGTATGAGTaGCCACAAGTGCCCGAGAGA +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAPGKYE*PQVPER
Trigger: TCTCTCGGGCACTTGTGGTCACTCATACTTACCTGG...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCCAGGTAAGTATGAGTaGCCACAAGTGCCCGAGAGA +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENPGKYE*PQVPER
Trigger: TCTCTCGGGCACTTGTGGTCACTCATACTTACCTGG...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACATGTAGCCTCTGGAGTTaGCATCTCTGCCAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITCSLWS*HLCQCG
Trigger: ACCACACTGGCAGAGATGTCAACTCCAGAGGCTACA...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATTGTAGCCTCTGGAGTTaGCATCTCTGCCAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENCSLWS*HLCQCG
Trigger: ACCACACTGGCAGAGATGTCAACTCCAGAGGCTACA...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCTTCCGTAGACATGATTaGGCTGGCATCTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIFRRHD*AGIWTF
Trigger: GAAGGTCCAGATGCCAGCTCAATCATGTCTACGGAA...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAATTCCGTAGACATGATTaGGCTGGCATCTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKFRRHD*AGIWTF
Trigger: GAAGGTCCAGATGCCAGCTCAATCATGTCTACGGAA...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCGGACAATGTCCAGGGTaGCGGAAAAGGAACCATATC +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIGQCPG*RKRNHI
Trigger: GATATGGTTCCTTTTCCGTCACCCTGGACATTGTCC...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCTGCTTCTTGACCTGTaGGAAGAATCCCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENLLLDL*EESQAQ
Trigger: CTGTGCCTGGGATTCTTCTCACAGGTCAAGAAGCAG...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449260.6
CDS-3UTR TCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCCCAAGGCCTGCTTCTTaGCCAGGCATGATAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVPRPAS*PGMISW
Trigger: CCAGCTTATCATGCCTGGTCAAGAAGCAGGCCTTGG...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCCACCATCAGGGAAGATaGAGGCATCGTCAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIHHQGR*RHRQFP
Trigger: AGGAAACTGACGATGCCTGCATCTTCCCTGATGGTG...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGGGCCCCCTAGAACTTaGCAGTATTGGCCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSGPPRT*QYWPQV
Trigger: GACCTGGGGCCAATACTGGCAAGTTCTAGGGGGCCC...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTCCCTGCCTGTCCCAATaGTCAGCCCAGACACTGGGC +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVPCLSQ*SAQTLG
Trigger: GCCCAGTGTCTGGGCTGAGCATTGGGACAGGCAGGG...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATATGAGTGACCACAAGTaGCCGAGAGATCAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENMSDHK*PRDQGS
Trigger: GGAACCCTGATCTCTCGGGCACTTGTGGTCACTCAT...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAATGAGTGACCACAAGTaGCCGAGAGATCAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITMSDHK*PRDQGS
Trigger: GGAACCCTGATCTCTCGGGCACTTGTGGTCACTCAT...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACATCAGTGGTTGGCACCTaGACAGATGTGGTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITSVVGT*TDVVPE
Trigger: CTCTGGAACCACATCTGTGCAGGTGCCAACCACTGA...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAATCTGCAGTTGGCATCTaGACAGGTGCAGTGCTTATG +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKSAVGI*TGAVLM
Trigger: CATAAGCACTGCACCTGTGCAGATGCCAACTGCAGA...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCTCTGCAGTTGGCATCTaGACAGGTGCAGTGCTTATG +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKISAVGI*TGAVLM
Trigger: CATAAGCACTGCACCTGTGCAGATGCCAACTGCAGA...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACCCCTTCAGTATCTGGTaGAGAACCAGCTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNPFSIW*RTSWQA
Trigger: AGCCTGCCAGCTGGTTCTGCACCAGATACTGAAGGG...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCATCAACACCAGCAAGATaGCCACGATCAGCGGAACCT +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITASTPAR*PRSAEP
Trigger: AGGTTCCGCTGATCGTGGGCATCTTGCTGGTGTTGA...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCGCAGCCAGTGACTGCTaGTATGTGGCAACTGGGGTA +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVAASDC*YVATGV
Trigger: TACCCCAGTTGCCACATAGCAGCAGTCACTGGCTGC...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTAGTACTCAGACCTGCTaGCCACTGAGGAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSSTQTC*PLRRGL
Trigger: CAGCCCCCTCCTCAGTGGGCAGCAGGTCTGAGTACT...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCAAACCTGCCCAAGGCCTaGTTCTTGACCAGGCATGAT +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITANLPKA*FLTRHD
Trigger: ATCATGCCTGGTCAAGAAGCAGGCCTTGGGCAGGTT...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATAACCTGCCCAAGGCCTaGTTCTTGACCAGGCATGAT +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENNLPKA*FLTRHD
Trigger: ATCATGCCTGGTCAAGAAGCAGGCCTTGGGCAGGTT...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCAGGCTTCTGTCCACTCTaGATACAGCTGCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAGFCPL*IQLPVP
Trigger: TGGAACAGGCAGCTGTATCCAGAGTGGACAGAAGCC...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCACAGCAGTCAAGTCTCTaGGCTTCTGTCCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAQQSSL*ASVHSG
Trigger: TCCAGAGTGGACAGAAGCCCAGAGACTTGACTGCTG...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCATGTCCTCCCCACACCTaGCTCCCATTGATGATGGTA +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITACPPHT*LPLMMV
Trigger: TACCATCATCAATGGGAGCCAGGTGTGGGGAGGACA...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAGACCAAGAGCCAGATaGGCAAGGTCCACCATCAGG +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVRPRAR*ARSTIR
Trigger: CCTGATGGTGGACCTTGCCCATCTGGCTCTTGGTCT...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCTCTGTAGTAGGCACTTaGCCAGCTGTGGTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSSVVGT*PAVVLG
Trigger: CCCTAACACCACAGCTGGCCAAGTGCCTACTACAGA...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACATGTGCTCTCTGCAGTTaGCATCTGCACAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITCALCS*HLHRCS
Trigger: ACTGCACCTGTGCAGATGCCAACTGCAGAGAGCACA...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCTGTGCTCTCTGCAGTTaGCATCTGCACAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSCALCS*HLHRCS
Trigger: ACTGCACCTGTGCAGATGCCAACTGCAGAGAGCACA...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCACCAGCCTTAAGGTaGCTGTACCATCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNSPALR*LYHPAG
Trigger: CCCTGCTGGATGGTACAGCCACCTTAAGGCTGGTGA...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCGCACTTTCAATACCCTaGACAATGTCCAGGGTGACG +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIALSIP*TMSRVT
Trigger: CGTCACCCTGGACATTGTCCAGGGTATTGAAAGTGC...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACCCACCCTTCAGTATCTaGTGCAGAACCAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNPPFSI*CRTSWQ
Trigger: CTGCCAGCTGGTTCTGCACCAGATACTGAAGGGTGG...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCCCACTGCCAGGCTGTTaGTATCAGCCAGAGACACAT +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSPLPGC*YQPETH
Trigger: ATGTGTCTCTGGCTGATACCAACAGCCTGGCAGTGG...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACACTGCTATGTGGCAACTaGGGTACGGAGAAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITLLCGN*GTEKSC
Trigger: GCAAGACTTCTCCGTACCCCAGTTGCCACATAGCAG...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCACTGCTATGTGGCAACTaGGGTACGGAGAAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITALLCGN*GTEKSC
Trigger: GCAAGACTTCTCCGTACCCCAGTTGCCACATAGCAG...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGTGACTGCTGCTATGTaGCAACTGGGGTACGGAGAA +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITVTAAM*QLGYGE
Trigger: TTCTCCGTACCCCAGTTGCCACATAGCAGCAGTCAC...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCAGTGACTGCTGCTATGTaGCAACTGGGGTACGGAGAA +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAVTAAM*QLGYGE
Trigger: TTCTCCGTACCCCAGTTGCCACATAGCAGCAGTCAC...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCGTGACTGCTGCTATGTaGCAACTGGGGTACGGAGAA +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSVTAAM*QLGYGE
Trigger: TTCTCCGTACCCCAGTTGCCACATAGCAGCAGTCAC...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATTCCAAAGGAGGCTCCTaGGCCAGGTGGAATTTAACC +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENSKGGS*ARWNLT
Trigger: GGTTAAATTCCACCTGGCCCAGGAGCCTCCTTTGGA...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552882.5
CDS-3UTR TCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACATCCAGGCTTTGGTTCTaGGTTGCCTTGAGACACCAA +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITSRLWF*VALRHQ
Trigger: TTGGTGTCTCAAGGCAACTCAGAACCAAAGCCTGGA...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR TCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCTCCAGGCTTTGGTTCTaGGTTGCCTTGAGACACCAA +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSSRLWF*VALRHQ
Trigger: TTGGTGTCTCAAGGCAACTCAGAACCAAAGCCTGGA...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR TCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCACAAAGCTTCTCTTCTaGGACCAAGAGCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSTKLLF*DQEPDG
Trigger: CCCATCTGGCTCTTGGTCTCAGAAGAGAAGCTTTGT...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAAGTAATGGTGAAGGCTaGGCTGGAATGAGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITSNGEG*AGMSKR
Trigger: CCTCTTGCTCATTCCAGCTCAGCCTTCACCATTACT...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTTCTGCAGTTGGCGCCTaGCCAGGTGTAGTACCCACA +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSSAVGA*PGVVPT
Trigger: TGTGGGTACTACACCTGGTCAGGCGCCAACTGCAGA...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCCAGGTGCAGTGCTTATaGCTTCAGTGGTTGGCACCT +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVQVQCL*LQWLAP
Trigger: AGGTGCCAACCACTGAAGTCATAAGCACTGCACCTG...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACCAGGTGCAGTGCTTATaGCTTCAGTGGTTGGCACCT +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNQVQCL*LQWLAP
Trigger: AGGTGCCAACCACTGAAGTCATAAGCACTGCACCTG...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCTGTAGCCTCTGGAGTTaGCATCTCTGCCAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVCSLWS*HLCQCG
Trigger: ACCACACTGGCAGAGATGTCAACTCCAGAGGCTACA...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATTTCCGTAGACATGATTaGGCTGGCATCTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENFRRHD*AGIWTF
Trigger: GAAGGTCCAGATGCCAGCTCAATCATGTCTACGGAA...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCAGGACAATGTCCAGGGTaGCGGAAAAGGAACCATATC +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAGQCPG*RKRNHI
Trigger: GATATGGTTCCTTTTCCGTCACCCTGGACATTGTCC...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTAGGCAACGACTCCTCTaGGGCCCAGGATTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSRQRLL*GPGFLC
Trigger: GCAAAGGAATCCTGGGCCTCAGAGGAGTCGTTGCCT...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552882.5
CDS-3UTR GCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATGCTTTGGTTCTGAGTTaGCTTGAGACACCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENALVLS*LETPSQ
Trigger: CTGGCTTGGTGTCTCAAGGCAACTCAGAACCAAAGC...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR GCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCTTTGGTTCTGAGTTaGCTTGAGACACCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITALVLS*LETPSQ
Trigger: CTGGCTTGGTGTCTCAAGGCAACTCAGAACCAAAGC...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR GCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCCACCATCAGGGAAGATaGAGGCATCGTCAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSHHQGR*RHRQFP
Trigger: AGGAAACTGACGATGCCTGCATCTTCCCTGATGGTG...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCACACCATCAGGGAAGATaGAGGCATCGTCAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAHHQGR*RHRQFP
Trigger: AGGAAACTGACGATGCCTGCATCTTCCCTGATGGTG...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACACACCATCAGGGAAGATaGAGGCATCGTCAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITHHQGR*RHRQFP
Trigger: AGGAAACTGACGATGCCTGCATCTTCCCTGATGGTG...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTGTGTGCCCAGCATTaGCCTGCCTGTCCCAATGCT +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSVCAQH*PACPNA
Trigger: AGCATTGGGACAGGCAGGGCAATGCTGGGCACACAC...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTCTTCCATGGTGTGTGTaGCCAGCATTGCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSLPWCV*PALPCL
Trigger: CAGGCAGGGCAATGCTGGGCACACACACCATGGAAG...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTGTGCCCATCTGTGGTaGCTGGAACTGGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVCAHLW*LELGRS
Trigger: GCTCCTCCCCAGTTCCAGGCACCACAGATGGGCACA...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTGGTGTTAGGGGCCTCTaGAGTTGGCCTGTGCCCATC +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVGVRGL*SWPVPI
Trigger: GATGGGCACAGGCCAACTGCAGAGGCCCCTAACACC...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCTGGCATCTGCACAGGTaGAGTGCTTATGACTTCAGT +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIWHLHR*SAYDFS
Trigger: ACTGAAGTCATAAGCACTGCACCTGTGCAGATGCCA...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTCCGGACGGCACAGCCTaGAGGATCTCGGCACTTTCA +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVPDGTA*RISALS
Trigger: TGAAAGTGCCGAGATCCTGCAGGCTGTGCCGTCCGG...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTCTGGGTGCTGACCACTaGCAGGCTGTTGGTATCAGC +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSLGADH*QAVGIS
Trigger: GCTGATACCAACAGCCTGGCAGTGGTCAGCACCCAG...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCAACACCAGCAAGATaGCCACGATCAGCGGAACCT +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNSTPAR*PRSAEP
Trigger: AGGTTCCGCTGATCGTGGGCATCTTGCTGGTGTTGA...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCTCAACACCAGCAAGATaGCCACGATCAGCGGAACCT +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVSTPAR*PRSAEP
Trigger: AGGTTCCGCTGATCGTGGGCATCTTGCTGGTGTTGA...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTGAGAGTACTCAGACCTaGTGCCCACTGAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVESTQT*CPLRRG
Trigger: CCCCCTCCTCAGTGGGCAGCAGGTCTGAGTACTCTC...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTGTCCTCCCCACACCTaGCTCCCATTGATGATGGTA +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNCPPHT*LPLMMV
Trigger: TACCATCATCAATGGGAGCCAGGTGTGGGGAGGACA...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAAGAACTTGCCAGTATTaGCCCCAGGTCTTCCAGACA +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITRTCQY*PQVFQT
Trigger: TGTCTGGAAGACCTGGGGCCAATACTGGCAAGTTCT...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGAACTTGCCAGTATTaGCCCCAGGTCTTCCAGACA +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSRTCQY*PQVFQT
Trigger: TGTCTGGAAGACCTGGGGCCAATACTGGCAAGTTCT...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTTCCAAGGCCCGCAACTaGGACACGCTCACGGAGAAA +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSSKARN*DTLTEK
Trigger: TTTCTCCGTGAGCGTGTCCCAGTTGCGGGCCTTGGA...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCTGTAGTAGGCACTTaGCCAGCTGTGGTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNSVVGT*PAVVLG
Trigger: CCCTAACACCACAGCTGGCCAAGTGCCTACTACAGA...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAATATGACTTCAGTGGTTaGCACCTGCACAGATGTGGT +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKYDFSG*HLHRCG
Trigger: ACCACATCTGTGCAGGTGCCAACCACTGAAGTCATA...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCTATGACTTCAGTGGTTaGCACCTGCACAGATGTGGT +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIYDFSG*HLHRCG
Trigger: ACCACATCTGTGCAGGTGCCAACCACTGAAGTCATA...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCAGCACTTTCAATACCCTaGACAATGTCCAGGGTGACG +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAALSIP*TMSRVT
Trigger: CGTCACCCTGGACATTGTCCAGGGTATTGAAAGTGC...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACCTGCTATGTGGCAACTaGGGTACGGAGAAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNLLCGN*GTEKSC
Trigger: GCAAGACTTCTCCGTACCCCAGTTGCCACATAGCAG...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATGGCTGTTCTCACCAATaGGACAAGAGCAGAAGATGC +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENGCSHQ*DKSRRC
Trigger: GCATCTTCTGCTCTTGTCCCATTGGTGAGAACAGCC...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCGGCTGTTCTCACCAATaGGACAAGAGCAGAAGATGC +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSGCSHQ*DKSRRC
Trigger: GCATCTTCTGCTCTTGTCCCATTGGTGAGAACAGCC...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCAGGCTGTTCTCACCAATaGGACAAGAGCAGAAGATGC +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAGCSHQ*DKSRRC
Trigger: GCATCTTCTGCTCTTGTCCCATTGGTGAGAACAGCC...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAATCTCCCAGGGAAGACTaGGGGAAATATAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKSPRED*GKYRCF
Trigger: GAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTACCTTGAGGGACACTTaGCCACCTCTCCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSTLRDT*PPLQQS
Trigger: TGACTGCTGGAGAGGTGGTCAAGTGTCCCTCAAGGT...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR TCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCTTCCGTAGACATGATTaGGCTGGCATCTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVFRRHD*AGIWTF
Trigger: GAAGGTCCAGATGCCAGCTCAATCATGTCTACGGAA...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTTCCGTAGACATGATTaGGCTGGCATCTGGACCTTC +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNFRRHD*AGIWTF
Trigger: GAAGGTCCAGATGCCAGCTCAATCATGTCTACGGAA...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTCAGCCAGAGACACATTaGGGCAGTATGTCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVQPETH*GSMSPS
Trigger: GCTCGGGGACATACTGCCTCAATGTGTCTCTGGCTG...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCGCTTTGGTTCTGAGTTaGCTTGAGACACCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVALVLS*LETPSQ
Trigger: CTGGCTTGGTGTCTCAAGGCAACTCAGAACCAAAGC...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR GCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAGAGAAGGAGGCATTTaGACCAATCAGTGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVREGGI*TNQCRP
Trigger: GGGCCTACACTGATTGGTGCAAATGCCTCCTTCTCT...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTCTTCCATGGTGTGTGTaGCCAGCATTGCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVLPWCV*PALPCL
Trigger: CAGGCAGGGCAATGCTGGGCACACACACCATGGAAG...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCTGCAGTTGGCATCTaGACAGGTGCAGTGCTTATG +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNSAVGI*TGAVLM
Trigger: CATAAGCACTGCACCTGTGCAGATGCCAACTGCAGA...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCTGTAGTTGTTACCTGTaGAGCTGTGGTTCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKICSCYL*SCGSRK
Trigger: CTTTCTGGAACCACAGCTGCACAGGTAACAACTACA...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTGCGATGAGATCTCCATaGAGGCTTCCTTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVAMRSP*RLPWAA
Trigger: GGCTGCCCAAGGAAGCCTGCATGGAGATCTCATCGC...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTCCCTTCAGTATCTGGTaGAGAACCAGCTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSPFSIW*RTSWQA
Trigger: AGCCTGCCAGCTGGTTCTGCACCAGATACTGAAGGG...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTCTGGGTGCTGACCACTaGCAGGCTGTTGGTATCAGC +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVLGADH*QAVGIS
Trigger: GCTGATACCAACAGCCTGGCAGTGGTCAGCACCCAG...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCGGTACGGAGAAGTCTTaGTTCATAAGTCTGCGCCTA +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSGTEKS*FISLRL
Trigger: TAGGCGCAGACTTATGAAGCAAGACTTCTCCGTACC...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATGGTACGGAGAAGTCTTaGTTCATAAGTCTGCGCCTA +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENGTEKS*FISLRL
Trigger: TAGGCGCAGACTTATGAAGCAAGACTTCTCCGTACC...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTGACGCAGCCAGTGACTaGTGCTATGTGGCAACTGGG +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVDAASD*CYVATG
Trigger: CCCAGTTGCCACATAGCAGCAGTCACTGGCTGCGTC...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGACAGTGTCGGGGTATaGTATGAGGCAGAGGCAACG +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSDSVGV*YEAEAT
Trigger: CGTTGCCTCTGCCTCATAGCATACCCCGACACTGTC...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552882.5
CDS-3UTR GCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAACAGAAACAGAACCCTaGATCCCAAAACAGAGACAG +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKTETEP*IPKQRQ
Trigger: CTGTCTCTGTTTTGGGATGCAGGGTTCTGTTTCTGT...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552882.5
CDS-3UTR CCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATGATAACCTGCCCATCTaGCAATACCTTTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENDNLPI*QYLLAS
Trigger: GGAAGCCAAAAGGTATTGCCAGATGGGCAGGTTATC...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCGATAACCTGCCCATCTaGCAATACCTTTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSDNLPI*QYLLAS
Trigger: GGAAGCCAAAAGGTATTGCCAGATGGGCAGGTTATC...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTAGACCAAGAGCCAGATaGGCAAGGTCCACCATCAGG +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSRPRAR*ARSTIR
Trigger: CCTGATGGTGGACCTTGCCCATCTGGCTCTTGGTCT...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACAGAACTTGCCAGTATTaGCCCCAGGTCTTCCAGACA +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNRTCQY*PQVFQT
Trigger: TGTCTGGAAGACCTGGGGCCAATACTGGCAAGTTCT...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCCAAGGCCCGCAACTaGGACACGCTCACGGAGAAA +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVSKARN*DTLTEK
Trigger: TTTCTCCGTGAGCGTGTCCCAGTTGCGGGCCTTGGA...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTGCACCTGCACAGATGTaGTTCCAGAGGGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVAPAQM*FQRALQ
Trigger: CTGCAGAGCCCTCTGGAACCACATCTGTGCAGGTGC...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCATATGACTTCAGTGGTTaGCACCTGCACAGATGTGGT +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAYDFSG*HLHRCG
Trigger: ACCACATCTGTGCAGGTGCCAACCACTGAAGTCATA...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCTTACCTGTGCAGCTGTaGTTCCAGAAAGCACCACAA +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSLPVQL*FQKAPQ
Trigger: TTGTGGTGCTTTCTGGAACCACAGCTGCACAGGTAA...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCATTACCTGTGCAGCTGTaGTTCCAGAAAGCACCACAA +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITALPVQL*FQKAPQ
Trigger: TTGTGGTGCTTTCTGGAACCACAGCTGCACAGGTAA...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATTTACCTGTGCAGCTGTaGTTCCAGAAAGCACCACAA +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENLPVQL*FQKAPQ
Trigger: TTGTGGTGCTTTCTGGAACCACAGCTGCACAGGTAA...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTTCACCAGCCTTAAGGTaGCTGTACCATCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSSPALR*LYHPAG
Trigger: CCCTGCTGGATGGTACAGCCACCTTAAGGCTGGTGA...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACGCACTTTCAATACCCTaGACAATGTCCAGGGTGACG +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNALSIP*TMSRVT
Trigger: CGTCACCCTGGACATTGTCCAGGGTATTGAAAGTGC...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATTCTCCCAGGGAAGACTaGGGGAAATATAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENSPRED*GKYRCF
Trigger: GAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAACCTATCACAGCCAAATaGAGAAGGCATCTTTTTAGC +
Preference number: 4 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKPITAK*RRHLFS
Trigger: GCTAAAAAGATGCCTTCTTCATTTGGCTGTGATAGG...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTCCAGGTAAGTATGAGTaGCCACAAGTGCCCGAGAGA +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSPGKYE*PQVPER
Trigger: TCTCTCGGGCACTTGTGGTCACTCATACTTACCTGG...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAAATCACAGCATCATATaGGAGTACTCAGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITNHSII*EYSDLL
Trigger: CAGCAGGTCTGAGTACTCTCATATGATGCTGTGATT...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAATCACAGCATCATATaGGAGTACTCAGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSNHSII*EYSDLL
Trigger: CAGCAGGTCTGAGTACTCTCATATGATGCTGTGATT...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTCCAAGGCCTGCTTCTTaGCCAGGCATGATAAGCTGG +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVPRPAS*PGMISW
Trigger: CCAGCTTATCATGCCTGGTCAAGAAGCAGGCCTTGG...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCATTGACCCAGATAACCTaGCCATCTGGCAATACCTTT +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITALTQIT*PSGNTF
Trigger: AAAGGTATTGCCAGATGGGCAGGTTATCTGGGTCAA...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR GCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTTCAGTGGTTGGCACCTaGACAGATGTGGTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSSVVGT*TDVVPE
Trigger: CTCTGGAACCACATCTGTGCAGGTGCCAACCACTGA...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACATGTAGTTGTTACCTGTaGAGCTGTGGTTCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITCSCYL*SCGSRK
Trigger: CTTTCTGGAACCACAGCTGCACAGGTAACAACTACA...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCTGTAGTTGTTACCTGTaGAGCTGTGGTTCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSCSCYL*SCGSRK
Trigger: CTTTCTGGAACCACAGCTGCACAGGTAACAACTACA...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTCCCTTCAGTATCTGGTaGAGAACCAGCTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVPFSIW*RTSWQA
Trigger: AGCCTGCCAGCTGGTTCTGCACCAGATACTGAAGGG...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTTCAACACCAGCAAGATaGCCACGATCAGCGGAACCT +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSSTPAR*PRSAEP
Trigger: AGGTTCCGCTGATCGTGGGCATCTTGCTGGTGTTGA...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCCCTATATATCAGAGATaGAAGGACCACAGCCATCAA +
Preference number: 4 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIPIYQR*KDHSHQ
Trigger: TTGATGGCTGTGGTCCTTGCATCTCTGATATATAGG...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACGGTACGGAGAAGTCTTaGTTCATAAGTCTGCGCCTA +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNGTEKS*FISLRL
Trigger: TAGGCGCAGACTTATGAAGCAAGACTTCTCCGTACC...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTGACAAGAGCAGAAGATaGGGGGTAGACGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVDKSRR*GVDAAS
Trigger: ACTGGCTGCGTCTACCCCGCATCTTCTGCTCTTGTC...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTGGCCCAGGATTCCTTTaGAACGAGATTCCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVGPGFL*NEIPGF
Trigger: GAAGCCGGGAATCTCGTTGCAAAGGAATCCTGGGCC...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552882.5
CDS-3UTR CCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCACACCAAGCCAGTCCTaGTTTCTGGGTACTTTTGTA +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSTPSQS*FLGTFV
Trigger: TACAAAAGTACCCAGAAACCAGGACTGGCTTGGTGT...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATACACCAAGCCAGTCCTaGTTTCTGGGTACTTTTGTA +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENTPSQS*FLGTFV
Trigger: TACAAAAGTACCCAGAAACCAGGACTGGCTTGGTGT...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGGCTTCTGTCCACTCTaGATACAGCTGCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSGFCPL*IQLPVP
Trigger: TGGAACAGGCAGCTGTATCCAGAGTGGACAGAAGCC...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTCAGCAGTCAAGTCTCTaGGCTTCTGTCCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSQQSSL*ASVHSG
Trigger: TCCAGAGTGGACAGAAGCCCAGAGACTTGACTGCTG...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CCA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCATCTGGCAATACCTTTTaGCTTCCAGGGAAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: GKTGGNIGVSVNSRKITASGNTF*LPGKFK
Trigger: CTTGAACTTCCCTGGAAGCCAAAAGGTATTGCCAGA...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CCA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATTCTGGCAATACCTTTTaGCTTCCAGGGAAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: SPREDWGKYRCFCQLQENSGNTF*LPGKFK
Trigger: CTTGAACTTCCCTGGAAGCCAAAAGGTATTGCCAGA...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACATCTGGCAATACCTTTTaGCTTCCAGGGAAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITSGNTF*LPGKFK
Trigger: CTTGAACTTCCCTGGAAGCCAAAAGGTATTGCCAGA...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCGATAACCTGCCCATCTaGCAATACCTTTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVDNLPI*QYLLAS
Trigger: GGAAGCCAAAAGGTATTGCCAGATGGGCAGGTTATC...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTAGACCAAGAGCCAGATaGGCAAGGTCCACCATCAGG +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVRPRAR*ARSTIR
Trigger: CCTGATGGTGGACCTTGCCCATCTGGCTCTTGGTCT...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTTCTGTAGTAGGCACTTaGCCAGCTGTGGTGTTAGGG +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSSVVGT*PAVVLG
Trigger: CCCTAACACCACAGCTGGCCAAGTGCCTACTACAGA...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTTGTGCTCTCTGCAGTTaGCATCTGCACAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSCALCS*HLHRCS
Trigger: ACTGCACCTGTGCAGATGCCAACTGCAGAGAGCACA...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCTTACCTGTGCAGCTGTaGTTCCAGAAAGCACCACAA +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVLPVQL*FQKAPQ
Trigger: TTGTGGTGCTTTCTGGAACCACAGCTGCACAGGTAA...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCACCAGCCTTAAGGTaGCTGTACCATCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVSPALR*LYHPAG
Trigger: CCCTGCTGGATGGTACAGCCACCTTAAGGCTGGTGA...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTCCACCCTTCAGTATCTaGTGCAGAACCAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVPPFSI*CRTSWQ
Trigger: CTGCCAGCTGGTTCTGCACCAGATACTGAAGGGTGG...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTGACTGCTGCTATGTaGCAACTGGGGTACGGAGAA +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSVTAAM*QLGYGE
Trigger: TTCTCCGTACCCCAGTTGCCACATAGCAGCAGTCAC...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCTCCCAGGGAAGACTaGGGGAAATATAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNSPRED*GKYRCF
Trigger: GAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCTCTCCCAGGGAAGACTaGGGGAAATATAGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVSPRED*GKYRCF
Trigger: GAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGGCTCCTGGGCCAGGTaGAATTTAACCTTAGGTCGA +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSGSWAR*NLTLGR
Trigger: TCGACCTAAGGTTAAATTCCACCTGGCCCAGGAGCC...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552882.5
CDS-3UTR TCA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCCCTATCACAGCCAAATaGAGAAGGCATCTTTTTAGC +
Preference number: 4 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSPITAK*RRHLFS
Trigger: GCTAAAAAGATGCCTTCTTCATTTGGCTGTGATAGG...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTACAAAGCTTCTCTTCTaGGACCAAGAGCCAGATGGG +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSTKLLF*DQEPDG
Trigger: CCCATCTGGCTCTTGGTCTCAGAAGAGAAGCTTTGT...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTAGTAATGGTGAAGGCTaGGCTGGAATGAGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSSNGEG*AGMSKR
Trigger: CCTCTTGCTCATTCCAGCTCAGCCTTCACCATTACT...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGGACAATGTCCAGGGTaGCGGAAAAGGAACCATATC +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSGQCPG*RKRNHI
Trigger: GATATGGTTCCTTTTCCGTCACCCTGGACATTGTCC...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACAATCACAGCATCATATaGGAGTACTCAGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNNHSII*EYSDLL
Trigger: CAGCAGGTCTGAGTACTCTCATATGATGCTGTGATT...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCTTGACCCAGATAACCTaGCCATCTGGCAATACCTTT +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVLTQIT*PSGNTF
Trigger: AAAGGTATTGCCAGATGGGCAGGTTATCTGGGTCAA...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTATGAGTGACCACAAGTaGCCGAGAGATCAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVMSDHK*PRDQGS
Trigger: GGAACCCTGATCTCTCGGGCACTTGTGGTCACTCAT...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCAGTGGTTGGCACCTaGACAGATGTGGTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVSVVGT*TDVVPE
Trigger: CTCTGGAACCACATCTGTGCAGGTGCCAACCACTGA...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCTGTAGTTGTTACCTGTaGAGCTGTGGTTCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVCSCYL*SCGSRK
Trigger: CTTTCTGGAACCACAGCTGCACAGGTAACAACTACA...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTAACCTGCCCAAGGCCTaGTTCTTGACCTGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVNLPKA*FLTCEK
Trigger: CTTCTCACAGGTCAAGAAGCAGGCCTTGGGCAGGTT...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449260.6
CDS-3UTR GCA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACACCTATATATCAGAGATaGAAGGACCACAGCCATCAA +
Preference number: 4 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITPIYQR*KDHSHQ
Trigger: TTGATGGCTGTGGTCCTTGCATCTCTGATATATAGG...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTCAGCAGTCAAGTCTCTaGGCTTCTGTCCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVQQSSL*ASVHSG
Trigger: TCCAGAGTGGACAGAAGCCCAGAGACTTGACTGCTG...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCTCTGGCAATACCTTTTaGCTTCCAGGGAAGTTCAAG +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVSGNTF*LPGKFK
Trigger: CTTGAACTTCCCTGGAAGCCAAAAGGTATTGCCAGA...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTCTGCTATGTGGCAACTaGGGTACGGAGAAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVLLCGN*GTEKSC
Trigger: GCAAGACTTCTCCGTACCCCAGTTGCCACATAGCAG...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCCCTATCACAGCCAAATaGAGAAGGCATCTTTTTAGC +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVPITAK*RRHLFS
Trigger: GCTAAAAAGATGCCTTCTTCATTTGGCTGTGATAGG...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACCCTATCACAGCCAAATaGAGAAGGCATCTTTTTAGC +
Preference number: 4 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNPITAK*RRHLFS
Trigger: GCTAAAAAGATGCCTTCTTCATTTGGCTGTGATAGG...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTAGTAATGGTGAAGGCTaGGCTGGAATGAGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVSNGEG*AGMSKR
Trigger: CCTCTTGCTCATTCCAGCTCAGCCTTCACCATTACT...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTGGACAATGTCCAGGGTaGCGGAAAAGGAACCATATC +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVGQCPG*RKRNHI
Trigger: GATATGGTTCCTTTTCCGTCACCCTGGACATTGTCC...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTAGAGAAGGAGGCATTTaGACCAATCAGTGTAGGCCC +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVREGGI*TNQCRP
Trigger: GGGCCTACACTGATTGGTGCAAATGCCTCCTTCTCT...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR GCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTTGGCATCTGCACAGGTaGAGTGCTTATGACTTCAGT +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSWHLHR*SAYDFS
Trigger: ACTGAAGTCATAAGCACTGCACCTGTGCAGATGCCA...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGCAGTTGGCATCTaGACAGGTGCAGTGCTTATG +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVSAVGI*TGAVLM
Trigger: CATAAGCACTGCACCTGTGCAGATGCCAACTGCAGA...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCCCTATATATCAGAGATaGAAGGACCACAGCCATCAA +
Preference number: 4 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVPIYQR*KDHSHQ
Trigger: TTGATGGCTGTGGTCCTTGCATCTCTGATATATAGG...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTAGAACTTGCCAGTATTaGCCCCAGGTCTTCCAGACA +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVRTCQY*PQVFQT
Trigger: TGTCTGGAAGACCTGGGGCCAATACTGGCAAGTTCT...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTTATGACTTCAGTGGTTaGCACCTGCACAGATGTGGT +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSYDFSG*HLHRCG
Trigger: ACCACATCTGTGCAGGTGCCAACCACTGAAGTCATA...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTGCACTTTCAATACCCTaGACAATGTCCAGGGTGACG +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVALSIP*TMSRVT
Trigger: CGTCACCCTGGACATTGTCCAGGGTATTGAAAGTGC...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTAATCACAGCATCATATaGGAGTACTCAGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSNHSII*EYSDLL
Trigger: CAGCAGGTCTGAGTACTCTCATATGATGCTGTGATT...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTGGCATCTGCACAGGTaGAGTGCTTATGACTTCAGT +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVWHLHR*SAYDFS
Trigger: ACTGAAGTCATAAGCACTGCACCTGTGCAGATGCCA...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTGGTACGGAGAAGTCTTaGTTCATAAGTCTGCGCCTA +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVGTEKS*FISLRL
Trigger: TAGGCGCAGACTTATGAAGCAAGACTTCTCCGTACC...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTTACCTGTGCAGCTGTaGTTCCAGAAAGCACCACAA +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVLPVQL*FQKAPQ
Trigger: TTGTGGTGCTTTCTGGAACCACAGCTGCACAGGTAA...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR TCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTAATCACAGCATCATATaGGAGTACTCAGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVNHSII*EYSDLL
Trigger: CAGCAGGTCTGAGTACTCTCATATGATGCTGTGATT...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTTGACCCAGATAACCTaGCCATCTGGCAATACCTTT +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVLTQIT*PSGNTF
Trigger: AAAGGTATTGCCAGATGGGCAGGTTATCTGGGTCAA...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTGTAGTTGTTACCTGTaGAGCTGTGGTTCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVCSCYL*SCGSRK
Trigger: CTTTCTGGAACCACAGCTGCACAGGTAACAACTACA...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTACACCAAGCCAGTCCTaGTTTCTGGGTACTTTTGTA +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVTPSQS*FLGTFV
Trigger: TACAAAAGTACCCAGAAACCAGGACTGGCTTGGTGT...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR TCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTCCTATCACAGCCAAATaGAGAAGGCATCTTTTTAGC +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVPITAK*RRHLFS
Trigger: GCTAAAAAGATGCCTTCTTCATTTGGCTGTGATAGG...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR GCA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTCCTATATATCAGAGATaGAAGGACCACAGCCATCAA +
Preference number: 4 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVPIYQR*KDHSHQ
Trigger: TTGATGGCTGTGGTCCTTGCATCTCTGATATATAGG...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS CCA 90 bp ACCAGCTGGCAGGCTGGGCTGGGTAGCACAGGCTGGCACAGCCGCTaGGCAGGGGGCTGGCACCCTGGCGATGAGATCTCCATGCAGGCT +
Preference number: 5 (lower is better)
Translates to: TSWQAGLGSTGWHSR*AGGWHPGDEISMQA
Trigger: AGCCTGCATGGAGATCTCATCGCCAGGGTGCCAGCCCCCTGCCCAGCGGCTGTGCCAGCCTGTGCTACCCAGCCCAGCCTGCCAGCTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550447.5
ENST00000550464.5
ENST00000552882.5
CDS GCA 90 bp GGCACTTGGCCAGCTGTGGTGTTAGGGGCCTCTGCAGTTGGCCTGTaGCCATCTGTGGTGCCTGGAACTGGGGAGGAGCCACAGGAGGTG +
Preference number: 5 (lower is better)
Translates to: GTWPAVVLGASAVGL*PSVVPGTGEEPQEV
Trigger: CACCTCCTGTGGCTCCTCCCCAGTTCCAGGCACCACAGATGGGCACAGGCCAACTGCAGAGGCCCCTAACACCACAGCTGGCCAAGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550464.5
ENST00000552882.5
ENST00000556802.1
CDS GCA 90 bp GGCTTCCTTGGGCAGCCCGCCTTGGCAGGACACAGTCAGCTCAAATaGATCCCCCTCACCGGACGGCACAGCCTGCAGGATCTCGGCACT +
Preference number: 5 (lower is better)
Translates to: GFLGQPALAGHSQLK*IPLTGRHSLQDLGT
Trigger: AGTGCCGAGATCCTGCAGGCTGTGCCGTCCGGTGAGGGGGATGCATTTGAGCTGACTGTGTCCTGCCAAGGCGGGCTGCCCAAGGAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550447.5
ENST00000550464.5
ENST00000552882.5
CDS CCA 90 bp CAGTATGTCCCCGAGCCACCCTTCAGTATCTGGTGCAGAACCAGCTaGCAGGCTGGGCTGGGTAGCACAGGCTGGCACAGCCGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: QYVPEPPFSIWCRTS*QAGLGSTGWHSRWA
Trigger: TGCCCAGCGGCTGTGCCAGCCTGTGCTACCCAGCCCAGCCTGCCAGCTGGTTCTGCACCAGATACTGAAGGGTGGCTCGGGGACATACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550447.5
ENST00000550464.5
ENST00000552882.5
CDS CCA 90 bp GGTGTTAGGGGCCTCTGCAGTTGGCCTGTGCCCATCTGTGGTGCCTaGAACTGGGGAGGAGCCACAGGAGGTGAGAGGAATGGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: GVRGLCSWPVPICGA*NWGGATGGERNGSL
Trigger: CAGGCTGCCATTCCTCTCACCTCCTGTGGCTCCTCCCCAGTTCCAGGCACCACAGATGGGCACAGGCCAACTGCAGAGGCCCCTAACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550464.5
ENST00000552882.5
ENST00000556802.1
CDS GCA 90 bp GACACATTGAGGCAGTATGTCCCCGAGCCACCCTTCAGTATCTGGTaGAGAACCAGCTGGCAGGCTGGGCTGGGTAGCACAGGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: DTLRQYVPEPPFSIW*RTSWQAGLGSTGWH
Trigger: GTGCCAGCCTGTGCTACCCAGCCCAGCCTGCCAGCTGGTTCTGCACCAGATACTGAAGGGTGGCTCGGGGACATACTGCCTCAATGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550447.5
ENST00000550464.5
ENST00000552882.5
CDS GCA 90 bp TCACTTCCATGGTGTGTGTGCCCAGCATTGCCCTGCCTGTCCCAATaGTCAGCCCAGACACTGGGCCCCCTAGAACTTGCCAGTATTGGC +
Preference number: 5 (lower is better)
Translates to: SLPWCVCPALPCLSQ*SAQTLGPLELASIG
Trigger: GCCAATACTGGCAAGTTCTAGGGGGCCCAGTGTCTGGGCTGAGCATTGGGACAGGCAGGGCAATGCTGGGCACACACACCATGGAAGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000549404.5
ENST00000550464.5
ENST00000552882.5
ENST00000556802.1
CDS GCA 90 bp AACTTCTGTAGTAGGCACTTGGCCAGCTGTGGTGTTAGGGGCCTCTaGAGTTGGCCTGTGCCCATCTGTGGTGCCTGGAACTGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: NFCSRHLASCGVRGL*SWPVPICGAWNWGG
Trigger: TCCTCCCCAGTTCCAGGCACCACAGATGGGCACAGGCCAACTGCAGAGGCCCCTAACACCACAGCTGGCCAAGTGCCTACTACAGAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550464.5
ENST00000552882.5
ENST00000556802.1
CDS CCA 90 bp GGGCAAGGTCCACCATCAGGGAAGATGCAGGCATCGTCAGTTTCCTaGGGATACACTGGCTGTCCTCCCCACACCTGGCTCCCATTGATG +
Preference number: 5 (lower is better)
Translates to: GQGPPSGKMQASSVS*GYTGCPPHTWLPLM
Trigger: CATCAATGGGAGCCAGGTGTGGGGAGGACAGCCAGTGTATCCCCAGGAAACTGACGATGCCTGCATCTTCCCTGATGGTGGACCTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000449260.6
ENST00000547137.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000548803.5
ENST00000549418.5
ENST00000549430.5
ENST00000550447.5
ENST00000550590.5
ENST00000552882.5
CDS CCA 90 bp GGGCAAGGTCCACCATCAGGGAAGATGCAGGCATCGTCAGTTTCCTaGGGATACACTGGCTGTCCTCCCCACACCTGGCTCCCTGAAAGA +
Preference number: 5 (lower is better)
Translates to: GQGPPSGKMQASSVS*GYTGCPPHTWLPER
Trigger: TCTTTCAGGGAGCCAGGTGTGGGGAGGACAGCCAGTGTATCCCCAGGAAACTGACGATGCCTGCATCTTCCCTGATGGTGGACCTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556802.1
CDS GCA 90 bp TCTGAGACCAAGAGCCAGATGGGCAAGGTCCACCATCAGGGAAGATaGAGGCATCGTCAGTTTCCTGGGGATACACTGGCTGTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: SETKSQMGKVHHQGR*RHRQFPGDTLAVLP
Trigger: GGGGAGGACAGCCAGTGTATCCCCAGGAAACTGACGATGCCTGCATCTTCCCTGATGGTGGACCTTGCCCATCTGGCTCTTGGTCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000548803.5
ENST00000549404.5
ENST00000549418.5
ENST00000549430.5
ENST00000550447.5
ENST00000550464.5
ENST00000550590.5
ENST00000552882.5
ENST00000556802.1
CDS GCA 90 bp GACACAGTCAGCTCAAATGCATCCCCCTCACCGGACGGCACAGCCTaGAGGATCTCGGCACTTTCAATACCCTGGACAATGTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: DTVSSNASPSPDGTA*RISALSIPWTMSRV
Trigger: CACCCTGGACATTGTCCAGGGTATTGAAAGTGCCGAGATCCTGCAGGCTGTGCCGTCCGGTGAGGGGGATGCATTTGAGCTGACTGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550464.5
ENST00000552882.5
CDS GCA 90 bp GACACAGTCAGCTCAAATGCATCCCCCTCACCGGACGGCACAGCCTaGAGGATCTCGGCACTTTCAATACCCTCCCAGGTCTTCCAGACA +
Preference number: 5 (lower is better)
Translates to: DTVSSNASPSPDGTA*RISALSIPSQVFQT
Trigger: TGTCTGGAAGACCTGGGAGGGTATTGAAAGTGCCGAGATCCTGCAGGCTGTGCCGTCCGGTGAGGGGGATGCATTTGAGCTGACTGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550447.5
CDS GCA 90 bp AACTTCTGTAGTAGGCACTTGGCCAGCTGTGGTGTTAGGGGCCTCTaGAGTTGGCCTGTGCCCATCTGTGGTGCCTGGAACCCAGGTCTT +
Preference number: 5 (lower is better)
Translates to: NFCSRHLASCGVRGL*SWPVPICGAWNPGL
Trigger: AAGACCTGGGTTCCAGGCACCACAGATGGGCACAGGCCAACTGCAGAGGCCCCTAACACCACAGCTGGCCAAGTGCCTACTACAGAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548803.5
CDS-3UTR CAA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCCTGGGGCGGGATCATTaGCGGGGAGGAGCGCTGGGC +
Preference number: 5 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKILGRDH*RGGALG
Trigger: GCCCAGCGCTCCTCCCCGCAAATGATCCCGCCCCAG...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000548493.5
CDS TCA 90 bp AGCAAGATGCCCACGATCAGCGGAACCTGCCCAAGGCCTGCTTCTTaGCCTGTGAGAAGAATCCCAGGCACAGGCATGATAAGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: SKMPTISGTCPRPAS*PVRRIPGTGMISWV
Trigger: CACCCAGCTTATCATGCCTGTGCCTGGGATTCTTCTCACAGGTCAAGAAGCAGGCCTTGGGCAGGTTCCGCTGATCGTGGGCATCTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449260.6
ENST00000549564.1
CDS TCA 90 bp GAGACAGTGTCGGGGTATGCTATGAGGCAGAGGCAACGACTCCTCTaGGGCCCAGGATTCCTTTGCAACGAGATTCCCGGCTTCCTGGTT +
Preference number: 5 (lower is better)
Translates to: ETVSGYAMRQRQRLL*GPGFLCNEIPGFLV
Trigger: AACCAGGAAGCCGGGAATCTCGTTGCAAAGGAATCCTGGGCCTCAGAGGAGTCGTTGCCTCTGCCTCATAGCATACCCCGACACTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552882.5
CDS TCA 90 bp CTCTGGATACAGCTGCCTGTTCCAGGCTTTGGTTCTGAGTTGCCTTaGGACACCAAGCCAGTCCTGGTTTCTGGGTACTGGGGCGGGATC +
Preference number: 5 (lower is better)
Translates to: LWIQLPVPGFGSELP*DTKPVLVSGYWGGI
Trigger: GATCCCGCCCCAGTACCCAGAAACCAGGACTGGCTTGGTGTCTCAAGGCAACTCAGAACCAAAGCCTGGAACAGGCAGCTGTATCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548689.5
ENST00000549430.5
CDS GCA 90 bp GGCAGTGACTGGGCCAGGCTCCAGGTAAGTATGAGTGACCACAAGTaGCCGAGAGATCAGGGTTCCACTACTGTCTCCAAAGTCCCAGGT +
Preference number: 5 (lower is better)
Translates to: GSDWARLQVSMSDHK*PRDQGSTTVSKVPG
Trigger: ACCTGGGACTTTGGAGACAGTAGTGGAACCCTGATCTCTCGGGCACTTGTGGTCACTCATACTTACCTGGAGCCTGGCCCAGTCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550464.5
ENST00000552882.5
ENST00000556802.1
CDS GCA 90 bp GTCCACTCTGGATACAGCTGCCTGTTCCAGGCTTTGGTTCTGAGTTaGCTTGAGACACCAAGCCAGTCCTGGTTTCTGGGTACTGGGGCG +
Preference number: 5 (lower is better)
Translates to: VHSGYSCLFQALVLS*LETPSQSWFLGTGA
Trigger: CGCCCCAGTACCCAGAAACCAGGACTGGCTTGGTGTCTCAAGGCAACTCAGAACCAAAGCCTGGAACAGGCAGCTGTATCCAGAGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548689.5
ENST00000549430.5
CDS GCA 90 bp CAACACCAGCAAGATGCCCACGATCAGCGGAACCTGCCCAAGGCCTaGTTCTTGACCTGTGAGAAGAATCCCAGGCACAGGCATGATAAG +
Preference number: 5 (lower is better)
Translates to: QHQQDAHDQRNLPKA*FLTCEKNPRHRHDK
Trigger: CTTATCATGCCTGTGCCTGGGATTCTTCTCACAGGTCAAGAAGCAGGCCTTGGGCAGGTTCCGCTGATCGTGGGCATCTTGCTGGTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449260.6
ENST00000549564.1
CDS-3UTR CAA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCCTTGGGCAGCCCGCCTaGGCAGGACACAGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKILGQPA*AGHSQL
Trigger: GAGCTGACTGTGTCCTGCCAAGGCGGGCTGCCCAAG...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCTCCATGCAGGCTTCCTaGGGCAGCCCGCCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKISMQAS*GSPPWQ
Trigger: CTGCCAAGGCGGGCTGCCCAAGGAAGCCTGCATGGA...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS TCA 90 bp ACAGAACCCTGCATCCCAAAACAGAGACAGTGTCGGGGTATGCTATaGGGCAGAGGCAACGACTCCTCTGAGGCCCAGGATTCCTTTGCA +
Preference number: 5 (lower is better)
Translates to: TEPCIPKQRQCRGML*GRGNDSSEAQDSFA
Trigger: TGCAAAGGAATCCTGGGCCTCAGAGGAGTCGTTGCCTCTGCCTCATAGCATACCCCGACACTGTCTCTGTTTTGGGATGCAGGGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552882.5
CDS GCA 90 bp CTCCAGCAGTCAAGTCTCTGGGCTTCTGTCCACTCTGGATACAGCTaGCTGTTCCAGGCTTTGGTTCTGAGTTGCCTTGAGACACCAAGC +
Preference number: 5 (lower is better)
Translates to: LQQSSLWASVHSGYS*LFQALVLSCLETPS
Trigger: GCTTGGTGTCTCAAGGCAACTCAGAACCAAAGCCTGGAACAGGCAGCTGTATCCAGAGTGGACAGAAGCCCAGAGACTTGACTGCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000548803.5
ENST00000549233.2
ENST00000549413.1
ENST00000549418.5
ENST00000549430.5
ENST00000550590.5
ENST00000552882.5
CDS-3UTR CAA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATTCCATGCAGGCTTCCTaGGGCAGCCCGCCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: SPREDWGKYRCFCQLQENSMQAS*GSPPWQ
Trigger: CTGCCAAGGCGGGCTGCCCAAGGAAGCCTGCATGGA...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCTCCATGCAGGCTTCCTaGGGCAGCCCGCCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSSMQAS*GSPPWQ
Trigger: CTGCCAAGGCGGGCTGCCCAAGGAAGCCTGCATGGA...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS TCA 90 bp CTCTGGATACAGCTGCCTGTTCCAGGCTTTGGTTCTGAGTTGCCTTaGGACACCAAGCCAGTCCTGGTTTCTGGGTACTTTTGTAGCCCC +
Preference number: 5 (lower is better)
Translates to: LWIQLPVPGFGSELP*DTKPVLVSGYFCSP
Trigger: GGGGCTACAAAAGTACCCAGAAACCAGGACTGGCTTGGTGTCTCAAGGCAACTCAGAACCAAAGCCTGGAACAGGCAGCTGTATCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548747.6
ENST00000548803.5
ENST00000549413.1
ENST00000549418.5
ENST00000550590.5
ENST00000552882.5
CDS TCA 90 bp CTTCTGTCCACTCTGGATACAGCTGCCTGTTCCAGGCTTTGGTTCTaGGTTGCCTTGAGACACCAAGCCAGTCCTGGTTTCTGGGTACTG +
Preference number: 5 (lower is better)
Translates to: LLSTLDTAACSRLWF*VALRHQASPGFWVL
Trigger: CAGTACCCAGAAACCAGGACTGGCTTGGTGTCTCAAGGCAACTCAGAACCAAAGCCTGGAACAGGCAGCTGTATCCAGAGTGGACAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548689.5
ENST00000549430.5
CDS GCA 90 bp GAGAAGAATCCCAGGCACAGGCATGATAAGCTGGGTGCTGACCACTaGCAGGCTGTTGGTATCAGCCAGAGACACATTGAGGCAGTATGT +
Preference number: 5 (lower is better)
Translates to: EKNPRHRHDKLGADH*QAVGISQRHIEAVC
Trigger: ACATACTGCCTCAATGTGTCTCTGGCTGATACCAACAGCCTGGCAGTGGTCAGCACCCAGCTTATCATGCCTGTGCCTGGGATTCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449260.6
ENST00000549404.5
ENST00000549564.1
CDS GCA 90 bp TATATATCAGAGATGCAAGGACCACAGCCATCAACACCAGCAAGATaGCCACGATCAGCGGAACCTGCCCAAGGCCTGCTTCTTGACCTG +
Preference number: 5 (lower is better)
Translates to: YISEMQGPQPSTPAR*PRSAEPAQGLLLDL
Trigger: CAGGTCAAGAAGCAGGCCTTGGGCAGGTTCCGCTGATCGTGGGCATCTTGCTGGTGTTGATGGCTGTGGTCCTTGCATCTCTGATATATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449260.6
ENST00000549564.1
CDS GCA 90 bp AAGGCCTGCTTCTTGACCAGGCATGATAAGCTGGGTGCTGACCACTaGCAGGCTGTTGGTATCAGCCAGAGACACATTGAGGCAGTATGT +
Preference number: 5 (lower is better)
Translates to: KACFLTRHDKLGADH*QAVGISQRHIEAVC
Trigger: ACATACTGCCTCAATGTGTCTCTGGCTGATACCAACAGCCTGGCAGTGGTCAGCACCCAGCTTATCATGCCTGGTCAAGAAGCAGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000548493.5
ENST00000548747.6
ENST00000550447.5
ENST00000550464.5
ENST00000552882.5
CDS GCA 90 bp TATATATCAGAGATGCAAGGACCACAGCCATCAACACCAGCAAGATaGCCACGATCAGCGGAACCTGCCCAAGGCCTGCTTCTTGACCAG +
Preference number: 5 (lower is better)
Translates to: YISEMQGPQPSTPAR*PRSAEPAQGLLLDQ
Trigger: CTGGTCAAGAAGCAGGCCTTGGGCAGGTTCCGCTGATCGTGGGCATCTTGCTGGTGTTGATGGCTGTGGTCCTTGCATCTCTGATATATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000548493.5
ENST00000548747.6
ENST00000550447.5
ENST00000550464.5
ENST00000552882.5
CDS GCA 90 bp GGTCTCCACCCACTCTGTAGTTGTTACCTGTGCAGCTGTGCTCTCTaGAGTTGGCATCTGCACAGGTGCAGTGCTTATGACTTCAGTGGT +
Preference number: 5 (lower is better)
Translates to: GLHPLCSCYLCSCAL*SWHLHRCSAYDFSG
Trigger: ACCACTGAAGTCATAAGCACTGCACCTGTGCAGATGCCAACTGCAGAGAGCACAGCTGCACAGGTAACAACTACAGAGTGGGTGGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548803.5
ENST00000549404.5
CDS CCA 90 bp ACCATCAGGGAAGATGCAGGCATCGTCAGTTTCCTGGGGATACACTaGCTGTCCTCCCCACACCTGGCTCCCATTGATGATGGTATTGTT +
Preference number: 5 (lower is better)
Translates to: TIREDAGIVSFLGIH*LSSPHLAPIDDGIV
Trigger: AACAATACCATCATCAATGGGAGCCAGGTGTGGGGAGGACAGCCAGTGTATCCCCAGGAAACTGACGATGCCTGCATCTTCCCTGATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000449260.6
ENST00000547137.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000548803.5
ENST00000549418.5
ENST00000549430.5
ENST00000550447.5
ENST00000550590.5
ENST00000552882.5
CDS-3UTR CAA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCCTTGGGCAGCCCGCCTaGGCAGGACACAGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVLGQPA*AGHSQL
Trigger: GAGCTGACTGTGTCCTGCCAAGGCGGGCTGCCCAAG...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS TCA 90 bp CTTCTGTCCACTCTGGATACAGCTGCCTGTTCCAGGCTTTGGTTCTaGGTTGCCTTGAGACACCAAGCCAGTCCTGGTTTCTGGGTACTT +
Preference number: 5 (lower is better)
Translates to: LLSTLDTAACSRLWF*VALRHQASPGFWVL
Trigger: AAGTACCCAGAAACCAGGACTGGCTTGGTGTCTCAAGGCAACTCAGAACCAAAGCCTGGAACAGGCAGCTGTATCCAGAGTGGACAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548747.6
ENST00000548803.5
ENST00000549233.2
ENST00000549413.1
ENST00000549418.5
ENST00000550590.5
ENST00000552882.5
CDS-3UTR CAA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAACTGTGCTCTCTGCAGTaGGCATCTGCACAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKLCSLQ*ASAQVQ
Trigger: CTGCACCTGTGCAGATGCCAACTGCAGAGAGCACAG...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCCTGTGCTCTCTGCAGTaGGCATCTGCACAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKILCSLQ*ASAQVQ
Trigger: CTGCACCTGTGCAGATGCCAACTGCAGAGAGCACAG...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS TCA 90 bp CTCTGGATACAGCTGCCTGTTCCAGGCTTTGGTTCTGAGTTGCCTTaGGACACCAAGCCAGTCCTGGTTTCTGGGTACTTTTACTGTCTG +
Preference number: 5 (lower is better)
Translates to: LWIQLPVPGFGSELP*DTKPVLVSGYFYCL
Trigger: CAGACAGTAAAAGTACCCAGAAACCAGGACTGGCTTGGTGTCTCAAGGCAACTCAGAACCAAAGCCTGGAACAGGCAGCTGTATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549233.2
CDS GCA 90 bp GTCCACTCTGGATACAGCTGCCTGTTCCAGGCTTTGGTTCTGAGTTaGCTTGAGACACCAAGCCAGTCCTGGTTTCTGGGTACTTTTGTA +
Preference number: 5 (lower is better)
Translates to: VHSGYSCLFQALVLS*LETPSQSWFLGTFV
Trigger: TACAAAAGTACCCAGAAACCAGGACTGGCTTGGTGTCTCAAGGCAACTCAGAACCAAAGCCTGGAACAGGCAGCTGTATCCAGAGTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548747.6
ENST00000548803.5
ENST00000549413.1
ENST00000549418.5
ENST00000550590.5
ENST00000552882.5
CDS GCA 90 bp GTCCACTCTGGATACAGCTGCCTGTTCCAGGCTTTGGTTCTGAGTTaGCTTGAGACACCAAGCCAGTCCTGGTTTCTGGGTACTTTTACT +
Preference number: 5 (lower is better)
Translates to: VHSGYSCLFQALVLS*LETPSQSWFLGTFT
Trigger: AGTAAAAGTACCCAGAAACCAGGACTGGCTTGGTGTCTCAAGGCAACTCAGAACCAAAGCCTGGAACAGGCAGCTGTATCCAGAGTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549233.2
CDS CCA 90 bp GAGATTCCCGGCTTCCTGGTTTCCAAAGGAGGCTCCTGGGCCAGGTaGAATTTAACCTTAGGTCGATACATATTTTCCCCAGGATTGGTG +
Preference number: 5 (lower is better)
Translates to: EIPGFLVSKGGSWAR*NLTLGRYIFSPGLV
Trigger: CACCAATCCTGGGGAAAATATGTATCGACCTAAGGTTAAATTCCACCTGGCCCAGGAGCCTCCTTTGGAAACCAGGAAGCCGGGAATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552882.5
CDS-3UTR CAA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGACCTTGAGGGACACTaGACCACCTCTCCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITDLEGH*TTSPAV
Trigger: GACTGCTGGAGAGGTGGTCAAGTGTCCCTCAAGGTC...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CAA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTGTGTGTGCCCAGCATaGCCCTGCCTGTCCCAATGC +
Preference number: 5 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNCVCPA*PCLSQC
Trigger: GCATTGGGACAGGCAGGGCAATGCTGGGCACACACA...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCTGTGTGTGCCCAGCATaGCCCTGCCTGTCCCAATGC +
Preference number: 5 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVCVCPA*PCLSQC
Trigger: GCATTGGGACAGGCAGGGCAATGCTGGGCACACACA...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCACTGTGCTCTCTGCAGTaGGCATCTGCACAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: GKTGGNIGVSVNSRKITALCSLQ*ASAQVQ
Trigger: CTGCACCTGTGCAGATGCCAACTGCAGAGAGCACAG...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCCTGTGCTCTCTGCAGTaGGCATCTGCACAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSLCSLQ*ASAQVQ
Trigger: CTGCACCTGTGCAGATGCCAACTGCAGAGAGCACAG...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTCTTGGGCAGCCCGCCTaGGCAGGACACAGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSLGQPA*AGHSQL
Trigger: GAGCTGACTGTGTCCTGCCAAGGCGGGCTGCCCAAG...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTTCCATGCAGGCTTCCTaGGGCAGCCCGCCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSSMQAS*GSPPWQ
Trigger: CTGCCAAGGCGGGCTGCCCAAGGAAGCCTGCATGGA...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS GCA 90 bp CACACCTGGCTCCCATTGATGATGGTATTGTTGACCCAGATAACCTaGCCATCTGGCAATACCTTTTGGCTTCCAGGGAAGTTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: HTWLPLMMVLLTQIT*PSGNTFWLPGKFKA
Trigger: TGCCTTGAACTTCCCTGGAAGCCAAAAGGTATTGCCAGATGGGCAGGTTATCTGGGTCAACAATACCATCATCAATGGGAGCCAGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000449260.6
ENST00000547137.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000548803.5
ENST00000549233.2
ENST00000549418.5
ENST00000549430.5
ENST00000550447.5
ENST00000550590.5
ENST00000552882.5
CDS CCA 90 bp CTTTGCAACGAGATTCCCGGCTTCCTGGTTTCCAAAGGAGGCTCCTaGGCCAGGTGGAATTTAACCTTAGGTCGATACATATTTTCCCCA +
Preference number: 5 (lower is better)
Translates to: LCNEIPGFLVSKGGS*ARWNLTLGRYIFSP
Trigger: TGGGGAAAATATGTATCGACCTAAGGTTAAATTCCACCTGGCCCAGGAGCCTCCTTTGGAAACCAGGAAGCCGGGAATCTCGTTGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552882.5
CDS-3UTR CAA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCTTTCTCAGGAAGTGCTaGTTCCCTCCATCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIFLRKC*FPPSKA
Trigger: GGCCTTGGATGGAGGGAACAAGCACTTCCTGAGAAA...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCTTCTGTAGTAGGCACTaGGCCAGCTGTGGTGTTAGG +
Preference number: 5 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIFCSRH*ASCGVR
Trigger: CCTAACACCACAGCTGGCCAAGTGCCTACTACAGAA...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCCCCAAGGCCTGCTTCTaGACCTGTGAGAAGAATCCC +
Preference number: 5 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSPKACF*TCEKNP
Trigger: GGGATTCTTCTCACAGGTCAAGAAGCAGGCCTTGGG...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000449260.6
CDS-3UTR CAA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAGGGTACGGAGAAGTCTaGCTTCATAAGTCTGCGCCT +
Preference number: 5 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKGYGEV*LHKSAP
Trigger: AGGCGCAGACTTATGAAGCAAGACTTCTCCGTACCC...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCCCAAGGCCTGCTTCTaGACCAGGCATGATAAGCTG +
Preference number: 5 (lower is better)
Translates to: SPREDWGKYRCFCQLQENPKACF*TRHDKL
Trigger: CAGCTTATCATGCCTGGTCAAGAAGCAGGCCTTGGG...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp GGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACAGCACCCAAGGCCTGCTTCTaGACCAGGCATGATAAGCTG +
Preference number: 5 (lower is better)
Translates to: GKTGGNIGVSVNSRKITAPKACF*TRHDKL
Trigger: CAGCTTATCATGCCTGGTCAAGAAGCAGGCCTTGGG...TGCTGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS GCA 90 bp CTTTTGGCTTCCAGGGAAGTTCAAGGCAATAGAGAAGGAGGCATTTaGACCAATCAGTGTAGGCCCATCATTACTGACCTTGAGGGACAC +
Preference number: 5 (lower is better)
Translates to: LLASREVQGNREGGI*TNQCRPIITDLEGH
Trigger: GTGTCCCTCAAGGTCAGTAATGATGGGCCTACACTGATTGGTGCAAATGCCTCCTTCTCTATTGCCTTGAACTTCCCTGGAAGCCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000449260.6
ENST00000547137.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000548803.5
ENST00000549233.2
ENST00000549413.1
ENST00000549418.5
ENST00000549430.5
ENST00000550447.5
ENST00000550590.5
ENST00000552882.5
CDS-3UTR CAA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATTGCCTGTTCCAGGCTTaGGTTCTGAGTTGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: SPREDWGKYRCFCQLQENCLFQA*VLSCLE
Trigger: CTCAAGGCAACTCAGAACCAAAGCCTGGAACAGGCA...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CAA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCCACACCTGGCTCCCATaGATGATGGTATTGTTGACC +
Preference number: 5 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIHTWLP*MMVLLT
Trigger: GGTCAACAATACCATCATCAATGGGAGCCAGGTGTG...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CAA 90 bp AGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAACACACCTGGCTCCCATaGATGATGGTATTGTTGACC +
Preference number: 5 (lower is better)
Translates to: SLPGKTGGNIGVSVNSRKHTWLP*MMVLLT
Trigger: GGTCAACAATACCATCATCAATGGGAGCCAGGTGTG...TTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CAA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTTGTGTGTGCCCAGCATaGCCCTGCCTGTCCCAATGC +
Preference number: 5 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSCVCPA*PCLSQC
Trigger: GCATTGGGACAGGCAGGGCAATGCTGGGCACACACA...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATTTTCTCAGGAAGTGCTaGTTCCCTCCATCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: SPREDWGKYRCFCQLQENFLRKC*FPPSKA
Trigger: GGCCTTGGATGGAGGGAACAAGCACTTCCTGAGAAA...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATTTCTGTAGTAGGCACTaGGCCAGCTGTGGTGTTAGG +
Preference number: 5 (lower is better)
Translates to: SPREDWGKYRCFCQLQENFCSRH*ASCGVR
Trigger: CCTAACACCACAGCTGGCCAAGTGCCTACTACAGAA...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCAGCCAGAGACACATaGAGGCAGTATGTCCCCGAG +
Preference number: 5 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNSARDT*RQYVPE
Trigger: CTCGGGGACATACTGCCTCAATGTGTCTCTGGCTGA...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCTCAGCCAGAGACACATaGAGGCAGTATGTCCCCGAG +
Preference number: 5 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVSARDT*RQYVPE
Trigger: CTCGGGGACATACTGCCTCAATGTGTCTCTGGCTGA...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATGGGTACGGAGAAGTCTaGCTTCATAAGTCTGCGCCT +
Preference number: 5 (lower is better)
Translates to: SPREDWGKYRCFCQLQENGYGEV*LHKSAP
Trigger: AGGCGCAGACTTATGAAGCAAGACTTCTCCGTACCC...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTGCCTGTTCCAGGCTTaGGTTCTGAGTTGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNCLFQA*VLSCLE
Trigger: CTCAAGGCAACTCAGAACCAAAGCCTGGAACAGGCA...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CAA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGACCTTGAGGGACACTaGACCACCTCTCCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSDLEGH*TTSPAV
Trigger: GACTGCTGGAGAGGTGGTCAAGTGTCCCTCAAGGTC...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CAA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACACCTGGCTCCCATaGATGATGGTATTGTTGACC +
Preference number: 5 (lower is better)
Translates to: SPREDWGKYRCFCQLQENHTWLP*MMVLLT
Trigger: GGTCAACAATACCATCATCAATGGGAGCCAGGTGTG...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CAA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCTTCTGTAGTAGGCACTaGGCCAGCTGTGGTGTTAGG +
Preference number: 5 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVFCSRH*ASCGVR
Trigger: CCTAACACCACAGCTGGCCAAGTGCCTACTACAGAA...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCCAGAAAGCACCACAATaGATACCTCTGCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIQKAPQ*IPLQVS
Trigger: TGACACCTGCAGAGGTATCAATTGTGGTGCTTTCTG...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS GCA 90 bp GAGAAGTACTCACCATTGATGATGGTATTGTTGACCCAGATAACCTaGCCATCTGGCAATACCTTTTGGCTTCCAGGGAAGTTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: EKYSPLMMVLLTQIT*PSGNTFWLPGKFKA
Trigger: TGCCTTGAACTTCCCTGGAAGCCAAAAGGTATTGCCAGATGGGCAGGTTATCTGGGTCAACAATACCATCATCAATGGTGAGTACTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549413.1
CDS CCA 90 bp ATGGTATTGTTGACCCAGATAACCTGCCCATCTGGCAATACCTTTTaGCTTCCAGGGAAGTTCAAGGCAATAGAGAAGGAGGCATTTGCA +
Preference number: 5 (lower is better)
Translates to: MVLLTQITCPSGNTF*LPGKFKAIEKEAFA
Trigger: TGCAAATGCCTCCTTCTCTATTGCCTTGAACTTCCCTGGAAGCCAAAAGGTATTGCCAGATGGGCAGGTTATCTGGGTCAACAATACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000449260.6
ENST00000547137.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000548803.5
ENST00000549233.2
ENST00000549413.1
ENST00000549418.5
ENST00000549430.5
ENST00000550447.5
ENST00000550590.5
ENST00000552882.5
CDS CCA 90 bp GCTCCCATTGATGATGGTATTGTTGACCCAGATAACCTGCCCATCTaGCAATACCTTTTGGCTTCCAGGGAAGTTCAAGGCAATAGAGAA +
Preference number: 5 (lower is better)
Translates to: APIDDGIVDPDNLPI*QYLLASREVQGNRE
Trigger: TTCTCTATTGCCTTGAACTTCCCTGGAAGCCAAAAGGTATTGCCAGATGGGCAGGTTATCTGGGTCAACAATACCATCATCAATGGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000449260.6
ENST00000547137.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000548803.5
ENST00000549233.2
ENST00000549418.5
ENST00000549430.5
ENST00000550447.5
ENST00000550590.5
ENST00000552882.5
CDS-3UTR CAA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCTTGATGATGGTATTGTaGACCCAGATAACCTGCCCA +
Preference number: 5 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKILMMVL*TQITCP
Trigger: TGGGCAGGTTATCTGGGTCAACAATACCATCATCAA...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CAA 90 bp CTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCCCATTGATGATGGTATaGTTGACCCAGATAACCTGC +
Preference number: 5 (lower is better)
Translates to: LPGKTGGNIGVSVNSRKIPLMMV*LTQITC
Trigger: GCAGGTTATCTGGGTCAACAATACCATCATCAATGG...GATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CAA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTCTGTGCTCTCTGCAGTaGGCATCTGCACAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVLCSLQ*ASAQVQ
Trigger: CTGCACCTGTGCAGATGCCAACTGCAGAGAGCACAG...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACACAGAAAGCACCACAATaGATACCTCTGCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITQKAPQ*IPLQVS
Trigger: TGACACCTGCAGAGGTATCAATTGTGGTGCTTTCTG...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCCAGAAAGCACCACAATaGATACCTCTGCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSQKAPQ*IPLQVS
Trigger: TGACACCTGCAGAGGTATCAATTGTGGTGCTTTCTG...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTAGGCCCAGGATTCCTTaGCAACGAGATTCCCGGCTT +
Preference number: 5 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSRPRIP*QRDSRL
Trigger: AAGCCGGGAATCTCGTTGCAAAGGAATCCTGGGCCT...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552882.5
CDS CCA 90 bp CTCACCATTGATGATGGTATTGTTGACCCAGATAACCTGCCCATCTaGCAATACCTTTTGGCTTCCAGGGAAGTTCAAGGCAATAGAGAA +
Preference number: 5 (lower is better)
Translates to: LTIDDGIVDPDNLPI*QYLLASREVQGNRE
Trigger: TTCTCTATTGCCTTGAACTTCCCTGGAAGCCAAAAGGTATTGCCAGATGGGCAGGTTATCTGGGTCAACAATACCATCATCAATGGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549413.1
CDS-3UTR CAA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTTGCCTGTTCCAGGCTTaGGTTCTGAGTTGCCTTGAG +
Preference number: 5 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSCLFQA*VLSCLE
Trigger: CTCAAGGCAACTCAGAACCAAAGCCTGGAACAGGCA...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CAA 90 bp AATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCATCTGGCAATACCTTTaGGCTTCCAGGGAAGTTCAA +
Preference number: 5 (lower is better)
Translates to: NSSLPGKTGGNIGVSVNSIWQYL*ASREVQ
Trigger: TTGAACTTCCCTGGAAGCCAAAAGGTATTGCCAGAT...GGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CAA 90 bp CCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATCACATTGATGATGGTATTGTaGACCCAGATAACCTGCCCA +
Preference number: 5 (lower is better)
Translates to: PGKTGGNIGVSVNSRKITLMMVL*TQITCP
Trigger: TGGGCAGGTTATCTGGGTCAACAATACCATCATCAA...TGTGATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CAA 90 bp TCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACTCCAGGAAAATTTGATGATGGTATTGTaGACCCAGATAACCTGCCCA +
Preference number: 5 (lower is better)
Translates to: SPREDWGKYRCFCQLQENLMMVL*TQITCP
Trigger: TGGGCAGGTTATCTGGGTCAACAATACCATCATCAA...ATTTTCCTGGAGTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CAA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTTTTCTCAGGAAGTGCTaGTTCCCTCCATCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSFLRKC*FPPSKA
Trigger: GGCCTTGGATGGAGGGAACAAGCACTTCCTGAGAAA...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCAGCCAGAGACACATaGAGGCAGTATGTCCCCGAG +
Preference number: 5 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVSARDT*RQYVPE
Trigger: CTCGGGGACATACTGCCTCAATGTGTCTCTGGCTGA...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGGGTACGGAGAAGTCTaGCTTCATAAGTCTGCGCCT +
Preference number: 5 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSGYGEV*LHKSAP
Trigger: AGGCGCAGACTTATGAAGCAAGACTTCTCCGTACCC...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTCCCAAGGCCTGCTTCTaGACCAGGCATGATAAGCTG +
Preference number: 5 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVPKACF*TRHDKL
Trigger: CAGCTTATCATGCCTGGTCAAGAAGCAGGCCTTGGG...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCATCTGGCAATACCTTTaGGCTTCCAGGGAAGTTCAA +
Preference number: 5 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVIWQYL*ASREVQ
Trigger: TTGAACTTCCCTGGAAGCCAAAAGGTATTGCCAGAT...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CAA 90 bp GTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCAACATCTGGCAATACCTTTaGGCTTCCAGGGAAGTTCAA +
Preference number: 5 (lower is better)
Translates to: VNSSLPGKTGGNIGVSVNIWQYL*ASREVQ
Trigger: TTGAACTTCCCTGGAAGCCAAAAGGTATTGCCAGAT...GTTGACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CAA 90 bp TCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTGTCCCATTGATGATGGTATaGTTGACCCAGATAACCTGC +
Preference number: 5 (lower is better)
Translates to: SVNSSLPGKTGGNIGVSVPLMMV*LTQITC
Trigger: GCAGGTTATCTGGGTCAACAATACCATCATCAATGG...GACAGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS-3UTR CAA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTTCTGTAGTAGGCACTaGGCCAGCTGTGGTGTTAGG +
Preference number: 5 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVFCSRH*ASCGVR
Trigger: CCTAACACCACAGCTGGCCAAGTGCCTACTACAGAA...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp TTTATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTGGGTACGGAGAAGTCTaGCTTCATAAGTCTGCGCCT +
Preference number: 5 (lower is better)
Translates to: FISVNSSLPGKTGGNIGVGYGEV*LHKSAP
Trigger: AGGCGCAGACTTATGAAGCAAGACTTCTCCGTACCC...AACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTCAGAAAGCACCACAATaGATACCTCTGCAGGTGTCA +
Preference number: 5 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSQKAPQ*IPLQVS
Trigger: TGACACCTGCAGAGGTATCAATTGTGGTGCTTTCTG...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS-3UTR CAA 90 bp ATTTCAGTTAATAGTAGTCTCCCAGGGAAGACTGGGGGAAATATAGGTGTTTCTATCTGGCAATACCTTTaGGCTTCCAGGGAAGTTCAA +
Preference number: 5 (lower is better)
Translates to: ISVNSSLPGKTGGNIGVSIWQYL*ASREVQ
Trigger: TTGAACTTCCCTGGAAGCCAAAAGGTATTGCCAGAT...AGAAACACCTATATTTCCCCCAGTCTTCCCTGGGAGACTACTATTAACTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000552882.5
CDS CCA 90 bp TTTTTCAGGTTGAACCAGAGTTACTGGATTCTGGAGTCACAGGCTTaGAATCAGATAAGACCTGGGAAACCTTATTCTATAGATAAGGAA +
Preference number: 5 (lower is better)
Translates to: FFRLNQSYWILESQA*NQIRPGKPYSIDKE
Trigger: TTCCTTATCTATAGAATAAGGTTTCCCAGGTCTTATCTGATTCCAAGCCTGTGACTCCAGAATCCAGTAACTCTGGTTCAACCTGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550762.1
CDS GCA 72 bp GGGCAGGGGGCTGGCACCCTGGCGATGAGATCTCCATaGAGGCTTCCTTGGGCAGCCCGCCTTGGCAGGACA +
Preference number: 6 (lower is better)
Translates to: GQGAGTLAMRSP*RLPWAARLGRT
Trigger: TGTCCTGCCAAGGCGGGCTGCCCAAGGAAGCCTGCATGGAGATCTCATCGCCAGGGTGCCAGCCCCCTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550447.5
ENST00000550464.5
ENST00000552882.5
CDS GCA 72 bp GGGCAGCCCGCCTTGGCAGGACACAGTCAGCTCAAATaGATCCCCCTCACCGGACGGCACAGCCTGCAGGAT +
Preference number: 6 (lower is better)
Translates to: GQPALAGHSQLK*IPLTGRHSLQD
Trigger: ATCCTGCAGGCTGTGCCGTCCGGTGAGGGGGATGCATTTGAGCTGACTGTGTCCTGCCAAGGCGGGCTGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550447.5
ENST00000550464.5
ENST00000552882.5
CDS CAA 90 bp CCCGGCGATGGTAGACAGTCACTTCCATGGTGTGTGTGCCCAGCATaGCCCTGCCTGTCCCAATGCTCAGCCCAGACACTGGGCCCCCTA +
Preference number: 6 (lower is better)
Translates to: PGDGRQSLPWCVCPA*PCLSQCSAQTLGPL
Trigger: TAGGGGGCCCAGTGTCTGGGCTGAGCATTGGGACAGGCAGGGCAATGCTGGGCACACACACCATGGAAGTGACTGTCTACCATCGCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000549404.5
ENST00000550464.5
ENST00000552882.5
ENST00000556802.1
CDS GCA 72 bp TGGTGTGTGTGCCCAGCATTGCCCTGCCTGTCCCAATaGTCAGCCCAGACACTGGGCCCCCTAGAACTTGCC +
Preference number: 6 (lower is better)
Translates to: WCVCPALPCLSQ*SAQTLGPLELA
Trigger: GGCAAGTTCTAGGGGGCCCAGTGTCTGGGCTGAGCATTGGGACAGGCAGGGCAATGCTGGGCACACACACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000549404.5
ENST00000550464.5
ENST00000552882.5
ENST00000556802.1
CDS GCA 72 bp CCAGCTGTGGTGTTAGGGGCCTCTGCAGTTGGCCTGTaGCCATCTGTGGTGCCTGGAACCCAGGTCTTCCAG +
Preference number: 6 (lower is better)
Translates to: PAVVLGASAVGL*PSVVPGTQVFQ
Trigger: CTGGAAGACCTGGGTTCCAGGCACCACAGATGGGCACAGGCCAACTGCAGAGGCCCCTAACACCACAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548803.5
CDS GCA 72 bp CCCGGCGATGGTAGACAGTCACTTCCATGGTGTGTGTaGCCAGCATTGCCCTGCCTGTCCCAATGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: PGDGRQSLPWCV*PALPCLSQCSA
Trigger: GGCTGAGCATTGGGACAGGCAGGGCAATGCTGGGCACACACACCATGGAAGTGACTGTCTACCATCGCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000549404.5
ENST00000550464.5
ENST00000552882.5
ENST00000556802.1
CDS GCA 72 bp AGTAGGCACTTGGCCAGCTGTGGTGTTAGGGGCCTCTaGAGTTGGCCTGTGCCCATCTGTGGTGCCTGGAAC +
Preference number: 6 (lower is better)
Translates to: SRHLASCGVRGL*SWPVPICGAWN
Trigger: GTTCCAGGCACCACAGATGGGCACAGGCCAACTGCAGAGGCCCCTAACACCACAGCTGGCCAAGTGCCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548747.6
ENST00000548803.5
ENST00000549404.5
ENST00000550464.5
ENST00000552882.5
ENST00000556802.1
CDS GCA 72 bp AGGCAGTATGTCCCCGAGCCACCCTTCAGTATCTGGTaGAGAACCAGCTGGCAGGCTGGGCTGGGTAGCACA +
Preference number: 6 (lower is better)
Translates to: RQYVPEPPFSIW*RTSWQAGLGST
Trigger: TGTGCTACCCAGCCCAGCCTGCCAGCTGGTTCTGCACCAGATACTGAAGGGTGGCTCGGGGACATACTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550447.5
ENST00000550464.5
ENST00000552882.5
CDS CCA 72 bp GGTGGCTGTACCATCCAGCAGGGGGCCCAGGGAACCTaGCAGGAGAGGATCAAGGAGGCAAGATCAAGAGAC +
Preference number: 6 (lower is better)
Translates to: GGCTIQQGAQGT*QERIKEARSRD
Trigger: GTCTCTTGATCTTGCCTCCTTGATCCTCTCCTGCCAGGTTCCCTGGGCCCCCTGCTGGATGGTACAGCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550762.1
CDS CCA 72 bp AGGAAGTGCTTGTTCCCTCCATCCAAGGCCCGCAACTaGGACACGCTCACGGAGAAAGGCACCTGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: RKCLFPPSKARN*DTLTEKGTWSQ
Trigger: CTGGGACCAGGTGCCTTTCTCCGTGAGCGTGTCCCAGTTGCGGGCCTTGGATGGAGGGAACAAGCACTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547137.5
CDS GCA 72 bp AGCTCAAATGCATCCCCCTCACCGGACGGCACAGCCTaGAGGATCTCGGCACTTTCAATACCCTCCCAGGTC +
Preference number: 6 (lower is better)
Translates to: SSNASPSPDGTA*RISALSIPSQV
Trigger: GACCTGGGAGGGTATTGAAAGTGCCGAGATCCTGCAGGCTGTGCCGTCCGGTGAGGGGGATGCATTTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550447.5
CDS CCA 72 bp AGGAATGGCAGCCTGCAGGACCACCTGGGCAGTGACTaGGCCAGGCTCCAGGTAAGTATGAGTGACCACAAG +
Preference number: 6 (lower is better)
Translates to: RNGSLQDHLGSD*ARLQVSMSDHK
Trigger: CTTGTGGTCACTCATACTTACCTGGAGCCTGGCCCAGTCACTGCCCAGGTGGTCCTGCAGGCTGCCATTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550464.5
ENST00000552882.5
ENST00000556802.1
CDS CCA 72 bp AATCCAGGGGGACTTGTCTCTTCACCAGCCTTAAGGTaGCTGTACCATCCAGCAGGGGGCCCAGGGAACCTG +
Preference number: 6 (lower is better)
Translates to: NPGGLVSSPALR*LYHPAGGPGNL
Trigger: CAGGTTCCCTGGGCCCCCTGCTGGATGGTACAGCCACCTTAAGGCTGGTGAAGAGACAAGTCCCCCTGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000548803.5
ENST00000549404.5
ENST00000550464.5
ENST00000550762.1
ENST00000552882.5
CDS TCA 72 bp CCACTGCCAGGCTGTTGGTATCAGCCAGAGACACATTaGGGCAGTATGTCCCCGAGCCACCCTGTAGCCTCT +
Preference number: 6 (lower is better)
Translates to: PLPGCWYQPETH*GSMSPSHPVAS
Trigger: AGAGGCTACAGGGTGGCTCGGGGACATACTGCCTCAATGTGTCTCTGGCTGATACCAACAGCCTGGCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549564.1
CDS GCA 72 bp GTAGACAGTCACTTCCATGGTGTGTGTGCCCAGCATTaGCCTGCCTGTCCCAATGCTCAGCCCAGACACTGG +
Preference number: 6 (lower is better)
Translates to: VDSHFHGVCAQH*PACPNAQPRHW
Trigger: CCAGTGTCTGGGCTGAGCATTGGGACAGGCAGGGCAATGCTGGGCACACACACCATGGAAGTGACTGTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000549404.5
ENST00000550464.5
ENST00000552882.5
ENST00000556802.1
CDS GCA 72 bp CAAGATGCCCACGATCAGCGGAACCTGCCCAAGGCCTaGTTCTTGACCTGTGAGAAGAATCCCAGGCACAGG +
Preference number: 6 (lower is better)
Translates to: QDAHDQRNLPKA*FLTCEKNPRHR
Trigger: CCTGTGCCTGGGATTCTTCTCACAGGTCAAGAAGCAGGCCTTGGGCAGGTTCCGCTGATCGTGGGCATCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449260.6
ENST00000549564.1
CDS GCA 72 bp GAGATGCAAGGACCACAGCCATCAACACCAGCAAGATaGCCACGATCAGCGGAACCTGCCCAAGGCCTGCTT +
Preference number: 6 (lower is better)
Translates to: EMQGPQPSTPAR*PRSAEPAQGLL
Trigger: AAGCAGGCCTTGGGCAGGTTCCGCTGATCGTGGGCATCTTGCTGGTGTTGATGGCTGTGGTCCTTGCATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000549564.1
ENST00000550447.5
ENST00000550464.5
ENST00000552882.5
CDS GCA 72 bp GGGGGCTGTTCTCACCAATGGGACAAGAGCAGAAGATaGGGGGTAGACGCAGCCAGTGACTGCTGCTATGTG +
Preference number: 6 (lower is better)
Translates to: GGCSHQWDKSRR*GVDAASDCCYV
Trigger: CACATAGCAGCAGTCACTGGCTGCGTCTACCCCGCATCTTCTGCTCTTGTCCCATTGGTGAGAACAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550447.5
ENST00000550464.5
ENST00000552882.5
CDS CCA 72 bp AGGAAGTGCTTGTTCCCTCCATCCAAGGCCCGCAACTaGGACACGCTCACGGAGAAAGGCACCTGGTCAGTA +
Preference number: 6 (lower is better)
Translates to: RKCLFPPSKARN*DTLTEKGTWSV
Trigger: TACTGACCAGGTGCCTTTCTCCGTGAGCGTGTCCCAGTTGCGGGCCTTGGATGGAGGGAACAAGCACTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550464.5
ENST00000552882.5
ENST00000556802.1
CDS CCA 72 bp AGGTGTAGGAGAGGTCAGCTTCAGCCAGATAGCCACTaGGGTCATGGAGCTGGAGGGCAAAGGTCAGAGGCT +
Preference number: 6 (lower is better)
Translates to: RCRRGQLQPDSH*GHGAGGQRSEA
Trigger: AGCCTCTGACCTTTGCCCTCCAGCTCCATGACCCCAGTGGCTATCTGGCTGAAGCTGACCTCTCCTACACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550464.5
ENST00000552882.5
ENST00000556802.1
CDS CAA 72 bp GGTAGACAGTCACTTCCATGGTGTGTGTGCCCAGCATaGCCCTGCCTGTCCCAATGCTCAGCCCAGACACTG +
Preference number: 6 (lower is better)
Translates to: GRQSLPWCVCPA*PCLSQCSAQTL
Trigger: CAGTGTCTGGGCTGAGCATTGGGACAGGCAGGGCAATGCTGGGCACACACACCATGGAAGTGACTGTCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000549404.5
ENST00000550464.5
ENST00000552882.5
ENST00000556802.1
CDS CAA 72 bp GCCCACGATCAGCGGAACCTGCCCAAGGCCTGCTTCTaGACCTGTGAGAAGAATCCCAGGCACAGGCATGAT +
Preference number: 6 (lower is better)
Translates to: AHDQRNLPKACF*TCEKNPRHRHD
Trigger: ATCATGCCTGTGCCTGGGATTCTTCTCACAGGTCAAGAAGCAGGCCTTGGGCAGGTTCCGCTGATCGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449260.6
ENST00000549564.1
CDS CAA 72 bp ACCACTGCCAGGCTGTTGGTATCAGCCAGAGACACATaGAGGCAGTATGTCCCCGAGCCACCCTGTAGCCTC +
Preference number: 6 (lower is better)
Translates to: TTARLLVSARDT*RQYVPEPPCSL
Trigger: GAGGCTACAGGGTGGCTCGGGGACATACTGCCTCAATGTGTCTCTGGCTGATACCAACAGCCTGGCAGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549564.1
CDS CAA 90 bp TGGGTGCTGACCACTGCCAGGCTGTTGGTATCAGCCAGAGACACATaGAGGCAGTATGTCCCCGAGCCACCCTTCAGTATCTGGTGCAGA +
Preference number: 6 (lower is better)
Translates to: WVLTTARLLVSARDT*RQYVPEPPFSIWCR
Trigger: TCTGCACCAGATACTGAAGGGTGGCTCGGGGACATACTGCCTCAATGTGTCTCTGGCTGATACCAACAGCCTGGCAGTGGTCAGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550447.5
ENST00000550464.5
ENST00000552882.5
CDS CAA 90 bp CAGCAAGATGCCCACGATCAGCGGAACCTGCCCAAGGCCTGCTTCTaGACCTGTGAGAAGAATCCCAGGCACAGGCATGATAAGCTGGGT +
Preference number: 6 (lower is better)
Translates to: QQDAHDQRNLPKACF*TCEKNPRHRHDKLG
Trigger: ACCCAGCTTATCATGCCTGTGCCTGGGATTCTTCTCACAGGTCAAGAAGCAGGCCTTGGGCAGGTTCCGCTGATCGTGGGCATCTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449260.6
ENST00000549564.1
CDS GCA 72 bp AGCTCAAATGCATCCCCCTCACCGGACGGCACAGCCTaGAGGATCTCGGCACTTTCAATACCCTGGACAATG +
Preference number: 6 (lower is better)
Translates to: SSNASPSPDGTA*RISALSIPWTM
Trigger: CATTGTCCAGGGTATTGAAAGTGCCGAGATCCTGCAGGCTGTGCCGTCCGGTGAGGGGGATGCATTTGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550464.5
ENST00000550762.1
ENST00000552882.5
CDS GCA 72 bp CCCAGGCACAGGCATGATAAGCTGGGTGCTGACCACTaGCAGGCTGTTGGTATCAGCCAGAGACACATTGAG +
Preference number: 6 (lower is better)
Translates to: PRHRHDKLGADH*QAVGISQRHIE
Trigger: CTCAATGTGTCTCTGGCTGATACCAACAGCCTGGCAGTGGTCAGCACCCAGCTTATCATGCCTGTGCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449260.6
ENST00000549404.5
ENST00000549564.1
CDS GCA 72 bp AGCAGAAGATGCGGGGTAGACGCAGCCAGTGACTGCTaGTATGTGGCAACTGGGGTACGGAGAAGTCTTGCT +
Preference number: 6 (lower is better)
Translates to: SRRCGVDAASDC*YVATGVRRSLA
Trigger: AGCAAGACTTCTCCGTACCCCAGTTGCCACATAGCAGCAGTCACTGGCTGCGTCTACCCCGCATCTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550447.5
ENST00000550464.5
ENST00000552882.5
CDS CCA 72 bp CCTGTGAGAAGAATCCCAGGCACAGGCATGATAAGCTaGGTGCTGACCACTGCCAGGCTGTTGGTATCAGCC +
Preference number: 6 (lower is better)
Translates to: PVRRIPGTGMIS*VLTTARLLVSA
Trigger: GGCTGATACCAACAGCCTGGCAGTGGTCAGCACCCAGCTTATCATGCCTGTGCCTGGGATTCTTCTCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000449260.6
ENST00000549404.5
ENST00000549564.1
CDS CAA 72 bp GCAGAGGCAACGACTCCTCTGAGGCCCAGGATTCCTTaGCAACGAGATTCCCGGCTTCCTGGTTTCCAAAGG +
Preference number: 6 (lower is better)
Translates to: AEATTPLRPRIP*QRDSRLPGFQR
Trigger: CCTTTGGAAACCAGGAAGCCGGGAATCTCGTTGCAAAGGAATCCTGGGCCTCAGAGGAGTCGTTGCCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552882.5
CDS TCA 72 bp CTGGGGTCATGGAGCTGGAGGGCAAAGGTCAGAGGCTaGTTTCTCAGGAAGTGCTTGTTCCCTCCATCCAAG +
Preference number: 6 (lower is better)
Translates to: LGSWSWRAKVRG*FLRKCLFPPSK
Trigger: CTTGGATGGAGGGAACAAGCACTTCCTGAGAAATCAGCCTCTGACCTTTGCCCTCCAGCTCCATGACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550464.5
ENST00000552882.5
ENST00000556802.1
CDS TCA 72 bp ACAGATGTGGTTCCAGAGGGCTCTGCAGTTGGCGCCTaGCCAGGTGTAGTACCCACAACTTCTGTAGTAGGC +
Preference number: 6 (lower is better)
Translates to: TDVVPEGSAVGA*PGVVPTTSVVG
Trigger: GCCTACTACAGAAGTTGTGGGTACTACACCTGGTCAGGCGCCAACTGCAGAGCCCTCTGGAACCACATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000449260.6
ENST00000547137.5
ENST00000548493.5
ENST00000548747.6
ENST00000548803.5
ENST00000549404.5
ENST00000549564.1
ENST00000550464.5
ENST00000552882.5
CDS TCA 72 bp CCACTGCCAGGCTGTTGGTATCAGCCAGAGACACATTaGGGCAGTATGTCCCCGAGCCACCCTTCAGTATCT +
Preference number: 6 (lower is better)
Translates to: PLPGCWYQPETH*GSMSPSHPSVS
Trigger: AGATACTGAAGGGTGGCTCGGGGACATACTGCCTCAATGTGTCTCTGGCTGATACCAACAGCCTGGCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550447.5
ENST00000550464.5
ENST00000552882.5
CDS TCA 72 bp TGCATCCCAAAACAGAGACAGTGTCGGGGTATGCTATaGGGCAGAGGCAACGACTCCTCTGAGGCCCAGGAT +
Preference number: 6 (lower is better)
Translates to: CIPKQRQCRGML*GRGNDSSEAQD
Trigger: ATCCTGGGCCTCAGAGGAGTCGTTGCCTCTGCCTCATAGCATACCCCGACACTGTCTCTGTTTTGGGATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552882.5
CDS GCA 72 bp AAGAGCCAGATGGGCAAGGTCCACCATCAGGGAAGATaGAGGCATCGTCAGTTTCCTGGGGATACACTGGCT +
Preference number: 6 (lower is better)
Translates to: KSQMGKVHHQGR*RHRQFPGDTLA
Trigger: AGCCAGTGTATCCCCAGGAAACTGACGATGCCTGCATCTTCCCTGATGGTGGACCTTGCCCATCTGGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000548803.5
ENST00000549404.5
ENST00000549418.5
ENST00000549430.5
ENST00000550447.5
ENST00000550464.5
ENST00000550590.5
ENST00000552882.5
ENST00000556802.1
CDS GCA 72 bp AAGAGCAGAAGATGCGGGGTAGACGCAGCCAGTGACTaGTGCTATGTGGCAACTGGGGTACGGAGAAGTCTT +
Preference number: 6 (lower is better)
Translates to: KSRRCGVDAASD*CYVATGVRRSL
Trigger: AAGACTTCTCCGTACCCCAGTTGCCACATAGCAGCAGTCACTGGCTGCGTCTACCCCGCATCTTCTGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550447.5
ENST00000550464.5
ENST00000552882.5
CDS GCA 72 bp AGCTGTGGTCTCCACCCACTCTGTAGTTGTTACCTGTaGAGCTGTGCTCTCTGCAGTTGGCATCTGCACAGG +
Preference number: 6 (lower is better)
Translates to: SCGLHPLCSCYL*SCALCSWHLHR
Trigger: CCTGTGCAGATGCCAACTGCAGAGAGCACAGCTGCACAGGTAACAACTACAGAGTGGGTGGAGACCACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548803.5
ENST00000549404.5
CDS CCA 72 bp CATCTGCACAGGTGCAGTGCTTATGACTTCAGTGGTTaGCACCTGCACAGATGTGGTTCCAGAGGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: HLHRCSAYDFSG*HLHRCGSRGLC
Trigger: GCAGAGCCCTCTGGAACCACATCTGTGCAGGTGCCAACCACTGAAGTCATAAGCACTGCACCTGTGCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000449260.6
ENST00000547137.5
ENST00000548493.5
ENST00000548747.6
ENST00000548803.5
ENST00000549404.5
ENST00000549564.1
ENST00000550464.5
ENST00000552882.5
CDS CAA 72 bp ACCACTGCCAGGCTGTTGGTATCAGCCAGAGACACATaGAGGCAGTATGTCCCCGAGCCACCCTTCAGTATC +
Preference number: 6 (lower is better)
Translates to: TTARLLVSARDT*RQYVPEPPFSI
Trigger: GATACTGAAGGGTGGCTCGGGGACATACTGCCTCAATGTGTCTCTGGCTGATACCAACAGCCTGGCAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550447.5
ENST00000550464.5
ENST00000552882.5
CDS CAA 90 bp CTCTGGGCTTCTGTCCACTCTGGATACAGCTGCCTGTTCCAGGCTTaGGTTCTGAGTTGCCTTGAGACACCAAGCCAGTCCTGGTTTCTG +
Preference number: 6 (lower is better)
Translates to: LWASVHSGYSCLFQA*VLSCLETPSQSWFL
Trigger: CAGAAACCAGGACTGGCTTGGTGTCTCAAGGCAACTCAGAACCAAAGCCTGGAACAGGCAGCTGTATCCAGAGTGGACAGAAGCCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000548803.5
ENST00000549233.2
ENST00000549413.1
ENST00000549418.5
ENST00000549430.5
ENST00000550590.5
ENST00000552882.5
CDS GCA 72 bp GGATACAGCTGCCTGTTCCAGGCTTTGGTTCTGAGTTaGCTTGAGACACCAAGCCAGTCCTGGTTTCTGGGT +
Preference number: 6 (lower is better)
Translates to: GYSCLFQALVLS*LETPSQSWFLG
Trigger: ACCCAGAAACCAGGACTGGCTTGGTGTCTCAAGGCAACTCAGAACCAAAGCCTGGAACAGGCAGCTGTATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000548803.5
ENST00000549233.2
ENST00000549413.1
ENST00000549418.5
ENST00000549430.5
ENST00000550590.5
ENST00000552882.5
CDS GCA 72 bp TGGGCCAGGCTCCAGGTAAGTATGAGTGACCACAAGTaGCCGAGAGATCAGGGTTCCACTACTGTCTCCAAA +
Preference number: 6 (lower is better)
Translates to: WARLQVSMSDHK*PRDQGSTTVSK
Trigger: TTTGGAGACAGTAGTGGAACCCTGATCTCTCGGGCACTTGTGGTCACTCATACTTACCTGGAGCCTGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550464.5
ENST00000552882.5
ENST00000556802.1
CDS CCA 72 bp TTGGTTCTGAGTTGCCTTGAGACACCAAGCCAGTCCTaGTTTCTGGGTACTTTTGTAGCCCCCACAGCCAGC +
Preference number: 6 (lower is better)
Translates to: LVLSCLETPSQS*FLGTFVAPTAS
Trigger: GCTGGCTGTGGGGGCTACAAAAGTACCCAGAAACCAGGACTGGCTTGGTGTCTCAAGGCAACTCAGAACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548747.6
ENST00000548803.5
ENST00000549413.1
ENST00000549418.5
ENST00000550590.5
ENST00000552882.5
CDS CCA 72 bp GACATAGGTAGGAAACTTGGACCCAAAGCAGGTACTTaGGAAGAGTGTTCAGCCGCCCCACCGGGGAAGAAA +
Preference number: 6 (lower is better)
Translates to: DIGRKLGPKAGT*EECSAAPPGKK
Trigger: TTTCTTCCCCGGTGGGGCGGCTGAACACTCTTCCCAAGTACCTGCTTTGGGTCCAAGTTTCCTACCTATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552882.5
CDS CAA 72 bp TCTGTCCACTCTGGATACAGCTGCCTGTTCCAGGCTTaGGTTCTGAGTTGCCTTGAGACACCAAGCCAGTCC +
Preference number: 6 (lower is better)
Translates to: SVHSGYSCLFQA*VLSCLETPSQS
Trigger: GGACTGGCTTGGTGTCTCAAGGCAACTCAGAACCAAAGCCTGGAACAGGCAGCTGTATCCAGAGTGGACAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000548803.5
ENST00000549233.2
ENST00000549413.1
ENST00000549418.5
ENST00000549430.5
ENST00000550590.5
ENST00000552882.5
CDS TCA 72 bp ACTCTGGATACAGCTGCCTGTTCCAGGCTTTGGTTCTaGGTTGCCTTGAGACACCAAGCCAGTCCTGGTTTC +
Preference number: 6 (lower is better)
Translates to: TLDTAACSRLWF*VALRHQASPGF
Trigger: GAAACCAGGACTGGCTTGGTGTCTCAAGGCAACTCAGAACCAAAGCCTGGAACAGGCAGCTGTATCCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000548803.5
ENST00000549233.2
ENST00000549413.1
ENST00000549418.5
ENST00000549430.5
ENST00000550590.5
ENST00000552882.5
CDS TCA 72 bp CCTCTGGAGTTGACATCTCTGCCAGTGTGGTACCCATaGCCTCTGAAACTGGCACCTTCTCAGGTGTCATAC +
Preference number: 6 (lower is better)
Translates to: PLELTSLPVWYP*PLKLAPSQVSY
Trigger: GTATGACACCTGAGAAGGTGCCAGTTTCAGAGGTCATGGGTACCACACTGGCAGAGATGTCAACTCCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000449260.6
ENST00000547137.5
ENST00000548493.5
ENST00000548747.6
ENST00000549564.1
ENST00000550464.5
ENST00000552882.5
CDS TCA 72 bp GCCCAGGGAACCTGTAATACTTTCCGTAGACATGATTaGGCTGGCATCTGGACCTTCAGGCTCAGGGATAGG +
Preference number: 6 (lower is better)
Translates to: AQGTCNTFRRHD*AGIWTFRLRDR
Trigger: CCTATCCCTGAGCCTGAAGGTCCAGATGCCAGCTCAATCATGTCTACGGAAAGTATTACAGGTTCCCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000548803.5
ENST00000549404.5
ENST00000550464.5
ENST00000552882.5
CDS TCA 72 bp GTGGGTCTTGGTATTTCCTCTTTCCCCATTTTCAGGTaGCTCGCCGGGCCCTATTCCCTGGAGATTCTGAGA +
Preference number: 6 (lower is better)
Translates to: VGLGISSFPIFR*LAGPYSLEILR
Trigger: TCTCAGAATCTCCAGGGAATAGGGCCCGGCGAGTCACCTGAAAATGGGGAAAGAGGAAATACCAAGACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549233.2
CDS GCA 72 bp TCAAGTCTCTGGGCTTCTGTCCACTCTGGATACAGCTaGCTGTTCCAGGCTTTGGTTCTGAGTTGCCTTGAG +
Preference number: 6 (lower is better)
Translates to: SSLWASVHSGYS*LFQALVLSCLE
Trigger: CTCAAGGCAACTCAGAACCAAAGCCTGGAACAGGCAGCTGTATCCAGAGTGGACAGAAGCCCAGAGACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000449260.6
ENST00000546543.5
ENST00000547137.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000548803.5
ENST00000549233.2
ENST00000549413.1
ENST00000549418.5
ENST00000549430.5
ENST00000550590.5
ENST00000552882.5
CDS GCA 72 bp TTCTTGACCAGGCATGATAAGCTGGGTGCTGACCACTaGCAGGCTGTTGGTATCAGCCAGAGACACATTGAG +
Preference number: 6 (lower is better)
Translates to: FLTRHDKLGADH*QAVGISQRHIE
Trigger: CTCAATGTGTCTCTGGCTGATACCAACAGCCTGGCAGTGGTCAGCACCCAGCTTATCATGCCTGGTCAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000548493.5
ENST00000548747.6
ENST00000550447.5
ENST00000550464.5
ENST00000552882.5
CDS CAA 72 bp TGTCCTCCCCACACCTGGCTCCCATTGATGATGGTATaGTTGACCCAGATAACCTGCCCATCTGGCAATACC +
Preference number: 6 (lower is better)
Translates to: CPPHTWLPLMMV*LTQITCPSGNT
Trigger: GGTATTGCCAGATGGGCAGGTTATCTGGGTCAACAATACCATCATCAATGGGAGCCAGGTGTGGGGAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000449260.6
ENST00000547137.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000548803.5
ENST00000549233.2
ENST00000549418.5
ENST00000549430.5
ENST00000550447.5
ENST00000550590.5
ENST00000552882.5
CDS CAA 72 bp GACCAGCTCTTCCGGATCTTTCGGACTCTTCTAGTCTaGGCCAGCCAACTCTTTCGACACTGCATTTCCCAG +
Preference number: 6 (lower is better)
Translates to: DQLFRIFRTLLV*ASQLFRHCISQ
Trigger: CTGGGAAATGCAGTGTCGAAAGAGTTGGCTGGCCAAGACTAGAAGAGTCCGAAAGATCCGGAAGAGCTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549233.2
CDS TCA 72 bp TACCTGTGCAGCTGTGGTTCCAGAAAGCACCACAATTaGTACCTCTGCAGGTGTCATACCTGTAGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: YLCSCGSRKHHN*YLCRCHTCSLW
Trigger: CCAGAGGCTACAGGTATGACACCTGCAGAGGTATCAATTGTGGTGCTTTCTGGAACCACAGCTGCACAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS GCA 72 bp AAAATCACAGCATCATATGAGAGTACTCAGACCTGCTaGCCACTGAGGAGGGGGCTGTTCTCACCAATGGGA +
Preference number: 6 (lower is better)
Translates to: KITASYESTQTC*PLRRGLFSPMG
Trigger: TCCCATTGGTGAGAACAGCCCCCTCCTCAGTGGGCAGCAGGTCTGAGTACTCTCATATGATGCTGTGATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS GCA 72 bp AGGAAAATCACAGCATCATATGAGAGTACTCAGACCTaGTGCCCACTGAGGAGGGGGCTGTTCTCACCAATG +
Preference number: 6 (lower is better)
Translates to: RKITASYESTQT*CPLRRGLFSPM
Trigger: CATTGGTGAGAACAGCCCCCTCCTCAGTGGGCAGCAGGTCTGAGTACTCTCATATGATGCTGTGATTTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000550464.5
ENST00000552882.5
CDS CCA 72 bp ATGATTACTTCTGAGGGTGTTTGGAAGGCTGTGATATaGGGGGACAGGGAAGGGGTCCTAATGAGGCATTCC +
Preference number: 6 (lower is better)
Translates to: MITSEGVWKAVI*GDREGVLMRHS
Trigger: GGAATGCCTCATTAGGACCCCTTCCCTGTCCCCCCATATCACAGCCTTCCAAACACCCTCAGAAGTAATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550590.5
CDS CCA 72 bp GGCTTCCTGGTTTCCAAAGGAGGCTCCTGGGCCAGGTaGAATTTAACCTTAGGTCGATACATATTTTCCCCA +
Preference number: 6 (lower is better)
Translates to: GFLVSKGGSWAR*NLTLGRYIFSP
Trigger: TGGGGAAAATATGTATCGACCTAAGGTTAAATTCCACCTGGCCCAGGAGCCTCCTTTGGAAACCAGGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552882.5
CDS CCA 72 bp TTGGTTCTGAGTTGCCTTGAGACACCAAGCCAGTCCTaGTTTCTGGGTACTTTTACTGTCTGTGGGAACTCC +
Preference number: 6 (lower is better)
Translates to: LVLSCLETPSQS*FLGTFTVCGNS
Trigger: GGAGTTCCCACAGACAGTAAAAGTACCCAGAAACCAGGACTGGCTTGGTGTCTCAAGGCAACTCAGAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549233.2
CDS GCA 72 bp CTCCCATTGATGATGGTATTGTTGACCCAGATAACCTaGCCATCTGGCAATACCTTTTGGCTTCCAGGGAAG +
Preference number: 6 (lower is better)
Translates to: LPLMMVLLTQIT*PSGNTFWLPGK
Trigger: CTTCCCTGGAAGCCAAAAGGTATTGCCAGATGGGCAGGTTATCTGGGTCAACAATACCATCATCAATGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000449260.6
ENST00000547137.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000548803.5
ENST00000549233.2
ENST00000549418.5
ENST00000549430.5
ENST00000550447.5
ENST00000550590.5
ENST00000552882.5
CDS GCA 72 bp CTGCTGCTATGTGGCAACTGGGGTACGGAGAAGTCTTaGTTCATAAGTCTGCGCCTATATATCAGAGATGCA +
Preference number: 6 (lower is better)
Translates to: LLLCGNWGTEKS*FISLRLYIRDA
Trigger: TGCATCTCTGATATATAGGCGCAGACTTATGAAGCAAGACTTCTCCGTACCCCAGTTGCCACATAGCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000549564.1
ENST00000550447.5
ENST00000550464.5
ENST00000552882.5
CDS CCA 72 bp TTGACCCAGATAACCTGCCCATCTGGCAATACCTTTTaGCTTCCAGGGAAGTTCAAGGCAATAGAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: LTQITCPSGNTF*LPGKFKAIEKE
Trigger: CTCCTTCTCTATTGCCTTGAACTTCCCTGGAAGCCAAAAGGTATTGCCAGATGGGCAGGTTATCTGGGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000449260.6
ENST00000547137.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000548803.5
ENST00000549233.2
ENST00000549413.1
ENST00000549418.5
ENST00000549430.5
ENST00000550447.5
ENST00000550590.5
ENST00000552882.5
CDS CCA 72 bp GATGATGGTATTGTTGACCCAGATAACCTGCCCATCTaGCAATACCTTTTGGCTTCCAGGGAAGTTCAAGGC +
Preference number: 6 (lower is better)
Translates to: DDGIVDPDNLPI*QYLLASREVQG
Trigger: GCCTTGAACTTCCCTGGAAGCCAAAAGGTATTGCCAGATGGGCAGGTTATCTGGGTCAACAATACCATCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000449260.6
ENST00000547137.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000548803.5
ENST00000549233.2
ENST00000549413.1
ENST00000549418.5
ENST00000549430.5
ENST00000550447.5
ENST00000550590.5
ENST00000552882.5
CDS CAA 72 bp GTTGACCCAGATAACCTGCCCATCTGGCAATACCTTTaGGCTTCCAGGGAAGTTCAAGGCAATAGAGAAGGA +
Preference number: 6 (lower is better)
Translates to: VDPDNLPIWQYL*ASREVQGNREG
Trigger: TCCTTCTCTATTGCCTTGAACTTCCCTGGAAGCCAAAAGGTATTGCCAGATGGGCAGGTTATCTGGGTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000449260.6
ENST00000547137.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000548803.5
ENST00000549233.2
ENST00000549413.1
ENST00000549418.5
ENST00000549430.5
ENST00000550447.5
ENST00000550590.5
ENST00000552882.5
CDS CAA 72 bp ACTGCTGCTATGTGGCAACTGGGGTACGGAGAAGTCTaGCTTCATAAGTCTGCGCCTATATATCAGAGATGC +
Preference number: 6 (lower is better)
Translates to: TAAMWQLGYGEV*LHKSAPIYQRC
Trigger: GCATCTCTGATATATAGGCGCAGACTTATGAAGCAAGACTTCTCCGTACCCCAGTTGCCACATAGCAGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000549564.1
ENST00000550447.5
ENST00000550464.5
ENST00000552882.5
CDS CAA 90 bp GATGGTATTGTTGACCCAGATAACCTGCCCATCTGGCAATACCTTTaGGCTTCCAGGGAAGTTCAAGGCAATAGAGAAGGAGGCATTTGC +
Preference number: 6 (lower is better)
Translates to: DGIVDPDNLPIWQYL*ASREVQGNREGGIC
Trigger: GCAAATGCCTCCTTCTCTATTGCCTTGAACTTCCCTGGAAGCCAAAAGGTATTGCCAGATGGGCAGGTTATCTGGGTCAACAATACCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000449260.6
ENST00000547137.5
ENST00000548493.5
ENST00000548689.5
ENST00000548747.6
ENST00000548803.5
ENST00000549233.2
ENST00000549413.1
ENST00000549418.5
ENST00000549430.5
ENST00000550447.5
ENST00000550590.5
ENST00000552882.5
CDS TCA 72 bp CTGTGGGAACTCCTTTGTATAGAGGAGAGTTTTGACTaGCGTCAACGTGGGTCTTGGTATTTCCTCTTTCCC +
Preference number: 6 (lower is better)
Translates to: LWELLCIEESFD*RQRGSWYFLFP
Trigger: GGGAAAGAGGAAATACCAAGACCCACGTTGACGTCAGTCAAAACTCTCCTCTATACAAAGGAGTTCCCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549233.2
CDS GCA 72 bp TCACCATTGATGATGGTATTGTTGACCCAGATAACCTaGCCATCTGGCAATACCTTTTGGCTTCCAGGGAAG +
Preference number: 6 (lower is better)
Translates to: SPLMMVLLTQIT*PSGNTFWLPGK
Trigger: CTTCCCTGGAAGCCAAAAGGTATTGCCAGATGGGCAGGTTATCTGGGTCAACAATACCATCATCAATGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549413.1
CDS TCA 72 bp TCTCGGCACTTTCAATACCCTGGACAATGTCCAGGGTaGCGGAAAAGGAACCATATCGATACAGAACACAAT +
Preference number: 6 (lower is better)
Translates to: SRHFQYPGQCPG*RKRNHIDTEHN
Trigger: ATTGTGTTCTGTATCGATATGGTTCCTTTTCCGTCACCCTGGACATTGTCCAGGGTATTGAAAGTGCCGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000449260.6
ENST00000548493.5
ENST00000548747.6
ENST00000549404.5
ENST00000550464.5
ENST00000550762.1
ENST00000552882.5
CDS CAA 72 bp CCTAGAATAGAGAAGTACTCACCATTGATGATGGTATaGTTGACCCAGATAACCTGCCCATCTGGCAATACC +
Preference number: 6 (lower is better)
Translates to: PRIEKYSPLMMV*LTQITCPSGNT
Trigger: GGTATTGCCAGATGGGCAGGTTATCTGGGTCAACAATACCATCATCAATGGTGAGTACTTCTCTATTCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549413.1
CDS CAA 72 bp GTTGAACCAGAGTTACTGGATTCTGGAGTCACAGGCTaGGAATCAGATAAGACCTGGGAAACCTTATTCTAT +
Preference number: 6 (lower is better)
Translates to: VEPELLDSGVTG*ESDKTWETLFY
Trigger: ATAGAATAAGGTTTCCCAGGTCTTATCTGATTCCAAGCCTGTGACTCCAGAATCCAGTAACTCTGGTTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550762.1
CDS CCA 72 bp TTGAACCAGAGTTACTGGATTCTGGAGTCACAGGCTTaGAATCAGATAAGACCTGGGAAACCTTATTCTATA +
Preference number: 6 (lower is better)
Translates to: LNQSYWILESQA*NQIRPGKPYSI
Trigger: TATAGAATAAGGTTTCCCAGGTCTTATCTGATTCCAAGCCTGTGACTCCAGAATCCAGTAACTCTGGTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550762.1
CDS CAA 72 bp AGAATAGAGAAGTACTCACCATTGATGATGGTATTGTaGACCCAGATAACCTGCCCATCTGGCAATACCTTT +
Preference number: 6 (lower is better)
Translates to: RIEKYSPLMMVL*TQITCPSGNTF
Trigger: AAAGGTATTGCCAGATGGGCAGGTTATCTGGGTCAACAATACCATCATCAATGGTGAGTACTTCTCTATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549413.1