RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLXND1 (Homo sapiens)

Ensembl gene IDs: ENSG00000004399

Ensembl transcript IDs: ENST00000324093.9, ENST00000501038.6, ENST00000503166.1, ENST00000504524.5, ENST00000504689.1, ENST00000504767.5, ENST00000504979.1, ENST00000505237.2, ENST00000505505.1, ENST00000505665.5, ENST00000506979.1, ENST00000508630.1, ENST00000511018.1, ENST00000512744.5, ENST00000512807.1, ENST00000514990.1, ENST00000515191.1

Found 782 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGGCTGCAGCCTCCGGGCTGGCGGCCTCCTCTCCCCCAGTTTGTaGTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAAC +
Preference number: 1 (lower is better)
Translates to: LGCSLRAGGLLSPSL*LAAWMHGALGSRTN
Trigger: GTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGAGGCTGCAGCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CCA 90 bp GCTGCAGCCTCCGGGCTGGCGGCCTCCTCTCCCCCAGTTTGTGCTTaGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGA +
Preference number: 1 (lower is better)
Translates to: AAASGLAASSPPVCA*PPGCTGLLAAGPTG
Trigger: TCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGAGGCTGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CCA 90 bp CTCCGGGCTGGCGGCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTaGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGG +
Preference number: 1 (lower is better)
Translates to: LRAGGLLSPSLCLAA*MHGALGSRTNWTLW
Trigger: CCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CCA 90 bp GCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTaGGTGGTAGTCTCAGGCGCCAGGGGCGCTCTGCCAGGTCTGCCC +
Preference number: 1 (lower is better)
Translates to: AWPIGHRGSFLAGTE*VVVSGARGALPGLP
Trigger: GGGCAGACCTGGCAGAGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
3UTR CCA 90 bp CTCCAGCCCCCATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTaGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTT +
Preference number: 1 (lower is better)
Translates to: LQPPWALSQSQHWLS*LRGARMAHRPQRVV
Trigger: AACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCATGGGGGCTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
3UTR GCA 90 bp GGGCTGGCGGCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATaGACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCA +
Preference number: 1 (lower is better)
Translates to: GLAASSPPVCAWPPG*TGLLAAGPTGRCGA
Trigger: TGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CCA 90 bp CCCCTCCACCCTCCCTGCTCCTGGAGAAGCCCACAGAGCACCCCATaGCGCGGGCACTGCCCACTCTACCAACAGCCGCCCAAGCAACAA +
Preference number: 1 (lower is better)
Translates to: PLHPPCSWRSPQSTP*RGHCPLYQQPPKQQ
Trigger: TTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGCGCCATGGGGTGCTCTGTGGGCTTCTCCAGGAGCAGGGAGGGTGGAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CCA 90 bp GCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTaGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTGGGCAGATGG +
Preference number: 1 (lower is better)
Translates to: AWMHGALGSRTNWTL*SKWVGTVQAVLGRW
Trigger: CCATCTGCCCAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CCA 90 bp TGCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTaGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTG +
Preference number: 1 (lower is better)
Translates to: CLAAWMHGALGSRTN*TLWSKWVGTVQAVL
Trigger: CAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CCA 90 bp TGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATaGGGAGCCTCTCGGGACCCCTCCCCGGGTCCTCTGCGCAAGCGG +
Preference number: 1 (lower is better)
Translates to: CQVCPLSGTVISSVA*GASRDPSPGPLRKR
Trigger: CCGCTTGCGCAGAGGACCCGGGGAGGGGTCCCGAGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
3UTR GCA 90 bp AGGAGGGCTCCCTGCACCAGTGTGGATGAGGTAGAGTTTCTGGGCTaGAGCCTCCGGGCTGGCGGCCTCCTCTCCCCCAGTTTGTGCTTG +
Preference number: 1 (lower is better)
Translates to: RRAPCTSVDEVEFLG*SLRAGGLLSPSLCL
Trigger: CAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGAGGCTGCAGCCCAGAAACTCTACCTCATCCACACTGGTGCAGGGAGCCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CCA 90 bp CCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTaGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCAC +
Preference number: 1 (lower is better)
Translates to: PLPQFVLGRLDARGS*QQDQLDVVEQVGGH
Trigger: GTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CCA 90 bp GTAGTCTCAGGCGCCAGGGGCGCTCTGCCAGGTCTGCCCGCTCTCTaGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCGGGACCC +
Preference number: 1 (lower is better)
Translates to: VVSGARGALPGLPAL*NSHFQCCMGSLSGP
Trigger: GGGTCCCGAGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCAGAGCGCCCCTGGCGCCTGAGACTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
3UTR CCA 90 bp TTGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTGGGCAGATaGGGGAGCCTGACCAGCTCTCTGGCCTCCATCCCAGAGACTGAT +
Preference number: 1 (lower is better)
Translates to: LWSKWVGTVQAVLGR*GSLTSSLASIPETD
Trigger: ATCAGTCTCTGGGATGGAGGCCAGAGAGCTGGTCAGGCTCCCCCATCTGCCCAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR TCA 90 bp CCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCACCAGTGTGGATaGGGTAGAGTTTCTGGGCTGCAGCCTCCGGGCTGGCGGCCTCCT +
Preference number: 1 (lower is better)
Translates to: PIKGQFKEGSLHQCG*GRVSGLQPPGWRPP
Trigger: AGGAGGCCGCCAGCCCGGAGGCTGCAGCCCAGAAACTCTACCTCATCCACACTGGTGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR GCA 90 bp CCCTGCTCCTGGAGAAGCCCACAGAGCACCCCATGGCGCGGGCACTaGCCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTGACACT +
Preference number: 1 (lower is better)
Translates to: PCSWRSPQSTPWRGH*PLYQQPPKQQKSDT
Trigger: AGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGCGCCATGGGGTGCTCTGTGGGCTTCTCCAGGAGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR TCA 90 bp ATTTCCTCGACTCCTCGGCCAGATGGGCATTCATCTCTTGCTCGCTaGGCGGCGTCATGTCCTGGATCTGCTTGTAGTAGCGCTGCACGA +
Preference number: 1 (lower is better)
Translates to: ISSTPRPDGHSSLAR*AASCPGSACSSAAR
Trigger: TCGTGCAGCGCTACTACAAGCAGATCCAGGACATGACGCCGCTCAGCGAGCAAGAGATGAATGCCCATCTGGCCGAGGAGTCGAGGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512744.5
3UTR CCA 90 bp AGTCTGAGTCACAGGCACGGGGTAGAAGATCAAGTTGAGGCCCAGTaGGCGTCCATTTCTCCCAGCAGCAGCCTGACCAACTCTCCATGT +
Preference number: 1 (lower is better)
Translates to: SLSHRHGVEDQVEAQ*ASISPSSSLTNSPC
Trigger: ACATGGAGAGTTGGTCAGGCTGCTGCTGGGAGAAATGGACGCCCACTGGGCCTCAACTTGATCTTCTACCCCGTGCCTGTGACTCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR TCA 90 bp AGTATTTCCCAGTCTGAGTCACAGGCACGGGGTAGAAGATCAAGTTaGGGCCCAGTGGGCGTCCATTTCTCCCAGCAGCAGCCTGACCAA +
Preference number: 1 (lower is better)
Translates to: SISQSESQARGRRSS*GPVGVHFSQQQPDQ
Trigger: TTGGTCAGGCTGCTGCTGGGAGAAATGGACGCCCACTGGGCCTCAACTTGATCTTCTACCCCGTGCCTGTGACTCAGACTGGGAAATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR TCA 90 bp CCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTGACACTACTTaGAACTGTCTGTGGCCAGGATCCTCTACGGGTGAGGGGGAAGTG +
Preference number: 1 (lower is better)
Translates to: PLYQQPPKQQKSDTT*NCLWPGSSTGEGEV
Trigger: CACTTCCCCCTCACCCGTAGAGGATCCTGGCCACAGACAGTTTCAAGTAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR GCA 90 bp GGCCATGATCTGCGGCCGATACCTCTTGGCGTACTTATAAATCTCTaGCATGGCCACATTGGTGTTGAACTCATTCTGGTATTTCCTCGA +
Preference number: 1 (lower is better)
Translates to: GHDLRPIPLGVLINL*HGHIGVELILVFPR
Trigger: TCGAGGAAATACCAGAATGAGTTCAACACCAATGTGGCCATGGCAGAGATTTATAAGTACGCCAAGAGGTATCGGCCGCAGATCATGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512744.5
3UTR CAA 90 bp GGCTGCAGCCTCCGGGCTGGCGGCCTCCTCTCCCCCAGTTTGTGCTaGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGG +
Preference number: 2 (lower is better)
Translates to: GCSLRAGGLLSPSLC*AAWMHGALGSRTNW
Trigger: CCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGAGGCTGCAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CAA 90 bp TTTCTGGGCTGCAGCCTCCGGGCTGGCGGCCTCCTCTCCCCCAGTTaGTGCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACC +
Preference number: 2 (lower is better)
Translates to: FLGCSLRAGGLLSPS*CLAAWMHGALGSRT
Trigger: GGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGAGGCTGCAGCCCAGAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CAA 90 bp GCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTaGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: AAWMHGALGSRTNWT*WSKWVGTVQAVLGR
Trigger: TCTGCCCAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR-3UTR TCA 90 bp CAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCAGGCCTGCGCGATGACTaGAAGGCAGGCGTCGATGTG +
Preference number: 2 (lower is better)
Translates to: QSQHWLSWLRGARMAHRPGLRDD*KAGVDV
Trigger: CACATCGACGCCTGCCTTTCAGTCATCGCGCAGGCC...TGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512744.5
3UTR-3UTR GCA 90 bp TGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCACAGTGCAGGCCGTaGTGGGCAGATGGGGGAGCC +
Preference number: 2 (lower is better)
Translates to: WPPGCTGLLAAGPTGRCGAQCRP*WADGGA
Trigger: GGCTCCCCCATCTGCCCAGCACGGCCTGCACTGTGC...TCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR-3UTR CCA 90 bp GGCGGCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTCACCCTCCCTGCTCCTaGAGAAGCCCACAGAGCACC +
Preference number: 2 (lower is better)
Translates to: GGLLSPSLCLAAWMHGALHPPCS*RSPQST
Trigger: GGTGCTCTGTGGGCTTCTCCAGGAGCAGGGAGGGTG...AAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR-3UTR TCA 90 bp ACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCTCCATCCCAGAGACTaGTCTGGGGACAGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: TLAELAARGPHGPSATEGLHPRD*SGDRWE
Trigger: CTCCCACCTGTCCCCAGATCAGTCTCTGGGATGGAG...ACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR-3UTR TCA 90 bp GGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTGGGCAGATGGGGGAGCCTaGCCAGCTCTCTGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: GPTGRCGASGWAQCRPCWADGGA*PALWPP
Trigger: TGGAGGCCAGAGAGCTGGTCAGGCTCCCCCATCTGC...CCAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR-3UTR GCA 90 bp CCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGAGTGGGTGGGCACAGTaGAGGCCGTGCTGGGCAGAT +
Preference number: 2 (lower is better)
Translates to: PPLPQFVLGRLDARGSWQSGWAQ*RPCWAD
Trigger: ATCTGCCCAGCACGGCCTGCACTGTGCCCACCCACT...CTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR-3UTR GCA 90 bp CACAGAGCACCCCATGGCGCGGGCACTGCCCACTCTACCAACAGCCGCCCAAGCCTCTCCCCCAGTTTGTaGTTGGCCGCCTGGATGCAC +
Preference number: 2 (lower is better)
Translates to: HRAPHGAGTAHSTNSRPSLSPSL*LAAWMH
Trigger: GTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAG...GCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGCGCCATGGGGTGCTCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CAA 90 bp ACCTGCTCAAACTTGTGCTGCAGTTGTGTCCTCCGGGCCGTGGGGTaGGCCTCCAGCGCGGCCATGATCTGCGGCCGATACCTCTTGGCG +
Preference number: 2 (lower is better)
Translates to: TCSNLCCSCVLRAVG*ASSAAMICGRYLLA
Trigger: CGCCAAGAGGTATCGGCCGCAGATCATGGCCGCGCTGGAGGCCAACCCCACGGCCCGGAGGACACAACTGCAGCACAAGTTTGAGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512744.5
3UTR-3UTR CCA 90 bp GCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCGGGACCCCACAGAGCACCCCATaGCGCGGGCACTGCCCACTC +
Preference number: 2 (lower is better)
Translates to: ARSLEQSFPVLHGEPLGTPQSTP*RGHCPL
Trigger: GAGTGGGCAGTGCCCGCGCCATGGGGTGCTCTGTGG...GGTCCCGAGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CAA 90 bp TCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTaGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: SSPPVCAWPPGCTGL*AAGPTGRCGASGWA
Trigger: TGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR-3UTR TCA 90 bp CTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGGCAGATGGGGGAGCCTaGCCAGCTCTCTGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: LGSRTNWTLWSKWVGTVQADGGA*PALWPP
Trigger: TGGAGGCCAGAGAGCTGGTCAGGCTCCCCCATCTGC...CTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR-3UTR GCA 90 bp AGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCGCGTCGATGAAGGCCTaGGCGATGACTGAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: RVVSGRNGVGGSLRRQGRASMKA*AMTERQ
Trigger: CTGCCTTTCAGTCATCGCGCAGGCCTTCATCGACGC...GCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512744.5
3UTR-3UTR CCA 90 bp CCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGGCAGCAGGACCAACTaGACGTTGTGGAGCAAGTGG +
Preference number: 2 (lower is better)
Translates to: PAWPIGHRGSFLAGTEWVGSRTN*TLWSKW
Trigger: CCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCC...CACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR-3UTR TCA 90 bp CAGCCCCCATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGGTAGAAGATCAAGTTaGGGCCCAGTGGGCGTCCAT +
Preference number: 2 (lower is better)
Translates to: QPPWALSQSQHWLSWLRGGRRSS*GPVGVH
Trigger: ATGGACGCCCACTGGGCCTCAACTTGATCTTCTACC...CCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCATGGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR-3UTR GCA 90 bp ACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTAGTCATTTCCAGTGTTaGATGGGGAGCCTCTCGGGA +
Preference number: 2 (lower is better)
Translates to: TLAELAARGPHGPSATEGSHFQC*MGSLSG
Trigger: TCCCGAGAGGCTCCCCATGCAACACTGGAAATGACT...ACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
3UTR-3UTR CCA 90 bp CTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTGGGCAGATGCAAGTTGAGGCCCAGTaGGCGTCCATTTCTCCCAGC +
Preference number: 2 (lower is better)
Translates to: LDVVEQVGGHSAGRAGQMQVEAQ*ASISPS
Trigger: GCTGGGAGAAATGGACGCCCACTGGGCCTCAACTTG...CATCTGCCCAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR-3UTR CCA 90 bp GGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTGGCAAGTTGAGGCCCAGTaGGCGTCCATTTCTCCCAGC +
Preference number: 2 (lower is better)
Translates to: GPTGRCGASGWAQCRPCWQVEAQ*ASISPS
Trigger: GCTGGGAGAAATGGACGCCCACTGGGCCTCAACTTG...CCAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CAA 90 bp GTTGTCCTCCATCAAAGCCACCACCTGCTCAAACTTGTGCTGCAGTaGTGTCCTCCGGGCCGTGGGGTTGGCCTCCAGCGCGGCCATGAT +
Preference number: 2 (lower is better)
Translates to: VVLHQSHHLLKLVLQ*CPPGRGVGLQRGHD
Trigger: ATCATGGCCGCGCTGGAGGCCAACCCCACGGCCCGGAGGACACAACTGCAGCACAAGTTTGAGCAGGTGGTGGCTTTGATGGAGGACAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512744.5
3UTR-3UTR GCA 90 bp TGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGCAGCTACAGCCTCGGTaGATCTTAACCCCTCTCCTT +
Preference number: 2 (lower is better)
Translates to: WALSQSQHWLSWLRGARMQLQPR*ILTPLL
Trigger: AAGGAGAGGGGTTAAGATGCACCGAGGCTGTAGCTG...CATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR-3UTR GCA 90 bp CAGCCCCCATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGAGTCATTTCCAGTGTTaGATGGGGAGCCTCTCGGGA +
Preference number: 2 (lower is better)
Translates to: QPPWALSQSQHWLSWLRGSHFQC*MGSLSG
Trigger: TCCCGAGAGGCTCCCCATGCAACACTGGAAATGACT...CCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCATGGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
3UTR-3UTR GCA 90 bp GGGCACTGCCCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTGACACTACTGCGCCAGGGGCGCTCTaGCAGGTCTGCCCGCTCTCT +
Preference number: 2 (lower is better)
Translates to: GHCPLYQQPPKQQKSDTTAPGAL*QVCPLS
Trigger: AGAGAGCGGGCAGACCTGGCAGAGCGCCCCTGGCGC...AGTAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR-3UTR GCA 90 bp GCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCGGGACCCGCCCCAGCCGTCTCTaGTCAGTATTTCCCAGTCTG +
Preference number: 2 (lower is better)
Translates to: ARSLEQSFPVLHGEPLGTRPSRL*SVFPSL
Trigger: CAGACTGGGAAATACTGAGCAGAGACGGCTGGGGCG...GGTCCCGAGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR-3UTR CCA 90 bp TGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGACGTAGAGGAGCTTGTTaGTTGGCGAATCCTTGCCCA +
Preference number: 2 (lower is better)
Translates to: WPPGCTGLLAAGPTGRCGRRGAC*LANPCP
Trigger: TGGGCAAGGATTCGCCAACCAACAAGCTCCTCTACG...TCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512744.5
3UTR-3UTR GCA 90 bp GGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAACCTGCTCAAACTTGTaGTGCAGTTGTGTCCTCCGG +
Preference number: 2 (lower is better)
Translates to: GALGSRTNWTLWSKWVGTTCSNL*CSCVLR
Trigger: CCGGAGGACACAACTGCAGCACAAGTTTGAGCAGGT...TGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512744.5
3UTR-3UTR CCA 90 bp CGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACACTCAGGAATCTCCTTaGCGTAGAGGAGCTTGTTGG +
Preference number: 2 (lower is better)
Translates to: RGSWQQDQLDVVEQVGGHTQESP*RRGACW
Trigger: CCAACAAGCTCCTCTACGCCAAGGAGATTCCTGAGT...GTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512744.5
3UTR-3UTR GCA 90 bp GCGGGCACTGCCCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTGACACTACTCTCCCCCAGTTTGTaGTTGGCCGCCTGGATGCAC +
Preference number: 2 (lower is better)
Translates to: AGTAHSTNSRPSNKNLTLLSPSL*LAAWMH
Trigger: GTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAG...TAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR-3UTR GCA 90 bp AGAAACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCACCAGTGTGGATGAGCCCCTCCACCCTCCCTaGTCCTGGAGAAGCCCACAG +
Preference number: 2 (lower is better)
Translates to: RNQSKVSSRRAPCTSVDEPLHPP*SWRSPQ
Trigger: CTGTGGGCTTCTCCAGGAGCAGGGAGGGTGGAGGGG...CTCATCCACACTGGTGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR-3UTR GCA 90 bp CCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTGGTTGGCGAATCCTTaGCCAGCTGCAGGTCAGAGA +
Preference number: 2 (lower is better)
Translates to: PGLPALWNSHFQCCMGSLWLANP*PAAGQR
Trigger: TCTCTGACCTGCAGCTGGGCAAGGATTCGCCAACCA...GAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512744.5
3UTR-3UTR CCA 90 bp GGGCACTGCCCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTGACACTACTGATGCACGGGGCTCTTaGCAGCAGGACCAACTGGAC +
Preference number: 2 (lower is better)
Translates to: GHCPLYQQPPKQQKSDTTDARGS*QQDQLD
Trigger: GTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATC...AGTAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR-3UTR CCA 90 bp AACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCACCAGTGTGGATGAGGTATTGTGCTTGGCCGCCTaGATGCACGGGGCTCTTGGC +
Preference number: 2 (lower is better)
Translates to: NQSKVSSRRAPCTSVDEVLCLAA*MHGALG
Trigger: GCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAA...TACCTCATCCACACTGGTGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CAA 90 bp ATTCTGGTATTTCCTCGACTCCTCGGCCAGATGGGCATTCATCTCTaGCTCGCTGAGCGGCGTCATGTCCTGGATCTGCTTGTAGTAGCG +
Preference number: 2 (lower is better)
Translates to: ILVFPRLLGQMGIHL*LAERRHVLDLLVVA
Trigger: CGCTACTACAAGCAGATCCAGGACATGACGCCGCTCAGCGAGCAAGAGATGAATGCCCATCTGGCCGAGGAGTCGAGGAAATACCAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512744.5
3UTR-3UTR TCA 90 bp TCTCCATGTGTCTCAGGCCTCACTGTAGCACTCGTAGATGTTGTCCTCCATCAATCATCTCTTGCTCGCTaGGCGGCGTCATGTCCTGGA +
Preference number: 2 (lower is better)
Translates to: SPCVSGLTVALVDVVLHQSSLAR*AASCPG
Trigger: TCCAGGACATGACGCCGCTCAGCGAGCAAGAGATGA...TTGATGGAGGACAACATCTACGAGTGCTACAGTGAGGCCTGAGACACATGGAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512744.5
3UTR-3UTR GCA 90 bp GCCACCACCTGCTCAAACTTGTGCTGCAGTTGTGTCCTCCGGGCCGTGGGGTTGGTACTTATAAATCTCTaGCATGGCCACATTGGTGTT +
Preference number: 2 (lower is better)
Translates to: ATTCSNLCCSCVLRAVGLVLINL*HGHIGV
Trigger: AACACCAATGTGGCCATGGCAGAGATTTATAAGTAC...CAACCCCACGGCCCGGAGGACACAACTGCAGCACAAGTTTGAGCAGGTGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512744.5
3UTR-3UTR GCA 90 bp AGTGGAGATAACATTTTGGTAGTTGAAGCAGAAACCAATCAAAGGTCAGTTCAACCCCTCCACCCTCCCTaGTCCTGGAGAAGCCCACAG +
Preference number: 2 (lower is better)
Translates to: SGDNILVVEAETNQRSVQPLHPP*SWRSPQ
Trigger: CTGTGGGCTTCTCCAGGAGCAGGGAGGGTGGAGGGG...TTGAACTGACCTTTGATTGGTTTCTGCTTCAACTACCAAAATGTTATCTCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR-3UTR CCA 90 bp AGTGGAGATAACATTTTGGTAGTTGAAGCAGAAACCAATCAAAGGTCAGTTCAACCCCCAGTTTGTGCTTaGCCGCCTGGATGCACGGGG +
Preference number: 2 (lower is better)
Translates to: SGDNILVVEAETNQRSVQPPVCA*PPGCTG
Trigger: CCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGG...TTGAACTGACCTTTGATTGGTTTCTGCTTCAACTACCAAAATGTTATCTCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR GCA 72 bp AGCCTCCGGGCTGGCGGCCTCCTCTCCCCCAGTTTGTaGTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGC +
Preference number: 3 (lower is better)
Translates to: SLRAGGLLSPSL*LAAWMHGALGS
Trigger: GCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGAGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CCA 72 bp TCCGGGCTGGCGGCCTCCTCTCCCCCAGTTTGTGCTTaGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGA +
Preference number: 3 (lower is better)
Translates to: SGLAASSPPVCA*PPGCTGLLAAG
Trigger: TCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CCA 72 bp CCTCCCTGCTCCTGGAGAAGCCCACAGAGCACCCCATaGCGCGGGCACTGCCCACTCTACCAACAGCCGCCC +
Preference number: 3 (lower is better)
Translates to: PPCSWRSPQSTP*RGHCPLYQQPP
Trigger: GGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGCGCCATGGGGTGCTCTGTGGGCTTCTCCAGGAGCAGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CCA 72 bp GGCGGCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTaGATGCACGGGGCTCTTGGCAGCAGGACCAACTGG +
Preference number: 3 (lower is better)
Translates to: GGLLSPSLCLAA*MHGALGSRTNW
Trigger: CCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CCA 72 bp CCATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTaGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAG +
Preference number: 3 (lower is better)
Translates to: PWALSQSQHWLS*LRGARMAHRPQ
Trigger: CTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
3UTR CCA 72 bp CTCCAGCCCCCATGGGCTCTGAGCCAGTCCCAACACTaGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCAT +
Preference number: 3 (lower is better)
Translates to: LQPPWALSQSQH*LSWLRGARMAH
Trigger: ATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCATGGGGGCTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
3UTR-3UTR CAA 90 bp TGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGCTCCTCTCCCCCAGTTaGTGCTTGGCCGCCTGGATG +
Preference number: 3 (lower is better)
Translates to: WALSQSQHWLSWLRGARMLLSPS*CLAAWM
Trigger: CATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAG...CATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR GCA 72 bp GCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATaGACGGGGCTCTTGGCAGCAGGACCAACTGGACGT +
Preference number: 3 (lower is better)
Translates to: ASSPPVCAWPPG*TGLLAAGPTGR
Trigger: ACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CCA 72 bp CACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTaGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTG +
Preference number: 3 (lower is better)
Translates to: HGALGSRTNWTL*SKWVGTVQAVL
Trigger: CAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CCA 72 bp GGCGCCAGGGGCGCTCTGCCAGGTCTGCCCGCTCTCTaGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTC +
Preference number: 3 (lower is better)
Translates to: GARGALPGLPAL*NSHFQCCMGSL
Trigger: GAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCAGAGCGCCCCTGGCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
3UTR CCA 72 bp ATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTaGGTGGTAGTCTCAGGCGCCAGGGGCGCTCTGCCA +
Preference number: 3 (lower is better)
Translates to: IGHRGSFLAGTE*VVVSGARGALP
Trigger: TGGCAGAGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
3UTR-3UTR CAA 90 bp GGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCTTGGTTGGCGAATCCTaGCCCAGCTGCAGGTCAGAG +
Preference number: 3 (lower is better)
Translates to: GSEPVPTLAELAARGPHGLVGES*PSCRSE
Trigger: CTCTGACCTGCAGCTGGGCAAGGATTCGCCAACCAA...GCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512744.5
3UTR CCA 72 bp GCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTaGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAG +
Preference number: 3 (lower is better)
Translates to: AWMHGALGSRTN*TLWSKWVGTVQ
Trigger: CTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CCA 72 bp TGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATaGGGAGCCTCTCGGGACCCCTCCCCGGGTCCTCTG +
Preference number: 3 (lower is better)
Translates to: CPLSGTVISSVA*GASRDPSPGPL
Trigger: CAGAGGACCCGGGGAGGGGTCCCGAGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
3UTR-3UTR CAA 90 bp AACTTGTGCTGCAGTTGTGTCCTCCGGGCCGTGGGGTTGGCCTCCAGCGCGGCCTCTGCCATGGCCACATaGGTGTTGAACTCATTCTGG +
Preference number: 3 (lower is better)
Translates to: NLCCSCVLRAVGLASSAASAMAT*VLNSFW
Trigger: CCAGAATGAGTTCAACACCAATGTGGCCATGGCAGA...GGCCGCGCTGGAGGCCAACCCCACGGCCCGGAGGACACAACTGCAGCACAAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512744.5
3UTR GCA 72 bp TGGAGAAGCCCACAGAGCACCCCATGGCGCGGGCACTaGCCACTCTACCAACAGCCGCCCAAGCAACAAAAA +
Preference number: 3 (lower is better)
Translates to: WRSPQSTPWRGH*PLYQQPPKQQK
Trigger: TTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGCGCCATGGGGTGCTCTGTGGGCTTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR GCA 72 bp TCCTCCATCAAAGCCACCACCTGCTCAAACTTGTGCTaGAGTTGTGTCCTCCGGGCCGTGGGGTTGGCCTCC +
Preference number: 3 (lower is better)
Translates to: SSIKATTCSNLC*SCVLRAVGLAS
Trigger: GGAGGCCAACCCCACGGCCCGGAGGACACAACTGCAGCACAAGTTTGAGCAGGTGGTGGCTTTGATGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512744.5
3UTR CCA 72 bp CAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTaGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTG +
Preference number: 3 (lower is better)
Translates to: QFVLGRLDARGS*QQDQLDVVEQV
Trigger: CACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR GCA 72 bp TTGTCCTCCATCAAAGCCACCACCTGCTCAAACTTGTaGTGCAGTTGTGTCCTCCGGGCCGTGGGGTTGGCC +
Preference number: 3 (lower is better)
Translates to: LSSIKATTCSNL*CSCVLRAVGLA
Trigger: GGCCAACCCCACGGCCCGGAGGACACAACTGCAGCACAAGTTTGAGCAGGTGGTGGCTTTGATGGAGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512744.5
3UTR CCA 72 bp CACAGGCACGGGGTAGAAGATCAAGTTGAGGCCCAGTaGGCGTCCATTTCTCCCAGCAGCAGCCTGACCAAC +
Preference number: 3 (lower is better)
Translates to: HRHGVEDQVEAQ*ASISPSSSLTN
Trigger: GTTGGTCAGGCTGCTGCTGGGAGAAATGGACGCCCACTGGGCCTCAACTTGATCTTCTACCCCGTGCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR TCA 72 bp CAGTCTGAGTCACAGGCACGGGGTAGAAGATCAAGTTaGGGCCCAGTGGGCGTCCATTTCTCCCAGCAGCAG +
Preference number: 3 (lower is better)
Translates to: QSESQARGRRSS*GPVGVHFSQQQ
Trigger: CTGCTGCTGGGAGAAATGGACGCCCACTGGGCCTCAACTTGATCTTCTACCCCGTGCCTGTGACTCAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR GCA 72 bp CAGGCAGCTGGTACAGGCTGTGTGGGGGTACACTTGTaGAGTGCGGCTGCAGTCGTAGATGGTGAAATTGGC +
Preference number: 3 (lower is better)
Translates to: QAAGTGCVGVHL*SAAAVVDGEIG
Trigger: GCCAATTTCACCATCTACGACTGCAGCCGCACTGCACAAGTGTACCCCCACACAGCCTGTACCAGCTGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505665.5
3UTR GCA 72 bp TTCCTCGACTCCTCGGCCAGATGGGCATTCATCTCTTaGTCGCTGAGCGGCGTCATGTCCTGGATCTGCTTG +
Preference number: 3 (lower is better)
Translates to: FLDSSARWAFIS*SLSGVMSWICL
Trigger: CAAGCAGATCCAGGACATGACGCCGCTCAGCGAGCAAGAGATGAATGCCCATCTGGCCGAGGAGTCGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512744.5
3UTR TCA 72 bp ACTCCTCGGCCAGATGGGCATTCATCTCTTGCTCGCTaGGCGGCGTCATGTCCTGGATCTGCTTGTAGTAGC +
Preference number: 3 (lower is better)
Translates to: TPRPDGHSSLAR*AASCPGSACSS
Trigger: GCTACTACAAGCAGATCCAGGACATGACGCCGCTCAGCGAGCAAGAGATGAATGCCCATCTGGCCGAGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512744.5
3UTR CCA 72 bp AGCGCTGCACGATCTTCCGGTACTCAGGAATCTCCTTaGCGTAGAGGAGCTTGTTGGTTGGCGAATCCTTGC +
Preference number: 3 (lower is better)
Translates to: SAARSSGTQESP*RRGACWLANPC
Trigger: GCAAGGATTCGCCAACCAACAAGCTCCTCTACGCCAAGGAGATTCCTGAGTACCGGAAGATCGTGCAGCGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512744.5
3UTR-3UTR CAA 90 bp TGTGTGGGGGTACACTTGTGCAGTGCGGCTGCAGTCGTAGATGGTGAAATTGGCACGATGTTCCGCCCATaGACCCTCACAGACATCTCA +
Preference number: 3 (lower is better)
Translates to: CVGVHLCSAAAVVDGEIGTMFRP*TLTDIS
Trigger: TGAGATGTCTGTGAGGGTCAATGGGCGGAACATCGT...GCCAATTTCACCATCTACGACTGCAGCCGCACTGCACAAGTGTACCCCCACACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505665.5
3UTR GCA 72 bp TTTCAGCAAGATCAAGTAGCCCAGCTACAGCCTCGGTaGATCTTAACCCCTCTCCTTTTCCTGGAGACGGGG +
Preference number: 3 (lower is better)
Translates to: FQQDQVAQLQPR*ILTPLLFLETG
Trigger: CCCCGTCTCCAGGAAAAGGAGAGGGGTTAAGATGCACCGAGGCTGTAGCTGGGCTACTTGATCTTGCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR GCA 72 bp AGAAACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTaGACCAGTGTGGATGAGGTAGAGTTTCTGGGCTGC +
Preference number: 3 (lower is better)
Translates to: RNQSKVSSRRAP*TSVDEVEFLGC
Trigger: GCAGCCCAGAAACTCTACCTCATCCACACTGGTGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR TCA 72 bp CAACAGCCGCCCAAGCAACAAAAATCTGACACTACTTaGAACTGTCTGTGGCCAGGATCCTCTACGGGTGAG +
Preference number: 3 (lower is better)
Translates to: QQPPKQQKSDTT*NCLWPGSSTGE
Trigger: CTCACCCGTAGAGGATCCTGGCCACAGACAGTTTCAAGTAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR TCA 72 bp CCCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTaGCACTACTTGAAACTGTCTGTGGCCAGGATCCTC +
Preference number: 3 (lower is better)
Translates to: PTLPTAAQATKI*HYLKLSVARIL
Trigger: GAGGATCCTGGCCACAGACAGTTTCAAGTAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR GCA 72 bp CTGCGGCCGATACCTCTTGGCGTACTTATAAATCTCTaGCATGGCCACATTGGTGTTGAACTCATTCTGGTA +
Preference number: 3 (lower is better)
Translates to: LRPIPLGVLINL*HGHIGVELILV
Trigger: TACCAGAATGAGTTCAACACCAATGTGGCCATGGCAGAGATTTATAAGTACGCCAAGAGGTATCGGCCGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512744.5
CDS-3UTR TCA 90 bp CAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGCACGGGTGCCAGGGGTaGGAGCAGGGTCCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: QHWLSWLRGARMAHRPQRHGCQG*EQGPGA
Trigger: TGCCCCCGGACCCTGCTCTCACCCCTGGCACCCGTG...CCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp ACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTGGGCCACGTCACTaGGCCGCCGGCCCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: TLAELAARGPHGPSATEGRGPRH*AAGPGS
Trigger: GGAACCTGGGCCGGCGGCTCAGTGACGTGGCCCACG...ACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CACAGAGCACCCCATGGCGCGGGCACTGCCCACTCTACCAACAGCCGCCCAAGCGTGTCCTCCGGGCCGTaGGGTTGGCCTCCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: HRAPHGAGTAHSTNSRPSVSSGP*GWPPAR
Trigger: CCGCGCTGGAGGCCAACCCCACGGCCCGGAGGACAC...GCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGCGCCATGGGGTGCTCTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp ACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTCTGCCAGGTCTGCCCGCTTGCGAGGGGCCCGCATaGCCCATCGGCCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: TEWVVVSGARGALPGLPACEGPA*PIGHRG
Trigger: CCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCA...AGCGGGCAGACCTGGCAGAGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
3UTR CAA 72 bp CTCCGGGCTGGCGGCCTCCTCTCCCCCAGTTTGTGCTaGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LRAGGLLSPSLC*AAWMHGALGSR
Trigger: CCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
3UTR CAA 72 bp TGCAGCCTCCGGGCTGGCGGCCTCCTCTCCCCCAGTTaGTGCTTGGCCGCCTGGATGCACGGGGCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: CSLRAGGLLSPS*CLAAWMHGALG
Trigger: GCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGAGGCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp GGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTGGCAGCTGCGGAGCGTaGCACAGCGGGCTGTCGGGC +
Preference number: 4 (lower is better)
Translates to: GSFLAGTEWVVVSGARGAGSCGA*HSGLSG
Trigger: GCCCGACAGCCCGCTGTGTCACGCTCCGCAGCTGCC...AGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp CAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACGCGCGCCTCGCTGTTaGGCGCCAGGTACGCGTAGG +
Preference number: 4 (lower is better)
Translates to: QSQHWLSWLRGARMAHRPRAPRC*APGTRR
Trigger: CCTACGCGTACCTGGCGCTCAACAGCGAGGCGCGCG...TGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp GGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTGGCCACGGCCACGGAGGTaGGGCCCGGGGCGCGGAACA +
Preference number: 4 (lower is better)
Translates to: GPTGRCGASGWAQCRPCWPRPRR*GPGRGT
Trigger: TGTTCCGCGCCCCGGGCCTCACCTCCGTGGCCGTGG...CCAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp TGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGCGTGGGGCAGGCAGATaGGCGCCAGCAGGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: WALSQSQHWLSWLRGARMRGAGR*APAGSA
Trigger: CGCGGAGCCTGCTGGCGCGCATCTGCCTGCCCCACG...CATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp CAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACCAGGCGGAACCTGCTaGCCCGCTGTGCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: QSQHWLSWLRGARMAHRPPGGTC*PAVPPR
Trigger: CCGAGGAGGCACAGCGGGGCAGCAGGTTCCGCCTGG...TGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp TCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTCTGCCAGGGAGGGGAACCGACGCTaGATCTCCAGGGCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: SGRNGVGGSLRRQGRSAREGNRR*ISRAPA
Trigger: GGCCGGCGCCCTGGAGATCCAGCGTCGGTTCCCCTC...CCTGGCAGAGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp ACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTAGCAGGCTCCGCGCCTaGCTCTCCTTGTCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: TLAELAARGPHGPSATEGSRLRA*LSLSPA
Trigger: CGCGGGCGACAAGGAGAGCCAGGCGCGGAGCCTGCT...ACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CCCCCATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCTGCGCGCAGCTCGGATaGCGGCTCGCACGTCGGCGA +
Preference number: 4 (lower is better)
Translates to: PPWALSQSQHWLSWLRGACAQLG*RLARRR
Trigger: TCGCCGACGTGCGAGCCGCCATCCGAGCTGCGCGCA...GGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCATGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp GCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGCGCGGAACACGGGCGTaGCCTTCAGGGGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: ARGPHGPSATEGRFWQERRGTRA*PSGAAG
Trigger: TCCTGCAGCCCCTGAAGGCCACGCCCGTGTTCCGCG...CCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGATGGCAGGACAGCGGCTaGGGCCCTCGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: RGARMAHRPQRVVSGRNGWQDSG*GPRWHW
Trigger: CCAGTGCCAGCGAGGGCCCCAGCCGCTGTCCTGCCA...TCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGATCGCGGCCCAGGCACTaGGAACAGTCGGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RGARMAHRPQRVVSGRNGSRPRH*EQSGLP
Trigger: GGGCAGCCCCGACTGTTCCCAGTGCCTGGGCCGCGA...TCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGGTGTCCTCCGGGCCGTaGGGTTGGCCTCCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: PPLPQFVLGRLDARGSWQVSSGP*GWPPAR
Trigger: CCGCGCTGGAGGCCAACCCCACGGCCCGGAGGACAC...CTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp ACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTCTGCCAGGTCTGCCCGCTCTGGGGCTGGCCCTGTaGCACACACGATCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: TEWVVVSGARGALPGLPALGLAL*HTRSPP
Trigger: CGGAGGAGATCGTGTGTGTCACAGGGCCAGCCCCAG...AGCGGGCAGACCTGGCAGAGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp CCTCCGGGCTGGCGGCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACGGCCGAGGCGTCAATaGGGTCCACCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PPGWRPPLPQFVLGRLDARPRRQ*GPPAAP
Trigger: AGGAGCTGCTGGTGGACCTCATTGACGCCTCGGCCG...TGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp ACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTCTGCCAGGTCTGCCCGCTAGTCCCAACACTGGCTaGGTTGGCTGCGAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: TEWVVVSGARGALPGLPASPNTG*VGCEGP
Trigger: GGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACT...AGCGGGCAGACCTGGCAGAGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR GCA 90 bp GGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTCTGCCAGGTCTGTACGCGTAGGACTGTaGACCCGGCGGCGGGTCGGA +
Preference number: 4 (lower is better)
Translates to: GRNGVGGSLRRQGRSARSVRVGL*TRRRVG
Trigger: TCCGACCCGCCGCCGGGTGCACAGTCCTACGCGTAC...AGACCTGGCAGAGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp GGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGATCCCCACAGGTGGAGTaGACGTTGCAGGCGGCGACC +
Preference number: 4 (lower is better)
Translates to: GCEGPAWPIGHRGSFLAGSPQVE*TLQAAT
Trigger: GGTCGCCGCCTGCAACGTGCACTCCACCTGTGGGGA...TCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp CCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGCTGGCGCTGATGCGTTaGTCAGGGCCCCGGGGGACG +
Preference number: 4 (lower is better)
Translates to: PAWPIGHRGSFLAGTEWVLALMR*SGPRGT
Trigger: CGTCCCCCGGGGCCCTGAGCAACGCATCAGCGCCAG...CACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp CAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCAATTGTGATGGGCAGCTaGCCCACGGCCGCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QSQHWLSWLRGARMAHRPIVMGS*PTAAPR
Trigger: CCTGGGCGCGGCCGTGGGGCAGCTGCCCATCACAAT...TGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp GGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCACGACTACCAGGCCCTaGCCGGGGTCCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GSEPVPTLAELAARGPHGTTTRP*PGSSCR
Trigger: CCTGCAGCTGGACCCCGGCCAGGGCCTGGTAGTCGT...GCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACGCCGCGGGGGACCCCTaGGGCCGCTCGAAGACAGCA +
Preference number: 4 (lower is better)
Translates to: RGSWQQDQLDVVEQVGGHAAGDP*GRSKTA
Trigger: TGCTGTCTTCGAGCGGCCCCAGGGGTCCCCCGCGGC...GTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp AGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCTGCCGTGCAGCGCGATaGTCAGCAGCGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SWLRGARMAHRPQRVVSGCRAAR*SAARPG
Trigger: GCCTGGCCTCGCTGCTGACCATCGCGCTGCACGGCA...GCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp GGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAGCCGGTGAGACTTCTTaGGCTCCGCCAGCTCGTCCG +
Preference number: 4 (lower is better)
Translates to: GCEGPAWPIGHRGSFLAGAGETS*APPARP
Trigger: CGGACGAGCTGGCGGAGCCCAAGAAGTCTCACCGGC...TCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp ACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTCTGCCAGGTCTGCCCGCTGCCGTGCTGGGCAGATaGGGGAGCCTGACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TEWVVVSGARGALPGLPAAVLGR*GSLTSS
Trigger: AGAGCTGGTCAGGCTCCCCCATCTGCCCAGCACGGC...AGCGGGCAGACCTGGCAGAGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp TGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGTGCGAGGGGCCCGCATaGCCCATCGGCCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: WALSQSQHWLSWLRGARMCEGPA*PIGHRG
Trigger: CCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCA...CATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR TCA 90 bp TCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTCTGCCAGGCCGCTGTGTAGTTGTTaGCGCTGGCCACGGCCACGG +
Preference number: 4 (lower is better)
Translates to: SGRNGVGGSLRRQGRSARPLCSC*RWPRPR
Trigger: CCGTGGCCGTGGCCAGCGTCAACAACTACACAGCGG...CCTGGCAGAGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp GGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCTCCACATGCACAGGTaGCCCAGGTCTTCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: GSEPVPTLAELAARGPHGLHMHR*PRSSRP
Trigger: GGGCCGCGAAGACCTGGGTCACCTGTGCATGTGGAG...GCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp GAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGCTGTGCGCCGCAGCATaGGCTTGGGGTTCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: EGPAWPIGHRGSFLAGTELCAAA*AWGSWR
Trigger: CCGCCAAGAACCCCAAGCTCATGCTGCGGCGCACAG...CTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp CCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGCTGTGCGCCGCAGCATaGGCTTGGGGTTCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: PTLAELAARGPHGPSATELCAAA*AWGSWR
Trigger: CCGCCAAGAACCCCAAGCTCATGCTGCGGCGCACAG...CTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp CGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGCCGTCTTCCACCACTaGGGTGTCGTCCAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: RGARMAHRPQRVVSGRNGAVFHH*GVVQVP
Trigger: CGGGACCTGGACGACACCTCAGTGGTGGAAGACGGC...TCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp CACAGAGCACCCCATGGCGCGGGCACTGCCCACTCTACCAACAGCCGCCCAAGCGCAGATGGGGGAGCCTaGCCAGCTCTCTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: HRAPHGAGTAHSTNSRPSADGGA*PALWPP
Trigger: TGGAGGCCAGAGAGCTGGTCAGGCTCCCCCATCTGC...GCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGCGCCATGGGGTGCTCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp ACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTAGTCCCAACACTGGCTaGGTTGGCTGCGAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: TLAELAARGPHGPSATEGSPNTG*VGCEGP
Trigger: GGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACT...ACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR GCA 90 bp CCTCCGGGCTGGCGGCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCAGGCTCCCCGGGGTGGTaGTTGATCCACTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PPGWRPPLPQFVLGRLDAGSPGW*LIHFSL
Trigger: GAGGGAGAAGTGGATCAAGCACCACCCCGGGGAGCC...TGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp CCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGGCACAGTGCAGGCCGTaGTGGGCAGATGGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PPLPQFVLGRLDARGSWQAQCRP*WADGGA
Trigger: GGCTCCCCCATCTGCCCAGCACGGCCTGCACTGTGC...CTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGCCATGGCGCGGGCACTaGCCACTCTACCAACAGCCG +
Preference number: 4 (lower is better)
Translates to: EGPAWPIGHRGSFLAGTEPWRGH*PLYQQP
Trigger: CGGCTGTTGGTAGAGTGGGCAGTGCCCGCGCCATGG...CTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGCCCCTCCACCCTCCCTaGTCCTGGAGAAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: EGPAWPIGHRGSFLAGTEPLHPP*SWRSPQ
Trigger: CTGTGGGCTTCTCCAGGAGCAGGGAGGGTGGAGGGG...CTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp ATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGCGCCAGGGGCGCTCTaGCAGGTCTGCCCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: MGSEPVPTLAELAARGPHAPGAL*QVCPLS
Trigger: AGAGAGCGGGCAGACCTGGCAGAGCGCCCCTGGCGC...ATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR CCA 90 bp GCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGACGCGTTCGGGTGGTTaGCCGCCACGTTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: ARGPHGPSATEGRFWQERTRSGG*PPRSAC
Trigger: GCATGCTGAACGTGGCGGCCAACCACCCGAACGCGT...CCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGCGTGTCGGTGTCCATaGCCCGCACGCTCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: RGARMAHRPQRVVSGRNGACRCP*PARSAS
Trigger: ACTCGCTGAGCGTGCGGGCCATGGACACCGACACGC...TCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp CAGCCCCCATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCTGATAGAGGCGGTTaGCGGCCGCCAGGTACACGG +
Preference number: 4 (lower is better)
Translates to: QPPWALSQSQHWLSWLRGADRGG*RPPGTR
Trigger: CCGTGTACCTGGCGGCCGTCAACCGCCTCTATCAGC...CCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCATGGGGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp GAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCTGGAGCTGGATGTTaGGCTTGCGCTCACAGGCCG +
Preference number: 4 (lower is better)
Translates to: EPVPTLAELAARGPHGPSAGAGC*ACAHRP
Trigger: CGGCCTGTGAGCGCAAGCTCAACATCCAGCTCCAGC...CGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp GGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTCACGGTCACCACACCTaGGAGTGGTCCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GSFLAGTEWVVVSGARGAHGHHT*EWSWGW
Trigger: CCAGCCCCAGGACCACTCTCAGGTGTGGTGACCGTG...AGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp GGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCTTGACCCGGTACTCGTaGCTCTGGAGCCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GSEPVPTLAELAARGPHGLTRYS*LWSPRL
Trigger: CAGCCTGGGGCTCCAGAGTCACGAGTACCGGGTCAA...GCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp CAGCCCCCATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGCGGCCGAGGCGTCAATaGGGTCCACCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QPPWALSQSQHWLSWLRGRPRRQ*GPPAAP
Trigger: AGGAGCTGCTGGTGGACCTCATTGACGCCTCGGCCG...CCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCATGGGGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp TGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGAGCGGGCCTTGCCTGTaGTGGCGTCGATGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: WALSQSQHWLSWLRGARMSGPCL*WRRWSP
Trigger: AGGGCTCCATCGACGCCATCACAGGCAAGGCCCGCT...CATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp CCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGAGCGGGCCTTGCCTGTaGTGGCGTCGATGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: PHGPSATEGRFWQERSGWSGPCL*WRRWSP
Trigger: AGGGCTCCATCGACGCCATCACAGGCAAGGCCCGCT...CCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp CCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGCGATGGCTCTGCCGGTaGGACTTCTTGGGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: PHGPSATEGRFWQERSGWRWLCR*DFLGSA
Trigger: GGCGGAGCCCAAGAAGTCTCACCGGCAGAGCCATCG...CCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp CTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTGGGCAGATGGGCGGGTCGGACGGGTaGAGGAAGGCGCTCACGAAG +
Preference number: 4 (lower is better)
Translates to: LDVVEQVGGHSAGRAGQMGGSDG*RKALTK
Trigger: CTTCGTGAGCGCCTTCCTGCACCCGTCCGACCCGCC...CATCTGCCCAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp CTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTGGGCAGATGCACAGGCCGGTCCCGTaGCCTGCACCACGCTGTCGA +
Preference number: 4 (lower is better)
Translates to: LDVVEQVGGHSAGRAGQMHRPVP*PAPRCR
Trigger: TCGACAGCGTGGTGCAGGGCACGGGACCGGCCTGTG...CATCTGCCCAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp GGCGGCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTAGGTGGAGTGCACGTTaGAGGCGGCGACCTTCACCC +
Preference number: 4 (lower is better)
Translates to: GGLLSPSLCLAAWMHGALRWSAR*RRRPSP
Trigger: GGGTGAAGGTCGCCGCCTGCAACGTGCACTCCACCT...AAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp TGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAGCGAGGCCAGGCTaGACCTGTCGCGCACCGCAA +
Preference number: 4 (lower is better)
Translates to: WPPGCTGLLAAGPTGRCGAARPG*TCRAPQ
Trigger: TTGCGGTGCGCGACAGGTGCAGCCTGGCCTCGCTGC...TCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp TGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAAGGTCGACGTCCTCTaGACGCGGCCACTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: WLRGARMAHRPQRVVSGRKVDVL*TRPLGV
Trigger: TACTCCCAGTGGCCGCGTGCAGAGGACGTCGACCTT...CCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp ACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCCGGGAGCACCTTCTTaGGATGGCTCTGCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: TLAELAARGPHGPSATEGPGAPS*DGSAGE
Trigger: CTCACCGGCAGAGCCATCGCAAGAAGGTGCTCCCGG...ACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp CTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCCCCTCCACCCTCCCTaGTCCTGGAGAAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: LSQSQHWLSWLRGARMAHPLHPP*SWRSPQ
Trigger: CTGTGGGCTTCTCCAGGAGCAGGGAGGGTGGAGGGG...ATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp TGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGCCTCCAGGCTCAGGTTaGCGCCCGACAGCTGATAGA +
Preference number: 4 (lower is better)
Translates to: WLRGARMAHRPQRVVSGRPPGSG*RPTADR
Trigger: TCTATCAGCTGTCGGGCGCCAACCTGAGCCTGGAGG...CCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp GGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGAGCCGCTCCCGGGCTaGGAAGACCGACACCAGGCG +
Preference number: 4 (lower is better)
Translates to: GALGSRTNWTLWSKWVGTEPLPG*EDRHQA
Trigger: CGCCTGGTGTCGGTCTTCCCAGCCCGGGAGCGGCTC...TGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp GGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTCTGCCAGGTCTTCAGGGGCTGCAGGATaGACAGCGGGTGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GRNGVGGSLRRQGRSARSSGAAG*TAGAAG
Trigger: ACCTGCAGCACCCGCTGTCCATCCTGCAGCCCCTGA...AGACCTGGCAGAGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp AGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCGGCCCTCGCTGGCACTaGTCCAGAAATGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SWLRGARMAHRPQRVVSGGPRWH*SRNAAG
Trigger: GCCAGCAGCATTTCTGGACCAGTGCCAGCGAGGGCC...GCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGGCCGGTGAGACTTCTTaGGCTCCGCCAGCTCGTCCG +
Preference number: 4 (lower is better)
Translates to: PHGPSATEGRFWQERSGWAGETS*APPARP
Trigger: CGGACGAGCTGGCGGAGCCCAAGAAGTCTCACCGGC...CCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp CCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGTGTGGAGCAAGTGGGTaGGCACAGTGCAGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: PTLAELAARGPHGPSATECGASG*AQCRPC
Trigger: GCACGGCCTGCACTGTGCCCACCCACTTGCTCCACA...CTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp GAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTTGTGCTTGGCCGCCTaGATGCACGGGGCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: EGPAWPIGHRGSFLAGTELCLAA*MHGALG
Trigger: GCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAA...CTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp CAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCCACAGAGCACCCCATaGCGCGGGCACTGCCCACTC +
Preference number: 4 (lower is better)
Translates to: QRVVSGRNGVGGSLRRQGPQSTP*RGHCPL
Trigger: GAGTGGGCAGTGCCCGCGCCATGGGGTGCTCTGTGG...CCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp CAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGCACCCTCCCTGCTCCTaGAGAAGCCCACAGAGCACC +
Preference number: 4 (lower is better)
Translates to: QHWLSWLRGARMAHRPQRHPPCS*RSPQST
Trigger: GGTGCTCTGTGGGCTTCTCCAGGAGCAGGGAGGGTG...CCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp CAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAACACTGGCTGAGTTaGCTGCGAGGGGCCCGCATG +
Preference number: 4 (lower is better)
Translates to: QSQHWLSWLRGARMAHRPQHWLS*LRGARM
Trigger: CATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTG...TGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR TCA 90 bp GGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTGGATGTAGGACTCGGTaGGCTTCTTGGCGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: GSFLAGTEWVVVSGARGAGCRTR*ASWRRR
Trigger: GCGGCGACGCCAAGAAGCTCACCGAGTCCTACATCC...AGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp CGCTCTGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGTGGTCCTGCCGCCACTaGCAGGGCTGCGGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: RSARSARSLEQSFPVLHGWSCRH*QGCGGD
Trigger: GTCCCCGCCGCAGCCCTGTCAGTGGCGGCAGGACCA...CCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCAGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp CAGCCCCCATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGCCCCGGGGTGGTGCTTaGTCCACTTCTCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: QPPWALSQSQHWLSWLRGPRGGA*STSPSW
Trigger: CCAAGAGGGAGAAGTGGATCAAGCACCACCCCGGGG...CCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCATGGGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp CAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGGCCGTCTTCCACCACTaGGGTGTCGTCCAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: QRVVSGRNGVGGSLRRQGAVFHH*GVVQVP
Trigger: CGGGACCTGGACGACACCTCAGTGGTGGAAGACGGC...CCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp CCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGGGCCTGCGCGATGACTaGAAGGCAGGCGTCGATGTG +
Preference number: 4 (lower is better)
Translates to: PHGPSATEGRFWQERSGWGLRDD*KAGVDV
Trigger: CACATCGACGCCTGCCTTTCAGTCATCGCGCAGGCC...CCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp CACAGAGCACCCCATGGCGCGGGCACTGCCCACTCTACCAACAGCCGCCCAAGCCTCCATCCCAGAGACTaGTCTGGGGACAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: HRAPHGAGTAHSTNSRPSLHPRD*SGDRWE
Trigger: CTCCCACCTGTCCCCAGATCAGTCTCTGGGATGGAG...GCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGCGCCATGGGGTGCTCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp GAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGCTCCATCCCAGAGACTaGTCTGGGGACAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: EGPAWPIGHRGSFLAGTELHPRD*SGDRWE
Trigger: CTCCCACCTGTCCCCAGATCAGTCTCTGGGATGGAG...CTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp CTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTGGGCAGATGGCAGATGGGGGAGCCTaGCCAGCTCTCTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: LDVVEQVGGHSAGRAGQMADGGA*PALWPP
Trigger: TGGAGGCCAGAGAGCTGGTCAGGCTCCCCCATCTGC...CATCTGCCCAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GGGGTAGAAGATCAAGTTGAGGCCCAGTGGGCGTCCATTTCTCCCAGCAGCAGCCCACGGCCGAGATGTTaGCCCGGCGCCGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GVEDQVEAQWASISPSSSPRPRC*PGAAAG
Trigger: GCCAGCTGCGGCGCCGGGGCAACATCTCGGCCGTGG...GCTGCTGCTGGGAGAAATGGACGCCCACTGGGCCTCAACTTGATCTTCTACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp ATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATCCTCCAGGCTGCGGTTaGGCGGGAAGAAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: MGSEPVPTLAELAARGPHPPGCG*AGRRSC
Trigger: GCAGCTCCTTCTTCCCGCGCAACCGCAGCCTGGAGG...ATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp AGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAAGCCCAGCTTGTGCTaGTCCTTGGCGCCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SWLRGARMAHRPQRVVSGKPSLC*SLAPCL
Trigger: CAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTT...GCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp CAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCAGCTCCACAGTCCAGCTaGTCTGGCTGGAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: QSQHWLSWLRGARMAHRPAPQSS*SGWSWM
Trigger: CATCCAGCTCCAGCCAGAGCAGCTGGACTGTGGAGC...TGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp GCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGGAATTGGTGCAGTCCTaGTGCAAGGTGCACCGCGTC +
Preference number: 4 (lower is better)
Translates to: ARGPHGPSATEGRFWQERELVQS*CKVHRV
Trigger: GACGCGGTGCACCTTGCAGCAGGACTGCACCAATTC...CCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp TGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGGCTGGCTGGAATTGGTaGAGTCCTGCTGCAAGGTGC +
Preference number: 4 (lower is better)
Translates to: WLRGARMAHRPQRVVSGRAGWNW*SPAARC
Trigger: GCACCTTGCAGCAGGACTGCACCAATTCCAGCCAGC...CCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp TGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCGTGCCAGCCATGGGCTaGAGAGGCCCCCGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: CQVCPLSGTVISSVAWGAVPAMG*RGPRRR
Trigger: CCGCCTGCGGGGGCCTCTGCAGCCCATGGCTGGCAC...GGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp CTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTGGGCAGATGAAGGTGAGGTTGCCGTaGACGCAGCCCCGACGCTCG +
Preference number: 4 (lower is better)
Translates to: LDVVEQVGGHSAGRAGQMKVRLP*TQPRRS
Trigger: CGAGCGTCGGGGCTGCGTGCACGGCAACCTCACCTT...CATCTGCCCAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp CCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGCGCTCAGCGAGTCCATaGCACAGCCCTGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: PTLAELAARGPHGPSATERSASP*HSPGRT
Trigger: TGTCCTTCCAGGGCTGTGGCATGGACTCGCTGAGCG...CTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp ACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTCTGCCAGGTCTGCCCGCTCGCCCCAGCCGTCTCTaGTCAGTATTTCCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: TEWVVVSGARGALPGLPARPSRL*SVFPSL
Trigger: CAGACTGGGAAATACTGAGCAGAGACGGCTGGGGCG...AGCGGGCAGACCTGGCAGAGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp CAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACTCTCCCCCAGTTTGTaGTTGGCCGCCTGGATGCAC +
Preference number: 4 (lower is better)
Translates to: QSQHWLSWLRGARMAHRPLSPSL*LAAWMH
Trigger: GTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAG...TGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp ACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCTCTCCCCCAGTTTGTaGTTGGCCGCCTGGATGCAC +
Preference number: 4 (lower is better)
Translates to: TLAELAARGPHGPSATEGLSPSL*LAAWMH
Trigger: GTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAG...ACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp CCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGGTGCCGACAGGCAGCTaGTACAGGCTGTGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: PHGPSATEGRFWQERSGWVPTGS*YRLCGG
Trigger: ACCCCCACACAGCCTGTACCAGCTGCCTGTCGGCAC...CCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp GGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGATCCCGGCCAATGTGGTaGACGGCCATGGACACATTC +
Preference number: 4 (lower is better)
Translates to: GCEGPAWPIGHRGSFLAGSRPMW*TAMDTF
Trigger: GAATGTGTCCATGGCCGTCCACCACATTGGCCGGGA...TCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGGCTCCCGGCCAATGTaGTGGACGGCCATGGACACA +
Preference number: 4 (lower is better)
Translates to: PAWPIGHRGSFLAGTEWVGSRPM*WTAMDT
Trigger: TGTGTCCATGGCCGTCCACCACATTGGCCGGGAGCC...CACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp GGCGGCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTCCACTCTCCCAGCAGTaGGTGGGTTTCCTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: GGLLSPSLCLAAWMHGALPLSQQ*VGFLCL
Trigger: CAGGCACAGGAAACCCACCCACTGCTGGGAGAGTGG...AAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGTGCCGTGCAGCGCGATaGTCAGCAGCGAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PQRVVSGRNGVGGSLRRQCRAAR*SAARPG
Trigger: GCCTGGCCTCGCTGCTGACCATCGCGCTGCACGGCA...CTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp CCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGCAGCAGGAAGAATaGCTCCCCCACCGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: PPLPQFVLGRLDARGSWQQQQEE*LPHRLP
Trigger: CGGGAGACGGTGGGGGAGCCATTCTTCCTGCTGCTG...CTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp TGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGCAAGTTGAGGCCCAGTaGGCGTCCATTTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: WLRGARMAHRPQRVVSGRQVEAQ*ASISPS
Trigger: GCTGGGAGAAATGGACGCCCACTGGGCCTCAACTTG...CCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp GAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGATGCACGGGGCTCTTaGCAGCAGGACCAACTGGAC +
Preference number: 4 (lower is better)
Translates to: EPVPTLAELAARGPHGPSDARGS*QQDQLD
Trigger: GTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATC...CGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp CCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGCCACAGAGCACCCCATaGCGCGGGCACTGCCCACTC +
Preference number: 4 (lower is better)
Translates to: PQRVVSGRNGVGGSLRRQPQSTP*RGHCPL
Trigger: GAGTGGGCAGTGCCCGCGCCATGGGGTGCTCTGTGG...CTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp CCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGCACCCTCCCTGCTCCTaGAGAAGCCCACAGAGCACC +
Preference number: 4 (lower is better)
Translates to: PAWPIGHRGSFLAGTEWVHPPCS*RSPQST
Trigger: GGTGCTCTGTGGGCTTCTCCAGGAGCAGGGAGGGTG...CACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp CCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGCTGGCAGGAACGGAGTaGGTGGTAGTCTCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: PAWPIGHRGSFLAGTEWVLAGTE*VVVSGA
Trigger: GGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAG...CACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR CCA 90 bp ACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTCTGCCAGGTCTGCCCGCTACAGAGGGTCGTTTCTaGCAGGAACGGAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: TEWVVVSGARGALPGLPATEGRF*QERSGW
Trigger: CCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGT...AGCGGGCAGACCTGGCAGAGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
3UTR CAA 72 bp AACTTGTGCTGCAGTTGTGTCCTCCGGGCCGTGGGGTaGGCCTCCAGCGCGGCCATGATCTGCGGCCGATAC +
Preference number: 4 (lower is better)
Translates to: NLCCSCVLRAVG*ASSAAMICGRY
Trigger: GTATCGGCCGCAGATCATGGCCGCGCTGGAGGCCAACCCCACGGCCCGGAGGACACAACTGCAGCACAAGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512744.5
CDS-3UTR TCA 90 bp ATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATCATTCCCATGGATGGTaGTCCTGGTGCCCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: MGSEPVPTLAELAARGPHHSHGW*SWCPRP
Trigger: AGGCCGGGGGCACCAGGATCACCATCCATGGGAATG...ATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp GAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGTCATCTCTTGCTCGCTaGGCGGCGTCATGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: EPVPTLAELAARGPHGPSSSLAR*AASCPG
Trigger: TCCAGGACATGACGCCGCTCAGCGAGCAAGAGATGA...CGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR TCA 90 bp CCATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCTCATCTCTTGCTCGCTaGGCGGCGTCATGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PWALSQSQHWLSWLRGARSSLAR*AASCPG
Trigger: TCCAGGACATGACGCCGCTCAGCGAGCAAGAGATGA...GCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR TCA 90 bp AGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGAGTCCCAACACTGGCTaGGTTGGCTGCGAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SLCLAAWMHGALGSRTNWSPNTG*VGCEGP
Trigger: GGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACT...CCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp TCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCGGGACCCCTCCCGCCGGTCCCGTGCCCTaGACCACGCTGTCGAGCACC +
Preference number: 4 (lower is better)
Translates to: SLEQSFPVLHGEPLGTPPAGPVP*TTLSST
Trigger: GGTGCTCGACAGCGTGGTGCAGGGCACGGGACCGGC...GGGAGGGGTCCCGAGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp TGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGCAGTCACCACCCGCCTaGTCACCACCTGCATGCTCT +
Preference number: 4 (lower is better)
Translates to: WALSQSQHWLSWLRGARMQSPPA*SPPACS
Trigger: AGAGCATGCAGGTGGTGAGCAGGCGGGTGGTGACTG...CATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp GGCGGCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTCCCTCGGCAGGAGGTTaGAGTAGGCAATCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: GGLLSPSLCLAAWMHGALPSAGG*SRQSGD
Trigger: GTCACCAGATTGCCTACTGCAACCTCCTGCCGAGGG...AAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp GGCGGCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTACCGCAAAGTCCTTCTaGTGCTCCAGCGCGTGGACA +
Preference number: 4 (lower is better)
Translates to: GGLLSPSLCLAAWMHGALTAKSF*CSSAWT
Trigger: TGTCCACGCGCTGGAGCAGCAGAAGGACTTTGCGGT...AAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp AGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCACCGCAAAGTCCTTCTaGTGCTCCAGCGCGTGGACA +
Preference number: 4 (lower is better)
Translates to: SWLRGARMAHRPQRVVSGTAKSF*CSSAWT
Trigger: TGTCCACGCGCTGGAGCAGCAGAAGGACTTTGCGGT...GCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp AGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCAAGGTCGACGTCCTCTaGACGCGGCCACTGGGAGTA +
Preference number: 4 (lower is better)
Translates to: RVVSGRNGVGGSLRRQGRKVDVL*TRPLGV
Trigger: TACTCCCAGTGGCCGCGTGCAGAGGACGTCGACCTT...GCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp CGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGCGTCGATGAAGGCCTaGGCGATGACTGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RGARMAHRPQRVVSGRNGASMKA*AMTERQ
Trigger: CTGCCTTTCAGTCATCGCGCAGGCCTTCATCGACGC...TCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGCGCCCCAGCCGTCTCTaGTCAGTATTTCCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: EGPAWPIGHRGSFLAGTERPSRL*SVFPSL
Trigger: CAGACTGGGAAATACTGAGCAGAGACGGCTGGGGCG...CTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp AGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGGTGGACGCGTTCGGGTaGTTGGCCGCCACGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SLCLAAWMHGALGSRTNWVDAFG*LAATFS
Trigger: GCTGAACGTGGCGGCCAACCACCCGAACGCGTCCAC...CCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CAGGCAGCTGGTACAGGCTGTGTGGGGGTACACTTGTGCAGTGCGGCTGCAGTCCGCAGTCCCCACAGGTaGAGTGCACGTTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: QAAGTGCVGVHLCSAAAVRSPHR*SARCRR
Trigger: CCGCCTGCAACGTGCACTCCACCTGTGGGGACTGCG...GACTGCAGCCGCACTGCACAAGTGTACCCCCACACAGCCTGTACCAGCTGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR CCA 90 bp TGGTACAGGCTGTGTGGGGGTACACTTGTGCAGTGCGGCTGCAGTCGTAGATGGTGGCAGGACAGCGGCTaGGGCCCTCGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: WYRLCGGTLVQCGCSRRWWQDSG*GPRWHW
Trigger: CCAGTGCCAGCGAGGGCCCCAGCCGCTGTCCTGCCA...CCATCTACGACTGCAGCCGCACTGCACAAGTGTACCCCCACACAGCCTGTACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR CCA 90 bp CCCCCATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCTGCAGGATCATGCCTaGGTACTCCTGGCGCACATC +
Preference number: 4 (lower is better)
Translates to: PPWALSQSQHWLSWLRGALQDHA*VLLAHI
Trigger: GATGTGCGCCAGGAGTACCCAGGCATGATCCTGCAG...GGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCATGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGACCAAAGGCAGGGCCTaGGACCCGAGCCACAGTGCG +
Preference number: 4 (lower is better)
Translates to: PQRVVSGRNGVGGSLRRQTKGRA*DPSHSA
Trigger: CGCACTGTGGCTCGGGTCCCAGGCCCTGCCTTTGGT...CTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCTGAGCGGGAACACCTaGCTCTTCCGGGTCGTGTGC +
Preference number: 4 (lower is better)
Translates to: QRVVSGRNGVGGSLRRQGLSGNT*LFRVVC
Trigger: GCACACGACCCGGAAGAGCCAGGTGTTCCCGCTCAG...CCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp AGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCTCGTTCACCAGGACCTaGAGCTCGGAGCCTACATGG +
Preference number: 4 (lower is better)
Translates to: SWLRGARMAHRPQRVVSGSFTRT*SSEPTW
Trigger: CCATGTAGGCTCCGAGCTCCAGGTCCTGGTGAACGA...GCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGTCAGGTTCCGGGGCTTaGCCTCGATGTTCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: PAWPIGHRGSFLAGTEWVSGSGA*PRCSPA
Trigger: TGCGGGAGAACATCGAGGCCAAGCCCCGGAACCTGA...CACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp CCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGCGTGTCGGTGTCCATaGCCCGCACGCTCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: PQRVVSGRNGVGGSLRRQACRCP*PARSAS
Trigger: ACTCGCTGAGCGTGCGGGCCATGGACACCGACACGC...CTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp TGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGATTGTGCTTGGCCGCCTaGATGCACGGGGCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: WPPGCTGLLAAGPTGRCGLCLAA*MHGALG
Trigger: GCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAA...TCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp CAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGATTTCCAGTGTTGCATaGGGAGCCTCTCGGGACCCC +
Preference number: 4 (lower is better)
Translates to: QHWLSWLRGARMAHRPQRISSVA*GASRDP
Trigger: GGGGTCCCGAGAGGCTCCCCATGCAACACTGGAAAT...CCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR CCA 90 bp AACTTGTGCTGCAGTTGTGTCCTCCGGGCCGTGGGGTTGGCCTCCAGCGCGGCCATTTCCAGTGTTGCATaGGGAGCCTCTCGGGACCCC +
Preference number: 4 (lower is better)
Translates to: NLCCSCVLRAVGLASSAAISSVA*GASRDP
Trigger: GGGGTCCCGAGAGGCTCCCCATGCAACACTGGAAAT...GGCCGCGCTGGAGGCCAACCCCACGGCCCGGAGGACACAACTGCAGCACAAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512744.5
CDS-3UTR CCA 90 bp TGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTGCGAGGGGCCCGCATaGCCCATCGGCCACAGAGGG +
Preference number: 4 (lower is better)
Translates to: CQVCPLSGTVISSVAWGACEGPA*PIGHRG
Trigger: CCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCA...GGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR CCA 90 bp TGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGAGCCAGTCCCAACACTaGCTGAGTTGGCTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: WALSQSQHWLSWLRGARMSQSQH*LSWLRG
Trigger: CCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCT...CATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
3UTR CAA 72 bp ATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTaGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: MHGALGSRTNWT*WSKWVGTVQAV
Trigger: CACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp ATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGCATGTACCAGAAGGTaGGGTTGCCGTGCACGCAGC +
Preference number: 4 (lower is better)
Translates to: MGSEPVPTLAELAARGPHACTRR*GCRARS
Trigger: GCTGCGTGCACGGCAACCTCACCTTCTGGTACATGC...ATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp CCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCGGGACCCGAAGTCCACTGGCGCTaGTGCGTTGCTCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PALWNSHFQCCMGSLSGPEVHWR*CVAQGP
Trigger: GGGGCCCTGAGCAACGCATCAGCGCCAGTGGACTTC...GGGTCCCGAGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp ACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTCTGCCAGGTCTGCCCGCTCCAGCAGCTCCTTCATaGTGCTGGTGTAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: TEWVVVSGARGALPGLPAPAAPS*CWCSTP
Trigger: TGGAGTACTACACCAGCATCATGAAGGAGCTGCTGG...AGCGGGCAGACCTGGCAGAGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp CCTCCGGGCTGGCGGCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCATGTCCTTCTTGTCTATaGGACTCATGGCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PPGWRPPLPQFVLGRLDACPSCL*DSWPGR
Trigger: CCTCCCTGGCCATGAGTCTCATAGACAAGAAGGACA...TGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp GGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTCTGCCAGGTCTGGTAGAAGATCAAGTTaGGGCCCAGTGGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: GRNGVGGSLRRQGRSARSGRRSS*GPVGVH
Trigger: ATGGACGCCCACTGGGCCTCAACTTGATCTTCTACC...AGACCTGGCAGAGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GCAGCTGGTACAGGCTGTGTGGGGGTACACTTGTGCAGTGCGGCTGCAGTCGTATCCCCACAGGTGGAGTaGACGTTGCAGGCGGCGACC +
Preference number: 4 (lower is better)
Translates to: AAGTGCVGVHLCSAAAVVSPQVE*TLQAAT
Trigger: GGTCGCCGCCTGCAACGTGCACTCCACCTGTGGGGA...TACGACTGCAGCCGCACTGCACAAGTGTACCCCCACACAGCCTGTACCAGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR GCA 90 bp TGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGAGGCTGCCCGAGATCTaGAGGATCATGCCTGGGTAC +
Preference number: 4 (lower is better)
Translates to: WALSQSQHWLSWLRGARMRLPEI*RIMPGY
Trigger: GTACCCAGGCATGATCCTGCAGATCTCGGGCAGCCT...CATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp GAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGGTGCGGGTCACGAAGTaGTTATACTCCAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: EGPAWPIGHRGSFLAGTEVRVTK*LYSRKG
Trigger: CCCCTTCCTGGAGTATAAGCACTTCGTGACCCGCAC...CTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp AGTCTGAGTCACAGGCACGGGGTAGAAGATCAAGTTGAGGCCCAGTGGGCGTCCGCAGCGAGGCCAGGCTaGACCTGTCGCGCACCGCAA +
Preference number: 4 (lower is better)
Translates to: SLSHRHGVEDQVEAQWASAARPG*TCRAPQ
Trigger: TTGCGGTGCGCGACAGGTGCAGCCTGGCCTCGCTGC...GGACGCCCACTGGGCCTCAACTTGATCTTCTACCCCGTGCCTGTGACTCAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GGGGTAGAAGATCAAGTTGAGGCCCAGTGGGCGTCCATTTCTCCCAGCAGCAGCGCACAGTGCAGGCCGTaGTGGGCAGATGGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GVEDQVEAQWASISPSSSAQCRP*WADGGA
Trigger: GGCTCCCCCATCTGCCCAGCACGGCCTGCACTGTGC...GCTGCTGCTGGGAGAAATGGACGCCCACTGGGCCTCAACTTGATCTTCTACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp CAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTGCGCCAGGGGCGCTCTaGCAGGTCTGCCCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: QVCPLSGTVISSVAWGASAPGAL*QVCPLS
Trigger: AGAGAGCGGGCAGACCTGGCAGAGCGCCCCTGGCGC...AGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR CCA 90 bp TCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCGGGACCCCTCCCCGTAACCGGTGTACGTaGCGCCCACGAGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: SLEQSFPVLHGEPLGTPPRNRCT*RPRAGG
Trigger: GCCGCCTGCTCGTGGGCGCCACGTACACCGGTTACG...GGGAGGGGTCCCGAGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGTGCTCTGGCTGGAGCTaGATGTTGAGCTTGCGCTCA +
Preference number: 4 (lower is better)
Translates to: QHWLSWLRGARMAHRPQRCSGWS*MLSLRS
Trigger: TGAGCGCAAGCTCAACATCCAGCTCCAGCCAGAGCA...CCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCATCCAGCTGCTCTGGCTaGAGCTGGATGTTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: QSQHWLSWLRGARMAHRPSSCSG*SWMLSL
Trigger: CAAGCTCAACATCCAGCTCCAGCCAGAGCAGCTGGA...TGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp ACAGGGCCACTGTGCCGACAGGCAGCTGGTACAGGCTGTGTGGGGGTACACTTGGTGCCGACAGGCAGCTaGTACAGGCTGTGTGGGGGT +
Preference number: 4 (lower is better)
Translates to: TGPLCRQAAGTGCVGVHLVPTGS*YRLCGG
Trigger: ACCCCCACACAGCCTGTACCAGCTGCCTGTCGGCAC...CAAGTGTACCCCCACACAGCCTGTACCAGCTGCCTGTCGGCACAGTGGCCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR CCA 90 bp CGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGGCCGCCCCTTTAGTTaGAGGCTGAGCGGGAACACC +
Preference number: 4 (lower is better)
Translates to: RLDARGSWQQDQLDVVEQGRPFS*RLSGNT
Trigger: GGTGTTCCCGCTCAGCCTCCAACTAAAGGGGCGGCC...TTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp GGCGGCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTTGGAGGTCATTCCCATaGATGGTGATCCTGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GGLLSPSLCLAAWMHGALWRSFP*MVILVP
Trigger: GGGCACCAGGATCACCATCCATGGGAATGACCTCCA...AAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp AGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGGGGCCCCCTCAGGCATaGTGCAGGCGATGCTGGTAT +
Preference number: 4 (lower is better)
Translates to: SLCLAAWMHGALGSRTNWGPPQA*CRRCWY
Trigger: ATACCAGCATCGCCTGCACCATGCCTGAGGGGGCCC...CCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGGGCCGTAGAGAACTGTaGGTTGGGGAGGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: PPLPQFVLGRLDARGSWQGRREL*VGEVVQ
Trigger: CTGGACTACCTCCCCAACCCACAGTTCTCTACGGCC...CTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp TGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAAGAGGCTCCCCGGGGTaGTGCTTGATCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: WPPGCTGLLAAGPTGRCGRGSPG*CLIHFS
Trigger: GGAGAAGTGGATCAAGCACCACCCCGGGGAGCCTCT...TCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGCAGCACGTCGGCTCTTaGTACAGAAGACGAACAGGG +
Preference number: 4 (lower is better)
Translates to: QHWLSWLRGARMAHRPQRQHVGS*YRRRTG
Trigger: CCCTGTTCGTCTTCTGTACCAAGAGCCGACGTGCTG...CCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp ACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTTCCATGCCACAGCCCTaGAAGGACACGTTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: TLAELAARGPHGPSATEGSMPQP*KDTFRF
Trigger: GAACCTGAACGTGTCCTTCCAGGGCTGTGGCATGGA...ACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp GCCACCACCTGCTCAAACTTGTGCTGCAGTTGTGTCCTCCGGGCCGTGGGGTTGGCAACGTGCCCTTGGTaGAGAGCAGGCGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: ATTCSNLCCSCVLRAVGLATCPW*RAGGSG
Trigger: ACCTGACCCGCCTGCTCTCCACCAAGGGCACGTTGC...CAACCCCACGGCCCGGAGGACACAACTGCAGCACAAGTTTGAGCAGGTGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512744.5
CDS-3UTR CCA 90 bp CCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGCAAGTTGAGGCCCAGTaGGCGTCCATTTCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PHGPSATEGRFWQERSGWQVEAQ*ASISPS
Trigger: GCTGGGAGAAATGGACGCCCACTGGGCCTCAACTTG...CCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp GCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGGCCGTGCTGGGCAGATaGGGGAGCCTGACCAGCTCT +
Preference number: 4 (lower is better)
Translates to: ALGSRTNWTLWSKWVGTVAVLGR*GSLTSS
Trigger: AGAGCTGGTCAGGCTCCCCCATCTGCCCAGCACGGC...CACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp CCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGACAGAGGGTCGTTTCTaGCAGGAACGGAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: PAWPIGHRGSFLAGTEWVTEGRF*QERSGW
Trigger: CCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGT...CACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR CCA 90 bp ATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATAGCCAGTCCCAACACTaGCTGAGTTGGCTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: MGSEPVPTLAELAARGPHSQSQH*LSWLRG
Trigger: CCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCT...ATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR TCA 90 bp CGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGATGTCCTTCTTGTCTATaGGACTCATGGCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RGARMAHRPQRVVSGRNGCPSCL*DSWPGR
Trigger: CCTCCCTGGCCATGAGTCTCATAGACAAGAAGGACA...TCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp GCTCTGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGCGATGGCTCTGCCGGTaGGACTTCTTGGGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: ALPGLPALWNSHFQCCMGRWLCR*DFLGSA
Trigger: GGCGGAGCCCAAGAAGTCTCACCGGCAGAGCCATCG...CCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp CCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGCTGCACCAGTGTGGATaGGGTAGAGTTTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PHGPSATEGRFWQERSGWLHQCG*GRVSGL
Trigger: CAGCCCAGAAACTCTACCTCATCCACACTGGTGCAG...CCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp TGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCGGGACGGTGGTCCTCCAGGCTaGGGTTGCGCGGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: CPLSGTVISSVAWGASRDGGPPG*GCAGRR
Trigger: CCTTCTTCCCGCGCAACCGCAGCCTGGAGGACCACC...GTCCCGAGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp GAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGTGCTCCTTGGCGCCCTaGTTGATCTTGAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: EPVPTLAELAARGPHGPSCSLAP*LILRML
Trigger: CAACATCCTCAAGATCAAGCAGGGCGCCAAGGAGCA...CGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp CCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCGGGACCCACGAAGCCCAGCTTGTaGTGCTCCTTGGCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: PALWNSHFQCCMGSLSGPTKPSL*CSLAPC
Trigger: GCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGT...GGGTCCCGAGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp GCAGCTGGTACAGGCTGTGTGGGGGTACACTTGTGCAGTGCGGCTGCAGTCGTAAGGTGGAGTGCACGTTaGAGGCGGCGACCTTCACCC +
Preference number: 4 (lower is better)
Translates to: AAGTGCVGVHLCSAAAVVRWSAR*RRRPSP
Trigger: GGGTGAAGGTCGCCGCCTGCAACGTGCACTCCACCT...TACGACTGCAGCCGCACTGCACAAGTGTACCCCCACACAGCCTGTACCAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR GCA 90 bp TGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCAGTCCAGGCGGAACCTaGTGCCCCGCTGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: CQVCPLSGTVISSVAWGASPGGT*CPAVPP
Trigger: AGGAGGCACAGCGGGGCAGCAGGTTCCGCCTGGACT...GGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp TCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTCTGCCAGGGCTCAGCGAAGCCTTTaGGGATTTCCTCTCGGATCT +
Preference number: 4 (lower is better)
Translates to: SGRNGVGGSLRRQGRSARAQRSL*GFPLGS
Trigger: AGATCCGAGAGGAAATCCGCAAAGGCTTCGCTGAGC...CCTGGCAGAGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp AGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCGCAAAGTCCTTCTGCTaGTCCAGCGCGTGGACAAAG +
Preference number: 4 (lower is better)
Translates to: RVVSGRNGVGGSLRRQGRAKSFC*SSAWTK
Trigger: CTTTGTCCACGCGCTGGAGCAGCAGAAGGACTTTGC...GCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp TGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGGCAGACAGCTGTACATaGAGATGGACATCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: WLRGARMAHRPQRVVSGRADSCT*RWTSSW
Trigger: CCAACTGGATGTCCATCTGCATGTACAGCTGTCTGC...CCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGACCCTTGTTGATTTGCTaGTTGATGGCACACAGCAGC +
Preference number: 4 (lower is better)
Translates to: GCEGPAWPIGHRGSFLAGPLLIC*LMAHSS
Trigger: GCTGCTGTGTGCCATCAAGCAGCAAATCAACAAGGG...TCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GGGGTAGAAGATCAAGTTGAGGCCCAGTGGGCGTCCATTTCTCCCAGCAGCAGCGCTTGGCCGCCTGGATaGACGGGGCTCTTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GVEDQVEAQWASISPSSSAWPPG*TGLLAA
Trigger: TGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGC...GCTGCTGCTGGGAGAAATGGACGCCCACTGGGCCTCAACTTGATCTTCTACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp AGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCCAGCTACAGCCTCGGTaGATCTTAACCCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SWLRGARMAHRPQRVVSGQLQPR*ILTPLL
Trigger: AAGGAGAGGGGTTAAGATGCACCGAGGCTGTAGCTG...GCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp CTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGGAACTAGCCCCACGGTaGACGCGTTCGGGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LGSRTNWTLWSKWVGTVQELAPR*TRSGGW
Trigger: CCAACCACCCGAACGCGTCCACCGTGGGGCTAGTTC...CTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CGCTCTGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGCGCAGTCCCCACAGGTaGAGTGCACGTTGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: RSARSARSLEQSFPVLHGRSPHR*SARCRR
Trigger: CCGCCTGCAACGTGCACTCCACCTGTGGGGACTGCG...CCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCAGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACGCTGCTGGCTGGAATTaGTGCAGTCCTGCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: RGSWQQDQLDVVEQVGGHAAGWN*CSPAAR
Trigger: CCTTGCAGCAGGACTGCACCAATTCCAGCCAGCAGC...GTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp GGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTGGTCCAGGGCTGCACCCTaGAAAAAGGCAGTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: GPTGRCGASGWAQCRPCWSRAAP*KKAVLA
Trigger: GGCCAACACTGCCTTTTTCCAGGGTGCAGCCCTGGA...CCAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTGTGCAGCACCACCTaGTCACAGCGTACAACAGAC +
Preference number: 4 (lower is better)
Translates to: PAWPIGHRGSFLAGTEWVVCSTT*SQRTTD
Trigger: GTCTGTTGTACGCTGTGACCAGGTGGTGCTGCACAC...CACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CGCTCTGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGCCAATCCACACGCCGTaGGCCACGTCACTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: RSARSARSLEQSFPVLHGPIHTP*ATSLSR
Trigger: GCGGCTCAGTGACGTGGCCCACGGCGTGTGGATTGG...CCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCAGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGAGTGGTCCTGGGGCTaGCCCTGTGACACACACGAT +
Preference number: 4 (lower is better)
Translates to: PQRVVSGRNGVGGSLRRQEWSWG*PCDTHD
Trigger: ATCGTGTGTGTCACAGGGCCAGCCCCAGGACCACTC...CTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp GGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCTGTGGTGGACGGCCATaGACACATTCTGCACCATGT +
Preference number: 4 (lower is better)
Translates to: GSEPVPTLAELAARGPHGCGGRP*THSAPC
Trigger: ACATGGTGCAGAATGTGTCCATGGCCGTCCACCACA...GCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp GCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGGCAACGTGCCCTTGGTaGAGAGCAGGCGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: ALGSRTNWTLWSKWVGTVATCPW*RAGGSG
Trigger: ACCTGACCCGCCTGCTCTCCACCAAGGGCACGTTGC...CACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp GGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTCTGCCAGGTCTGTACTTGACAGCCAGTaGGGGCTTGTCTTCACGGAT +
Preference number: 4 (lower is better)
Translates to: GRNGVGGSLRRQGRSARSVLDSQ*GLVFTD
Trigger: ATCCGTGAAGACAAGCCCCCACTGGCTGTCAAGTAC...AGACCTGGCAGAGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp GAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGCGTAGAGGAGCTTGTTaGTTGGCGAATCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: EPVPTLAELAARGPHGPSRRGAC*LANPCP
Trigger: TGGGCAAGGATTCGCCAACCAACAAGCTCCTCTACG...CGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp GCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGCAGCAGGACCAACTaGACGTTGTGGAGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: AWPPGCTGLLAAGPTGRCGSRTN*TLWSKW
Trigger: CCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCC...ACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp CCATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCAGTCGAAAAAGTACTTaGCAGCCAGTGGGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: PWALSQSQHWLSWLRGARSRKST*QPVGAC
Trigger: ACAAGCCCCCACTGGCTGTCAAGTACTTTTTCGACT...GCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp TGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCGGCCTGCGCGATGACTaGAAGGCAGGCGTCGATGTG +
Preference number: 4 (lower is better)
Translates to: CQVCPLSGTVISSVAWGAGLRDD*KAGVDV
Trigger: CACATCGACGCCTGCCTTTCAGTCATCGCGCAGGCC...GGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp ATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGTAGAAGATCAAGTTaGGGCCCAGTGGGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: MGSEPVPTLAELAARGPHGRRSS*GPVGVH
Trigger: ATGGACGCCCACTGGGCCTCAACTTGATCTTCTACC...ATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GAAACAGGGCCACTGTGCCGACAGGCAGCTGGTACAGGCTGTGTGGGGGTACACGAATTGGTGCAGTCCTaGTGCAAGGTGCACCGCGTC +
Preference number: 4 (lower is better)
Translates to: ETGPLCRQAAGTGCVGVHELVQS*CKVHRV
Trigger: GACGCGGTGCACCTTGCAGCAGGACTGCACCAATTC...GTGTACCCCCACACAGCCTGTACCAGCTGCCTGTCGGCACAGTGGCCCTGTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR GCA 90 bp GCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGTACACTTGTGCAGTaGGGCTGCAGTCGTAGATGG +
Preference number: 4 (lower is better)
Translates to: AWPPGCTGLLAAGPTGRCGTLVQ*GCSRRW
Trigger: CCATCTACGACTGCAGCCGCACTGCACAAGTGTACC...ACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp GCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCACAGCCACCTCGTCTaGGTAGGCCCGCCCATTGAT +
Preference number: 4 (lower is better)
Translates to: ALGSRTNWTLWSKWVGTVHSHLV*VGPPID
Trigger: ATCAATGGGCGGGCCTACGCAGACGAGGTGGCTGTG...CACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp GGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCCTTGTTGATTTGCTaGTTGATGGCACACAGCAGC +
Preference number: 4 (lower is better)
Translates to: GSEPVPTLAELAARGPHGPLLIC*LMAHSS
Trigger: GCTGCTGTGTGCCATCAAGCAGCAAATCAACAAGGG...GCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp CGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGAGCCCTTGTTGATTTaGTGCTTGATGGCACACAGC +
Preference number: 4 (lower is better)
Translates to: RGARMAHRPQRVVSGRNGEPLLI*CLMAHS
Trigger: GCTGTGTGCCATCAAGCAGCAAATCAACAAGGGCTC...TCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp TGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCAGTGGGTGGGCACAGTaGAGGCCGTGCTGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: CQVCPLSGTVISSVAWGASGWAQ*RPCWAD
Trigger: ATCTGCCCAGCACGGCCTGCACTGTGCCCACCCACT...GGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp CAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTGCTTGGCCGCCTGGATaGACGGGGCTCTTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: QVCPLSGTVISSVAWGASAWPPG*TGLLAA
Trigger: TGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGC...AGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp CAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCCATGGCGCGGGCACTaGCCACTCTACCAACAGCCG +
Preference number: 4 (lower is better)
Translates to: QVCPLSGTVISSVAWGASPWRGH*PLYQQP
Trigger: CGGCTGTTGGTAGAGTGGGCAGTGCCCGCGCCATGG...AGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp GCTCTGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGCGGCGACCTTCACCCTaGCCATCTGGTGGGACGTCA +
Preference number: 4 (lower is better)
Translates to: ALPGLPALWNSHFQCCMGRRPSP*PSGGTS
Trigger: TGACGTCCCACCAGATGGCCAGGGTGAAGGTCGCCG...CCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp TCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCGGGACCCCTCCCGGCTGGGGCCCTCGCTaGCACTGGTCCAGAAATGCT +
Preference number: 4 (lower is better)
Translates to: SLEQSFPVLHGEPLGTPPGWGPR*HWSRNA
Trigger: AGCATTTCTGGACCAGTGCCAGCGAGGGCCCCAGCC...GGGAGGGGTCCCGAGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTAAGGCAGGACGGTCATaGCAGGACAGCGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QVCPLSGTVISSVAWGASKAGRS*QDSGWG
Trigger: GCCCCAGCCGCTGTCCTGCCATGACCGTCCTGCCTT...AGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp TGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAATGCCTGGGTACTCCTaGCGCACATCGATCTCGGAA +
Preference number: 4 (lower is better)
Translates to: WPPGCTGLLAAGPTGRCGMPGYS*RTSISE
Trigger: TTCCGAGATCGATGTGCGCCAGGAGTACCCAGGCAT...TCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGAGGCAGGCGTCGATGTaGTCTGTCTTGTCGATGTCA +
Preference number: 4 (lower is better)
Translates to: PAWPIGHRGSFLAGTEWVRQASM*SVLSMS
Trigger: TGACATCGACAAGACAGACCACATCGACGCCTGCCT...CACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp CAGCCCCCATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGCGTAGAGGAGCTTGTTaGTTGGCGAATCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: QPPWALSQSQHWLSWLRGRRGAC*LANPCP
Trigger: TGGGCAAGGATTCGCCAACCAACAAGCTCCTCTACG...CCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCATGGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp CAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCCCCCAGTTTGTGCTTaGCCGCCTGGATGCACGGGG +
Preference number: 4 (lower is better)
Translates to: QVCPLSGTVISSVAWGASPPVCA*PPGCTG
Trigger: CCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGG...AGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp CAGCCCCCATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGGTCTGCCCGCTCTCTaGAACAGTCATTTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: QPPWALSQSQHWLSWLRGGLPAL*NSHFQC
Trigger: ACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACC...CCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCATGGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR CCA 90 bp GCTCTGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGCTGGCAGGAACGGAGTaGGTGGTAGTCTCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: ALPGLPALWNSHFQCCMGLAGTE*VVVSGA
Trigger: GGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAG...CCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR CCA 90 bp GCTCTGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGCAACACTGGCTGAGTTaGCTGCGAGGGGCCCGCATG +
Preference number: 4 (lower is better)
Translates to: ALPGLPALWNSHFQCCMGQHWLS*LRGARM
Trigger: CATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTG...CCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
3UTR CAA 72 bp CCAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTaGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: PVCAWPPGCTGL*AAGPTGRCGAS
Trigger: ACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp GGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTGGCGATGTTCCGCCCATTaGCCCTCACAGACATCTCAA +
Preference number: 4 (lower is better)
Translates to: GPTGRCGASGWAQCRPCWRCSAH*PSQTSQ
Trigger: TTGAGATGTCTGTGAGGGTCAATGGGCGGAACATCG...CCAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp TGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGTTACTTGGCCTATCTTaGCCCGGTACTCGTGACTCT +
Preference number: 4 (lower is better)
Translates to: WALSQSQHWLSWLRGARMLLGLS*PGTRDS
Trigger: AGAGTCACGAGTACCGGGTCAAGATAGGCCAAGTAA...CATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp CCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGAAGGTAACCGGAGTCTaGTGGGTCAAACTGCATGAC +
Preference number: 4 (lower is better)
Translates to: PAWPIGHRGSFLAGTEWVKVTGV*WVKLHD
Trigger: GTCATGCAGTTTGACCCAGCAGACTCCGGTTACCTT...CACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp TGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCACTGGTCCAGAAATaGTGCTGGCTGGAATTGGTG +
Preference number: 4 (lower is better)
Translates to: WPPGCTGLLAAGPTGRCGALVQK*CWLELV
Trigger: CACCAATTCCAGCCAGCAGCATTTCTGGACCAGTGC...TCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp CTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGAGGAGTGCTGCTGGCTaGACCAGAAACAGGGCCACT +
Preference number: 4 (lower is better)
Translates to: LGSRTNWTLWSKWVGTVQRSAAG*TRNRAT
Trigger: AGTGGCCCTGTTTCTGGTGCAGCCAGCAGCACTCCT...CTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp GGGGTAGAAGATCAAGTTGAGGCCCAGTGGGCGTCCATTTCTCCCAGCAGCAGCCGCTCAGCGAGTCCATaGCACAGCCCTGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: GVEDQVEAQWASISPSSSRSASP*HSPGRT
Trigger: TGTCCTTCCAGGGCTGTGGCATGGACTCGCTGAGCG...GCTGCTGCTGGGAGAAATGGACGCCCACTGGGCCTCAACTTGATCTTCTACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTGGACCTGCTCAAACTTGTaGTGCAGTTGTGTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: GPTGRCGASGWAQCRPCWTCSNL*CSCVLR
Trigger: CCGGAGGACACAACTGCAGCACAAGTTTGAGCAGGT...CCAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp GCGGGCACTGCCCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTGACACTAGGGCGAAGTTGTTGGTaGGCGTGGGCGAGGGGAACC +
Preference number: 4 (lower is better)
Translates to: AGTAHSTNSRPSNKNLTLGRSCW*AWARGT
Trigger: GGTTCCCCTCGCCCACGCCCACCAACAACTTCGCCC...TAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp ACAGGCTGTGTGGGGGTACACTTGTGCAGTGCGGCTGCAGTCGTAGATGGTGAACGGCGACCTTCACCCTaGCCATCTGGTGGGACGTCA +
Preference number: 4 (lower is better)
Translates to: TGCVGVHLCSAAAVVDGERRPSP*PSGGTS
Trigger: TGACGTCCCACCAGATGGCCAGGGTGAAGGTCGCCG...TTCACCATCTACGACTGCAGCCGCACTGCACAAGTGTACCCCCACACAGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR CCA 90 bp ACAGGCTGTGTGGGGGTACACTTGTGCAGTGCGGCTGCAGTCGTAGATGGTGAAGGCCCTCGCTGGCACTaGTCCAGAAATGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TGCVGVHLCSAAAVVDGEGPRWH*SRNAAG
Trigger: GCCAGCAGCATTTCTGGACCAGTGCCAGCGAGGGCC...TTCACCATCTACGACTGCAGCCGCACTGCACAAGTGTACCCCCACACAGCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR CCA 90 bp CCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCGGGACCCGCCTCGCACCGAGACTaGTTGGAAACACAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: PALWNSHFQCCMGSLSGPASHRD*LETQEC
Trigger: GCACTCCTGTGTTTCCAACCAGTCTCGGTGCGAGGC...GGGTCCCGAGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp TGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCGGTTCCTTCCTCGGATaGTCAGCAGGGTCCCACCGT +
Preference number: 4 (lower is better)
Translates to: CQVCPLSGTVISSVAWGAGSFLG*SAGSHR
Trigger: ACGGTGGGACCCTGCTGACCATCCGAGGAAGGAACC...GGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTGGGCAGATGAGCTCGGAGCCTACATaGAGGTCATTCCCATGGATG +
Preference number: 4 (lower is better)
Translates to: LDVVEQVGGHSAGRAGQMSSEPT*RSFPWM
Trigger: CATCCATGGGAATGACCTCCATGTAGGCTCCGAGCT...CATCTGCCCAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp AGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGCTGTCCTGCTCCTTGTaGATAACGAGGGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SLCLAAWMHGALGSRTNWLSCSL*ITRVRG
Trigger: GCCTCTCACCCTCGTTATCCACAAGGAGCAGGACAG...CCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp GAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGCTGTCAGAGACAATCTaGATGTCGCAGCTTACTTGG +
Preference number: 4 (lower is better)
Translates to: EPVPTLAELAARGPHGPSLSETI*MSQLTW
Trigger: CCAAGTAAGCTGCGACATCCAGATTGTCTCTGACAG...CGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp AGTCTGAGTCACAGGCACGGGGTAGAAGATCAAGTTGAGGCCCAGTGGGCGTCCAGGAAGGGGATGCCCTaGCTGCGGTTCAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SLSHRHGVEDQVEAQWASRKGMP*LRFSSL
Trigger: CAAGGAGCTGAACCGCAGCCAGGGCATCCCCTTCCT...GGACGCCCACTGGGCCTCAACTTGATCTTCTACCCCGTGCCTGTGACTCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp GGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTGGGTACTTGACAGCCAGTaGGGGCTTGTCTTCACGGAT +
Preference number: 4 (lower is better)
Translates to: GPTGRCGASGWAQCRPCWVLDSQ*GLVFTD
Trigger: ATCCGTGAAGACAAGCCCCCACTGGCTGTCAAGTAC...CCAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp CTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATACTCAGGAATCTCCTTaGCGTAGAGGAGCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LSQSQHWLSWLRGARMAHTQESP*RRGACW
Trigger: CCAACAAGCTCCTCTACGCCAAGGAGATTCCTGAGT...ATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR CCA 90 bp GGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAGTGTTGAACTCATTCTaGTATTTCCTCGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: GCEGPAWPIGHRGSFLAGVLNSF*YFLDSS
Trigger: CGAGGAGTCGAGGAAATACCAGAATGAGTTCAACAC...TCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR CCA 90 bp GAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCGGCCGATACCTCTTaGCGTACTTATAAATCTCTG +
Preference number: 4 (lower is better)
Translates to: EPVPTLAELAARGPHGPSAADTS*RTYKSL
Trigger: CAGAGATTTATAAGTACGCCAAGAGGTATCGGCCGC...CGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR CCA 90 bp CAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTTGTGGAGCAAGTGGGTaGGCACAGTGCAGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: QVCPLSGTVISSVAWGASCGASG*AQCRPC
Trigger: GCACGGCCTGCACTGTGCCCACCCACTTGCTCCACA...AGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp GCTCTGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGGATGCACGGGGCTCTTaGCAGCAGGACCAACTGGAC +
Preference number: 4 (lower is better)
Translates to: ALPGLPALWNSHFQCCMGDARGS*QQDQLD
Trigger: GTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATC...CCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp AGGCAGCTGGTACAGGCTGTGTGGGGGTACACTTGTGCAGTGCGGCTGCAGTCGCAACAGTCACGTGGTTaGGTACTCCTGGCGCACATC +
Preference number: 4 (lower is better)
Translates to: RQLVQAVWGYTCAVRLQSQQSRG*VLLAHI
Trigger: GATGTGCGCCAGGAGTACCCAACCACGTGACTGTTG...CGACTGCAGCCGCACTGCACAAGTGTACCCCCACACAGCCTGTACCAGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR TCA 90 bp CCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGTGGCGATGGTCTGGTTaGAGTTCCCTACCTGGATTG +
Preference number: 4 (lower is better)
Translates to: PQRVVSGRNGVGGSLRRQWRWSG*SSLPGL
Trigger: CAATCCAGGTAGGGAACTTCAACCAGACCATCGCCA...CTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp GGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTATTTCCTCTCGGATCTaGGATTCCATCTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: GSFLAGTEWVVVSGARGAISSRI*DSISSI
Trigger: GATGGAGGAGATGGAATCTCAGATCCGAGAGGAAAT...AGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp CAGCAGCCTGACCAACTCTCCATGTGTCTCAGGCCTCACTGTAGCACTCGTAGAGCAGCCACTCCTCACTaGGTGTGTAGCGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: QQPDQLSMCLRPHCSTRRAATPH*VCSGPC
Trigger: GCAAGGCCCGCTACACACTCAGTGAGGAGTGGCTGC...TCTACGAGTGCTACAGTGAGGCCTGAGACACATGGAGAGTTGGTCAGGCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512744.5
CDS-3UTR TCA 90 bp CGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGATACTCAGAATGGCCTTaGACAGGTCATCCAGAAACT +
Preference number: 4 (lower is better)
Translates to: RGARMAHRPQRVVSGRNGYSEWP*TGHPET
Trigger: AGTTTCTGGATGACCTGTTCAAGGCCATTCTGAGTA...TCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp CACAGAGCACCCCATGGCGCGGGCACTGCCCACTCTACCAACAGCCGCCCAAGCAAATCTGACACTACTTaGAACTGTCTGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: HRAPHGAGTAHSTNSRPSKSDTT*NCLWPG
Trigger: TCCTGGCCACAGACAGTTTCAAGTAGTGTCAGATTT...GCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGCGCCATGGGGTGCTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAAGCCATCACTCCACATaGACAGGTGACCCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: GALGSRTNWTLWSKWVGTSHHST*TGDPGL
Trigger: AAGACCTGGGTCACCTGTGCATGTGGAGTGATGGCT...TGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp CGCTCTGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGTGCGCATCAGCTCCGTaGAGGGGTCTGTGTCGTTCA +
Preference number: 4 (lower is better)
Translates to: RSARSARSLEQSFPVLHGCASAP*RGLCRS
Trigger: TGAACGACACAGACCCCTGCACGGAGCTGATGCGCA...CCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCAGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp CAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGTCTGTCATGTCTGTCTaGAGCTCAGCGAAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: QRVVSGRNGVGGSLRRQGSVMSV*SSAKPL
Trigger: CAAAGGCTTCGCTGAGCTGCAGACAGACATGACAGA...CCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp CGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGGATGTAGCTCTGTGTaGTGGAGGCGAACCACTCAA +
Preference number: 4 (lower is better)
Translates to: RLDARGSWQQDQLDVVEQGCSSV*WRRTTQ
Trigger: TTGAGTGGTTCGCCTCCAGCACACAGAGCTACATCC...TTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGTGGTTGGCGAATCCTTaGCCAGCTGCAGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: ALGSRTNWTLWSKWVGTVWLANP*PAAGQR
Trigger: TCTCTGACCTGCAGCTGGGCAAGGATTCGCCAACCA...CACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGTCAAGGAGGGCTCCCTaGACCAGTGTGGATGAGGTA +
Preference number: 4 (lower is better)
Translates to: ALGSRTNWTLWSKWVGTVSRRAP*TSVDEV
Trigger: TACCTCATCCACACTGGTGCAGGGAGCCCTCCTTGA...CACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp CGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAACAGCTACAGCCTCGGTaGATCTTAACCCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: RLDARGSWQQDQLDVVEQQLQPR*ILTPLL
Trigger: AAGGAGAGGGGTTAAGATGCACCGAGGCTGTAGCTG...TTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp CAGCCGTCTCTGCTCAGTATTTCCCAGTCTGAGTCACAGGCACGGGGTAGAAGAGGCACCAGGATGTTCTaGGAGCCACCCGTAGGCACG +
Preference number: 4 (lower is better)
Translates to: QPSLLSISQSESQARGRRGTRMF*EPPVGT
Trigger: CGTGCCTACGGGTGGCTCCCAGAACATCCTGGTGCC...TCTTCTACCCCGTGCCTGTGACTCAGACTGGGAAATACTGAGCAGAGACGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGATGTCGCAGCTTACTTaGCCTATCTTGACCCGGTAC +
Preference number: 4 (lower is better)
Translates to: QRVVSGRNGVGGSLRRQGMSQLT*PILTRY
Trigger: GTACCGGGTCAAGATAGGCCAAGTAAGCTGCGACAT...CCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp GTCCTCCATCAAAGCCACCACCTGCTCAAACTTGTGCTGCAGTTGTGTCCTCCGCAGCAGCAGGAAGAATaGCTCCCCCACCGTCTCCCG +
Preference number: 4 (lower is better)
Translates to: VLHQSHHLLKLVLQLCPPQQQEE*LPHRLP
Trigger: CGGGAGACGGTGGGGGAGCCATTCTTCCTGCTGCTG...CGGAGGACACAACTGCAGCACAAGTTTGAGCAGGTGGTGGCTTTGATGGAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512744.5
CDS-3UTR CCA 90 bp CACAGAGCACCCCATGGCGCGGGCACTGCCCACTCTACCAACAGCCGCCCAAGCGTGTTGAACTCATTCTaGTATTTCCTCGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: HRAPHGAGTAHSTNSRPSVLNSF*YFLDSS
Trigger: CGAGGAGTCGAGGAAATACCAGAATGAGTTCAACAC...GCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGCGCCATGGGGTGCTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp GTCCTCCATCAAAGCCACCACCTGCTCAAACTTGTGCTGCAGTTGTGTCCTCCGCTGGCAGGAACGGAGTaGGTGGTAGTCTCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: VLHQSHHLLKLVLQLCPPLAGTE*VVVSGA
Trigger: GGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAG...CGGAGGACACAACTGCAGCACAAGTTTGAGCAGGTGGTGGCTTTGATGGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512744.5
CDS-3UTR TCA 90 bp GCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCACAGTTATAGACCATaGCTGTCATGGGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: ALGSRTNWTLWSKWVGTVHSYRP*LSWAQG
Trigger: GCCCTGAGCCCATGACAGTCATGGTCTATAACTGTG...CACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp GCAGAAACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCACCAGTGTGGATGGCAGCCACTCCTCACTaGGTGTGTAGCGGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: AETNQRSVQGGLPAPVWMAATPH*VCSGPC
Trigger: GCAAGGCCCGCTACACACTCAGTGAGGAGTGGCTGC...CATCCACACTGGTGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp CCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGAAATCTGACACTACTTaGAACTGTCTGTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PPLPQFVLGRLDARGSWQKSDTT*NCLWPG
Trigger: TCCTGGCCACAGACAGTTTCAAGTAGTGTCAGATTT...CTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp TCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCGGGACCCCTCCCTCTGCTGGGTCAAACTaGATGACATGGTGCACGGGC +
Preference number: 4 (lower is better)
Translates to: SLEQSFPVLHGEPLGTPPSAGSN*MTWCTG
Trigger: GCCCGTGCACCATGTCATGCAGTTTGACCCAGCAGA...GGGAGGGGTCCCGAGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp ACAGGCAGCTGGTACAGGCTGTGTGGGGGTACACTTGTGCAGTGCGGCTGCAGTGCACTGGTCCAGAAATaGTGCTGGCTGGAATTGGTG +
Preference number: 4 (lower is better)
Translates to: TGSWYRLCGGTLVQCGCSALVQK*CWLELV
Trigger: CACCAATTCCAGCCAGCAGCATTTCTGGACCAGTGC...ACTGCAGCCGCACTGCACAAGTGTACCCCCACACAGCCTGTACCAGCTGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR GCA 90 bp CGCTCTGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGGACCCGAGCCACAGTaGGGATGTTGTTCCCATAGT +
Preference number: 4 (lower is better)
Translates to: RSARSARSLEQSFPVLHGGPEPQ*GCCSHS
Trigger: ACTATGGGAACAACATCCGCACTGTGGCTCGGGTCC...CCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCAGAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp TCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCGGGACCCCTCCCGGGAACAGTCGGGGCTaGCCATGGCACAGTTATAGA +
Preference number: 4 (lower is better)
Translates to: SLEQSFPVLHGEPLGTPPGNSRG*PWHSYR
Trigger: TCTATAACTGTGCCATGGGCAGCCCCGACTGTTCCC...GGGAGGGGTCCCGAGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp CCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCGCATGGTGCAGGCGATaGTGGTATCTGTGCGCATCA +
Preference number: 4 (lower is better)
Translates to: PGLPALWNSHFQCCMGSLAWCRR*WYLCAS
Trigger: TGATGCGCACAGATACCAGCATCGCCTGCACCATGC...GAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp CCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGACTTGGGGAAGAAGGTaGGGGTCACGAAGTGCTTAT +
Preference number: 4 (lower is better)
Translates to: PQRVVSGRNGVGGSLRRQTWGRR*GSRSAY
Trigger: ATAAGCACTTCGTGACCCGCACCTTCTTCCCCAAGT...CTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp GGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTCTGCCAGGTCTAAGACGATGAGGAAGTaGTTGTTGTTGAGTAGTGAG +
Preference number: 4 (lower is better)
Translates to: GRNGVGGSLRRQGRSARSKTMRK*LLLSSE
Trigger: CTCACTACTCAACAACAAGCACTTCCTCATCGTCTT...AGACCTGGCAGAGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGAGTCATTTCCAGTGTTaGATGGGGAGCCTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: ALGSRTNWTLWSKWVGTVSHFQC*MGSLSG
Trigger: TCCCGAGAGGCTCCCCATGCAACACTGGAAATGACT...CACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCGGGACCAGTCATTTCCAGTGTTaGATGGGGAGCCTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: ARSLEQSFPVLHGEPLGTSHFQC*MGSLSG
Trigger: TCCCGAGAGGCTCCCCATGCAACACTGGAAATGACT...GGTCCCGAGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR CCA 90 bp CAGCCGTCTCTGCTCAGTATTTCCCAGTCTGAGTCACAGGCACGGGGTAGAAGAGTGTTCTCGAAGCGGTaGTCCTCCAGGCTGCGGTTG +
Preference number: 4 (lower is better)
Translates to: QPSLLSISQSESQARGRRVFSKR*SSRLRL
Trigger: CAACCGCAGCCTGGAGGACCACCGCTTCGAGAACAC...TCTTCTACCCCGTGCCTGTGACTCAGACTGGGAAATACTGAGCAGAGACGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAAGAAATGCTGCTGGCTaGAATTGGTGCAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RLDARGSWQQDQLDVVEQRNAAG*NWCSPA
Trigger: AGCAGGACTGCACCAATTCCAGCCAGCAGCATTTCT...TTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp AGCTGGTACAGGCTGTGTGGGGGTACACTTGTGCAGTGCGGCTGCAGTCGTAGACTGGTACAGGCTGTGTaGGGGTACACTTGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SWYRLCGGTLVQCGCSRRLVQAV*GYTCAV
Trigger: CACTGCACAAGTGTACCCCCACACAGCCTGTACCAG...TCTACGACTGCAGCCGCACTGCACAAGTGTACCCCCACACAGCCTGTACCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR CCA 90 bp GCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTTCGTTGACCGAGCAGTaGATGATTCTGTCAGAGACA +
Preference number: 4 (lower is better)
Translates to: AWPPGCTGLLAAGPTGRCSLTEQ*MILSET
Trigger: TGTCTCTGACAGAATCATCCACTGCTCGGTCAACGA...ACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp GCGGGCACTGCCCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTGACACTATGGGTTTCCTGTGCCTaGGAGCTGCCCTGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: AGTAHSTNSRPSNKNLTLWVSCA*ELPWEL
Trigger: CAACTCCCAGGGCAGCTCCCAGGCACAGGAAACCCA...TAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp GGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAACTCAGGAATCTCCTTaGCGTAGAGGAGCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: GALGSRTNWTLWSKWVGTTQESP*RRGACW
Trigger: CCAACAAGCTCCTCTACGCCAAGGAGATTCCTGAGT...TGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp GCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGGGTCTGCCCGCTCTCTaGAACAGTCATTTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: ALGSRTNWTLWSKWVGTVGLPAL*NSHFQC
Trigger: ACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACC...CACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp GGTACAGGCTGTGTGGGGGTACACTTGTGCAGTGCGGCTGCAGTCGTAGATGGTCGATGTTCCGCCCATTaGCCCTCACAGACATCTCAA +
Preference number: 4 (lower is better)
Translates to: GTGCVGVHLCSAAAVVDGRCSAH*PSQTSQ
Trigger: TTGAGATGTCTGTGAGGGTCAATGGGCGGAACATCG...ACCATCTACGACTGCAGCCGCACTGCACAAGTGTACCCCCACACAGCCTGTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR TCA 90 bp CCAGCTCTCTGGCCTCCATCCCAGAGACTGATCTGGGGACAGGTGGGAGGGGATGGAAGTGCTTGTTGTTaGGTAGTGAGGAGAACAAGC +
Preference number: 4 (lower is better)
Translates to: PALWPPSQRLIWGQVGGDGSACC*VVRRTS
Trigger: GCTTGTTCTCCTCACTACTCAACAACAAGCACTTCC...ATCCCCTCCCACCTGTCCCCAGATCAGTCTCTGGGATGGAGGCCAGAGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp AGTCTGAGTCACAGGCACGGGGTAGAAGATCAAGTTGAGGCCCAGTGGGCGTCCCCAGCAGCTCCTTCATaGTGCTGGTGTAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: SLSHRHGVEDQVEAQWASPAAPS*CWCSTP
Trigger: TGGAGTACTACACCAGCATCATGAAGGAGCTGCTGG...GGACGCCCACTGGGCCTCAACTTGATCTTCTACCCCGTGCCTGTGACTCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp GCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCGGGACCAGTCGAAAAAGTACTTaGCAGCCAGTGGGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: ARSLEQSFPVLHGEPLGTSRKST*QPVGAC
Trigger: ACAAGCCCCCACTGGCTGTCAAGTACTTTTTCGACT...GGTCCCGAGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp CAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCTGCACCAGTGTGGATaGGGTAGAGTTTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QVCPLSGTVISSVAWGASLHQCG*GRVSGL
Trigger: CAGCCCAGAAACTCTACCTCATCCACACTGGTGCAG...AGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp CCTCCGGGCTGGCGGCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACAAGCAACAAAAATCTaGCACTACTTGAAACTGTCT +
Preference number: 4 (lower is better)
Translates to: PPGWRPPLPQFVLGRLDAQATKI*HYLKLS
Trigger: AGACAGTTTCAAGTAGTGTCAGATTTTTGTTGCTTG...TGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GCGGGCACTGCCCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTGACACTAGTGGGGGTACACTTGTaGAGTGCGGCTGCAGTCGTA +
Preference number: 4 (lower is better)
Translates to: AGTAHSTNSRPSNKNLTLVGVHL*SAAAVV
Trigger: TACGACTGCAGCCGCACTGCACAAGTGTACCCCCAC...TAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp AGTCTGAGTCACAGGCACGGGGTAGAAGATCAAGTTGAGGCCCAGTGGGCGTCCGTGATGACCGGGTTCTaGATGTACCAGAAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SLSHRHGVEDQVEAQWASVMTGF*MYQKVR
Trigger: CCTCACCTTCTGGTACATGCAGAACCCGGTCATCAC...GGACGCCCACTGGGCCTCAACTTGATCTTCTACCCCGTGCCTGTGACTCAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp TGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCGGATGTAGCTCTGTGTaGTGGAGGCGAACCACTCAA +
Preference number: 4 (lower is better)
Translates to: CQVCPLSGTVISSVAWGAGCSSV*WRRTTQ
Trigger: TTGAGTGGTTCGCCTCCAGCACACAGAGCTACATCC...GGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp CTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGTCATCCAGAAACTTCTaGAACGTGCCCTTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LGSRTNWTLWSKWVGTVQSSRNF*NVPLVE
Trigger: CTCCACCAAGGGCACGTTGCAGAAGTTTCTGGATGA...CTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GGCGGCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTGTACTTATAAATCTCTaGCATGGCCACATTGGTGTT +
Preference number: 4 (lower is better)
Translates to: GGLLSPSLCLAAWMHGALVLINL*HGHIGV
Trigger: AACACCAATGTGGCCATGGCAGAGATTTATAAGTAC...AAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp AGAAACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCACCAGTGTGGATGAGAGTGGGTGGGCACAGTaGAGGCCGTGCTGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: RNQSKVSSRRAPCTSVDESGWAQ*RPCWAD
Trigger: ATCTGCCCAGCACGGCCTGCACTGTGCCCACCCACT...CTCATCCACACTGGTGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp GGGCACTGCCCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTGACACTACTTGTCCAGGGAGCGGATaGCGATCTCGGGCGTGTTCT +
Preference number: 4 (lower is better)
Translates to: GHCPLYQQPPKQQKSDTTCPGSG*RSRACS
Trigger: AGAACACGCCCGAGATCGCCATCCGCTCCCTGGACA...AGTAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp GGCTGTGTGGGGGTACACTTGTGCAGTGCGGCTGCAGTCGTAGATGGTGAAATTGCTGCTGGCTGGAATTaGTGCAGTCCTGCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: GCVGVHLCSAAAVVDGEIAAGWN*CSPAAR
Trigger: CCTTGCAGCAGGACTGCACCAATTCCAGCCAGCAGC...AATTTCACCATCTACGACTGCAGCCGCACTGCACAAGTGTACCCCCACACAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR CCA 90 bp GTAGATGGTGAAATTGGCCTTGACGATGTTCCGCCCATTGACCCTCACAGACATAAGGCAGGACGGTCATaGCAGGACAGCGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VDGEIGLDDVPPIDPHRHKAGRS*QDSGWG
Trigger: GCCCCAGCCGCTGTCCTGCCATGACCGTCCTGCCTT...ATGTCTGTGAGGGTCAATGGGCGGAACATCGTCAAGGCCAATTTCACCATCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR CCA 90 bp GGGCACTGCCCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTGACACTACTGAACCTTGCAGAGCGTaGGCTCCCGGCCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: GHCPLYQQPPKQQKSDTTEPCRA*APGQCG
Trigger: ACCACATTGGCCGGGAGCCCACGCTCTGCAAGGTTC...AGTAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTTTCCCTCTTCCATGTTaGGCCGGCAGCTCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: QVCPLSGTVISSVAWGASFPLPC*AGSSQE
Trigger: TTCCTGAGAGCTGCCGGCCCAACATGGAAGAGGGAA...AGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTTGCTGCTCCAGCGCGTaGACAAAGACGATGAGGAAG +
Preference number: 4 (lower is better)
Translates to: QVCPLSGTVISSVAWGASCCSSA*TKTMRK
Trigger: CTTCCTCATCGTCTTTGTCCACGCGCTGGAGCAGCA...AGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp GGGGTAGAAGATCAAGTTGAGGCCCAGTGGGCGTCCATTTCTCCCAGCAGCAGCTGTAGCTCTGTGTGCTaGAGGCGAACCACTCAAGGT +
Preference number: 4 (lower is better)
Translates to: GVEDQVEAQWASISPSSSCSSVC*RRTTQG
Trigger: ACCTTGAGTGGTTCGCCTCCAGCACACAGAGCTACA...GCTGCTGCTGGGAGAAATGGACGCCCACTGGGCCTCAACTTGATCTTCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp GGGCACTGCCCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTGACACTACTTCTGCAACGTGCCCTTaGTGGAGAGCAGGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: GHCPLYQQPPKQQKSDTTSATCP*WRAGGS
Trigger: TGACCCGCCTGCTCTCCACCAAGGGCACGTTGCAGA...AGTAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp TCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCGGGACCCCTCCCAGGCAGGCGTCGATGTaGTCTGTCTTGTCGATGTCA +
Preference number: 4 (lower is better)
Translates to: SLEQSFPVLHGEPLGTPPRQASM*SVLSMS
Trigger: TGACATCGACAAGACAGACCACATCGACGCCTGCCT...GGGAGGGGTCCCGAGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp CAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGGTGTTGAACTCATTCTaGTATTTCCTCGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: QRVVSGRNGVGGSLRRQGVLNSF*YFLDSS
Trigger: CGAGGAGTCGAGGAAATACCAGAATGAGTTCAACAC...CCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
3UTR CAA 72 bp CGACAGGCAGCTGGTACAGGCTGTGTGGGGGTACACTaGTGCAGTGCGGCTGCAGTCGTAGATGGTGAAATT +
Preference number: 4 (lower is better)
Translates to: RQAAGTGCVGVH*CSAAAVVDGEI
Trigger: AATTTCACCATCTACGACTGCAGCCGCACTGCACAAGTGTACCCCCACACAGCCTGTACCAGCTGCCTGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505665.5
3UTR CAA 72 bp ATGTTGTCCTCCATCAAAGCCACCACCTGCTCAAACTaGTGCTGCAGTTGTGTCCTCCGGGCCGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: MLSSIKATTCSN*CCSCVLRAVGL
Trigger: CAACCCCACGGCCCGGAGGACACAACTGCAGCACAAGTTTGAGCAGGTGGTGGCTTTGATGGAGGACAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512744.5
CDS-3UTR TCA 90 bp GTCGTAGATGGTGAAATTGGCCTTGACGATGTTCCGCCCATTGACCCTCACAGACTGGGTCAAACTGCATaGCATGGTGCACGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VVDGEIGLDDVPPIDPHRLGQTA*HGARAP
Trigger: GGGAGCCCGTGCACCATGTCATGCAGTTTGACCCAG...TCTGTGAGGGTCAATGGGCGGAACATCGTCAAGGCCAATTTCACCATCTACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR TCA 90 bp GCAGAAACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCACCAGTGTGGATGCCTTTAGTTGGAGGCTaGGCGGGAACACCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: AETNQRSVQGGLPAPVWMPLVGG*AGTPGS
Trigger: AGAGCCAGGTGTTCCCGCTCAGCCTCCAACTAAAGG...CATCCACACTGGTGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTTTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp GGGGTAGAAGATCAAGTTGAGGCCCAGTGGGCGTCCATTTCTCCCAGCAGCAGCGGTTCAGCTCCTTGGTaGGATCTGTCATGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GVEDQVEAQWASISPSSSGSAPW*DLSCLS
Trigger: AGACAGACATGACAGATCTCACCAAGGAGCTGAACC...GCTGCTGCTGGGAGAAATGGACGCCCACTGGGCCTCAACTTGATCTTCTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp GCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGGGAAGTGCTTGTTGTTaGGTAGTGAGGAGAACAAGC +
Preference number: 4 (lower is better)
Translates to: ALGSRTNWTLWSKWVGTVGSACC*VVRRTS
Trigger: GCTTGTTCTCCTCACTACTCAACAACAAGCACTTCC...CACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp AACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCACCAGTGTGGATGAGGTAGCGGGAAGAAGGAGCTaGCGTAACCGGTGTACGTGG +
Preference number: 4 (lower is better)
Translates to: NQSKVSSRRAPCTSVDEVAGRRS*RNRCTW
Trigger: CCACGTACACCGGTTACGGCAGCTCCTTCTTCCCGC...TACCTCATCCACACTGGTGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp AGGTTTGTCCGTAAGGCTTTTATTATAAAGAAGATTCCAGAGTCCCAGCTGCCCCCACGAAGCAGGCGGTaGGCGCAGCTCGGATGGCGG +
Preference number: 4 (lower is better)
Translates to: RFVRKAFIIKKIPESQLPPRSRR*AQLGWR
Trigger: CCGCCATCCGAGCTGCGCGCACCGCCTGCTTCGTGG...GGGCAGCTGGGACTCTGGAATCTTCTTTATAATAAAAGCCTTACGGACAAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp TTGGTAGTTGAAGCAGAAACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCAGTGGCCTTCAGGGGCTaGAGGATGGACAGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: LVVEAETNQRSVQGGLPAVAFRG*RMDSGC
Trigger: GCACCCGCTGTCCATCCTGCAGCCCCTGAAGGCCAC...TGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTTTCTGCTTCAACTACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp GCGGCTGCAGTCGTAGATGGTGAAATTGGCCTTGACGATGTTCCGCCCATTGACTCTGCTGGGTCAAACTaGATGACATGGTGCACGGGC +
Preference number: 4 (lower is better)
Translates to: AAAVVDGEIGLDDVPPIDSAGSN*MTWCTG
Trigger: GCCCGTGCACCATGTCATGCAGTTTGACCCAGCAGA...GTCAATGGGCGGAACATCGTCAAGGCCAATTTCACCATCTACGACTGCAGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR GCA 90 bp TGTGTGGGGGTACACTTGTGCAGTGCGGCTGCAGTCGTAGATGGTGAAATTGGCGGTACACTTGTGCAGTaGGGCTGCAGTCGTAGATGG +
Preference number: 4 (lower is better)
Translates to: CVGVHLCSAAAVVDGEIGGTLVQ*GCSRRW
Trigger: CCATCTACGACTGCAGCCGCACTGCACAAGTGTACC...GCCAATTTCACCATCTACGACTGCAGCCGCACTGCACAAGTGTACCCCCACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR GCA 90 bp TGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCGCAGACAGCTGTACATaGAGATGGACATCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: CQVCPLSGTVISSVAWGAADSCT*RWTSSW
Trigger: CCAACTGGATGTCCATCTGCATGTACAGCTGTCTGC...GGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp CGCTCTGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGTCATCCAGAAACTTCTaGAACGTGCCCTTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: RSARSARSLEQSFPVLHGSSRNF*NVPLVE
Trigger: CTCCACCAAGGGCACGTTGCAGAAGTTTCTGGATGA...CCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCAGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GCGGGCACTGCCCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTGACACTATGGGCATTCATCTCTTaGTCGCTGAGCGGCGTCATG +
Preference number: 4 (lower is better)
Translates to: AGTAHSTNSRPSNKNLTLWAFIS*SLSGVM
Trigger: CATGACGCCGCTCAGCGAGCAAGAGATGAATGCCCA...TAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp AGCTGGTACAGGCTGTGTGGGGGTACACTTGTGCAGTGCGGCTGCAGTCGTAGAAGAAATGCTGCTGGCTaGAATTGGTGCAGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: SWYRLCGGTLVQCGCSRRRNAAG*NWCSPA
Trigger: AGCAGGACTGCACCAATTCCAGCCAGCAGCATTTCT...TCTACGACTGCAGCCGCACTGCACAAGTGTACCCCCACACAGCCTGTACCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR CCA 90 bp GTAGATGGTGAAATTGGCCTTGACGATGTTCCGCCCATTGACCCTCACAGACATGGCTGGGGCCCTCGCTaGCACTGGTCCAGAAATGCT +
Preference number: 4 (lower is better)
Translates to: VDGEIGLDDVPPIDPHRHGWGPR*HWSRNA
Trigger: AGCATTTCTGGACCAGTGCCAGCGAGGGCCCCAGCC...ATGTCTGTGAGGGTCAATGGGCGGAACATCGTCAAGGCCAATTTCACCATCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR CCA 90 bp GCTCTGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGACATTCTGCACCATGTaGAAACGCTCACCAGCCACT +
Preference number: 4 (lower is better)
Translates to: ALPGLPALWNSHFQCCMGTFCTM*KRSPAT
Trigger: AGTGGCTGGTGAGCGTTTCCACATGGTGCAGAATGT...CCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp GCGGGCACTGCCCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTGACACTATGCTGCTCCAGCGCGTaGACAAAGACGATGAGGAAG +
Preference number: 4 (lower is better)
Translates to: AGTAHSTNSRPSNKNLTLCCSSA*TKTMRK
Trigger: CTTCCTCATCGTCTTTGTCCACGCGCTGGAGCAGCA...TAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp AACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCACCAGTGTGGATGAGGTATCAGGTTCCGGGGCTTaGCCTCGATGTTCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: NQSKVSSRRAPCTSVDEVSGSGA*PRCSPA
Trigger: TGCGGGAGAACATCGAGGCCAAGCCCCGGAACCTGA...TACCTCATCCACACTGGTGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp CAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTGGTCTGCCCGCTCTCTaGAACAGTCATTTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: QVCPLSGTVISSVAWGASGLPAL*NSHFQC
Trigger: ACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACC...AGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR CCA 90 bp GCAGAAACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCACCAGTGTGGATGACAGAGGGTCGTTTCTaGCAGGAACGGAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: AETNQRSVQGGLPAPVWMTEGRF*QERSGW
Trigger: CCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGT...CATCCACACTGGTGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTTTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GCGGGCACTGCCCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTGACACTAGAAACACAGGAGTGCTaGTGGCTGCACCAGAAACAG +
Preference number: 4 (lower is better)
Translates to: AGTAHSTNSRPSNKNLTLETQEC*WLHQKQ
Trigger: CTGTTTCTGGTGCAGCCAGCAGCACTCCTGTGTTTC...TAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp CCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGAAGACGATGAGGAAGTaGTTGTTGTTGAGTAGTGAG +
Preference number: 4 (lower is better)
Translates to: PQRVVSGRNGVGGSLRRQKTMRK*LLLSSE
Trigger: CTCACTACTCAACAACAAGCACTTCCTCATCGTCTT...CTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp TTGAACTCATTCTGGTATTTCCTCGACTCCTCGGCCAGATGGGCATTCATCTCTCCGGGAGCACCTTCTTaGGATGGCTCTGCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: LNSFWYFLDSSARWAFISPGAPS*DGSAGE
Trigger: CTCACCGGCAGAGCCATCGCAAGAAGGTGCTCCCGG...AGAGATGAATGCCCATCTGGCCGAGGAGTCGAGGAAATACCAGAATGAGTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512744.5
CDS-3UTR GCA 90 bp AGAAACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCACCAGTGTGGATGAGGCGTCGATGAAGGCCTaGGCGATGACTGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RNQSKVSSRRAPCTSVDEASMKA*AMTERQ
Trigger: CTGCCTTTCAGTCATCGCGCAGGCCTTCATCGACGC...CTCATCCACACTGGTGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GGGCACTGCCCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTGACACTACTTGGTTGGCGAATCCTTaGCCAGCTGCAGGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: GHCPLYQQPPKQQKSDTTWLANP*PAAGQR
Trigger: TCTCTGACCTGCAGCTGGGCAAGGATTCGCCAACCA...AGTAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp GATCTGCTTGTAGTAGCGCTGCACGATCTTCCGGTACTCAGGAATCTCCTTGGCTCCATGCCACAGCCCTaGAAGGACACGTTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: DLLVVALHDLPVLRNLLGSMPQP*KDTFRF
Trigger: GAACCTGAACGTGTCCTTCCAGGGCTGTGGCATGGA...GCCAAGGAGATTCCTGAGTACCGGAAGATCGTGCAGCGCTACTACAAGCAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512744.5
CDS-3UTR CCA 90 bp GCGGGCACTGCCCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTGACACTAGGAGAGGAAGGCTGTTaGTCTTCCAGATGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: AGTAHSTNSRPSNKNLTLGEEGC*SSRCVG
Trigger: CCCTACACATCTGGAAGACCAACAGCCTTCCTCTCC...TAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp AGAAACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCACCAGTGTGGATGAGGGCAGCAGGACCAACTaGACGTTGTGGAGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: RNQSKVSSRRAPCTSVDEGSRTN*TLWSKW
Trigger: CCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCC...CTCATCCACACTGGTGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GTGAAATTGGCCTTGACGATGTTCCGCCCATTGACCCTCACAGACATCTCAACAGCTGGCTGGAATTGGTaGAGTCCTGCTGCAAGGTGC +
Preference number: 4 (lower is better)
Translates to: VKLALTMFRPLTLTDISTAGWNW*SPAARC
Trigger: GCACCTTGCAGCAGGACTGCACCAATTCCAGCCAGC...TGTTGAGATGTCTGTGAGGGTCAATGGGCGGAACATCGTCAAGGCCAATTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR GCA 90 bp GTGAAATTGGCCTTGACGATGTTCCGCCCATTGACCCTCACAGACATCTCAACAGTGGGGGTACACTTGTaGAGTGCGGCTGCAGTCGTA +
Preference number: 4 (lower is better)
Translates to: VKLALTMFRPLTLTDISTVGVHL*SAAAVV
Trigger: TACGACTGCAGCCGCACTGCACAAGTGTACCCCCAC...TGTTGAGATGTCTGTGAGGGTCAATGGGCGGAACATCGTCAAGGCCAATTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR GCA 90 bp CCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGTACTTATAAATCTCTaGCATGGCCACATTGGTGTT +
Preference number: 4 (lower is better)
Translates to: PQRVVSGRNGVGGSLRRQVLINL*HGHIGV
Trigger: AACACCAATGTGGCCATGGCAGAGATTTATAAGTAC...CTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR GCA 90 bp AGAAACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCACCAGTGTGGATGAGTGCTCAAACTTGTGCTaGAGTTGTGTCCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: RNQSKVSSRRAPCTSVDECSNLC*SCVLRA
Trigger: GGCCCGGAGGACACAACTGCAGCACAAGTTTGAGCA...CTCATCCACACTGGTGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp AACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCACCAGTGTGGATGAGGTAAGAAGCCCTGGTAGATaGACCCGCACACGACTACCA +
Preference number: 4 (lower is better)
Translates to: NQSKVSSRRAPCTSVDEVRSPGR*TRTRLP
Trigger: TGGTAGTCGTGTGCGGGTCCATCTACCAGGGCTTCT...TACCTCATCCACACTGGTGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp AGGTTTGTCCGTAAGGCTTTTATTATAAAGAAGATTCCAGAGTCCCAGCTGCCCGCCTGGGAGCTGCCCTaGGAGTTGAGGGTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RFVRKAFIIKKIPESQLPAWELP*ELRVWE
Trigger: CTCCCAGACCCTCAACTCCCAGGGCAGCTCCCAGGC...GGGCAGCTGGGACTCTGGAATCTTCTTTATAATAAAAGCCTTACGGACAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp CTTGGCGTACTTATAAATCTCTGCCATGGCCACATTGGTGTTGAACTCATTCTGCCCCCAGTTTGTGCTTaGCCGCCTGGATGCACGGGG +
Preference number: 4 (lower is better)
Translates to: LGVLINLCHGHIGVELILPPVCA*PPGCTG
Trigger: CCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGG...CAGAATGAGTTCAACACCAATGTGGCCATGGCAGAGATTTATAAGTACGCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512744.5
CDS-3UTR CCA 90 bp GTCGTAGATGGTGAAATTGGCCTTGACGATGTTCCGCCCATTGACCCTCACAGAGTGGTTGGGTACTCCTaGCGCACATCGATCTCGGAA +
Preference number: 4 (lower is better)
Translates to: VVDGEIGLDDVPPIDPHRVVGYS*RTSISE
Trigger: TTCCGAGATCGATGTGCGCCAGGAGTACCCAACCAC...TCTGTGAGGGTCAATGGGCGGAACATCGTCAAGGCCAATTTCACCATCTACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR GCA 90 bp TTGGTAGTTGAAGCAGAAACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCACGCCTGCTCACCACCTaGATGCTCTCGTTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LVVEAETNQRSVQGGLPARLLTT*MLSFRL
Trigger: CAACCTGAACGAGAGCATGCAGGTGGTGAGCAGGCG...TGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTTTCTGCTTCAACTACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp GCTGCAGTCGTAGATGGTGAAATTGGCCTTGACGATGTTCCGCCCATTGACCCTAAGGTAACCGGAGTCTaGTGGGTCAAACTGCATGAC +
Preference number: 4 (lower is better)
Translates to: AAVVDGEIGLDDVPPIDPKVTGV*WVKLHD
Trigger: GTCATGCAGTTTGACCCAGCAGACTCCGGTTACCTT...AGGGTCAATGGGCGGAACATCGTCAAGGCCAATTTCACCATCTACGACTGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR CCA 90 bp AGGTTTGTCCGTAAGGCTTTTATTATAAAGAAGATTCCAGAGTCCCAGCTGCCCAGTTGTTGGTGGGCGTaGGCGAGGGGAACCGACGCT +
Preference number: 4 (lower is better)
Translates to: RFVRKAFIIKKIPESQLPSCWWA*ARGTDA
Trigger: AGCGTCGGTTCCCCTCGCCCACGCCCACCAACAACT...GGGCAGCTGGGACTCTGGAATCTTCTTTATAATAAAAGCCTTACGGACAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp AGTGCGGCTGCAGTCGTAGATGGTGAAATTGGCCTTGACGATGTTCCGCCCATTGTAACCGGAGTCTGCTaGGTCAAACTGCATGACATG +
Preference number: 4 (lower is better)
Translates to: SAAAVVDGEIGLDDVPPIVTGVC*VKLHDM
Trigger: CATGTCATGCAGTTTGACCCAGCAGACTCCGGTTAC...AATGGGCGGAACATCGTCAAGGCCAATTTCACCATCTACGACTGCAGCCGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR CCA 90 bp AGGTTTGTCCGTAAGGCTTTTATTATAAAGAAGATTCCAGAGTCCCAGCTGCCCAGTCCTGAGGGCTCGTaGGGTTTGGTGAGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: RFVRKAFIIKKIPESQLPSPEGS*GLVRPR
Trigger: GCGAGGCCTCACCAAACCCCACGAGCCCTCAGGACT...GGGCAGCTGGGACTCTGGAATCTTCTTTATAATAAAAGCCTTACGGACAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp GCGGGCACTGCCCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTGACACTAGCGGCCGATACCTCTTaGCGTACTTATAAATCTCTG +
Preference number: 4 (lower is better)
Translates to: AGTAHSTNSRPSNKNLTLAADTS*RTYKSL
Trigger: CAGAGATTTATAAGTACGCCAAGAGGTATCGGCCGC...TAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR TCA 90 bp AGGTTTGTCCGTAAGGCTTTTATTATAAAGAAGATTCCAGAGTCCCAGCTGCCCCTGGGTCAAACTGCATaGCATGGTGCACGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RFVRKAFIIKKIPESQLPLGQTA*HGARAP
Trigger: GGGAGCCCGTGCACCATGTCATGCAGTTTGACCCAG...GGGCAGCTGGGACTCTGGAATCTTCTTTATAATAAAAGCCTTACGGACAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp AGGTTTGTCCGTAAGGCTTTTATTATAAAGAAGATTCCAGAGTCCCAGCTGCCCACTCCAGGAAGGGGATaGCCTGGCTGCGGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: RFVRKAFIIKKIPESQLPTPGRG*PGCGSA
Trigger: AGCTGAACCGCAGCCAGGGCATCCCCTTCCTGGAGT...GGGCAGCTGGGACTCTGGAATCTTCTTTATAATAAAAGCCTTACGGACAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp AGTGGAGATAACATTTTGGTAGTTGAAGCAGAAACCAATCAAAGGTCAGTTCAAGCGCCAGGGGCGCTCTaGCAGGTCTGCCCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SGDNILVVEAETNQRSVQAPGAL*QVCPLS
Trigger: AGAGAGCGGGCAGACCTGGCAGAGCGCCCCTGGCGC...TTGAACTGACCTTTGATTGGTTTCTGCTTCAACTACCAAAATGTTATCTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp AACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCACCAGTGTGGATGAGGTAGTAACCGGAGTCTGCTaGGTCAAACTGCATGACATG +
Preference number: 4 (lower is better)
Translates to: NQSKVSSRRAPCTSVDEVVTGVC*VKLHDM
Trigger: CATGTCATGCAGTTTGACCCAGCAGACTCCGGTTAC...TACCTCATCCACACTGGTGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp AACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCACCAGTGTGGATGAGGTAACTCAGGAATCTCCTTaGCGTAGAGGAGCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: NQSKVSSRRAPCTSVDEVTQESP*RRGACW
Trigger: CCAACAAGCTCCTCTACGCCAAGGAGATTCCTGAGT...TACCTCATCCACACTGGTGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp AGGTTTGTCCGTAAGGCTTTTATTATAAAGAAGATTCCAGAGTCCCAGCTGCCCAGCCAGTCCCAACACTaGCTGAGTTGGCTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: RFVRKAFIIKKIPESQLPSQSQH*LSWLRG
Trigger: CCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCT...GGGCAGCTGGGACTCTGGAATCTTCTTTATAATAAAAGCCTTACGGACAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000504689.1
CDS-3UTR TCA 90 bp AGGTTTGTCCGTAAGGCTTTTATTATAAAGAAGATTCCAGAGTCCCAGCTGCCCTCATCTCTTGCTCGCTaGGCGGCGTCATGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RFVRKAFIIKKIPESQLPSSLAR*AASCPG
Trigger: TCCAGGACATGACGCCGCTCAGCGAGCAAGAGATGA...GGGCAGCTGGGACTCTGGAATCTTCTTTATAATAAAAGCCTTACGGACAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000504689.1
CDS-3UTR TCA 90 bp TGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCCAAGCAACAAAAATCTaGCACTACTTGAAACTGTCT +
Preference number: 4 (lower is better)
Translates to: CQVCPLSGTVISSVAWGAQATKI*HYLKLS
Trigger: AGACAGTTTCAAGTAGTGTCAGATTTTTGTTGCTTG...GGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp TTGAACTCATTCTGGTATTTCCTCGACTCCTCGGCCAGATGGGCATTCATCTCTTGTAGCTCTGTGTGCTaGAGGCGAACCACTCAAGGT +
Preference number: 4 (lower is better)
Translates to: LNSFWYFLDSSARWAFISCSSVC*RRTTQG
Trigger: ACCTTGAGTGGTTCGCCTCCAGCACACAGAGCTACA...AGAGATGAATGCCCATCTGGCCGAGGAGTCGAGGAAATACCAGAATGAGTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512744.5
CDS-3UTR TCA 90 bp AGTGGAGATAACATTTTGGTAGTTGAAGCAGAAACCAATCAAAGGTCAGTTCAATGTTGTAGTTGTCCGTaGGGCGCCGCGGGTGCTCGC +
Preference number: 4 (lower is better)
Translates to: SGDNILVVEAETNQRSVQCCSCP*GAAGAR
Trigger: GCGAGCACCCGCGGCGCCTCACGGACAACTACAACA...TTGAACTGACCTTTGATTGGTTTCTGCTTCAACTACCAAAATGTTATCTCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR TCA 90 bp AGAAACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCACCAGTGTGGATGAGTACTCAGAATGGCCTTaGACAGGTCATCCAGAAACT +
Preference number: 4 (lower is better)
Translates to: RNQSKVSSRRAPCTSVDEYSEWP*TGHPET
Trigger: AGTTTCTGGATGACCTGTTCAAGGCCATTCTGAGTA...CTCATCCACACTGGTGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp CTTGGCGTACTTATAAATCTCTGCCATGGCCACATTGGTGTTGAACTCATTCTGGCAAAGTCCTTCTGCTaGTCCAGCGCGTGGACAAAG +
Preference number: 4 (lower is better)
Translates to: LGVLINLCHGHIGVELILAKSFC*SSAWTK
Trigger: CTTTGTCCACGCGCTGGAGCAGCAGAAGGACTTTGC...CAGAATGAGTTCAACACCAATGTGGCCATGGCAGAGATTTATAAGTACGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512744.5
CDS-3UTR GCA 90 bp AGGTTTGTCCGTAAGGCTTTTATTATAAAGAAGATTCCAGAGTCCCAGCTGCCCTGGGCATTCATCTCTTaGTCGCTGAGCGGCGTCATG +
Preference number: 4 (lower is better)
Translates to: RFVRKAFIIKKIPESQLPWAFIS*SLSGVM
Trigger: CATGACGCCGCTCAGCGAGCAAGAGATGAATGCCCA...GGGCAGCTGGGACTCTGGAATCTTCTTTATAATAAAAGCCTTACGGACAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000504689.1
CDS-3UTR CCA 90 bp AGTGGAGATAACATTTTGGTAGTTGAAGCAGAAACCAATCAAAGGTCAGTTCAACCAGGGCGAAGTTGTTaGTGGGCGTGGGCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SGDNILVVEAETNQRSVQPGRSC*WAWARG
Trigger: TCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGG...TTGAACTGACCTTTGATTGGTTTCTGCTTCAACTACCAAAATGTTATCTCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp AAAGTGGTGCTATCTTTAGAAACACTTTCAGCAAGATCAAGTAGCCCAGCTACATCTGCAACGTGCCCTTaGTGGAGAGCAGGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: KVVLSLETLSARSSSPATSATCP*WRAGGS
Trigger: TGACCCGCCTGCTCTCCACCAAGGGCACGTTGCAGA...TGTAGCTGGGCTACTTGATCTTGCTGAAAGTGTTTCTAAAGATAGCACCACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp GATCTGCTTGTAGTAGCGCTGCACGATCTTCCGGTACTCAGGAATCTCCTTGGCGTACTTATAAATCTCTaGCATGGCCACATTGGTGTT +
Preference number: 4 (lower is better)
Translates to: DLLVVALHDLPVLRNLLGVLINL*HGHIGV
Trigger: AACACCAATGTGGCCATGGCAGAGATTTATAAGTAC...GCCAAGGAGATTCCTGAGTACCGGAAGATCGTGCAGCGCTACTACAAGCAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512744.5
CDS-3UTR GCA 90 bp AGGTTTGTCCGTAAGGCTTTTATTATAAAGAAGATTCCAGAGTCCCAGCTGCCCTTGGAAACACAGGAGTaGTGCTGGCTGCACCAGAAA +
Preference number: 4 (lower is better)
Translates to: RFVRKAFIIKKIPESQLPLETQE*CWLHQK
Trigger: TTTCTGGTGCAGCCAGCAGCACTCCTGTGTTTCCAA...GGGCAGCTGGGACTCTGGAATCTTCTTTATAATAAAAGCCTTACGGACAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp AGGTTTGTCCGTAAGGCTTTTATTATAAAGAAGATTCCAGAGTCCCAGCTGCCCGAGCCCTTGTTGATTTaGTGCTTGATGGCACACAGC +
Preference number: 4 (lower is better)
Translates to: RFVRKAFIIKKIPESQLPEPLLI*CLMAHS
Trigger: GCTGTGTGCCATCAAGCAGCAAATCAACAAGGGCTC...GGGCAGCTGGGACTCTGGAATCTTCTTTATAATAAAAGCCTTACGGACAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp AAAGTGGTGCTATCTTTAGAAACACTTTCAGCAAGATCAAGTAGCCCAGCTACATGCTCAAACTTGTGCTaGAGTTGTGTCCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: KVVLSLETLSARSSSPATCSNLC*SCVLRA
Trigger: GGCCCGGAGGACACAACTGCAGCACAAGTTTGAGCA...TGTAGCTGGGCTACTTGATCTTGCTGAAAGTGTTTCTAAAGATAGCACCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR GCA 90 bp AAAGTGGTGCTATCTTTAGAAACACTTTCAGCAAGATCAAGTAGCCCAGCTACATCAAGGAGGGCTCCCTaGACCAGTGTGGATGAGGTA +
Preference number: 4 (lower is better)
Translates to: KVVLSLETLSARSSSPATSRRAP*TSVDEV
Trigger: TACCTCATCCACACTGGTGCAGGGAGCCCTCCTTGA...TGTAGCTGGGCTACTTGATCTTGCTGAAAGTGTTTCTAAAGATAGCACCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp AAAGTGGTGCTATCTTTAGAAACACTTTCAGCAAGATCAAGTAGCCCAGCTACATGGTGCAGGCGATGCTaGTATCTGTGCGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: KVVLSLETLSARSSSPATWCRRC*YLCASA
Trigger: AGCTGATGCGCACAGATACCAGCATCGCCTGCACCA...TGTAGCTGGGCTACTTGATCTTGCTGAAAGTGTTTCTAAAGATAGCACCACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp AAAGTGGTGCTATCTTTAGAAACACTTTCAGCAAGATCAAGTAGCCCAGCTACAACCTGCTCAAACTTGTaGTGCAGTTGTGTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: KVVLSLETLSARSSSPATTCSNL*CSCVLR
Trigger: CCGGAGGACACAACTGCAGCACAAGTTTGAGCAGGT...TGTAGCTGGGCTACTTGATCTTGCTGAAAGTGTTTCTAAAGATAGCACCACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp AGGTTTGTCCGTAAGGCTTTTATTATAAAGAAGATTCCAGAGTCCCAGCTGCCCGCGGCCGATACCTCTTaGCGTACTTATAAATCTCTG +
Preference number: 4 (lower is better)
Translates to: RFVRKAFIIKKIPESQLPAADTS*RTYKSL
Trigger: CAGAGATTTATAAGTACGCCAAGAGGTATCGGCCGC...GGGCAGCTGGGACTCTGGAATCTTCTTTATAATAAAAGCCTTACGGACAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000504689.1
CDS-3UTR GCA 90 bp AGTGGAGATAACATTTTGGTAGTTGAAGCAGAAACCAATCAAAGGTCAGTTCAATGGGCATTCATCTCTTaGTCGCTGAGCGGCGTCATG +
Preference number: 4 (lower is better)
Translates to: SGDNILVVEAETNQRSVQWAFIS*SLSGVM
Trigger: CATGACGCCGCTCAGCGAGCAAGAGATGAATGCCCA...TTGAACTGACCTTTGATTGGTTTCTGCTTCAACTACCAAAATGTTATCTCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp AGTGGAGATAACATTTTGGTAGTTGAAGCAGAAACCAATCAAAGGTCAGTTCAACTGGTACAGGCTGTGTaGGGGTACACTTGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SGDNILVVEAETNQRSVQLVQAV*GYTCAV
Trigger: CACTGCACAAGTGTACCCCCACACAGCCTGTACCAG...TTGAACTGACCTTTGATTGGTTTCTGCTTCAACTACCAAAATGTTATCTCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR GCA 90 bp AGTGGAGATAACATTTTGGTAGTTGAAGCAGAAACCAATCAAAGGTCAGTTCAAAGTCATTTCCAGTGTTaGATGGGGAGCCTCTCGGGA +
Preference number: 4 (lower is better)
Translates to: SGDNILVVEAETNQRSVQSHFQC*MGSLSG
Trigger: TCCCGAGAGGCTCCCCATGCAACACTGGAAATGACT...TTGAACTGACCTTTGATTGGTTTCTGCTTCAACTACCAAAATGTTATCTCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CCA 90 bp AGTGGAGATAACATTTTGGTAGTTGAAGCAGAAACCAATCAAAGGTCAGTTCAAAGTGTGGCGATGGTCTaGTTGAAGTTCCCTACCTGG +
Preference number: 4 (lower is better)
Translates to: SGDNILVVEAETNQRSVQSVAMV*LKFPTW
Trigger: CCAGGTAGGGAACTTCAACCAGACCATCGCCACACT...TTGAACTGACCTTTGATTGGTTTCTGCTTCAACTACCAAAATGTTATCTCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CCA 90 bp AGTGGAGATAACATTTTGGTAGTTGAAGCAGAAACCAATCAAAGGTCAGTTCAAAAAGGGAGGAACACTTaGGGAAGAAGGTGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: SGDNILVVEAETNQRSVQKGRNT*GRRCGS
Trigger: TGACCCGCACCTTCTTCCCCAAGTGTTCCTCCCTTT...TTGAACTGACCTTTGATTGGTTTCTGCTTCAACTACCAAAATGTTATCTCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS TCA 90 bp AGGCGCCGCGGGTGCTCGCACGAGGCCTGCGGCAGCTGCGGAGCGTaGCACAGCGGGCTGTCGGGCACCGGGCCCACGGCCGCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: RRRGCSHEACGSCGA*HSGLSGTGPTAASA
Trigger: GGCCGAGGCGGCCGTGGGCCCGGTGCCCGACAGCCCGCTGTGTCACGCTCCGCAGCTGCCGCAGGCCTCGTGCGAGCACCCGCGGCGCCT
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 90 bp CCGGCGCCGTGGGGCAGGCAGATGCGCGCCAGCAGGCTCCGCGCCTaGCTCTCCTTGTCGCCCGCGCGCGCCTCGCTGTTGAGCGCCAGG +
Preference number: 5 (lower is better)
Translates to: PAPWGRQMRASRLRA*LSLSPARASLLSAR
Trigger: CCTGGCGCTCAACAGCGAGGCGCGCGCGGGCGACAAGGAGAGCCAGGCGCGGAGCCTGCTGGCGCGCATCTGCCTGCCCCACGGCGCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS TCA 90 bp CGTTCGGGTGGTTGGCCGCCACGTTCAGCATGCTGGGGAACACCGTaGCGGGCTCGGCGGGCGGCGCGGCGGGCGGGAAGCGCACGGCCA +
Preference number: 5 (lower is better)
Translates to: RSGGWPPRSACWGTP*RARRAARRAGSARP
Trigger: TGGCCGTGCGCTTCCCGCCCGCCGCGCCGCCCGCCGAGCCCGTCACGGTGTTCCCCAGCATGCTGAACGTGGCGGCCAACCACCCGAACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS TCA 90 bp GGCTCCGCGCCTGGCTCTCCTTGTCGCCCGCGCGCGCCTCGCTGTTaGGCGCCAGGTACGCGTAGGACTGTGCACCCGGCGGCGGGTCGG +
Preference number: 5 (lower is better)
Translates to: GSAPGSPCRPRAPRC*APGTRRTVHPAAGR
Trigger: CCGACCCGCCGCCGGGTGCACAGTCCTACGCGTACCTGGCGCTCAACAGCGAGGCGCGCGCGGGCGACAAGGAGAGCCAGGCGCGGAGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 90 bp AGGAGCTGCCGTAACCGGTGTACGTGGCGCCCACGAGCAGGCGGCTaGCCCCCGCGCCCGCGGCGGGAGGCAGAACTAGCCCCACGGTGG +
Preference number: 5 (lower is better)
Translates to: RSCRNRCTWRPRAGG*PPRPRREAELAPRW
Trigger: CCACCGTGGGGCTAGTTCTGCCTCCCGCCGCGGGCGCGGGGGGCAGCCGCCTGCTCGTGGGCGCCACGTACACCGGTTACGGCAGCTCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 90 bp ACACGGTCCCCGCCGCGCCGTCCAGGGCGAAGTTGTTGGTGGGCGTaGGCGAGGGGAACCGACGCTGGATCTCCAGGGCGCCGGCCCGCG +
Preference number: 5 (lower is better)
Translates to: TRSPPRRPGRSCWWA*ARGTDAGSPGRRPA
Trigger: CGCGGGCCGGCGCCCTGGAGATCCAGCGTCGGTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCGCGGCGGGGACCGTGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 90 bp CGTCGGGCGCCGGTTCCACGAAGCAGGCGGTGCGCGCAGCTCGGATaGCGGCTCGCACGTCGGCGAAGCGGAAGGCGCAGAGTGCGGCCG +
Preference number: 5 (lower is better)
Translates to: RRAPVPRSRRCAQLG*RLARRRSGRRRVRP
Trigger: CGGCCGCACTCTGCGCCTTCCGCTTCGCCGACGTGCGAGCCGCCATCCGAGCTGCGCGCACCGCCTGCTTCGTGGAACCGGCGCCCGACG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 90 bp TCCAGGGAGTGGACCAGGGGCAGCTGTGGGAGGAAGGCAGGCGTTTaGGCCTCGGGCCAGCCCCCGGGAGTGTGCGTGCTGGGCGGGCCG +
Preference number: 5 (lower is better)
Translates to: SREWTRGSCGRKAGV*ASGQPPGVCVLGGP
Trigger: CGGCCCGCCCAGCACGCACACTCCCGGGGGCTGGCCCGAGGCCCAAACGCCTGCCTTCCTCCCACAGCTGCCCCTGGTCCACTCCCTGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515191.1
CDS GCA 90 bp GCCCGCGCGCGCCTCGCTGTTGAGCGCCAGGTACGCGTAGGACTGTaGACCCGGCGGCGGGTCGGACGGGTGCAGGAAGGCGCTCACGAA +
Preference number: 5 (lower is better)
Translates to: ARARLAVERQVRVGL*TRRRVGRVQEGAHE
Trigger: TTCGTGAGCGCCTTCCTGCACCCGTCCGACCCGCCGCCGGGTGCACAGTCCTACGCGTACCTGGCGCTCAACAGCGAGGCGCGCGCGGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 90 bp CCAGGTACACGGTCCCCGCCGCGCCGTCCAGGGCGAAGTTGTTGGTaGGCGTGGGCGAGGGGAACCGACGCTGGATCTCCAGGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: PGTRSPPRRPGRSCW*AWARGTDAGSPGRR
Trigger: CCGGCGCCCTGGAGATCCAGCGTCGGTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCGCGGCGGGGACCGTGTACCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 90 bp CCGCCAGGTACACGGTCCCCGCCGCGCCGTCCAGGGCGAAGTTGTTaGTGGGCGTGGGCGAGGGGAACCGACGCTGGATCTCCAGGGCGC +
Preference number: 5 (lower is better)
Translates to: PPGTRSPPRRPGRSC*WAWARGTDAGSPGR
Trigger: GCGCCCTGGAGATCCAGCGTCGGTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCGCGGCGGGGACCGTGTACCTGGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 90 bp GGACCCCTGGGGCCGCTCGAAGACAGCAAAGAGCCGCTCCCGGGCTaGGAAGACCGACACCAGGCGGCTGTAGAGGTCGCCGCGGCCCGC +
Preference number: 5 (lower is better)
Translates to: GPLGPLEDSKEPLPG*EDRHQAAVEVAAAR
Trigger: GCGGGCCGCGGCGACCTCTACAGCCGCCTGGTGTCGGTCTTCCCAGCCCGGGAGCGGCTCTTTGCTGTCTTCGAGCGGCCCCAGGGGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS TCA 90 bp CCGCGCCGCCCGCGCACTGCAAGCCCAACTGGATGTAGGACTCGGTaGGCTTCTTGGCGTCGCCGCCGGCGCCGTGGGGCAGGCAGATGC +
Preference number: 5 (lower is better)
Translates to: PRRPRTASPTGCRTR*ASWRRRRRRGAGRC
Trigger: GCATCTGCCTGCCCCACGGCGCCGGCGGCGACGCCAAGAAGCTCACCGAGTCCTACATCCAGTTGGGCTTGCAGTGCGCGGGCGGCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS TCA 90 bp GGCCCTGGCCGGGGTCCAGCTGCAGGATCTTGTTGTAGTTGTCCGTaGGGCGCCGCGGGTGCTCGCACGAGGCCTGCGGCAGCTGCGGAG +
Preference number: 5 (lower is better)
Translates to: GPGRGPAAGSCCSCP*GAAGARTRPAAAAE
Trigger: CTCCGCAGCTGCCGCAGGCCTCGTGCGAGCACCCGCGGCGCCTCACGGACAACTACAACAAGATCCTGCAGCTGGACCCCGGCCAGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 90 bp CCCGCGGCGGGAGGCAGAACTAGCCCCACGGTGGACGCGTTCGGGTaGTTGGCCGCCACGTTCAGCATGCTGGGGAACACCGTGACGGGC +
Preference number: 5 (lower is better)
Translates to: PAAGGRTSPTVDAFG*LAATFSMLGNTVTG
Trigger: GCCCGTCACGGTGTTCCCCAGCATGCTGAACGTGGCGGCCAACCACCCGAACGCGTCCACCGTGGGGCTAGTTCTGCCTCCCGCCGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 90 bp GGCCCGGGGCGCGGAACACGGGCGTGGCCTTCAGGGGCTGCAGGATaGACAGCGGGTGCTGCAGGTGAGCAGCTCCACAGTCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: GPGRGTRAWPSGAAG*TAGAAGEQLHSPAA
Trigger: AGCAGCTGGACTGTGGAGCTGCTCACCTGCAGCACCCGCTGTCCATCCTGCAGCCCCTGAAGGCCACGCCCGTGTTCCGCGCCCCGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505237.2
CDS-3UTR CAA 90 bp CAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACTGGTGCCCCCGGCCTaGGGGCCCATGGTAGGCTCC +
Preference number: 5 (lower is better)
Translates to: QSQHWLSWLRGARMAHRPLVPPA*GPMVGS
Trigger: GGAGCCTACCATGGGCCCCAAGGCCGGGGGCACCAG...TGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp CCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGCTCCGGGCCGTGGGGTaGGCCTCCAGCGCGGCCATG +
Preference number: 5 (lower is better)
Translates to: PPLPQFVLGRLDARGSWQLRAVG*ASSAAM
Trigger: CATGGCCGCGCTGGAGGCCAACCCCACGGCCCGGAG...CTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS GCA 90 bp TGGAGCTGGATGTTGAGCTTGCGCTCACAGGCCGGTCCCGTGCCCTaGACCACGCTGTCGAGCACCGCCACCACGTCGGGCGCCGGTTCC +
Preference number: 5 (lower is better)
Translates to: WSWMLSLRSQAGPVP*TTLSSTATTSGAGS
Trigger: GGAACCGGCGCCCGACGTGGTGGCGGTGCTCGACAGCGTGGTGCAGGGCACGGGACCGGCCTGTGAGCGCAAGCTCAACATCCAGCTCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS TCA 90 bp TGCAGAGGCCCCCGCAGGCGGCAGCCATCACTCCACATGCACAGGTaGCCCAGGTCTTCGCGGCCCAGGCACTGGGAACAGTCGGGGCTG +
Preference number: 5 (lower is better)
Translates to: CRGPRRRQPSLHMHR*PRSSRPRHWEQSGL
Trigger: CAGCCCCGACTGTTCCCAGTGCCTGGGCCGCGAAGACCTGGGTCACCTGTGCATGTGGAGTGATGGCTGCCGCCTGCGGGGGCCTCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505505.1
CDS CCA 90 bp ACCAGCCGCAGTAGGCGTCCGCCGCACCCACGCAGTCCCCACAGGTaGAGTGCACGTTGCAGGCGGCGACCTTCACCCTGGCCATCTGGT +
Preference number: 5 (lower is better)
Translates to: TSRSRRPPHPRSPHR*SARCRRRPSPWPSG
Trigger: ACCAGATGGCCAGGGTGAAGGTCGCCGCCTGCAACGTGCACTCCACCTGTGGGGACTGCGTGGGTGCGGCGGACGCCTACTGCGGCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000505237.2
ENST00000505665.5
CDS CCA 90 bp CGGAAGGCAGGACGGTCATGGCAGGACAGCGGCTGGGGCCCTCGCTaGCACTGGTCCAGAAATGCTGCTGGCGCGTCTCCAGGGCACACC +
Preference number: 5 (lower is better)
Translates to: RKAGRSWQDSGWGPR*HWSRNAAGASPGHT
Trigger: GGTGTGCCCTGGAGACGCGCCAGCAGCATTTCTGGACCAGTGCCAGCGAGGGCCCCAGCCGCTGTCCTGCCATGACCGTCCTGCCTTCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505237.2
CDS-3UTR CAA 90 bp CAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCATCCAGGGCGAAGTTGTaGGTGGGCGTGGGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: QSQHWLSWLRGARMAHRPSRAKL*VGVGEG
Trigger: CCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGA...TGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp CCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGACTGGCGCTGATGCGTaGCTCAGGGCCCCGGGGGAC +
Preference number: 5 (lower is better)
Translates to: PAWPIGHRGSFLAGTEWVTGADA*LRAPGD
Trigger: GTCCCCCGGGGCCCTGAGCAACGCATCAGCGCCAGT...CACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp CCTCCGGGCTGGCGGCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCATCCCCCAGTTTGTGCTaGGCCGCCTGGATGCACGGG +
Preference number: 5 (lower is better)
Translates to: PPGWRPPLPQFVLGRLDASPSLC*AAWMHG
Trigger: CCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGA...TGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp GGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGACCAACACTGGCTGAGTaGGCTGCGAGGGGCCCGCAT +
Preference number: 5 (lower is better)
Translates to: GCEGPAWPIGHRGSFLAGPTLAE*AARGPH
Trigger: ATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGG...TCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS TCA 90 bp GCTCACAGGCCACACCACCAATCCACACGCCGTGGGCCACGTCACTaGGCCGCCGGCCCAGGTTCCTTCCTCGGATGGTCAGCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: AHRPHHQSTRRGPRH*AAGPGSFLGWSAGS
Trigger: GGACCCTGCTGACCATCCGAGGAAGGAACCTGGGCCGGCGGCTCAGTGACGTGGCCCACGGCGTGTGGATTGGTGGTGTGGCCTGTGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 90 bp AGGCGTCCGCCGCACCCACGCAGTCCCCACAGGTGGAGTGCACGTTaGAGGCGGCGACCTTCACCCTGGCCATCTGGTGGGACGTCATCA +
Preference number: 5 (lower is better)
Translates to: RRPPHPRSPHRWSAR*RRRPSPWPSGGTSS
Trigger: TGATGACGTCCCACCAGATGGCCAGGGTGAAGGTCGCCGCCTGCAACGTGCACTCCACCTGTGGGGACTGCGTGGGTGCGGCGGACGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000505237.2
ENST00000505665.5
CDS GCA 90 bp GCACACACACAGGCACCGGAGCCGGCAGGGCCCCCTCAGGCATGGTaGAGGCGATGCTGGTATCTGTGCGCATCAGCTCCGTGCAGGGGT +
Preference number: 5 (lower is better)
Translates to: AHTQAPEPAGPPQAW*RRCWYLCASAPCRG
Trigger: ACCCCTGCACGGAGCTGATGCGCACAGATACCAGCATCGCCTGCACCATGCCTGAGGGGGCCCTGCCGGCTCCGGTGCCTGTGTGTGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000515191.1
CDS CCA 90 bp AGCGCACACACACAGGCACCGGAGCCGGCAGGGCCCCCTCAGGCATaGTGCAGGCGATGCTGGTATCTGTGCGCATCAGCTCCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: SAHTQAPEPAGPPQA*CRRCWYLCASAPCR
Trigger: CCTGCACGGAGCTGATGCGCACAGATACCAGCATCGCCTGCACCATGCCTGAGGGGGCCCTGCCGGCTCCGGTGCCTGTGTGTGTGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000515191.1
CDS-3UTR CAA 90 bp GAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGGACGCGTTCGGGTGGTaGGCCGCCACGTTCAGCATG +
Preference number: 5 (lower is better)
Translates to: EGPAWPIGHRGSFLAGTEDAFGW*AATFSM
Trigger: CATGCTGAACGTGGCGGCCAACCACCCGAACGCGTC...CTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp GGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCTCCTCCAGGCTGCGGTaGCGCGGGAAGAAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: GSEPVPTLAELAARGPHGSSRLR*RGKKEL
Trigger: CAGCTCCTTCTTCCCGCGCAACCGCAGCCTGGAGGA...GCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp CAGCCCCCATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGCGCCGCAGCATGAGCTaGGGGTTCTTGGCGGCCGAG +
Preference number: 5 (lower is better)
Translates to: QPPWALSQSQHWLSWLRGRRSMS*GFLAAE
Trigger: CTCGGCCGCCAAGAACCCCAAGCTCATGCTGCGGCG...CCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCATGGGGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS GCA 90 bp CGATCTCGGGCGTGTTCTCGAAGCGGTGGTCCTCCAGGCTGCGGTTaGGCGGGAAGAAGGAGCTGCCGTAACCGGTGTACGTGGCGCCCA +
Preference number: 5 (lower is better)
Translates to: RSRACSRSGGPPGCG*AGRRSCRNRCTWRP
Trigger: TGGGCGCCACGTACACCGGTTACGGCAGCTCCTTCTTCCCGCGCAACCGCAGCCTGGAGGACCACCGCTTCGAGAACACGCCCGAGATCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 90 bp CTGTCAGGCAGTGGCTCACAGGCCACACCACCAATCCACACGCCGTaGGCCACGTCACTGAGCCGCCGGCCCAGGTTCCTTCCTCGGATG +
Preference number: 5 (lower is better)
Translates to: LSGSGSQATPPIHTP*ATSLSRRPRFLPRM
Trigger: CATCCGAGGAAGGAACCTGGGCCGGCGGCTCAGTGACGTGGCCCACGGCGTGTGGATTGGTGGTGTGGCCTGTGAGCCACTGCCTGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp CGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAAGCTGGATGTTGAGCTaGCGCTCACAGGCCGGTCCC +
Preference number: 5 (lower is better)
Translates to: RGARMAHRPQRVVSGRNGSWMLS*RSQAGP
Trigger: GGGACCGGCCTGTGAGCGCAAGCTCAACATCCAGCT...TCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp CGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGGCTGGAGCTGGATGTaGAGCTTGCGCTCACAGGCC +
Preference number: 5 (lower is better)
Translates to: RGARMAHRPQRVVSGRNGGWSWM*SLRSQA
Trigger: GGCCTGTGAGCGCAAGCTCAACATCCAGCTCCAGCC...TCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp ACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTTTCTGCAACGTGCCCTaGGTGGAGAGCAGGCGGGTC +
Preference number: 5 (lower is better)
Translates to: TLAELAARGPHGPSATEGFCNVP*VESRRV
Trigger: GACCCGCCTGCTCTCCACCAAGGGCACGTTGCAGAA...ACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp ACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTGGATGCACGGGGCTCTaGGCAGCAGGACCAACTGGA +
Preference number: 5 (lower is better)
Translates to: TLAELAARGPHGPSATEGGCTGL*AAGPTG
Trigger: TCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCC...ACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS TCA 90 bp CAGGGCTGTCCAGGAATCGGGCTGGCCGCCCCTTTAGTTGGAGGCTaGGCGGGAACACCTGGCTCTTCCGGGTCGTGTGCAGCACCACCT +
Preference number: 5 (lower is better)
Translates to: QGCPGIGLAAPLVGG*AGTPGSSGSCAAPP
Trigger: AGGTGGTGCTGCACACGACCCGGAAGAGCCAGGTGTTCCCGCTCAGCCTCCAACTAAAGGGGCGGCCAGCCCGATTCCTGGACAGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505505.1
CDS TCA 90 bp CTCGTCTGCGTAGGCCCGCCCATTGATGAAGAAGTCCACTGGCGCTaGTGCGTTGCTCAGGGCCCCGGGGGACGGGCAGGTGATGAGGGT +
Preference number: 5 (lower is better)
Translates to: LVCVGPPIDEEVHWR*CVAQGPGGRAGDEG
Trigger: ACCCTCATCACCTGCCCGTCCCCCGGGGCCCTGAGCAACGCATCAGCGCCAGTGGACTTCTTCATCAATGGGCGGGCCTACGCAGACGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000511018.1
CDS GCA 90 bp GGATGGCGATCTCGGGCGTGTTCTCGAAGCGGTGGTCCTCCAGGCTaGGGTTGCGCGGGAAGAAGGAGCTGCCGTAACCGGTGTACGTGG +
Preference number: 5 (lower is better)
Translates to: GWRSRACSRSGGPPG*GCAGRRSCRNRCTW
Trigger: CCACGTACACCGGTTACGGCAGCTCCTTCTTCCCGCGCAACCGCAGCCTGGAGGACCACCGCTTCGAGAACACGCCCGAGATCGCCATCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 90 bp GCAGGACAGCGGCTGGGGCCCTCGCTGGCACTGGTCCAGAAATGCTaGTGGCTGGAATTGGTGCAGTCCTGCTGCAAGGTGCACCGCGTC +
Preference number: 5 (lower is better)
Translates to: AGQRLGPSLALVQKC*WLELVQSCCKVHRV
Trigger: GACGCGGTGCACCTTGCAGCAGGACTGCACCAATTCCAGCCAGCAGCATTTCTGGACCAGTGCCAGCGAGGGCCCCAGCCGCTGTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505665.5
CDS GCA 90 bp GTGTCAGCGTGTCGGTGTCCATGGCCCGCACGCTCAGCGAGTCCATaGCACAGCCCTGGAAGGACACGTTCAGGTTCCGGGGCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: VSACRCPWPARSASP*HSPGRTRSGSGAWP
Trigger: AGGCCAAGCCCCGGAACCTGAACGTGTCCTTCCAGGGCTGTGGCATGGACTCGCTGAGCGTGCGGGCCATGGACACCGACACGCTGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504979.1
ENST00000512744.5
CDS CCA 90 bp AGCGGCTGGGGCCCTCGCTGGCACTGGTCCAGAAATGCTGCTGGCTaGAATTGGTGCAGTCCTGCTGCAAGGTGCACCGCGTCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: SGWGPRWHWSRNAAG*NWCSPAARCTASPG
Trigger: CCCTGGAGACGCGGTGCACCTTGCAGCAGGACTGCACCAATTCCAGCCAGCAGCATTTCTGGACCAGTGCCAGCGAGGGCCCCAGCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505665.5
CDS CCA 90 bp GGACAGCGGCTGGGGCCCTCGCTGGCACTGGTCCAGAAATGCTGCTaGCTGGAATTGGTGCAGTCCTGCTGCAAGGTGCACCGCGTCTCC +
Preference number: 5 (lower is better)
Translates to: GQRLGPSLALVQKCC*LELVQSCCKVHRVS
Trigger: GGAGACGCGGTGCACCTTGCAGCAGGACTGCACCAATTCCAGCCAGCAGCATTTCTGGACCAGTGCCAGCGAGGGCCCCAGCCGCTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505665.5
CDS CCA 90 bp ATGGGCTCAGGGCTGTCCAGGAATCGGGCTGGCCGCCCCTTTAGTTaGAGGCTGAGCGGGAACACCTGGCTCTTCCGGGTCGTGTGCAGC +
Preference number: 5 (lower is better)
Translates to: MGSGLSRNRAGRPFS*RLSGNTWLFRVVCS
Trigger: GCTGCACACGACCCGGAAGAGCCAGGTGTTCCCGCTCAGCCTCCAACTAAAGGGGCGGCCAGCCCGATTCCTGGACAGCCCTGAGCCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505505.1
CDS CCA 90 bp GCACATCGATCTCGGAAGGCAGGACGGTCATGGCAGGACAGCGGCTaGGGCCCTCGCTGGCACTGGTCCAGAAATGCTGCTGGCGCGTCT +
Preference number: 5 (lower is better)
Translates to: AHRSRKAGRSWQDSG*GPRWHWSRNAAGAS
Trigger: AGACGCGCCAGCAGCATTTCTGGACCAGTGCCAGCGAGGGCCCCAGCCGCTGTCCTGCCATGACCGTCCTGCCTTCCGAGATCGATGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505237.2
CDS-3UTR CAA 90 bp GGGGTAGAAGATCAAGTTGAGGCCCAGTGGGCGTCCATTTCTCCCAGCAGCAGCGACTCGGTGAGCTTCTaGGCGTCGCCGCCGGCGCCG +
Preference number: 5 (lower is better)
Translates to: GVEDQVEAQWASISPSSSDSVSF*ASPPAP
Trigger: CGGCGCCGGCGGCGACGCCAAGAAGCTCACCGAGTC...GCTGCTGCTGGGAGAAATGGACGCCCACTGGGCCTCAACTTGATCTTCTACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp AGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCTTGAGAAGCCTCCCGTaGACCGTGCCCAGGAAGACC +
Preference number: 5 (lower is better)
Translates to: SWLRGARMAHRPQRVVSGLRSLP*TVPRKT
Trigger: GGTCTTCCTGGGCACGGTCAACGGGAGGCTTCTCAA...GCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp CGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACCAGGTGGAGTGCACGTaGCAGGCGGCGACCTTCACC +
Preference number: 5 (lower is better)
Translates to: RGSWQQDQLDVVEQVGGHQVECT*QAATFT
Trigger: GGTGAAGGTCGCCGCCTGCAACGTGCACTCCACCTG...GTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp GGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTGTGGAGTTGAGAACCTaGCAGAGCGTGGGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: GSFLAGTEWVVVSGARGAVELRT*QSVGSR
Trigger: CCGGGAGCCCACGCTCTGCAAGGTTCTCAACTCCAC...AGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp AGTTTGTGCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGCGCCGCAGCATGAGCTaGGGGTTCTTGGCGGCCGAG +
Preference number: 5 (lower is better)
Translates to: SLCLAAWMHGALGSRTNWRRSMS*GFLAAE
Trigger: CTCGGCCGCCAAGAACCCCAAGCTCATGCTGCGGCG...CCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGCACAAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp CAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCTCCGGGCCGTGGGGTaGGCCTCCAGCGCGGCCATG +
Preference number: 5 (lower is better)
Translates to: QVCPLSGTVISSVAWGASLRAVG*ASSAAM
Trigger: CATGGCCGCGCTGGAGGCCAACCCCACGGCCCGGAG...AGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp ATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATTCCCCCAGTTTGTGCTaGGCCGCCTGGATGCACGGG +
Preference number: 5 (lower is better)
Translates to: MGSEPVPTLAELAARGPHSPSLC*AAWMHG
Trigger: CCCGTGCATCCAGGCGGCCAAGCACAAACTGGGGGA...ATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp CCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGCTCCTCTCCCCCAGTTaGTGCTTGGCCGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: PAWPIGHRGSFLAGTEWVLLSPS*CLAAWM
Trigger: CATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAG...CACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS GCA 90 bp GGCGGGTCGGACGGGTGCAGGAAGGCGCTCACGAAGCCCAGCTTGTaGTGCTCCTTGGCGCCCTGCTTGATCTTGAGGATGTTGTCGTCG +
Preference number: 5 (lower is better)
Translates to: GGSDGCRKALTKPSL*CSLAPCLILRMLSS
Trigger: CGACGACAACATCCTCAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGAGCGCCTTCCTGCACCCGTCCGACCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 90 bp ATGGCAGGACAGCGGCTGGGGCCCTCGCTGGCACTGGTCCAGAAATaGTGCTGGCTGGAATTGGTGCAGTCCTGCTGCAAGGTGCACCGC +
Preference number: 5 (lower is better)
Translates to: MAGQRLGPSLALVQK*CWLELVQSCCKVHR
Trigger: GCGGTGCACCTTGCAGCAGGACTGCACCAATTCCAGCCAGCAGCATTTCTGGACCAGTGCCAGCGAGGGCCCCAGCCGCTGTCCTGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505665.5
CDS GCA 90 bp GCCGTGATGACCGGGTTCTGCATGTACCAGAAGGTGAGGTTGCCGTaGACGCAGCCCCGACGCTCGAAGCGCACACACACAGGCACCGGA +
Preference number: 5 (lower is better)
Translates to: AVMTGFCMYQKVRLP*TQPRRSKRTHTGTG
Trigger: TCCGGTGCCTGTGTGTGTGCGCTTCGAGCGTCGGGGCTGCGTGCACGGCAACCTCACCTTCTGGTACATGCAGAACCCGGTCATCACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000511018.1
ENST00000515191.1
CDS CCA 90 bp TGGGGCCCTCGCTGGCACTGGTCCAGAAATGCTGCTGGCTGGAATTaGTGCAGTCCTGCTGCAAGGTGCACCGCGTCTCCAGGGCACACC +
Preference number: 5 (lower is better)
Translates to: WGPRWHWSRNAAGWN*CSPAARCTASPGHT
Trigger: GGTGTGCCCTGGAGACGCGGTGCACCTTGCAGCAGGACTGCACCAATTCCAGCCAGCAGCATTTCTGGACCAGTGCCAGCGAGGGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505665.5
CDS CCA 90 bp GCAGGACGGTCATGGCAGGACAGCGGCTGGGGCCCTCGCTGGCACTaGTCCAGAAATGCTGCTGGCTGGAATTGGTGCAGTCCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: AGRSWQDSGWGPRWH*SRNAAGWNWCSPAA
Trigger: TGCAGCAGGACTGCACCAATTCCAGCCAGCAGCATTTCTGGACCAGTGCCAGCGAGGGCCCCAGCCGCTGTCCTGCCATGACCGTCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505665.5
CDS CCA 90 bp CGGAAGGCAGGACGGTCATGGCAGGACAGCGGCTGGGGCCCTCGCTaGCACTGGTCCAGAAATGCTGCTGGCTGGAATTGGTGCAGTCCT +
Preference number: 5 (lower is better)
Translates to: RKAGRSWQDSGWGPR*HWSRNAAGWNWCSP
Trigger: AGGACTGCACCAATTCCAGCCAGCAGCATTTCTGGACCAGTGCCAGCGAGGGCCCCAGCCGCTGTCCTGCCATGACCGTCCTGCCTTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505665.5
CDS CCA 90 bp CTGGGTACTCCTGGCGCACATCGATCTCGGAAGGCAGGACGGTCATaGCAGGACAGCGGCTGGGGCCCTCGCTGGCACTGGTCCAGAAAT +
Preference number: 5 (lower is better)
Translates to: LGTPGAHRSRKAGRS*QDSGWGPRWHWSRN
Trigger: ATTTCTGGACCAGTGCCAGCGAGGGCCCCAGCCGCTGTCCTGCCATGACCGTCCTGCCTTCCGAGATCGATGTGCGCCAGGAGTACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp CGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGATTGTCGTCGGAGGGGTaGAGGTCGAAGGTGAAGAGC +
Preference number: 5 (lower is better)
Translates to: RGARMAHRPQRVVSGRNGLSSEG*RSKVKS
Trigger: GCTCTTCACCTTCGACCTCAACCCCTCCGACGACAA...TCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp CAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCAGCGCCCTGCTTGATCTaGAGGATGTTGTCGTCGGAG +
Preference number: 5 (lower is better)
Translates to: QSQHWLSWLRGARMAHRPAPCLI*RMLSSE
Trigger: CTCCGACGACAACATCCTCAAGATCAAGCAGGGCGC...TGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp CCTCCGGGCTGGCGGCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCAAGCTCAGCGAAGCCTTaGCGGATTTCCTCTCGGATC +
Preference number: 5 (lower is better)
Translates to: PPGWRPPLPQFVLGRLDASSAKP*RISSRI
Trigger: GATCCGAGAGGAAATCCGCAAAGGCTTCGCTGAGCT...TGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp ATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATTTCAGGTTCCGGGGCTaGGCCTCGATGTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: MGSEPVPTLAELAARGPHFRFRG*ASMFSR
Trigger: GCGGGAGAACATCGAGGCCAAGCCCCGGAACCTGAA...ATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp CGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGATTGGTTGGCGAATCCTaGCCCAGCTGCAGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: RGARMAHRPQRVVSGRNGLVGES*PSCRSE
Trigger: CTCTGACCTGCAGCTGGGCAAGGATTCGCCAACCAA...TCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp CCTCCGGGCTGGCGGCCTCCTCTCCCCCAGTTTGTGCTTGGCCGCCTGGATGCAATGGGCATTCATCTCTaGCTCGCTGAGCGGCGTCAT +
Preference number: 5 (lower is better)
Translates to: PPGWRPPLPQFVLGRLDAMGIHL*LAERRH
Trigger: ATGACGCCGCTCAGCGAGCAAGAGATGAATGCCCAT...TGCATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAGGCCGCCAGCCCGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp GGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACACCAACACTGGCTGAGTaGGCTGCGAGGGGCCCGCAT +
Preference number: 5 (lower is better)
Translates to: GALGSRTNWTLWSKWVGTPTLAE*AARGPH
Trigger: ATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGG...TGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS GCA 90 bp GGGTCGGACGGGTGCAGGAAGGCGCTCACGAAGCCCAGCTTGTGCTaGTCCTTGGCGCCCTGCTTGATCTTGAGGATGTTGTCGTCGGAG +
Preference number: 5 (lower is better)
Translates to: GSDGCRKALTKPSLC*SLAPCLILRMLSSE
Trigger: CTCCGACGACAACATCCTCAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGAGCGCCTTCCTGCACCCGTCCGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 90 bp GCACATCGATCTCGGAAGGCAGGACGGTCATGGCAGGACAGCGGCTaGGGCCCTCGCTGGCACTGGTCCAGAAATGCTGCTGGCTGGAAT +
Preference number: 5 (lower is better)
Translates to: AHRSRKAGRSWQDSG*GPRWHWSRNAAGWN
Trigger: ATTCCAGCCAGCAGCATTTCTGGACCAGTGCCAGCGAGGGCCCCAGCCGCTGTCCTGCCATGACCGTCCTGCCTTCCGAGATCGATGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505665.5
CDS CCA 90 bp AATCGGGCTGGCCGCCCCTTTAGTTGGAGGCTGAGCGGGAACACCTaGCTCTTCCGGGTCGTGTGCAGCACCACCTGGTCACAGCGTACA +
Preference number: 5 (lower is better)
Translates to: NRAGRPFSWRLSGNT*LFRVVCSTTWSQRT
Trigger: TGTACGCTGTGACCAGGTGGTGCTGCACACGACCCGGAAGAGCCAGGTGTTCCCGCTCAGCCTCCAACTAAAGGGGCGGCCAGCCCGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505505.1
CDS CCA 90 bp TTCACCAGGACCTGGAGCTCGGAGCCTACATGGAGGTCATTCCCATaGATGGTGATCCTGGTGCCCCCGGCCTTGGGGCCCATGGTAGGC +
Preference number: 5 (lower is better)
Translates to: FTRTWSSEPTWRSFP*MVILVPPALGPMVG
Trigger: GCCTACCATGGGCCCCAAGGCCGGGGGCACCAGGATCACCATCCATGGGAATGACCTCCATGTAGGCTCCGAGCTCCAGGTCCTGGTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000515191.1
CDS CCA 90 bp TTGGGTACTCCTGGCGCACATCGATCTCGGAAGGCAGGACGGTCATaGCAGGACAGCGGCTGGGGCCCTCGCTGGCACTGGTCCAGAAAT +
Preference number: 5 (lower is better)
Translates to: LGTPGAHRSRKAGRS*QDSGWGPRWHWSRN
Trigger: ATTTCTGGACCAGTGCCAGCGAGGGCCCCAGCCGCTGTCCTGCCATGACCGTCCTGCCTTCCGAGATCGATGTGCGCCAGGAGTACCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR CAA 90 bp GCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGTCGAAGGTGAAGAGCTaGGCCAGGTCGCCGCGCGTG +
Preference number: 5 (lower is better)
Translates to: ALGSRTNWTLWSKWVGTVSKVKS*ARSPRV
Trigger: CACGCGCGGCGACCTGGCCAAGCTCTTCACCTTCGA...CACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp TGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGATGCTCTCGTTCAGGTaGATCTTGAGAAGCCTCCCG +
Preference number: 5 (lower is better)
Translates to: WLRGARMAHRPQRVVSGRMLSFR*ILRSLP
Trigger: CGGGAGGCTTCTCAAGATCAACCTGAACGAGAGCAT...CCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp GGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAAAGCGGTCCCGGGACTaGCCCTCCTTAGAGGCGTTC +
Preference number: 5 (lower is better)
Translates to: GALGSRTNWTLWSKWVGTKRSRD*PSLEAF
Trigger: GAACGCCTCTAAGGAGGGCAAGTCCCGGGACCGCTT...TGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp CGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGATGAGGGTGGAGTaGAGAACCTTGCAGAGCGTG +
Preference number: 5 (lower is better)
Translates to: RGARMAHRPQRVVSGRNGVMRVE*RTLQSV
Trigger: CACGCTCTGCAAGGTTCTCAACTCCACCCTCATCAC...TCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp CCATGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCAGGCTGTCCTGCTCCTaGTGGATAACGAGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: PWALSQSQHWLSWLRGARRLSCS*WITRVR
Trigger: TCTCACCCTCGTTATCCACAAGGAGCAGGACAGCCT...GCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp GGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGGCCGTGCTGGGCGCCCAGGGACTCGTaGACCGAGCAGTGGATGATT +
Preference number: 5 (lower is better)
Translates to: GPTGRCGASGWAQCRPCWAPRDS*TEQWMI
Trigger: AATCATCCACTGCTCGGTCAACGAGTCCCTGGGCGC...CCAGCACGGCCTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp AGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCACAGCCAGTGGGGGCTaGTCTTCACGGATACTCAGA +
Preference number: 5 (lower is better)
Translates to: SWLRGARMAHRPQRVVSGTASGG*SSRILR
Trigger: TCTGAGTATCCGTGAAGACAAGCCCCCACTGGCTGT...GCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp GAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGACAGCCAGTGGGGGCTaGTCTTCACGGATACTCAGA +
Preference number: 5 (lower is better)
Translates to: EGPAWPIGHRGSFLAGTETASGG*SSRILR
Trigger: TCTGAGTATCCGTGAAGACAAGCCCCCACTGGCTGT...CTCCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp ACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGGAGAGGAAGGCTGTaGGTCTTCCAGATGTGTAGG +
Preference number: 5 (lower is better)
Translates to: TLAELAARGPHGPSATEGRRGRL*VFQMCR
Trigger: CCTACACATCTGGAAGACCAACAGCCTTCCTCTCCG...ACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp AGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCATGGGCATTCATCTCTaGCTCGCTGAGCGGCGTCAT +
Preference number: 5 (lower is better)
Translates to: SWLRGARMAHRPQRVVSGMGIHL*LAERRH
Trigger: ATGACGCCGCTCAGCGAGCAAGAGATGAATGCCCAT...GCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS GCA 90 bp AGGCCTCGCACCGAGACTGGTTGGAAACACAGGAGTGCTGCTGGCTaGACCAGAAACAGGGCCACTGTGCCGACAGGCAGCTGGTACAGG +
Preference number: 5 (lower is better)
Translates to: RPRTETGWKHRSAAG*TRNRATVPTGSWYR
Trigger: CCTGTACCAGCTGCCTGTCGGCACAGTGGCCCTGTTTCTGGTGCAGCCAGCAGCACTCCTGTGTTTCCAACCAGTCTCGGTGCGAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 90 bp GGGTTTGGTGAGGCCTCGCACCGAGACTGGTTGGAAACACAGGAGTaGTGCTGGCTGCACCAGAAACAGGGCCACTGTGCCGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: GFGEASHRDWLETQE*CWLHQKQGHCADRQ
Trigger: CTGCCTGTCGGCACAGTGGCCCTGTTTCTGGTGCAGCCAGCAGCACTCCTGTGTTTCCAACCAGTCTCGGTGCGAGGCCTCACCAAACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 90 bp GGTGAGGCCTCGCACCGAGACTGGTTGGAAACACAGGAGTGCTGCTaGCTGCACCAGAAACAGGGCCACTGTGCCGACAGGCAGCTGGTA +
Preference number: 5 (lower is better)
Translates to: GEASHRDWLETQECC*LHQKQGHCADRQLV
Trigger: TACCAGCTGCCTGTCGGCACAGTGGCCCTGTTTCTGGTGCAGCCAGCAGCACTCCTGTGTTTCCAACCAGTCTCGGTGCGAGGCCTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 90 bp CAGGGGTCTGTGTCGTTCACCAGGACCTGGAGCTCGGAGCCTACATaGAGGTCATTCCCATGGATGGTGATCCTGGTGCCCCCGGCCTTG +
Preference number: 5 (lower is better)
Translates to: QGSVSFTRTWSSEPT*RSFPWMVILVPPAL
Trigger: CAAGGCCGGGGGCACCAGGATCACCATCCATGGGAATGACCTCCATGTAGGCTCCGAGCTCCAGGTCCTGGTGAACGACACAGACCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000515191.1
CDS-3UTR CAA 90 bp GGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCACGATGTTCCGCCCATaGACCCTCACAGACATCTCA +
Preference number: 5 (lower is better)
Translates to: GSEPVPTLAELAARGPHGTMFRP*TLTDIS
Trigger: TGAGATGTCTGTGAGGGTCAATGGGCGGAACATCGT...GCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp CGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACATTCCCTCTTCCATGTaGGGCCGGCAGCTCTCAGGA +
Preference number: 5 (lower is better)
Translates to: RGSWQQDQLDVVEQVGGHIPSSM*GRQLSG
Trigger: TCCTGAGAGCTGCCGGCCCAACATGGAAGAGGGAAT...GTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp GGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTCTGCCAGGTCTGCGTCGATGGAGCCCTaGTTGATTTGCTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: GRNGVGGSLRRQGRSARSASMEP*LICCLM
Trigger: CATCAAGCAGCAAATCAACAAGGGCTCCATCGACGC...AGACCTGGCAGAGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp GGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTTCCAGGATCTTCTCCTaGACCTGTGTCAGCGTGTCG +
Preference number: 5 (lower is better)
Translates to: GSFLAGTEWVVVSGARGASRIFS*TCVSVS
Trigger: CGACACGCTGACACAGGTCAAGGAGAAGATCCTGGA...AGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp GGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACTCGGCCCAGTGTGTaGTCCTTCTTGTCTATGAGA +
Preference number: 5 (lower is better)
Translates to: GCEGPAWPIGHRGSFLAGTRPSV*SFLSMR
Trigger: TCTCATAGACAAGAAGGACAACACACTGGGCCGAGT...TCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp CACAGAGCACCCCATGGCGCGGGCACTGCCCACTCTACCAACAGCCGCCCAAGCACCACCTGCTCAAACTaGTGCTGCAGTTGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: HRAPHGAGTAHSTNSRPSTTCSN*CCSCVL
Trigger: GAGGACACAACTGCAGCACAAGTTTGAGCAGGTGGT...GCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGCGCCATGGGGTGCTCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp AGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCACCACCTGCTCAAACTaGTGCTGCAGTTGTGTCCTC +
Preference number: 5 (lower is better)
Translates to: SWLRGARMAHRPQRVVSGTTCSN*CCSCVL
Trigger: GAGGACACAACTGCAGCACAAGTTTGAGCAGGTGGT...GCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp CCAGCTCTCTGGCCTCCATCCCAGAGACTGATCTGGGGACAGGTGGGAGGGGATAGGACCAACTGGACGTaGTGGAGCAAGTGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: PALWPPSQRLIWGQVGGDRTNWT*WSKWVG
Trigger: GCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCT...ATCCCCTCCCACCTGTCCCCAGATCAGTCTCTGGGATGGAGGCCAGAGAGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS GCA 90 bp TTTGGTGAGGCCTCGCACCGAGACTGGTTGGAAACACAGGAGTGCTaGTGGCTGCACCAGAAACAGGGCCACTGTGCCGACAGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: FGEASHRDWLETQEC*WLHQKQGHCADRQL
Trigger: CAGCTGCCTGTCGGCACAGTGGCCCTGTTTCTGGTGCAGCCAGCAGCACTCCTGTGTTTCCAACCAGTCTCGGTGCGAGGCCTCACCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 90 bp ACCCATTGGTGCTGGAGCCAGGGCACACCTCCCCCAACCTCTGGGTaGCTAACCTGTTCCCATGGCCAAGCCTTTGTTCAAGCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: THWCWSQGTPPPTSG*LTCSHGQAFVQAVP
Trigger: GGGCACAGCTTGAACAAAGGCTTGGCCATGGGAACAGGTTAGGCACCCAGAGGTTGGGGGAGGTGTGCCCTGGCTCCAGCACCAATGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514990.1
CDS CCA 90 bp CGGCAGGAGGTTGCAGTAGGCAATCTGGTGACCAAAGGCAGGGCCTaGGACCCGAGCCACAGTGCGGATGTTGTTCCCATAGTCACAGGC +
Preference number: 5 (lower is better)
Translates to: RQEVAVGNLVTKGRA*DPSHSADVVPIVTG
Trigger: GCCTGTGACTATGGGAACAACATCCGCACTGTGGCTCGGGTCCCAGGCCCTGCCTTTGGTCACCAGATTGCCTACTGCAACCTCCTGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 90 bp TGTGACACACACGATCTCCTCCGACACCGTGTATCTGTCAGGCAGTaGCTCACAGGCCACACCACCAATCCACACGCCGTGGGCCACGTC +
Preference number: 5 (lower is better)
Translates to: CDTHDLLRHRVSVRQ*LTGHTTNPHAVGHV
Trigger: GACGTGGCCCACGGCGTGTGGATTGGTGGTGTGGCCTGTGAGCCACTGCCTGACAGATACACGGTGTCGGAGGAGATCGTGTGTGTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 90 bp GGCAGCTGCCCCACGGCCGCGCCCAGGGACTCGTTGACCGAGCAGTaGATGATTCTGTCAGAGACAATCTGGATGTCGCAGCTTACTTGG +
Preference number: 5 (lower is better)
Translates to: GSCPTAAPRDSLTEQ*MILSETIWMSQLTW
Trigger: CCAAGTAAGCTGCGACATCCAGATTGTCTCTGACAGAATCATCCACTGCTCGGTCAACGAGTCCCTGGGCGCGGCCGTGGGGCAGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000514990.1
CDS CCA 90 bp ACGGCCCCCACAGAACAGTTCAGCGATGAGGCCCCTCAAGTCCCATaGACGAAGACGGCTTCCCGGACCCTGAAGTCCAATCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: TAPTEQFSDEAPQVP*TKTASRTLKSNLLS
Trigger: GGAGAGGAGATTGGACTTCAGGGTCCGGGAAGCCGTCTTCGTCCATGGGACTTGAGGGGCCTCATCGCTGAACTGTTCTGTGGGGGCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501038.6
CDS CCA 90 bp CGTGGGCCTAGCATATCCCCTGGCCACCTAACATCTTCTACCCATTaGTGCTGGAGCCAGGGCACACCTCCCCCAACCTCTGGGTGCCTA +
Preference number: 5 (lower is better)
Translates to: RGPSISPGHLTSSTH*CWSQGTPPPTSGCL
Trigger: TAGGCACCCAGAGGTTGGGGGAGGTGTGCCCTGGCTCCAGCACCAATGGGTAGAAGATGTTAGGTGGCCAGGGGATATGCTAGGCCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514990.1
CDS-3UTR CAA 90 bp GGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACATCGCACCGAGACTGGTaGGAAACACAGGAGTGCTGC +
Preference number: 5 (lower is better)
Translates to: GALGSRTNWTLWSKWVGTSHRDW*ETQECC
Trigger: GCAGCACTCCTGTGTTTCCAACCAGTCTCGGTGCGA...TGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp CTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATGTGGCGATGGTCTGGTaGAAGTTCCCTACCTGGATT +
Preference number: 5 (lower is better)
Translates to: LSQSQHWLSWLRGARMAHVAMVW*KFPTWI
Trigger: AATCCAGGTAGGGAACTTCAACCAGACCATCGCCAC...ATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp GCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGATGAGCTTGGGGTTCTaGGCGGCCGAGGCGTCAATG +
Preference number: 5 (lower is better)
Translates to: ALGSRTNWTLWSKWVGTVMSLGF*AAEASM
Trigger: CATTGACGCCTCGGCCGCCAAGAACCCCAAGCTCAT...CACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp CACAGAGCACCCCATGGCGCGGGCACTGCCCACTCTACCAACAGCCGCCCAAGCTTGTTGATTTGCTGCTaGATGGCACACAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: HRAPHGAGTAHSTNSRPSLLICC*MAHSSR
Trigger: CCTGCTGCTGTGTGCCATCAAGCAGCAAATCAACAA...GCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCCGCGCCATGGGGTGCTCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp GCTTGGCCGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTAGCGTGTTAAGCTTCTaGCGGCCGTCTTCCACCACT +
Preference number: 5 (lower is better)
Translates to: AWPPGCTGLLAAGPTGRCSVLSF*RPSSTT
Trigger: AGTGGTGGAAGACGGCCGCAAGAAGCTTAACACGCT...ACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCGGCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp CCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGCAGTCATTTCCAGTGTaGCATGGGGAGCCTCTCGGG +
Preference number: 5 (lower is better)
Translates to: PQRVVSGRNGVGGSLRRQQSFPV*HGEPLG
Trigger: CCCGAGAGGCTCCCCATGCAACACTGGAAATGACTG...CTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR CAA 90 bp CGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAACAGTCATTTCCAGTGTaGCATGGGGAGCCTCTCGGG +
Preference number: 5 (lower is better)
Translates to: RLDARGSWQQDQLDVVEQQSFPV*HGEPLG
Trigger: CCCGAGAGGCTCCCCATGCAACACTGGAAATGACTG...TTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS TCA 90 bp CAGTGCGGATGTTGTTCCCATAGTCACAGGCCATCTCCATGCCACTaGGGCTGGGCAGGCTGCCCGAGATCTGCAGGATCATGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: QCGCCSHSHRPSPCH*GWAGCPRSAGSCLG
Trigger: ACCCAGGCATGATCCTGCAGATCTCGGGCAGCCTGCCCAGCCTCAGTGGCATGGAGATGGCCTGTGACTATGGGAACAACATCCGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS TCA 90 bp TCCATGTTGGGCCGGCAGCTCTCAGGAATCTGTGGAAGCAACTGGTaGTGGGGTGTCCAGAGGGGCCCAGTGTCCCTGCCTAGCCTAACA +
Preference number: 5 (lower is better)
Translates to: SMLGRQLSGICGSNW*WGVQRGPVSLPSLT
Trigger: TGTTAGGCTAGGCAGGGACACTGGGCCCCTCTGGACACCCCATCACCAGTTGCTTCCACAGATTCCTGAGAGCTGCCGGCCCAACATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503166.1
CDS GCA 90 bp AGGAAGGCGCTCACGAAGCCCAGCTTGTGCTGCTCCTTGGCGCCCTaGTTGATCTTGAGGATGTTGTCGTCGGAGGGGTTGAGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: RKALTKPSLCCSLAP*LILRMLSSEGLRSK
Trigger: CTTCGACCTCAACCCCTCCGACGACAACATCCTCAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGAGCGCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 90 bp AGCGAGGCCAGGCTGCACCTGTCGCGCACCGCAAAGTCCTTCTGCTaGTCCAGCGCGTGGACAAAGACGATGAGGAAGTGCTTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: SEARLHLSRTAKSFC*SSAWTKTMRKCLLL
Trigger: CAACAACAAGCACTTCCTCATCGTCTTTGTCCACGCGCTGGAGCAGCAGAAGGACTTTGCGGTGCGCGACAGGTGCAGCCTGGCCTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000503166.1
ENST00000512744.5
CDS GCA 90 bp GGCCCAGTGTCCCTGCCTAGCCTAACAGCCAGTGCTTACGACGGCTaGTTGTATGCCTCCTGGGATGGGGAGCTCATTACCTTCCACGGT +
Preference number: 5 (lower is better)
Translates to: GPVSLPSLTASAYDG*LYASWDGELITFHG
Trigger: ACCGTGGAAGGTAATGAGCTCCCCATCCCAGGAGGCATACAAGCAGCCGTCGTAAGCACTGGCTGTTAGGCTAGGCAGGGACACTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503166.1
CDS CCA 90 bp GTGCGCATCAGCTCCGTGCAGGGGTCTGTGTCGTTCACCAGGACCTaGAGCTCGGAGCCTACATGGAGGTCATTCCCATGGATGGTGATC +
Preference number: 5 (lower is better)
Translates to: VRISSVQGSVSFTRT*SSEPTWRSFPWMVI
Trigger: GATCACCATCCATGGGAATGACCTCCATGTAGGCTCCGAGCTCCAGGTCCTGGTGAACGACACAGACCCCTGCACGGAGCTGATGCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000515191.1
CDS CCA 90 bp TCCCGGCCAATGTGGTGGACGGCCATGGACACATTCTGCACCATGTaGAAACGCTCACCAGCCACTGTGATGGTCCTGCCGCCACTGACA +
Preference number: 5 (lower is better)
Translates to: SRPMWWTAMDTFCTM*KRSPATVMVLPPLT
Trigger: TGTCAGTGGCGGCAGGACCATCACAGTGGCTGGTGAGCGTTTCCACATGGTGCAGAATGTGTCCATGGCCGTCCACCACATTGGCCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000511018.1
CDS CCA 90 bp CTGTCCTGCTCCTTGTGGATAACGAGGGTGAGAGGCTCCCCGGGGTaGTGCTTGATCCACTTCTCCCTCTTGGCCGTAGAGAACTGTGGG +
Preference number: 5 (lower is better)
Translates to: LSCSLWITRVRGSPG*CLIHFSLLAVENCG
Trigger: CCCACAGTTCTCTACGGCCAAGAGGGAGAAGTGGATCAAGCACCACCCCGGGGAGCCTCTCACCCTCGTTATCCACAAGGAGCAGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000511018.1
ENST00000514990.1
CDS CCA 90 bp TCTGCAGCAGCGTCTTCTGCCAGTAACGCTCAGCACGTCGGCTCTTaGTACAGAAGACGAACAGGGCCACCACGGAGAGCAGCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: SAAASSASNAQHVGS*YRRRTGPPRRAAAG
Trigger: TCCTGCTGCTGCTCTCCGTGGTGGCCCTGTTCGTCTTCTGTACCAAGAGCCGACGTGCTGAGCGTTACTGGCAGAAGACGCTGCTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp GCAGAAACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCACCAGTGTGGATGCCGTCCAGGGCGAAGTaGTTGGTGGGCGTGGGCGAG +
Preference number: 5 (lower is better)
Translates to: AETNQRSVQGGLPAPVWMPSRAK*LVGVGE
Trigger: CTCGCCCACGCCCACCAACAACTTCGCCCTGGACGG...CATCCACACTGGTGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp CCACAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGTCCTTGGCGCCCTGCTaGATCTTGAGGATGTTGTCG +
Preference number: 5 (lower is better)
Translates to: PQRVVSGRNGVGGSLRRQSLAPC*ILRMLS
Trigger: CGACAACATCCTCAAGATCAAGCAGGGCGCCAAGGA...CTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp TGGGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGATGGTGAAATTGGCCTaGACGATGTTCCGCCCATTG +
Preference number: 5 (lower is better)
Translates to: WALSQSQHWLSWLRGARMMVKLA*TMFRPL
Trigger: CAATGGGCGGAACATCGTCAAGGCCAATTTCACCAT...CATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp TGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTGTGTGGGGGTACACTaGTGCAGTGCGGCTGCAGTC +
Preference number: 5 (lower is better)
Translates to: CQVCPLSGTVISSVAWGACVGVH*CSAAAV
Trigger: GACTGCAGCCGCACTGCACAAGTGTACCCCCACACA...GGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp GGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACATGGAAAAAGGCAGTGTaGGCCAGAGGCACCAGGATG +
Preference number: 5 (lower is better)
Translates to: GALGSRTNWTLWSKWVGTWKKAV*ARGTRM
Trigger: CATCCTGGTGCCTCTGGCCAACACTGCCTTTTTCCA...TGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp AGTCTGAGTCACAGGCACGGGGTAGAAGATCAAGTTGAGGCCCAGTGGGCGTCCTCCCCGGGGTGGTGCTaGATCCACTTCTCCCTCTTG +
Preference number: 5 (lower is better)
Translates to: SLSHRHGVEDQVEAQWASSPGWC*IHFSLL
Trigger: CAAGAGGGAGAAGTGGATCAAGCACCACCCCGGGGA...GGACGCCCACTGGGCCTCAACTTGATCTTCTACCCCGTGCCTGTGACTCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp CGCCTGGATGCACGGGGCTCTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAATCAGCACGTCGGCTCTaGGTACAGAAGACGAACAGG +
Preference number: 5 (lower is better)
Translates to: RLDARGSWQQDQLDVVEQSARRL*VQKTNR
Trigger: CCTGTTCGTCTTCTGTACCAAGAGCCGACGTGCTGA...TTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCCAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp GCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTCGTTTCTGGCAGGAACGGAGGAAGTGCTTGTTGTaGAGTAGTGAGGAGAACAAG +
Preference number: 5 (lower is better)
Translates to: ARGPHGPSATEGRFWQERRKCLL*SSEENK
Trigger: CTTGTTCTCCTCACTACTCAACAACAAGCACTTCCT...CCGTTCCTGCCAGAAACGACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp GCTCTGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGATGAGCTTGGGGTTCTaGGCGGCCGAGGCGTCAATG +
Preference number: 5 (lower is better)
Translates to: ALPGLPALWNSHFQCCMGMSLGF*AAEASM
Trigger: CATTGACGCCTCGGCCGCCAAGAACCCCAAGCTCAT...CCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp GGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCAGTGTGTTGTCCTTCTaGTCTATGAGACTCATGGCC +
Preference number: 5 (lower is better)
Translates to: GSEPVPTLAELAARGPHGSVLSF*SMRLMA
Trigger: GGCCATGAGTCTCATAGACAAGAAGGACAACACACT...GCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp CCAGCTCTCTGGCCTCCATCCCAGAGACTGATCTGGGGACAGGTGGGAGGGGATATGGGCATTCATCTCTaGCTCGCTGAGCGGCGTCAT +
Preference number: 5 (lower is better)
Translates to: PALWPPSQRLIWGQVGGDMGIHL*LAERRH
Trigger: ATGACGCCGCTCAGCGAGCAAGAGATGAATGCCCAT...ATCCCCTCCCACCTGTCCCCAGATCAGTCTCTGGGATGGAGGCCAGAGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp AGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTCTGCCATGGCCACATaGGTGTTGAACTCATTCTGG +
Preference number: 5 (lower is better)
Translates to: RVVSGRNGVGGSLRRQGRSAMAT*VLNSFW
Trigger: CCAGAATGAGTTCAACACCAATGTGGCCATGGCAGA...GCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR CAA 90 bp AGTCTGAGTCACAGGCACGGGGTAGAAGATCAAGTTGAGGCCCAGTGGGCGTCCAAACTTGTGCTGCAGTaGTGTCCTCCGGGCCGTGGG +
Preference number: 5 (lower is better)
Translates to: SLSHRHGVEDQVEAQWASKLVLQ*CPPGRG
Trigger: CCCACGGCCCGGAGGACACAACTGCAGCACAAGTTT...GGACGCCCACTGGGCCTCAACTTGATCTTCTACCCCGTGCCTGTGACTCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp GGGGTAGAAGATCAAGTTGAGGCCCAGTGGGCGTCCATTTCTCCCAGCAGCAGCAAACTTGTGCTGCAGTaGTGTCCTCCGGGCCGTGGG +
Preference number: 5 (lower is better)
Translates to: GVEDQVEAQWASISPSSSKLVLQ*CPPGRG
Trigger: CCCACGGCCCGGAGGACACAACTGCAGCACAAGTTT...GCTGCTGCTGGGAGAAATGGACGCCCACTGGGCCTCAACTTGATCTTCTACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS TCA 90 bp ACGTCATCAGGTAAAGGTAACCGGAGTCTGCTGGGTCAAACTGCATaGCATGGTGCACGGGCTCCCCATAGGCCACAGTCACCACCCGCC +
Preference number: 5 (lower is better)
Translates to: TSSGKGNRSLLGQTA*HGARAPHRPQSPPA
Trigger: GGCGGGTGGTGACTGTGGCCTATGGGGAGCCCGTGCACCATGTCATGCAGTTTGACCCAGCAGACTCCGGTTACCTTTACCTGATGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000505237.2
ENST00000505665.5
CDS GCA 90 bp CCTGGCCATCTGGTGGGACGTCATCAGGTAAAGGTAACCGGAGTCTaGTGGGTCAAACTGCATGACATGGTGCACGGGCTCCCCATAGGC +
Preference number: 5 (lower is better)
Translates to: PGHLVGRHQVKVTGV*WVKLHDMVHGLPIG
Trigger: GCCTATGGGGAGCCCGTGCACCATGTCATGCAGTTTGACCCAGCAGACTCCGGTTACCTTTACCTGATGACGTCCCACCAGATGGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000505237.2
ENST00000505665.5
CDS GCA 90 bp TCCTGCTCCTTGTGGATAACGAGGGTGAGAGGCTCCCCGGGGTGGTaGTTGATCCACTTCTCCCTCTTGGCCGTAGAGAACTGTGGGTTG +
Preference number: 5 (lower is better)
Translates to: SCSLWITRVRGSPGW*LIHFSLLAVENCGL
Trigger: CAACCCACAGTTCTCTACGGCCAAGAGGGAGAAGTGGATCAAGCACCACCCCGGGGAGCCTCTCACCCTCGTTATCCACAAGGAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000511018.1
ENST00000514990.1
CDS CCA 90 bp GGCCATCTGGTGGGACGTCATCAGGTAAAGGTAACCGGAGTCTGCTaGGTCAAACTGCATGACATGGTGCACGGGCTCCCCATAGGCCAC +
Preference number: 5 (lower is better)
Translates to: GHLVGRHQVKVTGVC*VKLHDMVHGLPIGH
Trigger: GTGGCCTATGGGGAGCCCGTGCACCATGTCATGCAGTTTGACCCAGCAGACTCCGGTTACCTTTACCTGATGACGTCCCACCAGATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000505237.2
ENST00000505665.5
CDS CCA 90 bp GTGGAGTTGAGAACCTTGCAGAGCGTGGGCTCCCGGCCAATGTGGTaGACGGCCATGGACACATTCTGCACCATGTGGAAACGCTCACCA +
Preference number: 5 (lower is better)
Translates to: VELRTLQSVGSRPMW*TAMDTFCTMWKRSP
Trigger: TGGTGAGCGTTTCCACATGGTGCAGAATGTGTCCATGGCCGTCCACCACATTGGCCGGGAGCCCACGCTCTGCAAGGTTCTCAACTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000511018.1
CDS CCA 90 bp AGAGGAAGGCTGTGGGGTAGGGTGACAAAGACAGTGAGGGTAGGGTaGGGTAGGAAGCAGTCGAGGGACAGTTGTGGAGGAGAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: RGRLWGRVTKTVRVG*GRKQSRDSCGGESW
Trigger: CCAGCTCTCTCCTCCACAACTGTCCCTCGACTGCTTCCTACCCCACCCTACCCTCACTGTCTTTGTCACCCTACCCCACAGCCTTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504524.5
CDS-3UTR CAA 90 bp GGGCACTGCCCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTGACACTACTCTCACGAAGCCCAGCTaGTGCTGCTCCTTGGCGCCC +
Preference number: 5 (lower is better)
Translates to: GHCPLYQQPPKQQKSDTTLTKPS*CCSLAP
Trigger: GGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGAG...AGTAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp AGTGCGGCTGCAGTCGTAGATGGTGAAATTGGCCTTGACGATGTTCCGCCCATTCAGGTGGAGTGCACGTaGCAGGCGGCGACCTTCACC +
Preference number: 5 (lower is better)
Translates to: SAAAVVDGEIGLDDVPPIQVECT*QAATFT
Trigger: GGTGAAGGTCGCCGCCTGCAACGTGCACTCCACCTG...AATGGGCGGAACATCGTCAAGGCCAATTTCACCATCTACGACTGCAGCCGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR CAA 90 bp GACAGGCAGCTGGTACAGGCTGTGTGGGGGTACACTTGTGCAGTGCGGCTGCAGACGATGTTCCGCCCATaGACCCTCACAGACATCTCA +
Preference number: 5 (lower is better)
Translates to: DRQLVQAVWGYTCAVRLQTMFRP*TLTDIS
Trigger: TGAGATGTCTGTGAGGGTCAATGGGCGGAACATCGT...CTGCAGCCGCACTGCACAAGTGTACCCCCACACAGCCTGTACCAGCTGCCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR CAA 90 bp GAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGAGGAAGTGCTTGTTGTaGAGTAGTGAGGAGAACAAG +
Preference number: 5 (lower is better)
Translates to: EPVPTLAELAARGPHGPSRKCLL*SSEENK
Trigger: CTTGTTCTCCTCACTACTCAACAACAAGCACTTCCT...CGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp GGCTCTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCTCGATGTGGTCTGTCTaGTCGATGTCAAAGACAAAC +
Preference number: 5 (lower is better)
Translates to: GSEPVPTLAELAARGPHGSMWSV*SMSKTN
Trigger: GTTTGTCTTTGACATCGACAAGACAGACCACATCGA...GCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp ACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGGTTCGATGTGGTCTGTCTaGTCGATGTCAAAGACAAAC +
Preference number: 5 (lower is better)
Translates to: TLAELAARGPHGPSATEGSMWSV*SMSKTN
Trigger: GTTTGTCTTTGACATCGACAAGACAGACCACATCGA...ACCCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp GCTCTGCCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGTTGGTTGGCGAATCCTaGCCCAGCTGCAGGTCAGAG +
Preference number: 5 (lower is better)
Translates to: ALPGLPALWNSHFQCCMGLVGES*PSCRSE
Trigger: CTCTGACCTGCAGCTGGGCAAGGATTCGCCAACCAA...CCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGGCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS TCA 90 bp GTAATGGGCCAGCGTGTTAAGCTTCTTGCGGCCGTCTTCCACCACTaGGGTGTCGTCCAGGTCCCGAAGGATGTAGCTCTGTGTGCTGGA +
Preference number: 5 (lower is better)
Translates to: VMGQRVKLLAAVFHH*GVVQVPKDVALCAG
Trigger: TCCAGCACACAGAGCTACATCCTTCGGGACCTGGACGACACCTCAGTGGTGGAAGACGGCCGCAAGAAGCTTAACACGCTGGCCCATTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS TCA 90 bp TCACTCATCCGAGAACACACAGCTGGGAAATGGCAGAGGAGGGCTTaGCCCCAAGCAGGCGAGGCCAGAAGACTAGACTCTGAACCCCCT +
Preference number: 5 (lower is better)
Translates to: SLIREHTAGKWQRRA*PQAGEARRLDSEPP
Trigger: AGGGGGTTCAGAGTCTAGTCTTCTGGCCTCGCCTGCTTGGGGTCAAGCCCTCCTCTGCCATTTCCCAGCTGTGTGTTCTCGGATGAGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512807.1
CDS TCA 90 bp GTCTTGAGCAGGTGCTGCTTCTCCGAGCCTCAGTGTGCTTATCTGTaGAGTGGAGCTGATGGTGCCCACCTGAGAGGGGTGCGGGAGAAT +
Preference number: 5 (lower is better)
Translates to: VLSRCCFSEPQCAYL*SGADGAHLRGVREN
Trigger: ATTCTCCCGCACCCCTCTCAGGTGGGCACCATCAGCTCCACTTCACAGATAAGCACACTGAGGCTCGGAGAAGCAGCACCTGCTCAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512807.1
CDS-3UTR CAA 90 bp CTTGGCAGCAGGACCAACTGGACGTTGTGGAGCAAGTGGGTGGGCACAGTGCAGTCGTTCAGGTTGATCTaGAGAAGCCTCCCGTTGACC +
Preference number: 5 (lower is better)
Translates to: LGSRTNWTLWSKWVGTVQSFRLI*RSLPLT
Trigger: GGTCAACGGGAGGCTTCTCAAGATCAACCTGAACGA...CTGCACTGTGCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCTGCTGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp GACAGGCAGCTGGTACAGGCTGTGTGGGGGTACACTTGTGCAGTGCGGCTGCAGATGGTGAAATTGGCCTaGACGATGTTCCGCCCATTG +
Preference number: 5 (lower is better)
Translates to: DRQLVQAVWGYTCAVRLQMVKLA*TMFRPL
Trigger: CAATGGGCGGAACATCGTCAAGGCCAATTTCACCAT...CTGCAGCCGCACTGCACAAGTGTACCCCCACACAGCCTGTACCAGCTGCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR CAA 90 bp AGTCTGAGTCACAGGCACGGGGTAGAAGATCAAGTTGAGGCCCAGTGGGCGTCCATCCACTTCTCCCTCTaGGCCGTAGAGAACTGTGGG +
Preference number: 5 (lower is better)
Translates to: SLSHRHGVEDQVEAQWASIHFSL*AVENCG
Trigger: CCCACAGTTCTCTACGGCCAAGAGGGAGAAGTGGAT...GGACGCCCACTGGGCCTCAACTTGATCTTCTACCCCGTGCCTGTGACTCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp GGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTATACTCAGAATGGCCTaGAACAGGTCATCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: GSFLAGTEWVVVSGARGAILRMA*NRSSRN
Trigger: GTTTCTGGATGACCTGTTCAAGGCCATTCTGAGTAT...AGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp CAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATCGGCCACAGAGGATGGCCACATTGGTGTaGAACTCATTCTGGTATTTC +
Preference number: 5 (lower is better)
Translates to: QHWLSWLRGARMAHRPQRMATLV*NSFWYF
Trigger: GAAATACCAGAATGAGTTCAACACCAATGTGGCCAT...CCTCTGTGGCCGATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR CAA 90 bp TCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGCGCTCTGCCAGGATGGCCACATTGGTGTaGAACTCATTCTGGTATTTC +
Preference number: 5 (lower is better)
Translates to: SGRNGVGGSLRRQGRSARMATLV*NSFWYF
Trigger: GAAATACCAGAATGAGTTCAACACCAATGTGGCCAT...CCTGGCAGAGCGCCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR CAA 90 bp CAGCAGCCTGACCAACTCTCCATGTGTCTCAGGCCTCACTGTAGCACTCGTAGAAGGACCAACTGGACGTaGTGGAGCAAGTGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: QQPDQLSMCLRPHCSTRRRTNWT*WSKWVG
Trigger: GCCCACCCACTTGCTCCACAACGTCCAGTTGGTCCT...TCTACGAGTGCTACAGTGAGGCCTGAGACACATGGAGAGTTGGTCAGGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512744.5
CDS-3UTR CAA 90 bp GGGCACTGCCCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTGACACTACTGGATGCACGGGGCTCTaGGCAGCAGGACCAACTGGA +
Preference number: 5 (lower is better)
Translates to: GHCPLYQQPPKQQKSDTTGCTGL*AAGPTG
Trigger: TCCAGTTGGTCCTGCTGCCAAGAGCCCCGTGCATCC...AGTAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp GCAGAAACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCACCAGTGTGGATGCTCCTCTCCCCCAGTTaGTGCTTGGCCGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: AETNQRSVQGGLPAPVWMLLSPS*CLAAWM
Trigger: CATCCAGGCGGCCAAGCACAAACTGGGGGAGAGGAG...CATCCACACTGGTGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTTTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS TCA 90 bp ATCTGGATGTCGCAGCTTACTTGGCCTATCTTGACCCGGTACTCGTaGCTCTGGAGCCCCAGGCTGTCCTGCTCCTTGTGGATAACGAGG +
Preference number: 5 (lower is better)
Translates to: IWMSQLTWPILTRYS*LWSPRLSCSLWITR
Trigger: CCTCGTTATCCACAAGGAGCAGGACAGCCTGGGGCTCCAGAGTCACGAGTACCGGGTCAAGATAGGCCAAGTAAGCTGCGACATCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000514990.1
CDS CCA 90 bp CTGCACCTGTCGCGCACCGCAAAGTCCTTCTGCTGCTCCAGCGCGTaGACAAAGACGATGAGGAAGTGCTTGTTGTTGAGTAGTGAGGAG +
Preference number: 5 (lower is better)
Translates to: LHLSRTAKSFCCSSA*TKTMRKCLLLSSEE
Trigger: CTCCTCACTACTCAACAACAAGCACTTCCTCATCGTCTTTGTCCACGCGCTGGAGCAGCAGAAGGACTTTGCGGTGCGCGACAGGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000503166.1
ENST00000512744.5
CDS-3UTR CAA 90 bp GGGGTAGAAGATCAAGTTGAGGCCCAGTGGGCGTCCATTTCTCCCAGCAGCAGCTTGATCTTGAGGATGTaGTCGTCGGAGGGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: GVEDQVEAQWASISPSSSLILRM*SSEGLR
Trigger: CCTCAACCCCTCCGACGACAACATCCTCAAGATCAA...GCTGCTGCTGGGAGAAATGGACGCCCACTGGGCCTCAACTTGATCTTCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp CAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGATGAGGAAGTGCTTGTaGTTGAGTAGTGAGGAGAAC +
Preference number: 5 (lower is better)
Translates to: QRVVSGRNGVGGSLRRQGMRKCL*LSSEEN
Trigger: GTTCTCCTCACTACTCAACAACAAGCACTTCCTCAT...CCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp TCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCGGGACCCCTCCCGCGTCGATGGAGCCCTaGTTGATTTGCTGCTTGATG +
Preference number: 5 (lower is better)
Translates to: SLEQSFPVLHGEPLGTPPASMEP*LICCLM
Trigger: CATCAAGCAGCAAATCAACAAGGGCTCCATCGACGC...GGGAGGGGTCCCGAGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp CAGAGGGTCGTTTCTGGCAGGAACGGAGTGGGTGGTAGTCTCAGGCGCCAGGGGATACTCAGAATGGCCTaGAACAGGTCATCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: QRVVSGRNGVGGSLRRQGILRMA*NRSSRN
Trigger: GTTTCTGGATGACCTGTTCAAGGCCATTCTGAGTAT...CCCCTGGCGCCTGAGACTACCACCCACTCCGTTCCTGCCAGAAACGACCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp CTGAGCCAGTCCCAACACTGGCTGAGTTGGCTGCGAGGGGCCCGCATGGCCCATATGGCCACATTGGTGTaGAACTCATTCTGGTATTTC +
Preference number: 5 (lower is better)
Translates to: LSQSQHWLSWLRGARMAHMATLV*NSFWYF
Trigger: GAAATACCAGAATGAGTTCAACACCAATGTGGCCAT...ATGGGCCATGCGGGCCCCTCGCAGCCAACTCAGCCAGTGTTGGGACTGGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS TCA 90 bp TTCTGTCAGAGACAATCTGGATGTCGCAGCTTACTTGGCCTATCTTaGCCCGGTACTCGTGACTCTGGAGCCCCAGGCTGTCCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: FCQRQSGCRSLLGLS*PGTRDSGAPGCPAP
Trigger: AGGAGCAGGACAGCCTGGGGCTCCAGAGTCACGAGTACCGGGTCAAGATAGGCCAAGTAAGCTGCGACATCCAGATTGTCTCTGACAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000514990.1
CDS-3UTR CAA 90 bp GTCGTAGATGGTGAAATTGGCCTTGACGATGTTCCGCCCATTGACCCTCACAGATGTGTGGGGGTACACTaGTGCAGTGCGGCTGCAGTC +
Preference number: 5 (lower is better)
Translates to: VVDGEIGLDDVPPIDPHRCVGVH*CSAAAV
Trigger: GACTGCAGCCGCACTGCACAAGTGTACCCCCACACA...TCTGTGAGGGTCAATGGGCGGAACATCGTCAAGGCCAATTTCACCATCTACGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS-3UTR CAA 90 bp GGGGTAGAAGATCAAGTTGAGGCCCAGTGGGCGTCCATTTCTCCCAGCAGCAGCTCTGCCATGGCCACATaGGTGTTGAACTCATTCTGG +
Preference number: 5 (lower is better)
Translates to: GVEDQVEAQWASISPSSSSAMAT*VLNSFW
Trigger: CCAGAATGAGTTCAACACCAATGTGGCCATGGCAGA...GCTGCTGCTGGGAGAAATGGACGCCCACTGGGCCTCAACTTGATCTTCTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp TGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTCGGGACTCTGCCATGGCCACATaGGTGTTGAACTCATTCTGG +
Preference number: 5 (lower is better)
Translates to: CPLSGTVISSVAWGASRDSAMAT*VLNSFW
Trigger: CCAGAATGAGTTCAACACCAATGTGGCCATGGCAGA...GTCCCGAGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504689.1
ENST00000512744.5
CDS-3UTR CAA 90 bp GGCTGTGTGGGGGTACACTTGTGCAGTGCGGCTGCAGTCGTAGATGGTGAAATTTCAACAGTCACGTGGTaGGGTACTCCTGGCGCACAT +
Preference number: 5 (lower is better)
Translates to: GCVGVHLCSAAAVVDGEISTVTW*GTPGAH
Trigger: ATGTGCGCCAGGAGTACCCAACCACGTGACTGTTGA...AATTTCACCATCTACGACTGCAGCCGCACTGCACAAGTGTACCCCCACACAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505665.5
CDS TCA 90 bp AGCCTCAGTGTGCTTATCTGTGAAGTGGAGCTGATGGTGCCCACCTaGGAGGGGTGCGGGAGAATGATAGTAAGGGCAACACCTAGACCA +
Preference number: 5 (lower is better)
Translates to: SLSVLICEVELMVPT*EGCGRMIVRATPRP
Trigger: TGGTCTAGGTGTTGCCCTTACTATCATTCTCCCGCACCCCTCTCAGGTGGGCACCATCAGCTCCACTTCACAGATAAGCACACTGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512807.1
CDS-3UTR CAA 90 bp CAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCTTTGTTGATTTGCTGCTaGATGGCACACAGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: QVCPLSGTVISSVAWGASLLICC*MAHSSR
Trigger: CCTGCTGCTGTGTGCCATCAAGCAGCAAATCAACAA...AGAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp GGGCACTGCCCACTCTACCAACAGCCGCCCAAGCAACAAAAATCTGACACTACTTCCAGGATCTTCTCCTaGACCTGTGTCAGCGTGTCG +
Preference number: 5 (lower is better)
Translates to: GHCPLYQQPPKQQKSDTTSRIFS*TCVSVS
Trigger: CGACACGCTGACACAGGTCAAGGAGAAGATCCTGGA...AGTAGTGTCAGATTTTTGTTGCTTGGGCGGCTGTTGGTAGAGTGGGCAGTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp TTGGTAGTTGAAGCAGAAACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCATTCTGCAACGTGCCCTaGGTGGAGAGCAGGCGGGTC +
Preference number: 5 (lower is better)
Translates to: LVVEAETNQRSVQGGLPAFCNVP*VESRRV
Trigger: GACCCGCCTGCTCTCCACCAAGGGCACGTTGCAGAA...TGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTTTCTGCTTCAACTACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp CCAGGTCTGCCCGCTCTCTGGAACAGTCATTTCCAGTGTTGCATGGGGAGCCTCATGAGGAAGTGCTTGTaGTTGAGTAGTGAGGAGAAC +
Preference number: 5 (lower is better)
Translates to: PGLPALWNSHFQCCMGSLMRKCL*LSSEEN
Trigger: GTTCTCCTCACTACTCAACAACAAGCACTTCCTCAT...GAGGCTCCCCATGCAACACTGGAAATGACTGTTCCAGAGAGCGGGCAGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS GCA 90 bp GCCTTTCCTGAAGGCTTTTTGCTGTTGTCCGTAGTTCACTCACACTaGAGGACTTGTCTCCTACAGAGTAAGAGCTTCTTGCTGAGGGGG +
Preference number: 5 (lower is better)
Translates to: AFPEGFLLLSVVHSH*RTCLLQSKSFLLRG
Trigger: CCCCCTCAGCAAGAAGCTCTTACTCTGTAGGAGACAAGTCCTGCAGTGTGAGTGAACTACGGACAACAGCAAAAAGCCTTCAGGAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504979.1
CDS GCA 90 bp AAGTCCTTCTGCTGCTCCAGCGCGTGGACAAAGACGATGAGGAAGTaGTTGTTGTTGAGTAGTGAGGAGAACAAGCTAATTCCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: KSFCCSSAWTKTMRK*LLLSSEENKLIPSS
Trigger: GGAAGAGGGAATTAGCTTGTTCTCCTCACTACTCAACAACAAGCACTTCCTCATCGTCTTTGTCCACGCGCTGGAGCAGCAGAAGGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000503166.1
ENST00000512744.5
CDS GCA 90 bp TTCAGTAGCTCTCTATTGACTGGAGAACATGGTTCCAAATTTCTCTaGTTGAGATTCAGGGACCTGGGCGTGGGCCTAGCATATCCCCTG +
Preference number: 5 (lower is better)
Translates to: FSSSLLTGEHGSKFL*LRFRDLGVGLAYPL
Trigger: CAGGGGATATGCTAGGCCCACGCCCAGGTCCCTGAATCTCAAGCAGAGAAATTTGGAACCATGTTCTCCAGTCAATAGAGAGCTACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514990.1
CDS-3UTR CAA 90 bp AGGTTTGTCCGTAAGGCTTTTATTATAAAGAAGATTCCAGAGTCCCAGCTGCCCCAGTCATTTCCAGTGTaGCATGGGGAGCCTCTCGGG +
Preference number: 5 (lower is better)
Translates to: RFVRKAFIIKKIPESQLPQSFPV*HGEPLG
Trigger: CCCGAGAGGCTCCCCATGCAACACTGGAAATGACTG...GGGCAGCTGGGACTCTGGAATCTTCTTTATAATAAAAGCCTTACGGACAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000504689.1
CDS TCA 90 bp ATTCCCACCATTAACATGGGTCGCATTTTACAGTGGAGGGGAAACTaGAGCACAGAGAGGCTAAGTCACTCATCCGAGAACACACAGCTG +
Preference number: 5 (lower is better)
Translates to: IPTINMGRILQWRGN*STERLSHSSENTQL
Trigger: CAGCTGTGTGTTCTCGGATGAGTGACTTAGCCTCTCTGTGCTTCAGTTTCCCCTCCACTGTAAAATGCGACCCATGTTAATGGTGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512807.1
CDS-3UTR CAA 90 bp AGGTTTGTCCGTAAGGCTTTTATTATAAAGAAGATTCCAGAGTCCCAGCTGCCCAGCGTGTTAAGCTTCTaGCGGCCGTCTTCCACCACT +
Preference number: 5 (lower is better)
Translates to: RFVRKAFIIKKIPESQLPSVLSF*RPSSTT
Trigger: AGTGGTGGAAGACGGCCGCAAGAAGCTTAACACGCT...GGGCAGCTGGGACTCTGGAATCTTCTTTATAATAAAAGCCTTACGGACAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp TTGGTAGTTGAAGCAGAAACCAATCAAAGGTCAGTTCAAGGAGGGCTCCCTGCAACTCGGCCCAGTGTGTaGTCCTTCTTGTCTATGAGA +
Preference number: 5 (lower is better)
Translates to: LVVEAETNQRSVQGGLPATRPSV*SFLSMR
Trigger: TCTCATAGACAAGAAGGACAACACACTGGGCCGAGT...TGCAGGGAGCCCTCCTTGAACTGACCTTTGATTGGTTTCTGCTTCAACTACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS-3UTR CAA 90 bp AAAGTGGTGCTATCTTTAGAAACACTTTCAGCAAGATCAAGTAGCCCAGCTACAAGCTTGTGCTGCTCCTaGGCGCCCTGCTTGATCTTG +
Preference number: 5 (lower is better)
Translates to: KVVLSLETLSARSSSPATSLCCS*APCLIL
Trigger: CAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCT...TGTAGCTGGGCTACTTGATCTTGCTGAAAGTGTTTCTAAAGATAGCACCACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp AGGTTTGTCCGTAAGGCTTTTATTATAAAGAAGATTCCAGAGTCCCAGCTGCCCGATGTCGCAGCTTACTaGGCCTATCTTGACCCGGTA +
Preference number: 5 (lower is better)
Translates to: RFVRKAFIIKKIPESQLPDVAAY*AYLDPV
Trigger: TACCGGGTCAAGATAGGCCAAGTAAGCTGCGACATC...GGGCAGCTGGGACTCTGGAATCTTCTTTATAATAAAAGCCTTACGGACAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS-3UTR CAA 90 bp AGTGGAGATAACATTTTGGTAGTTGAAGCAGAAACCAATCAAAGGTCAGTTCAATTCAGGTTCCGGGGCTaGGCCTCGATGTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: SGDNILVVEAETNQRSVQFRFRG*ASMFSR
Trigger: GCGGGAGAACATCGAGGCCAAGCCCCGGAACCTGAA...TTGAACTGACCTTTGATTGGTTTCTGCTTCAACTACCAAAATGTTATCTCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS TCA 90 bp ACCTCTTGGCGTACTTATAAATCTCTGCCATGGCCACATTGGTGTTaGACTCATTCTGGTATTTCTATAAGGAGGCAGGATGGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: TSWRTYKSLPWPHWC*THSGISIRRQDGEE
Trigger: CTCCTCCCCATCCTGCCTCCTTATAGAAATACCAGAATGAGTTCAACACCAATGTGGCCATGGCAGAGATTTATAAGTACGCCAAGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501038.6
CDS TCA 72 bp GGGTGCTCGCACGAGGCCTGCGGCAGCTGCGGAGCGTaGCACAGCGGGCTGTCGGGCACCGGGCCCACGGCC +
Preference number: 6 (lower is better)
Translates to: GCSHEACGSCGA*HSGLSGTGPTA
Trigger: GGCCGTGGGCCCGGTGCCCGACAGCCCGCTGTGTCACGCTCCGCAGCTGCCGCAGGCCTCGTGCGAGCACCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 72 bp GCAGGCGTTTGGGCCTCGGGCCAGCCCCCGGGAGTGTaGGTGCTGGGCGGGCCGGACAGTGGGCTGCAGCCC +
Preference number: 6 (lower is better)
Translates to: AGVWASGQPPGV*VLGGPDSGLQP
Trigger: GGGCTGCAGCCCACTGTCCGGCCCGCCCAGCACGCACACTCCCGGGGGCTGGCCCGAGGCCCAAACGCCTGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515191.1
CDS TCA 72 bp GGTTGGCCGCCACGTTCAGCATGCTGGGGAACACCGTaGCGGGCTCGGCGGGCGGCGCGGCGGGCGGGAAGC +
Preference number: 6 (lower is better)
Translates to: GWPPRSACWGTP*RARRAARRAGS
Trigger: GCTTCCCGCCCGCCGCGCCGCCCGCCGAGCCCGTCACGGTGTTCCCCAGCATGCTGAACGTGGCGGCCAACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 72 bp CGTAACCGGTGTACGTGGCGCCCACGAGCAGGCGGCTaGCCCCCGCGCCCGCGGCGGGAGGCAGAACTAGCC +
Preference number: 6 (lower is better)
Translates to: RNRCTWRPRAGG*PPRPRREAELA
Trigger: GGCTAGTTCTGCCTCCCGCCGCGGGCGCGGGGGGCAGCCGCCTGCTCGTGGGCGCCACGTACACCGGTTACG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 72 bp CGGCGGGCGGGAAGCGCACGGCCACGGCCGAGATGTTaGCCCGGCGCCGCAGCTGGCAGAAGCCCTGGTAGA +
Preference number: 6 (lower is better)
Translates to: RRAGSARPRPRC*PGAAAGRSPGR
Trigger: TCTACCAGGGCTTCTGCCAGCTGCGGCGCCGGGGCAACATCTCGGCCGTGGCCGTGCGCTTCCCGCCCGCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 72 bp TCTTGGCGTCGCCGCCGGCGCCGTGGGGCAGGCAGATaGGCGCCAGCAGGCTCCGCGCCTGGCTCTCCTTGT +
Preference number: 6 (lower is better)
Translates to: SWRRRRRRGAGR*APAGSAPGSPC
Trigger: ACAAGGAGAGCCAGGCGCGGAGCCTGCTGGCGCGCATCTGCCTGCCCCACGGCGCCGGCGGCGACGCCAAGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 72 bp AAGTTGTTGGTGGGCGTGGGCGAGGGGAACCGACGCTaGATCTCCAGGGCGCCGGCCCGCGCCGCCCCCAGG +
Preference number: 6 (lower is better)
Translates to: KLLVGVGEGNRR*ISRAPARAAPR
Trigger: CCTGGGGGCGGCGCGGGCCGGCGCCCTGGAGATCCAGCGTCGGTTCCCCTCGCCCACGCCCACCAACAACTT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 72 bp TGGGGCAGGCAGATGCGCGCCAGCAGGCTCCGCGCCTaGCTCTCCTTGTCGCCCGCGCGCGCCTCGCTGTTG +
Preference number: 6 (lower is better)
Translates to: WGRQMRASRLRA*LSLSPARASLL
Trigger: CAACAGCGAGGCGCGCGCGGGCGACAAGGAGAGCCAGGCGCGGAGCCTGCTGGCGCGCATCTGCCTGCCCCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CAA 72 bp CAGATGCGCGCCAGCAGGCTCCGCGCCTGGCTCTCCTaGTCGCCCGCGCGCGCCTCGCTGTTGAGCGCCAGG +
Preference number: 6 (lower is better)
Translates to: QMRASRLRAWLS*SPARASLLSAR
Trigger: CCTGGCGCTCAACAGCGAGGCGCGCGCGGGCGACAAGGAGAGCCAGGCGCGGAGCCTGCTGGCGCGCATCTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CAA 90 bp CTCCAGGGAGTGGACCAGGGGCAGCTGTGGGAGGAAGGCAGGCGTTaGGGCCTCGGGCCAGCCCCCGGGAGTGTGCGTGCTGGGCGGGCC +
Preference number: 6 (lower is better)
Translates to: LQGVDQGQLWEEGRR*GLGPAPGSVRAGRA
Trigger: GGCCCGCCCAGCACGCACACTCCCGGGGGCTGGCCCGAGGCCCAAACGCCTGCCTTCCTCCCACAGCTGCCCCTGGTCCACTCCCTGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515191.1
CDS CCA 72 bp CCGCCGCGCCGTCCAGGGCGAAGTTGTTGGTGGGCGTaGGCGAGGGGAACCGACGCTGGATCTCCAGGGCGC +
Preference number: 6 (lower is better)
Translates to: PPRRPGRSCWWA*ARGTDAGSPGR
Trigger: GCGCCCTGGAGATCCAGCGTCGGTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCGCGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 72 bp CCGCGCCCGCGGCGGGAGGCAGAACTAGCCCCACGGTaGACGCGTTCGGGTGGTTGGCCGCCACGTTCAGCA +
Preference number: 6 (lower is better)
Translates to: PRPRREAELAPR*TRSGGWPPRSA
Trigger: TGCTGAACGTGGCGGCCAACCACCCGAACGCGTCCACCGTGGGGCTAGTTCTGCCTCCCGCCGCGGGCGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CAA 90 bp GCCGCCAGGTACACGGTCCCCGCCGCGCCGTCCAGGGCGAAGTTGTaGGTGGGCGTGGGCGAGGGGAACCGACGCTGGATCTCCAGGGCG +
Preference number: 6 (lower is better)
Translates to: AARYTVPAAPSRAKL*VGVGEGNRRWISRA
Trigger: CGCCCTGGAGATCCAGCGTCGGTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCGCGGCGGGGACCGTGTACCTGGCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CAA 90 bp ACGGCCGCCAGGTACACGGTCCCCGCCGCGCCGTCCAGGGCGAAGTaGTTGGTGGGCGTGGGCGAGGGGAACCGACGCTGGATCTCCAGG +
Preference number: 6 (lower is better)
Translates to: TAARYTVPAAPSRAK*LVGVGEGNRRWISR
Trigger: CCTGGAGATCCAGCGTCGGTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCGCGGCGGGGACCGTGTACCTGGCGGCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS TCA 72 bp CCTGGCTCTCCTTGTCGCCCGCGCGCGCCTCGCTGTTaGGCGCCAGGTACGCGTAGGACTGTGCACCCGGCG +
Preference number: 6 (lower is better)
Translates to: PGSPCRPRAPRC*APGTRRTVHPA
Trigger: CGCCGGGTGCACAGTCCTACGCGTACCTGGCGCTCAACAGCGAGGCGCGCGCGGGCGACAAGGAGAGCCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 72 bp CGCCTCGCTGTTGAGCGCCAGGTACGCGTAGGACTGTaGACCCGGCGGCGGGTCGGACGGGTGCAGGAAGGC +
Preference number: 6 (lower is better)
Translates to: RLAVERQVRVGL*TRRRVGRVQEG
Trigger: GCCTTCCTGCACCCGTCCGACCCGCCGCCGGGTGCACAGTCCTACGCGTACCTGGCGCTCAACAGCGAGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 72 bp GCTCCGGCGCCCCATCCACTCACTGTGATGGGCAGCTaGCCCACGGCCGCGCCCAGGGACTCGTTGACCGAG +
Preference number: 6 (lower is better)
Translates to: APAPHPLTVMGS*PTAAPRDSLTE
Trigger: CTCGGTCAACGAGTCCCTGGGCGCGGCCGTGGGGCAGCTGCCCATCACAGTGAGTGGATGGGGCGCCGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504767.5
CDS CCA 72 bp CGGTCCCCGCCGCGCCGTCCAGGGCGAAGTTGTTGGTaGGCGTGGGCGAGGGGAACCGACGCTGGATCTCCA +
Preference number: 6 (lower is better)
Translates to: RSPPRRPGRSCW*AWARGTDAGSP
Trigger: TGGAGATCCAGCGTCGGTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCGCGGCGGGGACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 72 bp TGCCCCGGCGCCGCAGCTGGCAGAAGCCCTGGTAGATaGACCCGCACACGACTACCAGGCCCTGGCCGGGGT +
Preference number: 6 (lower is better)
Translates to: CPGAAAGRSPGR*TRTRLPGPGRG
Trigger: ACCCCGGCCAGGGCCTGGTAGTCGTGTGCGGGTCCATCTACCAGGGCTTCTGCCAGCTGCGGCGCCGGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 72 bp CCGGTTCCACGAAGCAGGCGGTGCGCGCAGCTCGGATaGCGGCTCGCACGTCGGCGAAGCGGAAGGCGCAGA +
Preference number: 6 (lower is better)
Translates to: PVPRSRRCAQLG*RLARRRSGRRR
Trigger: TCTGCGCCTTCCGCTTCGCCGACGTGCGAGCCGCCATCCGAGCTGCGCGCACCGCCTGCTTCGTGGAACCGG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CAA 72 bp AGGTACACGGTCCCCGCCGCGCCGTCCAGGGCGAAGTaGTTGGTGGGCGTGGGCGAGGGGAACCGACGCTGG +
Preference number: 6 (lower is better)
Translates to: RYTVPAAPSRAK*LVGVGEGNRRW
Trigger: CCAGCGTCGGTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCGCGGCGGGGACCGTGTACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 72 bp ACACGGTCCCCGCCGCGCCGTCCAGGGCGAAGTTGTTaGTGGGCGTGGGCGAGGGGAACCGACGCTGGATCT +
Preference number: 6 (lower is better)
Translates to: TRSPPRRPGRSC*WAWARGTDAGS
Trigger: AGATCCAGCGTCGGTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCGCGGCGGGGACCGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CAA 72 bp TACACGGTCCCCGCCGCGCCGTCCAGGGCGAAGTTGTaGGTGGGCGTGGGCGAGGGGAACCGACGCTGGATC +
Preference number: 6 (lower is better)
Translates to: YTVPAAPSRAKL*VGVGEGNRRWI
Trigger: GATCCAGCGTCGGTTCCCCTCGCCCACGCCCACCAACAACTTCGCCCTGGACGGCGCGGCGGGGACCGTGTA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CAA 90 bp GCGGCGGGAGGCAGAACTAGCCCCACGGTGGACGCGTTCGGGTGGTaGGCCGCCACGTTCAGCATGCTGGGGAACACCGTGACGGGCTCG +
Preference number: 6 (lower is better)
Translates to: AAGGRTSPTVDAFGW*AATFSMLGNTVTGS
Trigger: CGAGCCCGTCACGGTGTTCCCCAGCATGCTGAACGTGGCGGCCAACCACCCGAACGCGTCCACCGTGGGGCTAGTTCTGCCTCCCGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS TCA 72 bp CCGCGCACTGCAAGCCCAACTGGATGTAGGACTCGGTaGGCTTCTTGGCGTCGCCGCCGGCGCCGTGGGGCA +
Preference number: 6 (lower is better)
Translates to: PRTASPTGCRTR*ASWRRRRRRGA
Trigger: TGCCCCACGGCGCCGGCGGCGACGCCAAGAAGCTCACCGAGTCCTACATCCAGTTGGGCTTGCAGTGCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 72 bp ATGTTGAGCTTGCGCTCACAGGCCGGTCCCGTGCCCTaGACCACGCTGTCGAGCACCGCCACCACGTCGGGC +
Preference number: 6 (lower is better)
Translates to: MLSLRSQAGPVP*TTLSSTATTSG
Trigger: GCCCGACGTGGTGGCGGTGCTCGACAGCGTGGTGCAGGGCACGGGACCGGCCTGTGAGCGCAAGCTCAACAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 72 bp CCGCACCCACGCAGTCCCCACAGGTGGAGTGCACGTTaGAGGCGGCGACCTTCACCCTGGCCATCTGGTGGG +
Preference number: 6 (lower is better)
Translates to: PHPRSPHRWSAR*RRRPSPWPSGG
Trigger: CCCACCAGATGGCCAGGGTGAAGGTCGCCGCCTGCAACGTGCACTCCACCTGTGGGGACTGCGTGGGTGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000505237.2
ENST00000505665.5
CDS GCA 72 bp GCAGAGGCCCCCGCAGGCGGCAGCCATCACTCCACATaGACAGGTGACCCAGGTCTTCGCGGCCCAGGCACT +
Preference number: 6 (lower is better)
Translates to: AEAPAGGSHHST*TGDPGLRGPGT
Trigger: AGTGCCTGGGCCGCGAAGACCTGGGTCACCTGTGCATGTGGAGTGATGGCTGCCGCCTGCGGGGGCCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505505.1
CDS CCA 72 bp GCTTGGCCAGGTCGCCGCGCGTGTCCAGGGAGCGGATaGCGATCTCGGGCGTGTTCTCGAAGCGGTGGTCCT +
Preference number: 6 (lower is better)
Translates to: AWPGRRACPGSG*RSRACSRSGGP
Trigger: AGGACCACCGCTTCGAGAACACGCCCGAGATCGCCATCCGCTCCCTGGACACGCGCGGCGACCTGGCCAAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 72 bp GGGCCGCTCGAAGACAGCAAAGAGCCGCTCCCGGGCTaGGAAGACCGACACCAGGCGGCTGTAGAGGTCGCC +
Preference number: 6 (lower is better)
Translates to: GPLEDSKEPLPG*EDRHQAAVEVA
Trigger: GGCGACCTCTACAGCCGCCTGGTGTCGGTCTTCCCAGCCCGGGAGCGGCTCTTTGCTGTCTTCGAGCGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 72 bp AGTAGGCGTCCGCCGCACCCACGCAGTCCCCACAGGTaGAGTGCACGTTGCAGGCGGCGACCTTCACCCTGG +
Preference number: 6 (lower is better)
Translates to: SRRPPHPRSPHR*SARCRRRPSPW
Trigger: CCAGGGTGAAGGTCGCCGCCTGCAACGTGCACTCCACCTGTGGGGACTGCGTGGGTGCGGCGGACGCCTACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000505237.2
ENST00000505665.5
CDS CAA 72 bp GCCGCACCCACGCAGTCCCCACAGGTGGAGTGCACGTaGCAGGCGGCGACCTTCACCCTGGCCATCTGGTGG +
Preference number: 6 (lower is better)
Translates to: AAPTQSPQVECT*QAATFTLAIWW
Trigger: CCACCAGATGGCCAGGGTGAAGGTCGCCGCCTGCAACGTGCACTCCACCTGTGGGGACTGCGTGGGTGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000505237.2
ENST00000505665.5
CDS TCA 72 bp CGGGGTCCAGCTGCAGGATCTTGTTGTAGTTGTCCGTaGGGCGCCGCGGGTGCTCGCACGAGGCCTGCGGCA +
Preference number: 6 (lower is better)
Translates to: RGPAAGSCCSCP*GAAGARTRPAA
Trigger: TGCCGCAGGCCTCGTGCGAGCACCCGCGGCGCCTCACGGACAACTACAACAAGATCCTGCAGCTGGACCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS TCA 72 bp CCCCGCAGGCGGCAGCCATCACTCCACATGCACAGGTaGCCCAGGTCTTCGCGGCCCAGGCACTGGGAACAG +
Preference number: 6 (lower is better)
Translates to: PRRRQPSLHMHR*PRSSRPRHWEQ
Trigger: CTGTTCCCAGTGCCTGGGCCGCGAAGACCTGGGTCACCTGTGCATGTGGAGTGATGGCTGCCGCCTGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505505.1
CDS GCA 72 bp GAGCCGGCAGGGCCCCCTCAGGCATGGTGCAGGCGATaGTGGTATCTGTGCGCATCAGCTCCGTGCAGGGGT +
Preference number: 6 (lower is better)
Translates to: EPAGPPQAWCRR*WYLCASAPCRG
Trigger: ACCCCTGCACGGAGCTGATGCGCACAGATACCAGCATCGCCTGCACCATGCCTGAGGGGGCCCTGCCGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000515191.1
CDS CCA 72 bp CCGGCAGGGCCCCCTCAGGCATGGTGCAGGCGATGCTaGTATCTGTGCGCATCAGCTCCGTGCAGGGGTCTG +
Preference number: 6 (lower is better)
Translates to: PAGPPQAWCRRC*YLCASAPCRGL
Trigger: CAGACCCCTGCACGGAGCTGATGCGCACAGATACCAGCATCGCCTGCACCATGCCTGAGGGGGCCCTGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000515191.1
CDS CCA 72 bp GGACGGTCATGGCAGGACAGCGGCTGGGGCCCTCGCTaGCACTGGTCCAGAAATGCTGCTGGCGCGTCTCCA +
Preference number: 6 (lower is better)
Translates to: GRSWQDSGWGPR*HWSRNAAGASP
Trigger: TGGAGACGCGCCAGCAGCATTTCTGGACCAGTGCCAGCGAGGGCCCCAGCCGCTGTCCTGCCATGACCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505237.2
CDS TCA 72 bp CCACACCACCAATCCACACGCCGTGGGCCACGTCACTaGGCCGCCGGCCCAGGTTCCTTCCTCGGATGGTCA +
Preference number: 6 (lower is better)
Translates to: PHHQSTRRGPRH*AAGPGSFLGWS
Trigger: TGACCATCCGAGGAAGGAACCTGGGCCGGCGGCTCAGTGACGTGGCCCACGGCGTGTGGATTGGTGGTGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS TCA 72 bp GTAGGCCCGCCCATTGATGAAGAAGTCCACTGGCGCTaGTGCGTTGCTCAGGGCCCCGGGGGACGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: VGPPIDEEVHWR*CVAQGPGGRAG
Trigger: ACCTGCCCGTCCCCCGGGGCCCTGAGCAACGCATCAGCGCCAGTGGACTTCTTCATCAATGGGCGGGCCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000511018.1
CDS GCA 72 bp TCTCGGGCGTGTTCTCGAAGCGGTGGTCCTCCAGGCTaGGGTTGCGCGGGAAGAAGGAGCTGCCGTAACCGG +
Preference number: 6 (lower is better)
Translates to: SRACSRSGGPPG*GCAGRRSCRNR
Trigger: CCGGTTACGGCAGCTCCTTCTTCCCGCGCAACCGCAGCCTGGAGGACCACCGCTTCGAGAACACGCCCGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 72 bp ACTGTGGGTTGGGGAGGTAGTCCAGGCGGAACCTGCTaGCCCGCTGTGCCTCCTCGGGGTCCAGTAGCTCCT +
Preference number: 6 (lower is better)
Translates to: TVGWGGSPGGTC*PAVPPRGPVAP
Trigger: AGGAGCTACTGGACCCCGAGGAGGCACAGCGGGGCAGCAGGTTCCGCCTGGACTACCTCCCCAACCCACAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000511018.1
ENST00000514990.1
CDS CCA 72 bp GGAGGCAGAACTAGCCCCACGGTGGACGCGTTCGGGTaGTTGGCCGCCACGTTCAGCATGCTGGGGAACACC +
Preference number: 6 (lower is better)
Translates to: GGRTSPTVDAFG*LAATFSMLGNT
Trigger: GGTGTTCCCCAGCATGCTGAACGTGGCGGCCAACCACCCGAACGCGTCCACCGTGGGGCTAGTTCTGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 72 bp GAGCGGATGGCGATCTCGGGCGTGTTCTCGAAGCGGTaGTCCTCCAGGCTGCGGTTGCGCGGGAAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: ERMAISGVFSKR*SSRLRLRGKKE
Trigger: CTCCTTCTTCCCGCGCAACCGCAGCCTGGAGGACCACCGCTTCGAGAACACGCCCGAGATCGCCATCCGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 72 bp GGGCTGTCCAGGAATCGGGCTGGCCGCCCCTTTAGTTaGAGGCTGAGCGGGAACACCTGGCTCTTCCGGGTC +
Preference number: 6 (lower is better)
Translates to: GLSRNRAGRPFS*RLSGNTWLFRV
Trigger: GACCCGGAAGAGCCAGGTGTTCCCGCTCAGCCTCCAACTAAAGGGGCGGCCAGCCCGATTCCTGGACAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505505.1
CDS CCA 72 bp AGTGGCTCACAGGCCACACCACCAATCCACACGCCGTaGGCCACGTCACTGAGCCGCCGGCCCAGGTTCCTT +
Preference number: 6 (lower is better)
Translates to: SGSQATPPIHTP*ATSLSRRPRFL
Trigger: AAGGAACCTGGGCCGGCGGCTCAGTGACGTGGCCCACGGCGTGTGGATTGGTGGTGTGGCCTGTGAGCCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 72 bp ATGGCCCGCACGCTCAGCGAGTCCATGCCACAGCCCTaGAAGGACACGTTCAGGTTCCGGGGCTTGGCCTCG +
Preference number: 6 (lower is better)
Translates to: MARTLSESMPQP*KDTFRFRGLAS
Trigger: CGAGGCCAAGCCCCGGAACCTGAACGTGTCCTTCCAGGGCTGTGGCATGGACTCGCTGAGCGTGCGGGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504979.1
ENST00000512744.5
CDS CAA 72 bp GGCAGAACTAGCCCCACGGTGGACGCGTTCGGGTGGTaGGCCGCCACGTTCAGCATGCTGGGGAACACCGTG +
Preference number: 6 (lower is better)
Translates to: GRTSPTVDAFGW*AATFSMLGNTV
Trigger: CACGGTGTTCCCCAGCATGCTGAACGTGGCGGCCAACCACCCGAACGCGTCCACCGTGGGGCTAGTTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CAA 90 bp GGCGGCGGGTCGGACGGGTGCAGGAAGGCGCTCACGAAGCCCAGCTaGTGCTGCTCCTTGGCGCCCTGCTTGATCTTGAGGATGTTGTCG +
Preference number: 6 (lower is better)
Translates to: GGGSDGCRKALTKPS*CCSLAPCLILRMLS
Trigger: CGACAACATCCTCAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGAGCGCCTTCCTGCACCCGTCCGACCCGCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS TCA 72 bp CCAGGAATCGGGCTGGCCGCCCCTTTAGTTGGAGGCTaGGCGGGAACACCTGGCTCTTCCGGGTCGTGTGCA +
Preference number: 6 (lower is better)
Translates to: PGIGLAAPLVGG*AGTPGSSGSCA
Trigger: TGCACACGACCCGGAAGAGCCAGGTGTTCCCGCTCAGCCTCCAACTAAAGGGGCGGCCAGCCCGATTCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505505.1
CDS GCA 72 bp GCGTGTTCTCGAAGCGGTGGTCCTCCAGGCTGCGGTTaGGCGGGAAGAAGGAGCTGCCGTAACCGGTGTACG +
Preference number: 6 (lower is better)
Translates to: ACSRSGGPPGCG*AGRRSCRNRCT
Trigger: CGTACACCGGTTACGGCAGCTCCTTCTTCCCGCGCAACCGCAGCCTGGAGGACCACCGCTTCGAGAACACGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 72 bp GGACGGTCATGGCAGGACAGCGGCTGGGGCCCTCGCTaGCACTGGTCCAGAAATGCTGCTGGCTGGAATTGG +
Preference number: 6 (lower is better)
Translates to: GRSWQDSGWGPR*HWSRNAAGWNW
Trigger: CCAATTCCAGCCAGCAGCATTTCTGGACCAGTGCCAGCGAGGGCCCCAGCCGCTGTCCTGCCATGACCGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505665.5
CDS CCA 72 bp TCTCGGAAGGCAGGACGGTCATGGCAGGACAGCGGCTaGGGCCCTCGCTGGCACTGGTCCAGAAATGCTGCT +
Preference number: 6 (lower is better)
Translates to: SRKAGRSWQDSG*GPRWHWSRNAA
Trigger: AGCAGCATTTCTGGACCAGTGCCAGCGAGGGCCCCAGCCGCTGTCCTGCCATGACCGTCCTGCCTTCCGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000505237.2
ENST00000505665.5
CDS CCA 72 bp GGCCGCCCCTTTAGTTGGAGGCTGAGCGGGAACACCTaGCTCTTCCGGGTCGTGTGCAGCACCACCTGGTCA +
Preference number: 6 (lower is better)
Translates to: GRPFSWRLSGNT*LFRVVCSTTWS
Trigger: TGACCAGGTGGTGCTGCACACGACCCGGAAGAGCCAGGTGTTCCCGCTCAGCCTCCAACTAAAGGGGCGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505505.1
CDS CCA 72 bp ACCTGGAGCTCGGAGCCTACATGGAGGTCATTCCCATaGATGGTGATCCTGGTGCCCCCGGCCTTGGGGCCC +
Preference number: 6 (lower is better)
Translates to: TWSSEPTWRSFP*MVILVPPALGP
Trigger: GGGCCCCAAGGCCGGGGGCACCAGGATCACCATCCATGGGAATGACCTCCATGTAGGCTCCGAGCTCCAGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000515191.1
CDS CAA 72 bp TCATTCCCATGGATGGTGATCCTGGTGCCCCCGGCCTaGGGGCCCATGGTAGGCTCCAGGGAGTGGACCAGG +
Preference number: 6 (lower is better)
Translates to: SFPWMVILVPPA*GPMVGSREWTR
Trigger: CCTGGTCCACTCCCTGGAGCCTACCATGGGCCCCAAGGCCGGGGGCACCAGGATCACCATCCATGGGAATGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000515191.1
CDS CAA 72 bp CGCCCATTGATGAAGAAGTCCACTGGCGCTGATGCGTaGCTCAGGGCCCCGGGGGACGGGCAGGTGATGAGG +
Preference number: 6 (lower is better)
Translates to: RPLMKKSTGADA*LRAPGDGQVMR
Trigger: CCTCATCACCTGCCCGTCCCCCGGGGCCCTGAGCAACGCATCAGCGCCAGTGGACTTCTTCATCAATGGGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000511018.1
CDS CAA 90 bp CTGGGGCCCTCGCTGGCACTGGTCCAGAAATGCTGCTGGCTGGAATaGGTGCAGTCCTGCTGCAAGGTGCACCGCGTCTCCAGGGCACAC +
Preference number: 6 (lower is better)
Translates to: LGPSLALVQKCCWLE*VQSCCKVHRVSRAH
Trigger: GTGTGCCCTGGAGACGCGGTGCACCTTGCAGCAGGACTGCACCAATTCCAGCCAGCAGCATTTCTGGACCAGTGCCAGCGAGGGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505665.5
CDS GCA 72 bp CAGCGGCTGGGGCCCTCGCTGGCACTGGTCCAGAAATaGTGCTGGCTGGAATTGGTGCAGTCCTGCTGCAAG +
Preference number: 6 (lower is better)
Translates to: QRLGPSLALVQK*CWLELVQSCCK
Trigger: CTTGCAGCAGGACTGCACCAATTCCAGCCAGCAGCATTTCTGGACCAGTGCCAGCGAGGGCCCCAGCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505665.5
CDS GCA 72 bp GGGGGAAGGGCGGAAACTGGTCCCTCGGCAGGAGGTTaGAGTAGGCAATCTGGTGACCAAAGGCAGGGCCTG +
Preference number: 6 (lower is better)
Translates to: GGRAETGPSAGG*SRQSGDQRQGL
Trigger: CAGGCCCTGCCTTTGGTCACCAGATTGCCTACTGCAACCTCCTGCCGAGGGACCAGTTTCCGCCCTTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 72 bp GGAGTGCTGCTGGCTGCACCAGAAACAGGGCCACTGTaGCGACAGGCAGCTGGTACAGGCTGTGTGGGGGTA +
Preference number: 6 (lower is better)
Translates to: GVLLAAPETGPL*RQAAGTGCVGV
Trigger: TACCCCCACACAGCCTGTACCAGCTGCCTGTCGGCACAGTGGCCCTGTTTCTGGTGCAGCCAGCAGCACTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 72 bp GGGCTCGTGGGGTTTGGTGAGGCCTCGCACCGAGACTaGTTGGAAACACAGGAGTGCTGCTGGCTGCACCAG +
Preference number: 6 (lower is better)
Translates to: GLVGFGEASHRD*LETQECCWLHQ
Trigger: CTGGTGCAGCCAGCAGCACTCCTGTGTTTCCAACCAGTCTCGGTGCGAGGCCTCACCAAACCCCACGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 72 bp TCCCATCTGCCAATCTTCAGAGGGGCTGGGGCAAGGTaGCAAGCCTGCCCTCCAAGGTGTCCTGAGGGTGGG +
Preference number: 6 (lower is better)
Translates to: SHLPIFRGAGAR*QACPPRCPEGG
Trigger: CCCACCCTCAGGACACCTTGGAGGGCAGGCTTGCCACCTTGCCCCAGCCCCTCTGAAGATTGGCAGATGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514990.1
CDS CAA 72 bp TCGGACGGGTGCAGGAAGGCGCTCACGAAGCCCAGCTaGTGCTGCTCCTTGGCGCCCTGCTTGATCTTGAGG +
Preference number: 6 (lower is better)
Translates to: SDGCRKALTKPS*CCSLAPCLILR
Trigger: CCTCAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGAGCGCCTTCCTGCACCCGTCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CAA 72 bp ACAGACTCTGTGCGCCGCAGCATGAGCTTGGGGTTCTaGGCGGCCGAGGCGTCAATGAGGTCCACCAGCAGC +
Preference number: 6 (lower is better)
Translates to: TDSVRRSMSLGF*AAEASMRSTSS
Trigger: GCTGCTGGTGGACCTCATTGACGCCTCGGCCGCCAAGAACCCCAAGCTCATGCTGCGGCGCACAGAGTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000503166.1
ENST00000512744.5
CDS CAA 90 bp TTGAGGATGTTGTCGTCGGAGGGGTTGAGGTCGAAGGTGAAGAGCTaGGCCAGGTCGCCGCGCGTGTCCAGGGAGCGGATGGCGATCTCG +
Preference number: 6 (lower is better)
Translates to: LRMLSSEGLRSKVKS*ARSPRVSRERMAIS
Trigger: CGAGATCGCCATCCGCTCCCTGGACACGCGCGGCGACCTGGCCAAGCTCTTCACCTTCGACCTCAACCCCTCCGACGACAACATCCTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CAA 90 bp CTGATGGCCGTGATGACCGGGTTCTGCATGTACCAGAAGGTGAGGTaGCCGTGCACGCAGCCCCGACGCTCGAAGCGCACACACACAGGC +
Preference number: 6 (lower is better)
Translates to: LMAVMTGFCMYQKVR*PCTQPRRSKRTHTG
Trigger: GCCTGTGTGTGTGCGCTTCGAGCGTCGGGGCTGCGTGCACGGCAACCTCACCTTCTGGTACATGCAGAACCCGGTCATCACGGCCATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000511018.1
ENST00000515191.1
CDS CAA 90 bp TCCTTGGCGCCCTGCTTGATCTTGAGGATGTTGTCGTCGGAGGGGTaGAGGTCGAAGGTGAAGAGCTTGGCCAGGTCGCCGCGCGTGTCC +
Preference number: 6 (lower is better)
Translates to: SLAPCLILRMLSSEG*RSKVKSLARSPRVS
Trigger: GGACACGCGCGGCGACCTGGCCAAGCTCTTCACCTTCGACCTCAACCCCTCCGACGACAACATCCTCAAGATCAAGCAGGGCGCCAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CAA 90 bp GACGGGTGCAGGAAGGCGCTCACGAAGCCCAGCTTGTGCTGCTCCTaGGCGCCCTGCTTGATCTTGAGGATGTTGTCGTCGGAGGGGTTG +
Preference number: 6 (lower is better)
Translates to: DGCRKALTKPSLCCS*APCLILRMLSSEGL
Trigger: CAACCCCTCCGACGACAACATCCTCAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGAGCGCCTTCCTGCACCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS TCA 72 bp ATTTCCGGGAGCACCTTCTTGCGATGGCTCTGCCGGTaGGACTTCTTGGGCTCCGCCAGCTCGTCCGTAGGC +
Preference number: 6 (lower is better)
Translates to: ISGSTFLRWLCR*DFLGSASSSVG
Trigger: GCCTACGGACGAGCTGGCGGAGCCCAAGAAGTCTCACCGGCAGAGCCATCGCAAGAAGGTGCTCCCGGAAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324093.9
ENST00000506979.1
ENST00000508630.1
ENST00000512744.5
CDS GCA 72 bp GACGGGTGCAGGAAGGCGCTCACGAAGCCCAGCTTGTaGTGCTCCTTGGCGCCCTGCTTGATCTTGAGGATG +
Preference number: 6 (lower is better)
Translates to: DGCRKALTKPSL*CSLAPCLILRM
Trigger: CATCCTCAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGAGCGCCTTCCTGCACCCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 72 bp GCCTCGCACCGAGACTGGTTGGAAACACAGGAGTGCTaGTGGCTGCACCAGAAACAGGGCCACTGTGCCGAC +
Preference number: 6 (lower is better)
Translates to: ASHRDWLETQEC*WLHQKQGHCAD
Trigger: GTCGGCACAGTGGCCCTGTTTCTGGTGCAGCCAGCAGCACTCCTGTGTTTCCAACCAGTCTCGGTGCGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 72 bp GAGGCCTCGCACCGAGACTGGTTGGAAACACAGGAGTaGTGCTGGCTGCACCAGAAACAGGGCCACTGTGCC +
Preference number: 6 (lower is better)
Translates to: EASHRDWLETQE*CWLHQKQGHCA
Trigger: GGCACAGTGGCCCTGTTTCTGGTGCAGCCAGCAGCACTCCTGTGTTTCCAACCAGTCTCGGTGCGAGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 72 bp GCCAGGCTGCACCTGTCGCGCACCGCAAAGTCCTTCTaGTGCTCCAGCGCGTGGACAAAGACGATGAGGAAG +
Preference number: 6 (lower is better)
Translates to: ARLHLSRTAKSF*CSSAWTKTMRK
Trigger: CTTCCTCATCGTCTTTGTCCACGCGCTGGAGCAGCAGAAGGACTTTGCGGTGCGCGACAGGTGCAGCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000503166.1
ENST00000512744.5
CDS CCA 72 bp AAAAAGGCAGTGTTGGCCAGAGGCACCAGGATGTTCTaGGAGCCACCCGTAGGCACGGGTGCCAGGGGTGAG +
Preference number: 6 (lower is better)
Translates to: KKAVLARGTRMF*EPPVGTGARGE
Trigger: CTCACCCCTGGCACCCGTGCCTACGGGTGGCTCCCAGAACATCCTGGTGCCTCTGGCCAACACTGCCTTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505505.1
CDS CCA 72 bp TCCTGCCTTCTCCCATCTGCCAATCTTCAGAGGGGCTaGGGCAAGGTGGCAAGCCTGCCCTCCAAGGTGTCC +
Preference number: 6 (lower is better)
Translates to: SCLLPSANLQRG*GKVASLPSKVS
Trigger: GGACACCTTGGAGGGCAGGCTTGCCACCTTGCCCCAGCCCCTCTGAAGATTGGCAGATGGGAGAAGGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514990.1
CDS CCA 72 bp TCCCCTGGCCACCTAACATCTTCTACCCATTGGTGCTaGAGCCAGGGCACACCTCCCCCAACCTCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: SPGHLTSSTHWC*SQGTPPPTSGC
Trigger: GCACCCAGAGGTTGGGGGAGGTGTGCCCTGGCTCCAGCACCAATGGGTAGAAGATGTTAGGTGGCCAGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514990.1
CDS CAA 72 bp ATGGGCAGCTGCCCCACGGCCGCGCCCAGGGACTCGTaGACCGAGCAGTGGATGATTCTGTCAGAGACAATC +
Preference number: 6 (lower is better)
Translates to: MGSCPTAAPRDS*TEQWMILSETI
Trigger: GATTGTCTCTGACAGAATCATCCACTGCTCGGTCAACGAGTCCCTGGGCGCGGCCGTGGGGCAGCTGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000514990.1
CDS CAA 72 bp TTCTCCACCACAGACTCTGTGCGCCGCAGCATGAGCTaGGGGTTCTTGGCGGCCGAGGCGTCAATGAGGTCC +
Preference number: 6 (lower is better)
Translates to: FSTTDSVRRSMS*GFLAAEASMRS
Trigger: GGACCTCATTGACGCCTCGGCCGCCAAGAACCCCAAGCTCATGCTGCGGCGCACAGAGTCTGTGGTGGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000503166.1
ENST00000512744.5
CDS CAA 90 bp CTCACTGTGATGGGCAGCTGCCCCACGGCCGCGCCCAGGGACTCGTaGACCGAGCAGTGGATGATTCTGTCAGAGACAATCTGGATGTCG +
Preference number: 6 (lower is better)
Translates to: LTVMGSCPTAAPRDS*TEQWMILSETIWMS
Trigger: CGACATCCAGATTGTCTCTGACAGAATCATCCACTGCTCGGTCAACGAGTCCCTGGGCGCGGCCGTGGGGCAGCTGCCCATCACAGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504767.5
CDS GCA 72 bp GGGTGCAGGAAGGCGCTCACGAAGCCCAGCTTGTGCTaGTCCTTGGCGCCCTGCTTGATCTTGAGGATGTTG +
Preference number: 6 (lower is better)
Translates to: GCRKALTKPSLC*SLAPCLILRML
Trigger: CAACATCCTCAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGAGCGCCTTCCTGCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 72 bp TGGCACTGGTCCAGAAATGCTGCTGGCTGGAATTGGTaGAGTCCTGCTGCAAGGTGCACCGCGTCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: WHWSRNAAGWNW*SPAARCTASPG
Trigger: CCCTGGAGACGCGGTGCACCTTGCAGCAGGACTGCACCAATTCCAGCCAGCAGCATTTCTGGACCAGTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000505665.5
CDS GCA 72 bp GGTGACCAAAGGCAGGGCCTGGGACCCGAGCCACAGTaGGGATGTTGTTCCCATAGTCACAGGCCATCTCCA +
Preference number: 6 (lower is better)
Translates to: GDQRQGLGPEPQ*GCCSHSHRPSP
Trigger: TGGAGATGGCCTGTGACTATGGGAACAACATCCGCACTGTGGCTCGGGTCCCAGGCCCTGCCTTTGGTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 72 bp ACCGAGACTGGTTGGAAACACAGGAGTGCTGCTGGCTaGACCAGAAACAGGGCCACTGTGCCGACAGGCAGC +
Preference number: 6 (lower is better)
Translates to: TETGWKHRSAAG*TRNRATVPTGS
Trigger: GCTGCCTGTCGGCACAGTGGCCCTGTTTCTGGTGCAGCCAGCAGCACTCCTGTGTTTCCAACCAGTCTCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 72 bp AGGCTGCACCTGTCGCGCACCGCAAAGTCCTTCTGCTaGTCCAGCGCGTGGACAAAGACGATGAGGAAGTGC +
Preference number: 6 (lower is better)
Translates to: RLHLSRTAKSFC*SSAWTKTMRKC
Trigger: GCACTTCCTCATCGTCTTTGTCCACGCGCTGGAGCAGCAGAAGGACTTTGCGGTGCGCGACAGGTGCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000503166.1
ENST00000512744.5
CDS CCA 72 bp TCGCACCGAGACTGGTTGGAAACACAGGAGTGCTGCTaGCTGCACCAGAAACAGGGCCACTGTGCCGACAGG +
Preference number: 6 (lower is better)
Translates to: SHRDWLETQECC*LHQKQGHCADR
Trigger: CCTGTCGGCACAGTGGCCCTGTTTCTGGTGCAGCCAGCAGCACTCCTGTGTTTCCAACCAGTCTCGGTGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 72 bp CACGATCTCCTCCGACACCGTGTATCTGTCAGGCAGTaGCTCACAGGCCACACCACCAATCCACACGCCGTG +
Preference number: 6 (lower is better)
Translates to: HDLLRHRVSVRQ*LTGHTTNPHAV
Trigger: CACGGCGTGTGGATTGGTGGTGTGGCCTGTGAGCCACTGCCTGACAGATACACGGTGTCGGAGGAGATCGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 72 bp AGCTCCGTGCAGGGGTCTGTGTCGTTCACCAGGACCTaGAGCTCGGAGCCTACATGGAGGTCATTCCCATGG +
Preference number: 6 (lower is better)
Translates to: SSVQGSVSFTRT*SSEPTWRSFPW
Trigger: CCATGGGAATGACCTCCATGTAGGCTCCGAGCTCCAGGTCCTGGTGAACGACACAGACCCCTGCACGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000515191.1
CDS CCA 72 bp AGAGCGTGGGCTCCCGGCCAATGTGGTGGACGGCCATaGACACATTCTGCACCATGTGGAAACGCTCACCAG +
Preference number: 6 (lower is better)
Translates to: RAWAPGQCGGRP*THSAPCGNAHQ
Trigger: CTGGTGAGCGTTTCCACATGGTGCAGAATGTGTCCATGGCCGTCCACCACATTGGCCGGGAGCCCACGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000511018.1
CDS CCA 72 bp CCCACGGCCGCGCCCAGGGACTCGTTGACCGAGCAGTaGATGATTCTGTCAGAGACAATCTGGATGTCGCAG +
Preference number: 6 (lower is better)
Translates to: PTAAPRDSLTEQ*MILSETIWMSQ
Trigger: CTGCGACATCCAGATTGTCTCTGACAGAATCATCCACTGCTCGGTCAACGAGTCCCTGGGCGCGGCCGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000514990.1
CDS CAA 90 bp CCCAGCTTGTGCTGCTCCTTGGCGCCCTGCTTGATCTTGAGGATGTaGTCGTCGGAGGGGTTGAGGTCGAAGGTGAAGAGCTTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: PSLCCSLAPCLILRM*SSEGLRSKVKSLAR
Trigger: CCTGGCCAAGCTCTTCACCTTCGACCTCAACCCCTCCGACGACAACATCCTCAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CAA 90 bp AAGGCGCTCACGAAGCCCAGCTTGTGCTGCTCCTTGGCGCCCTGCTaGATCTTGAGGATGTTGTCGTCGGAGGGGTTGAGGTCGAAGGTG +
Preference number: 6 (lower is better)
Translates to: KALTKPSLCCSLAPC*ILRMLSSEGLRSKV
Trigger: CACCTTCGACCTCAACCCCTCCGACGACAACATCCTCAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGAGCGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CAA 90 bp TGCTCCTTGTGGATAACGAGGGTGAGAGGCTCCCCGGGGTGGTGCTaGATCCACTTCTCCCTCTTGGCCGTAGAGAACTGTGGGTTGGGG +
Preference number: 6 (lower is better)
Translates to: CSLWITRVRGSPGWC*IHFSLLAVENCGLG
Trigger: CCCCAACCCACAGTTCTCTACGGCCAAGAGGGAGAAGTGGATCAAGCACCACCCCGGGGAGCCTCTCACCCTCGTTATCCACAAGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000511018.1
ENST00000514990.1
CDS CAA 90 bp TGGATTGTGATGGGCAGCTGCCCCACGGCCGCGCCCAGGGACTCGTaGACCGAGCAGTGGATGATTCTGTCAGAGACAATCTGGATGTCG +
Preference number: 6 (lower is better)
Translates to: WIVMGSCPTAAPRDS*TEQWMILSETIWMS
Trigger: CGACATCCAGATTGTCTCTGACAGAATCATCCACTGCTCGGTCAACGAGTCCCTGGGCGCGGCCGTGGGGCAGCTGCCCATCACAATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000514990.1
CDS TCA 72 bp TCACCACACCTGAGAGTGGTCCTGGGGCTGGCCCTGTaGCACACACGATCTCCTCCGACACCGTGTATCTGT +
Preference number: 6 (lower is better)
Translates to: SPHLRVVLGLAL*HTRSPPTPCIC
Trigger: ACAGATACACGGTGTCGGAGGAGATCGTGTGTGTCACAGGGCCAGCCCCAGGACCACTCTCAGGTGTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 72 bp CTCACGAAGCCCAGCTTGTGCTGCTCCTTGGCGCCCTaGTTGATCTTGAGGATGTTGTCGTCGGAGGGGTTG +
Preference number: 6 (lower is better)
Translates to: LTKPSLCCSLAP*LILRMLSSEGL
Trigger: CAACCCCTCCGACGACAACATCCTCAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 72 bp GAGGAACACTTGGGGAAGAAGGTGCGGGTCACGAAGTaGTTATACTCCAGGAAGGGGATGCCCTGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: EEHLGKKVRVTK*LYSRKGMPWLR
Trigger: CCGCAGCCAGGGCATCCCCTTCCTGGAGTATAAGCACTTCGTGACCCGCACCTTCTTCCCCAAGTGTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 72 bp AGGTGTCGTCCAGGTCCCGAAGGATGTAGCTCTGTGTaGTGGAGGCGAACCACTCAAGGTCGACGTCCTCTG +
Preference number: 6 (lower is better)
Translates to: RCRPGPEGCSSV*WRRTTQGRRPL
Trigger: CAGAGGACGTCGACCTTGAGTGGTTCGCCTCCAGCACACAGAGCTACATCCTTCGGGACCTGGACGACACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS GCA 72 bp TGCTGGAGCCAGGGCACACCTCCCCCAACCTCTGGGTaGCTAACCTGTTCCCATGGCCAAGCCTTTGTTCAA +
Preference number: 6 (lower is better)
Translates to: CWSQGTPPPTSG*LTCSHGQAFVQ
Trigger: TTGAACAAAGGCTTGGCCATGGGAACAGGTTAGGCACCCAGAGGTTGGGGGAGGTGTGCCCTGGCTCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514990.1
CDS CCA 72 bp GTGTCGTTCACCAGGACCTGGAGCTCGGAGCCTACATaGAGGTCATTCCCATGGATGGTGATCCTGGTGCCC +
Preference number: 6 (lower is better)
Translates to: VSFTRTWSSEPT*RSFPWMVILVP
Trigger: GGGCACCAGGATCACCATCCATGGGAATGACCTCCATGTAGGCTCCGAGCTCCAGGTCCTGGTGAACGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000515191.1
CDS CCA 72 bp TTGAGAACCTTGCAGAGCGTGGGCTCCCGGCCAATGTaGTGGACGGCCATGGACACATTCTGCACCATGTGG +
Preference number: 6 (lower is better)
Translates to: LRTLQSVGSRPM*WTAMDTFCTMW
Trigger: CCACATGGTGCAGAATGTGTCCATGGCCGTCCACCACATTGGCCGGGAGCCCACGCTCTGCAAGGTTCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000511018.1
CDS CCA 72 bp CTTGATCCACTTCTCCCTCTTGGCCGTAGAGAACTGTaGGTTGGGGAGGTAGTCCAGGCGGAACCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: LDPLLPLGRREL*VGEVVQAEPAA
Trigger: GGCAGCAGGTTCCGCCTGGACTACCTCCCCAACCCACAGTTCTCTACGGCCAAGAGGGAGAAGTGGATCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000511018.1
ENST00000514990.1
CDS CCA 72 bp TCCTTGTGGATAACGAGGGTGAGAGGCTCCCCGGGGTaGTGCTTGATCCACTTCTCCCTCTTGGCCGTAGAG +
Preference number: 6 (lower is better)
Translates to: SLWITRVRGSPG*CLIHFSLLAVE
Trigger: CTCTACGGCCAAGAGGGAGAAGTGGATCAAGCACCACCCCGGGGAGCCTCTCACCCTCGTTATCCACAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000511018.1
ENST00000514990.1
CDS CCA 72 bp GCGTCTTCTGCCAGTAACGCTCAGCACGTCGGCTCTTaGTACAGAAGACGAACAGGGCCACCACGGAGAGCA +
Preference number: 6 (lower is better)
Translates to: ASSASNAQHVGS*YRRRTGPPRRA
Trigger: TGCTCTCCGTGGTGGCCCTGTTCGTCTTCTGTACCAAGAGCCGACGTGCTGAGCGTTACTGGCAGAAGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CAA 72 bp CCCTGCTTGATCTTGAGGATGTTGTCGTCGGAGGGGTaGAGGTCGAAGGTGAAGAGCTTGGCCAGGTCGCCG +
Preference number: 6 (lower is better)
Translates to: PCLILRMLSSEG*RSKVKSLARSP
Trigger: CGGCGACCTGGCCAAGCTCTTCACCTTCGACCTCAACCCCTCCGACGACAACATCCTCAAGATCAAGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CAA 72 bp CCCAGCTTGTGCTGCTCCTTGGCGCCCTGCTTGATCTaGAGGATGTTGTCGTCGGAGGGGTTGAGGTCGAAG +
Preference number: 6 (lower is better)
Translates to: PSLCCSLAPCLI*RMLSSEGLRSK
Trigger: CTTCGACCTCAACCCCTCCGACGACAACATCCTCAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CAA 72 bp ACGAAGCCCAGCTTGTGCTGCTCCTTGGCGCCCTGCTaGATCTTGAGGATGTTGTCGTCGGAGGGGTTGAGG +
Preference number: 6 (lower is better)
Translates to: TKPSLCCSLAPC*ILRMLSSEGLR
Trigger: CCTCAACCCCTCCGACGACAACATCCTCAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CAA 72 bp AGGAAGGCGCTCACGAAGCCCAGCTTGTGCTGCTCCTaGGCGCCCTGCTTGATCTTGAGGATGTTGTCGTCG +
Preference number: 6 (lower is better)
Translates to: RKALTKPSLCCS*APCLILRMLSS
Trigger: CGACGACAACATCCTCAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGAGCGCCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CAA 72 bp GCAGTCGAGGGACAGTTGTGGAGGAGAGAGCTGGCTTaGTCCCTCAAGGGCCTGAGGTTGGAGCCTTGTCAC +
Preference number: 6 (lower is better)
Translates to: AVEGQLWRRELA*SLKGLRLEPCH
Trigger: GTGACAAGGCTCCAACCTCAGGCCCTTGAGGGACAAAGCCAGCTCTCTCCTCCACAACTGTCCCTCGACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504524.5
CDS CAA 90 bp CTCACGAAGCCCAGCTTGTGCTGCTCCTTGGCGCCCTGCTTGATCTaGAGGATGTTGTCGTCGGAGGGGTTGAGGTCGAAGGTGAAGAGC +
Preference number: 6 (lower is better)
Translates to: LTKPSLCCSLAPCLI*RMLSSEGLRSKVKS
Trigger: GCTCTTCACCTTCGACCTCAACCCCTCCGACGACAACATCCTCAAGATCAAGCAGGGCGCCAAGGAGCAGCACAAGCTGGGCTTCGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS TCA 72 bp CAGCGTGTTAAGCTTCTTGCGGCCGTCTTCCACCACTaGGGTGTCGTCCAGGTCCCGAAGGATGTAGCTCTG +
Preference number: 6 (lower is better)
Translates to: QRVKLLAAVFHH*GVVQVPKDVAL
Trigger: CAGAGCTACATCCTTCGGGACCTGGACGACACCTCAGTGGTGGAAGACGGCCGCAAGAAGCTTAACACGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS TCA 72 bp AGGTGCTGCTTCTCCGAGCCTCAGTGTGCTTATCTGTaGAGTGGAGCTGATGGTGCCCACCTGAGAGGGGTG +
Preference number: 6 (lower is better)
Translates to: RCCFSEPQCAYL*SGADGAHLRGV
Trigger: CACCCCTCTCAGGTGGGCACCATCAGCTCCACTTCACAGATAAGCACACTGAGGCTCGGAGAAGCAGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512807.1
CDS CCA 72 bp GTGGGACGTCATCAGGTAAAGGTAACCGGAGTCTGCTaGGTCAAACTGCATGACATGGTGCACGGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: VGRHQVKVTGVC*VKLHDMVHGLP
Trigger: GGGGAGCCCGTGCACCATGTCATGCAGTTTGACCCAGCAGACTCCGGTTACCTTTACCTGATGACGTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000505237.2
ENST00000505665.5
CDS CCA 72 bp GTTGCAGTAGGCAATCTGGTGACCAAAGGCAGGGCCTaGGACCCGAGCCACAGTGCGGATGTTGTTCCCATA +
Preference number: 6 (lower is better)
Translates to: VAVGNLVTKGRA*DPSHSADVVPI
Trigger: TATGGGAACAACATCCGCACTGTGGCTCGGGTCCCAGGCCCTGCCTTTGGTCACCAGATTGCCTACTGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CCA 72 bp ATGTGGTGGACGGCCATGGACACATTCTGCACCATGTaGAAACGCTCACCAGCCACTGTGATGGTCCTGCCG +
Preference number: 6 (lower is better)
Translates to: MWWTAMDTFCTM*KRSPATVMVLP
Trigger: CGGCAGGACCATCACAGTGGCTGGTGAGCGTTTCCACATGGTGCAGAATGTGTCCATGGCCGTCCACCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000511018.1
CDS CCA 72 bp AGAACCTTGCAGAGCGTGGGCTCCCGGCCAATGTGGTaGACGGCCATGGACACATTCTGCACCATGTGGAAA +
Preference number: 6 (lower is better)
Translates to: RTLQSVGSRPMW*TAMDTFCTMWK
Trigger: TTTCCACATGGTGCAGAATGTGTCCATGGCCGTCCACCACATTGGCCGGGAGCCCACGCTCTGCAAGGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000511018.1
CDS CCA 72 bp CAGTGCTTACGACGGCTGCTTGTATGCCTCCTGGGATaGGGAGCTCATTACCTTCCACGGTGGATGCCTCCT +
Preference number: 6 (lower is better)
Translates to: QCLRRLLVCLLG*GAHYLPRWMPP
Trigger: AGGAGGCATCCACCGTGGAAGGTAATGAGCTCCCCATCCCAGGAGGCATACAAGCAGCCGTCGTAAGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503166.1
CDS CCA 72 bp AGCATATCCCCTGGCCACCTAACATCTTCTACCCATTaGTGCTGGAGCCAGGGCACACCTCCCCCAACCTCT +
Preference number: 6 (lower is better)
Translates to: SISPGHLTSSTH*CWSQGTPPPTS
Trigger: AGAGGTTGGGGGAGGTGTGCCCTGGCTCCAGCACCAATGGGTAGAAGATGTTAGGTGGCCAGGGGATATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514990.1
CDS CAA 72 bp TGGATAACGAGGGTGAGAGGCTCCCCGGGGTGGTGCTaGATCCACTTCTCCCTCTTGGCCGTAGAGAACTGT +
Preference number: 6 (lower is better)
Translates to: WITRVRGSPGWC*IHFSLLAVENC
Trigger: ACAGTTCTCTACGGCCAAGAGGGAGAAGTGGATCAAGCACCACCCCGGGGAGCCTCTCACCCTCGTTATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000511018.1
ENST00000514990.1
CDS TCA 72 bp GGTAAAGGTAACCGGAGTCTGCTGGGTCAAACTGCATaGCATGGTGCACGGGCTCCCCATAGGCCACAGTCA +
Preference number: 6 (lower is better)
Translates to: GKGNRSLLGQTA*HGARAPHRPQS
Trigger: TGACTGTGGCCTATGGGGAGCCCGTGCACCATGTCATGCAGTTTGACCCAGCAGACTCCGGTTACCTTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000505237.2
ENST00000505665.5
CDS GCA 72 bp CTGGTGGGACGTCATCAGGTAAAGGTAACCGGAGTCTaGTGGGTCAAACTGCATGACATGGTGCACGGGCTC +
Preference number: 6 (lower is better)
Translates to: LVGRHQVKVTGV*WVKLHDMVHGL
Trigger: GAGCCCGTGCACCATGTCATGCAGTTTGACCCAGCAGACTCCGGTTACCTTTACCTGATGACGTCCCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000505237.2
ENST00000505665.5
CDS CCA 72 bp ACAGAACAGTTCAGCGATGAGGCCCCTCAAGTCCCATaGACGAAGACGGCTTCCCGGACCCTGAAGTCCAAT +
Preference number: 6 (lower is better)
Translates to: TEQFSDEAPQVP*TKTASRTLKSN
Trigger: ATTGGACTTCAGGGTCCGGGAAGCCGTCTTCGTCCATGGGACTTGAGGGGCCTCATCGCTGAACTGTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000501038.6
CDS CAA 72 bp CTGCCTAGCCTAACAGCCAGTGCTTACGACGGCTGCTaGTATGCCTCCTGGGATGGGGAGCTCATTACCTTC +
Preference number: 6 (lower is better)
Translates to: LPSLTASAYDGC*YASWDGELITF
Trigger: GAAGGTAATGAGCTCCCCATCCCAGGAGGCATACAAGCAGCCGTCGTAAGCACTGGCTGTTAGGCTAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503166.1
CDS CAA 90 bp TCTCCTGCCCCCGCTCCTCAAACTCTGGGAAAATGCATGACGAATTaGCAGGCCAGCAAGAGGCCACAGCCACTTCTGAAATGCCCTCTG +
Preference number: 6 (lower is better)
Translates to: SPAPAPQTLGKCMTN*QASKRPQPLLKCPL
Trigger: CAGAGGGCATTTCAGAAGTGGCTGTGGCCTCTTGCTGGCCTGCAAATTCGTCATGCATTTTCCCAGAGTTTGAGGAGCGGGGGCAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000501038.6
CDS TCA 72 bp AGACAATCTGGATGTCGCAGCTTACTTGGCCTATCTTaGCCCGGTACTCGTGACTCTGGAGCCCCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: RQSGCRSLLGLS*PGTRDSGAPGC
Trigger: ACAGCCTGGGGCTCCAGAGTCACGAGTACCGGGTCAAGATAGGCCAAGTAAGCTGCGACATCCAGATTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000514990.1
CDS GCA 72 bp CGGTTCAGCTCCTTGGTGAGATCTGTCATGTCTGTCTaGAGCTCAGCGAAGCCTTTGCGGATTTCCTCTCGG +
Preference number: 6 (lower is better)
Translates to: RFSSLVRSVMSV*SSAKPLRISSR
Trigger: CCGAGAGGAAATCCGCAAAGGCTTCGCTGAGCTGCAGACAGACATGACAGATCTCACCAAGGAGCTGAACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS GCA 72 bp TTGGATCCTCTCAGTGTCCCCACATTCATGCACCCATaGCAGGTGAAAGGAGTGTTTCCCGTCAAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: LDPLSVPTFMHP*QVKGVFPVKAG
Trigger: CCCTGCCTTGACGGGAAACACTCCTTTCACCTGGCATGGGTGCATGAATGTGGGGACACTGAGAGGATCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504979.1
CDS CCA 72 bp TCGCGCACCGCAAAGTCCTTCTGCTGCTCCAGCGCGTaGACAAAGACGATGAGGAAGTGCTTGTTGTTGAGT +
Preference number: 6 (lower is better)
Translates to: SRTAKSFCCSSA*TKTMRKCLLLS
Trigger: ACTCAACAACAAGCACTTCCTCATCGTCTTTGTCCACGCGCTGGAGCAGCAGAAGGACTTTGCGGTGCGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000503166.1
ENST00000512744.5
CDS CAA 90 bp GCAGTGGATGATTCTGTCAGAGACAATCTGGATGTCGCAGCTTACTaGGCCTATCTTGACCCGGTACTCGTGACTCTGGAGCCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: AVDDSVRDNLDVAAY*AYLDPVLVTLEPQA
Trigger: AGCCTGGGGCTCCAGAGTCACGAGTACCGGGTCAAGATAGGCCAAGTAAGCTGCGACATCCAGATTGTCTCTGACAGAATCATCCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000514990.1
CDS TCA 72 bp AGCTCAGCGAAGCCTTTGCGGATTTCCTCTCGGATCTaGGATTCCATCTCCTCCATCTGCAGCAGCGTCTTC +
Preference number: 6 (lower is better)
Translates to: SSAKPLRISSRI*DSISSICSSVF
Trigger: GAAGACGCTGCTGCAGATGGAGGAGATGGAATCTCAGATCCGAGAGGAAATCCGCAAAGGCTTCGCTGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS TCA 72 bp GTGCTTATCTGTGAAGTGGAGCTGATGGTGCCCACCTaGGAGGGGTGCGGGAGAATGATAGTAAGGGCAACA +
Preference number: 6 (lower is better)
Translates to: VLICEVELMVPT*EGCGRMIVRAT
Trigger: TGTTGCCCTTACTATCATTCTCCCGCACCCCTCTCAGGTGGGCACCATCAGCTCCACTTCACAGATAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512807.1
CDS CAA 72 bp CACTGCAGGACTTGTCTCCTACAGAGTAAGAGCTTCTaGCTGAGGGGGCCTCATTGGATCCTCTCAGTGTCC +
Preference number: 6 (lower is better)
Translates to: HCRTCLLQSKSF*LRGPHWILSVS
Trigger: GGACACTGAGAGGATCCAATGAGGCCCCCTCAGCAAGAAGCTCTTACTCTGTAGGAGACAAGTCCTGCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504979.1
CDS CCA 72 bp CTACAGAGTAAGAGCTTCTTGCTGAGGGGGCCTCATTaGATCCTCTCAGTGTCCCCACATTCATGCACCCAT +
Preference number: 6 (lower is better)
Translates to: LQSKSFLLRGPH*ILSVSPHSCTH
Trigger: ATGGGTGCATGAATGTGGGGACACTGAGAGGATCCAATGAGGCCCCCTCAGCAAGAAGCTCTTACTCTGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504979.1
CDS CAA 72 bp TCCAAGTCTTTCACTCGGCCCAGTGTGTTGTCCTTCTaGTCTATGAGACTCATGGCCAGGGAGGCACCTTCA +
Preference number: 6 (lower is better)
Translates to: SKSFTRPSVLSF*SMRLMAREAPS
Trigger: TGAAGGTGCCTCCCTGGCCATGAGTCTCATAGACAAGAAGGACAACACACTGGGCCGAGTGAAAGACTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS CAA 90 bp TTGTTGTTGAGTAGTGAGGAGAACAAGCTAATTCCCTCTTCCATGTaGGGCCGGCAGCTCTCAGGAATCTTCCACTCTCCCAGCAGTGGG +
Preference number: 6 (lower is better)
Translates to: LLLSSEENKLIPSSM*GRQLSGIFHSPSSG
Trigger: CCCACTGCTGGGAGAGTGGAAGATTCCTGAGAGCTGCCGGCCCAACATGGAAGAGGGAATTAGCTTGTTCTCCTCACTACTCAACAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324093.9
CDS CAA 90 bp GTTCACTCACACTGCAGGACTTGTCTCCTACAGAGTAAGAGCTTCTaGCTGAGGGGGCCTCATTGGATCCTCTCAGTGTCCCCACATTCA +
Preference number: 6 (lower is better)
Translates to: VHSHCRTCLLQSKSF*LRGPHWILSVSPHS
Trigger: TGAATGTGGGGACACTGAGAGGATCCAATGAGGCCCCCTCAGCAAGAAGCTCTTACTCTGTAGGAGACAAGTCCTGCAGTGTGAGTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504979.1
CDS CAA 90 bp AGTAGCTCTCTATTGACTGGAGAACATGGTTCCAAATTTCTCTGCTaGAGATTCAGGGACCTGGGCGTGGGCCTAGCATATCCCCTGGCC +
Preference number: 6 (lower is better)
Translates to: SSSLLTGEHGSKFLC*RFRDLGVGLAYPLA
Trigger: GGCCAGGGGATATGCTAGGCCCACGCCCAGGTCCCTGAATCTCAAGCAGAGAAATTTGGAACCATGTTCTCCAGTCAATAGAGAGCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514990.1
CDS CAA 90 bp TGCTGCTCCAGCGCGTGGACAAAGACGATGAGGAAGTGCTTGTTGTaGAGTAGTGAGGAGAACAAGCTAATTCCCTCTTCCATGTTGGGC +
Preference number: 6 (lower is better)
Translates to: CCSSAWTKTMRKCLL*SSEENKLIPSSMLG
Trigger: GCCCAACATGGAAGAGGGAATTAGCTTGTTCTCCTCACTACTCAACAACAAGCACTTCCTCATCGTCTTTGTCCACGCGCTGGAGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000503166.1
CDS CCA 72 bp TTGACCGAGCAGTGGATGATTCTGTCAGAGACAATCTaGATGTCGCAGCTTACTTGGCCTATCTTGACCCGG +
Preference number: 6 (lower is better)
Translates to: LTEQWMILSETI*MSQLTWPILTR
Trigger: CCGGGTCAAGATAGGCCAAGTAAGCTGCGACATCCAGATTGTCTCTGACAGAATCATCCACTGCTCGGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000514990.1
CDS CAA 72 bp GATTCTGTCAGAGACAATCTGGATGTCGCAGCTTACTaGGCCTATCTTGACCCGGTACTCGTGACTCTGGAG +
Preference number: 6 (lower is better)
Translates to: DSVRDNLDVAAY*AYLDPVLVTLE
Trigger: CTCCAGAGTCACGAGTACCGGGTCAAGATAGGCCAAGTAAGCTGCGACATCCAGATTGTCTCTGACAGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000504767.5
ENST00000514990.1
CDS CAA 72 bp TTCTCTGTGTCCAAGTCTTTCACTCGGCCCAGTGTGTaGTCCTTCTTGTCTATGAGACTCATGGCCAGGGAG +
Preference number: 6 (lower is better)
Translates to: FSVSKSFTRPSV*SFLSMRLMARE
Trigger: CTCCCTGGCCATGAGTCTCATAGACAAGAAGGACAACACACTGGGCCGAGTGAAAGACTTGGACACAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000512744.5
CDS CAA 90 bp TCCTTCTGCTGCTCCAGCGCGTGGACAAAGACGATGAGGAAGTGCTaGTTGTTGAGTAGTGAGGAGAACAAGCTAATTCCCTCTTCCATG +
Preference number: 6 (lower is better)
Translates to: SFCCSSAWTKTMRKC*LLSSEENKLIPSSM
Trigger: CATGGAAGAGGGAATTAGCTTGTTCTCCTCACTACTCAACAACAAGCACTTCCTCATCGTCTTTGTCCACGCGCTGGAGCAGCAGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000503166.1
CDS CAA 90 bp TTCTGCTGCTCCAGCGCGTGGACAAAGACGATGAGGAAGTGCTTGTaGTTGAGTAGTGAGGAGAACAAGCTAATTCCCTCTTCCATGTTG +
Preference number: 6 (lower is better)
Translates to: FCCSSAWTKTMRKCL*LSSEENKLIPSSML
Trigger: CAACATGGAAGAGGGAATTAGCTTGTTCTCCTCACTACTCAACAACAAGCACTTCCTCATCGTCTTTGTCCACGCGCTGGAGCAGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324093.9
ENST00000503166.1
CDS GCA 72 bp TGCTGCTCCAGCGCGTGGACAAAGACGATGAGGAAGTaGTTGTTGTTGAGTAGTGAGGAGAACAAGCTAATT +
Preference number: 6 (lower is better)
Translates to: CCSSAWTKTMRK*LLLSSEENKLI
Trigger: AATTAGCTTGTTCTCCTCACTACTCAACAACAAGCACTTCCTCATCGTCTTTGTCCACGCGCTGGAGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000503166.1
ENST00000512744.5
CDS CAA 72 bp AGCGCGTGGACAAAGACGATGAGGAAGTGCTTGTTGTaGAGTAGTGAGGAGAACAAGCTAATTCCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: SAWTKTMRKCLL*SSEENKLIPSS
Trigger: GGAAGAGGGAATTAGCTTGTTCTCCTCACTACTCAACAACAAGCACTTCCTCATCGTCTTTGTCCACGCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000503166.1
ENST00000512744.5
CDS CAA 72 bp TCCAGCGCGTGGACAAAGACGATGAGGAAGTGCTTGTaGTTGAGTAGTGAGGAGAACAAGCTAATTCCCTCT +
Preference number: 6 (lower is better)
Translates to: SSAWTKTMRKCL*LSSEENKLIPS
Trigger: AGAGGGAATTAGCTTGTTCTCCTCACTACTCAACAACAAGCACTTCCTCATCGTCTTTGTCCACGCGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324093.9
ENST00000503166.1
ENST00000512744.5
CDS GCA 72 bp GAAGGCTTTTTGCTGTTGTCCGTAGTTCACTCACACTaGAGGACTTGTCTCCTACAGAGTAAGAGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: EGFLLLSVVHSH*RTCLLQSKSFL
Trigger: CAAGAAGCTCTTACTCTGTAGGAGACAAGTCCTGCAGTGTGAGTGAACTACGGACAACAGCAAAAAGCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504979.1
CDS CAA 90 bp TTTTTCCTGAGTAATCCTCTCTTAAGTACCTTCAGTAGCTCTCTATaGACTGGAGAACATGGTTCCAAATTTCTCTGCTTGAGATTCAGG +
Preference number: 6 (lower is better)
Translates to: FFLSNPLLSTFSSSL*TGEHGSKFLCLRFR
Trigger: CCTGAATCTCAAGCAGAGAAATTTGGAACCATGTTCTCCAGTCAATAGAGAGCTACTGAAGGTACTTAAGAGAGGATTACTCAGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514990.1
CDS CAA 72 bp AGTAATCCTCTCTTAAGTACCTTCAGTAGCTCTCTATaGACTGGAGAACATGGTTCCAAATTTCTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: SNPLLSTFSSSL*TGEHGSKFLCL
Trigger: CAAGCAGAGAAATTTGGAACCATGTTCTCCAGTCAATAGAGAGCTACTGAAGGTACTTAAGAGAGGATTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514990.1