Pregenerated sensors for PMAIP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000141682Ensembl transcript IDs: ENST00000269518.9, ENST00000316660.7, ENST00000590596.1
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCCAAAGAATGATAATCTGGGAAAACTTGAACAGAAATTCACTTTaGTGTATTCCATCTTCCGTTTCCAAGGGCACCCATGAATGCACC | + |
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Preference number: 1 (lower is better) Translates to: SQRMIIWENLNRNSL*CIPSSVSKGTHECT Trigger: GGTGCATTCATGGGTGCCCTTGGAAACGGAAGATGGAATACATCAAAGTGAATTTCTGTTCAAGTTTTCCCAGATTATCATTCTTTGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| 3UTR TCA 90 bp | AAATTCACTTTGATGTATTCCATCTTCCGTTTCCAAGGGCACCCATaGATGCACCTTCACATTCCTCTCAATTACAATGCAGTCTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: KFTLMYSIFRFQGHP*MHLHIPLNYNAVFL Trigger: AAGAAAGACTGCATTGTAATTGAGAGGAATGTGAAGGTGCATTCATGGGTGCCCTTGGAAACGGAAGATGGAATACATCAAAGTGAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316660.7 |
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| 3UTR-3UTR TCA 90 bp | TCCCTTCACAGTAGGCCAGCGGTAATCTTCGGCAAAAACACTAGAACGATTCTCGAAACGTGCACCTCCTaGGAAAACTCTTTTGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: SLHSRPAVIFGKNTRTILETCTS*ENSFEG Trigger: TCCTTCAAAAGAGTTTTCTCAGGAGGTGCACGTTTC...GAGAATCGTTCTAGTGTTTTTGCCGAAGATTACCGCTGGCCTACTGTGAAGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316660.7 |
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| 3UTR-3UTR TCA 90 bp | GTAACGCCCAACAGGAACACATTGAATGAAAGATCATCTGAACAGAAGCAATACTTCCAAGGGCACCCATaGATGCACCTTCACATTCCT | + |
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Preference number: 2 (lower is better) Translates to: VTPNRNTLNERSSEQKQYFQGHP*MHLHIP Trigger: AGGAATGTGAAGGTGCATTCATGGGTGCCCTTGGAA...GTATTGCTTCTGTTCAGATGATCTTTCATTCAATGTGTTCCTGTTGGGCGTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| 3UTR-3UTR TCA 90 bp | TTTCTAGTAACGCCCAACAGGAACACATTGAATGAAAGATCATCTGAACAGAAGTTCCAAGGGCACCCATaGATGCACCTTCACATTCCT | + |
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Preference number: 2 (lower is better) Translates to: FLVTPNRNTLNERSSEQKFQGHP*MHLHIP Trigger: AGGAATGTGAAGGTGCATTCATGGGTGCCCTTGGAA...CTTCTGTTCAGATGATCTTTCATTCAATGTGTTCCTGTTGGGCGTTACTAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| 3UTR-3UTR TCA 90 bp | TTTCTAGTAACGCCCAACAGGAACACATTGAATGAAAGATCATCTGAACAGAAGACAACAACAATGCACTaGACTGTTTCTCCCCAGCCG | + |
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Preference number: 2 (lower is better) Translates to: FLVTPNRNTLNERSSEQKTTTMH*TVSPQP Trigger: CGGCTGGGGAGAAACAGTTCAGTGCATTGTTGTTGT...CTTCTGTTCAGATGATCTTTCATTCAATGTGTTCCTGTTGGGCGTTACTAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| 3UTR-3UTR GCA 90 bp | GTAACGCCCAACAGGAACACATTGAATGAAAGATCATCTGAACAGAAGCAATACAAGGGCACCCATGAATaGACCTTCACATTCCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: VTPNRNTLNERSSEQKQYKGTHE*TFTFLS Trigger: TGAGAGGAATGTGAAGGTGCATTCATGGGTGCCCTT...GTATTGCTTCTGTTCAGATGATCTTTCATTCAATGTGTTCCTGTTGGGCGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316660.7 |
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| 3UTR-3UTR TCA 90 bp | GTTATTTTCCAGTTTTCCATAGTTTCTAGTAACGCCCAACAGGAACACATTGAAACAACAACAATGCACTaGACTGTTTCTCCCCAGCCG | + |
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Preference number: 2 (lower is better) Translates to: VIFQFSIVSSNAQQEHIETTTMH*TVSPQP Trigger: CGGCTGGGGAGAAACAGTTCAGTGCATTGTTGTTGT...TTCAATGTGTTCCTGTTGGGCGTTACTAGAAACTATGGAAAACTGGAAAATAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| 3UTR CAA 90 bp | TGCACCTTCACATTCCTCTCAATTACAATGCAGTCTTTCTTCAAATaGATGAAACGTGCACCTCCTGAGAAAACTCTTTTGAAGGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: CTFTFLSITMQSFFK*MKRAPPEKTLLKES Trigger: GGACTCCTTCAAAAGAGTTTTCTCAGGAGGTGCACGTTTCATCAATTTGAAGAAAGACTGCATTGTAATTGAGAGGAATGTGAAGGTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000316660.7 |
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| 3UTR-3UTR TCA 90 bp | TTTCTAGTAACGCCCAACAGGAACACATTGAATGAAAGATCATCTGAACAGAAGGTGCTGAGTTGGCACTaGAAAGCAAAACACCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: FLVTPNRNTLNERSSEQKVLSWH*KAKHQK Trigger: TTTTTGGTGTTTTGCTTTTCAGTGCCAACTCAGCAC...CTTCTGTTCAGATGATCTTTCATTCAATGTGTTCCTGTTGGGCGTTACTAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| 3UTR-3UTR TCA 90 bp | GTTATTTTCCAGTTTTCCATAGTTTCTAGTAACGCCCAACAGGAACACATTGAAGTGCTGAGTTGGCACTaGAAAGCAAAACACCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: VIFQFSIVSSNAQQEHIEVLSWH*KAKHQK Trigger: TTTTTGGTGTTTTGCTTTTCAGTGCCAACTCAGCAC...TTCAATGTGTTCCTGTTGGGCGTTACTAGAAACTATGGAAAACTGGAAAATAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| 3UTR-3UTR CAA 90 bp | AACTGTTTCTCCCCAGCCGCCCAGTCTAATCACAGGTCATCTCCCTTCACAGTACCTGAGAAAACTCTTTaGAAGGAGTCCCCTCATGCA | + |
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Preference number: 3 (lower is better) Translates to: NCFSPAAQSNHRSSPFTVPEKTL*KESPHA Trigger: TGCATGAGGGGACTCCTTCAAAAGAGTTTTCTCAGG...TACTGTGAAGGGAGATGACCTGTGATTAGACTGGGCGGCTGGGGAGAAACAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316660.7 |
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| 3UTR-3UTR CAA 90 bp | TTCTCCCCAGCCGCCCAGTCTAATCACAGGTCATCTCCCTTCACAGTAGGCCAGGAACAGAAATTCACTTaGATGTATTCCATCTTCCGT | + |
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Preference number: 3 (lower is better) Translates to: FSPAAQSNHRSSPFTVGQEQKFT*MYSIFR Trigger: ACGGAAGATGGAATACATCAAAGTGAATTTCTGTTC...CTGGCCTACTGTGAAGGGAGATGACCTGTGATTAGACTGGGCGGCTGGGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| 3UTR TCA 72 bp | TTGATGTATTCCATCTTCCGTTTCCAAGGGCACCCATaGATGCACCTTCACATTCCTCTCAATTACAATGCA | + |
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Preference number: 3 (lower is better) Translates to: LMYSIFRFQGHP*MHLHIPLNYNA Trigger: TGCATTGTAATTGAGAGGAATGTGAAGGTGCATTCATGGGTGCCCTTGGAAACGGAAGATGGAATACATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316660.7 |
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| 3UTR-3UTR CAA 90 bp | GTAACGCCCAACAGGAACACATTGAATGAAAGATCATCTGAACAGAAGCAATACGAACAGAAATTCACTTaGATGTATTCCATCTTCCGT | + |
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Preference number: 3 (lower is better) Translates to: VTPNRNTLNERSSEQKQYEQKFT*MYSIFR Trigger: ACGGAAGATGGAATACATCAAAGTGAATTTCTGTTC...GTATTGCTTCTGTTCAGATGATCTTTCATTCAATGTGTTCCTGTTGGGCGTTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| 3UTR TCA 72 bp | ATTAAGAGATCACTTTTTGTAGGATGCACACTAATGTaGCAAGGAGCATTTTCCGAACCTTTAGAAACTTCT | + |
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Preference number: 3 (lower is better) Translates to: IKRSLFVGCTLM*QGAFSEPLETS Trigger: AGAAGTTTCTAAAGGTTCGGAAAATGCTCCTTGTCACATTAGTGTGCATCCTACAAAAAGTGATCTCTTAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316660.7 |
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| CDS-3UTR CCA 90 bp | TTCTCCCCAGCCGCCCAGTCTAATCACAGGTCATCTCCCTTCACAGTAGGCCAGTGCAGGCAGGGATGCTaGGATCGGGTGTCCGGACGC | + |
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Preference number: 4 (lower is better) Translates to: FSPAAQSNHRSSPFTVGQCRQGC*DRVSGR Trigger: GCGTCCGGACACCCGATCCCAGCATCCCTGCCTGCA...CTGGCCTACTGTGAAGGGAGATGACCTGTGATTAGACTGGGCGGCTGGGGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR GCA 90 bp | AACTGTTTCTCCCCAGCCGCCCAGTCTAATCACAGGTCATCTCCCTTCACAGTAAGGCATCTCCGCCGGTaGCGCCGCCCACTCAGCTAC | + |
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Preference number: 4 (lower is better) Translates to: NCFSPAAQSNHRSSPFTVRHLRR*RRPLSY Trigger: GTAGCTGAGTGGGCGGCGGCACCGGCGGAGATGCCT...TACTGTGAAGGGAGATGACCTGTGATTAGACTGGGCGGCTGGGGAGAAACAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR CCA 90 bp | TTCTCCCCAGCCGCCCAGTCTAATCACAGGTCATCTCCCTTCACAGTAGGCCAGCCGGGGAAGGGCAAGTaGCGAGGAGGAAAGAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: FSPAAQSNHRSSPFTVGQPGKGK*RGGKRG Trigger: TCCTCTCTTTCCTCCTCGCCACTTGCCCTTCCCCGG...CTGGCCTACTGTGAAGGGAGATGACCTGTGATTAGACTGGGCGGCTGGGGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269518.9 |
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| CDS-3UTR TCA 90 bp | TCCCTTCACAGTAGGCCAGCGGTAATCTTCGGCAAAAACACTAGAACGATTCTCCGCGCGGGGCTCGGTTaGGCGTTCTTGCGCGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: SLHSRPAVIFGKNTRTILRAGLG*AFLRAF Trigger: GAAGGCGCGCAAGAACGCTCAACCGAGCCCCGCGCG...GAGAATCGTTCTAGTGTTTTTGCCGAAGATTACCGCTGGCCTACTGTGAAGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR GCA 90 bp | TTCTCCCCAGCCGCCCAGTCTAATCACAGGTCATCTCCCTTCACAGTAGGCCAGTCGGTTGAGCGTTCTTaGGCGCCTTCTTCCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: FSPAAQSNHRSSPFTVGQSVERS*APSSQA Trigger: TGCCTGGGAAGAAGGCGCGCAAGAACGCTCAACCGA...CTGGCCTACTGTGAAGGGAGATGACCTGTGATTAGACTGGGCGGCTGGGGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR GCA 90 bp | TTCTCCCCAGCCGCCCAGTCTAATCACAGGTCATCTCCCTTCACAGTAGGCCAGCTGGTGAAACGCAGCTaGATCCCAATCGCAAATCCG | + |
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Preference number: 4 (lower is better) Translates to: FSPAAQSNHRSSPFTVGQLVKRS*IPIANP Trigger: CGGATTTGCGATTGGGATGCAGCTGCGTTTCACCAG...CTGGCCTACTGTGAAGGGAGATGACCTGTGATTAGACTGGGCGGCTGGGGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000269518.9 |
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| CDS-3UTR TCA 90 bp | GAAATTCACTTTGATGTATTCCATCTTCCGTTTCCAAGGGCACCCATGAATGCACGCGCGGGGCTCGGTTaGGCGTTCTTGCGCGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: EIHFDVFHLPFPRAPMNARAGLG*AFLRAF Trigger: GAAGGCGCGCAAGAACGCTCAACCGAGCCCCGCGCG...TGCATTCATGGGTGCCCTTGGAAACGGAAGATGGAATACATCAAAGTGAATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR GCA 90 bp | AACTGTTTCTCCCCAGCCGCCCAGTCTAATCACAGGTCATCTCCCTTCACAGTAGAACACGAACAGTCCTaGAGGCAGGGATGCTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: NCFSPAAQSNHRSSPFTVEHEQS*RQGCWD Trigger: ATCCCAGCATCCCTGCCTGCAGGACTGTTCGTGTTC...TACTGTGAAGGGAGATGACCTGTGATTAGACTGGGCGGCTGGGGAGAAACAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR GCA 90 bp | GAAATTCACTTTGATGTATTCCATCTTCCGTTTCCAAGGGCACCCATGAATGCATCCTGCAGGCAGGGATaGTGGGATCGGGTGTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: EIHFDVFHLPFPRAPMNASCRQG*WDRVSG Trigger: TCCGGACACCCGATCCCAGCATCCCTGCCTGCAGGA...TGCATTCATGGGTGCCCTTGGAAACGGAAGATGGAATACATCAAAGTGAATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR GCA 90 bp | AGGATGCACACTAATGTGACAAGGAGCATTTTCCGAACCTTTAGAAACTTCTTTAGGCATCTCCGCCGGTaGCGCCGCCCACTCAGCTAC | + |
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Preference number: 4 (lower is better) Translates to: RMHTNVTRSIFRTFRNFFRHLRR*RRPLSY Trigger: GTAGCTGAGTGGGCGGCGGCACCGGCGGAGATGCCT...AAAGAAGTTTCTAAAGGTTCGGAAAATGCTCCTTGTCACATTAGTGTGCATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316660.7 |
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| CDS-3UTR GCA 90 bp | TCCCTTCACAGTAGGCCAGCGGTAATCTTCGGCAAAAACACTAGAACGATTCTCCGACTTCCAGCTACTTaGACTTGTTCCTCGTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SLHSRPAVIFGKNTRTILRLPAT*TCSSWP Trigger: GGGCCACGAGGAACAAGTGCAAGTAGCTGGAAGTCG...GAGAATCGTTCTAGTGTTTTTGCCGAAGATTACCGCTGGCCTACTGTGAAGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000269518.9 |
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| CDS-3UTR CCA 90 bp | GTTATTTTCCAGTTTTCCATAGTTTCTAGTAACGCCCAACAGGAACACATTGAAGACTTCCAGCTCTGCTaGAGCCCGCGCGGGGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: VIFQFSIVSSNAQQEHIEDFQLC*SPRGAR Trigger: CCGAGCCCCGCGCGGGCTCCAGCAGAGCTGGAAGTC...TTCAATGTGTTCCTGTTGGGCGTTACTAGAAACTATGGAAAACTGGAAAATAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000316660.7 |
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| CDS-3UTR GCA 90 bp | AACTGTTTCTCCCCAGCCGCCCAGTCTAATCACAGGTCATCTCCCTTCACAGTAAAGGGCACCCATGAATaGACCTTCACATTCCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: NCFSPAAQSNHRSSPFTVKGTHE*TFTFLS Trigger: TGAGAGGAATGTGAAGGTGCATTCATGGGTGCCCTT...TACTGTGAAGGGAGATGACCTGTGATTAGACTGGGCGGCTGGGGAGAAACAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR CCA 90 bp | TTTCTAGTAACGCCCAACAGGAACACATTGAATGAAAGATCATCTGAACAGAAGTGCAGGCAGGGATGCTaGGATCGGGTGTCCGGACGC | + |
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Preference number: 4 (lower is better) Translates to: FLVTPNRNTLNERSSEQKCRQGC*DRVSGR Trigger: GCGTCCGGACACCCGATCCCAGCATCCCTGCCTGCA...CTTCTGTTCAGATGATCTTTCATTCAATGTGTTCCTGTTGGGCGTTACTAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR TCA 90 bp | AACTGTTTCTCCCCAGCCGCCCAGTCTAATCACAGGTCATCTCCCTTCACAGTAATGCAGTCAGGTTCCTaGGCAGAAGAGTTTGGATAT | + |
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Preference number: 4 (lower is better) Translates to: NCFSPAAQSNHRSSPFTVMQSGS*AEEFGY Trigger: ATATCCAAACTCTTCTGCTCAGGAACCTGACTGCAT...TACTGTGAAGGGAGATGACCTGTGATTAGACTGGGCGGCTGGGGAGAAACAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR CCA 90 bp | GTAACGCCCAACAGGAACACATTGAATGAAAGATCATCTGAACAGAAGCAATACACCTCAGCCTCCAACTaGAGCACCTCGGACAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VTPNRNTLNERSSEQKQYTSASN*STSDSC Trigger: GCAGCTGTCCGAGGTGCTCCAGTTGGAGGCTGAGGT...GTATTGCTTCTGTTCAGATGATCTTTCATTCAATGTGTTCCTGTTGGGCGTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR TCA 90 bp | ATATTGAATGTTCAGTCTACTGATTTACTGGCCCCAAGTAACCCTCCTATACTTCTGCAGGACGCGAGCTaGACACGAACAGTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: ILNVQSTDLLAPSNPPILLQDAS*TRTVLQ Trigger: CTGCAGGACTGTTCGTGTTCAGCTCGCGTCCTGCAG...AAGTATAGGAGGGTTACTTGGGGCCAGTAAATCAGTAGACTGAACATTCAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR GCA 90 bp | GTTATTTTCCAGTTTTCCATAGTTTCTAGTAACGCCCAACAGGAACACATTGAATCCTGCAGGCAGGGATaGTGGGATCGGGTGTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: VIFQFSIVSSNAQQEHIESCRQG*WDRVSG Trigger: TCCGGACACCCGATCCCAGCATCCCTGCCTGCAGGA...TTCAATGTGTTCCTGTTGGGCGTTACTAGAAACTATGGAAAACTGGAAAATAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR GCA 90 bp | TCCCTTCACAGTAGGCCAGCGGTAATCTTCGGCAAAAACACTAGAACGATTCTCAAGGGCACCCATGAATaGACCTTCACATTCCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: SLHSRPAVIFGKNTRTILKGTHE*TFTFLS Trigger: TGAGAGGAATGTGAAGGTGCATTCATGGGTGCCCTT...GAGAATCGTTCTAGTGTTTTTGCCGAAGATTACCGCTGGCCTACTGTGAAGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR GCA 90 bp | ATATTGAATGTTCAGTCTACTGATTTACTGGCCCCAAGTAACCCTCCTATACTTCCGGACGCGCGGAGATaGCAACTACACACGGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: ILNVQSTDLLAPSNPPILPDARR*QLHTVS Trigger: ACTCACCGTGTGTAGTTGGCATCTCCGCGCGTCCGG...AAGTATAGGAGGGTTACTTGGGGCCAGTAAATCAGTAGACTGAACATTCAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316660.7 |
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| CDS-3UTR TCA 90 bp | GTTATTTTCCAGTTTTCCATAGTTTCTAGTAACGCCCAACAGGAACACATTGAACTGCAGGACGCGAGCTaGACACGAACAGTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: VIFQFSIVSSNAQQEHIELQDAS*TRTVLQ Trigger: CTGCAGGACTGTTCGTGTTCAGCTCGCGTCCTGCAG...TTCAATGTGTTCCTGTTGGGCGTTACTAGAAACTATGGAAAACTGGAAAATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR GCA 90 bp | ATATTGAATGTTCAGTCTACTGATTTACTGGCCCCAAGTAACCCTCCTATACTTTCGGTTGAGCGTTCTTaGGCGCCTTCTTCCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: ILNVQSTDLLAPSNPPILSVERS*APSSQA Trigger: TGCCTGGGAAGAAGGCGCGCAAGAACGCTCAACCGA...AAGTATAGGAGGGTTACTTGGGGCCAGTAAATCAGTAGACTGAACATTCAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR GCA 90 bp | AACTGTTTCTCCCCAGCCGCCCAGTCTAATCACAGGTCATCTCCCTTCACAGTAAGATTCAGAAGTTTCTaGCGGAAGTTCAGTTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: NCFSPAAQSNHRSSPFTVRFRSF*RKFSLS Trigger: AGACAAACTGAACTTCCGGCAGAAACTTCTGAATCT...TACTGTGAAGGGAGATGACCTGTGATTAGACTGGGCGGCTGGGGAGAAACAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR CCA 90 bp | GTTATTTTCCAGTTTTCCATAGTTTCTAGTAACGCCCAACAGGAACACATTGAAACCTCAGCCTCCAACTaGAGCACCTCGGACAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VIFQFSIVSSNAQQEHIETSASN*STSDSC Trigger: GCAGCTGTCCGAGGTGCTCCAGTTGGAGGCTGAGGT...TTCAATGTGTTCCTGTTGGGCGTTACTAGAAACTATGGAAAACTGGAAAATAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR CCA 90 bp | AATCTGGGAAAACTTGAACAGAAATTCACTTTGATGTATTCCATCTTCCGTTTCATCGCAAATCCGGCTTaGTCCCTCGCCGTACCCGCC | + |
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Preference number: 4 (lower is better) Translates to: NLGKLEQKFTLMYSIFRFIANPA*SLAVPA Trigger: GGCGGGTACGGCGAGGGACCAAGCCGGATTTGCGAT...GAAACGGAAGATGGAATACATCAAAGTGAATTTCTGTTCAAGTTTTCCCAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000269518.9 |
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| CDS-3UTR TCA 90 bp | ATATTGAATGTTCAGTCTACTGATTTACTGGCCCCAAGTAACCCTCCTATACTTGCTTTTTGCCCCTGGTaGAACGCAGCTGCATCCCAA | + |
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Preference number: 4 (lower is better) Translates to: ILNVQSTDLLAPSNPPILAFCPW*NAAASQ Trigger: TTGGGATGCAGCTGCGTTTCACCAGGGGCAAAAAGC...AAGTATAGGAGGGTTACTTGGGGCCAGTAAATCAGTAGACTGAACATTCAATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000269518.9 |
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| CDS-3UTR TCA 90 bp | GAAATTCACTTTGATGTATTCCATCTTCCGTTTCCAAGGGCACCCATGAATGCAACAACAACAATGCACTaGACTGTTTCTCCCCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: EIHFDVFHLPFPRAPMNATTTMH*TVSPQP Trigger: CGGCTGGGGAGAAACAGTTCAGTGCATTGTTGTTGT...TGCATTCATGGGTGCCCTTGGAAACGGAAGATGGAATACATCAAAGTGAATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR GCA 90 bp | TTTCTAGTAACGCCCAACAGGAACACATTGAATGAAAGATCATCTGAACAGAAGGAACACGAACAGTCCTaGAGGCAGGGATGCTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: FLVTPNRNTLNERSSEQKEHEQS*RQGCWD Trigger: ATCCCAGCATCCCTGCCTGCAGGACTGTTCGTGTTC...CTTCTGTTCAGATGATCTTTCATTCAATGTGTTCCTGTTGGGCGTTACTAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR GCA 90 bp | AATCTGGGAAAACTTGAACAGAAATTCACTTTGATGTATTCCATCTTCCGTTTCAGCACCTCGGACAGCTaGAGGACGCGAGCTGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: NLGKLEQKFTLMYSIFRFSTSDS*RTRAEH Trigger: GTGTTCAGCTCGCGTCCTGCAGCTGTCCGAGGTGCT...GAAACGGAAGATGGAATACATCAAAGTGAATTTCTGTTCAAGTTTTCCCAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR CCA 90 bp | AATCTGGGAAAACTTGAACAGAAATTCACTTTGATGTATTCCATCTTCCGTTTCTGCACTTGTTCCTCGTaGCCCCGGGGAAGGGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NLGKLEQKFTLMYSIFRFCTCSS*PRGRAS Trigger: ACTTGCCCTTCCCCGGGGCCACGAGGAACAAGTGCA...GAAACGGAAGATGGAATACATCAAAGTGAATTTCTGTTCAAGTTTTCCCAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000269518.9 |
||
| CDS-3UTR TCA 90 bp | ATATTGAATGTTCAGTCTACTGATTTACTGGCCCCAAGTAACCCTCCTATACTTCCAAATCTCCTGAGTTaGGTAGCACACTCGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILNVQSTDLLAPSNPPILPNLLS*VAHSTS Trigger: GGAAGTCGAGTGTGCTACTCAACTCAGGAGATTTGG...AAGTATAGGAGGGTTACTTGGGGCCAGTAAATCAGTAGACTGAACATTCAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR TCA 90 bp | ATATTGAATGTTCAGTCTACTGATTTACTGGCCCCAAGTAACCCTCCTATACTTCCTCATGCAAGTTTTTaGTGCAGTCAGGTTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILNVQSTDLLAPSNPPILPHASF*CSQVPE Trigger: CTCAGGAACCTGACTGCATCAAAAACTTGCATGAGG...AAGTATAGGAGGGTTACTTGGGGCCAGTAAATCAGTAGACTGAACATTCAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR TCA 90 bp | TTTCTAGTAACGCCCAACAGGAACACATTGAATGAAAGATCATCTGAACAGAAGCCTCATGCAAGTTTTTaGTGCAGTCAGGTTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLVTPNRNTLNERSSEQKPHASF*CSQVPE Trigger: CTCAGGAACCTGACTGCATCAAAAACTTGCATGAGG...CTTCTGTTCAGATGATCTTTCATTCAATGTGTTCCTGTTGGGCGTTACTAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR TCA 90 bp | GGTAATATGTATAAACCGAATCATATACAATGTGCTGAGTTGGCACTGAAAAGCTTCCAAGGGCACCCATaGATGCACCTTCACATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GNMYKPNHIQCAELALKSFQGHP*MHLHIP Trigger: AGGAATGTGAAGGTGCATTCATGGGTGCCCTTGGAA...GCTTTTCAGTGCCAACTCAGCACATTGTATATGATTCGGTTTATACATATTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR GCA 90 bp | GTAACGCCCAACAGGAACACATTGAATGAAAGATCATCTGAACAGAAGCAATACGAAGGAGTCCCCTCATaGAAGTTTTTGATGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTPNRNTLNERSSEQKQYEGVPS*KFLMQS Trigger: TGACTGCATCAAAAACTTGCATGAGGGGACTCCTTC...GTATTGCTTCTGTTCAGATGATCTTTCATTCAATGTGTTCCTGTTGGGCGTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR TCA 90 bp | AATCTGGGAAAACTTGAACAGAAATTCACTTTGATGTATTCCATCTTCCGTTTCCCAAATCTCCTGAGTTaGGTAGCACACTCGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NLGKLEQKFTLMYSIFRFPNLLS*VAHSTS Trigger: GGAAGTCGAGTGTGCTACTCAACTCAGGAGATTTGG...GAAACGGAAGATGGAATACATCAAAGTGAATTTCTGTTCAAGTTTTCCCAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
||
| CDS-3UTR GCA 90 bp | GAAATTCACTTTGATGTATTCCATCTTCCGTTTCCAAGGGCACCCATGAATGCAAGATTCAGAAGTTTCTaGCGGAAGTTCAGTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EIHFDVFHLPFPRAPMNARFRSF*RKFSLS Trigger: AGACAAACTGAACTTCCGGCAGAAACTTCTGAATCT...TGCATTCATGGGTGCCCTTGGAAACGGAAGATGGAATACATCAAAGTGAATTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR GCA 90 bp | TTTCTAGTAACGCCCAACAGGAACACATTGAATGAAAGATCATCTGAACAGAAGCAGCAACAACAACAATaGACTGAACTGTTTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FLVTPNRNTLNERSSEQKQQQQQ*TELFLP Trigger: GGGGAGAAACAGTTCAGTGCATTGTTGTTGTTGCTG...CTTCTGTTCAGATGATCTTTCATTCAATGTGTTCCTGTTGGGCGTTACTAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
||
| CDS-3UTR CCA 90 bp | TTTCTAGTAACGCCCAACAGGAACACATTGAATGAAAGATCATCTGAACAGAAGAGTCTACTGATTTACTaGCCCCAAGTAACCCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: FLVTPNRNTLNERSSEQKSLLIY*PQVTLL Trigger: TAGGAGGGTTACTTGGGGCCAGTAAATCAGTAGACT...CTTCTGTTCAGATGATCTTTCATTCAATGTGTTCCTGTTGGGCGTTACTAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR TCA 90 bp | GGTAATATGTATAAACCGAATCATATACAATGTGCTGAGTTGGCACTGAAAAGCATGCAGTCAGGTTCCTaGGCAGAAGAGTTTGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: GNMYKPNHIQCAELALKSMQSGS*AEEFGY Trigger: ATATCCAAACTCTTCTGCTCAGGAACCTGACTGCAT...GCTTTTCAGTGCCAACTCAGCACATTGTATATGATTCGGTTTATACATATTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
||
| CDS-3UTR TCA 90 bp | GTTATTTTCCAGTTTTCCATAGTTTCTAGTAACGCCCAACAGGAACACATTGAAGAAACGTGCACCTCCTaGGAAAACTCTTTTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VIFQFSIVSSNAQQEHIEETCTS*ENSFEG Trigger: TCCTTCAAAAGAGTTTTCTCAGGAGGTGCACGTTTC...TTCAATGTGTTCCTGTTGGGCGTTACTAGAAACTATGGAAAACTGGAAAATAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR TCA 90 bp | GGTAATATGTATAAACCGAATCATATACAATGTGCTGAGTTGGCACTGAAAAGCGAAACGTGCACCTCCTaGGAAAACTCTTTTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GNMYKPNHIQCAELALKSETCTS*ENSFEG Trigger: TCCTTCAAAAGAGTTTTCTCAGGAGGTGCACGTTTC...GCTTTTCAGTGCCAACTCAGCACATTGTATATGATTCGGTTTATACATATTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
||
| CDS-3UTR GCA 90 bp | GTTATTTTCCAGTTTTCCATAGTTTCTAGTAACGCCCAACAGGAACACATTGAAGAAGGAGTCCCCTCATaGAAGTTTTTGATGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VIFQFSIVSSNAQQEHIEEGVPS*KFLMQS Trigger: TGACTGCATCAAAAACTTGCATGAGGGGACTCCTTC...TTCAATGTGTTCCTGTTGGGCGTTACTAGAAACTATGGAAAACTGGAAAATAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR CCA 90 bp | GGTAATATGTATAAACCGAATCATATACAATGTGCTGAGTTGGCACTGAAAAGCAGTCTACTGATTTACTaGCCCCAAGTAACCCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GNMYKPNHIQCAELALKSSLLIY*PQVTLL Trigger: TAGGAGGGTTACTTGGGGCCAGTAAATCAGTAGACT...GCTTTTCAGTGCCAACTCAGCACATTGTATATGATTCGGTTTATACATATTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR TCA 90 bp | ATATTGAATGTTCAGTCTACTGATTTACTGGCCCCAAGTAACCCTCCTATACTTCCAACAGGAACACATTaGATGAAAGATCATCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILNVQSTDLLAPSNPPILPTGTH*MKDHLN Trigger: GTTCAGATGATCTTTCATTCAATGTGTTCCTGTTGG...AAGTATAGGAGGGTTACTTGGGGCCAGTAAATCAGTAGACTGAACATTCAATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR TCA 90 bp | AATCTGGGAAAACTTGAACAGAAATTCACTTTGATGTATTCCATCTTCCGTTTCCCAACAGGAACACATTaGATGAAAGATCATCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NLGKLEQKFTLMYSIFRFPTGTH*MKDHLN Trigger: GTTCAGATGATCTTTCATTCAATGTGTTCCTGTTGG...GAAACGGAAGATGGAATACATCAAAGTGAATTTCTGTTCAAGTTTTCCCAGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS GCA 90 bp | CTTCCAGCTCTGCTGGAGCCCGCGCGGGGCTCGGTTGAGCGTTCTTaGGCGCCTTCTTCCCAGGCATCTCCGCCGGTGCCGCCGCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: LPALLEPARGSVERS*APSSQASPPVPPPT Trigger: AGTGGGCGGCGGCACCGGCGGAGATGCCTGGGAAGAAGGCGCGCAAGAACGCTCAACCGAGCCCCGCGCGGGCTCCAGCAGAGCTGGAAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316660.7 |
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| CDS TCA 90 bp | GCACACTCGACTTCCAGCTCTGCTGGAGCCCGCGCGGGGCTCGGTTaGGCGTTCTTGCGCGCCTTCTTCCCAGGCATCTCCGCCGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AHSTSSSAGARAGLG*AFLRAFFPGISAGA Trigger: GGCACCGGCGGAGATGCCTGGGAAGAAGGCGCGCAAGAACGCTCAACCGAGCCCCGCGCGGGCTCCAGCAGAGCTGGAAGTCGAGTGTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316660.7 |
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| CDS GCA 90 bp | CGGTTGAGCGTTCTTGCGCGCCTTCTTCCCAGGCATCTCCGCCGGTaGCGCCGCCCACTCAGCTACAGAGCCCGGGAACCTCAGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RLSVLARLLPRHLRR*RRPLSYRAREPQPP Trigger: TGGAGGCTGAGGTTCCCGGGCTCTGTAGCTGAGTGGGCGGCGGCACCGGCGGAGATGCCTGGGAAGAAGGCGCGCAAGAACGCTCAACCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000269518.9 ENST00000316660.7 ENST00000590596.1 |
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| CDS CCA 90 bp | TTGCCCCTGGTGAAACGCAGCTGCATCCCAATCGCAAATCCGGCTTaGTCCCTCGCCGTACCCGCCGTACCCGCCGGTCCTGCTGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPLVKRSCIPIANPA*SLAVPAVPAGPAGA Trigger: GGCTCCAGCAGGACCGGCGGGTACGGCGGGTACGGCGAGGGACCAAGCCGGATTTGCGATTGGGATGCAGCTGCGTTTCACCAGGGGCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000590596.1 |
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| CDS GCA 90 bp | AGCACCTCGGACAGCTGCAGGACGCGAGCTGAACACGAACAGTCCTaGAGGCAGGGATGCTGGGATCGGGTGTCCGGACGCGCGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: STSDSCRTRAEHEQS*RQGCWDRVSGRAEM Trigger: CATCTCCGCGCGTCCGGACACCCGATCCCAGCATCCCTGCCTGCAGGACTGTTCGTGTTCAGCTCGCGTCCTGCAGCTGTCCGAGGTGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS GCA 90 bp | TCTCTGGAAGCGCTGGGAGTCCAGGCGGTCCCCGGGGCTCTCTCCTaGCCCTTCTGCCGCGACAATGACTTTCTCCTAGAGACAGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLEALGVQAVPGALS*PFCRDNDFLLETAA Trigger: GGCGGCTGTCTCTAGGAGAAAGTCATTGTCGCGGCAGAAGGGGCAGGAGAGAGCCCCGGGGACCGCCTGGACTCCCAGCGCTTCCAGAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590596.1 |
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| CDS CCA 90 bp | CCGCCGCCCACTCAGCTACAGAGCCCGGGAACCTCAGCCTCCAACTaGAGCACCTCGGACAGCTGCAGGACGCGAGCTGAACACGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: PPPTQLQSPGTSASN*STSDSCRTRAEHEQ Trigger: CTGTTCGTGTTCAGCTCGCGTCCTGCAGCTGTCCGAGGTGCTCCAGTTGGAGGCTGAGGTTCCCGGGCTCTGTAGCTGAGTGGGCGGCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000269518.9 ENST00000316660.7 ENST00000590596.1 |
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| CDS GCA 90 bp | CAGAGCCCGGGAACCTCAGCCTCCAACTGGAGCACCTCGGACAGCTaGAGGACGCGAGCTGAACACGAACAGTCCTGCAGGCAGGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: QSPGTSASNWSTSDS*RTRAEHEQSCRQGC Trigger: GCATCCCTGCCTGCAGGACTGTTCGTGTTCAGCTCGCGTCCTGCAGCTGTCCGAGGTGCTCCAGTTGGAGGCTGAGGTTCCCGGGCTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000269518.9 ENST00000316660.7 ENST00000590596.1 |
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| CDS TCA 90 bp | CTCAGCCTCCAACTGGAGCACCTCGGACAGCTGCAGGACGCGAGCTaGACACGAACAGTCCTGCAGGCAGGGATGCTGGGATCGGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSLQLEHLGQLQDAS*TRTVLQAGMLGSGV Trigger: GACACCCGATCCCAGCATCCCTGCCTGCAGGACTGTTCGTGTTCAGCTCGCGTCCTGCAGCTGTCCGAGGTGCTCCAGTTGGAGGCTGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000269518.9 ENST00000316660.7 ENST00000590596.1 |
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| CDS CCA 90 bp | TGCAGGACGCGAGCTGAACACGAACAGTCCTGCAGGCAGGGATGCTaGGATCGGGTGTCCGGACGCGCGGAGATGCCAACTACACACGGT | + |
|
Preference number: 5 (lower is better) Translates to: CRTRAEHEQSCRQGC*DRVSGRAEMPTTHG Trigger: ACCGTGTGTAGTTGGCATCTCCGCGCGTCCGGACACCCGATCCCAGCATCCCTGCCTGCAGGACTGTTCGTGTTCAGCTCGCGTCCTGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316660.7 |
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| CDS GCA 90 bp | GAAAGAGAGGAGGAAAGGAGCTTTTTGCCCCTGGTGAAACGCAGCTaGATCCCAATCGCAAATCCGGCTTGGTCCCTCGCCGTACCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: EREEERSFLPLVKRS*IPIANPAWSLAVPA Trigger: GGCGGGTACGGCGAGGGACCAAGCCGGATTTGCGATTGGGATGCAGCTGCGTTTCACCAGGGGCAAAAAGCTCCTTTCCTCCTCTCTTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000590596.1 |
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| CDS-3UTR CAA 90 bp | TCCCTTCACAGTAGGCCAGCGGTAATCTTCGGCAAAAACACTAGAACGATTCTCCCGCGCGGGGCTCGGTaGAGCGTTCTTGCGCGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLHSRPAVIFGKNTRTILPRGAR*SVLARL Trigger: AAGGCGCGCAAGAACGCTCAACCGAGCCCCGCGCGG...GAGAATCGTTCTAGTGTTTTTGCCGAAGATTACCGCTGGCCTACTGTGAAGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS TCA 90 bp | AGAAGTTTCTGCCGGAAGTTCAGTTTGTCTCCAAATCTCCTGAGTTaGGTAGCACACTCGACTTCCAGCTCTGCTGGAGCCCGCGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSFCRKFSLSPNLLS*VAHSTSSSAGARAG Trigger: CCCCGCGCGGGCTCCAGCAGAGCTGGAAGTCGAGTGTGCTACTCAACTCAGGAGATTTGGAGACAAACTGAACTTCCGGCAGAAACTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316660.7 |
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| CDS-3UTR CAA 90 bp | TCCCTTCACAGTAGGCCAGCGGTAATCTTCGGCAAAAACACTAGAACGATTCTCAATCGCAAATCCGGCTaGGTCCCTCGCCGTACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SLHSRPAVIFGKNTRTILNRKSG*VPRRTR Trigger: GCGGGTACGGCGAGGGACCAAGCCGGATTTGCGATT...GAGAATCGTTCTAGTGTTTTTGCCGAAGATTACCGCTGGCCTACTGTGAAGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000269518.9 |
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| CDS-3UTR CAA 90 bp | GTAACGCCCAACAGGAACACATTGAATGAAAGATCATCTGAACAGAAGCAATACTCCAGCTACTTGCACTaGTTCCTCGTGGCCCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VTPNRNTLNERSSEQKQYSSYLH*FLVAPG Trigger: CCCCGGGGCCACGAGGAACAAGTGCAAGTAGCTGGA...GTATTGCTTCTGTTCAGATGATCTTTCATTCAATGTGTTCCTGTTGGGCGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000269518.9 |
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| CDS TCA 90 bp | AGAAGTTTCTGCCGGAAGTTCAGTTTGTCTCCAAATCTCCTGAGTTaGGTAGCACACTCGACTTCCAGCTACTTGCACTTGTTCCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSFCRKFSLSPNLLS*VAHSTSSYLHLFLV Trigger: CACGAGGAACAAGTGCAAGTAGCTGGAAGTCGAGTGTGCTACTCAACTCAGGAGATTTGGAGACAAACTGAACTTCCGGCAGAAACTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000269518.9 |
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| CDS-3UTR CAA 90 bp | GAAATTCACTTTGATGTATTCCATCTTCCGTTTCCAAGGGCACCCATGAATGCAGAGGAAAGGAGCTTTTaGCCCCTGGTGAAACGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EIHFDVFHLPFPRAPMNAEERSF*PLVKRS Trigger: GCTGCGTTTCACCAGGGGCAAAAAGCTCCTTTCCTC...TGCATTCATGGGTGCCCTTGGAAACGGAAGATGGAATACATCAAAGTGAATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269518.9 |
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| CDS-3UTR CAA 90 bp | GTTATTTTCCAGTTTTCCATAGTTTCTAGTAACGCCCAACAGGAACACATTGAATCGACTTCCAGCTACTaGCACTTGTTCCTCGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VIFQFSIVSSNAQQEHIESTSSY*HLFLVA Trigger: GGCCACGAGGAACAAGTGCAAGTAGCTGGAAGTCGA...TTCAATGTGTTCCTGTTGGGCGTTACTAGAAACTATGGAAAACTGGAAAATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269518.9 |
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| CDS CCA 90 bp | CTCATGCAAGTTTTTGATGCAGTCAGGTTCCTGAGCAGAAGAGTTTaGATATCAGATTCAGAAGTTTCTGCCGGAAGTTCAGTTTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LMQVFDAVRFLSRRV*ISDSEVSAGSSVCL Trigger: GAGACAAACTGAACTTCCGGCAGAAACTTCTGAATCTGATATCCAAACTCTTCTGCTCAGGAACCTGACTGCATCAAAAACTTGCATGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000269518.9 ENST00000316660.7 ENST00000590596.1 |
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| CDS-3UTR CAA 90 bp | GTAACGCCCAACAGGAACACATTGAATGAAAGATCATCTGAACAGAAGCAATACTCCAAATCTCCTGAGTaGAGTAGCACACTCGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: VTPNRNTLNERSSEQKQYSKSPE*SSTLDF Trigger: GAAGTCGAGTGTGCTACTCAACTCAGGAGATTTGGA...GTATTGCTTCTGTTCAGATGATCTTTCATTCAATGTGTTCCTGTTGGGCGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR CAA 90 bp | GTTATTTTCCAGTTTTCCATAGTTTCTAGTAACGCCCAACAGGAACACATTGAATCCAAATCTCCTGAGTaGAGTAGCACACTCGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: VIFQFSIVSSNAQQEHIESKSPE*SSTLDF Trigger: GAAGTCGAGTGTGCTACTCAACTCAGGAGATTTGGA...TTCAATGTGTTCCTGTTGGGCGTTACTAGAAACTATGGAAAACTGGAAAATAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR CAA 90 bp | GTAACGCCCAACAGGAACACATTGAATGAAAGATCATCTGAACAGAAGCAATACCCTGAGCAGAAGAGTTaGGATATCAGATTCAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VTPNRNTLNERSSEQKQYPEQKS*DIRFRS Trigger: ACTTCTGAATCTGATATCCAAACTCTTCTGCTCAGG...GTATTGCTTCTGTTCAGATGATCTTTCATTCAATGTGTTCCTGTTGGGCGTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR CAA 90 bp | GGTAATATGTATAAACCGAATCATATACAATGTGCTGAGTTGGCACTGAAAAGCCCTGAGAAAACTCTTTaGAAGGAGTCCCCTCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: GNMYKPNHIQCAELALKSPEKTL*KESPHA Trigger: TGCATGAGGGGACTCCTTCAAAAGAGTTTTCTCAGG...GCTTTTCAGTGCCAACTCAGCACATTGTATATGATTCGGTTTATACATATTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR CAA 90 bp | ATATTGAATGTTCAGTCTACTGATTTACTGGCCCCAAGTAACCCTCCTATACTTCCTGAGCAGAAGAGTTaGGATATCAGATTCAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ILNVQSTDLLAPSNPPILPEQKS*DIRFRS Trigger: ACTTCTGAATCTGATATCCAAACTCTTCTGCTCAGG...AAGTATAGGAGGGTTACTTGGGGCCAGTAAATCAGTAGACTGAACATTCAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
||
| CDS-3UTR CAA 90 bp | AATCTGGGAAAACTTGAACAGAAATTCACTTTGATGTATTCCATCTTCCGTTTCCCTGAGAAAACTCTTTaGAAGGAGTCCCCTCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: NLGKLEQKFTLMYSIFRFPEKTL*KESPHA Trigger: TGCATGAGGGGACTCCTTCAAAAGAGTTTTCTCAGG...GAAACGGAAGATGGAATACATCAAAGTGAATTTCTGTTCAAGTTTTCCCAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR CAA 90 bp | TTTCTAGTAACGCCCAACAGGAACACATTGAATGAAAGATCATCTGAACAGAAGATACAATGTGCTGAGTaGGCACTGAAAAGCAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: FLVTPNRNTLNERSSEQKIQCAE*ALKSKT Trigger: TGTTTTGCTTTTCAGTGCCAACTCAGCACATTGTAT...CTTCTGTTCAGATGATCTTTCATTCAATGTGTTCCTGTTGGGCGTTACTAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
||
| CDS-3UTR CAA 90 bp | ATATTGAATGTTCAGTCTACTGATTTACTGGCCCCAAGTAACCCTCCTATACTTCCCAACAGGAACACATaGAATGAAAGATCATCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ILNVQSTDLLAPSNPPILPNRNT*NERSSE Trigger: TTCAGATGATCTTTCATTCAATGTGTTCCTGTTGGG...AAGTATAGGAGGGTTACTTGGGGCCAGTAAATCAGTAGACTGAACATTCAATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR CAA 90 bp | TTTCTAGTAACGCCCAACAGGAACACATTGAATGAAAGATCATCTGAACAGAAGGAACAGAAATTCACTTaGATGTATTCCATCTTCCGT | + |
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Preference number: 5 (lower is better) Translates to: FLVTPNRNTLNERSSEQKEQKFT*MYSIFR Trigger: ACGGAAGATGGAATACATCAAAGTGAATTTCTGTTC...CTTCTGTTCAGATGATCTTTCATTCAATGTGTTCCTGTTGGGCGTTACTAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR CAA 90 bp | GTTATTTTCCAGTTTTCCATAGTTTCTAGTAACGCCCAACAGGAACACATTGAAATACAATGTGCTGAGTaGGCACTGAAAAGCAAAACA | + |
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Preference number: 5 (lower is better) Translates to: VIFQFSIVSSNAQQEHIEIQCAE*ALKSKT Trigger: TGTTTTGCTTTTCAGTGCCAACTCAGCACATTGTAT...TTCAATGTGTTCCTGTTGGGCGTTACTAGAAACTATGGAAAACTGGAAAATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS-3UTR CAA 90 bp | AATCTGGGAAAACTTGAACAGAAATTCACTTTGATGTATTCCATCTTCCGTTTCCCCAACAGGAACACATaGAATGAAAGATCATCTGAA | + |
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Preference number: 5 (lower is better) Translates to: NLGKLEQKFTLMYSIFRFPNRNT*NERSSE Trigger: TTCAGATGATCTTTCATTCAATGTGTTCCTGTTGGG...GAAACGGAAGATGGAATACATCAAAGTGAATTTCTGTTCAAGTTTTCCCAGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS GCA 72 bp | CTGCTGGAGCCCGCGCGGGGCTCGGTTGAGCGTTCTTaGGCGCCTTCTTCCCAGGCATCTCCGCCGGTGCCG | + |
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Preference number: 6 (lower is better) Translates to: LLEPARGSVERS*APSSQASPPVP Trigger: CGGCACCGGCGGAGATGCCTGGGAAGAAGGCGCGCAAGAACGCTCAACCGAGCCCCGCGCGGGCTCCAGCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000269518.9 ENST00000316660.7 ENST00000590596.1 |
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| CDS CAA 90 bp | AGCACACTCGACTTCCAGCTCTGCTGGAGCCCGCGCGGGGCTCGGTaGAGCGTTCTTGCGCGCCTTCTTCCCAGGCATCTCCGCCGGTGC | + |
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Preference number: 6 (lower is better) Translates to: STLDFQLCWSPRGAR*SVLARLLPRHLRRC Trigger: GCACCGGCGGAGATGCCTGGGAAGAAGGCGCGCAAGAACGCTCAACCGAGCCCCGCGCGGGCTCCAGCAGAGCTGGAAGTCGAGTGTGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316660.7 |
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| CDS GCA 72 bp | GTTCTTGCGCGCCTTCTTCCCAGGCATCTCCGCCGGTaGCGCCGCCCACTCAGCTACAGAGCCCGGGAACCT | + |
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Preference number: 6 (lower is better) Translates to: VLARLLPRHLRR*RRPLSYRAREP Trigger: AGGTTCCCGGGCTCTGTAGCTGAGTGGGCGGCGGCACCGGCGGAGATGCCTGGGAAGAAGGCGCGCAAGAAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000269518.9 ENST00000316660.7 ENST00000590596.1 |
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| CDS TCA 72 bp | ACTTCCAGCTCTGCTGGAGCCCGCGCGGGGCTCGGTTaGGCGTTCTTGCGCGCCTTCTTCCCAGGCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: TSSSAGARAGLG*AFLRAFFPGIS Trigger: GGAGATGCCTGGGAAGAAGGCGCGCAAGAACGCTCAACCGAGCCCCGCGCGGGCTCCAGCAGAGCTGGAAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316660.7 |
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| CDS GCA 72 bp | GCGCTGGGAGTCCAGGCGGTCCCCGGGGCTCTCTCCTaGCCCTTCTGCCGCGACAATGACTTTCTCCTAGAG | + |
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Preference number: 6 (lower is better) Translates to: ALGVQAVPGALS*PFCRDNDFLLE Trigger: CTCTAGGAGAAAGTCATTGTCGCGGCAGAAGGGGCAGGAGAGAGCCCCGGGGACCGCCTGGACTCCCAGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590596.1 |
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| CDS CAA 72 bp | GGTGAAACGCAGCTGCATCCCAATCGCAAATCCGGCTaGGTCCCTCGCCGTACCCGCCGTACCCGCCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: GETQLHPNRKSG*VPRRTRRTRRS Trigger: GGACCGGCGGGTACGGCGGGTACGGCGAGGGACCAAGCCGGATTTGCGATTGGGATGCAGCTGCGTTTCACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000590596.1 |
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| CDS CAA 72 bp | GACTTCCAGCTCTGCTGGAGCCCGCGCGGGGCTCGGTaGAGCGTTCTTGCGCGCCTTCTTCCCAGGCATCTC | + |
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Preference number: 6 (lower is better) Translates to: DFQLCWSPRGAR*SVLARLLPRHL Trigger: GAGATGCCTGGGAAGAAGGCGCGCAAGAACGCTCAACCGAGCCCCGCGCGGGCTCCAGCAGAGCTGGAAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000316660.7 |
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| CDS CAA 90 bp | TTTGCCCCTGGTGAAACGCAGCTGCATCCCAATCGCAAATCCGGCTaGGTCCCTCGCCGTACCCGCCGTACCCGCCGGTCCTGCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: FAPGETQLHPNRKSG*VPRRTRRTRRSCWS Trigger: GCTCCAGCAGGACCGGCGGGTACGGCGGGTACGGCGAGGGACCAAGCCGGATTTGCGATTGGGATGCAGCTGCGTTTCACCAGGGGCAAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000590596.1 |
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| CDS GCA 72 bp | GACAGCTGCAGGACGCGAGCTGAACACGAACAGTCCTaGAGGCAGGGATGCTGGGATCGGGTGTCCGGACGC | + |
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Preference number: 6 (lower is better) Translates to: DSCRTRAEHEQS*RQGCWDRVSGR Trigger: GCGTCCGGACACCCGATCCCAGCATCCCTGCCTGCAGGACTGTTCGTGTTCAGCTCGCGTCCTGCAGCTGTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000269518.9 ENST00000316660.7 ENST00000590596.1 |
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| CDS CCA 72 bp | CGAGCTGAACACGAACAGTCCTGCAGGCAGGGATGCTaGGATCGGGTGTCCGGACGCGCGGAGATGCCAACT | + |
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Preference number: 6 (lower is better) Translates to: RAEHEQSCRQGC*DRVSGRAEMPT Trigger: AGTTGGCATCTCCGCGCGTCCGGACACCCGATCCCAGCATCCCTGCCTGCAGGACTGTTCGTGTTCAGCTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000316660.7 |
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| CDS GCA 72 bp | GGAACCTCAGCCTCCAACTGGAGCACCTCGGACAGCTaGAGGACGCGAGCTGAACACGAACAGTCCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GTSASNWSTSDS*RTRAEHEQSCR Trigger: CCTGCAGGACTGTTCGTGTTCAGCTCGCGTCCTGCAGCTGTCCGAGGTGCTCCAGTTGGAGGCTGAGGTTCC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000269518.9 ENST00000316660.7 ENST00000590596.1 |
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| CDS CCA 72 bp | ACTCAGCTACAGAGCCCGGGAACCTCAGCCTCCAACTaGAGCACCTCGGACAGCTGCAGGACGCGAGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: TQLQSPGTSASN*STSDSCRTRAE Trigger: TTCAGCTCGCGTCCTGCAGCTGTCCGAGGTGCTCCAGTTGGAGGCTGAGGTTCCCGGGCTCTGTAGCTGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000269518.9 ENST00000316660.7 ENST00000590596.1 |
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| CDS CCA 72 bp | CTAGAGACAGCCGCCTACACTTGCACTTGTTCCTCGTaGCCCCGGGGAAGGGCAAGTGGCGAGGAGGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: LETAAYTCTCSS*PRGRASGEEER Trigger: TCTTTCCTCCTCGCCACTTGCCCTTCCCCGGGGCCACGAGGAACAAGTGCAAGTGTAGGCGGCTGTCTCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590596.1 |
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| CDS CCA 72 bp | CACACTCGACTTCCAGCTACTTGCACTTGTTCCTCGTaGCCCCGGGGAAGGGCAAGTGGCGAGGAGGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: HTRLPATCTCSS*PRGRASGEEER Trigger: TCTTTCCTCCTCGCCACTTGCCCTTCCCCGGGGCCACGAGGAACAAGTGCAAGTAGCTGGAAGTCGAGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000269518.9 |
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| CDS GCA 72 bp | GAGGAAAGGAGCTTTTTGCCCCTGGTGAAACGCAGCTaGATCCCAATCGCAAATCCGGCTTGGTCCCTCGCC | + |
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Preference number: 6 (lower is better) Translates to: EERSFLPLVKRS*IPIANPAWSLA Trigger: GGCGAGGGACCAAGCCGGATTTGCGATTGGGATGCAGCTGCGTTTCACCAGGGGCAAAAAGCTCCTTTCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000269518.9 ENST00000590596.1 |
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| CDS CAA 90 bp | CAGAAGTTTCTGCCGGAAGTTCAGTTTGTCTCCAAATCTCCTGAGTaGAGTAGCACACTCGACTTCCAGCTCTGCTGGAGCCCGCGCGGG | + |
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Preference number: 6 (lower is better) Translates to: QKFLPEVQFVSKSPE*SSTLDFQLCWSPRG Trigger: CCCGCGCGGGCTCCAGCAGAGCTGGAAGTCGAGTGTGCTACTCAACTCAGGAGATTTGGAGACAAACTGAACTTCCGGCAGAAACTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000316660.7 |
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| CDS CAA 90 bp | CAGAAGTTTCTGCCGGAAGTTCAGTTTGTCTCCAAATCTCCTGAGTaGAGTAGCACACTCGACTTCCAGCTACTTGCACTTGTTCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: QKFLPEVQFVSKSPE*SSTLDFQLLALVPR Trigger: ACGAGGAACAAGTGCAAGTAGCTGGAAGTCGAGTGTGCTACTCAACTCAGGAGATTTGGAGACAAACTGAACTTCCGGCAGAAACTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000269518.9 |
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| CDS CAA 90 bp | CAGAAGTTTCTGCCGGAAGTTCAGTTTGTCTCCAAATCTCCTGAGTaGAGTAGCACACTCGACTTCCAGCTAAGATTTTCTAGGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: QKFLPEVQFVSKSPE*SSTLDFQLRFSRLL Trigger: CAGGAGCCTAGAAAATCTTAGCTGGAAGTCGAGTGTGCTACTCAACTCAGGAGATTTGGAGACAAACTGAACTTCCGGCAGAAACTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590596.1 |
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