RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PLXNB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000164050

Ensembl transcript IDs: ENST00000296440.11, ENST00000358536.8, ENST00000449094.5, ENST00000456774.5, ENST00000461261.1, ENST00000462738.1, ENST00000464294.1, ENST00000465117.5, ENST00000466353.1, ENST00000467913.1, ENST00000470525.1, ENST00000473683.1, ENST00000473996.1, ENST00000478171.1, ENST00000483676.1, ENST00000483753.1, ENST00000484485.5, ENST00000485535.5, ENST00000497627.1

Found 951 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGATGTCCTCCAGCCGCCCAGTCAGGAGCTTGGAGCCATTCAGGGTaGGACGGGTGCCCCCAGCTCTGGGGCCGCGGGCCGGGAAGATGG +
Preference number: 1 (lower is better)
Translates to: GCPPAAQSGAWSHSG*DGCPQLWGRGPGRW
Trigger: CCATCTTCCCGGCCCGCGGCCCCAGAGCTGGGGGCACCCGTCTCACCCTGAATGGCTCCAAGCTCCTGACTGGGCGGCTGGAGGACATCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CCA 90 bp GGCCCAGTCAGTGGCTCCACCGAGTGGATGAGGGGCGCTGGGCACTaGGTGGCCACAGCCTCAGCCTCACCACAGGCCTCCCGGGTCACA +
Preference number: 1 (lower is better)
Translates to: GPVSGSTEWMRGAGH*VATASASPQASRVT
Trigger: TGTGACCCGGGAGGCCTGTGGTGAGGCTGAGGCTGTGGCCACCCAGTGCCCAGCGCCCCTCATCCACTCGGTGGAGCCACTGACTGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CCA 90 bp GAAGCCTCCGCTCCGTGGCCCCAAACCACACAGCCACAGGGAGCGTaGCAGGCGTGGGGCGTGGGCTGGTCTCACACCGCAGTTGTTCTG +
Preference number: 1 (lower is better)
Translates to: EASAPWPQTTQPQGA*QAWGVGWSHTAVVL
Trigger: CAGAACAACTGCGGTGTGAGACCAGCCCACGCCCCACGCCTGCCACGCTCCCTGTGGCTGTGTGGTTTGGGGCCACGGAGCGGAGGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CCA 90 bp ATGCCGTCTCCGGGACCACGCGACGCCTCCGTCCAAGCCCCTGGCTaGGCTGCAGCATTCTCGAGACCACGGTCACCCGGATTCTTGGCG +
Preference number: 1 (lower is better)
Translates to: MPSPGPRDASVQAPG*AAAFSRPRSPGFLA
Trigger: CGCCAAGAATCCGGGTGACCGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGGCGTCGCGTGGTCCCGGAGACGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR GCA 90 bp GTCTCCGGGACCACGCGACGCCTCCGTCCAAGCCCCTGGCTGGGCTaGAGCATTCTCGAGACCACGGTCACCCGGATTCTTGGCGTCTGT +
Preference number: 1 (lower is better)
Translates to: VSGTTRRLRPSPWLG*SILETTVTRILGVC
Trigger: ACAGACGCCAAGAATCCGGGTGACCGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGGCGTCGCGTGGTCCCGGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR GCA 90 bp CGGCTCCTCAAATTGCTGGCTACTGCAGGAGGGTCCAAGGGAACATaGCGTCTCCGGGACCACGCGACGCCTCCGTCCAAGCCCCTGGCT +
Preference number: 1 (lower is better)
Translates to: RLLKLLATAGGSKGT*RLRDHATPPSKPLA
Trigger: AGCCAGGGGCTTGGACGGAGGCGTCGCGTGGTCCCGGAGACGGCATGTTCCCTTGGACCCTCCTGCAGTAGCCAGCAATTTGAGGAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR GCA 90 bp GCGCAAGTTCCCCATCTGCACCGTGAACTCAGGCAAAGAGTCAGGTaGCTCTCGGAGGGCATGGTGCCGTGGCAGGGGCTGCTCCACGGG +
Preference number: 1 (lower is better)
Translates to: AQVPHLHRELRQRVR*LSEGMVPWQGLLHG
Trigger: CCCGTGGAGCAGCCCCTGCCACGGCACCATGCCCTCCGAGAGGCACCTGACTCTTTGCCTGAGTTCACGGTGCAGATGGGGAACTTGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CCA 90 bp GAACATGCCGTCTCCGGGACCACGCGACGCCTCCGTCCAAGCCCCTaGCTGGGCTGCAGCATTCTCGAGACCACGGTCACCCGGATTCTT +
Preference number: 1 (lower is better)
Translates to: EHAVSGTTRRLRPSP*LGCSILETTVTRIL
Trigger: AAGAATCCGGGTGACCGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGGCGTCGCGTGGTCCCGGAGACGGCATGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CCA 90 bp GTCACACAACGTGGACGCTCCCCCTCACACCACACACAGCCATACTaGGGCATGGCAGTTTGGCAGCGGCTGCAGTCTCCATGTCCCACG +
Preference number: 1 (lower is better)
Translates to: VTQRGRSPSHHTQPY*GMAVWQRLQSPCPT
Trigger: CGTGGGACATGGAGACTGCAGCCGCTGCCAAACTGCCATGCCCCAGTATGGCTGTGTGTGGTGTGAGGGGGAGCGTCCACGTTGTGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CCA 90 bp AACGTGGACGCTCCCCCTCACACCACACACAGCCATACTGGGGCATaGCAGTTTGGCAGCGGCTGCAGTCTCCATGTCCCACGGAACAGT +
Preference number: 1 (lower is better)
Translates to: NVDAPPHTTHSHTGA*QFGSGCSLHVPRNS
Trigger: ACTGTTCCGTGGGACATGGAGACTGCAGCCGCTGCCAAACTGCCATGCCCCAGTATGGCTGTGTGTGGTGTGAGGGGGAGCGTCCACGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR TCA 90 bp GCAGAGGTGATGTTGGGGTCCAAGGTATACTTGAACTGTCCGCGTTaGAGCCTCCGCTCCGTGGCCCCAAACCACACAGCCACAGGGAGC +
Preference number: 1 (lower is better)
Translates to: AEVMLGSKVYLNCPR*SLRSVAPNHTATGS
Trigger: GCTCCCTGTGGCTGTGTGGTTTGGGGCCACGGAGCGGAGGCTTCAACGCGGACAGTTCAAGTATACCTTGGACCCCAACATCACCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CCA 90 bp CGCTCCCCCTCACACCACACACAGCCATACTGGGGCATGGCAGTTTaGCAGCGGCTGCAGTCTCCATGTCCCACGGAACAGTCATACAGT +
Preference number: 1 (lower is better)
Translates to: RSPSHHTQPYWGMAV*QRLQSPCPTEQSYS
Trigger: ACTGTATGACTGTTCCGTGGGACATGGAGACTGCAGCCGCTGCCAAACTGCCATGCCCCAGTATGGCTGTGTGTGGTGTGAGGGGGAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CCA 90 bp CTGGCTGGGCTGCAGCATTCTCGAGACCACGGTCACCCGGATTCTTaGCGTCTGTACCACGTCCAGATTCTGGCCACGGACGCATATCTC +
Preference number: 1 (lower is better)
Translates to: LAGLQHSRDHGHPDS*RLYHVQILATDAYL
Trigger: GAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAGACGCCAAGAATCCGGGTGACCGTGGTCTCGAGAATGCTGCAGCCCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CCA 90 bp ACCACGGTCACCCGGATTCTTGGCGTCTGTACCACGTCCAGATTCTaGCCACGGACGCATATCTCACGTCCTCCACTGAGGAAGCTCTTG +
Preference number: 1 (lower is better)
Translates to: TTVTRILGVCTTSRF*PRTHISRPPLRKLL
Trigger: CAAGAGCTTCCTCAGTGGAGGACGTGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAGACGCCAAGAATCCGGGTGACCGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR GCA 90 bp CACACCACACACAGCCATACTGGGGCATGGCAGTTTGGCAGCGGCTaGAGTCTCCATGTCCCACGGAACAGTCATACAGTACCACATGCA +
Preference number: 1 (lower is better)
Translates to: HTTHSHTGAWQFGSG*SLHVPRNSHTVPHA
Trigger: TGCATGTGGTACTGTATGACTGTTCCGTGGGACATGGAGACTGCAGCCGCTGCCAAACTGCCATGCCCCAGTATGGCTGTGTGTGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR TCA 90 bp GAGGGTCCAAGGGAACATGCCGTCTCCGGGACCACGCGACGCCTCCGTCCAAGCGCTCCACCGAGTGGATaGGGGGCGCTGGGCACTGGG +
Preference number: 2 (lower is better)
Translates to: EGPREHAVSGTTRRLRPSAPPSG*GALGTG
Trigger: CCCAGTGCCCAGCGCCCCTCATCCACTCGGTGGAGC...GCTTGGACGGAGGCGTCGCGTGGTCCCGGAGACGGCATGTTCCCTTGGACCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CCA 90 bp GAGGGTCCAAGGGAACATGCCGTCTCCGGGACCACGCGACGCCTCCGTCCAAGCGGCAGGCGTGGGGCGTaGGCTGGTCTCACACCGCAG +
Preference number: 2 (lower is better)
Translates to: EGPREHAVSGTTRRLRPSGRRGA*AGLTPQ
Trigger: CTGCGGTGTGAGACCAGCCCACGCCCCACGCCTGCC...GCTTGGACGGAGGCGTCGCGTGGTCCCGGAGACGGCATGTTCCCTTGGACCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CAA 90 bp TCTCCAACCACCACTCGGATGTCCTCCAGCCGCCCAGTCAGGAGCTaGGAGCCATTCAGGGTGAGACGGGTGCCCCCAGCTCTGGGGCCG +
Preference number: 2 (lower is better)
Translates to: SPTTTRMSSSRPVRS*EPFRVRRVPPALGP
Trigger: CGGCCCCAGAGCTGGGGGCACCCGTCTCACCCTGAATGGCTCCAAGCTCCTGACTGGGCGGCTGGAGGACATCCGAGTGGTGGTTGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CCA 90 bp ACACTCCCAGGCTTGTGCCGGAATGGCATGGTGGGGTCCTCAGGGTTGAGTGGCGGAGCGTGGCAGGCGTaGGGCGTGGGCTGGTCTCAC +
Preference number: 2 (lower is better)
Translates to: TLPGLCRNGMVGSSGLSGGAWQA*GVGWSH
Trigger: GTGAGACCAGCCCACGCCCCACGCCTGCCACGCTCC...GCCACTCAACCCTGAGGACCCCACCATGCCATTCCGGCACAAGCCTGGGAGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CAA 90 bp GCCACCGTGACCATGCCCAGCACATCCTGCACATGCTGGCCCAGGTaGGAGCCCCTGATGGTGACACGGGTGCCTCCGTCTACAGGCCCA +
Preference number: 2 (lower is better)
Translates to: ATVTMPSTSCTCWPR*EPLMVTRVPPSTGP
Trigger: TGGGCCTGTAGACGGAGGCACCCGTGTCACCATCAGGGGCTCCAACCTGGGCCAGCATGTGCAGGATGTGCTGGGCATGGTCACGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR TCA 90 bp TTCTCCCCCTCCACGGAGAACACACTCCCAGGCTTGTGCCGGAATGGCATGGTGCCCCACTGGCCCCGGTaGTGCACACGAGGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: FSPSTENTLPGLCRNGMVPHWPR*CTRGCW
Trigger: CCAGCAGCCTCGTGTGCATCACCGGGGCCAGTGGGG...CACCATGCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CCA 90 bp CAGGAGGGTCCAAGGGAACATGCCGTCTCCGGGACCACGCGACGCCTCCGTCCACTGAGCTGGTGCTGCTaGCAGGTGACATGGCACTGG +
Preference number: 2 (lower is better)
Translates to: QEGPREHAVSGTTRRLRPLSWCC*QVTWHW
Trigger: CCAGTGCCATGTCACCTGCCAGCAGCACCAGCTCAG...TGGACGGAGGCGTCGCGTGGTCCCGGAGACGGCATGTTCCCTTGGACCCTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CCA 90 bp GGCGTGGGCTGGTCTCACACCGCAGTTGTTCTGACTGCTGCTCCGGCAGCAAGTGTGGATGAGGGGCGCTaGGCACTGGGTGGCCACAGC +
Preference number: 2 (lower is better)
Translates to: GVGWSHTAVVLTAAPAASVDEGR*ALGGHS
Trigger: GCTGTGGCCACCCAGTGCCCAGCGCCCCTCATCCAC...ACTTGCTGCCGGAGCAGCAGTCAGAACAACTGCGGTGTGAGACCAGCCCACGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CCA 90 bp CGCAAGTTCCCCATCTGCACCGTGAACTCAGGCAAAGAGTCAGGTGCCTCTCGGCAGCCACAGGGAGCGTaGCAGGCGTGGGGCGTGGGC +
Preference number: 2 (lower is better)
Translates to: RKFPICTVNSGKESGASRQPQGA*QAWGVG
Trigger: GCCCACGCCCCACGCCTGCCACGCTCCCTGTGGCTG...CCGAGAGGCACCTGACTCTTTGCCTGAGTTCACGGTGCAGATGGGGAACTTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR TCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGCTACCCCATGAGCCTTaGGGCCCCGGGTCTAGGAGG +
Preference number: 2 (lower is better)
Translates to: QIALTMATYEAGQPCGSQLPHEP*GPGSRR
Trigger: CCTCCTAGACCCGGGGCCTCAAGGCTCATGGGGTAG...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
3UTR-3UTR TCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGCTGGGTACTACCCCATaGGCCTTGAGGCCCCGGGTC +
Preference number: 2 (lower is better)
Translates to: QIALTMATYEAGQPCGSQLGTTP*ALRPRV
Trigger: GACCCGGGGCCTCAAGGCTCATGGGGTAGTACCCAG...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
3UTR-3UTR TCA 90 bp GGCGTGGGCTGGTCTCACACCGCAGTTGTTCTGACTGCTGCTCCGGCAGCAAGTTGGAGCCATTCAGGGTaGGACGGGTGCCCCCAGCTC +
Preference number: 2 (lower is better)
Translates to: GVGWSHTAVVLTAAPAASWSHSG*DGCPQL
Trigger: GAGCTGGGGGCACCCGTCTCACCCTGAATGGCTCCA...ACTTGCTGCCGGAGCAGCAGTCAGAACAACTGCGGTGTGAGACCAGCCCACGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR TCA 90 bp CCAGGCTTGTGCCGGAATGGCATGGTGGGGTCCTCAGGGTTGAGTGGCTGCAGGTTGAACTGTCCGCGTTaGAGCCTCCGCTCCGTGGCC +
Preference number: 2 (lower is better)
Translates to: PGLCRNGMVGSSGLSGCRLNCPR*SLRSVA
Trigger: GGCCACGGAGCGGAGGCTTCAACGCGGACAGTTCAA...CCTGCAGCCACTCAACCCTGAGGACCCCACCATGCCATTCCGGCACAAGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR GCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGCCGAGCTTCCAGGGCTaGCCAGGCCAGGCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: QIALTMATYEAGQPCGSQPSFQG*PGQAEA
Trigger: TGCTTCAGCCTGGCCTGGGCAGCCCTGGAAGCTCGG...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
3UTR-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGGTGTCACAGGGTCGCTaGACTCGGGGAGCAGGCTGG +
Preference number: 2 (lower is better)
Translates to: QIALTMATYEAGQPCGSQVSQGR*TRGAGW
Trigger: CCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACAC...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
3UTR-3UTR CCA 90 bp GAAGCCTCCGCTCCGTGGCCCCAAACCACACAGCCACAGGGAGCGTGGCAGGCGTGCTGGCAGGTGACATaGCACTGGGTATCTGGAGGT +
Preference number: 2 (lower is better)
Translates to: EASAPWPQTTQPQGAWQACWQVT*HWVSGG
Trigger: ACCTCCAGATACCCAGTGCCATGTCACCTGCCAGCA...CGCCTGCCACGCTCCCTGTGGCTGTGTGGTTTGGGGCCACGGAGCGGAGGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR TCA 90 bp CTGCAGGAGGGTCCAAGGGAACATGCCGTCTCCGGGACCACGCGACGCCTCCGTGGCAAAGTCGTGTTCTaGGACACCACGTCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: LQEGPREHAVSGTTRRLRGKVVF*DTTSSS
Trigger: GGAAGAGGACGTGGTGTCTCAGAACACGACTTTGCC...ACGGAGGCGTCGCGTGGTCCCGGAGACGGCATGTTCCCTTGGACCCTCCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR GCA 90 bp TCCAGGTTCTCCCCCTCCACGGAGAACACACTCCCAGGCTTGTGCCGGAATGGCAGCCCCTGGCTGGGCTaGAGCATTCTCGAGACCACG +
Preference number: 2 (lower is better)
Translates to: SRFSPSTENTLPGLCRNGSPWLG*SILETT
Trigger: CGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCT...GCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAACCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CCA 90 bp CCTCCGTCCAAGCCCCTGGCTGGGCTGCAGCATTCTCGAGACCACGGTCACCCGCAGGTGACATGGCACTaGGTATCTGGAGGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: PPSKPLAGLQHSRDHGHPQVTWH*VSGGGS
Trigger: TGAGCCACCTCCAGATACCCAGTGCCATGTCACCTG...CGGGTGACCGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CCA 90 bp TCTCCAACCACCACTCGGATGTCCTCCAGCCGCCCAGTCAGGAGCTTGGAGCCACCGGGTCACACAACGTaGACGCTCCCCCTCACACCA +
Preference number: 2 (lower is better)
Translates to: SPTTTRMSSSRPVRSLEPPGHTT*TLPLTP
Trigger: TGGTGTGAGGGGGAGCGTCCACGTTGTGTGACCCGG...TGGCTCCAAGCTCCTGACTGGGCGGCTGGAGGACATCCGAGTGGTGGTTGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CCA 90 bp GGGGTCCTCAGGGTTGAGTGGCTGCAGGGTGGGGTCGGCCTCATAGGAGAAAGGGAGACCTCGTACTCCTaGGCATCCACAGCACAGGGC +
Preference number: 2 (lower is better)
Translates to: GVLRVEWLQGGVGLIGERETSYS*ASTAQG
Trigger: GCCCTGTGCTGTGGATGCCCAGGAGTACGAGGTCTC...CCTTTCTCCTATGAGGCCGACCCCACCCTGCAGCCACTCAACCCTGAGGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CAA 90 bp AGGCCTGGGAGGGCAGGTGTGCGGCACGTGATGAGCTGGGAGGAGTaGACATGGCACGGCTCCTCAAATTGCTGGCTACTGCAGGAGGGT +
Preference number: 2 (lower is better)
Translates to: RPGRAGVRHVMSWEE*TWHGSSNCWLLQEG
Trigger: ACCCTCCTGCAGTAGCCAGCAATTTGAGGAGCCGTGCCATGTCAACTCCTCCCAGCTCATCACGTGCCGCACACCTGCCCTCCCAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR GCA 90 bp ACACTCCCAGGCTTGTGCCGGAATGGCATGGTGGGGTCCTCAGGGTTGAGTGGCAGCACATCCTGCACATaGTGGCCCAGGTTGGAGCCC +
Preference number: 2 (lower is better)
Translates to: TLPGLCRNGMVGSSGLSGSTSCT*WPRLEP
Trigger: GGGCTCCAACCTGGGCCAGCATGTGCAGGATGTGCT...GCCACTCAACCCTGAGGACCCCACCATGCCATTCCGGCACAAGCCTGGGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CCA 90 bp GCAAAGTCGTGTTCTGAGACACCACGTCCTCTTCCCGGCACCTCCACCGCTGTGCTGGGTATCTGGAGGTaGCTCACACTCGACCCGGGC +
Preference number: 2 (lower is better)
Translates to: AKSCSETPRPLPGTSTAVLGIWR*LTLDPG
Trigger: GCCCGGGTCGAGTGTGAGCCACCTCCAGATACCCAG...CACAGCGGTGGAGGTGCCGGGAAGAGGACGTGGTGTCTCAGAACACGACTTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CCA 90 bp TCCAGGTTCTCCCCCTCCACGGAGAACACACTCCCAGGCTTGTGCCGGAATGGCCGCGGGCCGGGAAGATaGAATGGACCTTCGGATCCT +
Preference number: 2 (lower is better)
Translates to: SRFSPSTENTLPGLCRNGRGPGR*NGPSDP
Trigger: AGGATCCGAAGGTCCATTCCATCTTCCCGGCCCGCG...GCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAACCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR TCA 90 bp GCACGGCTCCTCAAATTGCTGGCTACTGCAGGAGGGTCCAAGGGAACATGCCGTGCACTCCAGCCACCGTaGCCATGCCCAGCACATCCT +
Preference number: 2 (lower is better)
Translates to: ARLLKLLATAGGSKGTCRALQPP*PCPAHP
Trigger: AGGATGTGCTGGGCATGGTCACGGTGGCTGGAGTGC...ACGGCATGTTCCCTTGGACCCTCCTGCAGTAGCCAGCAATTTGAGGAGCCGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR GCA 90 bp TCCAGGTTCTCCCCCTCCACGGAGAACACACTCCCAGGCTTGTGCCGGAATGGCATGCCCAGCACATCCTaGACATGCTGGCCCAGGTTG +
Preference number: 2 (lower is better)
Translates to: SRFSPSTENTLPGLCRNGMPSTS*TCWPRL
Trigger: CAACCTGGGCCAGCATGTGCAGGATGTGCTGGGCAT...GCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAACCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CCA 90 bp CAGGTGGTGCCGCGTCAGCGTCTTCACCACACAGGGGCCATCCCCTATCATAGCTACAGGCCCAGTCAGTaGCTCCACCGAGTGGATGAG +
Preference number: 2 (lower is better)
Translates to: QVVPRQRLHHTGAIPYHSYRPSQ*LHRVDE
Trigger: CTCATCCACTCGGTGGAGCCACTGACTGGGCCTGTA...GCTATGATAGGGGATGGCCCCTGTGTGGTGAAGACGCTGACGCGGCACCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CAA 90 bp ACGCTCCCCCTCACACCACACACAGCCATACTGGGGCATGGCAGTTaGGCAGCGGCTGCAGTCTCCATGTCCCACGGAACAGTCATACAG +
Preference number: 2 (lower is better)
Translates to: TLPLTPHTAILGHGS*AAAAVSMSHGTVIQ
Trigger: CTGTATGACTGTTCCGTGGGACATGGAGACTGCAGCCGCTGCCAAACTGCCATGCCCCAGTATGGCTGTGTGTGGTGTGAGGGGGAGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CAA 90 bp CCTGGCTGGGCTGCAGCATTCTCGAGACCACGGTCACCCGGATTCTaGGCGTCTGTACCACGTCCAGATTCTGGCCACGGACGCATATCT +
Preference number: 2 (lower is better)
Translates to: PGWAAAFSRPRSPGF*ASVPRPDSGHGRIS
Trigger: AGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAGACGCCAAGAATCCGGGTGACCGTGGTCTCGAGAATGCTGCAGCCCAGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR GCA 90 bp GGCGTCTGTACCACGTCCAGATTCTGGCCACGGACGCATATCTCACGTCCTCCACAGTTTGGCAGCGGCTaGAGTCTCCATGTCCCACGG +
Preference number: 2 (lower is better)
Translates to: GVCTTSRFWPRTHISRPPQFGSG*SLHVPR
Trigger: CCGTGGGACATGGAGACTGCAGCCGCTGCCAAACTG...TGGAGGACGTGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAGACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTCCCGGGTCTAGGAGGTaGATCCAGCAGGGCCGAGGC +
Preference number: 2 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSPGSRR*IQQGRG
Trigger: GCCTCGGCCCTGCTGGATCCACCTCCTAGACCCGGG...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
3UTR-3UTR CCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACCCCGGGTCTAGGAGGTaGATCCAGCAGGGCCGAGGC +
Preference number: 2 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNPGSRR*IQQGRG
Trigger: GCCTCGGCCCTGCTGGATCCACCTCCTAGACCCGGG...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
3UTR-3UTR CCA 90 bp GCACGGCTCCTCAAATTGCTGGCTACTGCAGGAGGGTCCAAGGGAACATGCCGTAGCCATACTGGGGCATaGCAGTTTGGCAGCGGCTGC +
Preference number: 2 (lower is better)
Translates to: ARLLKLLATAGGSKGTCRSHTGA*QFGSGC
Trigger: GCAGCCGCTGCCAAACTGCCATGCCCCAGTATGGCT...ACGGCATGTTCCCTTGGACCCTCCTGCAGTAGCCAGCAATTTGAGGAGCCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CAA 90 bp AGCAGAGGTGATGTTGGGGTCCAAGGTATACTTGAACTGTCCGCGTaGAAGCCTCCGCTCCGTGGCCCCAAACCACACAGCCACAGGGAG +
Preference number: 2 (lower is better)
Translates to: SRGDVGVQGILELSA*KPPLRGPKPHSHRE
Trigger: CTCCCTGTGGCTGTGTGGTTTGGGGCCACGGAGCGGAGGCTTCAACGCGGACAGTTCAAGTATACCTTGGACCCCAACATCACCTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR TCA 90 bp ACACTCCCAGGCTTGTGCCGGAATGGCATGGTGGGGTCCTCAGGGTTGAGTGGCGGTCCAAGGTATACTTaGACTGTCCGCGTTGAAGCC +
Preference number: 2 (lower is better)
Translates to: TLPGLCRNGMVGSSGLSGGPRYT*TVRVEA
Trigger: GGCTTCAACGCGGACAGTTCAAGTATACCTTGGACC...GCCACTCAACCCTGAGGACCCCACCATGCCATTCCGGCACAAGCCTGGGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CCA 90 bp GGGGTCCTCAGGGTTGAGTGGCTGCAGGGTGGGGTCGGCCTCATAGGAGAAAGGACACTCATTGTCTCCTaGGCCATCCTGGAAAAGGTG +
Preference number: 2 (lower is better)
Translates to: GVLRVEWLQGGVGLIGERTLIVS*AILEKV
Trigger: CACCTTTTCCAGGATGGCCCAGGAGACAATGAGTGT...CCTTTCTCCTATGAGGCCGACCCCACCCTGCAGCCACTCAACCCTGAGGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CCA 90 bp GCAAAGTCGTGTTCTGAGACACCACGTCCTCTTCCCGGCACCTCCACCGCTGTGATGGCACTGGGTATCTaGAGGTGGCTCACACTCGAC +
Preference number: 2 (lower is better)
Translates to: AKSCSETPRPLPGTSTAVMALGI*RWLTLD
Trigger: GTCGAGTGTGAGCCACCTCCAGATACCCAGTGCCAT...CACAGCGGTGGAGGTGCCGGGAAGAGGACGTGGTGTCTCAGAACACGACTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CCA 90 bp TCTTGGCGTCTGTACCACGTCCAGATTCTGGCCACGGACGCATATCTCACGTCCTGGGGCATGGCAGTTTaGCAGCGGCTGCAGTCTCCA +
Preference number: 2 (lower is better)
Translates to: SWRLYHVQILATDAYLTSWGMAV*QRLQSP
Trigger: TGGAGACTGCAGCCGCTGCCAAACTGCCATGCCCCA...GGACGTGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAGACGCCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CCA 90 bp GCACGTGATGAGCTGGGAGGAGTTGACATGGCACGGCTCCTCAAATTGCTGGCTTGCACACGAGGCTGCTaGAGACCTCGTACTCCTGGG +
Preference number: 2 (lower is better)
Translates to: ARDELGGVDMARLLKLLACTRGC*RPRTPG
Trigger: CCCAGGAGTACGAGGTCTCCAGCAGCCTCGTGTGCA...AGCCAGCAATTTGAGGAGCCGTGCCATGTCAACTCCTCCCAGCTCATCACGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR TCA 90 bp TCTTGGCGTCTGTACCACGTCCAGATTCTGGCCACGGACGCATATCTCACGTCCTGGGGCCAGCAGAGGTaGTGTTGGGGTCCAAGGTAT +
Preference number: 2 (lower is better)
Translates to: SWRLYHVQILATDAYLTSWGQQR*CWGPRY
Trigger: ATACCTTGGACCCCAACATCACCTCTGCTGGCCCCA...GGACGTGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAGACGCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCACTCGGGGAGCAGGCTaGGTACTACCCCATGAGCCT +
Preference number: 2 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKATRGAG*VLPHEP
Trigger: AGGCTCATGGGGTAGTACCCAGCCTGCTCCCCGAGT...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
3UTR-3UTR CCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACCTTCCAGCCACTCTCTaGAAGCCCTTAGTCCCCAAC +
Preference number: 2 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYLPATL*KPLVPN
Trigger: GTTGGGGACTAAGGGCTTCCAGAGAGTGGCTGGAAG...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
3UTR-3UTR CCA 90 bp CTGTACCACGTCCAGATTCTGGCCACGGACGCATATCTCACGTCCTCCACTGAGTCTCCTGGGCCATCCTaGAAAAGGTGCAGGTTCCTG +
Preference number: 2 (lower is better)
Translates to: LYHVQILATDAYLTSSTESPGPS*KRCRFL
Trigger: CAGGAACCTGCACCTTTTCCAGGATGGCCCAGGAGA...CTCAGTGGAGGACGTGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR GCA 90 bp GCAAAGTCAAAGACCAGGTTGTCAAGGATAAATTCCACCCGGACCCAGGGGTCCAAAGGTGCAGGTTCCTaGCTAGCAGCCGGATTTCCC +
Preference number: 2 (lower is better)
Translates to: AKSKTRLSRINSTRTQGSKGAGS*LAAGFP
Trigger: GGGAAATCCGGCTGCTAGGCAGGAACCTGCACCTTT...GGACCCCTGGGTCCGGGTGGAATTTATCCTTGACAACCTGGTCTTTGACTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR GCA 90 bp GCAAAGTCAAAGACCAGGTTGTCAAGGATAAATTCCACCCGGACCCAGGGGTCCCACGGCTCCTCAAATTaGTGGCTACTGCAGGAGGGT +
Preference number: 2 (lower is better)
Translates to: AKSKTRLSRINSTRTQGSHGSSN*WLLQEG
Trigger: ACCCTCCTGCAGTAGCCAGCAATTTGAGGAGCCGTG...GGACCCCTGGGTCCGGGTGGAATTTATCCTTGACAACCTGGTCTTTGACTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTGAGCCACCAGGAGACTaGGAGTCACCTTCCACTAAC +
Preference number: 2 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSEPPGD*ESPSTN
Trigger: GTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTC...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
3UTR CCA 72 bp CCGGGACCACGCGACGCCTCCGTCCAAGCCCCTGGCTaGGCTGCAGCATTCTCGAGACCACGGTCACCCGGA +
Preference number: 3 (lower is better)
Translates to: PGPRDASVQAPG*AAAFSRPRSPG
Trigger: TCCGGGTGACCGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGGCGTCGCGTGGTCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CCA 72 bp GTCTCCGGGACCACGCGACGCCTCCGTCCAAGCCCCTaGCTGGGCTGCAGCATTCTCGAGACCACGGTCACC +
Preference number: 3 (lower is better)
Translates to: VSGTTRRLRPSP*LGCSILETTVT
Trigger: GGTGACCGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGGCGTCGCGTGGTCCCGGAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CAA 90 bp ACTGCAGGAGGGTCCAAGGGAACATGCCGTCTCCGGGACCACGCGACGCCTCCGCTTGAACTGTCCGCGTaGAAGCCTCCGCTCCGTGGC +
Preference number: 3 (lower is better)
Translates to: TAGGSKGTCRLRDHATPPLELSA*KPPLRG
Trigger: GCCACGGAGCGGAGGCTTCAACGCGGACAGTTCAAG...CGGAGGCGTCGCGTGGTCCCGGAGACGGCATGTTCCCTTGGACCCTCCTGCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR GCA 72 bp CCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTaGCCAGGCCAGGCTGAAGCAACAGCAGGCCGTGGC +
Preference number: 3 (lower is better)
Translates to: PKKVASPPSFQG*PGQAEATAGRG
Trigger: GCCACGGCCTGCTGTTGCTTCAGCCTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
3UTR CCA 72 bp GGGTGCCCCCAGCTCTGGGGCCGCGGGCCGGGAAGATaGAATGGACCTTCGGATCCTGGTAGGCAAAGTCGT +
Preference number: 3 (lower is better)
Translates to: GCPQLWGRGPGR*NGPSDPGRQSR
Trigger: ACGACTTTGCCTACCAGGATCCGAAGGTCCATTCCATCTTCCCGGCCCGCGGCCCCAGAGCTGGGGGCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR GCA 72 bp ACCACGCGACGCCTCCGTCCAAGCCCCTGGCTGGGCTaGAGCATTCTCGAGACCACGGTCACCCGGATTCTT +
Preference number: 3 (lower is better)
Translates to: TTRRLRPSPWLG*SILETTVTRIL
Trigger: AAGAATCCGGGTGACCGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGGCGTCGCGTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR GCA 72 bp CCCCATCTGCACCGTGAACTCAGGCAAAGAGTCAGGTaGCTCTCGGAGGGCATGGTGCCGTGGCAGGGGCTG +
Preference number: 3 (lower is better)
Translates to: PHLHRELRQRVR*LSEGMVPWQGL
Trigger: CAGCCCCTGCCACGGCACCATGCCCTCCGAGAGGCACCTGACTCTTTGCCTGAGTTCACGGTGCAGATGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CCA 72 bp GCCACCGTGACCATGCCCAGCACATCCTGCACATGCTaGCCCAGGTTGGAGCCCCTGATGGTGACACGGGTG +
Preference number: 3 (lower is better)
Translates to: ATVTMPSTSCTC*PRLEPLMVTRV
Trigger: CACCCGTGTCACCATCAGGGGCTCCAACCTGGGCCAGCATGTGCAGGATGTGCTGGGCATGGTCACGGTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CAA 90 bp CTCCACCGAGTGGATGAGGGGCGCTGGGCACTGGGTGGCCACAGCCTCAGCCTCTCCATCACACACTCATaGTCTCCTGGGCCATCCTGG +
Preference number: 3 (lower is better)
Translates to: LHRVDEGRWALGGHSLSLSITHS*SPGPSW
Trigger: CCAGGATGGCCCAGGAGACAATGAGTGTGTGATGGA...GAGGCTGAGGCTGTGGCCACCCAGTGCCCAGCGCCCCTCATCCACTCGGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR-3UTR CAA 90 bp TCCAGGTTCTCCCCCTCCACGGAGAACACACTCCCAGGCTTGTGCCGGAATGGCCTGGGGCATGGCAGTTaGGCAGCGGCTGCAGTCTCC +
Preference number: 3 (lower is better)
Translates to: SRFSPSTENTLPGLCRNGLGHGS*AAAAVS
Trigger: GGAGACTGCAGCCGCTGCCAAACTGCCATGCCCCAG...GCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAACCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR TCA 72 bp CGTGGGGCGTGGGCTGGTCTCACACCGCAGTTGTTCTaGCTGCTGCTCCGGCAGCAAGTGACAAGGCTGGTC +
Preference number: 3 (lower is better)
Translates to: RGAWAGLTPQLF*LLLRQQVTRLV
Trigger: GACCAGCCTTGTCACTTGCTGCCGGAGCAGCAGTCAGAACAACTGCGGTGTGAGACCAGCCCACGCCCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CCA 72 bp CTGCTGGCAGGTGACATGGCACTGGGTATCTGGAGGTaGCTCACACTCGACCCGGGCCTCAACCACCACCTC +
Preference number: 3 (lower is better)
Translates to: LLAGDMALGIWR*LTLDPGLNHHL
Trigger: GAGGTGGTGGTTGAGGCCCGGGTCGAGTGTGAGCCACCTCCAGATACCCAGTGCCATGTCACCTGCCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CCA 72 bp CTGGTGCTGCTGGCAGGTGACATGGCACTGGGTATCTaGAGGTGGCTCACACTCGACCCGGGCCTCAACCAC +
Preference number: 3 (lower is better)
Translates to: LVLLAGDMALGI*RWLTLDPGLNH
Trigger: GTGGTTGAGGCCCGGGTCGAGTGTGAGCCACCTCCAGATACCCAGTGCCATGTCACCTGCCAGCAGCACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR GCA 72 bp AAATTGCTGGCTACTGCAGGAGGGTCCAAGGGAACATaGCGTCTCCGGGACCACGCGACGCCTCCGTCCAAG +
Preference number: 3 (lower is better)
Translates to: KLLATAGGSKGT*RLRDHATPPSK
Trigger: CTTGGACGGAGGCGTCGCGTGGTCCCGGAGACGGCATGTTCCCTTGGACCCTCCTGCAGTAGCCAGCAATTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CCA 72 bp AGGCCTGGGAGGGCAGGTGTGCGGCACGTGATGAGCTaGGAGGAGTTGACATGGCACGGCTCCTCAAATTGC +
Preference number: 3 (lower is better)
Translates to: RPGRAGVRHVMS*EELTWHGSSNC
Trigger: GCAATTTGAGGAGCCGTGCCATGTCAACTCCTCCCAGCTCATCACGTGCCGCACACCTGCCCTCCCAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CCA 72 bp CTCCACGGAGAACACACTCCCAGGCTTGTGCCGGAATaGCATGGTGGGGTCCTCAGGGTTGAGTGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: LHGEHTPRLVPE*HGGVLRVEWLQ
Trigger: CTGCAGCCACTCAACCCTGAGGACCCCACCATGCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR GCA 72 bp TGTCTCCTGGGCCATCCTGGAAAAGGTGCAGGTTCCTaGCTAGCAGCCGGATTTCCCGCTCCACATGGACCG +
Preference number: 3 (lower is better)
Translates to: CLLGHPGKGAGS*LAAGFPAPHGP
Trigger: CGGTCCATGTGGAGCGGGAAATCCGGCTGCTAGGCAGGAACCTGCACCTTTTCCAGGATGGCCCAGGAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR GCA 72 bp TTCTCCCCCTCCACGGAGAACACACTCCCAGGCTTGTaGCGGAATGGCATGGTGGGGTCCTCAGGGTTGAGT +
Preference number: 3 (lower is better)
Translates to: FSPSTENTLPGL*RNGMVGSSGLS
Trigger: ACTCAACCCTGAGGACCCCACCATGCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CCA 72 bp ACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTaGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: TLLVSHYRHLRR*PLLRASRAAQA
Trigger: GGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
3UTR TCA 72 bp ATGGACCTTCGGATCCTGGTAGGCAAAGTCGTGTTCTaGGACACCACGTCCTCTTCCCGGCACCTCCACCGC +
Preference number: 3 (lower is better)
Translates to: MDLRILVGKVVF*DTTSSSRHLHR
Trigger: GCGGTGGAGGTGCCGGGAAGAGGACGTGGTGTCTCAGAACACGACTTTGCCTACCAGGATCCGAAGGTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CCA 72 bp TCACACCACACACAGCCATACTGGGGCATGGCAGTTTaGCAGCGGCTGCAGTCTCCATGTCCCACGGAACAG +
Preference number: 3 (lower is better)
Translates to: SHHTQPYWGMAV*QRLQSPCPTEQ
Trigger: CTGTTCCGTGGGACATGGAGACTGCAGCCGCTGCCAAACTGCCATGCCCCAGTATGGCTGTGTGTGGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CCA 72 bp CTGCAGCATTCTCGAGACCACGGTCACCCGGATTCTTaGCGTCTGTACCACGTCCAGATTCTGGCCACGGAC +
Preference number: 3 (lower is better)
Translates to: LQHSRDHGHPDS*RLYHVQILATD
Trigger: GTCCGTGGCCAGAATCTGGACGTGGTACAGACGCCAAGAATCCGGGTGACCGTGGTCTCGAGAATGCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR TCA 72 bp ATGTTGGGGTCCAAGGTATACTTGAACTGTCCGCGTTaGAGCCTCCGCTCCGTGGCCCCAAACCACACAGCC +
Preference number: 3 (lower is better)
Translates to: MLGSKVYLNCPR*SLRSVAPNHTA
Trigger: GGCTGTGTGGTTTGGGGCCACGGAGCGGAGGCTTCAACGCGGACAGTTCAAGTATACCTTGGACCCCAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CCA 72 bp ACCCGGATTCTTGGCGTCTGTACCACGTCCAGATTCTaGCCACGGACGCATATCTCACGTCCTCCACTGAGG +
Preference number: 3 (lower is better)
Translates to: TRILGVCTTSRF*PRTHISRPPLR
Trigger: CCTCAGTGGAGGACGTGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAGACGCCAAGAATCCGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR GCA 72 bp CACAGCCATACTGGGGCATGGCAGTTTGGCAGCGGCTaGAGTCTCCATGTCCCACGGAACAGTCATACAGTA +
Preference number: 3 (lower is better)
Translates to: HSHTGAWQFGSG*SLHVPRNSHTV
Trigger: TACTGTATGACTGTTCCGTGGGACATGGAGACTGCAGCCGCTGCCAAACTGCCATGCCCCAGTATGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CTGCAGGAGGGTCCAAGGGAACATGCCGTCTCCGGGACCACGCGACGCCTCCGTCAGCCACAGGGAGCGTaGCAGGCGTGGGGCGTGGGC +
Preference number: 4 (lower is better)
Translates to: LQEGPREHAVSGTTRRLRQPQGA*QAWGVG
Trigger: GCCCACGCCCCACGCCTGCCACGCTCCCTGTGGCTG...ACGGAGGCGTCGCGTGGTCCCGGAGACGGCATGTTCCCTTGGACCCTCCTGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp CCTCCGTCCAAGCCCCTGGCTGGGCTGCAGCATTCTCGAGACCACGGTCACCCGCCCCACTGGCCCCGGTaGTGCACACGAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PPSKPLAGLQHSRDHGHPPHWPR*CTRGCW
Trigger: CCAGCAGCCTCGTGTGCATCACCGGGGCCAGTGGGG...CGGGTGACCGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp GAAGCCTCCGCTCCGTGGCCCCAAACCACACAGCCACAGGGAGCGTGGCAGGCGCCAGCCCCACCGTGCTaGCCGCAGGATCATTGGCAG +
Preference number: 4 (lower is better)
Translates to: EASAPWPQTTQPQGAWQAPAPPC*PQDHWQ
Trigger: CTGCCAATGATCCTGCGGTCAGCACGGTGGGGCTGG...CGCCTGCCACGCTCCCTGTGGCTGTGTGGTTTGGGGCCACGGAGCGGAGGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp CCGTCTCCGGGACCACGCGACGCCTCCGTCCAAGCCCCTGGCTGGGCTGCAGCAGCACAGTCCAGGTGCTaGGCACAGGAAGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: PSPGPRDASVQAPGWAAAAQSRC*AQEATG
Trigger: TCCTGTGGCTTCCTGTGCTCAGCACCTGGACTGTGC...TGCTGCAGCCCAGCCAGGGGCTTGGACGGAGGCGTCGCGTGGTCCCGGAGACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGGCTCCACCGAGTGGATaGGGGGCGCTGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGAPPSG*GALGTG
Trigger: CCCAGTGCCCAGCGCCCCTCATCCACTCGGTGGAGC...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CTGTCCACACGCAGACGGCCGGCCCGACGCAGAAACAGCCCCACACGGAGCTCCGTGGCAGGCAGTCCCTaGTGTCTAGCACAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LSTRRRPARRRNSPTRSSVAGSP*CLAQGR
Trigger: CCGGCCCTGTGCTAGACAGCAGGGACTGCCTGCCAC...GGAGCTCCGTGTGGGGCTGTTTCTGCGTCGGGCCGGCCGTCTGCGTGTGGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp CTCCACCGAGTGGATGAGGGGCGCTGGGCACTGGGTGGCCACAGCCTCAGCCTCGGAGAGGCGGCCCACTaGCAGCTTGGCTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LHRVDEGRWALGGHSLSLGEAAH*QLGCLL
Trigger: GAGGAGACAGCCAAGCTGGCAGTGGGCCGCCTCTCC...GAGGCTGAGGCTGTGGCCACCCAGTGCCCAGCGCCCCTCATCCACTCGGTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGCAGAGGCTCCAGATaGCCCAGCAGCCGCCGATGG +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLGRGSR*PSSRRW
Trigger: CCATCGGCGGCTGCTGGGGCATCTGGAGCCTCTGCC...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGGGCCCAGAGCAGGCATaGTCACCTGGCAGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQGPEQA*SPGRAG
Trigger: GCCGGCCCTGCCAGGTGACCATGCCTGCTCTGGGCC...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGGGACCCGGCTGGCCATaGGGCTGGGCGTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGGPGWP*GWACGL
Trigger: CAGACCACACGCCCAGCCCCATGGCCAGCCGGGTCC...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGCCAGAACCTGCCCATaGCCCCCAGGGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLARTCP*PPGAEQ
Trigger: CTGCTCAGCCCCTGGGGGCCATGGGCAGGTTCTGGC...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGTGGATGAGGGGCGCTaGGCACTGGGTGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLVDEGR*ALGGHS
Trigger: GCTGTGGCCACCCAGTGCCCAGCGCCCCTCATCCAC...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CTGCAGGAGGGTCCAAGGGAACATGCCGTCTCCGGGACCACGCGACGCCTCCGTGTGGATGAGGGGCGCTaGGCACTGGGTGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: LQEGPREHAVSGTTRRLRVDEGR*ALGGHS
Trigger: GCTGTGGCCACCCAGTGCCCAGCGCCCCTCATCCAC...ACGGAGGCGTCGCGTGGTCCCGGAGACGGCATGTTCCCTTGGACCCTCCTGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGTGCCCCTCCGAGGCCTaGGCGGCTCCGGCTCATCAC +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGCPSEA*AAPAHH
Trigger: GTGATGAGCCGGAGCCGCCCAGGCCTCGGAGGGGCA...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGACACCCAGGTCCCGGTaGAAGGGCGACTCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGTPRSR*KGDSRC
Trigger: GCACCGCGAGTCGCCCTTGCACCGGGACCTGGGTGT...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGGCCTCCCGGGTCACACAACGTGGACGCTCCCCCTCACACCACACACAGCCAGGCCGGTGGACACTGTaGCCTCCAGCTGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QASRVTQRGRSPSHHTQPGRWTL*PPAAAQ
Trigger: CTGGGCTGCAGCTGGAGGCCACAGTGTCCACCGGCC...TGGCTGTGTGTGGTGTGAGGGGGAGCGTCCACGTTGTGTGACCCGGGAGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CAGGCCTCCCGGGTCACACAACGTGGACGCTCCCCCTCACACCACACACAGCCAGGCTGGCCATGGGGCTaGGCGTGTGGTCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: QASRVTQRGRSPSHHTQPGWPWG*ACGLSH
Trigger: GTGGCTCAGACCACACGCCCAGCCCCATGGCCAGCC...TGGCTGTGTGTGGTGTGAGGGGGAGCGTCCACGTTGTGTGACCCGGGAGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp GGCCGGCCCGACGCAGAAACAGCCCCACACGGAGCTCCGGCTGCAGAGCCTCATTCCTCTCGGCAGCACTaGGGCCTCACTAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GRPDAETAPHGAPAAEPHSSRQH*GLTRVW
Trigger: CCAGACCCTAGTGAGGCCCCAGTGCTGCCGAGAGGA...ATGAGGCTCTGCAGCCGGAGCTCCGTGTGGGGCTGTTTCTGCGTCGGGCCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGGTGGATGAGGGGCGCTaGGCACTGGGTGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGVDEGR*ALGGHS
Trigger: GCTGTGGCCACCCAGTGCCCAGCGCCCCTCATCCAC...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTACCAGCCCCACCGTGCTaGCCGCAGGATCATTGGCAG +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVPAPPC*PQDHWQ
Trigger: CTGCCAATGATCCTGCGGTCAGCACGGTGGGGCTGG...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGACAGGGCCCGGGTTGTaGTGGGTGGAATGCCACCCC +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQTGPGL*WVECHP
Trigger: GGGGTGGCATTCCACCCATCACAACCCGGGCCCTGT...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CTCCACCGAGTGGATGAGGGGCGCTGGGCACTGGGTGGCCACAGCCTCAGCCTCATCAACGTGGAGCCCTaGACGCTCTCCACACAGGGG +
Preference number: 4 (lower is better)
Translates to: LHRVDEGRWALGGHSLSLINVEP*TLSTQG
Trigger: CCCCTGTGTGGAGAGCGTTCAGGGCTCCACGTTGAT...GAGGCTGAGGCTGTGGCCACCCAGTGCCCAGCGCCCCTCATCCACTCGGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGGCTCCACCGAGTGGATaGGGGGCGCTGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQAPPSG*GALGTG
Trigger: CCCAGTGCCCAGCGCCCCTCATCCACTCGGTGGAGC...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGCCCCACTGGCCCCGGTaGTGCACACGAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQPHWPR*CTRGCW
Trigger: CCAGCAGCCTCGTGTGCATCACCGGGGCCAGTGGGG...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGCCTCGTCAGAAAGAATaGGGTGCCCGGCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLPRQKE*GARPPQ
Trigger: CTGGGGTGGCCGGGCACCTCATTCTTTCTGACGAGG...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGCGGGGCGGCTGGTGCTaGGAATCACCTGGAACAGGT +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLRGGWC*ESPGTG
Trigger: ACCTGTTCCAGGTGATTCTCAGCACCAGCCGCCCCG...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGCTGGGTACTACCCCATaGGCCTTGAGGCCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGLGTTP*ALRPRV
Trigger: GACCCGGGGCCTCAAGGCTCATGGGGTAGTACCCAG...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGCTGCTCGAGCTaGCCCAGGCGCCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGSSCSS*PRRRCS
Trigger: TGAACAGCGGCGCCTGGGGCAGCTCGAGCAGCTGCT...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CAGGAGGGTCCAAGGGAACATGCCGTCTCCGGGACCACGCGACGCCTCCGTCCAGGCGCTGGCCCCACGTaGAAAGGCACTCACGAAGTG +
Preference number: 4 (lower is better)
Translates to: QEGPREHAVSGTTRRLRPGAGPT*KGTHEV
Trigger: CACTTCGTGAGTGCCTTTGCACGTGGGGCCAGCGCC...TGGACGGAGGCGTCGCGTGGTCCCGGAGACGGCATGTTCCCTTGGACCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp GGACCACGCGACGCCTCCGTCCAAGCCCCTGGCTGGGCTGCAGCATTCTCGAGAAGCCCCTGGCTGGGCTaGAGCATTCTCGAGACCACG +
Preference number: 4 (lower is better)
Translates to: GPRDASVQAPGWAAAFSRSPWLG*SILETT
Trigger: CGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCT...TCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGGCGTCGCGTGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGGGGTCCAAGGGAACATaGCGTCTCCGGGACCACGCG +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQGSKGT*RLRDHA
Trigger: CGCGTGGTCCCGGAGACGGCATGTTCCCTTGGACCC...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp GTCTCCAACCACCACTCGGATGTCCTCCAGCCGCCCAGTCAGGAGCTTGGAGCCTCTCGGAGGGCATGGTaGCGTGGCAGGGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VSNHHSDVLQPPSQELGASRRAW*RGRGCS
Trigger: GGAGCAGCCCCTGCCACGGCACCATGCCCTCCGAGA...GGCTCCAAGCTCCTGACTGGGCGGCTGGAGGACATCCGAGTGGTGGTTGGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGCCGAGCTTCCAGGGCTaGCCAGGCCAGGCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQPSFQG*PGQAEA
Trigger: TGCTTCAGCCTGGCCTGGGCAGCCCTGGAAGCTCGG...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGAGAGGGTGCCTGAGGTaGGGTCCCTTGCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLRGCLR*GPLPGA
Trigger: AGCACCTGGCAAGGGACCCCACCTCAGGCACCCTCT...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CTGCAGGAGGGTCCAAGGGAACATGCCGTCTCCGGGACCACGCGACGCCTCCGTCTAGCACAGGGCCGGTaGACACTGTGGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LQEGPREHAVSGTTRRLRLAQGR*TLWPPA
Trigger: AGCTGGAGGCCACAGTGTCCACCGGCCCTGTGCTAG...ACGGAGGCGTCGCGTGGTCCCGGAGACGGCATGTTCCCTTGGACCCTCCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCGTCTCCGGGACCACGCGACGCCTCCGTCCAAGCCCCTGGCTGGGCTGCAGCAATCCAGGGTGTCCACTaGCAGCTGTGCACAGTCAGA +
Preference number: 4 (lower is better)
Translates to: PSPGPRDASVQAPGWAAAIQGVH*QLCTVR
Trigger: TCTGACTGTGCACAGCTGCCAGTGGACACCCTGGAT...TGCTGCAGCCCAGCCAGGGGCTTGGACGGAGGCGTCGCGTGGTCCCGGAGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp GTGATGCACACGAGGCTGCTGGAGACCTCGTACTCCTGGGCATCCACAGCACAGCCAGCGGGACCCGGCTaGCCATGGGGCTGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: VMHTRLLETSYSWASTAQPAGPG*PWGWAC
Trigger: ACACGCCCAGCCCCATGGCCAGCCGGGTCCCGCTGG...CTGTGCTGTGGATGCCCAGGAGTACGAGGTCTCCAGCAGCCTCGTGTGCATCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCTCCGTCCAAGCCCCTGGCTGGGCTGCAGCATTCTCGAGACCACGGTCACCCGTGTGTGGAGTATGGGTaGCCATCGCTCCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: PPSKPLAGLQHSRDHGHPCVEYG*PSLPGP
Trigger: GGGCCCAGGGAGCGATGGCCACCCATACTCCACACA...CGGGTGACCGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCTCCGTCCAAGCCCCTGGCTGGGCTGCAGCATTCTCGAGACCACGGTCACCCGGGCCTCACTAGGGTCTaGGGAGGGGCACATCACACC +
Preference number: 4 (lower is better)
Translates to: PPSKPLAGLQHSRDHGHPGLTRV*GGAHHT
Trigger: GGTGTGATGTGCCCCTCCCCAGACCCTAGTGAGGCC...CGGGTGACCGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTACCGAAGCTGTGGCTGTaGAGGGAGCCCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVPKLWL*REPQAP
Trigger: TGGAGCCTGGGGCTCCCTCCACAGCCACAGCTTCGG...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTAGGTCCAGGGGCACTGTaGGATGAAGAGCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVGPGAL*DEEPRG
Trigger: GCCCCGAGGCTCTTCATCCCACAGTGCCCCTGGACC...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTCCGTCCAAGCCCCTGGCTGGGCTGCAGCATTCTCGAGACCACGGTCACCCGCTGGGTATCTGGAGGTaGCTCACACTCGACCCGGGC +
Preference number: 4 (lower is better)
Translates to: PPSKPLAGLQHSRDHGHPLGIWR*LTLDPG
Trigger: GCCCGGGTCGAGTGTGAGCCACCTCCAGATACCCAG...CGGGTGACCGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGCCGGGTCACACAACGTaGACGCTCCCCCTCACACCA +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLPGHTT*TLPLTP
Trigger: TGGTGTGAGGGGGAGCGTCCACGTTGTGTGACCCGG...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp ACCACCACTCGGATGTCCTCCAGCCGCCCAGTCAGGAGCTTGGAGCCATTCAGGAGGGGCGCTGGGCACTaGGTGGCCACAGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TTTRMSSSRPVRSLEPFRRGAGH*VATASA
Trigger: GGCTGAGGCTGTGGCCACCCAGTGCCCAGCGCCCCT...CCTGAATGGCTCCAAGCTCCTGACTGGGCGGCTGGAGGACATCCGAGTGGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGCGTGGGGCGTGGGCTaGTCTCACACCGCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLAWGVG*SHTAVV
Trigger: AACAACTGCGGTGTGAGACCAGCCCACGCCCCACGC...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CTGCAGGAGGGTCCAAGGGAACATGCCGTCTCCGGGACCACGCGACGCCTCCGTGAAGCCTCCGCTCCGTaGCCCCAAACCACACAGCCA +
Preference number: 4 (lower is better)
Translates to: LQEGPREHAVSGTTRRLREASAP*PQTTQP
Trigger: TGGCTGTGTGGTTTGGGGCCACGGAGCGGAGGCTTC...ACGGAGGCGTCGCGTGGTCCCGGAGACGGCATGTTCCCTTGGACCCTCCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGGAGGGCATGGTGCCGTaGCAGGGGCTGCTCCACGGG +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQEGMVP*QGLLHG
Trigger: CCCGTGGAGCAGCCCCTGCCACGGCACCATGCCCTC...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GGCGTGGGCTGGTCTCACACCGCAGTTGTTCTGACTGCTGCTCCGGCAGCAAGTGAGGGCATGGTGCCGTaGCAGGGGCTGCTCCACGGG +
Preference number: 4 (lower is better)
Translates to: GVGWSHTAVVLTAAPAASEGMVP*QGLLHG
Trigger: CCCGTGGAGCAGCCCCTGCCACGGCACCATGCCCTC...ACTTGCTGCCGGAGCAGCAGTCAGAACAACTGCGGTGTGAGACCAGCCCACGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGCCCTTGCTCCACAGTaGGCCGTCTGCTCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLALAPQ*AVCSQA
Trigger: TGCCTGAGAGCAGACGGCCCACTGTGGAGCAAGGGC...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAAGGGTGCGAGGGTCTaGCCGCTGGGTGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGKGARV*PLGERH
Trigger: GTGCCTCTCACCCAGCGGCCAGACCCTCGCACCCTT...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGTGCCCCTCCGAGGCCTaGGCGGCTCCGGCTCATCAC +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQCPSEA*AAPAHH
Trigger: GTGATGAGCCGGAGCCGCCCAGGCCTCGGAGGGGCA...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTAGTGTGGCTGAGGGTCTaGAGTCAGTGGGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVVWLRV*SQWGQG
Trigger: TCCCTGCCCCCACTGACTTCAGACCCTCAGCCACAC...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGATCAACGTGGAGCCCTaGACGCTCTCCACACAGGGG +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLINVEP*TLSTQG
Trigger: CCCCTGTGTGGAGAGCGTTCAGGGCTCCACGTTGAT...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp GAAGCCTCCGCTCCGTGGCCCCAAACCACACAGCCACAGGGAGCGTGGCAGGCGACACCGCAGTTGTTCTaGCTGCTGCTCCGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: EASAPWPQTTQPQGAWQATPQLF*LLLRQQ
Trigger: TTGCTGCCGGAGCAGCAGTCAGAACAACTGCGGTGT...CGCCTGCCACGCTCCCTGTGGCTGTGTGGTTTGGGGCCACGGAGCGGAGGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGTTGAACTGTCCGCGTTaGAGCCTCCGCTCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQLNCPR*SLRSVA
Trigger: GGCCACGGAGCGGAGGCTTCAACGCGGACAGTTCAA...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGTTGAACTGTCCGCGTTaGAGCCTCCGCTCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGLNCPR*SLRSVA
Trigger: GGCCACGGAGCGGAGGCTTCAACGCGGACAGTTCAA...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp GGACCACGCGACGCCTCCGTCCAAGCCCCTGGCTGGGCTGCAGCATTCTCGAGACCGTCATACTGCACGTaGCCCAGGGAGAAGCGCAAG +
Preference number: 4 (lower is better)
Translates to: GPRDASVQAPGWAAAFSRPSYCT*PREKRK
Trigger: CTTGCGCTTCTCCCTGGGTCACGTGCAGTATGACGG...TCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGGCGTCGCGTGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp AGCGTGGCAGGCGTGGGGCGTGGGCTGGTCTCACACCGCAGTTGTTCTGACTGCTCACAGACCCCCTGGTaGACGCTCCCGCATACCACC +
Preference number: 4 (lower is better)
Translates to: SVAGVGRGLVSHRSCSDCSQTPW*TLPHTT
Trigger: GGTGGTATGCGGGAGCGTGCACCAGGGGGTCTGTGA...GCAGTCAGAACAACTGCGGTGTGAGACCAGCCCACGCCCCACGCCTGCCACGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTAGGCGCTGGCCCCACGTaGAAAGGCACTCACGAAGTG +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVGAGPT*KGTHEV
Trigger: CACTTCGTGAGTGCCTTTGCACGTGGGGCCAGCGCC...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp ACACTCCCAGGCTTGTGCCGGAATGGCATGGTGGGGTCCTCAGGGTTGAGTGGCGGCAGAGGCTCCAGATaGCCCAGCAGCCGCCGATGG +
Preference number: 4 (lower is better)
Translates to: TLPGLCRNGMVGSSGLSGGRGSR*PSSRRW
Trigger: CCATCGGCGGCTGCTGGGGCATCTGGAGCCTCTGCC...GCCACTCAACCCTGAGGACCCCACCATGCCATTCCGGCACAAGCCTGGGAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp GGCCGGCCCGACGCAGAAACAGCCCCACACGGAGCTCCGGCTGCAGAGCCTCATCTCACTGCAGACCCCTaGTGGATGCTCTGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: GRPDAETAPHGAPAAEPHLTADP*WMLCVE
Trigger: CTCCACACAGAGCATCCAGCAGGGGTCTGCAGTGAG...ATGAGGCTCTGCAGCCGGAGCTCCGTGTGGGGCTGTTTCTGCGTCGGGCCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp AGCGTGGCAGGCGTGGGGCGTGGGCTGGTCTCACACCGCAGTTGTTCTGACTGCAACGGCGACTGCACCTaGCAAGGAGCACGCACCACC +
Preference number: 4 (lower is better)
Translates to: SVAGVGRGLVSHRSCSDCNGDCT*QGARTT
Trigger: GGTGGTGCGTGCTCCTTGGCAGGTGCAGTCGCCGTT...GCAGTCAGAACAACTGCGGTGTGAGACCAGCCCACGCCCCACGCCTGCCACGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGACTCAGAACGGCGACTaGACCTGCCAAGGAGCACGC +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLTQNGD*TCQGAR
Trigger: GCGTGCTCCTTGGCAGGTGCAGTCGCCGTTCTGAGT...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTAAAGCTCCATAGCCACTaGTCTGGGCCCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVKLHSH*SGPWPL
Trigger: GAGGGGCCAGGGCCCAGAGCAGTGGCTATGGAGCTT...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGACGAGGCCTTGTGGGTaGACAGGTGCTGCCAGACAC +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLTRPCG*TGAARH
Trigger: GTGTCTGGCAGCACCTGTGCACCCACAAGGCCTCGT...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTATATGGAGCCAGAACCTaGCCATGGCCCCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVYGART*PWPPGA
Trigger: AGCCCCTGGGGGCCATGGGCAGGTTCTGGCTCCATA...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGCAGTTTGGCAGCGGCTaGAGTCTCCATGTCCCACGG +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLQFGSG*SLHVPR
Trigger: CCGTGGGACATGGAGACTGCAGCCGCTGCCAAACTG...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTAAGCCCCTGGCTGGGCTaGAGCATTCTCGAGACCACG +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVSPWLG*SILETT
Trigger: CGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCT...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCACACGCAGACGGCCGGCCCGACGCAGAAACAGCCCCACACGGAGCTCCGGCTCTCCTCCTTGGACATTaGAAGGTCCAGGTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PHADGRPDAETAPHGAPALLLGH*KVQVLP
Trigger: GGGGAGAACCTGGACCTTGCAATGTCCAAGGAGGAG...AGCCGGAGCTCCGTGTGGGGCTGTTTCTGCGTCGGGCCGGCCGTCTGCGTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGGGCCGGTGGACACTGTaGCCTCCAGCTGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQGRWTL*PPAAAQ
Trigger: CTGGGCTGCAGCTGGAGGCCACAGTGTCCACCGGCC...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GGACCACGCGACGCCTCCGTCCAAGCCCCTGGCTGGGCTGCAGCATTCTCGAGAGGGTTGTTGGTAGGCTaGGCCTGGGGGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: GPRDASVQAPGWAAAFSRGLLVG*AWGHSS
Trigger: TGATGAGTGCCCCCAGGCCCAGCCTACCAACAACCC...TCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGGCGTCGCGTGGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp GGGGTCCTCAGGGTTGAGTGGCTGCAGGGTGGGGTCGGCCTCATAGGAGAAAGGCCACCTCCCTGGACGTaGCCACAGCTGCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GVLRVEWLQGGVGLIGERPPPWT*PQLQPG
Trigger: TCCAGGCTGCAGCTGTGGCCACGTCCAGGGAGGTGG...CCTTTCTCCTATGAGGCCGACCCCACCCTGCAGCCACTCAACCCTGAGGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGACTCCAGAATTGGTGTaGCTTCCAGCGGGACCCGGC +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLTPELV*LPAGPG
Trigger: GCCGGGTCCCGCTGGAAGCCACACCAATTCTGGAGT...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGGTGGCCATCGCTCCCTaGGCCCAAGTAGACCCTGTG +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGVAIAP*AQVDPV
Trigger: CACAGGGTCTACTTGGGCCCAGGGAGCGATGGCCAC...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGCACTGCTCTGGGCCCTaGCCCCTCGAGCACTCAGAA +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQHCSGP*PLEHSE
Trigger: TTCTGAGTGCTCGAGGGGCCAGGGCCCAGAGCAGTG...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGGGCCTCACTAGGGTCTaGGGAGGGGCACATCACACC +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQGLTRV*GGAHHT
Trigger: GGTGTGATGTGCCCCTCCCCAGACCCTAGTGAGGCC...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGTGGCCCCTGGGAAAGTaGTGGCAGGAACAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLWPLGK*WQEQWQ
Trigger: CTGCCACTGTTCCTGCCACCACTTTCCCAGGGGCCA...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GAGGGTCCAAGGGAACATGCCGTCTCCGGGACCACGCGACGCCTCCGTCCAAGCTGGGGCATGGCAGTTTaGCAGCGGCTGCAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: EGPREHAVSGTTRRLRPSWGMAV*QRLQSP
Trigger: TGGAGACTGCAGCCGCTGCCAAACTGCCATGCCCCA...GCTTGGACGGAGGCGTCGCGTGGTCCCGGAGACGGCATGTTCCCTTGGACCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGGCGTGGGGCGTGGGCTaGTCTCACACCGCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQAWGVG*SHTAVV
Trigger: AACAACTGCGGTGTGAGACCAGCCCACGCCCCACGC...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGAGCGTGGCAGGCGTaGGGCGTGGGCTGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPGAWQA*GVGWSH
Trigger: GTGAGACCAGCCCACGCCCCACGCCTGCCACGCTCC...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GCAAAGTCGTGTTCTGAGACACCACGTCCTCTTCCCGGCACCTCCACCGCTGTGGGAGCGTGGCAGGCGTaGGGCGTGGGCTGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: AKSCSETPRPLPGTSTAVGAWQA*GVGWSH
Trigger: GTGAGACCAGCCCACGCCCCACGCCTGCCACGCTCC...CACAGCGGTGGAGGTGCCGGGAAGAGGACGTGGTGTCTCAGAACACGACTTTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTAGAAGCCTCCGCTCCGTaGCCCCAAACCACACAGCCA +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVEASAP*PQTTQP
Trigger: TGGCTGTGTGGTTTGGGGCCACGGAGCGGAGGCTTC...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GAGGGTCCAAGGGAACATGCCGTCTCCGGGACCACGCGACGCCTCCGTCCAAGCAGGCTTGTGCCGGAATaGCATGGTGGGGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: EGPREHAVSGTTRRLRPSRLVPE*HGGVLR
Trigger: CCTGAGGACCCCACCATGCCATTCCGGCACAAGCCT...GCTTGGACGGAGGCGTCGCGTGGTCCCGGAGACGGCATGTTCCCTTGGACCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGCCCGGGTCTAGGAGGTaGATCCAGCAGGGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQPGSRR*IQQGRG
Trigger: GCCTCGGCCCTGCTGGATCCACCTCCTAGACCCGGG...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
3UTR CAA 72 bp ACCACTCGGATGTCCTCCAGCCGCCCAGTCAGGAGCTaGGAGCCATTCAGGGTGAGACGGGTGCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TTRMSSSRPVRS*EPFRVRRVPPA
Trigger: AGCTGGGGGCACCCGTCTCACCCTGAATGGCTCCAAGCTCCTGACTGGGCGGCTGGAGGACATCCGAGTGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp GGCCGGCCCGACGCAGAAACAGCCCCACACGGAGCTCCGGCTGCAGAGCCTCATACGTGCCATTGGGAGTaGATGCAGTTGGTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GRPDAETAPHGAPAAEPHTCHWE*MQLVEG
Trigger: CCCTTCCACCAACTGCATTCACTCCCAATGGCACGT...ATGAGGCTCTGCAGCCGGAGCTCCGTGTGGGGCTGTTTCTGCGTCGGGCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp GGCGTGGGCTGGTCTCACACCGCAGTTGTTCTGACTGCTGCTCCGGCAGCAAGTCAGGTAGAGGGTGCCTaGGGTGGGGTCCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: GVGWSHTAVVLTAAPAASQVEGA*GGVPCQ
Trigger: CTGGCAAGGGACCCCACCTCAGGCACCCTCTACCTG...ACTTGCTGCCGGAGCAGCAGTCAGAACAACTGCGGTGTGAGACCAGCCCACGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp GAAGCCTCCGCTCCGTGGCCCCAAACCACACAGCCACAGGGAGCGTGGCAGGCGCAGTATGGGTCCCTGTaGGCAAGGCAAGATGCACAG +
Preference number: 4 (lower is better)
Translates to: EASAPWPQTTQPQGAWQAQYGSL*ARQDAQ
Trigger: CTGTGCATCTTGCCTTGCTCACAGGGACCCATACTG...CGCCTGCCACGCTCCCTGTGGCTGTGTGGTTTGGGGCCACGGAGCGGAGGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp GGACCACGCGACGCCTCCGTCCAAGCCCCTGGCTGGGCTGCAGCATTCTCGAGAAGCAGGGCAGGACTCTaGTGTTCCCCAAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GPRDASVQAPGWAAAFSRSRAGL*CSPKWQ
Trigger: CTGCCACTTTGGGGAACATCAGAGTCCTGCCCTGCT...TCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGGCGTCGCGTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTAAGGACTAGCCCCAGGTaGGATGTCCGAAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVRTSPR*DVRSCG
Trigger: GCCACAGCTTCGGACATCTCACCTGGGGCTAGTCCT...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGTGCTCCGGCAGCAAGTaGCAAGGCTGGTCTCCAACC +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQCSGSK*QGWSPT
Trigger: GGTTGGAGACCAGCCTTGTCACTTGCTGCCGGAGCA...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGTGGGGCCAGCAGAGGTaGTGTTGGGGTCCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLWGQQR*CWGPRY
Trigger: ATACCTTGGACCCCAACATCACCTCTGCTGGCCCCA...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp ACACTCCCAGGCTTGTGCCGGAATGGCATGGTGGGGTCCTCAGGGTTGAGTGGCAGCAGCTGCTCGAGCTaGCCCAGGCGCCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: TLPGLCRNGMVGSSGLSGSSCSS*PRRRCS
Trigger: TGAACAGCGGCGCCTGGGGCAGCTCGAGCAGCTGCT...GCCACTCAACCCTGAGGACCCCACCATGCCATTCCGGCACAAGCCTGGGAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGGGCAGGACTCATGGCTaGCACTTGCAGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQGRTHG*HLQTAQ
Trigger: CTGGGCTGTCTGCAAGTGGCAGCCATGAGTCCTGCC...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGACACAGGCCTGGCACTaGGCAGATGGGCGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQTQAWH*ADGRSS
Trigger: TGAACTCCGCCCATCTGCGCAGTGCCAGGCCTGTGT...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGACGAGGCCTTGTGGGTaGACAGGTGCTGCCAGACAC +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGTRPCG*TGAARH
Trigger: GTGTCTGGCAGCACCTGTGCACCCACAAGGCCTCGT...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCACATCCTGCACATaGTGGCCCAGGTTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGSTSCT*WPRLEP
Trigger: GGGCTCCAACCTGGGCCAGCATGTGCAGGATGTGCT...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTAAGCACATCCTGCACATaGTGGCCCAGGTTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVSTSCT*WPRLEP
Trigger: GGGCTCCAACCTGGGCCAGCATGTGCAGGATGTGCT...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGGGGTCCAAGGGAACATaGCGTCTCCGGGACCACGCG +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQGSKGT*RLRDHA
Trigger: CGCGTGGTCCCGGAGACGGCATGTTCCCTTGGACCC...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGACTCAACATCAAGGGTaGGAGGGTCTGGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQTQHQG*EGLAAG
Trigger: CCCAGCGGCCAGACCCTCGCACCCTTGATGTTGAGT...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGTCAGAAAGAATGAGGTaGCCGGCCACCCCAGACCGC +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGSERMR*PATPDR
Trigger: GCGGTCTGGGGTGGCCGGGCACCTCATTCTTTCTGA...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGTGGTCGGAGATGCCATaGTGCTGGGCCTGCTCATCC +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGWSEMP*CWACSS
Trigger: GGATGAGCAGGCCCAGCAGCATGGCATCTCCGACCA...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTATGTCCTGGTCGGAGATaGCATGCTGCTGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVCPGRR*HAAGPA
Trigger: AGCAGGCCCAGCAGCATGGCATCTCCGACCAGGACA...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGGAGTGAATGCAGTTaGTGGAAGGGGCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLGSECS*WKGLEG
Trigger: ACCCTCCAGCCCCTTCCACCAACTGCATTCACTCCC...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTAGGGTTGTTGGTAGGCTaGGCCTGGGGGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVGLLVG*AWGHSS
Trigger: TGATGAGTGCCCCCAGGCCCAGCCTACCAACAACCC...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGTGTTCACAGACCCCCTaGTGCACGCTCCCGCATACC +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGCSQTP*CTLPHT
Trigger: GGTATGCGGGAGCGTGCACCAGGGGGTCTGTGAACA...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTCCGTCCAAGCCCCTGGCTGGGCTGCAGCATTCTCGAGACCACGGTCACCCGGGCCCACTGCCAGCTTaGCTGTCTCCTCATAGGAGA +
Preference number: 4 (lower is better)
Translates to: PPSKPLAGLQHSRDHGHPGPLPA*LSPHRR
Trigger: TCTCCTATGAGGAGACAGCCAAGCTGGCAGTGGGCC...CGGGTGACCGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGGCACTCACGAAGTGGTaGCTGTACTCGGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQALTKW*LYSERR
Trigger: CCGCCTCTCCGAGTACAGCCACCACTTCGTGAGTGC...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTCCAGCGGGACCCGGCTaGCCATGGGGCTGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSPAGPG*PWGWAC
Trigger: ACACGCCCAGCCCCATGGCCAGCCGGGTCCCGCTGG...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGCACCACCCACAGTATaGGTCCCTGTGAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLAPPTV*VPVSKA
Trigger: TGCCTTGCTCACAGGGACCCATACTGTGGGTGGTGC...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGTCTTGCAGGAGGGTCTaGGGAGACAAGCGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQSCRRV*GDKRAL
Trigger: CAGAGCCCGCTTGTCTCCCCAGACCCTCCTGCAAGA...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTATCTTGCAGGAGGGTCTaGGGAGACAAGCGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVSCRRV*GDKRAL
Trigger: CAGAGCCCGCTTGTCTCCCCAGACCCTCCTGCAAGA...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGAGATGTCCGAAGCTGTaGCTGTGGAGGGAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQRCPKL*LWREPQ
Trigger: CTGGGGCTCCCTCCACAGCCACAGCTTCGGACATCT...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGATGTCCGAAGCTGTaGCTGTGGAGGGAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGRCPKL*LWREPQ
Trigger: CTGGGGCTCCCTCCACAGCCACAGCTTCGGACATCT...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGAGGAGGGTGGAAGTaGAGAAGGCGGGTGCGTCAC +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGRGGWK*RRRVRH
Trigger: GTGACGCACCCGCCTTCTCCACTTCCACCCTCCTCT...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTATGGGGCATGGCAGTTTaGCAGCGGCTGCAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVWGMAV*QRLQSP
Trigger: TGGAGACTGCAGCCGCTGCCAAACTGCCATGCCCCA...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GGACCACGCGACGCCTCCGTCCAAGCCCCTGGCTGGGCTGCAGCATTCTCGAGATACAGGCCCAGTCAGTaGCTCCACCGAGTGGATGAG +
Preference number: 4 (lower is better)
Translates to: GPRDASVQAPGWAAAFSRYRPSQ*LHRVDE
Trigger: CTCATCCACTCGGTGGAGCCACTGACTGGGCCTGTA...TCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGGCGTCGCGTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGTGCACACGAGGCTGCTaGAGACCTCGTACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQCTRGC*RPRTPG
Trigger: CCCAGGAGTACGAGGTCTCCAGCAGCCTCGTGTGCA...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTACTCCGGCTCATCACTTaGCTTCACCAGGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVLRLIT*LHQVPG
Trigger: CCCTGGCACCTGGTGAAGCCAAGTGATGAGCCGGAG...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGACGTGCCATTGGGAGTaGATGCAGTTGGTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLTCHWE*MQLVEG
Trigger: CCCTTCCACCAACTGCATTCACTCCCAATGGCACGT...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp GGGCCATCCTGGAAAAGGTGCAGGTTCCTGCCTAGCAGCCGGATTTCCCGCTCCCGAAAAGCTCTAGACTaGGCCTGCAGGTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GPSWKRCRFLPSSRISRSRKALD*ACRSRR
Trigger: GCGGCGGGACCTGCAGGCTCAGTCTAGAGCTTTTCG...GGAGCGGGAAATCCGGCTGCTAGGCAGGAACCTGCACCTTTTCCAGGATGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTACTGTGCAGCTGCCCTTaGCTATCACCCAGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVLCSCP*LSPRKA
Trigger: CGCTTTCCTGGGTGATAGTCAAGGGCAGCTGCACAG...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp AGCGTGGCAGGCGTGGGGCGTGGGCTGGTCTCACACCGCAGTTGTTCTGACTGCAAAGTGGCAGGAATATaGCTCCCCTGGCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: SVAGVGRGLVSHRSCSDCKVAGI*LPWPQG
Trigger: CCCCTGTGGCCAGGGGAGTCATATTCCTGCCACTTT...GCAGTCAGAACAACTGCGGTGTGAGACCAGCCCACGCCCCACGCCTGCCACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTCGCCGCCTTCTCTCGTaGGCCAGTCCAGGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSRRLLS*ASPGRA
Trigger: AGCCCGCCCTGGACTGGCTCACGAGAGAAGGCGGCG...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGACACCGCAGTTGTTCTaGCTGCTGCTCCGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGTPQLF*LLLRQQ
Trigger: TTGCTGCCGGAGCAGCAGTCAGAACAACTGCGGTGT...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGTGGGGCCAGCAGAGGTaGTGTTGGGGTCCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGWGQQR*CWGPRY
Trigger: ATACCTTGGACCCCAACATCACCTCTGCTGGCCCCA...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTCCGTCCAAGCCCCTGGCTGGGCTGCAGCATTCTCGAGACCACGGTCACCCGTCCCCATCTGCACCGTaGACTCAGGCAAAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PPSKPLAGLQHSRDHGHPSPSAP*TQAKSQ
Trigger: CTGACTCTTTGCCTGAGTTCACGGTGCAGATGGGGA...CGGGTGACCGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGGGACGTGGCCACAGCTaGAGCCTGGATCAGCCCGTA +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQGRGHS*SLDQPV
Trigger: TACGGGCTGATCCAGGCTGCAGCTGTGGCCACGTCC...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp ACACTCCCAGGCTTGTGCCGGAATGGCATGGTGGGGTCCTCAGGGTTGAGTGGCGGACGTGGCCACAGCTaGAGCCTGGATCAGCCCGTA +
Preference number: 4 (lower is better)
Translates to: TLPGLCRNGMVGSSGLSGGRGHS*SLDQPV
Trigger: TACGGGCTGATCCAGGCTGCAGCTGTGGCCACGTCC...GCCACTCAACCCTGAGGACCCCACCATGCCATTCCGGCACAAGCCTGGGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGTACACCCCCAGCGGCTaGTCACACAGGCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQYTPSG*SHRPGT
Trigger: AGTGCCAGGCCTGTGTGAGCAGCCGCTGGGGGTGTA...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGATGCCCAGCACATCCTaGACATGCTGGCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQMPSTS*TCWPRL
Trigger: CAACCTGGGCCAGCATGTGCAGGATGTGCTGGGCAT...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGATGCCCAGCACATCCTaGACATGCTGGCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGMPSTS*TCWPRL
Trigger: CAACCTGGGCCAGCATGTGCAGGATGTGCTGGGCAT...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp GTGATGCACACGAGGCTGCTGGAGACCTCGTACTCCTGGGCATCCACAGCACAGGGGTCCAAGGGAACATaGCGTCTCCGGGACCACGCG +
Preference number: 4 (lower is better)
Translates to: VMHTRLLETSYSWASTAQGSKGT*RLRDHA
Trigger: CGCGTGGTCCCGGAGACGGCATGTTCCCTTGGACCC...CTGTGCTGTGGATGCCCAGGAGTACGAGGTCTCCAGCAGCCTCGTGTGCATCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp CCTCCGTCCAAGCCCCTGGCTGGGCTGCAGCATTCTCGAGACCACGGTCACCCGCACGGCTCCTCAAATTaGTGGCTACTGCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: PPSKPLAGLQHSRDHGHPHGSSN*WLLQEG
Trigger: ACCCTCCTGCAGTAGCCAGCAATTTGAGGAGCCGTG...CGGGTGACCGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGTCAGGGTTGAGTGGCTaGAGGGTGGGGTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQSGLSG*RVGSAS
Trigger: TGAGGCCGACCCCACCCTGCAGCCACTCAACCCTGA...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCGGTCCCGCACACTaGTCTCCAGATTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGSGPAH*SPDSPA
Trigger: AGCTGGAGAATCTGGAGAGCAGTGTGCGGGACCGCT...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGAAGCTTCCCATGCAGTaGCACGGTGAGCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLKLPMQ*HGEQRC
Trigger: GCATCTCTGCTCACCGTGGCACTGCATGGGAAGCTT...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGCCATGCTGCTGGGCCTaGTCATCCAGCAGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQPCCWA*SSSRSK
Trigger: CTTTGACCTGCTGGATGAGCAGGCCCAGCAGCATGG...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACCTCCCGCGCGGCGCTaGCACCGCCGGGAACAAAGG +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSPPARR*HRREQR
Trigger: CCTTTGTTCCCGGCGGTGGCAGCGCCGCGCGGGAGG...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358536.8
CDS-3UTR CCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTAATCAGGCATCACAGGTaGCAGGCAGTCCCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVIRHHR*QAVPAV
Trigger: GACAGCAGGGACTGCCTGCCACCTGTGATGCCTGAT...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TGTCTCCTGGGCCATCCTGGAAAAGGTGCAGGTTCCTGCCTAGCAGCCGGATTTGTCCCCAGGCCGCTCTaGCCGCAGCAGCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: CLLGHPGKGAGSCLAAGFVPRPL*PQQQLL
Trigger: GAGCAGCTGCTGCTGCGGCCAGAGCGGCCTGGGGAC...AAATCCGGCTGCTAGGCAGGAACCTGCACCTTTTCCAGGATGGCCCAGGAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCACCACCTCCCTGGACGTaGCCACAGCTGCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPPPPWT*PQLQPG
Trigger: TCCAGGCTGCAGCTGTGGCCACGTCCAGGGAGGTGG...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GCAAAGTCGTGTTCTGAGACACCACGTCCTCTTCCCGGCACCTCCACCGCTGTGCATGCGCCACCTCCCTaGACGTGGCCACAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: AKSCSETPRPLPGTSTAVHAPPP*TWPQLQ
Trigger: CTGCAGCTGTGGCCACGTCCAGGGAGGTGGCGCATG...CACAGCGGTGGAGGTGCCGGGAAGAGGACGTGGTGTCTCAGAACACGACTTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp TCTTGGCGTCTGTACCACGTCCAGATTCTGGCCACGGACGCATATCTCACGTCCGGACCCGGCTGGCCATaGGGCTGGGCGTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SWRLYHVQILATDAYLTSGPGWP*GWACGL
Trigger: CAGACCACACGCCCAGCCCCATGGCCAGCCGGGTCC...GGACGTGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAGACGCCAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACCAGCGGGACCCGGCTaGCCATGGGGCTGGGCGTGT +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSPAGPG*PWGWAC
Trigger: ACACGCCCAGCCCCATGGCCAGCCGGGTCCCGCTGG...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp ACACTCCCAGGCTTGTGCCGGAATGGCATGGTGGGGTCCTCAGGGTTGAGTGGCGTGGCCATCGCTCCCTaGGCCCAAGTAGACCCTGTG +
Preference number: 4 (lower is better)
Translates to: TLPGLCRNGMVGSSGLSGVAIAP*AQVDPV
Trigger: CACAGGGTCTACTTGGGCCCAGGGAGCGATGGCCAC...GCCACTCAACCCTGAGGACCCCACCATGCCATTCCGGCACAAGCCTGGGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGTCCAGGGGCACTGTaGGATGAAGAGCCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPGPGAL*DEEPRG
Trigger: GCCCCGAGGCTCTTCATCCCACAGTGCCCCTGGACC...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGATTTCCCGCTCCACATaGACCGGCATCAACGTGGAG +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLISRST*TGINVE
Trigger: CTCCACGTTGATGCCGGTCCATGTGGAGCGGGAAAT...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGGAGGGTCCAAGGGAACATGCCGTCTCCGGGACCACGCGACGCCTCCGTCCAATTTCCCGCTCCACATaGACCGGCATCAACGTGGAG +
Preference number: 4 (lower is better)
Translates to: QEGPREHAVSGTTRRLRPISRST*TGINVE
Trigger: CTCCACGTTGATGCCGGTCCATGTGGAGCGGGAAAT...TGGACGGAGGCGTCGCGTGGTCCCGGAGACGGCATGTTCCCTTGGACCCTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGCAGGTGACATGGCACTaGGTATCTGGAGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLQVTWH*VSGGGS
Trigger: TGAGCCACCTCCAGATACCCAGTGCCATGTCACCTG...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GTTGGAGCCCCTGATGGTGACACGGGTGCCTCCGTCTACAGGCCCAGTCAGTGGAGCCATACTGGGGCATaGCAGTTTGGCAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: VGAPDGDTGASVYRPSQWSHTGA*QFGSGC
Trigger: GCAGCCGCTGCCAAACTGCCATGCCCCAGTATGGCT...CCACTGACTGGGCCTGTAGACGGAGGCACCCGTGTCACCATCAGGGGCTCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGCCGGGTCACACAACGTaGACGCTCCCCCTCACACCA +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQPGHTT*TLPLTP
Trigger: TGGTGTGAGGGGGAGCGTCCACGTTGTGTGACCCGG...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp ACCACCACTCGGATGTCCTCCAGCCGCCCAGTCAGGAGCTTGGAGCCATTCAGGCCGGGTCACACAACGTaGACGCTCCCCCTCACACCA +
Preference number: 4 (lower is better)
Translates to: TTTRMSSSRPVRSLEPFRPGHTT*TLPLTP
Trigger: TGGTGTGAGGGGGAGCGTCCACGTTGTGTGACCCGG...CCTGAATGGCTCCAAGCTCCTGACTGGGCGGCTGGAGGACATCCGAGTGGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CTGTACCACGTCCAGATTCTGGCCACGGACGCATATCTCACGTCCTCCACTGAGGGCAGGCGTGGGGCGTaGGCTGGTCTCACACCGCAG +
Preference number: 4 (lower is better)
Translates to: LYHVQILATDAYLTSSTEGRRGA*AGLTPQ
Trigger: CTGCGGTGTGAGACCAGCCCACGCCCCACGCCTGCC...CTCAGTGGAGGACGTGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGGGTCACCCGGATTCTTaGCGTCTGTACCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGGHPDS*RLYHVQ
Trigger: CTGGACGTGGTACAGACGCCAAGAATCCGGGTGACC...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GTCTCCAACCACCACTCGGATGTCCTCCAGCCGCCCAGTCAGGAGCTTGGAGCCGTCCAAGCCCCTGGCTaGGCTGCAGCATTCTCGAGA +
Preference number: 4 (lower is better)
Translates to: VSNHHSDVLQPPSQELGAVQAPG*AAAFSR
Trigger: TCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGAC...GGCTCCAAGCTCCTGACTGGGCGGCTGGAGGACATCCGAGTGGTGGTTGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGCTCCTCAAATTGCTaGCTACTGCAGGAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLGSSNC*LLQEGP
Trigger: TGGACCCTCCTGCAGTAGCCAGCAATTTGAGGAGCC...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACGAGGGCATGGTGCCGTaGCAGGGGCTGCTCCACGGG +
Preference number: 4 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYEGMVP*QGLLHG
Trigger: CCCGTGGAGCAGCCCCTGCCACGGCACCATGCCCTC...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGGCTGAAAAGGTGCGCTaGCTCTCCAGCGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQAEKVR*LSSVWM
Trigger: CATCCACACGCTGGAGAGCCAGCGCACCTTTTCAGC...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGTACATCCTCCAGCATTaGGGTCCGCTCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGYILQH*GPLSRD
Trigger: GTCCCTGGAGAGCGGACCCCAATGCTGGAGGATGTA...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTAAGGCACCTAAGAAGGTaGCCTCTCCTCCGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVRHLRR*PLLRAS
Trigger: GGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCT...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGTGTCACAGGGTCGCTaGACTCGGGGAGCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPVSQGR*TRGAGW
Trigger: CCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACAC...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGGTCTCCCCAGGGGCCTaGAGTCTCTTCCAGCCACTC +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQVSPGA*SLFQPL
Trigger: GAGTGGCTGGAAGAGACTCCAGGCCCCTGGGGAGAC...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp AGACCACGGTCACCCGGATTCTTGGCGTCTGTACCACGTCCAGATTCTGGCCACACAGGGCCCGGGTTGTaGTGGGTGGAATGCCACCCC +
Preference number: 4 (lower is better)
Translates to: RPRSPGFLASVPRPDSGHTGPGL*WVECHP
Trigger: GGGGTGGCATTCCACCCATCACAACCCGGGCCCTGT...GTGGCCAGAATCTGGACGTGGTACAGACGCCAAGAATCCGGGTGACCGTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCACGAAAAGCTCTAGACTaGGCCTGCAGGTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPRKALD*ACRSRR
Trigger: GCGGCGGGACCTGCAGGCTCAGTCTAGAGCTTTTCG...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp GGGGTCCTCAGGGTTGAGTGGCTGCAGGGTGGGGTCGGCCTCATAGGAGAAAGGCTGTGCAGCTGCCCTTaGCTATCACCCAGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: GVLRVEWLQGGVGLIGERLCSCP*LSPRKA
Trigger: CGCTTTCCTGGGTGATAGTCAAGGGCAGCTGCACAG...CCTTTCTCCTATGAGGCCGACCCCACCCTGCAGCCACTCAACCCTGAGGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp AGCGTGGCAGGCGTGGGGCGTGGGCTGGTCTCACACCGCAGTTGTTCTGACTGCATGGGCGGAGTTCAGTaGCCGCCACACAGTCATAGA +
Preference number: 4 (lower is better)
Translates to: SVAGVGRGLVSHRSCSDCMGGVQ*PPHSHR
Trigger: TCTATGACTGTGTGGCGGTCACTGAACTCCGCCCAT...GCAGTCAGAACAACTGCGGTGTGAGACCAGCCCACGCCCCACGCCTGCCACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTAGGGGCACTGTGGGATaGAGAGCCTCGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSRGTVG*RASGPG
Trigger: CCCTGGCCCCGAGGCTCTTCATCCCACAGTGCCCCT...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGATCAACGTGGAGCCCTaGACGCTCTCCACACAGGGG +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQINVEP*TLSTQG
Trigger: CCCCTGTGTGGAGAGCGTTCAGGGCTCCACGTTGAT...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGGGCAAAGTCGTGTTCTaGGACACCACGTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQGKVVF*DTTSSS
Trigger: GGAAGAGGACGTGGTGTCTCAGAACACGACTTTGCC...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGTCCCCATCTGCACCGTaGACTCAGGCAAAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGSPSAP*TQAKSQ
Trigger: CTGACTCTTTGCCTGAGTTCACGGTGCAGATGGGGA...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGCCAGGAGGTCACTGGTaGGATCGGTCATCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGPGGHW*DRSSQS
Trigger: TGACTGAGATGACCGATCTCACCAGTGACCTCCTGG...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGGGGCAACCAGGTCACTaGGCAGAGTGCGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQGQPGH*AECGGC
Trigger: ACATCCTCCGCACTCTGCTCAGTGACCTGGTTGCCC...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGACTCCACATCCTCTCTaGGCAGGCGGTTGTCGTTCA +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQTPHPL*AGGCRS
Trigger: TGAACGACAACCGCCTGCTCAGAGAGGATGTGGAGT...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGCATACAGAAGTTTGTTaGTCGGGGAGTCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGHTEVC*SGSPGP
Trigger: TGGGCCGGGACTCCCCGATCAACAAACTTCTGTATG...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAAAGAGCACCTCCCCATaGGCCACCTCCCTGGACGTG +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPKSTSP*ATSLDV
Trigger: CACGTCCAGGGAGGTGGCGCATGGGGAGGTGCTCTT...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAAACGGCGACTGCACCTaGCAAGGAGCACGCACCACC +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPNGDCT*QGARTT
Trigger: GGTGGTGCGTGCTCCTTGGCAGGTGCAGTCGCCGTT...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TTCTCCCCCTCCACGGAGAACACACTCCCAGGCTTGTGCCGGAATGGCATGGTGAAGCTCCATAGCCACTaGTCTGGGCCCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: FSPSTENTLPGLCRNGMVKLHSH*SGPWPL
Trigger: GAGGGGCCAGGGCCCAGAGCAGTGGCTATGGAGCTT...CACCATGCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCATACACCCCCAGCGGCTaGTCACACAGGCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPYTPSG*SHRPGT
Trigger: AGTGCCAGGCCTGTGTGAGCAGCCGCTGGGGGTGTA...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp GCAAAGTCGTGTTCTGAGACACCACGTCCTCTTCCCGGCACCTCCACCGCTGTGTCAGGGTTGAGTGGCTaGAGGGTGGGGTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: AKSCSETPRPLPGTSTAVSGLSG*RVGSAS
Trigger: TGAGGCCGACCCCACCCTGCAGCCACTCAACCCTGA...CACAGCGGTGGAGGTGCCGGGAAGAGGACGTGGTGTCTCAGAACACGACTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp ACTGCAGGAGGGTCCAAGGGAACATGCCGTCTCCGGGACCACGCGACGCCTCCGCGCAAGTTCCCCATCTaGACCGTGAACTCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: TAGGSKGTCRLRDHATPPRKFPI*TVNSGK
Trigger: TTTGCCTGAGTTCACGGTGCAGATGGGGAACTTGCG...CGGAGGCGTCGCGTGGTCCCGGAGACGGCATGTTCCCTTGGACCCTCCTGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCACACGGTGAGCAGAGATaGCACGTAGGCACGGTCCCG +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPHGEQR*HVGTVP
Trigger: CGGGACCGTGCCTACGTGGCATCTCTGCTCACCGTG...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp AGCGTGGCAGGCGTGGGGCGTGGGCTGGTCTCACACCGCAGTTGTTCTGACTGCCATCACCTGATGGCTTaGAACCATGGGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: SVAGVGRGLVSHRSCSDCHHLMA*NHGPSI
Trigger: GATGCTGGGCCCATGGTTGCAAGCCATCAGGTGATG...GCAGTCAGAACAACTGCGGTGTGAGACCAGCCCACGCCCCACGCCTGCCACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCAGGCTTGTGCCGGAATGGCATGGTGGGGTCCTCAGGGTTGAGTGGCTGCAGGGGGAGTGAATGCAGTTaGTGGAAGGGGCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: PGLCRNGMVGSSGLSGCRGSECS*WKGLEG
Trigger: ACCCTCCAGCCCCTTCCACCAACTGCATTCACTCCC...CCTGCAGCCACTCAACCCTGAGGACCCCACCATGCCATTCCGGCACAAGCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp GGGGTCCTCAGGGTTGAGTGGCTGCAGGGTGGGGTCGGCCTCATAGGAGAAAGGAGCCCAGGGCTCAGCTaGAACAGGAAGTTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: GVLRVEWLQGGVGLIGERSPGLS*NRKLVA
Trigger: GGCTACCAACTTCCTGTTCCAGCTGAGCCCTGGGCT...CCTTTCTCCTATGAGGCCGACCCCACCCTGCAGCCACTCAACCCTGAGGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACGGCCGGTGGACACTGTaGCCTCCAGCTGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYGRWTL*PPAAAQ
Trigger: CTGGGCTGCAGCTGGAGGCCACAGTGTCCACCGGCC...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GGGGTCCTCAGGGTTGAGTGGCTGCAGGGTGGGGTCGGCCTCATAGGAGAAAGGATCAGGCATCACAGGTaGCAGGCAGTCCCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: GVLRVEWLQGGVGLIGERIRHHR*QAVPAV
Trigger: GACAGCAGGGACTGCCTGCCACCTGTGATGCCTGAT...CCTTTCTCCTATGAGGCCGACCCCACCCTGCAGCCACTCAACCCTGAGGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CAGGTGGTGCCGCGTCAGCGTCTTCACCACACAGGGGCCATCCCCTATCATAGCTGTTCACAGACCCCCTaGTGCACGCTCCCGCATACC +
Preference number: 4 (lower is better)
Translates to: QVVPRQRLHHTGAIPYHSCSQTP*CTLPHT
Trigger: GGTATGCGGGAGCGTGCACCAGGGGGTCTGTGAACA...GCTATGATAGGGGATGGCCCCTGTGTGGTGAAGACGCTGACGCGGCACCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCGGCTGGCCATGGGGCTaGGCGTGTGGTCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSGWPWG*ACGLSH
Trigger: GTGGCTCAGACCACACGCCCAGCCCCATGGCCAGCC...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCAGGACCCGGCTGGCCATaGGGCTGGGCGTGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSGPGWP*GWACGL
Trigger: CAGACCACACGCCCAGCCCCATGGCCAGCCGGGTCC...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TGCTGGCAGGTGACATGGCACTGGGTATCTGGAGGTGGCTCACACTCGACCCGGACTCCAGAATTGGTGTaGCTTCCAGCGGGACCCGGC +
Preference number: 4 (lower is better)
Translates to: CWQVTWHWVSGGGSHSTRTPELV*LPAGPG
Trigger: GCCGGGTCCCGCTGGAAGCCACACCAATTCTGGAGT...CCGGGTCGAGTGTGAGCCACCTCCAGATACCCAGTGCCATGTCACCTGCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGACTGCAGACCCCTGCTaGATGCTCTGTGTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLTADPC*MLCVEY
Trigger: ATACTCCACACAGAGCATCCAGCAGGGGTCTGCAGT...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGTGTTGGCAGGACTCATaGCTGCCACTTGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGCWQDS*LPLADS
Trigger: GCTGTCTGCAAGTGGCAGCCATGAGTCCTGCCAACA...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCCAGGTTCTCCCCCTCCACGGAGAACACACTCCCAGGCTTGTGCCGGAATGGCTCACACGAGGCCTTGTaGGTGCACAGGTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SRFSPSTENTLPGLCRNGSHEAL*VHRCCQ
Trigger: CTGGCAGCACCTGTGCACCCACAAGGCCTCGTGTGA...GCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAACCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGAGAGGAGGGTGGAAGTaGAGAAGGCGGGTGCGTCAC +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQRGGWK*RRRVRH
Trigger: GTGACGCACCCGCCTTCTCCACTTCCACCCTCCTCT...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGGGACCGGCATCAACGTaGAGCCCTGAACGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQGPAST*SPERSP
Trigger: TGGAGAGCGTTCAGGGCTCCACGTTGATGCCGGTCC...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGGTGGTGCCGCGTCAGCGTCTTCACCACACAGGGGCCATCCCCTATCATAGCGGACCGGCATCAACGTaGAGCCCTGAACGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: QVVPRQRLHHTGAIPYHSGPAST*SPERSP
Trigger: TGGAGAGCGTTCAGGGCTCCACGTTGATGCCGGTCC...GCTATGATAGGGGATGGCCCCTGTGTGGTGAAGACGCTGACGCGGCACCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCACTGGGTATCTGGAGGTaGCTCACACTCGACCCGGGC +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPLGIWR*LTLDPG
Trigger: GCCCGGGTCGAGTGTGAGCCACCTCCAGATACCCAG...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGATGGCACTGGGTATCTaGAGGTGGCTCACACTCGAC +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGMALGI*RWLTLD
Trigger: GTCGAGTGTGAGCCACCTCCAGATACCCAGTGCCAT...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCCAGGTTCTCCCCCTCCACGGAGAACACACTCCCAGGCTTGTGCCGGAATGGCCTGAGCTGGTGCTGCTaGCAGGTGACATGGCACTGG +
Preference number: 4 (lower is better)
Translates to: SRFSPSTENTLPGLCRNGLSWCC*QVTWHW
Trigger: CCAGTGCCATGTCACCTGCCAGCAGCACCAGCTCAG...GCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAACCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGTGGGGCATGGCAGTTTaGCAGCGGCTGCAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQWGMAV*QRLQSP
Trigger: TGGAGACTGCAGCCGCTGCCAAACTGCCATGCCCCA...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CGCAAGTTCCCCATCTGCACCGTGAACTCAGGCAAAGAGTCAGGTGCCTCTCGGAGTGGCTCCACCGAGTaGATGAGGGGCGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RKFPICTVNSGKESGASRSGSTE*MRGAGH
Trigger: GTGCCCAGCGCCCCTCATCCACTCGGTGGAGCCACT...CCGAGAGGCACCTGACTCTTTGCCTGAGTTCACGGTGCAGATGGGGAACTTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGGAGACCTCGTACTCCTaGGCATCCACAGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQETSYS*ASTAQG
Trigger: GCCCTGTGCTGTGGATGCCCAGGAGTACGAGGTCTC...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GGGCCATCCTGGAAAAGGTGCAGGTTCCTGCCTAGCAGCCGGATTTCCCGCTCCTGCACACGAGGCTGCTaGAGACCTCGTACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GPSWKRCRFLPSSRISRSCTRGC*RPRTPG
Trigger: CCCAGGAGTACGAGGTCTCCAGCAGCCTCGTGTGCA...GGAGCGGGAAATCCGGCTGCTAGGCAGGAACCTGCACCTTTTCCAGGATGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp GGGCCATCCTGGAAAAGGTGCAGGTTCCTGCCTAGCAGCCGGATTTCCCGCTCCCGCGGGCCGGGAAGATaGAATGGACCTTCGGATCCT +
Preference number: 4 (lower is better)
Translates to: GPSWKRCRFLPSSRISRSRGPGR*NGPSDP
Trigger: AGGATCCGAAGGTCCATTCCATCTTCCCGGCCCGCG...GGAGCGGGAAATCCGGCTGCTAGGCAGGAACCTGCACCTTTTCCAGGATGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCGGCAGGCGTGGGGCGTaGGCTGGTCTCACACCGCAG +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFGRRGA*AGLTPQ
Trigger: CTGCGGTGTGAGACCAGCCCACGCCCCACGCCTGCC...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCGGAGCGTGGCAGGCGTaGGGCGTGGGCTGGTCTCAC +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFGAWQA*GVGWSH
Trigger: GTGAGACCAGCCCACGCCCCACGCCTGCCACGCTCC...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTCAGCCACAGGGAGCGTaGCAGGCGTGGGGCGTGGGC +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSQPQGA*QAWGVG
Trigger: GCCCACGCCCCACGCCTGCCACGCTCCCTGTGGCTG...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGGTCCAAGCCCCTGGCTaGGCTGCAGCATTCTCGAGA +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQVQAPG*AAAFSR
Trigger: TCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGAC...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTACCACCACCTCCTCCTTaGACATTGCAAGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVPPPPP*TLQGPG
Trigger: ACCTGGACCTTGCAATGTCCAAGGAGGAGGTGGTGG...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGCCTTTGCCTGGGAGATaGTGTCACAGTCTAGGACCT +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLPLPGR*CHSLGP
Trigger: AGGTCCTAGACTGTGACACCATCTCCCAGGCAAAGG...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGCGAGGGTCTGGCCGCTaGGTGAGAGGCACTCCTTTA +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQRGSGR*VRGTPL
Trigger: TAAAGGAGTGCCTCTCACCCAGCGGCCAGACCCTCG...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCTCAGGGATGGCCTTaGCGCGCTCACGCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSSQGWP*RAHAPR
Trigger: GCGGGGAGCGTGAGCGCGCCAAGGCCATCCCTGAGA...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGGAGCCACCAGGAGACTaGGAGTCACCTTCCACTAAC +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGEPPGD*ESPSTN
Trigger: GTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTC...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCCCCGGGTCTAGGAGGTaGATCCAGCAGGGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSPGSRR*IQQGRG
Trigger: GCCTCGGCCCTGCTGGATCCACCTCCTAGACCCGGG...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
3UTR CAA 72 bp AGGTTCTCCCCCTCCACGGAGAACACACTCCCAGGCTaGTGCCGGAATGGCATGGTGGGGTCCTCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: RFSPSTENTLPG*CRNGMVGSSGL
Trigger: CAACCCTGAGGACCCCACCATGCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCCCAGCCCCACCGTGCTaGCCGCAGGATCATTGGCAG +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSPAPPC*PQDHWQ
Trigger: CTGCCAATGATCCTGCGGTCAGCACGGTGGGGCTGG...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCACAGGGCCCGGGTTGTaGTGGGTGGAATGCCACCCC +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSTGPGL*WVECHP
Trigger: GGGGTGGCATTCCACCCATCACAACCCGGGCCCTGT...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGCGCCGCCTTCTCTCGTaGGCCAGTCCAGGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPRRLLS*ASPGRA
Trigger: AGCCCGCCCTGGACTGGCTCACGAGAGAAGGCGGCG...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CGCAAGTTCCCCATCTGCACCGTGAACTCAGGCAAAGAGTCAGGTGCCTCTCGGGCACTCCAGCCACCGTaGCCATGCCCAGCACATCCT +
Preference number: 4 (lower is better)
Translates to: RKFPICTVNSGKESGASRALQPP*PCPAHP
Trigger: AGGATGTGCTGGGCATGGTCACGGTGGCTGGAGTGC...CCGAGAGGCACCTGACTCTTTGCCTGAGTTCACGGTGCAGATGGGGAACTTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp GCACGTGATGAGCTGGGAGGAGTTGACATGGCACGGCTCCTCAAATTGCTGGCTTGGAGCCATTCAGGGTaGGACGGGTGCCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ARDELGGVDMARLLKLLAWSHSG*DGCPQL
Trigger: GAGCTGGGGGCACCCGTCTCACCCTGAATGGCTCCA...AGCCAGCAATTTGAGGAGCCGTGCCATGTCAACTCCTCCCAGCTCATCACGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCATGCTCCGGCAGCAAGTaGCAAGGCTGGTCTCCAACC +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPCSGSK*QGWSPT
Trigger: GGTTGGAGACCAGCCTTGTCACTTGCTGCCGGAGCA...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CAGGTGGTGCCGCGTCAGCGTCTTCACCACACAGGGGCCATCCCCTATCATAGCTGGGGCCAGCAGAGGTaGTGTTGGGGTCCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: QVVPRQRLHHTGAIPYHSWGQQR*CWGPRY
Trigger: ATACCTTGGACCCCAACATCACCTCTGCTGGCCCCA...GCTATGATAGGGGATGGCCCCTGTGTGGTGAAGACGCTGACGCGGCACCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCGGCACGGTCCCGAGCTaGAAAGGTGCGCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSGTVPS*KGALAL
Trigger: GAGAGCCAGCGCACCTTTTCAGCTCGGGACCGTGCC...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCCTACCCCATGAGCCTTaGGGCCCCGGGTCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSLPHEP*GPGSRR
Trigger: CCTCCTAGACCCGGGGCCTCAAGGCTCATGGGGTAG...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACCTGGGTACTACCCCATaGGCCTTGAGGCCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYLGTTP*ALRPRV
Trigger: GACCCGGGGCCTCAAGGCTCATGGGGTAGTACCCAG...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTGTGGCAGGCAGTCCCTaGTGTCTAGCACAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSVAGSP*CLAQGR
Trigger: CCGGCCCTGTGCTAGACAGCAGGGACTGCCTGCCAC...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCAGCAGCTGCTCGAGCTaGCCCAGGCGCCGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSSSCSS*PRRRCS
Trigger: TGAACAGCGGCGCCTGGGGCAGCTCGAGCAGCTGCT...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTGGAGAGGCGGCCCACTaGCAGCTTGGCTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSGEAAH*QLGCLL
Trigger: GAGGAGACAGCCAAGCTGGCAGTGGGCCGCCTCTCC...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CGCAAGTTCCCCATCTGCACCGTGAACTCAGGCAAAGAGTCAGGTGCCTCTCGGAAGAGCACCTCCCCATaGGCCACCTCCCTGGACGTG +
Preference number: 4 (lower is better)
Translates to: RKFPICTVNSGKESGASRKSTSP*ATSLDV
Trigger: CACGTCCAGGGAGGTGGCGCATGGGGAGGTGCTCTT...CCGAGAGGCACCTGACTCTTTGCCTGAGTTCACGGTGCAGATGGGGAACTTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp CCAGGCTTGTGCCGGAATGGCATGGTGGGGTCCTCAGGGTTGAGTGGCTGCAGGAGCCGAGGAGAAAGCTaGAAAGAGCACCTCCCCATG +
Preference number: 4 (lower is better)
Translates to: PGLCRNGMVGSSGLSGCRSRGES*KEHLPM
Trigger: CATGGGGAGGTGCTCTTTGCAGCTTTCTCCTCGGCT...CCTGCAGCCACTCAACCCTGAGGACCCCACCATGCCATTCCGGCACAAGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp GCAAAGTCGTGTTCTGAGACACCACGTCCTCTTCCCGGCACCTCCACCGCTGTGACTCAGAACGGCGACTaGACCTGCCAAGGAGCACGC +
Preference number: 4 (lower is better)
Translates to: AKSCSETPRPLPGTSTAVTQNGD*TCQGAR
Trigger: GCGTGCTCCTTGGCAGGTGCAGTCGCCGTTCTGAGT...CACAGCGGTGGAGGTGCCGGGAAGAGGACGTGGTGTCTCAGAACACGACTTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAACACAGGCCTGGCACTaGGCAGATGGGCGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPTQAWH*ADGRSS
Trigger: TGAACTCCGCCCATCTGCGCAGTGCCAGGCCTGTGT...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp GCAAAGTCGTGTTCTGAGACACCACGTCCTCTTCCCGGCACCTCCACCGCTGTGACACAGGCCTGGCACTaGGCAGATGGGCGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: AKSCSETPRPLPGTSTAVTQAWH*ADGRSS
Trigger: TGAACTCCGCCCATCTGCGCAGTGCCAGGCCTGTGT...CACAGCGGTGGAGGTGCCGGGAAGAGGACGTGGTGTCTCAGAACACGACTTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGTTGTGGGTGCACAGGTaGTGCCAGACACACCAGTTA +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQLWVHR*CQTHQL
Trigger: TAACTGGTGTGTCTGGCAGCACCTGTGCACCCACAA...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGTTGTGGGTGCACAGGTaGTGCCAGACACACCAGTTA +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGLWVHR*CQTHQL
Trigger: TAACTGGTGTGTCTGGCAGCACCTGTGCACCCACAA...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp GTGATGCACACGAGGCTGCTGGAGACCTCGTACTCCTGGGCATCCACAGCACAGAGCACATCCTGCACATaGTGGCCCAGGTTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: VMHTRLLETSYSWASTAQSTSCT*WPRLEP
Trigger: GGGCTCCAACCTGGGCCAGCATGTGCAGGATGTGCT...CTGTGCTGTGGATGCCCAGGAGTACGAGGTCTCCAGCAGCCTCGTGTGCATCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTACAAATTGCTGGCTACTaGAGGAGGGTCCAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVQIAGY*RRVQGN
Trigger: GTTCCCTTGGACCCTCCTGCAGTAGCCAGCAATTTG...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGCAAATTGCTGGCTACTaGAGGAGGGTCCAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGQIAGY*RRVQGN
Trigger: GTTCCCTTGGACCCTCCTGCAGTAGCCAGCAATTTG...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp GGCGTGGGCTGGTCTCACACCGCAGTTGTTCTGACTGCTGCTCCGGCAGCAAGTAGGCAAAGAGTCAGGTaGCTCTCGGAGGGCATGGTG +
Preference number: 4 (lower is better)
Translates to: GVGWSHTAVVLTAAPAASRQRVR*LSEGMV
Trigger: CACCATGCCCTCCGAGAGGCACCTGACTCTTTGCCT...ACTTGCTGCCGGAGCAGCAGTCAGAACAACTGCGGTGTGAGACCAGCCCACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCACCCGAGCTGAAAAGGTaGGCTGGCTCTCCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPPELKR*AGSPAC
Trigger: ACACGCTGGAGAGCCAGCGCACCTTTTCAGCTCGGG...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GGCGTCTGTACCACGTCCAGATTCTGGCCACGGACGCATATCTCACGTCCTCCAAGAGGGTGCCTGAGGTaGGGTCCCTTGCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: GVCTTSRFWPRTHISRPPRGCLR*GPLPGA
Trigger: AGCACCTGGCAAGGGACCCCACCTCAGGCACCCTCT...TGGAGGACGTGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAGACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp GTGATGCACACGAGGCTGCTGGAGACCTCGTACTCCTGGGCATCCACAGCACAGTTGGTAGGCTGGGCCTaGGGGCACTCATCAGGCATC +
Preference number: 4 (lower is better)
Translates to: VMHTRLLETSYSWASTAQLVGWA*GHSSGI
Trigger: GATGCCTGATGAGTGCCCCCAGGCCCAGCCTACCAA...CTGTGCTGTGGATGCCCAGGAGTACGAGGTCTCCAGCAGCCTCGTGTGCATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGGTTGTTGGTAGGCTaGGCCTGGGGGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPGLLVG*AWGHSS
Trigger: TGATGAGTGCCCCCAGGCCCAGCCTACCAACAACCC...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACGTCCCCAGGCCGCTCTaGCCGCAGCAGCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNVPRPL*PQQQLL
Trigger: GAGCAGCTGCTGCTGCGGCCAGAGCGGCCTGGGGAC...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACGTCCCCAGGCCGCTCTaGCCGCAGCAGCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYVPRPL*PQQQLL
Trigger: GAGCAGCTGCTGCTGCGGCCAGAGCGGCCTGGGGAC...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGGGCCCACTGCCAGCTTaGCTGTCTCCTCATAGGAGA +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQGPLPA*LSPHRR
Trigger: TCTCCTATGAGGAGACAGCCAAGCTGGCAGTGGGCC...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCAGGCTGGCCATGGGGCTaGGCGTGTGGTCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSGWPWG*ACGLSH
Trigger: GTGGCTCAGACCACACGCCCAGCCCCATGGCCAGCC...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TGCTGGCAGGTGACATGGCACTGGGTATCTGGAGGTGGCTCACACTCGACCCGGTGGCCACTCCAGAATTaGTGTGGCTTCCAGCGGGAC +
Preference number: 4 (lower is better)
Translates to: CWQVTWHWVSGGGSHSTRWPLQN*CGFQRD
Trigger: GTCCCGCTGGAAGCCACACCAATTCTGGAGTGGCCA...CCGGGTCGAGTGTGAGCCACCTCCAGATACCCAGTGCCATGTCACCTGCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CAGGCCTCCCGGGTCACACAACGTGGACGCTCCCCCTCACACCACACACAGCCAACTGCAGACCCCTGCTaGATGCTCTGTGTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: QASRVTQRGRSPSHHTQPTADPC*MLCVEY
Trigger: ATACTCCACACAGAGCATCCAGCAGGGGTCTGCAGT...TGGCTGTGTGTGGTGTGAGGGGGAGCGTCCACGTTGTGTGACCCGGGAGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGGCACCACCCACAGTATaGGTCCCTGTGAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQAPPTV*VPVSKA
Trigger: TGCCTTGCTCACAGGGACCCATACTGTGGGTGGTGC...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp AGACCACGGTCACCCGGATTCTTGGCGTCTGTACCACGTCCAGATTCTGGCCACCACTGCTCTGGGCCCTaGCCCCTCGAGCACTCAGAA +
Preference number: 4 (lower is better)
Translates to: RPRSPGFLASVPRPDSGHHCSGP*PLEHSE
Trigger: TTCTGAGTGCTCGAGGGGCCAGGGCCCAGAGCAGTG...GTGGCCAGAATCTGGACGTGGTACAGACGCCAAGAATCCGGGTGACCGTGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp TGTCTCCTGGGCCATCCTGGAAAAGGTGCAGGTTCCTGCCTAGCAGCCGGATTTCTGCTCACACAGGCCTaGCACTGCGCAGATGGGCGG +
Preference number: 4 (lower is better)
Translates to: CLLGHPGKGAGSCLAAGFLLTQA*HCADGR
Trigger: CCGCCCATCTGCGCAGTGCCAGGCCTGTGTGAGCAG...AAATCCGGCTGCTAGGCAGGAACCTGCACCTTTTCCAGGATGGCCCAGGAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACAGGGGCGCTGGGCACTaGGTGGCCACAGCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNRGAGH*VATASA
Trigger: GGCTGAGGCTGTGGCCACCCAGTGCCCAGCGCCCCT...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGTACAGGCCCAGTCAGTaGCTCCACCGAGTGGATGAG +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQYRPSQ*LHRVDE
Trigger: CTCATCCACTCGGTGGAGCCACTGACTGGGCCTGTA...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGGGCAGGCGTGGGGCGTaGGCTGGTCTCACACCGCAG +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPGRRGA*AGLTPQ
Trigger: CTGCGGTGTGAGACCAGCCCACGCCCCACGCCTGCC...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCAGCCACAGGGAGCGTaGCAGGCGTGGGGCGTGGGC +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASQPQGA*QAWGVG
Trigger: GCCCACGCCCCACGCCTGCCACGCTCCCTGTGGCTG...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GGGCCATCCTGGAAAAGGTGCAGGTTCCTGCCTAGCAGCCGGATTTCCCGCTCCGGTCACCCGGATTCTTaGCGTCTGTACCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: GPSWKRCRFLPSSRISRSGHPDS*RLYHVQ
Trigger: CTGGACGTGGTACAGACGCCAAGAATCCGGGTGACC...GGAGCGGGAAATCCGGCTGCTAGGCAGGAACCTGCACCTTTTCCAGGATGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACGTCCTCAGGGTTGAGTaGCTGCAGGGTGGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYVLRVE*LQGGVG
Trigger: GCCGACCCCACCCTGCAGCCACTCAACCCTGAGGAC...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCTTGGCGTCTGTACCACGTCCAGATTCTGGCCACGGACGCATATCTCACGTCCGTCCTCAGGGTTGAGTaGCTGCAGGGTGGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: SWRLYHVQILATDAYLTSVLRVE*LQGGVG
Trigger: GCCGACCCCACCCTGCAGCCACTCAACCCTGAGGAC...GGACGTGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAGACGCCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGCCCCTTATCCACTTaGTGCTTAATCCCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLGPLST*CLIPRK
Trigger: CTTTCGAGGGATTAAGCACCAAGTGGATAAGGGGCC...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGCCTTTGCCTGGGAGATaGTGTCACAGTCTAGGACCT +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGPLPGR*CHSLGP
Trigger: AGGTCCTAGACTGTGACACCATCTCCCAGGCAAAGG...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGCGCCTCCACAGACCCTaGACCTCAGAAGTGACATCC +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQRLHRP*TSEVTS
Trigger: GGATGTCACTTCTGAGGTCCAGGGTCTGTGGAGGCG...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCTCTCAGGGATGGCCTTaGCGCGCTCACGCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKASQGWP*RAHAPR
Trigger: GCGGGGAGCGTGAGCGCGCCAAGGCCATCCCTGAGA...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGTCCCGGCCCAGCTTGTaGTCGGCCAGGGTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPSRPSL*SARVQA
Trigger: CGCCTGCACCCTGGCCGACCACAAGCTGGGCCGGGA...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACTCCCGGCCCAGCTTGTaGTCGGCCAGGGTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYSRPSL*SARVQA
Trigger: CGCCTGCACCCTGGCCGACCACAAGCTGGGCCGGGA...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGCTCCGAATCCCAGTGTaGCCAAGGCCAGTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQLRIPV*PRPVFR
Trigger: CCTGAACACTGGCCTTGGCCACACTGGGATTCGGAG...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGCTTAGACCTAGGATGTaGCAGCAGCAACAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQLRPRM*QQQQGQ
Trigger: CTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAG...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCAGCCTCTCCCCGGGTCTaGCGGAGCCGCAGCTGTTAC +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSASPRV*RSRSCY
Trigger: GTAACAGCTGCGGCTCCGCCAGACCCGGGGAGAGGC...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358536.8
CDS-3UTR TCA 90 bp GTCTCCAACCACCACTCGGATGTCCTCCAGCCGCCCAGTCAGGAGCTTGGAGCCGTGTGCTCTGGGTCATaGCATACAGGTGCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: VSNHHSDVLQPPSQELGAVCSGS*HTGAQR
Trigger: CCTTTGAGCACCTGTATGTCATGACCCAGAGCACAC...GGCTCCAAGCTCCTGACTGGGCGGCTGGAGGACATCCGAGTGGTGGTTGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp TGCTGGCAGGTGACATGGCACTGGGTATCTGGAGGTGGCTCACACTCGACCCGGCAACAGCGCCAAATCTaGGCTCCACGCTCACGGATA +
Preference number: 4 (lower is better)
Translates to: CWQVTWHWVSGGGSHSTRQQRQI*APRSRI
Trigger: TATCCGTGAGCGTGGAGCTCAGATTTGGCGCTGTTG...CCGGGTCGAGTGTGAGCCACCTCCAGATACCCAGTGCCATGTCACCTGCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCGCACTCCAGCCACCGTaGCCATGCCCAGCACATCCT +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSALQPP*PCPAHP
Trigger: AGGATGTGCTGGGCATGGTCACGGTGGCTGGAGTGC...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCCCACTGGCCCCGGTaGTGCACACGAGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASPHWPR*CTRGCW
Trigger: CCAGCAGCCTCGTGTGCATCACCGGGGCCAGTGGGG...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp GCACGTGATGAGCTGGGAGGAGTTGACATGGCACGGCTCCTCAAATTGCTGGCTTTGAACTGTCCGCGTTaGAGCCTCCGCTCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: ARDELGGVDMARLLKLLALNCPR*SLRSVA
Trigger: GGCCACGGAGCGGAGGCTTCAACGCGGACAGTTCAA...AGCCAGCAATTTGAGGAGCCGTGCCATGTCAACTCCTCCCAGCTCATCACGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGCCAGGAGGTCACTGGTaGGATCGGTCATCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQPGGHW*DRSSQS
Trigger: TGACTGAGATGACCGATCTCACCAGTGACCTCCTGG...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCAGGCACGGTCCCGAGCTaGAAAGGTGCGCTGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSGTVPS*KGALAL
Trigger: GAGAGCCAGCGCACCTTTTCAGCTCGGGACCGTGCC...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCGGAGCACATGCTTGGTaGGGCAGGGGACGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKAGAHAW*GRGRGP
Trigger: TGGCCCTCGTCCCCTGCCTCACCAAGCATGTGCTCC...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGCTGGGACAGTCTGTCTaGTGTCTGCATAGTACCTTT +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLLGQSV*CLHSTF
Trigger: AAAGGTACTATGCAGACATCAGACAGACTGTCCCAG...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCCTACCCCATGAGCCTTaGGGCCCCGGGTCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKALPHEP*GPGSRR
Trigger: CCTCCTAGACCCGGGGCCTCAAGGCTCATGGGGTAG...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGGTCCCTTGCCAGGTaGTGCAGATACGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPGSLAR*CRYVPL
Trigger: CAATGGCACGTATCTGCAGCACCTGGCAAGGGACCC...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCGTGGCAGGCAGTCCCTaGTGTCTAGCACAGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFVAGSP*CLAQGR
Trigger: CCGGCCCTGTGCTAGACAGCAGGGACTGCCTGCCAC...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCAGGAGAGGCGGCCCACTaGCAGCTTGGCTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSGEAAH*QLGCLL
Trigger: GAGGAGACAGCCAAGCTGGCAGTGGGCCGCCTCTCC...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACGGCAGAGGCTCCAGATaGCCCAGCAGCCGCCGATGG +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYGRGSR*PSSRRW
Trigger: CCATCGGCGGCTGCTGGGGCATCTGGAGCCTCTGCC...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TGCTGGCAGGTGACATGGCACTGGGTATCTGGAGGTGGCTCACACTCGACCCGGCAGACCCCTGCTGGATaGTCTGTGTGGAGTATGGGT +
Preference number: 4 (lower is better)
Translates to: CWQVTWHWVSGGGSHSTRQTPAG*SVWSMG
Trigger: ACCCATACTCCACACAGAGCATCCAGCAGGGGTCTG...CCGGGTCGAGTGTGAGCCACCTCCAGATACCCAGTGCCATGTCACCTGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp TTCTCCCCCTCCACGGAGAACACACTCCCAGGCTTGTGCCGGAATGGCATGGTGGAGGTCTCTGCTCACTaGAGACCCCTGCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: FSPSTENTLPGLCRNGMVEVSAH*RPLLDA
Trigger: AGCATCCAGCAGGGGTCTGCAGTGAGCAGAGACCTC...CACCATGCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAAGCTCCATAGCCACTaGTCTGGGCCCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYKLHSH*SGPWPL
Trigger: GAGGGGCCAGGGCCCAGAGCAGTGGCTATGGAGCTT...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp GCGGGCCGGGAAGATGGAATGGACCTTCGGATCCTGGTAGGCAAAGTCGTGTTCGGCAGGACTCATGGCTaGCACTTGCAGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: AGREDGMDLRILVGKVVFGRTHG*HLQTAQ
Trigger: CTGGGCTGTCTGCAAGTGGCAGCCATGAGTCCTGCC...GAACACGACTTTGCCTACCAGGATCCGAAGGTCCATTCCATCTTCCCGGCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp TGTCTCCTGGGCCATCCTGGAAAAGGTGCAGGTTCCTGCCTAGCAGCCGGATTTTACACCCCCAGCGGCTaGTCACACAGGCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: CLLGHPGKGAGSCLAAGFYTPSG*SHRPGT
Trigger: AGTGCCAGGCCTGTGTGAGCAGCCGCTGGGGGTGTA...AAATCCGGCTGCTAGGCAGGAACCTGCACCTTTTCCAGGATGGCCCAGGAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTAGCCCCTGGCTGGGCTaGAGCATTCTCGAGACCACG +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSSPWLG*SILETT
Trigger: CGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCT...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTTCTCGGAGGGCATGGTaGCGTGGCAGGGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSSRRAW*RGRGCS
Trigger: GGAGCAGCCCCTGCCACGGCACCATGCCCTCCGAGA...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAAGGCAAAGAGTCAGGTaGCTCTCGGAGGGCATGGTG +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPRQRVR*LSEGMV
Trigger: CACCATGCCCTCCGAGAGGCACCTGACTCTTTGCCT...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTACACCCAGGTCCCGGTaGAAGGGCGACTCGCGGTGC +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSTPRSR*KGDSRC
Trigger: GCACCGCGAGTCGCCCTTGCACCGGGACCTGGGTGT...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTGGTGCCAGGGCCGGATaGCCCCCTCATCTACATCCT +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSGARAG*PPHLHP
Trigger: AGGATGTAGATGAGGGGGGCATCCGGCCCTGGCACC...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCACCATGCTGCTGGGCCTaGTCATCCAGCAGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPPCCWA*SSSRSK
Trigger: CTTTGACCTGCTGGATGAGCAGGCCCAGCAGCATGG...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGGTTTTCCACAGCAGCTaGAATCTGCTGGAGCCGATA +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQVFHSS*NLLEPI
Trigger: TATCGGCTCCAGCAGATTGCAGCTGCTGTGGAAAAC...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCGCAGGCATGGTCACCTaGCAGGGCCGGCTGGATCAG +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFAGMVT*QGRLDQ
Trigger: CTGATCCAGCCGGCCCTGCCAGGTGACCATGCCTGC...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCAGAGGGTGCCTGAGGTaGGGTCCCTTGCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSRGCLR*GPLPGA
Trigger: AGCACCTGGCAAGGGACCCCACCTCAGGCACCCTCT...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAAGCCCAGGGCTCAGCTaGAACAGGAAGTTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPSPGLS*NRKLVA
Trigger: GGCTACCAACTTCCTGTTCCAGCTGAGCCCTGGGCT...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CGCAAGTTCCCCATCTGCACCGTGAACTCAGGCAAAGAGTCAGGTGCCTCTCGGGCACTCACGAAGTGGTaGCTGTACTCGGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RKFPICTVNSGKESGASRALTKW*LYSERR
Trigger: CCGCCTCTCCGAGTACAGCCACCACTTCGTGAGTGC...CCGAGAGGCACCTGACTCTTTGCCTGAGTTCACGGTGCAGATGGGGAACTTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCCATGCGCCACCTCCCTaGACGTGGCCACAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKAHAPPP*TWPQLQ
Trigger: CTGCAGCTGTGGCCACGTCCAGGGAGGTGGCGCATG...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCATGGCCACTCCAGAATTaGTGTGGCTTCCAGCGGGAC +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPWPLQN*CGFQRD
Trigger: GTCCCGCTGGAAGCCACACCAATTCTGGAGTGGCCA...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTTGTGTGGAGTATGGGTaGCCATCGCTCCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSCVEYG*PSLPGP
Trigger: GGGCCCAGGGAGCGATGGCCACCCATACTCCACACA...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTTCCTCTCGGCAGCACTaGGGCCTCACTAGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSSSRQH*GLTRVW
Trigger: CCAGACCCTAGTGAGGCCCCAGTGCTGCCGAGAGGA...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGAAGAGAGGGAAGTTTTaGCGATCACAACAGCGCCAA +
Preference number: 4 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLKRGKF*RSQQRQ
Trigger: TTGGCGCTGTTGTGATCGCCAAAACTTCCCTCTCTT...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GGACCACGCGACGCCTCCGTCCAAGCCCCTGGCTGGGCTGCAGCATTCTCGAGAAAGAGAGGGAAGTTTTaGCGATCACAACAGCGCCAA +
Preference number: 4 (lower is better)
Translates to: GPRDASVQAPGWAAAFSRKRGKF*RSQQRQ
Trigger: TTGGCGCTGTTGTGATCGCCAAAACTTCCCTCTCTT...TCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGGCGTCGCGTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACCTGGCACTGCGCAGATaGGCGGAGTTCAGTGACCGC +
Preference number: 4 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYLALRR*AEFSDR
Trigger: GCGGTCACTGAACTCCGCCCATCTGCGCAGTGCCAG...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TGTCTCCTGGGCCATCCTGGAAAAGGTGCAGGTTCCTGCCTAGCAGCCGGATTTCTGGCACTGCGCAGATaGGCGGAGTTCAGTGACCGC +
Preference number: 4 (lower is better)
Translates to: CLLGHPGKGAGSCLAAGFLALRR*AEFSDR
Trigger: GCGGTCACTGAACTCCGCCCATCTGCGCAGTGCCAG...AAATCCGGCTGCTAGGCAGGAACCTGCACCTTTTCCAGGATGGCCCAGGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTGCTCACACAGGCCTaGCACTGCGCAGATGGGCGG +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSLLTQA*HCADGR
Trigger: CCGCCCATCTGCGCAGTGCCAGGCCTGTGTGAGCAG...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCCCGAAGCTGTGGCTGTaGAGGGAGCCCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKAPKLWL*REPQAP
Trigger: TGGAGCCTGGGGCTCCCTCCACAGCCACAGCTTCGG...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACGCCAGAACCTGCCCATaGCCCCCAGGGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNARTCP*PPGAEQ
Trigger: CTGCTCAGCCCCTGGGGGCCATGGGCAGGTTCTGGC...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCGGGGAGGGCTCCTCATaGAGAGGCGACCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKAGEGSS*RGDPVE
Trigger: CTCCACAGGGTCGCCTCTCCATGAGGAGCCCTCCCC...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCATGGTGGCAGGAACAGTaGCAGGGGGCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSWWQEQ*QGAGPG
Trigger: CCCTGGACCTGCCCCCTGCCACTGTTCCTGCCACCA...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTCCCCTGGGAAAGTGGTaGCAGGAACAGTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSPLGKW*QEQWQG
Trigger: CCCCTGCCACTGTTCCTGCCACCACTTTCCCAGGGG...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCTCCAACCACCACTCGGATGTCCTCCAGCCGCCCAGTCAGGAGCTTGGAGCCATCTCCTGGGCCATCCTaGAAAAGGTGCAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SPTTTRMSSSRPVRSLEPSPGPS*KRCRFL
Trigger: CAGGAACCTGCACCTTTTCCAGGATGGCCCAGGAGA...TGGCTCCAAGCTCCTGACTGGGCGGCTGGAGGACATCCGAGTGGTGGTTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCCTGGGTATCTGGAGGTaGCTCACACTCGACCCGGGC +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSLGIWR*LTLDPG
Trigger: GCCCGGGTCGAGTGTGAGCCACCTCCAGATACCCAG...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp ACCACCACTCGGATGTCCTCCAGCCGCCCAGTCAGGAGCTTGGAGCCATTCAGGATGGCACTGGGTATCTaGAGGTGGCTCACACTCGAC +
Preference number: 4 (lower is better)
Translates to: TTTRMSSSRPVRSLEPFRMALGI*RWLTLD
Trigger: GTCGAGTGTGAGCCACCTCCAGATACCCAGTGCCAT...CCTGAATGGCTCCAAGCTCCTGACTGGGCGGCTGGAGGACATCCGAGTGGTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp GGCGTCTGTACCACGTCCAGATTCTGGCCACGGACGCATATCTCACGTCCTCCAGAGACCTCGTACTCCTaGGCATCCACAGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: GVCTTSRFWPRTHISRPPETSYS*ASTAQG
Trigger: GCCCTGTGCTGTGGATGCCCAGGAGTACGAGGTCTC...TGGAGGACGTGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAGACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp TCTCCAACCACCACTCGGATGTCCTCCAGCCGCCCAGTCAGGAGCTTGGAGCCAGGCTCCTCAAATTGCTaGCTACTGCAGGAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SPTTTRMSSSRPVRSLEPGSSNC*LLQEGP
Trigger: TGGACCCTCCTGCAGTAGCCAGCAATTTGAGGAGCC...TGGCTCCAAGCTCCTGACTGGGCGGCTGGAGGACATCCGAGTGGTGGTTGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCGTCCTCAGGGTTGAGTaGCTGCAGGGTGGGGTCGGC +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKAVLRVE*LQGGVG
Trigger: GCCGACCCCACCCTGCAGCCACTCAACCCTGAGGAC...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTGCCCTTGCTCCACAGTaGGCCGTCTGCTCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSALAPQ*AVCSQA
Trigger: TGCCTGAGAGCAGACGGCCCACTGTGGAGCAAGGGC...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGGGCCCCTTATCCACTTaGTGCTTAATCCCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGGPLST*CLIPRK
Trigger: CTTTCGAGGGATTAAGCACCAAGTGGATAAGGGGCC...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCAAGGGTGCGAGGGTCTaGCCGCTGGGTGAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFKGARV*PLGERH
Trigger: GTGCCTCTCACCCAGCGGCCAGACCCTCGCACCCTT...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCACTCCGAATCCCAGTGTaGCCAAGGCCAGTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPLRIPV*PRPVFR
Trigger: CCTGAACACTGGCCTTGGCCACACTGGGATTCGGAG...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGGAAAAGCTGGGTCAATaGAGTCACCACTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGEKLGQ*SHHSPQ
Trigger: TTGGGGAGAGTGGTGACTCCATTGACCCAGCTTTTC...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
3UTR CAA 72 bp CTCACACCACACACAGCCATACTGGGGCATGGCAGTTaGGCAGCGGCTGCAGTCTCCATGTCCCACGGAACA +
Preference number: 4 (lower is better)
Translates to: LTPHTAILGHGS*AAAAVSMSHGT
Trigger: TGTTCCGTGGGACATGGAGACTGCAGCCGCTGCCAAACTGCCATGCCCCAGTATGGCTGTGTGTGGTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CAA 72 bp GCTGCAGCATTCTCGAGACCACGGTCACCCGGATTCTaGGCGTCTGTACCACGTCCAGATTCTGGCCACGGA +
Preference number: 4 (lower is better)
Translates to: AAAFSRPRSPGF*ASVPRPDSGHG
Trigger: TCCGTGGCCAGAATCTGGACGTGGTACAGACGCCAAGAATCCGGGTGACCGTGGTCTCGAGAATGCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CAA 72 bp AGGGCAGGTGTGCGGCACGTGATGAGCTGGGAGGAGTaGACATGGCACGGCTCCTCAAATTGCTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: RAGVRHVMSWEE*TWHGSSNCWLL
Trigger: CAGTAGCCAGCAATTTGAGGAGCCGTGCCATGTCAACTCCTCCCAGCTCATCACGTGCCGCACACCTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAACGTGCCATTGGGAGTaGATGCAGTTGGTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPTCHWE*MQLVEG
Trigger: CCCTTCCACCAACTGCATTCACTCCCAATGGCACGT...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACCAGGTAGAGGGTGCCTaGGGTGGGGTCCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNQVEGA*GGVPCQ
Trigger: CTGGCAAGGGACCCCACCTCAGGCACCCTCTACCTG...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTCAGGTAGAGGGTGCCTaGGGTGGGGTCCCTTGCCAG +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSQVEGA*GGVPCQ
Trigger: CTGGCAAGGGACCCCACCTCAGGCACCCTCTACCTG...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCCGAAAAGCTCTAGACTaGGCCTGCAGGTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKARKALD*ACRSRR
Trigger: GCGGCGGGACCTGCAGGCTCAGTCTAGAGCTTTTCG...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGGTGTGCTCTGGGTCATaGCATACAGGTGCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQVCSGS*HTGAQR
Trigger: CCTTTGAGCACCTGTATGTCATGACCCAGAGCACAC...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTAGGGGCACTGTGGGATaGAGAGCCTCGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASRGTVG*RASGPG
Trigger: CCCTGGCCCCGAGGCTCTTCATCCCACAGTGCCCCT...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTTGGAGCCATTCAGGGTaGGACGGGTGCCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSWSHSG*DGCPQL
Trigger: GAGCTGGGGGCACCCGTCTCACCCTGAATGGCTCCA...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGTGGAGCCATTCAGGGTaGGACGGGTGCCCCCAGCTC +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPWSHSG*DGCPQL
Trigger: GAGCTGGGGGCACCCGTCTCACCCTGAATGGCTCCA...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCCATGCAGTGCCACGGTaGGCAGAGATGCCACGTAGG +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSHAVPR*AEMPRR
Trigger: CCTACGTGGCATCTCTGCTCACCGTGGCACTGCATG...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAACTCCACATCCTCTCTaGGCAGGCGGTTGTCGTTCA +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPTPHPL*AGGCRS
Trigger: TGAACGACAACCGCCTGCTCAGAGAGGATGTGGAGT...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCCGGGGCGGCTGGTGCTaGGAATCACCTGGAACAGGT +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKARGGWC*ESPGTG
Trigger: ACCTGTTCCAGGTGATTCTCAGCACCAGCCGCCCCG...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCACATACAGAAGTTTGTTaGTCGGGGAGTCCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPHTEVC*SGSPGP
Trigger: TGGGCCGGGACTCCCCGATCAACAAACTTCTGTATG...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCACCATGGCTACCTATaGGGCAGGGCAGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFHHGYL*GRAALW
Trigger: CCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTG...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACACCATGGCTACCTATaGGGCAGGGCAGCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSHHGYL*GRAALW
Trigger: CCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTG...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACGCCTTGTTTCTCCCCTaGGCACCTGGCCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNALFLP*APGPAH
Trigger: GTGGGCAGGGCCAGGTGCGCAGGGGAGAAACAAGGC...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296440.11
CDS-3UTR GCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGCCATTGGGAGTGAATaGAGTTGGTGGAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPAIGSE*SWWKGL
Trigger: CAGCCCCTTCCACCAACTGCATTCACTCCCAATGGC...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TTCTCCCCCTCCACGGAGAACACACTCCCAGGCTTGTGCCGGAATGGCATGGTGGCCATTGGGAGTGAATaGAGTTGGTGGAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: FSPSTENTLPGLCRNGMVAIGSE*SWWKGL
Trigger: CAGCCCCTTCCACCAACTGCATTCACTCCCAATGGC...CACCATGCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp GCACGGCTCCTCAAATTGCTGGCTACTGCAGGAGGGTCCAAGGGAACATGCCGTGGGTCCCTTGCCAGGTaGTGCAGATACGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: ARLLKLLATAGGSKGTCRGSLAR*CRYVPL
Trigger: CAATGGCACGTATCTGCAGCACCTGGCAAGGGACCC...ACGGCATGTTCCCTTGGACCCTCCTGCAGTAGCCAGCAATTTGAGGAGCCGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCGGCGCTGGCCCCACGTaGAAAGGCACTCACGAAGTG +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKAGAGPT*KGTHEV
Trigger: CACTTCGTGAGTGCCTTTGCACGTGGGGCCAGCGCC...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp GTGATGCACACGAGGCTGCTGGAGACCTCGTACTCCTGGGCATCCACAGCACAGGTGAGCAAGGCAAGATaGACAGTCCAGGTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: VMHTRLLETSYSWASTAQVSKAR*TVQVLS
Trigger: GCTCAGCACCTGGACTGTGCATCTTGCCTTGCTCAC...CTGTGCTGTGGATGCCCAGGAGTACGAGGTCTCCAGCAGCCTCGTGTGCATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp GGGCCATCCTGGAAAAGGTGCAGGTTCCTGCCTAGCAGCCGGATTTCCCGCTCCTTGTGGGTGCACAGGTaGTGCCAGACACACCAGTTA +
Preference number: 4 (lower is better)
Translates to: GPSWKRCRFLPSSRISRSLWVHR*CQTHQL
Trigger: TAACTGGTGTGTCTGGCAGCACCTGTGCACCCACAA...GGAGCGGGAAATCCGGCTGCTAGGCAGGAACCTGCACCTTTTCCAGGATGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTCGGGCTCTGATGGCTTaGAACCATGGGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSRALMA*NHGPSI
Trigger: GATGCTGGGCCCATGGTTGCAAGCCATCAGAGCCCG...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAAAAGGTGCAGGTTCCTaGCTAGCAGCCGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPKGAGS*LAAGFP
Trigger: GGGAAATCCGGCTGCTAGGCAGGAACCTGCACCTTT...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TGTCTCCTGGGCCATCCTGGAAAAGGTGCAGGTTCCTGCCTAGCAGCCGGATTTCAGTTTGGCAGCGGCTaGAGTCTCCATGTCCCACGG +
Preference number: 4 (lower is better)
Translates to: CLLGHPGKGAGSCLAAGFQFGSG*SLHVPR
Trigger: CCGTGGGACATGGAGACTGCAGCCGCTGCCAAACTG...AAATCCGGCTGCTAGGCAGGAACCTGCACCTTTTCCAGGATGGCCCAGGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp TGCTGGCAGGTGACATGGCACTGGGTATCTGGAGGTGGCTCACACTCGACCCGGCAAATTGCTGGCTACTaGAGGAGGGTCCAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: CWQVTWHWVSGGGSHSTRQIAGY*RRVQGN
Trigger: GTTCCCTTGGACCCTCCTGCAGTAGCCAGCAATTTG...CCGGGTCGAGTGTGAGCCACCTCCAGATACCCAGTGCCATGTCACCTGCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACAAGCCCACCTGGGCTaGCACAGGAAAAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSQAHLG*HRKSPR
Trigger: CCTGGGGCTTTTCCTGTGGCAGCCCAGGTGGGCTTG...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAAGGGCGACTCGCGGTaGCCAGGGAAGAAGATCCTC +
Preference number: 4 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYKGDSR*PGKKIL
Trigger: GAGGATCTTCTTCCCTGGGCACCGCGAGTCGCCCTT...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCCACAGTGGGCCGTCTaGTCTCAGGCACACCCAGGT +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFPQWAV*SQAHPG
Trigger: ACCTGGGTGTGCCTGAGAGCAGACGGCCCACTGTGG...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCCCCGAGCTGAAAAGGTaGGCTGGCTCTCCAGCGTGT +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSPELKR*AGSPAC
Trigger: ACACGCTGGAGAGCCAGCGCACCTTTTCAGCTCGGG...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCCACGGTGAGCAGAGATaGCACGTAGGCACGGTCCCG +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKAHGEQR*HVGTVP
Trigger: CGGGACCGTGCCTACGTGGCATCTCTGCTCACCGTG...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAAAGCTTCCCATGCAGTaGCACGGTGAGCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPKLPMQ*HGEQRC
Trigger: GCATCTCTGCTCACCGTGGCACTGCATGGGAAGCTT...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCAGGTGCCAGGGCCGGATaGCCCCCTCATCTACATCCT +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSGARAG*PPHLHP
Trigger: AGGATGTAGATGAGGGGGGCATCCGGCCCTGGCACC...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACTCGGAGATGCCATGCTaGTGGGCCTGCTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYSEMPC*WACSSS
Trigger: GCTGGATGAGCAGGCCCAGCAGCATGGCATCTCCGA...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTACCGGGGAATGTCCCGTaGATACAGAAGTTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVPGNVP*IQKFVD
Trigger: ATCAACAAACTTCTGTATGCACGGGACATTCCCCGG...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACGCAGGCATGGTCACCTaGCAGGGCCGGCTGGATCAG +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNAGMVT*QGRLDQ
Trigger: CTGATCCAGCCGGCCCTGCCAGGTGACCATGCCTGC...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTAGCACAGGGCCGGTaGACACTGTGGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSLAQGR*TLWPPA
Trigger: AGCTGGAGGCCACAGTGTCCACCGGCCCTGTGCTAG...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACTTGGTAGGCTGGGCCTaGGGGCACTCATCAGGCATC +
Preference number: 4 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYLVGWA*GHSSGI
Trigger: GATGCCTGATGAGTGCCCCCAGGCCCAGCCTACCAA...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GAACAGTCATACAGTACCACATGCAGCCCCTCAGCACTGTCCACACGCAGACGGACAGGAAGTAGGCGCTaGCCCCACGTGCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: EQSYSTTCSPSALSTRRRTGSRR*PHVQRH
Trigger: GTGCCTTTGCACGTGGGGCCAGCGCCTACTTCCTGT...CCGTCTGCGTGTGGACAGTGCTGAGGGGCTGCATGTGGTACTGTATGACTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACCATGCGCCACCTCCCTaGACGTGGCCACAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNHAPPP*TWPQLQ
Trigger: CTGCAGCTGTGGCCACGTCCAGGGAGGTGGCGCATG...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCTGTGTGGAGTATGGGTaGCCATCGCTCCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFCVEYG*PSLPGP
Trigger: GGGCCCAGGGAGCGATGGCCACCCATACTCCACACA...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCGCTCTGTGTGGAGTATaGGTGGCCATCGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSALCGV*VAIAPW
Trigger: CCAGGGAGCGATGGCCACCCATACTCCACACAGAGC...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GCAGCGGCTGCAGTCTCCATGTCCCACGGAACAGTCATACAGTACCACATGCAGGCTCTGTGTGGAGTATaGGTGGCCATCGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: AAAAVSMSHGTVIQYHMQALCGV*VAIAPW
Trigger: CCAGGGAGCGATGGCCACCCATACTCCACACAGAGC...CTGCATGTGGTACTGTATGACTGTTCCGTGGGACATGGAGACTGCAGCCGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTGGCACTGCGCAGATaGGCGGAGTTCAGTGACCGC +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSLALRR*AEFSDR
Trigger: GCGGTCACTGAACTCCGCCCATCTGCGCAGTGCCAG...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACCTGCTCACACAGGCCTaGCACTGCGCAGATGGGCGG +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNLLTQA*HCADGR
Trigger: CCGCCCATCTGCGCAGTGCCAGGCCTGTGTGAGCAG...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAAGCCAGGGGAAGATATaGAGCCAGAACCTGCCCATG +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPSQGKI*SQNLPM
Trigger: CATGGGCAGGTTCTGGCTCCATATCTTCCCCTGGCT...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCGGAGAGGCGACCCTGTaGAGCCAGGGGAAGATATGG +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSGEATL*SQGKIW
Trigger: CCATATCTTCCCCTGGCTCCACAGGGTCGCCTCTCC...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGGGGGAGGGCTCCTCATaGAGAGGCGACCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPGEGSS*RGDPVE
Trigger: CTCCACAGGGTCGCCTCTCCATGAGGAGCCCTCCCC...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACTGGTGGCAGGAACAGTaGCAGGGGGCAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYWWQEQ*QGAGPG
Trigger: CCCTGGACCTGCCCCCTGCCACTGTTCCTGCCACCA...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCCCCCTGGGAAAGTGGTaGCAGGAACAGTGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKAPLGKW*QEQWQG
Trigger: CCCCTGCCACTGTTCCTGCCACCACTTTCCCAGGGG...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GCAAAGTCGTGTTCTGAGACACCACGTCCTCTTCCCGGCACCTCCACCGCTGTGCAGGTGACATGGCACTaGGTATCTGGAGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: AKSCSETPRPLPGTSTAVQVTWH*VSGGGS
Trigger: TGAGCCACCTCCAGATACCCAGTGCCATGTCACCTG...CACAGCGGTGGAGGTGCCGGGAAGAGGACGTGGTGTCTCAGAACACGACTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCCTGAGCTGGTGCTGCTaGCAGGTGACATGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSLSWCC*QVTWHW
Trigger: CCAGTGCCATGTCACCTGCCAGCAGCACCAGCTCAG...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTAGCCATACTGGGGCATaGCAGTTTGGCAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSSHTGA*QFGSGC
Trigger: GCAGCCGCTGCCAAACTGCCATGCCCCAGTATGGCT...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCAGCCATACTGGGGCATaGCAGTTTGGCAGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSSHTGA*QFGSGC
Trigger: GCAGCCGCTGCCAAACTGCCATGCCCCAGTATGGCT...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACAGTGGCTCCACCGAGTaGATGAGGGGCGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYSGSTE*MRGAGH
Trigger: GTGCCCAGCGCCCCTCATCCACTCGGTGGAGCCACT...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTGCACACGAGGCTGCTaGAGACCTCGTACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSCTRGC*RPRTPG
Trigger: CCCAGGAGTACGAGGTCTCCAGCAGCCTCGTGTGCA...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCCGCGGGCCGGGAAGATaGAATGGACCTTCGGATCCT +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSRGPGR*NGPSDP
Trigger: AGGATCCGAAGGTCCATTCCATCTTCCCGGCCCGCG...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TTGGTGGGGCCAGCAGAGGTGATGTTGGGGTCCAAGGTATACTTGAACTGTCCGGCGTGGGGCGTGGGCTaGTCTCACACCGCAGTTGTT +
Preference number: 4 (lower is better)
Translates to: LVGPAEVMLGSKVYLNCPAWGVG*SHTAVV
Trigger: AACAACTGCGGTGTGAGACCAGCCCACGCCCCACGC...CGGACAGTTCAAGTATACCTTGGACCCCAACATCACCTCTGCTGGCCCCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCGAAGCCTCCGCTCCGTaGCCCCAAACCACACAGCCA +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFEASAP*PQTTQP
Trigger: TGGCTGTGTGGTTTGGGGCCACGGAGCGGAGGCTTC...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGTGGGAGGAGTTGACATaGCACGGCTCCTCAAATTGC +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQWEELT*HGSSNC
Trigger: GCAATTTGAGGAGCCGTGCCATGTCAACTCCTCCCA...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCGGTGATGCACACGAGGCTGCTGGAGACCTCGTACTCCTGGGCATCCACAGCATGGGAGGAGTTGACATaGCACGGCTCCTCAAATTGC +
Preference number: 4 (lower is better)
Translates to: PVMHTRLLETSYSWASTAWEELT*HGSSNC
Trigger: GCAATTTGAGGAGCCGTGCCATGTCAACTCCTCCCA...TGCTGTGGATGCCCAGGAGTACGAGGTCTCCAGCAGCCTCGTGTGCATCACCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTAGGCTTGTGCCGGAATaGCATGGTGGGGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSRLVPE*HGGVLR
Trigger: CCTGAGGACCCCACCATGCCATTCCGGCACAAGCCT...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGTGGCTCTCCAGCGTGTaGATGAACTTGGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQWLSSV*MNLVRK
Trigger: CTTCCTCACCAAGTTCATCCACACGCTGGAGAGCCA...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGTTCTTGGCCACATACTaGGCAACCAGGTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQFLATY*ATRSLS
Trigger: GCTCAGTGACCTGGTTGCCCAGTATGTGGCCAAGAA...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCGCAGGGTGCCCTTCATaGACAGCAGGCGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFAGCPS*TAGGSG
Trigger: ACCTGACCCGCCTGCTGTCCATGAAGGGCACCCTGC...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCGAGATGCCATGCTGCTaGGCCTGCTCATCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSEMPCC*ACSSSR
Trigger: CCTGCTGGATGAGCAGGCCCAGCAGCATGGCATCTC...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCACTTCCAGCCACTCTCTaGAAGCCCTTAGTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPLPATL*KPLVPN
Trigger: GTTGGGGACTAAGGGCTTCCAGAGAGTGGCTGGAAG...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCGTCTCCCCAGGGGCCTaGAGTCTCTTCCAGCCACTC +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKAVSPGA*SLFQPL
Trigger: GAGTGGCTGGAAGAGACTCCAGGCCCCTGGGGAGAC...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCCAGGAGACAACAGCATaGCCCGTGTGGGAGTCACCT +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSQETTA*PVWESP
Trigger: AGGTGACTCCCACACGGGTCATGCTGTTGTCTCCTG...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296440.11
CDS-3UTR TCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTCTCACCAGGAGCAGCTaGTTCGGGTTGTTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSLTRSS*FGLLVG
Trigger: GCCTACCAACAACCCGAATCAGCTGCTCCTGGTGAG...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCGCACAGTCCAGGTGCTaGGCACAGGAAGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKAAQSRC*AQEATG
Trigger: TCCTGTGGCTTCCTGTGCTCAGCACCTGGACTGTGC...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp GCAGCGGCTGCAGTCTCCATGTCCCACGGAACAGTCATACAGTACCACATGCAGTCGTCTCCTCTCGGCTaGTGTTGGCAGGACTCATGG +
Preference number: 4 (lower is better)
Translates to: AAAAVSMSHGTVIQYHMQSSPLG*CWQDSW
Trigger: CCATGAGTCCTGCCAACATCAGCCGAGAGGAGACGA...CTGCATGTGGTACTGTATGACTGTTCCGTGGGACATGGAGACTGCAGCCGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACGTGTGGCTGAGGGTCTaGAGTCAGTGGGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNVWLRV*SQWGQG
Trigger: TCCCTGCCCCCACTGACTTCAGACCCTCAGCCACAC...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCAGTCCTCAGGTGTGGCTaGGGGTCTGAAGTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSVLRCG*GSEVSG
Trigger: CCCACTGACTTCAGACCCTCAGCCACACCTGAGGAC...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCGTCCTCAGGTGTGGCTaGGGGTCTGAAGTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKAVLRCG*GSEVSG
Trigger: CCCACTGACTTCAGACCCTCAGCCACACCTGAGGAC...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGGCACTCCAGCCACCGTaGCCATGCCCAGCACATCCT +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPALQPP*PCPAHP
Trigger: AGGATGTGCTGGGCATGGTCACGGTGGCTGGAGTGC...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp TTGGTGGGGCCAGCAGAGGTGATGTTGGGGTCCAAGGTATACTTGAACTGTCCGTGCTCCGGCAGCAAGTaGCAAGGCTGGTCTCCAACC +
Preference number: 4 (lower is better)
Translates to: LVGPAEVMLGSKVYLNCPCSGSK*QGWSPT
Trigger: GGTTGGAGACCAGCCTTGTCACTTGCTGCCGGAGCA...CGGACAGTTCAAGTATACCTTGGACCCCAACATCACCTCTGCTGGCCCCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTGGAGCACATGCTTGGTaGGGCAGGGGACGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASGAHAW*GRGRGP
Trigger: TGGCCCTCGTCCCCTGCCTCACCAAGCATGTGCTCC...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACCAGGAGACAACAGCATaGCCCGTGTGGGAGTCACCA +
Preference number: 4 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYQETTA*PVWESP
Trigger: TGGTGACTCCCACACGGGTCATGCTGTTGTCTCCTG...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358536.8
CDS-3UTR GCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCGGGTCCCTTGCCAGGTaGTGCAGATACGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSGSLAR*CRYVPL
Trigger: CAATGGCACGTATCTGCAGCACCTGGCAAGGGACCC...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGTCACAGACCCCCTGGTaGACGCTCCCGCATACCACC +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPSQTPW*TLPHTT
Trigger: GGTGGTATGCGGGAGCGTGCACCAGGGGGTCTGTGA...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACTCACAGACCCCCTGGTaGACGCTCCCGCATACCACC +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYSQTPW*TLPHTT
Trigger: GGTGGTATGCGGGAGCGTGCACCAGGGGGTCTGTGA...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACGGACGTGGCCACAGCTaGAGCCTGGATCAGCCCGTA +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNGRGHS*SLDQPV
Trigger: TACGGGCTGATCCAGGCTGCAGCTGTGGCCACGTCC...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTAAGAGCACCTCCCCATaGGCCACCTCCCTGGACGTG +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSKSTSP*ATSLDV
Trigger: CACGTCCAGGGAGGTGGCGCATGGGGAGGTGCTCTT...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAACGGCGACTGCACCTaGCAAGGAGCACGCACCACC +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPNGDCT*QGARTT
Trigger: GGTGGTGCGTGCTCCTTGGCAGGTGCAGTCGCCGTT...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCGGCAGGACTCATGGCTaGCACTTGCAGACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFGRTHG*HLQTAQ
Trigger: CTGGGCTGTCTGCAAGTGGCAGCCATGAGTCCTGCC...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TTGGTGGGGCCAGCAGAGGTGATGTTGGGGTCCAAGGTATACTTGAACTGTCCGACGAGGCCTTGTGGGTaGACAGGTGCTGCCAGACAC +
Preference number: 4 (lower is better)
Translates to: LVGPAEVMLGSKVYLNCPTRPCG*TGAARH
Trigger: GTGTCTGGCAGCACCTGTGCACCCACAAGGCCTCGT...CGGACAGTTCAAGTATACCTTGGACCCCAACATCACCTCTGCTGGCCCCACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTGCTGGGTCCACCTCTTaGAGGAGGGTCTGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSAGSTS*RRVWGD
Trigger: GTCTCCCCAGACCCTCCTGCAAGAGGTGGACCCAGC...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACGCTGGGTCCACCTCTTaGAGGAGGGTCTGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYAGSTS*RRVWGD
Trigger: GTCTCCCCAGACCCTCCTGCAAGAGGTGGACCCAGC...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACTATGGAGCCAGAACCTaGCCATGGCCCCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNYGART*PWPPGA
Trigger: AGCCCCTGGGGGCCATGGGCAGGTTCTGGCTCCATA...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTTCAGGGTTGAGTGGCTaGAGGGTGGGGTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSSGLSG*RVGSAS
Trigger: TGAGGCCGACCCCACCCTGCAGCCACTCAACCCTGA...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCACGCAAGTTCCCCATCTaGACCGTGAACTCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPRKFPI*TVNSGK
Trigger: TTTGCCTGAGTTCACGGTGCAGATGGGGAACTTGCG...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACCAAGCCCACCTGGGCTaGCACAGGAAAAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYQAHLG*HRKSPR
Trigger: CCTGGGGCTTTTCCTGTGGCAGCCCAGGTGGGCTTG...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCAAAGGGCGACTCGCGGTaGCCAGGGAAGAAGATCCTC +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSKGDSR*PGKKIL
Trigger: GAGGATCTTCTTCCCTGGGCACCGCGAGTCGCCCTT...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTCCACAGTGGGCCGTCTaGTCTCAGGCACACCCAGGT +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSPQWAV*SQAHPG
Trigger: ACCTGGGTGTGCCTGAGAGCAGACGGCCCACTGTGG...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCACTCAACATCAAGGGTaGGAGGGTCTGGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKATQHQG*EGLAAG
Trigger: CCCAGCGGCCAGACCCTCGCACCCTTGATGTTGAGT...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTTTTTCCCGGAGCACATaGTTGGTGAGGCAGGGGACG +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSFSRST*LVRQGT
Trigger: CGTCCCCTGCCTCACCAAGCATGTGCTCCGGGAAAA...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCGAGCTTCCAGGGCTaGCCAGGCCAGGCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASPSFQG*PGQAEA
Trigger: TGCTTCAGCCTGGCCTGGGCAGCCCTGGAAGCTCGG...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTAGCCCAGGGCTCAGCTaGAACAGGAAGTTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSSPGLS*NRKLVA
Trigger: GGCTACCAACTTCCTGTTCCAGCTGAGCCCTGGGCT...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACATCAGGCATCACAGGTaGCAGGCAGTCCCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYIRHHR*QAVPAV
Trigger: GACAGCAGGGACTGCCTGCCACCTGTGATGCCTGAT...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCATTGGTAGGCTGGGCCTaGGGGCACTCATCAGGCATC +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSLVGWA*GHSSGI
Trigger: GATGCCTGATGAGTGCCCCCAGGCCCAGCCTACCAA...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCTGTTCACAGACCCCCTaGTGCACGCTCCCGCATACC +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFCSQTP*CTLPHT
Trigger: GGTATGCGGGAGCGTGCACCAGGGGGTCTGTGAACA...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCGCACTCACGAAGTGGTaGCTGTACTCGGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFALTKW*LYSERR
Trigger: CCGCCTCTCCGAGTACAGCCACCACTTCGTGAGTGC...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCACAGGAAGTAGGCGCTaGCCCCACGTGCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKATGSRR*PHVQRH
Trigger: GTGCCTTTGCACGTGGGGCCAGCGCCTACTTCCTGT...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCACCTCCCTGGACGTaGCCACAGCTGCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASPPPWT*PQLQPG
Trigger: TCCAGGCTGCAGCTGTGGCCACGTCCAGGGAGGTGG...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCACTCCAGAATTGGTGTaGCTTCCAGCGGGACCCGGC +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFTPELV*LPAGPG
Trigger: GCCGGGTCCCGCTGGAAGCCACACCAATTCTGGAGT...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TTCTCCCCCTCCACGGAGAACACACTCCCAGGCTTGTGCCGGAATGGCATGGTGCACCCAGGAAAGCGATaGTGTGTCCATCTTCCATGG +
Preference number: 4 (lower is better)
Translates to: FSPSTENTLPGLCRNGMVHPGKR*CVHLPW
Trigger: CCATGGAAGATGGACACACCATCGCTTTCCTGGGTG...CACCATGCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGGTGGCCATCGCTCCCTaGGCCCAAGTAGACCCTGTG +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPVAIAP*AQVDPV
Trigger: CACAGGGTCTACTTGGGCCCAGGGAGCGATGGCCAC...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GCAGCGGCTGCAGTCTCCATGTCCCACGGAACAGTCATACAGTACCACATGCAGGCACCACCCACAGTATaGGTCCCTGTGAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: AAAAVSMSHGTVIQYHMQAPPTV*VPVSKA
Trigger: TGCCTTGCTCACAGGGACCCATACTGTGGGTGGTGC...CTGCATGTGGTACTGTATGACTGTTCCGTGGGACATGGAGACTGCAGCCGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGCACTGCTCTGGGCCCTaGCCCCTCGAGCACTCAGAA +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPHCSGP*PLEHSE
Trigger: TTCTGAGTGCTCGAGGGGCCAGGGCCCAGAGCAGTG...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CGCAAGTTCCCCATCTGCACCGTGAACTCAGGCAAAGAGTCAGGTGCCTCTCGGTGTTGGCAGGACTCATaGCTGCCACTTGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: RKFPICTVNSGKESGASRCWQDS*LPLADS
Trigger: GCTGTCTGCAAGTGGCAGCCATGAGTCCTGCCAACA...CCGAGAGGCACCTGACTCTTTGCCTGAGTTCACGGTGCAGATGGGGAACTTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACGGCCTCACTAGGGTCTaGGGAGGGGCACATCACACC +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYGLTRV*GGAHHT
Trigger: GGTGTGATGTGCCCCTCCCCAGACCCTAGTGAGGCC...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCATCACACGAGGCCTTGTaGGTGCACAGGTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSSHEAL*VHRCCQ
Trigger: CTGGCAGCACCTGTGCACCCACAAGGCCTCGTGTGA...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCTCACACGAGGCCTTGTaGGTGCACAGGTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKASHEAL*VHRCCQ
Trigger: CTGGCAGCACCTGTGCACCCACAAGGCCTCGTGTGA...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCAGGAGAGGCGACCCTGTaGAGCCAGGGGAAGATATGG +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSGEATL*SQGKIW
Trigger: CCATATCTTCCCCTGGCTCCACAGGGTCGCCTCTCC...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACGCTTCACGGAGCCCATaGCCCCTGGGAAAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNASRSP*PLGKWW
Trigger: CCACCACTTTCCCAGGGGCCATGGGCTCCGTGAAGC...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCTCCAACCACCACTCGGATGTCCTCCAGCCGCCCAGTCAGGAGCTTGGAGCCAACACTCATTGTCTCCTaGGCCATCCTGGAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: SPTTTRMSSSRPVRSLEPTLIVS*AILEKV
Trigger: CACCTTTTCCAGGATGGCCCAGGAGACAATGAGTGT...TGGCTCCAAGCTCCTGACTGGGCGGCTGGAGGACATCCGAGTGGTGGTTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp GGCGTCTGTACCACGTCCAGATTCTGGCCACGGACGCATATCTCACGTCCTCCATGCTGGCAGGTGACATaGCACTGGGTATCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: GVCTTSRFWPRTHISRPPCWQVT*HWVSGG
Trigger: ACCTCCAGATACCCAGTGCCATGTCACCTGCCAGCA...TGGAGGACGTGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAGACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCTGAGCTGGTGCTGCTaGCAGGTGACATGGCACTGG +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFLSWCC*QVTWHW
Trigger: CCAGTGCCATGTCACCTGCCAGCAGCACCAGCTCAG...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp AGACCACGGTCACCCGGATTCTTGGCGTCTGTACCACGTCCAGATTCTGGCCACCACACACAGCCATACTaGGGCATGGCAGTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: RPRSPGFLASVPRPDSGHHTQPY*GMAVWQ
Trigger: CTGCCAAACTGCCATGCCCCAGTATGGCTGTGTGTG...GTGGCCAGAATCTGGACGTGGTACAGACGCCAAGAATCCGGGTGACCGTGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTAGTGGCTCCACCGAGTaGATGAGGGGCGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASSGSTE*MRGAGH
Trigger: GTGCCCAGCGCCCCTCATCCACTCGGTGGAGCCACT...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTGGTCACCCGGATTCTTaGCGTCTGTACCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSGHPDS*RLYHVQ
Trigger: CTGGACGTGGTACAGACGCCAAGAATCCGGGTGACC...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GCAGCGGCTGCAGTCTCCATGTCCCACGGAACAGTCATACAGTACCACATGCAGCGGCACGTGATGAGCTaGGAGGAGTTGACATGGCAC +
Preference number: 4 (lower is better)
Translates to: AAAAVSMSHGTVIQYHMQRHVMS*EELTWH
Trigger: GTGCCATGTCAACTCCTCCCAGCTCATCACGTGCCG...CTGCATGTGGTACTGTATGACTGTTCCGTGGGACATGGAGACTGCAGCCGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGCATAGGAGAAAGGTGTaGGGTTCAGTGTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGHRRKV*GSVLQS
Trigger: ACTTTGCAACACTGAACCCCACACCTTTCTCCTATG...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCTCCGGCTCATCACTTaGCTTCACCAGGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFLRLIT*LHQVPG
Trigger: CCCTGGCACCTGGTGAAGCCAAGTGATGAGCCGGAG...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTGCAGGGTGCCCTTCATaGACAGCAGGCGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSAGCPS*TAGGSG
Trigger: ACCTGACCCGCCTGCTGTCCATGAAGGGCACCCTGC...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAACAGAGTTCATCTCTTaGTCGCTGGCTGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPTEFIS*SLAGTV
Trigger: GACTGTCCCAGCCAGCGACCAAGAGATGAACTCTGT...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCACTCGGGGAGCAGGCTaGGTACTACCCCATGAGCCT +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFTRGAG*VLPHEP
Trigger: AGGCTCATGGGGTAGTACCCAGCCTGCTCCCCGAGT...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
3UTR CAA 72 bp ACCACCTCGAGGCCCTCCAGCTCCATCACACACTCATaGTCTCCTGGGCCATCCTGGAAAAGGTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: TTSRPSSSITHS*SPGPSWKRCRF
Trigger: GAACCTGCACCTTTTCCAGGATGGCCCAGGAGACAATGAGTGTGTGATGGAGCTGGAGGGCCTCGAGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
3UTR CAA 72 bp GATGTTGGGGTCCAAGGTATACTTGAACTGTCCGCGTaGAAGCCTCCGCTCCGTGGCCCCAAACCACACAGC +
Preference number: 4 (lower is better)
Translates to: DVGVQGILELSA*KPPLRGPKPHS
Trigger: GCTGTGTGGTTTGGGGCCACGGAGCGGAGGCTTCAACGCGGACAGTTCAAGTATACCTTGGACCCCAACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCTCACCAGGAGCAGCTaGTTCGGGTTGTTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFLTRSS*FGLLVG
Trigger: GCCTACCAACAACCCGAATCAGCTGCTCCTGGTGAG...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp TTGGTGGGGCCAGCAGAGGTGATGTTGGGGTCCAAGGTATACTTGAACTGTCCGCTCACCAGGAGCAGCTaGTTCGGGTTGTTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: LVGPAEVMLGSKVYLNCPLTRSS*FGLLVG
Trigger: GCCTACCAACAACCCGAATCAGCTGCTCCTGGTGAG...CGGACAGTTCAAGTATACCTTGGACCCCAACATCACCTCTGCTGGCCCCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCTGTGCAGCTGCCCTTaGCTATCACCCAGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFLCSCP*LSPRKA
Trigger: CGCTTTCCTGGGTGATAGTCAAGGGCAGCTGCACAG...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGGCACAGTCCAGGTGCTaGGCACAGGAAGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPAQSRC*AQEATG
Trigger: TCCTGTGGCTTCCTGTGCTCAGCACCTGGACTGTGC...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCCAGTATGGGTCCCTGTaGGCAAGGCAAGATGCACAG +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSQYGSL*ARQDAQ
Trigger: CTGTGCATCTTGCCTTGCTCACAGGGACCCATACTG...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCAAAAGTGGCAGGAATATaGCTCCCCTGGCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSKVAGI*LPWPQG
Trigger: CCCCTGTGGCCAGGGGAGTCATATTCCTGCCACTTT...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CTGTACCACGTCCAGATTCTGGCCACGGACGCATATCTCACGTCCTCCACTGAGGGCAAAGTCGTGTTCTaGGACACCACGTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LYHVQILATDAYLTSSTEGKVVF*DTTSSS
Trigger: GGAAGAGGACGTGGTGTCTCAGAACACGACTTTGCC...CTCAGTGGAGGACGTGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACCCGTCATACTGCACGTaGCCCAGGGAGAAGCGCAAG +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNPSYCT*PREKRK
Trigger: CTTGCGCTTCTCCCTGGGTCACGTGCAGTATGACGG...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGCATGCAGTGCCACGGTaGGCAGAGATGCCACGTAGG +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPHAVPR*AEMPRR
Trigger: CCTACGTGGCATCTCTGCTCACCGTGGCACTGCATG...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACGGGCAACCAGGTCACTaGGCAGAGTGCGGAGGATGT +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNGQPGH*AECGGC
Trigger: ACATCCTCCGCACTCTGCTCAGTGACCTGGTTGCCC...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCGTCAGAAAGAATaGGGTGCCCGGCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASPRQKE*GARPPQ
Trigger: CTGGGGTGGCCGGGCACCTCATTCTTTCTGACGAGG...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGCTGGGACAGTCTGTCTaGTGTCTGCATAGTACCTTT +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQLGQSV*CLHSTF
Trigger: AAAGGTACTATGCAGACATCAGACAGACTGTCCCAG...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCGCCATTGGGAGTGAATaGAGTTGGTGGAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSAIGSE*SWWKGL
Trigger: CAGCCCCTTCCACCAACTGCATTCACTCCCAATGGC...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTAGCCGAGGAGAAAGCTaGAAAGAGCACCTCCCCATG +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSSRGES*KEHLPM
Trigger: CATGGGGAGGTGCTCTTTGCAGCTTTCTCCTCGGCT...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACACTCAGAACGGCGACTaGACCTGCCAAGGAGCACGC +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNTQNGD*TCQGAR
Trigger: GCGTGCTCCTTGGCAGGTGCAGTCGCCGTTCTGAGT...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTTGGGTGCACAGGTGCTaGCAGACACACCAGTTACAC +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSWVHRC*QTHQLH
Trigger: GTGTAACTGGTGTGTCTGGCAGCACCTGTGCACCCA...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CTGTACCACGTCCAGATTCTGGCCACGGACGCATATCTCACGTCCTCCACTGAGTGGGTGCACAGGTGCTaGCAGACACACCAGTTACAC +
Preference number: 4 (lower is better)
Translates to: LYHVQILATDAYLTSSTEWVHRC*QTHQLH
Trigger: GTGTAACTGGTGTGTCTGGCAGCACCTGTGCACCCA...CTCAGTGGAGGACGTGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp TCTTGGCGTCTGTACCACGTCCAGATTCTGGCCACGGACGCATATCTCACGTCCAAAGGTGCAGGTTCCTaGCTAGCAGCCGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: SWRLYHVQILATDAYLTSKGAGS*LAAGFP
Trigger: GGGAAATCCGGCTGCTAGGCAGGAACCTGCACCTTT...GGACGTGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAGACGCCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACCAGTTTGGCAGCGGCTaGAGTCTCCATGTCCCACGG +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNQFGSG*SLHVPR
Trigger: CCGTGGGACATGGAGACTGCAGCCGCTGCCAAACTG...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TTGGTGGGGCCAGCAGAGGTGATGTTGGGGTCCAAGGTATACTTGAACTGTCCGATGCCCAGCACATCCTaGACATGCTGGCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LVGPAEVMLGSKVYLNCPMPSTS*TCWPRL
Trigger: CAACCTGGGCCAGCATGTGCAGGATGTGCTGGGCAT...CGGACAGTTCAAGTATACCTTGGACCCCAACATCACCTCTGCTGGCCCCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACCTCCTCCTTGGACATTaGAAGGTCCAGGTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYLLLGH*KVQVLP
Trigger: GGGGAGAACCTGGACCTTGCAATGTCCAAGGAGGAG...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGCGGTCCCGCACACTaGTCTCCAGATTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKASGPAH*SPDSPA
Trigger: AGCTGGAGAATCTGGAGAGCAGTGTGCGGGACCGCT...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACTCAGAAAGAATGAGGTaGCCGGCCACCCCAGACCGC +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNSERMR*PATPDR
Trigger: GCGGTCTGGGGTGGCCGGGCACCTCATTCTTTCTGA...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACTCGGAGATGCCATGCTaGTGGGCCTGCTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYSEMPC*WACSSS
Trigger: GCTGGATGAGCAGGCCCAGCAGCATGGCATCTCCGA...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACTGTCCTGGTCGGAGATaGCATGCTGCTGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNCPGRR*HAAGPA
Trigger: AGCAGGCCCAGCAGCATGGCATCTCCGACCAGGACA...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCCTTAGTCCCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGTCTGTCTGATGTCTaGATAGTACCTTTCCACCAT +
Preference number: 4 (lower is better)
Translates to: PLVPNSLQTGVTGSLDSGSLSDV*IVPFHH
Trigger: ATGGTGGAAAGGTACTATGCAGACATCAGACAGACT...CCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGGGACTAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACCCTGGCAGGGCCGGCTaGATCAGGAGACAACAGCAT +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYPGRAG*IRRQQH
Trigger: ATGCTGTTGTCTCCTGATCCAGCCGGCCCTGCCAGG...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCTAGCACAGGGCCGGTaGACACTGTGGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASLAQGR*TLWPPA
Trigger: AGCTGGAGGCCACAGTGTCCACCGGCCCTGTGCTAG...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GCAGCGGCTGCAGTCTCCATGTCCCACGGAACAGTCATACAGTACCACATGCAGAAGGCACTCACGAAGTaGTGGCTGTACTCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: AAAAVSMSHGTVIQYHMQKALTK*WLYSER
Trigger: CCTCTCCGAGTACAGCCACCACTTCGTGAGTGCCTT...CTGCATGTGGTACTGTATGACTGTTCCGTGGGACATGGAGACTGCAGCCGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACACAGGAAGTAGGCGCTaGCCCCACGTGCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNTGSRR*PHVQRH
Trigger: GTGCCTTTGCACGTGGGGCCAGCGCCTACTTCCTGT...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTATCCAGGGTGTCCACTaGCAGCTGTGCACAGTCAGA +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSIQGVH*QLCTVR
Trigger: TCTGACTGTGCACAGCTGCCAGTGGACACCCTGGAT...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCATCCAGGGTGTCCACTaGCAGCTGTGCACAGTCAGA +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSIQGVH*QLCTVR
Trigger: TCTGACTGTGCACAGCTGCCAGTGGACACCCTGGAT...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACGCTCTGTGTGGAGTATaGGTGGCCATCGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNALCGV*VAIAPW
Trigger: CCAGGGAGCGATGGCCACCCATACTCCACACAGAGC...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGTTCAGAAGTGTGCTCTaGGTCATGACATACAGGTGC +
Preference number: 4 (lower is better)
Translates to: QIALTMATYEAGQPCGSQFRSVL*VMTYRC
Trigger: GCACCTGTATGTCATGACCCAGAGCACACTTCTGAA...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACTGTTGGCAGGACTCATaGCTGCCACTTGCAGACAGC +
Preference number: 4 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYCWQDS*LPLADS
Trigger: GCTGTCTGCAAGTGGCAGCCATGAGTCCTGCCAACA...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTTGGCCCCTGGGAAAGTaGTGGCAGGAACAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSWPLGK*WQEQWQ
Trigger: CTGCCACTGTTCCTGCCACCACTTTCCCAGGGGCCA...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACGGACCGGCATCAACGTaGAGCCCTGAACGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYGPAST*SPERSP
Trigger: TGGAGAGCGTTCAGGGCTCCACGTTGATGCCGGTCC...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCTCCTGGGCCATCCTaGAAAAGGTGCAGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSSPGPS*KRCRFL
Trigger: CAGGAACCTGCACCTTTTCCAGGATGGCCCAGGAGA...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACCGCGGGCCGGGAAGATaGAATGGACCTTCGGATCCT +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYRGPGR*NGPSDP
Trigger: AGGATCCGAAGGTCCATTCCATCTTCCCGGCCCGCG...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CGCAAGTTCCCCATCTGCACCGTGAACTCAGGCAAAGAGTCAGGTGCCTCTCGGACCACGTCCAGATTCTaGCCACGGACGCATATCTCA +
Preference number: 4 (lower is better)
Translates to: RKFPICTVNSGKESGASRTTSRF*PRTHIS
Trigger: TGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGT...CCGAGAGGCACCTGACTCTTTGCCTGAGTTCACGGTGCAGATGGGGAACTTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCCGGCACGTGATGAGCTaGGAGGAGTTGACATGGCAC +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKARHVMS*EELTWH
Trigger: GTGCCATGTCAACTCCTCCCAGCTCATCACGTGCCG...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTAGGCTTGTGCCGGAATaGCATGGTGGGGTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSRLVPE*HGGVLR
Trigger: CCTGAGGACCCCACCATGCCATTCCGGCACAAGCCT...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCGCCTCCACAGACCCTaGACCTCAGAAGTGACATCC +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFRLHRP*TSEVTS
Trigger: GGATGTCACTTCTGAGGTCCAGGGTCTGTGGAGGCG...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCATACATCCTCCAGCATTaGGGTCCGCTCTCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSYILQH*GPLSRD
Trigger: GTCCCTGGAGAGCGGACCCCAATGCTGGAGGATGTA...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACGGTAGATCTCAGGGATaGCCTTGGCGCGCTCACGCT +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNGRSQG*PWRAHA
Trigger: AGCGTGAGCGCGCCAAGGCCATCCCTGAGATCTACC...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACGGTAGATCTCAGGGATaGCCTTGGCGCGCTCACGCT +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYGRSQG*PWRAHA
Trigger: AGCGTGAGCGCGCCAAGGCCATCCCTGAGATCTACC...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGTGCTGAGAATCACCTaGAACAGGTCATCCACGAAC +
Preference number: 4 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPVLRIT*NRSSTN
Trigger: GTTCGTGGATGACCTGTTCCAGGTGATTCTCAGCAC...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACGAGATGCCATGCTGCTaGGCCTGCTCATCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNEMPCC*ACSSSR
Trigger: CCTGCTGGATGAGCAGGCCCAGCAGCATGGCATCTC...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTACTCGGGGAGCAGGCTaGGTACTACCCCATGAGCCT +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSTRGAG*VLPHEP
Trigger: AGGCTCATGGGGTAGTACCCAGCCTGCTCCCCGAGT...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTGTGTGCTCTGGGTCATaGCATACAGGTGCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSVCSGS*HTGAQR
Trigger: CCTTTGAGCACCTGTATGTCATGACCCAGAGCACAC...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACTCGTCTCCTCTCGGCTaGTGTTGGCAGGACTCATGG +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNSSPLG*CWQDSW
Trigger: CCATGAGTCCTGCCAACATCAGCCGAGAGGAGACGA...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACTCGTCTCCTCTCGGCTaGTGTTGGCAGGACTCATGG +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYSSPLG*CWQDSW
Trigger: CCATGAGTCCTGCCAACATCAGCCGAGAGGAGACGA...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACAAAGTGGCAGGAATATaGCTCCCCTGGCCACAGGGG +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNKVAGI*LPWPQG
Trigger: CCCCTGTGGCCAGGGGAGTCATATTCCTGCCACTTT...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACAGCAGGGCAGGACTCTaGTGTTCCCCAAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNSRAGL*CSPKWQ
Trigger: CTGCCACTTTGGGGAACATCAGAGTCCTGCCCTGCT...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACAGCAGGGCAGGACTCTaGTGTTCCCCAAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYSRAGL*CSPKWQ
Trigger: CTGCCACTTTGGGGAACATCAGAGTCCTGCCCTGCT...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCCAACAGCGCCAAATCTaGGCTCCACGCTCACGGATA +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKAQQRQI*APRSRI
Trigger: TATCCGTGAGCGTGGAGCTCAGATTTGGCGCTGTTG...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACAACAGCGCCAAATCTaGGCTCCACGCTCACGGATA +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSQQRQI*APRSRI
Trigger: TATCCGTGAGCGTGGAGCTCAGATTTGGCGCTGTTG...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCATGGGCGGAGTTCAGTaGCCGCCACACAGTCATAGA +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKAMGGVQ*PPHSHR
Trigger: TCTATGACTGTGTGGCGGTCACTGAACTCCGCCCAT...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCGTCATACTGCACGTaGCCCAGGGAGAAGCGCAAG +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASPSYCT*PREKRK
Trigger: CTTGCGCTTCTCCCTGGGTCACGTGCAGTATGACGG...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACCTCACTGCAGACCCCTaGTGGATGCTCTGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNLTADP*WMLCVE
Trigger: CTCCACACAGAGCATCCAGCAGGGGTCTGCAGTGAG...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACCTCACTGCAGACCCCTaGTGGATGCTCTGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYLTADP*WMLCVE
Trigger: CTCCACACAGAGCATCCAGCAGGGGTCTGCAGTGAG...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCGTGAGCAAGGCAAGATaGACAGTCCAGGTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFVSKAR*TVQVLS
Trigger: GCTCAGCACCTGGACTGTGCATCTTGCCTTGCTCAC...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCTGGGTGCACAGGTGCTaGCAGACACACCAGTTACAC +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFWVHRC*QTHQLH
Trigger: GTGTAACTGGTGTGTCTGGCAGCACCTGTGCACCCA...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCGGGCTCTGATGGCTTaGAACCATGGGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASRALMA*NHGPSI
Trigger: GATGCTGGGCCCATGGTTGCAAGCCATCAGAGCCCG...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCACGGCTCCTCAAATTaGTGGCTACTGCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFHGSSN*WLLQEG
Trigger: ACCCTCCTGCAGTAGCCAGCAATTTGAGGAGCCGTG...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp ACACTCCCAGGCTTGTGCCGGAATGGCATGGTGGGGTCCTCAGGGTTGAGTGGCTGTGGGGTTCAGTGTTaGAAAGTCAAAGACCAGGTT +
Preference number: 4 (lower is better)
Translates to: TLPGLCRNGMVGSSGLSGCGVQC*KVKDQV
Trigger: AACCTGGTCTTTGACTTTGCAACACTGAACCCCACA...GCCACTCAACCCTGAGGACCCCACCATGCCATTCCGGCACAAGCCTGGGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACAGCAGGTTAGAGAGCTaGCCCAGCCCTTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYSRLES*PSPCST
Trigger: TGTGGAGCAAGGGCTGGGGCAGCTCTCTAACCTGCT...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTACTCAAGCTTCCCATaGAGTGCCACGGTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSYSSFP*SATVSR
Trigger: TCTGCTCACCGTGGCACTGCATGGGAAGCTTGAGTA...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACTACTCAAGCTTCCCATaGAGTGCCACGGTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYYSSFP*SATVSR
Trigger: TCTGCTCACCGTGGCACTGCATGGGAAGCTTGAGTA...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACTTTTCCCGGAGCACATaGTTGGTGAGGCAGGGGACG +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYFSRST*LVRQGT
Trigger: CGTCCCCTGCCTCACCAAGCATGTGCTCCGGGAAAA...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACCGAACTTCTGCAGGGTaGCCTTCATGGACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYRTSAG*PSWTAG
Trigger: GCCTGCTGTCCATGAAGGGCACCCTGCAGAAGTTCG...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTGGCAGGGCCGGCTaGATCAGGAGACAACAGCAT +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASPGRAG*IRRQQH
Trigger: ATGCTGTTGTCTCCTGATCCAGCCGGCCCTGCCAGG...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTGGCCCACTGCCAGCTTaGCTGTCTCCTCATAGGAGA +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSGPLPA*LSPHRR
Trigger: TCTCCTATGAGGAGACAGCCAAGCTGGCAGTGGGCC...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCAAGGCACTCACGAAGTaGTGGCTGTACTCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFKALTK*WLYSER
Trigger: CCTCTCCGAGTACAGCCACCACTTCGTGAGTGCCTT...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGTGGCCACTCCAGAATTaGTGTGGCTTCCAGCGGGAC +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPWPLQN*CGFQRD
Trigger: GTCCCGCTGGAAGCCACACCAATTCTGGAGTGGCCA...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACCACCCAGGAAAGCGATaGTGTGTCCATCTTCCATGG +
Preference number: 4 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYHPGKR*CVHLPW
Trigger: CCATGGAAGATGGACACACCATCGCTTTCCTGGGTG...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TTCTCCCCCTCCACGGAGAACACACTCCCAGGCTTGTGCCGGAATGGCATGGTGTTCAGAAGTGTGCTCTaGGTCATGACATACAGGTGC +
Preference number: 4 (lower is better)
Translates to: FSPSTENTLPGLCRNGMVFRSVL*VMTYRC
Trigger: GCACCTGTATGTCATGACCCAGAGCACACTTCTGAA...CACCATGCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGTGACATGGCACTaGGTATCTGGAGGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFQVTWH*VSGGGS
Trigger: TGAGCCACCTCCAGATACCCAGTGCCATGTCACCTG...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCTGCTGGCAGGTGACATaGCACTGGGTATCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFCWQVT*HWVSGG
Trigger: ACCTCCAGATACCCAGTGCCATGTCACCTGCCAGCA...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACACACACAGCCATACTaGGGCATGGCAGTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSHTQPY*GMAVWQ
Trigger: CTGCCAAACTGCCATGCCCCAGTATGGCTGTGTGTG...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTGTCCAAGCCCCTGGCTaGGCTGCAGCATTCTCGAGA +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASVQAPG*AAAFSR
Trigger: TCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGAC...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTTGGGAGGAGTTGACATaGCACGGCTCCTCAAATTGC +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSWEELT*HGSSNC
Trigger: GCAATTTGAGGAGCCGTGCCATGTCAACTCCTCCCA...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACCGGCACGTGATGAGCTaGGAGGAGTTGACATGGCAC +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYRHVMS*EELTWH
Trigger: GTGCCATGTCAACTCCTCCCAGCTCATCACGTGCCG...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TGCTGGCAGGTGACATGGCACTGGGTATCTGGAGGTGGCTCACACTCGACCCGGCATAGGAGAAAGGTGTaGGGTTCAGTGTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: CWQVTWHWVSGGGSHSTRHRRKV*GSVLQS
Trigger: ACTTTGCAACACTGAACCCCACACCTTTCTCCTATG...CCGGGTCGAGTGTGAGCCACCTCCAGATACCCAGTGCCATGTCACCTGCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp TTGGTGGGGCCAGCAGAGGTGATGTTGGGGTCCAAGGTATACTTGAACTGTCCGCCACCACCTCCTCCTTaGACATTGCAAGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LVGPAEVMLGSKVYLNCPPPPPP*TLQGPG
Trigger: ACCTGGACCTTGCAATGTCCAAGGAGGAGGTGGTGG...CGGACAGTTCAAGTATACCTTGGACCCCAACATCACCTCTGCTGGCCCCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTGGCTCTCCAGCGTGTaGATGAACTTGGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSWLSSV*MNLVRK
Trigger: CTTCCTCACCAAGTTCATCCACACGCTGGAGAGCCA...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGGCTGAAAAGGTGCGCTaGCTCTCCAGCGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPAEKVR*LSSVWM
Trigger: CATCCACACGCTGGAGAGCCAGCGCACCTTTTCAGC...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACTCAGCTTGGGGTTCTTaGCCACATACTGGGCAACCA +
Preference number: 4 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYSAWGS*PHTGQP
Trigger: TGGTTGCCCAGTATGTGGCCAAGAACCCCAAGCTGA...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCGAGGGTCTGGCCGCTaGGTGAGAGGCACTCCTTTA +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASRGSGR*VRGTPL
Trigger: TAAAGGAGTGCCTCTCACCCAGCGGCCAGACCCTCG...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTCTTGGTCGCTGGCTaGGACAGTCTGTCTGATGTC +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSLLVAG*DSLSDV
Trigger: GACATCAGACAGACTGTCCCAGCCAGCGACCAAGAG...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGGCACCTAAGAAGGTaGCCTCTCCTCCGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPRHLRR*PLLRAS
Trigger: GGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCT...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCGAGCCACCAGGAGACTaGGAGTCACCTTCCACTAAC +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKAEPPGD*ESPSTN
Trigger: GTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTC...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCCTTCCAGCCACTCTCTaGAAGCCCTTAGTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKALPATL*KPLVPN
Trigger: GTTGGGGACTAAGGGCTTCCAGAGAGTGGCTGGAAG...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCGTGTGGGAGTCACCTaGACTCCAAGGCGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASRVGVT*TPRRLV
Trigger: AACAAGGCGCCTTGGAGTTCAGGTGACTCCCACACG...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296440.11
CDS-3UTR TCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACATGGGCGGAGTTCAGTaGCCGCCACACAGTCATAGA +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNMGGVQ*PPHSHR
Trigger: TCTATGACTGTGTGGCGGTCACTGAACTCCGCCCAT...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGGGCAAAGTCGTGTTCTaGGACACCACGTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPGKVVF*DTTSSS
Trigger: GGAAGAGGACGTGGTGTCTCAGAACACGACTTTGCC...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTACACCGCAGTTGTTCTaGCTGCTGCTCCGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASTPQLF*LLLRQQ
Trigger: TTGCTGCCGGAGCAGCAGTCAGAACAACTGCGGTGT...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCGGTCCAAGGTATACTTaGACTGTCCGCGTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKAGPRYT*TVRVEA
Trigger: GGCTTCAACGCGGACAGTTCAAGTATACCTTGGACC...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CAGTTTGGCAGCGGCTGCAGTCTCCATGTCCCACGGAACAGTCATACAGTACCAGGTCCAAGGTATACTTaGACTGTCCGCGTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: QFGSGCSLHVPRNSHTVPGPRYT*TVRVEA
Trigger: GGCTTCAACGCGGACAGTTCAAGTATACCTTGGACC...TGGTACTGTATGACTGTTCCGTGGGACATGGAGACTGCAGCCGCTGCCAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGGGTCATAGTACTTGTTaGTGTACTTGTAGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQGHSTC*CTCRVH
Trigger: ATGAACTCTACAAGTACATCAACAAGTACTATGACC...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACTCCCTTGCCAGGTGCTaGAGATACGTGCCATTGGGA +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYSLARC*RYVPLG
Trigger: TCCCAATGGCACGTATCTGCAGCACCTGGCAAGGGA...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCCGAGGAGAAAGCTaGAAAGAGCACCTCCCCATG +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPSRGES*KEHLPM
Trigger: CATGGGGAGGTGCTCTTTGCAGCTTTCTCCTCGGCT...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACCAGACCCCTGCTGGATaGTCTGTGTGGAGTATGGGT +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNQTPAG*SVWSMG
Trigger: ACCCATACTCCACACAGAGCATCCAGCAGGGGTCTG...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGCAGACCCCTGCTGGATaGTCTGTGTGGAGTATGGGT +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPQTPAG*SVWSMG
Trigger: ACCCATACTCCACACAGAGCATCCAGCAGGGGTCTG...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTGAGGTCTCTGCTCACTaGAGACCCCTGCTGGATGCT +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASEVSAH*RPLLDA
Trigger: AGCATCCAGCAGGGGTCTGCAGTGAGCAGAGACCTC...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACGTGAGCAAGGCAAGATaGACAGTCCAGGTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNVSKAR*TVQVLS
Trigger: GCTCAGCACCTGGACTGTGCATCTTGCCTTGCTCAC...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAAAGGTGCAGGTTCCTaGCTAGCAGCCGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPKGAGS*LAAGFP
Trigger: GGGAAATCCGGCTGCTAGGCAGGAACCTGCACCTTT...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGCTCCTCCTTGGACATTaGAAGGTCCAGGTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPLLLGH*KVQVLP
Trigger: GGGGAGAACCTGGACCTTGCAATGTCCAAGGAGGAG...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTAGGCAAAGAGTCAGGTaGCTCTCGGAGGGCATGGTG +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASRQRVR*LSEGMV
Trigger: CACCATGCCCTCCGAGAGGCACCTGACTCTTTGCCT...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTAGCAGGTTAGAGAGCTaGCCCAGCCCTTGCTCCACA +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASSRLES*PSPCST
Trigger: TGTGGAGCAAGGGCTGGGGCAGCTCTCTAACCTGCT...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGGTGTATTTGGCCTTaGCTGTCACACTGTCCACTG +
Preference number: 4 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYRCIWP*LSHCPL
Trigger: CAGTGGACAGTGTGACAGGCAAGGCCAAATACACCT...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCGAACTTCTGCAGGGTaGCCTTCATGGACAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASRTSAG*PSWTAG
Trigger: GCCTGCTGTCCATGAAGGGCACCCTGCAGAAGTTCG...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTGGGAGTGAATGCAGTTaGTGGAAGGGGCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASGSECS*WKGLEG
Trigger: ACCCTCCAGCCCCTTCCACCAACTGCATTCACTCCC...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACAAGGCACTCACGAAGTaGTGGCTGTACTCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYKALTK*WLYSER
Trigger: CCTCTCCGAGTACAGCCACCACTTCGTGAGTGCCTT...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTATTTCCCGCTCCACATaGACCGGCATCAACGTGGAG +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSISRST*TGINVE
Trigger: CTCCACGTTGATGCCGGTCCATGTGGAGCGGGAAAT...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACACTCATTGTCTCCTaGGCCATCCTGGAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSTLIVS*AILEKV
Trigger: CACCTTTTCCAGGATGGCCCAGGAGACAATGAGTGT...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGATGGCACTGGGTATCTaGAGGTGGCTCACACTCGAC +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPMALGI*RWLTLD
Trigger: GTCGAGTGTGAGCCACCTCCAGATACCCAGTGCCAT...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTCACACACAGCCATACTaGGGCATGGCAGTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSHTQPY*GMAVWQ
Trigger: CTGCCAAACTGCCATGCCCCAGTATGGCTGTGTGTG...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTTACAGGCCCAGTCAGTaGCTCCACCGAGTGGATGAG +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASYRPSQ*LHRVDE
Trigger: CTCATCCACTCGGTGGAGCCACTGACTGGGCCTGTA...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACGGCTCCTCAAATTGCTaGCTACTGCAGGAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNGSSNC*LLQEGP
Trigger: TGGACCCTCCTGCAGTAGCCAGCAATTTGAGGAGCC...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACCCACCACCTCCTCCTTaGACATTGCAAGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNPPPPP*TLQGPG
Trigger: ACCTGGACCTTGCAATGTCCAAGGAGGAGGTGGTGG...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTTCAGAGGCAAGCTGTTaGTCTTCCAGATGTGGATGG +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSSEASC*SSRCGW
Trigger: CCATCCACATCTGGAAGACCAACAGCTTGCCTCTGA...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACCTCTTGGTCGCTGGCTaGGACAGTCTGTCTGATGTC +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNLLVAG*DSLSDV
Trigger: GACATCAGACAGACTGTCCCAGCCAGCGACCAAGAG...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCACAGAGTTCATCTCTTaGTCGCTGGCTGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFTEFIS*SLAGTV
Trigger: GACTGTCCCAGCCAGCGACCAAGAGATGAACTCTGT...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACGAAAAGCTGGGTCAATaGAGTCACCACTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYEKLGQ*SHHSPQ
Trigger: TTGGGGAGAGTGGTGACTCCATTGACCCAGCTTTTC...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
3UTR CAA 72 bp GGTGTGGGGTTCAGTGTTGCAAAGTCAAAGACCAGGTaGTCAAGGATAAATTCCACCCGGACCCAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GVGFSVAKSKTR*SRINSTRTQGS
Trigger: GGACCCCTGGGTCCGGGTGGAATTTATCCTTGACAACCTGGTCTTTGACTTTGCAACACTGAACCCCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR TCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCAGTATGGGTCCCTGTaGGCAAGGCAAGATGCACAG +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASQYGSL*ARQDAQ
Trigger: CTGTGCATCTTGCCTTGCTCACAGGGACCCATACTG...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTGGTCCAAGGTATACTTaGACTGTCCGCGTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSGPRYT*TVRVEA
Trigger: GGCTTCAACGCGGACAGTTCAAGTATACCTTGGACC...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTTCCCCATCTGCACCGTaGACTCAGGCAAAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASSPSAP*TQAKSQ
Trigger: CTGACTCTTTGCCTGAGTTCACGGTGCAGATGGGGA...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACTGCGGAGGATGTCAGTaGAATACTCAAGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYCGGCQ*NTQASH
Trigger: ATGGGAAGCTTGAGTATTTCACTGACATCCTCCGCA...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp GGCGTCTGTACCACGTCCAGATTCTGGCCACGGACGCATATCTCACGTCCTCCAGTCATGACATACAGGTaGTCAAAGGTCCCATCAAAG +
Preference number: 4 (lower is better)
Translates to: GVCTTSRFWPRTHISRPPVMTYR*SKVPSK
Trigger: CTTTGATGGGACCTTTGAGCACCTGTATGTCATGAC...TGGAGGACGTGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAGACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCACGGCTCCTCAAATTaGTGGCTACTGCAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASHGSSN*WLLQEG
Trigger: ACCCTCCTGCAGTAGCCAGCAATTTGAGGAGCCGTG...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTCACCCAGGAAAGCGATaGTGTGTCCATCTTCCATGG +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSHPGKR*CVHLPW
Trigger: CCATGGAAGATGGACACACCATCGCTTTCCTGGGTG...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACACTGCAGACCCCTGCTaGATGCTCTGTGTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYTADPC*MLCVEY
Trigger: ATACTCCACACAGAGCATCCAGCAGGGGTCTGCAGT...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTAAGAGAGGGAAGTTTTaGCGATCACAACAGCGCCAA +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSKRGKF*RSQQRQ
Trigger: TTGGCGCTGTTGTGATCGCCAAAACTTCCCTCTCTT...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTAGCCAGGGGAAGATATaGAGCCAGAACCTGCCCATG +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASSQGKI*SQNLPM
Trigger: CATGGGCAGGTTCTGGCTCCATATCTTCCCCTGGCT...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCACACTCATTGTCTCCTaGGCCATCCTGGAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFTLIVS*AILEKV
Trigger: CACCTTTTCCAGGATGGCCCAGGAGACAATGAGTGT...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACACCACGTCCAGATTCTaGCCACGGACGCATATCTCA +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYTTSRF*PRTHIS
Trigger: TGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGT...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACTTCTTGGCCACATACTaGGCAACCAGGTCACTGAGC +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNFLATY*ATRSLS
Trigger: GCTCAGTGACCTGGTTGCCCAGTATGTGGCCAAGAA...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGTCAGCTTGGGGTTCTTaGCCACATACTGGGCAACCA +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPSAWGS*PHTGQP
Trigger: TGGTTGCCCAGTATGTGGCCAAGAACCCCAAGCTGA...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACTGTCACACTGTCCACTaGCCCCTTATCCACTTGGTG +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYCHTVH*PLIHLV
Trigger: CACCAAGTGGATAAGGGGCCAGTGGACAGTGTGACA...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCCACAGTTGCTCCATCTaGGACCTTGTAATGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKAHSCSI*DLVMLQ
Trigger: CTGCAGCATTACAAGGTCCCAGATGGAGCAACTGTG...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGCTTAGACCTAGGATGTaGCAGCAGCAACAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPLRPRM*QQQQGQ
Trigger: CTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAG...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp GCAGCGGCTGCAGTCTCCATGTCCCACGGAACAGTCATACAGTACCACATGCAGGTGCACAGTCAGAATTaGCATCATACTCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: AAAAVSMSHGTVIQYHMQVHSQN*HHTRCR
Trigger: CCTACATCGAGTATGATGTCAATTCTGACTGTGCAC...CTGCATGTGGTACTGTATGACTGTTCCGTGGGACATGGAGACTGCAGCCGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR GCA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTTGTGGGGTTCAGTGTTaGAAAGTCAAAGACCAGGTT +
Preference number: 4 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSCGVQC*KVKDQV
Trigger: AACCTGGTCTTTGACTTTGCAACACTGAACCCCACA...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCGCAAGTTCCCCATCTaGACCGTGAACTCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASRKFPI*TVNSGK
Trigger: TTTGCCTGAGTTCACGGTGCAGATGGGGAACTTGCG...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCCCCTTATCCACTTGGTaGTTAATCCCTCGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKAPLSTW*LIPRKS
Trigger: GCTCTTTCGAGGGATTAAGCACCAAGTGGATAAGGG...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTAGGTGTATTTGGCCTTaGCTGTCACACTGTCCACTG +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSRCIWP*LSHCPL
Trigger: CAGTGGACAGTGTGACAGGCAAGGCCAAATACACCT...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACCGGGGAATGTCCCGTaGATACAGAAGTTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: PEPPGDWESPSTNSACQSPGNVP*IQKFVD
Trigger: ATCAACAAACTTCTGTATGCACGGGACATTCCCCGG...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACGTTTTCCACAGCAGCTaGAATCTGCTGGAGCCGATA +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNVFHSS*NLLEPI
Trigger: TATCGGCTCCAGCAGATTGCAGCTGCTGTGGAAAAC...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTACCACGTCCAGATTCTaGCCACGGACGCATATCTCA +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASTTSRF*PRTHIS
Trigger: TGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGT...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACCATAGGAGAAAGGTGTaGGGTTCAGTGTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYHRRKV*GSVLQS
Trigger: ACTTTGCAACACTGAACCCCACACCTTTCTCCTATG...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTTGTCACACTGTCCACTaGCCCCTTATCCACTTGGTG +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASCHTVH*PLIHLV
Trigger: CACCAAGTGGATAAGGGGCCAGTGGACAGTGTGACA...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTCACAGTTGCTCCATCTaGGACCTTGTAATGCTGCAG +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSHSCSI*DLVMLQ
Trigger: CTGCAGCATTACAAGGTCCCAGATGGAGCAACTGTG...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTGTGCTGAGAATCACCTaGAACAGGTCATCCACGAAC +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSVLRIT*NRSSTN
Trigger: GTTCGTGGATGACCTGTTCCAGGTGATTCTCAGCAC...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACTCAGAGGCAAGCTGTTaGTCTTCCAGATGTGGATGG +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYSEASC*SSRCGW
Trigger: CCATCCACATCTGGAAGACCAACAGCTTGCCTCTGA...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACTGCGGAGGATGTCAGTaGAATACTCAAGCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNCGGCQ*NTQASH
Trigger: ATGGGAAGCTTGAGTATTTCACTGACATCCTCCGCA...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCGTCATGACATACAGGTaGTCAAAGGTCCCATCAAAG +
Preference number: 4 (lower is better)
Translates to: SACQSLQAPKKVASPPSFVMTYR*SKVPSK
Trigger: CTTTGATGGGACCTTTGAGCACCTGTATGTCATGAC...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGCCCTTATCCACTTGGTaGTTAATCCCTCGAAAGAGC +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPPLSTW*LIPRKS
Trigger: GCTCTTTCGAGGGATTAAGCACCAAGTGGATAAGGG...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACTTCAGAAGTGTGCTCTaGGTCATGACATACAGGTGC +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNFRSVL*VMTYRC
Trigger: GCACCTGTATGTCATGACCCAGAGCACACTTCTGAA...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACGTGCACAGTCAGAATTaGCATCATACTCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNVHSQN*HHTRCR
Trigger: CCTACATCGAGTATGATGTCAATTCTGACTGTGCAC...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACGTGCACAGTCAGAATTaGCATCATACTCGATGTAGG +
Preference number: 4 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYVHSQN*HHTRCR
Trigger: CCTACATCGAGTATGATGTCAATTCTGACTGTGCAC...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACGTTCCTATAGATCTGTaGCCTTGTTTTCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNVPIDL*PCFPQQ
Trigger: CTGCTGTGGAAAACAAGGTCACAGATCTATAGGAAC...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACGTCATGACATACAGGTaGTCAAAGGTCCCATCAAAG +
Preference number: 4 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNVMTYR*SKVPSK
Trigger: CTTTGATGGGACCTTTGAGCACCTGTATGTCATGAC...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTTGTGGGGTTCAGTGTTaGAAAGTCAAAGACCAGGTT +
Preference number: 4 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSCGVQC*KVKDQV
Trigger: AACCTGGTCTTTGACTTTGCAACACTGAACCCCACA...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCGGTCATAGTACTTGTTaGTGTACTTGTAGAGTTCAT +
Preference number: 4 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSGHSTC*CTCRVH
Trigger: ATGAACTCTACAAGTACATCAACAAGTACTATGACC...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR TCA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTGTTCCTATAGATCTGTaGCCTTGTTTTCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: PSTNSACQSLQAPKKVASVPIDL*PCFPQQ
Trigger: CTGCTGTGGAAAACAAGGTCACAGATCTATAGGAAC...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR GCA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGTCTGTCTGATGTCTaGATAGTACCTTTCCACCAT +
Preference number: 4 (lower is better)
Translates to: TNSACQSLQAPKKVASPPSLSDV*IVPFHH
Trigger: ATGGTGGAAAGGTACTATGCAGACATCAGACAGACT...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS TCA 90 bp CCCCCGTCCACTCGTCCGCCTCGGGCAGCTCGCCGCCTTCTCTCGTaGGCCAGTCCAGGGCGGGCTTCACGGAGCCCATGGCCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: PPSTRPPRAARRLLS*ASPGRASRSPWPLG
Trigger: TCCCAGGGGCCATGGGCTCCGTGAAGCCCGCCCTGGACTGGCTCACGAGAGAAGGCGGCGAGCTGCCCGAGGCGGACGAGTGGACGGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS GCA 90 bp TGTGTGTCCCCAGGCCGCTCTGGCCGCAGCAGCAGCTGCTCGAGCTaGCCCAGGCGCCGCTGTTCACAGACCCCCTGGTGCACGCTCCCG +
Preference number: 5 (lower is better)
Translates to: CVSPGRSGRSSSCSS*PRRRCSQTPWCTLP
Trigger: CGGGAGCGTGCACCAGGGGGTCTGTGAACAGCGGCGCCTGGGGCAGCTCGAGCAGCTGCTGCTGCGGCCAGAGCGGCCTGGGGACACACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS GCA 90 bp TCTCAGGGATGGCCTTGGCGCGCTCACGCTCCCCGCCCCGAAGGCTaGCCCTCCGAGGCCTGGGCGGCTCCGGCTCATCACTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: SQGWPWRAHAPRPEG*PSEAWAAPAHHLAS
Trigger: TGAAGCCAAGTGATGAGCCGGAGCCGCCCAGGCCTCGGAGGGGCAGCCTTCGGGGCGGGGAGCGTGAGCGCGCCAAGGCCATCCCTGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000456774.5
ENST00000478171.1
ENST00000485535.5
CDS CCA 90 bp TCTCGTGAGCCAGTCCAGGGCGGGCTTCACGGAGCCCATGGCCCCTaGGAAAGTGGTGGCAGGAACAGTGGCAGGGGGCAGGTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: SREPVQGGLHGAHGP*ESGGRNSGRGQVQG
Trigger: CCCCTGGACCTGCCCCCTGCCACTGTTCCTGCCACCACTTTCCCAGGGGCCATGGGCTCCGTGAAGCCCGCCCTGGACTGGCTCACGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGAGCTGCCCCAGCCCTaGCTCCACAGTGGGCCGTCT +
Preference number: 5 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLELPQP*LHSGPS
Trigger: AGACGGCCCACTGTGGAGCAAGGGCTGGGGCAGCTC...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS GCA 90 bp GCCAGGGACCTGCCCACTGACCGTGAACTCAGGCAAAGAGTCAGGTaGCTCTCGGAGGGCATGGTGCCGTGGCAGGGGCTGCTCCACGGG +
Preference number: 5 (lower is better)
Translates to: ARDLPTDRELRQRVR*LSEGMVPWQGLLHG
Trigger: CCCGTGGAGCAGCCCCTGCCACGGCACCATGCCCTCCGAGAGGCACCTGACTCTTTGCCTGAGTTCACGGTCAGTGGGCAGGTCCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473996.1
CDS-3UTR CAA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGATCTCAGGGATGGCCTaGGCGCGCTCACGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQISGMA*ARSRSP
Trigger: CGGGGAGCGTGAGCGCGCCAAGGCCATCCCTGAGAT...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTAATCTCAGGGATGGCCTaGGCGCGCTCACGCTCCCCG +
Preference number: 5 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVISGMA*ARSRSP
Trigger: CGGGGAGCGTGAGCGCGCCAAGGCCATCCCTGAGAT...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS TCA 90 bp ACGCTCCCGCATACCACCAGGGCCCCTGGGCTCACCAGGAGCAGCTaGTTCGGGTTGTTGGTAGGCTGGGCCTGGGGGCACTCATCAGGC +
Preference number: 5 (lower is better)
Translates to: TLPHTTRAPGLTRSS*FGLLVGWAWGHSSG
Trigger: GCCTGATGAGTGCCCCCAGGCCCAGCCTACCAACAACCCGAATCAGCTGCTCCTGGTGAGCCCAGGGGCCCTGGTGGTATGCGGGAGCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS GCA 90 bp GGGCCTGGGGGCACTCATCAGGCATCACAGGTGGCAGGCAGTCCCTaGTGTCTAGCACAGGGCCGGTGGACACTGTGGCCTCCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: GPGGTHQASQVAGSP*CLAQGRWTLWPPAA
Trigger: TGCAGCTGGAGGCCACAGTGTCCACCGGCCCTGTGCTAGACAGCAGGGACTGCCTGCCACCTGTGATGCCTGATGAGTGCCCCCAGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS GCA 90 bp CTGCAGGTCCCGCCGCAGGAACAGGAAGTAGGCGCTGGCCCCACGTaGAAAGGCACTCACGAAGTGGTGGCTGTACTCGGAGAGGCGGCC +
Preference number: 5 (lower is better)
Translates to: LQVPPQEQEVGAGPT*KGTHEVVAVLGEAA
Trigger: GGCCGCCTCTCCGAGTACAGCCACCACTTCGTGAGTGCCTTTGCACGTGGGGCCAGCGCCTACTTCCTGTTCCTGCGGCGGGACCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS GCA 90 bp TGCTCCACAGTGGGCCGTCTGCTCTCAGGCACACCCAGGTCCCGGTaGAAGGGCGACTCGCGGTGCCCAGGGAAGAAGATCCTCTCCGCA +
Preference number: 5 (lower is better)
Translates to: CSTVGRLLSGTPRSR*KGDSRCPGKKILSA
Trigger: TGCGGAGAGGATCTTCTTCCCTGGGCACCGCGAGTCGCCCTTGCACCGGGACCTGGGTGTGCCTGAGAGCAGACGGCCCACTGTGGAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000456774.5
ENST00000461261.1
ENST00000485535.5
CDS CCA 90 bp CAAACGTCTCCGGGACCACGCGACGCCTCCGTCCAAGCCCCTGGCTaGGCTGCAGCATTCTCGAGACCACGGTCACCCGGATTCTTGGCG +
Preference number: 5 (lower is better)
Translates to: QTSPGPRDASVQAPG*AAAFSRPRSPGFLA
Trigger: CGCCAAGAATCCGGGTGACCGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGGCGTCGCGTGGTCCCGGAGACGTTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465117.5
CDS-3UTR CAA 90 bp AGCGTGGCAGGCGTGGGGCGTGGGCTGGTCTCACACCGCAGTTGTTCTGACTGCCTGGGGCATGGCAGTTaGGCAGCGGCTGCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: SVAGVGRGLVSHRSCSDCLGHGS*AAAAVS
Trigger: GGAGACTGCAGCCGCTGCCAAACTGCCATGCCCCAG...GCAGTCAGAACAACTGCGGTGTGAGACCAGCCCACGCCCCACGCCTGCCACGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CAA 90 bp CTCCACCGAGTGGATGAGGGGCGCTGGGCACTGGGTGGCCACAGCCTCAGCCTCCGGTCACCCGGATTCTaGGCGTCTGTACCACGTCCA +
Preference number: 5 (lower is better)
Translates to: LHRVDEGRWALGGHSLSLRSPGF*ASVPRP
Trigger: TGGACGTGGTACAGACGCCAAGAATCCGGGTGACCG...GAGGCTGAGGCTGTGGCCACCCAGTGCCCAGCGCCCCTCATCCACTCGGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CAA 90 bp GAAGCCTCCGCTCCGTGGCCCCAAACCACACAGCCACAGGGAGCGTGGCAGGCGGCCACCACCTCCTCCTaGGACATTGCAAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: EASAPWPQTTQPQGAWQAATTSS*DIARSR
Trigger: CCTGGACCTTGCAATGTCCAAGGAGGAGGTGGTGGC...CGCCTGCCACGCTCCCTGTGGCTGTGTGGTTTGGGGCCACGGAGCGGAGGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS TCA 90 bp AGCCGGATTTCCCGCTCCACATGGACCGGCATCAACGTGGAGCCCTaGACGCTCTCCACACAGGGGCAGGAGCTTGCCCCCAAGGTCGCC +
Preference number: 5 (lower is better)
Translates to: SRISRSTWTGINVEP*TLSTQGQELAPKVA
Trigger: GGCGACCTTGGGGGCAAGCTCCTGCCCCTGTGTGGAGAGCGTTCAGGGCTCCACGTTGATGCCGGTCCATGTGGAGCGGGAAATCCGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
ENST00000462738.1
ENST00000484485.5
CDS GCA 90 bp TCCCTGCTGTCTAGCACAGGGCCGGTGGACACTGTGGCCTCCAGCTaGAGCCCAGGGCTCAGCTGGAACAGGAAGTTGGTAGCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: SLLSSTGPVDTVASS*SPGLSWNRKLVAPR
Trigger: CCTGGGGGCTACCAACTTCCTGTTCCAGCTGAGCCCTGGGCTGCAGCTGGAGGCCACAGTGTCCACCGGCCCTGTGCTAGACAGCAGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS GCA 90 bp CTCTCCACACAGGGGCAGGAGCTTGCCCCCAAGGTCGCCTCTTCCTaGAGGCACCAAGGGCAAGGCAGTCTATGGAGCCCACCCTGCCCA +
Preference number: 5 (lower is better)
Translates to: LSTQGQELAPKVASS*RHQGQGSLWSPPCP
Trigger: TGGGCAGGGTGGGCTCCATAGACTGCCTTGCCCTTGGTGCCTGCAGGAAGAGGCGACCTTGGGGGCAAGCTCCTGCCCCTGTGTGGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462738.1
CDS CCA 90 bp TCACGAAGTGGTGGCTGTACTCGGAGAGGCGGCCCACTGCCAGCTTaGCTGTCTCCTCATAGGAGAAGGCAGCTTGGGGGTCGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: SRSGGCTRRGGPLPA*LSPHRRRQLGGRAA
Trigger: GGCCGCCCGACCCCCAAGCTGCCTTCTCCTATGAGGAGACAGCCAAGCTGGCAGTGGGCCGCCTCTCCGAGTACAGCCACCACTTCGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS CCA 90 bp AGAAAGCTGCAAAGAGCACCTCCCCATGCGCCACCTCCCTGGACGTaGCCACAGCTGCAGCCTGGATCAGCCCGTAGCGGCCACCTTCGC +
Preference number: 5 (lower is better)
Translates to: RKLQRAPPHAPPPWT*PQLQPGSARSGHLR
Trigger: GCGAAGGTGGCCGCTACGGGCTGATCCAGGCTGCAGCTGTGGCCACGTCCAGGGAGGTGGCGCATGGGGAGGTGCTCTTTGCAGCTTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS CCA 90 bp GCCACTCCAGAATTGGTGTGGCTTCCAGCGGGACCCGGCTGGCCATaGGGCTGGGCGTGTGGTCTGAGCCACAGGGATAAGCATCCAGGG +
Preference number: 5 (lower is better)
Translates to: ATPELVWLPAGPGWP*GWACGLSHRDKHPG
Trigger: CCCTGGATGCTTATCCCTGTGGCTCAGACCACACGCCCAGCCCCATGGCCAGCCGGGTCCCGCTGGAAGCCACACCAATTCTGGAGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
ENST00000473683.1
CDS-3UTR CAA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTAGCATCACACGAGGCCTaGTGGGTGCACAGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVASHEA*WVHRCC
Trigger: GCAGCACCTGTGCACCCACAAGGCCTCGTGTGATGC...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CTCCACCGAGTGGATGAGGGGCGCTGGGCACTGGGTGGCCACAGCCTCAGCCTCATGAGCTGGGAGGAGTaGACATGGCACGGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: LHRVDEGRWALGGHSLSLMSWEE*TWHGSS
Trigger: TGAGGAGCCGTGCCATGTCAACTCCTCCCAGCTCAT...GAGGCTGAGGCTGTGGCCACCCAGTGCCCAGCGCCCCTCATCCACTCGGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CAA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGCCACCACCTCCTCCTaGGACATTGCAAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLATTSS*DIARSR
Trigger: CCTGGACCTTGCAATGTCCAAGGAGGAGGTGGTGGC...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGAGTCCCGGCCCAGCTaGTGGTCGGCCAGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPESRPS*WSARVQ
Trigger: CTGCACCCTGGCCGACCACAAGCTGGGCCGGGACTC...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CTGTCCACACGCAGACGGCCGGCCCGACGCAGAAACAGCCCCACACGGAGCTCCCCATCACCTGATGGCTaGCAACCATGGGCCCAGCAT +
Preference number: 5 (lower is better)
Translates to: LSTRRRPARRRNSPTRSSPSPDG*QPWAQH
Trigger: ATGCTGGGCCCATGGTTGCAAGCCATCAGGTGATGG...GGAGCTCCGTGTGGGGCTGTTTCTGCGTCGGGCCGGCCGTCTGCGTGTGGACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS TCA 90 bp TGTCCGAGCTGCATGGTGGCTGAGGGCTTAGAAGTTTGGAGGGCCTaGCCCTCCCTGGACAGGAGCCCTGTCCACCTCTGCCCCCTCACC +
Preference number: 5 (lower is better)
Translates to: CPSCMVAEGLEVWRA*PSLDRSPVHLCPLT
Trigger: GGTGAGGGGGCAGAGGTGGACAGGGCTCCTGTCCAGGGAGGGTCAGGCCCTCCAAACTTCTAAGCCCTCAGCCACCATGCAGCTCGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461261.1
CDS TCA 90 bp GCTCTTCCTCCTGCTCAGCCCCAGGGTCAGGAGAGGATGGCCAGATaGGTCCTACTCGCCCAGGCCTGCCTGACAATCCCCAGGCACACC +
Preference number: 5 (lower is better)
Translates to: ALPPAQPQGQERMAR*VLLAQACLTIPRHT
Trigger: GGTGTGCCTGGGGATTGTCAGGCAGGCCTGGGCGAGTAGGACTCATCTGGCCATCCTCTCCTGACCCTGGGGCTGAGCAGGAGGAAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485535.5
CDS GCA 90 bp ACCATGGGCCCAGCATCACACGAGGCCTTGTGGGTGCACAGGTGCTaGCAGACACACCAGTTACACCCCCAGCGGCTGCTCACACAGGCC +
Preference number: 5 (lower is better)
Translates to: TMGPASHEALWVHRC*QTHQLHPQRLLTQA
Trigger: GGCCTGTGTGAGCAGCCGCTGGGGGTGTAACTGGTGTGTCTGGCAGCACCTGTGCACCCACAAGGCCTCGTGTGATGCTGGGCCCATGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
ENST00000466353.1
CDS GCA 90 bp GAGCAAGGGTTTGGCCCAGGTCAATGCCCAGCCCGGCCAGGGACCTaGCCACTGACCGTGAACTCAGGCAAAGAGTCAGGTGCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: EQGFGPGQCPARPGT*PLTVNSGKESGASR
Trigger: CCGAGAGGCACCTGACTCTTTGCCTGAGTTCACGGTCAGTGGGCAGGTCCCTGGCCGGGCTGGGCATTGACCTGGGCCAAACCCTTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473996.1
CDS CCA 90 bp CCAGAATTGGTGTGGCTTCCAGCGGGACCCGGCTGGCCATGGGGCTaGGCGTGTGGTCTGAGCCACAGGGATAAGCATCCAGGGTGTCCA +
Preference number: 5 (lower is better)
Translates to: PELVWLPAGPGWPWG*ACGLSHRDKHPGCP
Trigger: TGGACACCCTGGATGCTTATCCCTGTGGCTCAGACCACACGCCCAGCCCCATGGCCAGCCGGGTCCCGCTGGAAGCCACACCAATTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
ENST00000473683.1
CDS CCA 90 bp TGCCTAGCAGCCGGATTTCCCGCTCCACATGGACCGGCATCAACGTaGAGCCCTGAACGCTCTCCACACAGGGGCAGGAGCTTGCCCCCA +
Preference number: 5 (lower is better)
Translates to: CLAAGFPAPHGPAST*SPERSPHRGRSLPP
Trigger: TGGGGGCAAGCTCCTGCCCCTGTGTGGAGAGCGTTCAGGGCTCCACGTTGATGCCGGTCCATGTGGAGCGGGAAATCCGGCTGCTAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
ENST00000462738.1
ENST00000484485.5
CDS CCA 90 bp TCCTCAAACGTCTCCGGGACCACGCGACGCCTCCGTCCAAGCCCCTaGCTGGGCTGCAGCATTCTCGAGACCACGGTCACCCGGATTCTT +
Preference number: 5 (lower is better)
Translates to: SSNVSGTTRRLRPSP*LGCSILETTVTRIL
Trigger: AAGAATCCGGGTGACCGTGGTCTCGAGAATGCTGCAGCCCAGCCAGGGGCTTGGACGGAGGCGTCGCGTGGTCCCGGAGACGTTTGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465117.5
CDS-3UTR CAA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGATTGGCAGCCACATATaGTGTGTCCCCAGGCCGCTC +
Preference number: 5 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLIGSHI*CVPRPL
Trigger: GAGCGGCCTGGGGACACACAATATGTGGCTGCCAAT...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CCAGGCTTGTGCCGGAATGGCATGGTGGGGTCCTCAGGGTTGAGTGGCTGCAGGGCATCACACGAGGCCTaGTGGGTGCACAGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: PGLCRNGMVGSSGLSGCRASHEA*WVHRCC
Trigger: GCAGCACCTGTGCACCCACAAGGCCTCGTGTGATGC...CCTGCAGCCACTCAACCCTGAGGACCCCACCATGCCATTCCGGCACAAGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CAA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGACATGCTGGCCCAGGTaGGAGCCCCTGATGGTGACA +
Preference number: 5 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQTCWPR*EPLMVT
Trigger: TGTCACCATCAGGGGCTCCAACCTGGGCCAGCATGT...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTAGCCACCACCTCCTCCTaGGACATTGCAAGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVATTSS*DIARSR
Trigger: CCTGGACCTTGCAATGTCCAAGGAGGAGGTGGTGGC...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS GCA 90 bp GCAACCATGGGCCCAGCATCACACGAGGCCTTGTGGGTGCACAGGTaGTGCCAGACACACCAGTTACACCCCCAGCGGCTGCTCACACAG +
Preference number: 5 (lower is better)
Translates to: ATMGPASHEALWVHR*CQTHQLHPQRLLTQ
Trigger: CTGTGTGAGCAGCCGCTGGGGGTGTAACTGGTGTGTCTGGCAGCACCTGTGCACCCACAAGGCCTCGTGTGATGCTGGGCCCATGGTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
ENST00000466353.1
CDS GCA 90 bp GATGGCTTGCAACCATGGGCCCAGCATCACACGAGGCCTTGTGGGTaGACAGGTGCTGCCAGACACACCAGTTACACCCCCAGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: DGLQPWAQHHTRPCG*TGAARHTSYTPSGC
Trigger: GCAGCCGCTGGGGGTGTAACTGGTGTGTCTGGCAGCACCTGTGCACCCACAAGGCCTCGTGTGATGCTGGGCCCATGGTTGCAAGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
ENST00000466353.1
CDS GCA 90 bp TCTTCCTGCAGGCACCAAGGGCAAGGCAGTCTATGGAGCCCACCCTaGCCAGCTCAGCCCTCTGCCTTGCCAGATTCCAGAGGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: SSCRHQGQGSLWSPP*PAQPSALPDSRGKA
Trigger: GGCCTTGCCTCTGGAATCTGGCAAGGCAGAGGGCTGAGCTGGGCAGGGTGGGCTCCATAGACTGCCTTGCCCTTGGTGCCTGCAGGAAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462738.1
CDS CCA 90 bp TACGTAGTCGGCTCCTCTCGGCAGCACTGGGGCCTCACTAGGGTCTaGGGAGGGGCACATCACACCAGAACCAGTCAGCAGGGCAGGACT +
Preference number: 5 (lower is better)
Translates to: YVVGSSRQHWGLTRV*GGAHHTRTSQQGRT
Trigger: AGTCCTGCCCTGCTGACTGGTTCTGGTGTGATGTGCCCCTCCCCAGACCCTAGTGAGGCCCCAGTGCTGCCGAGAGGAGCCGACTACGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS-3UTR CAA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTACCTGTGCAGCTGCCCTaGACTATCACCCAGGAAAGC +
Preference number: 5 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVPVQLP*TITQES
Trigger: GCTTTCCTGGGTGATAGTCAAGGGCAGCTGCACAGG...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCACTGGGGCATGGCAGTTaGGCAGCGGCTGCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPLGHGS*AAAAVS
Trigger: GGAGACTGCAGCCGCTGCCAAACTGCCATGCCCCAG...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp ACACTCCCAGGCTTGTGCCGGAATGGCATGGTGGGGTCCTCAGGGTTGAGTGGCCTTGAACTGTCCGCGTaGAAGCCTCCGCTCCGTGGC +
Preference number: 5 (lower is better)
Translates to: TLPGLCRNGMVGSSGLSGLELSA*KPPLRG
Trigger: GCCACGGAGCGGAGGCTTCAACGCGGACAGTTCAAG...GCCACTCAACCCTGAGGACCCCACCATGCCATTCCGGCACAAGCCTGGGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CAA 90 bp CCCAACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGCGTGCATACAGAAGTTaGTTGATCGGGGAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: PNSLQTGVTGSLDSGSRLRAYRS*LIGESR
Trigger: CCGGGACTCCCCGATCAACAAACTTCTGTATGCACG...CAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGCTTTCCACCATCCGCTaGTACCGGGGAATGTCCCGT +
Preference number: 5 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQLSTIR*YRGMSR
Trigger: ACGGGACATTCCCCGGTACAAGCGGATGGTGGAAAG...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS TCA 90 bp GCTCAGCTGGAACAGGAAGTTGGTAGCCCCCAGGTAGAGGGTGCCTaGGGTGGGGTCCCTTGCCAGGTGCTGCAGATACGTGCCATTGGG +
Preference number: 5 (lower is better)
Translates to: AQLEQEVGSPQVEGA*GGVPCQVLQIRAIG
Trigger: CCCAATGGCACGTATCTGCAGCACCTGGCAAGGGACCCCACCTCAGGCACCCTCTACCTGGGGGCTACCAACTTCCTGTTCCAGCTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS CCA 90 bp GTCTCTGCTCACTGCAGACCCCTGCTGGATGCTCTGTGTGGAGTATaGGTGGCCATCGCTCCCTGGGCCCAAGTAGACCCTGTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: VSAHCRPLLDALCGV*VAIAPWAQVDPVQL
Trigger: CAGCTGCACAGGGTCTACTTGGGCCCAGGGAGCGATGGCCACCCATACTCCACACAGAGCATCCAGCAGGGGTCTGCAGTGAGCAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS CCA 90 bp CCCGGCCACCCCAGACCGCCACTCAACATCAAGGGTGCGAGGGTCTaGCCGCTGGGTGAGAGGCACTCCTTTATAAAGCTGGTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: PGHPRPPLNIKGARV*PLGERHSFIKLVQH
Trigger: ATGCTGGACCAGCTTTATAAAGGAGTGCCTCTCACCCAGCGGCCAGACCCTCGCACCCTTGATGTTGAGTGGCGGTCTGGGGTGGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000456774.5
ENST00000485535.5
CDS-3UTR CAA 90 bp GAGGGTCCAAGGGAACATGCCGTCTCCGGGACCACGCGACGCCTCCGTCCAAGCCTGACCGCAGGATCATaGGCAGCCACATATTGTGTG +
Preference number: 5 (lower is better)
Translates to: EGPREHAVSGTTRRLRPSLTAGS*AATYCV
Trigger: CACACAATATGTGGCTGCCAATGATCCTGCGGTCAG...GCTTGGACGGAGGCGTCGCGTGGTCCCGGAGACGGCATGTTCCCTTGGACCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CAA 90 bp TCCAGGTTCTCCCCCTCCACGGAGAACACACTCCCAGGCTTGTGCCGGAATGGCCTGGCCACTCCAGAATaGGTGTGGCTTCCAGCGGGA +
Preference number: 5 (lower is better)
Translates to: SRFSPSTENTLPGLCRNGLATPE*VWLPAG
Trigger: TCCCGCTGGAAGCCACACCAATTCTGGAGTGGCCAG...GCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAACCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CAA 90 bp GGCGTGGGCTGGTCTCACACCGCAGTTGTTCTGACTGCTGCTCCGGCAGCAAGTACATGCTGGCCCAGGTaGGAGCCCCTGATGGTGACA +
Preference number: 5 (lower is better)
Translates to: GVGWSHTAVVLTAAPAASTCWPR*EPLMVT
Trigger: TGTCACCATCAGGGGCTCCAACCTGGGCCAGCATGT...ACTTGCTGCCGGAGCAGCAGTCAGAACAACTGCGGTGTGAGACCAGCCCACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS TCA 90 bp GCAGGAGTCTCTGCTCTGGCACAAGTGTCCGAGCTGCATGGTGGCTaGGGGCTTAGAAGTTTGGAGGGCCTGACCCTCCCTGGACAGGAG +
Preference number: 5 (lower is better)
Translates to: AGVSALAQVSELHGG*GLRSLEGLTLPGQE
Trigger: CTCCTGTCCAGGGAGGGTCAGGCCCTCCAAACTTCTAAGCCCTCAGCCACCATGCAGCTCGGACACTTGTGCCAGAGCAGAGACTCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461261.1
CDS GCA 90 bp AAAGGCACTCACGAAGTGGTGGCTGTACTCGGAGAGGCGGCCCACTaGCAGCTTGGCTGTCTCCTCATAGGAGAAGGCAGCTTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: KGTHEVVAVLGEAAH*QLGCLLIGEGSLGV
Trigger: GACCCCCAAGCTGCCTTCTCCTATGAGGAGACAGCCAAGCTGGCAGTGGGCCGCCTCTCCGAGTACAGCCACCACTTCGTGAGTGCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS GCA 90 bp CTCGTCAGAAAGAATGAGGTGCCCGGCCACCCCAGACCGCCACTCTaGAAGGGCAAGGCAGAACTGGGTGCAGGGCTGGAAGATACCCTT +
Preference number: 5 (lower is better)
Translates to: LVRKNEVPGHPRPPL*KGKAELGAGLEDTL
Trigger: AAGGGTATCTTCCAGCCCTGCACCCAGTTCTGCCTTGCCCTTGCAGAGTGGCGGTCTGGGGTGGCCGGGCACCTCATTCTTTCTGACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470525.1
CDS CCA 90 bp AAGGTCCCATCAAAGGTGAGGTCTCTGCTCACTGCAGACCCCTGCTaGATGCTCTGTGTGGAGTATGGGTGGCCATCGCTCCCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: KVPSKVRSLLTADPC*MLCVEYGWPSLPGP
Trigger: GGGCCCAGGGAGCGATGGCCACCCATACTCCACACAGAGCATCCAGCAGGGGTCTGCAGTGAGCAGAGACCTCACCTTTGATGGGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS CCA 90 bp AGAACGGCGACTGCACCTGCCAAGGAGCACGCACCACCCACAGTATaGGTCCCTGTGAGCAAGGCAAGATGCACAGTCCAGGTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: RTATAPAKEHAPPTV*VPVSKARCTVQVLS
Trigger: GCTCAGCACCTGGACTGTGCATCTTGCCTTGCTCACAGGGACCCATACTGTGGGTGGTGCGTGCTCCTTGGCAGGTGCAGTCGCCGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS CCA 90 bp CCAGGGGCTCTCCACGCCCTCACCAACATCAAGGGTGCGAGGGTCTaGCCGCTGGGTGAGAGGCACTCCTTTATAAAGCTGGTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: PGALHALTNIKGARV*PLGERHSFIKLVQH
Trigger: ATGCTGGACCAGCTTTATAAAGGAGTGCCTCTCACCCAGCGGCCAGACCCTCGCACCCTTGATGTTGGTGAGGGCGTGGAGAGCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470525.1
CDS CCA 90 bp GTGGAGCCCATCTCCTCCTCCACAGGGACACCAGCCCCTCCATCATaGGGCAGCCTTACTCAACCTCTCCAAAGACCAAGAGCAGGGACC +
Preference number: 5 (lower is better)
Translates to: VEPISSSTGTPAPPS*GSLTQPLQRPRAGT
Trigger: GGTCCCTGCTCTTGGTCTTTGGAGAGGTTGAGTAAGGCTGCCCCATGATGGAGGGGCTGGTGTCCCTGTGGAGGAGGAGATGGGCTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470525.1
CDS-3UTR CAA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCGGTTCCAGGTCCATTTaGGGGGCTGGGAGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSGSRSI*GAGRGG
Trigger: CCCTCCCCTCCCAGCCCCCAAAATGGACCTGGAACC...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCCTGGGGCATGGCAGTTaGGCAGCGGCTGCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSLGHGS*AAAAVS
Trigger: GGAGACTGCAGCCGCTGCCAAACTGCCATGCCCCAG...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCACGGTCACCCGGATTCTaGGCGTCTGTACCACGTCCA +
Preference number: 5 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPRSPGF*ASVPRP
Trigger: TGGACGTGGTACAGACGCCAAGAATCCGGGTGACCG...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TCCAGGTTCTCCCCCTCCACGGAGAACACACTCCCAGGCTTGTGCCGGAATGGCCCTCCTCCTTGGACATaGCAAGGTCCAGGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: SRFSPSTENTLPGLCRNGPPPWT*QGPGSP
Trigger: GGGAGAACCTGGACCTTGCAATGTCCAAGGAGGAGG...GCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAACCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CAA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGGCATACAGAAGTTTGTaGATCGGGGAGTCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: QIALTMATYEAGQPCGSQAYRSL*IGESRP
Trigger: GGGCCGGGACTCCCCGATCAACAAACTTCTGTATGC...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS GCA 90 bp AGACCCTGGACCTCAGAAGTGACATCCTCGTCAGAAAGAATGAGGTaGCCGGCCACCCCAGACCGCCACTCAACATCAAGGGTGCGAGGG +
Preference number: 5 (lower is better)
Translates to: RPWTSEVTSSSERMR*PATPDRHSTSRVRG
Trigger: CCCTCGCACCCTTGATGTTGAGTGGCGGTCTGGGGTGGCCGGGCACCTCATTCTTTCTGACGAGGATGTCACTTCTGAGGTCCAGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000456774.5
ENST00000485535.5
CDS GCA 90 bp AGACCCTGGACCTCAGAAGTGACATCCTCGTCAGAAAGAATGAGGTaGCCGGCCACCCCAGACCGCCACTCTGCAAGGGCAAGGCAGAAC +
Preference number: 5 (lower is better)
Translates to: RPWTSEVTSSSERMR*PATPDRHSARARQN
Trigger: GTTCTGCCTTGCCCTTGCAGAGTGGCGGTCTGGGGTGGCCGGGCACCTCATTCTTTCTGACGAGGATGTCACTTCTGAGGTCCAGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470525.1
CDS GCA 90 bp AAGGGGCAGTGTGAAGGGGGAAGGACCGTTGTGGCAGGAGGCCTATaGCCAACCCAAGAAGCAGAGGGAGGCCTTACCCAGGACAGTTCA +
Preference number: 5 (lower is better)
Translates to: KGQCEGGRTVVAGGL*PTQEAEGGLTQDSS
Trigger: TGAACTGTCCTGGGTAAGGCCTCCCTCTGCTTCTTGGGTTGGGCATAGGCCTCCTGCCACAACGGTCCTTCCCCCTTCACACTGCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497627.1
CDS-3UTR CAA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACGCATCACACGAGGCCTaGTGGGTGCACAGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYASHEA*WVHRCC
Trigger: GCAGCACCTGTGCACCCACAAGGCCTCGTGTGATGC...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCGGCTGGGTCCACCTCTaGCAGGAGGGTCTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: SACQSLQAPKKVASPPSFGWVHL*QEGLGR
Trigger: TCTCCCCAGACCCTCCTGCAAGAGGTGGACCCAGCC...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCGGCTGGGTCCACCTCTaGCAGGAGGGTCTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKAGWVHL*QEGLGR
Trigger: TCTCCCCAGACCCTCCTGCAAGAGGTGGACCCAGCC...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTCTTGAACTGTCCGCGTaGAAGCCTCCGCTCCGTGGC +
Preference number: 5 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSLELSA*KPPLRG
Trigger: GCCACGGAGCGGAGGCTTCAACGCGGACAGTTCAAG...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp GGCGTCTGTACCACGTCCAGATTCTGGCCACGGACGCATATCTCACGTCCTCCAGCACGGCTCCTCAAATaGCTGGCTACTGCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: GVCTTSRFWPRTHISRPPARLLK*LATAGG
Trigger: CCCTCCTGCAGTAGCCAGCAATTTGAGGAGCCGTGC...TGGAGGACGTGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAGACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CAA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACGAGCTGCCCCAGCCCTaGCTCCACAGTGGGCCGTCT +
Preference number: 5 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYELPQP*LHSGPS
Trigger: AGACGGCCCACTGTGGAGCAAGGGCTGGGGCAGCTC...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTATGGCCCCTTATCCACTaGGTGCTTAATCCCTCGAAA +
Preference number: 5 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVWPLIH*VLNPSK
Trigger: TTTCGAGGGATTAAGCACCAAGTGGATAAGGGGCCA...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTATCGTTCAAGGTGTATTaGGCCTTGCCTGTCACACTG +
Preference number: 5 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVSFKVY*ALPVTL
Trigger: CAGTGTGACAGGCAAGGCCAAATACACCTTGAACGA...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTATCTCTGAGCAGGCGGTaGTCGTTCAAGGTGTATTTG +
Preference number: 5 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVSLSRR*SFKVYL
Trigger: CAAATACACCTTGAACGACAACCGCCTGCTCAGAGA...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTGAGTCCCGGCCCAGCTaGTGGTCGGCCAGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: PSTNSACQSLQAPKKVASESRPS*WSARVQ
Trigger: CTGCACCCTGGCCGACCACAAGCTGGGCCGGGACTC...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS TCA 90 bp CATAGAAAGAGAGGGAAGTTTTGGCGATCACAACAGCGCCAAATCTaGGCTCCACGCTCACGGATACGTAGTCACCCGGCCGGGCCCCGC +
Preference number: 5 (lower is better)
Translates to: HRKRGKFWRSQQRQI*APRSRIRSHPAGPR
Trigger: GCGGGGCCCGGCCGGGTGACTACGTATCCGTGAGCGTGGAGCTCAGATTTGGCGCTGTTGTGATCGCCAAAACTTCCCTCTCTTTCTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466353.1
CDS GCA 90 bp TCAAAGGTCCCATCAAAGGTGAGGTCTCTGCTCACTGCAGACCCCTaGTGGATGCTCTGTGTGGAGTATGGGTGGCCATCGCTCCCTGGG +
Preference number: 5 (lower is better)
Translates to: SKVPSKVRSLLTADP*WMLCVEYGWPSLPG
Trigger: CCCAGGGAGCGATGGCCACCCATACTCCACACAGAGCATCCAGCAGGGGTCTGCAGTGAGCAGAGACCTCACCTTTGATGGGACCTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS-3UTR CAA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCTGAGGTGGGGTCCCTaGCCAGGTGCTGCAGATACG +
Preference number: 5 (lower is better)
Translates to: SACQSLQAPKKVASPPSFLRWGP*PGAADT
Trigger: CGTATCTGCAGCACCTGGCAAGGGACCCCACCTCAG...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACCTGGCCACTCCAGAATaGGTGTGGCTTCCAGCGGGA +
Preference number: 5 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYLATPE*VWLPAG
Trigger: TCCCGCTGGAAGCCACACCAATTCTGGAGTGGCCAG...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CGCAAGTTCCCCATCTGCACCGTGAACTCAGGCAAAGAGTCAGGTGCCTCTCGGCCTGTGCAGCTGCCCTaGACTATCACCCAGGAAAGC +
Preference number: 5 (lower is better)
Translates to: RKFPICTVNSGKESGASRPVQLP*TITQES
Trigger: GCTTTCCTGGGTGATAGTCAAGGGCAGCTGCACAGG...CCGAGAGGCACCTGACTCTTTGCCTGAGTTCACGGTGCAGATGGGGAACTTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CAA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCGCGGGCTCTGATGGCTaGCAACCATGGGCCCAGCAT +
Preference number: 5 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKAAGSDG*QPWAQH
Trigger: ATGCTGGGCCCATGGTTGCAAGCCATCAGAGCCCGC...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TTCTCCCCCTCCACGGAGAACACACTCCCAGGCTTGTGCCGGAATGGCATGGTGTCCATCACACACTCATaGTCTCCTGGGCCATCCTGG +
Preference number: 5 (lower is better)
Translates to: FSPSTENTLPGLCRNGMVSITHS*SPGPSW
Trigger: CCAGGATGGCCCAGGAGACAATGAGTGTGTGATGGA...CACCATGCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CAA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTCGCCCAGTCAGGAGCTaGGAGCCATTCAGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSRPVRS*EPFRVR
Trigger: TCTCACCCTGAATGGCTCCAAGCTCCTGACTGGGCG...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp GAACAGTCATACAGTACCACATGCAGCCCCTCAGCACTGTCCACACGCAGACGGCGCCCAGTCAGGAGCTaGGAGCCATTCAGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: EQSYSTTCSPSALSTRRRRPVRS*EPFRVR
Trigger: TCTCACCCTGAATGGCTCCAAGCTCCTGACTGGGCG...CCGTCTGCGTGTGGACAGTGCTGAGGGGCTGCATGTGGTACTGTATGACTGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CAA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCCGGTCACCCGGATTCTaGGCGTCTGTACCACGTCCA +
Preference number: 5 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSRSPGF*ASVPRP
Trigger: TGGACGTGGTACAGACGCCAAGAATCCGGGTGACCG...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTGCACGGCTCCTCAAATaGCTGGCTACTGCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSARLLK*LATAGG
Trigger: CCCTCCTGCAGTAGCCAGCAATTTGAGGAGCCGTGC...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCACGTGCATACAGAAGTTaGTTGATCGGGGAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPRAYRS*LIGESR
Trigger: CCGGGACTCCCCGATCAACAAACTTCTGTATGCACG...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS TCA 90 bp CCACGCCCTCACCAACATCAAGGGTGCGAGGGTCTGGCCGCTGGGTaGGAGGCACTCCTTTATAAAGCTGGTCCAGCATCTTCTCCTTTG +
Preference number: 5 (lower is better)
Translates to: PRPHQHQGCEGLAAG*EALLYKAGPASSPL
Trigger: CAAAGGAGAAGATGCTGGACCAGCTTTATAAAGGAGTGCCTCTCACCCAGCGGCCAGACCCTCGCACCCTTGATGTTGGTGAGGGCGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470525.1
CDS CCA 90 bp ACCACGGTCACCCGGATTCTTGGCGTCTGTACCACGTCCAGATTCTaGCCACGGACGCATATCTCACGTCCTCCACTGAAACAGACCGTG +
Preference number: 5 (lower is better)
Translates to: TTVTRILGVCTTSRF*PRTHISRPPLKQTV
Trigger: CACGGTCTGTTTCAGTGGAGGACGTGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAGACGCCAAGAATCCGGGTGACCGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467913.1
CDS-3UTR CAA 90 bp GAACAGTCATACAGTACCACATGCAGCCCCTCAGCACTGTCCACACGCAGACGGATTGGCAGCCACATATaGTGTGTCCCCAGGCCGCTC +
Preference number: 5 (lower is better)
Translates to: EQSYSTTCSPSALSTRRRIGSHI*CVPRPL
Trigger: GAGCGGCCTGGGGACACACAATATGTGGCTGCCAAT...CCGTCTGCGTGTGGACAGTGCTGAGGGGCTGCATGTGGTACTGTATGACTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CAA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGAAAGAGAGGGAAGTTTaGGCGATCACAACAGCGCCA +
Preference number: 5 (lower is better)
Translates to: QIALTMATYEAGQPCGSQKEREV*AITTAP
Trigger: TGGCGCTGTTGTGATCGCCAAAACTTCCCTCTCTTT...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACGCGGGCTCTGATGGCTaGCAACCATGGGCCCAGCAT +
Preference number: 5 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYAGSDG*QPWAQH
Trigger: ATGCTGGGCCCATGGTTGCAAGCCATCAGAGCCCGC...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTGGTTCCAGGTCCATTTaGGGGGCTGGGAGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: PSTNSACQSLQAPKKVASGSRSI*GAGRGG
Trigger: CCCTCCCCTCCCAGCCCCCAAAATGGACCTGGAACC...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCACATGCTGGCCCAGGTaGGAGCCCCTGATGGTGACA +
Preference number: 5 (lower is better)
Translates to: SACQSLQAPKKVASPPSFTCWPR*EPLMVT
Trigger: TGTCACCATCAGGGGCTCCAACCTGGGCCAGCATGT...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACCTTGAACTGTCCGCGTaGAAGCCTCCGCTCCGTGGC +
Preference number: 5 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYLELSA*KPPLRG
Trigger: GCCACGGAGCGGAGGCTTCAACGCGGACAGTTCAAG...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCACCAGCAGAGGTGATGTaGGGGTCCAAGGTATACTTG +
Preference number: 5 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPPAEVM*GSKVYL
Trigger: CAAGTATACCTTGGACCCCAACATCACCTCTGCTGG...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TTCTCCCCCTCCACGGAGAACACACTCCCAGGCTTGTGCCGGAATGGCATGGTGCCAGCAGAGGTGATGTaGGGGTCCAAGGTATACTTG +
Preference number: 5 (lower is better)
Translates to: FSPSTENTLPGLCRNGMVPAEVM*GSKVYL
Trigger: CAAGTATACCTTGGACCCCAACATCACCTCTGCTGG...CACCATGCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CAA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACATGAGCTGGGAGGAGTaGACATGGCACGGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYMSWEE*TWHGSS
Trigger: TGAGGAGCCGTGCCATGTCAACTCCTCCCAGCTCAT...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CAGATAGCCCTCACCATGGCTACCTATGAGGCAGGGCAGCCCTGTGGCAGCCAGTCTCTGAGCAGGCGGTaGTCGTTCAAGGTGTATTTG +
Preference number: 5 (lower is better)
Translates to: QIALTMATYEAGQPCGSQSLSRR*SFKVYL
Trigger: CAAATACACCTTGAACGACAACCGCCTGCTCAGAGA...CTGGCTGCCACAGGGCTGCCCTGCCTCATAGGTAGCCATGGTGAGGGCTATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTGCTCCGGCTCATCACTaGGCTTCACCAGGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSAPAHH*ASPGAR
Trigger: CCTGGCACCTGGTGAAGCCAAGTGATGAGCCGGAGC...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGGCTCCGGCTCATCACTaGGCTTCACCAGGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: TNSACQSLQAPKKVASPPAPAHH*ASPGAR
Trigger: CCTGGCACCTGGTGAAGCCAAGTGATGAGCCGGAGC...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCACTCAGAGGCAAGCTGTaGGTCTTCCAGATGTGGATG +
Preference number: 5 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPLRGKL*VFQMWM
Trigger: CATCCACATCTGGAAGACCAACAGCTTGCCTCTGAG...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTGCATACAGAAGTTTGTaGATCGGGGAGTCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSAYRSL*IGESRP
Trigger: GGGCCGGGACTCCCCGATCAACAAACTTCTGTATGC...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS TCA 90 bp CAGACCGCCACTCAACATCAAGGGTGCGAGGGTCTGGCCGCTGGGTaGGAGGCACTCCTTTATAAAGCTGGTCCAGCATCTTCTCCTTTG +
Preference number: 5 (lower is better)
Translates to: QTATQHQGCEGLAAG*EALLYKAGPASSPL
Trigger: CAAAGGAGAAGATGCTGGACCAGCTTTATAAAGGAGTGCCTCTCACCCAGCGGCCAGACCCTCGCACCCTTGATGTTGAGTGGCGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000456774.5
ENST00000485535.5
CDS-3UTR CAA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACGAACTCCAAGGCGCCTaGTTTCTCCCCTGCGCACCT +
Preference number: 5 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNELQGA*FLPCAP
Trigger: AGGTGCGCAGGGGAGAAACAAGGCGCCTTGGAGTTC...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296440.11
CDS-3UTR CAA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCATTGGCAGCCACATATaGTGTGTCCCCAGGCCGCTC +
Preference number: 5 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKAIGSHI*CVPRPL
Trigger: GAGCGGCCTGGGGACACACAATATGTGGCTGCCAAT...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TTCTCCCCCTCCACGGAGAACACACTCCCAGGCTTGTGCCGGAATGGCATGGTGAAAGAGAGGGAAGTTTaGGCGATCACAACAGCGCCA +
Preference number: 5 (lower is better)
Translates to: FSPSTENTLPGLCRNGMVKEREV*AITTAP
Trigger: TGGCGCTGTTGTGATCGCCAAAACTTCCCTCTCTTT...CACCATGCCATTCCGGCACAAGCCTGGGAGTGTGTTCTCCGTGGAGGGGGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CAA 90 bp GGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCCATCACACACTCATaGTCTCCTGGGCCATCCTGG +
Preference number: 5 (lower is better)
Translates to: GVQLLDLGCGSSNKARGSSITHS*SPGPSW
Trigger: CCAGGATGGCCCAGGAGACAATGAGTGTGTGATGGA...GCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACTCCATCACACACTCATaGTCTCCTGGGCCATCCTGG +
Preference number: 5 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYSITHS*SPGPSW
Trigger: CCAGGATGGCCCAGGAGACAATGAGTGTGTGATGGA...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGCGCCCAGTCAGGAGCTaGGAGCCATTCAGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: TNSACQSLQAPKKVASPPRPVRS*EPFRVR
Trigger: TCTCACCCTGAATGGCTCCAAGCTCCTGACTGGGCG...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGGCACGGCTCCTCAAATaGCTGGCTACTGCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: TNSACQSLQAPKKVASPPARLLK*LATAGG
Trigger: CCCTCCTGCAGTAGCCAGCAATTTGAGGAGCCGTGC...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAGGCCAGAAGTCAAAGACCAGGTaGTCAAGGATAAATTCCACC +
Preference number: 5 (lower is better)
Translates to: QAPKKVASPPSFQGCPGQKSKTR*SRINST
Trigger: GGTGGAATTTATCCTTGACAACCTGGTCTTTGACTT...CTGGCCTGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTAAAGTCAAAGACCAGGTaGTCAAGGATAAATTCCACC +
Preference number: 5 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVKSKTR*SRINST
Trigger: GGTGGAATTTATCCTTGACAACCTGGTCTTTGACTT...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CAGGCCTCCCGGGTCACACAACGTGGACGCTCCCCCTCACACCACACACAGCCAAAGTCAAAGACCAGGTaGTCAAGGATAAATTCCACC +
Preference number: 5 (lower is better)
Translates to: QASRVTQRGRSPSHHTQPKSKTR*SRINST
Trigger: GGTGGAATTTATCCTTGACAACCTGGTCTTTGACTT...TGGCTGTGTGTGGTGTGAGGGGGAGCGTCCACGTTGTGTGACCCGGGAGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CAA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACCTCCTCCTTGGACATaGCAAGGTCCAGGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: PEPPGDWESPSTNSACQSPPPWT*QGPGSP
Trigger: GGGAGAACCTGGACCTTGCAATGTCCAAGGAGGAGG...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCAGGGCTGCCCAAAGGTGTATTTGGCCTaGCCTGTCACACTGTCCACT +
Preference number: 5 (lower is better)
Translates to: SLQAPKKVASPPSFQGCPKVYLA*PVTLST
Trigger: AGTGGACAGTGTGACAGGCAAGGCCAAATACACCTT...TGGGCAGCCCTGGAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACCTACATCCTCCAGCATaGGGGTCCGCTCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNLHPPA*GSALQG
Trigger: TCCCTGGAGAGCGGACCCCAATGCTGGAGGATGTAG...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp ACTCCCTGCAGACCGGTGTCACAGGGTCGCTGGACTCGGGGAGCAGGCTGGGTACATGTTATCAGATGTTaGCACGTCGAACACAAACTG +
Preference number: 5 (lower is better)
Translates to: TPCRPVSQGRWTRGAGWVHVIRC*HVEHKL
Trigger: CAGTTTGTGTTCGACGTGCAAACATCTGATAACATG...TACCCAGCCTGCTCCCCGAGTCCAGCGACCCTGTGACACCGGTCTGCAGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCCTTTCCACCATCCGCTaGTACCGGGGAATGTCCCGT +
Preference number: 5 (lower is better)
Translates to: SACQSLQAPKKVASPPSFLSTIR*YRGMSR
Trigger: ACGGGACATTCCCCGGTACAAGCGGATGGTGGAAAG...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS GCA 90 bp ATACAGGTGCTCAAAGGTCCCATCAAAGGTGAGGTCTCTGCTCACTaGAGACCCCTGCTGGATGCTCTGTGTGGAGTATGGGTGGCCATC +
Preference number: 5 (lower is better)
Translates to: IQVLKGPIKGEVSAH*RPLLDALCGVWVAI
Trigger: GATGGCCACCCATACTCCACACAGAGCATCCAGCAGGGGTCTGCAGTGAGCAGAGACCTCACCTTTGATGGGACCTTTGAGCACCTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS GCA 90 bp TGCATAGTACCTTTCCACCATCCGCTTGTACCGGGGAATGTCCCGTaGATACAGAAGTTTGTTGATCGGGGAGTCCCGGCCCAGCTTGTG +
Preference number: 5 (lower is better)
Translates to: CIVPFHHPLVPGNVP*IQKFVDRGVPAQLV
Trigger: CACAAGCTGGGCCGGGACTCCCCGATCAACAAACTTCTGTATGCACGGGACATTCCCCGGTACAAGCGGATGGTGGAAAGGTACTATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000456774.5
ENST00000485535.5
ENST00000497627.1
CDS-3UTR CAA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACCCTGTGCAGCTGCCCTaGACTATCACCCAGGAAAGC +
Preference number: 5 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYPVQLP*TITQES
Trigger: GCTTTCCTGGGTGATAGTCAAGGGCAGCTGCACAGG...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACCCAGCAGAGGTGATGTaGGGGTCCAAGGTATACTTG +
Preference number: 5 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYPAEVM*GSKVYL
Trigger: CAAGTATACCTTGGACCCCAACATCACCTCTGCTGG...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACATGAGCTGGGAGGAGTaGACATGGCACGGCTCCTCA +
Preference number: 5 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNMSWEE*TWHGSS
Trigger: TGAGGAGCCGTGCCATGTCAACTCCTCCCAGCTCAT...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCAGAGGCAGCTCAACCCTCCTCCTTGGACATaGCAAGGTCCAGGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: STLRPRMWQQQQGQRQLNPPPWT*QGPGSP
Trigger: GGGAGAACCTGGACCTTGCAATGTCCAAGGAGGAGG...GTTGAGCTGCCTCTGGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGCGTGTGGATGAACTaGGTGAGGAAGAGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYSVWMN*VRKSLL
Trigger: CAGCAAGCTCTTCCTCACCAAGTTCATCCACACGCT...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCATCAGCTTGGGGTTCTaGGCCACATACTGGGCAACC +
Preference number: 5 (lower is better)
Translates to: SACQSLQAPKKVASPPSFISLGF*ATYWAT
Trigger: GGTTGCCCAGTATGTGGCCAAGAACCCCAAGCTGAT...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCTACATCCTCCAGCATaGGGGTCCGCTCTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: PSTNSACQSLQAPKKVASLHPPA*GSALQG
Trigger: TCCCTGGAGAGCGGACCCCAATGCTGGAGGATGTAG...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCAGACAGAGTTCATCTCTaGGTCGCTGGCTGGGACAGT +
Preference number: 5 (lower is better)
Translates to: PEPPGDWESPSTNSACQSDRVHL*VAGWDS
Trigger: ACTGTCCCAGCCAGCGACCAAGAGATGAACTCTGTC...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGAGCTTCGACAGAGTTCATCTCTaGGTCGCTGGCTGGGACAGT +
Preference number: 5 (lower is better)
Translates to: SACQSLQAPKKVASPPSFDRVHL*VAGWDS
Trigger: ACTGTCCCAGCCAGCGACCAAGAGATGAACTCTGTC...GAAGCTCGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS TCA 90 bp GATAAGCATCCAGGGTGTCCACTGGCAGCTGTGCACAGTCAGAATTaGCATCATACTCGATGTAGGCCACCTCGGTCCCATCCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: DKHPGCPLAAVHSQN*HHTRCRPPRSHPQH
Trigger: GTGCTGAGGATGGGACCGAGGTGGCCTACATCGAGTATGATGTCAATTCTGACTGTGCACAGCTGCCAGTGGACACCCTGGATGCTTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS TCA 90 bp CATAGAAAGAGAGGGAAGTTTTGGCGATCACAACAGCGCCAAATCTaGGCTCCACGCTCACGGATACGTAGTCGGCTCCTCTCGGCAGCA +
Preference number: 5 (lower is better)
Translates to: HRKRGKFWRSQQRQI*APRSRIRSRLLSAA
Trigger: TGCTGCCGAGAGGAGCCGACTACGTATCCGTGAGCGTGGAGCTCAGATTTGGCGCTGTTGTGATCGCCAAAACTTCCCTCTCTTTCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS TCA 90 bp TACTCAACCTCTCCAAAGACCAAGAGCAGGGACCCCCTCCCCAGATaGGAGGCTGTCCAAGAAAGATGTTCCAAAGCCAGCTTCTGCCTG +
Preference number: 5 (lower is better)
Translates to: YSTSPKTKSRDPLPR*EAVQERCSKASFCL
Trigger: CAGGCAGAAGCTGGCTTTGGAACATCTTTCTTGGACAGCCTCTCATCTGGGGAGGGGGTCCCTGCTCTTGGTCTTTGGAGAGGTTGAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470525.1
CDS-3UTR CAA 90 bp CTCCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTAAAGAGAGGGAAGTTTaGGCGATCACAACAGCGCCA +
Preference number: 5 (lower is better)
Translates to: LLLPLRIPVWPRPVFRNSKEREV*AITTAP
Trigger: TGGCGCTGTTGTGATCGCCAAAACTTCCCTCTCTTT...ACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CCAGAGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTCAGAGGCAAGCTGTaGGTCTTCCAGATGTGGATG +
Preference number: 5 (lower is better)
Translates to: PEPPGDWESPSTNSACQSLRGKL*VFQMWM
Trigger: CATCCACATCTGGAAGACCAACAGCTTGCCTCTGAG...TGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS GCA 90 bp GCCACAGGAACCTTCAGAAGTGTGCTCTGGGTCATGACATACAGGTaGTCAAAGGTCCCATCAAAGGTGAGGTCTCTGCTCACTGCAGAC +
Preference number: 5 (lower is better)
Translates to: ATGTFRSVLWVMTYR*SKVPSKVRSLLTAD
Trigger: GTCTGCAGTGAGCAGAGACCTCACCTTTGATGGGACCTTTGAGCACCTGTATGTCATGACCCAGAGCACACTTCTGAAGGTTCCTGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS GCA 90 bp CACAGCCACTTTCATGTGTTTCCATGTCGTCCCTGGCTGCCTTTGTaGCACAGTGGCAAAGCTGAGTTGTTGAACAGAGACCACTTGGCC +
Preference number: 5 (lower is better)
Translates to: HSHFHVFPCRPWLPL*HSGKAELLNRDHLA
Trigger: GGCCAAGTGGTCTCTGTTCAACAACTCAGCTTTGCCACTGTGGCACAAAGGCAGCCAGGGACGACATGGAAACACATGAAAGTGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473996.1
ENST00000485535.5
CDS-3UTR CAA 90 bp TTGGTGGGGCCAGCAGAGGTGATGTTGGGGTCCAAGGTATACTTGAACTGTCCGTGCAGATACGTGCCATaGGGAGTGAATGCAGTTGGT +
Preference number: 5 (lower is better)
Translates to: LVGPAEVMLGSKVYLNCPCRYVP*GVNAVG
Trigger: ACCAACTGCATTCACTCCCAATGGCACGTATCTGCA...CGGACAGTTCAAGTATACCTTGGACCCCAACATCACCTCTGCTGGCCCCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449094.5
CDS-3UTR CAA 90 bp ACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTCCTCCGCTGACCGCAGGATCATaGGCAGCCACATATTGTGTG +
Preference number: 5 (lower is better)
Translates to: TNSACQSLQAPKKVASPPLTAGS*AATYCV
Trigger: CACACAATATGTGGCTGCCAATGATCCTGCGGTCAG...CGGAGGAGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTATCAGCTTGGGGTTCTaGGCCACATACTGGGCAACC +
Preference number: 5 (lower is better)
Translates to: PSTNSACQSLQAPKKVASISLGF*ATYWAT
Trigger: GGTTGCCCAGTATGTGGCCAAGAACCCCAAGCTGAT...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CCTAGGAGAGGCGTTCAACTCTTAGACCTAGGATGTGGCAGCAGCAACAAGGCCTCGTTCAAGGTGTATTaGGCCTTGCCTGTCACACTG +
Preference number: 5 (lower is better)
Translates to: PRRGVQLLDLGCGSSNKASFKVY*ALPVTL
Trigger: CAGTGTGACAGGCAAGGCCAAATACACCTTGAACGA...GGCCTTGTTGCTGCTGCCACATCCTAGGTCTAAGAGTTGAACGCCTCTCCTAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp AGCCACCAGGAGACTGGGAGTCACCTTCCACTAACTCTGCTTGTCAGTCACTACTGCAGATACGTGCCATaGGGAGTGAATGCAGTTGGT +
Preference number: 5 (lower is better)
Translates to: SHQETGSHLPLTLLVSHYCRYVP*GVNAVG
Trigger: ACCAACTGCATTCACTCCCAATGGCACGTATCTGCA...GTAGTGACTGACAAGCAGAGTTAGTGGAAGGTGACTCCCAGTCTCCTGGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTTGGCCCCTTATCCACTaGGTGCTTAATCCCTCGAAA +
Preference number: 5 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSWPLIH*VLNPSK
Trigger: TTTCGAGGGATTAAGCACCAAGTGGATAAGGGGCCA...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTAAGGTGTATTTGGCCTaGCCTGTCACACTGTCCACT +
Preference number: 5 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSKVYLA*PVTLST
Trigger: AGTGGACAGTGTGACAGGCAAGGCCAAATACACCTT...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACTATAGATCTGTGACCTaGTTTTCCACAGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYYRSVT*FSTAAA
Trigger: TGCAGCTGCTGTGGAAAACAAGGTCACAGATCTATA...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CCTTCCACTAACTCTGCTTGTCAGTCACTACAGGCACCTAAGAAGGTGGCCTCTTGCAGATACGTGCCATaGGGAGTGAATGCAGTTGGT +
Preference number: 5 (lower is better)
Translates to: PSTNSACQSLQAPKKVASCRYVP*GVNAVG
Trigger: ACCAACTGCATTCACTCCCAATGGCACGTATCTGCA...AGAGGCCACCTTCTTAGGTGCCTGTAGTGACTGACAAGCAGAGTTAGTGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS-3UTR CAA 90 bp CCTCCTTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACCATGTTATCAGATGTTaGCACGTCGAACACAAACTG +
Preference number: 5 (lower is better)
Translates to: PPSSPNPSVAKASVQEQYHVIRC*HVEHKL
Trigger: CAGTTTGTGTTCGACGTGCAAACATCTGATAACATG...GTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS TCA 90 bp GTCGTCCCTGGCTGCCTTTGTGCCACAGTGGCAAAGCTGAGTTGTTaGACAGAGACCACTTGGCCTGCAAAGCGAAAATATTTACTCTCT +
Preference number: 5 (lower is better)
Translates to: VVPGCLCATVAKLSC*TETTWPAKRKYLLS
Trigger: AGAGAGTAAATATTTTCGCTTTGCAGGCCAAGTGGTCTCTGTTCAACAACTCAGCTTTGCCACTGTGGCACAAAGGCAGCCAGGGACGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473996.1
ENST00000485535.5
CDS TCA 90 bp GTTTCCATGTCGTCCCTGGCTGCCTTTGTGCCACAGTGGCAAAGCTaGGTTGTTGAACAGAGACCACTTGGCCTGCAAAGCGAAAATATT +
Preference number: 5 (lower is better)
Translates to: VSMSSLAAFVPQWQS*VVEQRPLGLQSENI
Trigger: AATATTTTCGCTTTGCAGGCCAAGTGGTCTCTGTTCAACAACTCAGCTTTGCCACTGTGGCACAAAGGCAGCCAGGGACGACATGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473996.1
ENST00000485535.5
CDS-3UTR CAA 90 bp TTCCTCTCCGAATCCCAGTGTGGCCAAGGCCAGTGTTCAGGAACAGTACAGTCTTATAGATCTGTGACCTaGTTTTCCACAGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: FLSESQCGQGQCSGTVQSYRSVT*FSTAAA
Trigger: TGCAGCTGCTGTGGAAAACAAGGTCACAGATCTATA...AGACTGTACTGTTCCTGAACACTGGCCTTGGCCACACTGGGATTCGGAGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS TCA 90 bp ATAAGATTGACAGAGACCCTCTCTCACTTTGGAGGGAATTCTTTATaGCACATCAGAAGGCCTTGGTATCTGAGAATTAATATTTGTGGC +
Preference number: 5 (lower is better)
Translates to: IRLTETLSHFGGNSL*HIRRPWYLRINICG
Trigger: GCCACAAATATTAATTCTCAGATACCAAGGCCTTCTGATGTGTCATAAAGAATTCCCTCCAAAGTGAGAGAGGGTCTCTGTCAATCTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464294.1
CDS GCA 72 bp TGGCCTTGGCGCGCTCACGCTCCCCGCCCCGAAGGCTaGCCCTCCGAGGCCTGGGCGGCTCCGGCTCATCAC +
Preference number: 6 (lower is better)
Translates to: WPWRAHAPRPEG*PSEAWAAPAHH
Trigger: GTGATGAGCCGGAGCCGCCCAGGCCTCGGAGGGGCAGCCTTCGGGGCGGGGAGCGTGAGCGCGCCAAGGCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000456774.5
ENST00000478171.1
ENST00000485535.5
CDS TCA 72 bp ACTCGTCCGCCTCGGGCAGCTCGCCGCCTTCTCTCGTaGGCCAGTCCAGGGCGGGCTTCACGGAGCCCATGG +
Preference number: 6 (lower is better)
Translates to: TRPPRAARRLLS*ASPGRASRSPW
Trigger: CCATGGGCTCCGTGAAGCCCGCCCTGGACTGGCTCACGAGAGAAGGCGGCGAGCTGCCCGAGGCGGACGAGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS TCA 72 bp ACCTGGCAGGGCCGGCTGGATCAGGAGACAACAGCATaGCCCGTGTGGGAGTCACCACCCGGCCGGGCCCCG +
Preference number: 6 (lower is better)
Translates to: TWQGRLDQETTA*PVWESPPGRAP
Trigger: CGGGGCCCGGCCGGGTGGTGACTCCCACACGGGTCATGCTGTTGTCTCCTGATCCAGCCGGCCCTGCCAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358536.8
CDS GCA 72 bp GAGTCACCTGAACTCCAAGGCGCCTTGTTTCTCCCCTaGGCACCTGGCCCTGCCCACCGCCCCTGCTCACCG +
Preference number: 6 (lower is better)
Translates to: ESPELQGALFLP*APGPAHRPCSP
Trigger: CGGTGAGCAGGGGCGGTGGGCAGGGCCAGGTGCGCAGGGGAGAAACAAGGCGCCTTGGAGTTCAGGTGACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296440.11
CDS GCA 72 bp GGAGCCACCTGTGAGCAAGGGTTTGGCCCAGGTCAATaGCCAGCCCGGCCAGGGACCTGCCCACTGACCGTG +
Preference number: 6 (lower is better)
Translates to: GATCEQGFGPGQ*PARPGTCPLTV
Trigger: CACGGTCAGTGGGCAGGTCCCTGGCCGGGCTGGGCATTGACCTGGGCCAAACCCTTGCTCACAGGTGGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473996.1
CDS CAA 90 bp GCCAAGCCCTGGGCTACCAGCCCCACCGTGCTGACCGCAGGATCATaGGCAGCCACATATTGTGTGTCCCCAGGCCGCTCTGGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: AKPWATSPTVLTAGS*AATYCVSPGRSGRS
Trigger: GCTGCGGCCAGAGCGGCCTGGGGACACACAATATGTGGCTGCCAATGATCCTGCGGTCAGCACGGTGGGGCTGGTAGCCCAGGGCTTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS CAA 90 bp GCGGCCCACTGCCAGCTTGGCTGTCTCCTCATAGGAGAAGGCAGCTaGGGGGTCGGGCGGCCACAGGGCCCGGGTTGTGATGGGTGGAAT +
Preference number: 6 (lower is better)
Translates to: AAHCQLGCLLIGEGS*GVGRPQGPGCDGWN
Trigger: ATTCCACCCATCACAACCCGGGCCCTGTGGCCGCCCGACCCCCAAGCTGCCTTCTCCTATGAGGAGACAGCCAAGCTGGCAGTGGGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS CAA 90 bp AGGCCTGGGAGGGCAGGTGTGCGGCACGTGATGAGCTGGGAGGAGTaGACATGGCACGGCTCCTCAAACGTCTCCGGGACCACGCGACGC +
Preference number: 6 (lower is better)
Translates to: RPGRAGVRHVMSWEE*TWHGSSNVSGTTRR
Trigger: GCGTCGCGTGGTCCCGGAGACGTTTGAGGAGCCGTGCCATGTCAACTCCTCCCAGCTCATCACGTGCCGCACACCTGCCCTCCCAGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465117.5
CDS TCA 72 bp TCCCGCTCCACATGGACCGGCATCAACGTGGAGCCCTaGACGCTCTCCACACAGGGGCAGGAGCTTGCCCCC +
Preference number: 6 (lower is better)
Translates to: SRSTWTGINVEP*TLSTQGQELAP
Trigger: GGGGGCAAGCTCCTGCCCCTGTGTGGAGAGCGTTCAGGGCTCCACGTTGATGCCGGTCCATGTGGAGCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
ENST00000462738.1
ENST00000484485.5
CDS GCA 72 bp GGTGCTGCCAGACACACCAGTTACACCCCCAGCGGCTaGTCACACAGGCCTGGCACTGCGCAGATGGGCGGA +
Preference number: 6 (lower is better)
Translates to: GAARHTSYTPSG*SHRPGTAQMGG
Trigger: TCCGCCCATCTGCGCAGTGCCAGGCCTGTGTGAGCAGCCGCTGGGGGTGTAACTGGTGTGTCTGGCAGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
ENST00000466353.1
CDS CCA 72 bp CCCCTGGTGCACGCTCCCGCATACCACCAGGGCCCCTaGGCTCACCAGGAGCAGCTGATTCGGGTTGTTGGT +
Preference number: 6 (lower is better)
Translates to: PLVHAPAYHQGP*AHQEQLIRVVG
Trigger: ACCAACAACCCGAATCAGCTGCTCCTGGTGAGCCCAGGGGCCCTGGTGGTATGCGGGAGCGTGCACCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS CCA 72 bp GCGCTGGCCCCACGTGCAAAGGCACTCACGAAGTGGTaGCTGTACTCGGAGAGGCGGCCCACTGCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: ALAPRAKALTKW*LYSERRPTASL
Trigger: CAAGCTGGCAGTGGGCCGCCTCTCCGAGTACAGCCACCACTTCGTGAGTGCCTTTGCACGTGGGGCCAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS CCA 72 bp CCTGCAGGTCCCGCCGCAGGAACAGGAAGTAGGCGCTaGCCCCACGTGCAAAGGCACTCACGAAGTGGTGGC +
Preference number: 6 (lower is better)
Translates to: PAGPAAGTGSRR*PHVQRHSRSGG
Trigger: GCCACCACTTCGTGAGTGCCTTTGCACGTGGGGCCAGCGCCTACTTCCTGTTCCTGCGGCGGGACCTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS CCA 72 bp GTGTGGCTTCCAGCGGGACCCGGCTGGCCATGGGGCTaGGCGTGTGGTCTGAGCCACAGGGATAAGCATCCA +
Preference number: 6 (lower is better)
Translates to: VWLPAGPGWPWG*ACGLSHRDKHP
Trigger: TGGATGCTTATCCCTGTGGCTCAGACCACACGCCCAGCCCCATGGCCAGCCGGGTCCCGCTGGAAGCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
ENST00000473683.1
CDS CAA 72 bp TGGAGCCCTGAACGCTCTCCACACAGGGGCAGGAGCTaGCCCCCAAGGTCGCCTCTTCCAGCTCCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: WSPERSPHRGRS*PPRSPLPAPRA
Trigger: GGCTCTGGGAGCTGGAAGAGGCGACCTTGGGGGCAAGCTCCTGCCCCTGTGTGGAGAGCGTTCAGGGCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
ENST00000484485.5
CDS CAA 72 bp CTGCCTCCCAGCATCCTCCCCACCCTGAGTGATGAGTaGTCCCTGCAGAGTTGGTCCGGGGCCAGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: LPPSILPTLSDE*SLQSWSGASPG
Trigger: GCCTGGGCTGGCCCCGGACCAACTCTGCAGGGACAACTCATCACTCAGGGTGGGGAGGATGCTGGGAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470525.1
CDS TCA 72 bp AAGGGGCCCTGTCAGCCTGGTTGTGGGGCGAGCTGCTaGGCAAGTGAGTGGGCACAGCTAGCCGCCCATGTC +
Preference number: 6 (lower is better)
Translates to: KGPCQPGCGASC*ASEWAQLAAHV
Trigger: GACATGGGCGGCTAGCTGTGCCCACTCACTTGCTCAGCAGCTCGCCCCACAACCAGGCTGACAGGGCCCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464294.1
CDS TCA 72 bp CCTGCTCAGCCCCAGGGTCAGGAGAGGATGGCCAGATaGGTCCTACTCGCCCAGGCCTGCCTGACAATCCCC +
Preference number: 6 (lower is better)
Translates to: PAQPQGQERMAR*VLLAQACLTIP
Trigger: GGGGATTGTCAGGCAGGCCTGGGCGAGTAGGACTCATCTGGCCATCCTCTCCTGACCCTGGGGCTGAGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485535.5
CDS GCA 72 bp AGACAGCCCAGCTCAGGCTGGAAGCTCCATAGCCACTaGTCTGGGCCCTGGCCCCTCGAGCACTCAGAACGG +
Preference number: 6 (lower is better)
Translates to: RQPSSGWKLHSH*SGPWPLEHSER
Trigger: CCGTTCTGAGTGCTCGAGGGGCCAGGGCCCAGAGCAGTGGCTATGGAGCTTCCAGCCTGAGCTGGGCTGTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS GCA 72 bp GGCCCAGCATCACACGAGGCCTTGTGGGTGCACAGGTaGTGCCAGACACACCAGTTACACCCCCAGCGGCTG +
Preference number: 6 (lower is better)
Translates to: GPASHEALWVHR*CQTHQLHPQRL
Trigger: CAGCCGCTGGGGGTGTAACTGGTGTGTCTGGCAGCACCTGTGCACCCACAAGGCCTCGTGTGATGCTGGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
ENST00000466353.1
CDS GCA 72 bp GGCACACCCAGGTCCCGGTGCAAGGGCGACTCGCGGTaGCCAGGGAAGAAGATCCTCTCCGCATACACCTTG +
Preference number: 6 (lower is better)
Translates to: GTPRSRCKGDSR*PGKKILSAYTL
Trigger: CAAGGTGTATGCGGAGAGGATCTTCTTCCCTGGGCACCGCGAGTCGCCCTTGCACCGGGACCTGGGTGTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000456774.5
ENST00000461261.1
ENST00000485535.5
CDS GCA 72 bp GCACACGAGGCTGTAGGCACAGGGCAGGCTAGGGGGTaGCAGGCTGCATCAAGGGCCCCTCAAGCTTACCTG +
Preference number: 6 (lower is better)
Translates to: AHEAVGTGQARG*QAASRAPQAYL
Trigger: CAGGTAAGCTTGAGGGGCCCTTGATGCAGCCTGGCACCCCCTAGCCTGCCCTGTGCCTACAGCCTCGTGTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464294.1
CDS GCA 72 bp CAGGGGCAGGAGCTTGCCCCCAAGGTCGCCTCTTCCTaGAGGCACCAAGGGCAAGGCAGTCTATGGAGCCCA +
Preference number: 6 (lower is better)
Translates to: QGQELAPKVASS*RHQGQGSLWSP
Trigger: TGGGCTCCATAGACTGCCTTGCCCTTGGTGCCTGCAGGAAGAGGCGACCTTGGGGGCAAGCTCCTGCCCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462738.1
CDS GCA 72 bp CTGCCCACTGACCGTGAACTCAGGCAAAGAGTCAGGTaGCTCTCGGAGGGCATGGTGCCGTGGCAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: LPTDRELRQRVR*LSEGMVPWQGL
Trigger: CAGCCCCTGCCACGGCACCATGCCCTCCGAGAGGCACCTGACTCTTTGCCTGAGTTCACGGTCAGTGGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473996.1
CDS CCA 72 bp GAATTGGTGTGGCTTCCAGCGGGACCCGGCTGGCCATaGGGCTGGGCGTGTGGTCTGAGCCACAGGGATAAG +
Preference number: 6 (lower is better)
Translates to: ELVWLPAGPGWP*GWACGLSHRDK
Trigger: CTTATCCCTGTGGCTCAGACCACACGCCCAGCCCCATGGCCAGCCGGGTCCCGCTGGAAGCCACACCAATTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
ENST00000473683.1
CDS CCA 72 bp GGCTCCTCTCGGCAGCACTGGGGCCTCACTAGGGTCTaGGGAGGGGCACATCACACCAGAACCAGTCAGCAG +
Preference number: 6 (lower is better)
Translates to: GSSRQHWGLTRV*GGAHHTRTSQQ
Trigger: CTGCTGACTGGTTCTGGTGTGATGTGCCCCTCCCCAGACCCTAGTGAGGCCCCAGTGCTGCCGAGAGGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS CCA 72 bp TGGGAGGGGAGGGCTCCTCATGGAGAGGCGACCCTGTaGAGCCAGGGGAAGATATGGAGCCAGAACCTGCCC +
Preference number: 6 (lower is better)
Translates to: WEGRAPHGEATL*SQGKIWSQNLP
Trigger: GGGCAGGTTCTGGCTCCATATCTTCCCCTGGCTCCACAGGGTCGCCTCTCCATGAGGAGCCCTCCCCTCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296440.11
ENST00000358536.8
CDS CCA 72 bp GCCGGATTTCCCGCTCCACATGGACCGGCATCAACGTaGAGCCCTGAACGCTCTCCACACAGGGGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: AGFPAPHGPAST*SPERSPHRGRS
Trigger: GCTCCTGCCCCTGTGTGGAGAGCGTTCAGGGCTCCACGTTGATGCCGGTCCATGTGGAGCGGGAAATCCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
ENST00000462738.1
ENST00000484485.5
CDS CCA 72 bp CTCCCCACCCTGAGTGATGAGTTGTCCCTGCAGAGTTaGTCCGGGGCCAGCCCAGGCCCAACAGTGGCTCAG +
Preference number: 6 (lower is better)
Translates to: LPTLSDELSLQS*SGASPGPTVAQ
Trigger: CTGAGCCACTGTTGGGCCTGGGCTGGCCCCGGACCAACTCTGCAGGGACAACTCATCACTCAGGGTGGGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470525.1
CDS CCA 72 bp TCCATGGCCCAGGGACCCCAGGCCAGGTGTGCCAGATaGGGACAGAACAGGGTAGAGCAAGGGGGCCTCCTT +
Preference number: 6 (lower is better)
Translates to: SMAQGPQARCAR*GQNRVEQGGLL
Trigger: AAGGAGGCCCCCTTGCTCTACCCTGTTCTGTCCCCATCTGGCACACCTGGCCTGGGGTCCCTGGGCCATGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483753.1
CDS CAA 72 bp TGGAGCCCTGAACGCTCTCCACACAGGGGCAGGAGCTaGCCCCCAAGGTCGCCTCTTCCTGCAGGCACCAAG +
Preference number: 6 (lower is better)
Translates to: WSPERSPHRGRS*PPRSPLPAGTK
Trigger: CTTGGTGCCTGCAGGAAGAGGCGACCTTGGGGGCAAGCTCCTGCCCCTGTGTGGAGAGCGTTCAGGGCTCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462738.1
CDS CAA 90 bp TACCAGCCCCACCGTGCTGACCGCAGGATCATTGGCAGCCACATATaGTGTGTCCCCAGGCCGCTCTGGCCGCAGCAGCAGCTGCTCGAG +
Preference number: 6 (lower is better)
Translates to: YQPHRADRRIIGSHI*CVPRPLWPQQQLLE
Trigger: CTCGAGCAGCTGCTGCTGCGGCCAGAGCGGCCTGGGGACACACAATATGTGGCTGCCAATGATCCTGCGGTCAGCACGGTGGGGCTGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS CAA 90 bp GCATCAACGTGGAGCCCTGAACGCTCTCCACACAGGGGCAGGAGCTaGCCCCCAAGGTCGCCTCTTCCTGCAGGCACCAAGGGCAAGGCA +
Preference number: 6 (lower is better)
Translates to: ASTWSPERSPHRGRS*PPRSPLPAGTKGKA
Trigger: TGCCTTGCCCTTGGTGCCTGCAGGAAGAGGCGACCTTGGGGGCAAGCTCCTGCCCCTGTGTGGAGAGCGTTCAGGGCTCCACGTTGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462738.1
CDS TCA 72 bp ACCTGGCAGGGCCGGCTGGATCAGGAGACAACAGCATaGCCCGTGTGGGAGTCACCTGAACTCCAAGGCGCC +
Preference number: 6 (lower is better)
Translates to: TWQGRLDQETTA*PVWESPELQGA
Trigger: GGCGCCTTGGAGTTCAGGTGACTCCCACACGGGTCATGCTGTTGTCTCCTGATCCAGCCGGCCCTGCCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296440.11
CDS GCA 72 bp GGCACTCATCAGGCATCACAGGTGGCAGGCAGTCCCTaGTGTCTAGCACAGGGCCGGTGGACACTGTGGCCT +
Preference number: 6 (lower is better)
Translates to: GTHQASQVAGSP*CLAQGRWTLWP
Trigger: AGGCCACAGTGTCCACCGGCCCTGTGCTAGACAGCAGGGACTGCCTGCCACCTGTGATGCCTGATGAGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS GCA 72 bp CCGCCGCAGGAACAGGAAGTAGGCGCTGGCCCCACGTaGAAAGGCACTCACGAAGTGGTGGCTGTACTCGGA +
Preference number: 6 (lower is better)
Translates to: PPQEQEVGAGPT*KGTHEVVAVLG
Trigger: TCCGAGTACAGCCACCACTTCGTGAGTGCCTTTGCACGTGGGGCCAGCGCCTACTTCCTGTTCCTGCGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS GCA 72 bp CCAGCATCACACGAGGCCTTGTGGGTGCACAGGTGCTaGCAGACACACCAGTTACACCCCCAGCGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: PASHEALWVHRC*QTHQLHPQRLL
Trigger: GAGCAGCCGCTGGGGGTGTAACTGGTGTGTCTGGCAGCACCTGTGCACCCACAAGGCCTCGTGTGATGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
ENST00000466353.1
CDS CCA 72 bp GGTGGCTGTACTCGGAGAGGCGGCCCACTGCCAGCTTaGCTGTCTCCTCATAGGAGAAGGCAGCTTGGGGGT +
Preference number: 6 (lower is better)
Translates to: GGCTRRGGPLPA*LSPHRRRQLGG
Trigger: ACCCCCAAGCTGCCTTCTCCTATGAGGAGACAGCCAAGCTGGCAGTGGGCCGCCTCTCCGAGTACAGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS CCA 72 bp AGGCCTGGGAGGGCAGGTGTGCGGCACGTGATGAGCTaGGAGGAGTTGACATGGCACGGCTCCTCAAACGTC +
Preference number: 6 (lower is better)
Translates to: RPGRAGVRHVMS*EELTWHGSSNV
Trigger: GACGTTTGAGGAGCCGTGCCATGTCAACTCCTCCCAGCTCATCACGTGCCGCACACCTGCCCTCCCAGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465117.5
CDS CAA 72 bp CACCGTGCTGACCGCAGGATCATTGGCAGCCACATATaGTGTGTCCCCAGGCCGCTCTGGCCGCAGCAGCAG +
Preference number: 6 (lower is better)
Translates to: HRADRRIIGSHI*CVPRPLWPQQQ
Trigger: CTGCTGCTGCGGCCAGAGCGGCCTGGGGACACACAATATGTGGCTGCCAATGATCCTGCGGTCAGCACGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS CAA 72 bp AGGGCAGGTGTGCGGCACGTGATGAGCTGGGAGGAGTaGACATGGCACGGCTCCTCAAACGTCTCCGGGACC +
Preference number: 6 (lower is better)
Translates to: RAGVRHVMSWEE*TWHGSSNVSGT
Trigger: GGTCCCGGAGACGTTTGAGGAGCCGTGCCATGTCAACTCCTCCCAGCTCATCACGTGCCGCACACCTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465117.5
CDS TCA 72 bp CCCCTGCCAAGCCCTGGGCTACCAGCCCCACCGTGCTaGCCGCAGGATCATTGGCAGCCACATATTGTGTGT +
Preference number: 6 (lower is better)
Translates to: PLPSPGLPAPPC*PQDHWQPHIVC
Trigger: ACACACAATATGTGGCTGCCAATGATCCTGCGGTCAGCACGGTGGGGCTGGTAGCCCAGGGCTTGGCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS TCA 72 bp TGCATGGTGGCTGAGGGCTTAGAAGTTTGGAGGGCCTaGCCCTCCCTGGACAGGAGCCCTGTCCACCTCTGC +
Preference number: 6 (lower is better)
Translates to: CMVAEGLEVWRA*PSLDRSPVHLC
Trigger: GCAGAGGTGGACAGGGCTCCTGTCCAGGGAGGGTCAGGCCCTCCAAACTTCTAAGCCCTCAGCCACCATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461261.1
CDS GCA 72 bp CACGAAGTGGTGGCTGTACTCGGAGAGGCGGCCCACTaGCAGCTTGGCTGTCTCCTCATAGGAGAAGGCAGC +
Preference number: 6 (lower is better)
Translates to: HEVVAVLGEAAH*QLGCLLIGEGS
Trigger: GCTGCCTTCTCCTATGAGGAGACAGCCAAGCTGGCAGTGGGCCGCCTCTCCGAGTACAGCCACCACTTCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS GCA 72 bp CAACCATGGGCCCAGCATCACACGAGGCCTTGTGGGTaGACAGGTGCTGCCAGACACACCAGTTACACCCCC +
Preference number: 6 (lower is better)
Translates to: QPWAQHHTRPCG*TGAARHTSYTP
Trigger: GGGGGTGTAACTGGTGTGTCTGGCAGCACCTGTGCACCCACAAGGCCTCGTGTGATGCTGGGCCCATGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
ENST00000466353.1
CDS GCA 72 bp TTTGGCCCAGGTCAATGCCCAGCCCGGCCAGGGACCTaGCCACTGACCGTGAACTCAGGCAAAGAGTCAGGT +
Preference number: 6 (lower is better)
Translates to: FGPGQCPARPGT*PLTVNSGKESG
Trigger: ACCTGACTCTTTGCCTGAGTTCACGGTCAGTGGGCAGGTCCCTGGCCGGGCTGGGCATTGACCTGGGCCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473996.1
CDS CAA 72 bp TGGGCTACCAGCCCCACCGTGCTGACCGCAGGATCATaGGCAGCCACATATTGTGTGTCCCCAGGCCGCTCT +
Preference number: 6 (lower is better)
Translates to: WATSPTVLTAGS*AATYCVSPGRS
Trigger: AGAGCGGCCTGGGGACACACAATATGTGGCTGCCAATGATCCTGCGGTCAGCACGGTGGGGCTGGTAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS TCA 72 bp GAACAGGAAGTTGGTAGCCCCCAGGTAGAGGGTGCCTaGGGTGGGGTCCCTTGCCAGGTGCTGCAGATACGT +
Preference number: 6 (lower is better)
Translates to: EQEVGSPQVEGA*GGVPCQVLQIR
Trigger: ACGTATCTGCAGCACCTGGCAAGGGACCCCACCTCAGGCACCCTCTACCTGGGGGCTACCAACTTCCTGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS GCA 72 bp TGTGAAGGGGGAAGGACCGTTGTGGCAGGAGGCCTATaGCCAACCCAAGAAGCAGAGGGAGGCCTTACCCAG +
Preference number: 6 (lower is better)
Translates to: CEGGRTVVAGGL*PTQEAEGGLTQ
Trigger: CTGGGTAAGGCCTCCCTCTGCTTCTTGGGTTGGGCATAGGCCTCCTGCCACAACGGTCCTTCCCCCTTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497627.1
CDS CCA 72 bp GATGCTCTGTGTGGAGTATGGGTGGCCATCGCTCCCTaGGCCCAAGTAGACCCTGTGCAGCTGCCCTTGACT +
Preference number: 6 (lower is better)
Translates to: DALCGVWVAIAP*AQVDPVQLPLT
Trigger: AGTCAAGGGCAGCTGCACAGGGTCTACTTGGGCCCAGGGAGCGATGGCCACCCATACTCCACACAGAGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS CCA 72 bp CAGAACCTCAGAGGCAAGCTGCGGGTGGGGCAGGCATaGCCGATGAATGTGCTGGGGAGGCAGAAGAGAAGA +
Preference number: 6 (lower is better)
Translates to: QNLRGKLRVGQA*PMNVLGRQKRR
Trigger: TCTTCTCTTCTGCCTCCCCAGCACATTCATCGGCCATGCCTGCCCCACCCGCAGCTTGCCTCTGAGGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478171.1
CDS CCA 72 bp CTGCAAAGGGGCAGTGTGAAGGGGGAAGGACCGTTGTaGCAGGAGGCCTATGCCCAACCCAAGAAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: LQRGSVKGEGPL*QEAYAQPKKQR
Trigger: CCTCTGCTTCTTGGGTTGGGCATAGGCCTCCTGCCACAACGGTCCTTCCCCCTTCACACTGCCCCTTTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497627.1
CDS CAA 72 bp GTGGGGTCCCTTGCCAGGTGCTGCAGATACGTGCCATaGGGAGTGAATGCAGTTGGTGGAAGGGGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: VGSLARCCRYVP*GVNAVGGRGWR
Trigger: CCTCCAGCCCCTTCCACCAACTGCATTCACTCCCAATGGCACGTATCTGCAGCACCTGGCAAGGGACCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS CAA 72 bp TCCCTGCAAAGGGGCAGTGTGAAGGGGGAAGGACCGTaGTGGCAGGAGGCCTATGCCCAACCCAAGAAGCAG +
Preference number: 6 (lower is better)
Translates to: SLQRGSVKGEGP*WQEAYAQPKKQ
Trigger: CTGCTTCTTGGGTTGGGCATAGGCCTCCTGCCACAACGGTCCTTCCCCCTTCACACTGCCCCTTTGCAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000497627.1
CDS TCA 72 bp TCTGCTCTGGCACAAGTGTCCGAGCTGCATGGTGGCTaGGGGCTTAGAAGTTTGGAGGGCCTGACCCTCCCT +
Preference number: 6 (lower is better)
Translates to: SALAQVSELHGG*GLRSLEGLTLP
Trigger: AGGGAGGGTCAGGCCCTCCAAACTTCTAAGCCCTCAGCCACCATGCAGCTCGGACACTTGTGCCAGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461261.1
CDS GCA 72 bp CCACCCACAGTATGGGTCCCTGTGAGCAAGGCAAGATaGACAGTCCAGGTGCTGAGCACAGGAAGCCACAGG +
Preference number: 6 (lower is better)
Translates to: PPTVWVPVSKAR*TVQVLSTGSHR
Trigger: CCTGTGGCTTCCTGTGCTCAGCACCTGGACTGTGCATCTTGCCTTGCTCACAGGGACCCATACTGTGGGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS GCA 72 bp ACCTCAGAAGTGACATCCTCGTCAGAAAGAATGAGGTaGCCGGCCACCCCAGACCGCCACTCTGCAAGGGCA +
Preference number: 6 (lower is better)
Translates to: TSEVTSSSERMR*PATPDRHSARA
Trigger: TGCCCTTGCAGAGTGGCGGTCTGGGGTGGCCGGGCACCTCATTCTTTCTGACGAGGATGTCACTTCTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470525.1
CDS GCA 72 bp CACCCCGGCCTCATCCAGCACAGTCCAATGCAGCCATaGCAGCCAAGCTCAAGCCTAGCCCAGTACGATTCA +
Preference number: 6 (lower is better)
Translates to: HPGLIQHSPMQP*QPSSSLAQYDS
Trigger: TGAATCGTACTGGGCTAGGCTTGAGCTTGGCTGGCATGGCTGCATTGGACTGTGCTGGATGAGGCCGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473996.1
ENST00000485535.5
CDS CCA 72 bp ACTGCACCTGCCAAGGAGCACGCACCACCCACAGTATaGGTCCCTGTGAGCAAGGCAAGATGCACAGTCCAG +
Preference number: 6 (lower is better)
Translates to: TAPAKEHAPPTV*VPVSKARCTVQ
Trigger: CTGGACTGTGCATCTTGCCTTGCTCACAGGGACCCATACTGTGGGTGGTGCGTGCTCCTTGGCAGGTGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS CCA 72 bp CTTGCAACCATGGGCCCAGCATCACACGAGGCCTTGTaGGTGCACAGGTGCTGCCAGACACACCAGTTACAC +
Preference number: 6 (lower is better)
Translates to: LATMGPASHEAL*VHRCCQTHQLH
Trigger: GTGTAACTGGTGTGTCTGGCAGCACCTGTGCACCCACAAGGCCTCGTGTGATGCTGGGCCCATGGTTGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
ENST00000466353.1
CDS CCA 72 bp CCCAGACCGCCACTCAACATCAAGGGTGCGAGGGTCTaGCCGCTGGGTGAGAGGCACTCCTTTATAAAGCTG +
Preference number: 6 (lower is better)
Translates to: PRPPLNIKGARV*PLGERHSFIKL
Trigger: CAGCTTTATAAAGGAGTGCCTCTCACCCAGCGGCCAGACCCTCGCACCCTTGATGTTGAGTGGCGGTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000456774.5
ENST00000485535.5
CDS CAA 90 bp TCTGGCACTGATAGGAAAACCTCCCTCGTCTCCTCTCGGCTGATGTaGGCAGGACTCATGGCTGCCACTTGCAGACAGCCCAGCTCAGGC +
Preference number: 6 (lower is better)
Translates to: SGTDRKTSLVSSRLM*AGLMAATCRQPSSG
Trigger: GCCTGAGCTGGGCTGTCTGCAAGTGGCAGCCATGAGTCCTGCCAACATCAGCCGAGAGGAGACGAGGGAGGTTTTCCTATCAGTGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS TCA 72 bp GTATGGGTGGCCATCGCTCCCCTGTGCAGCTGCCCTTaGCTATCACCCAGGAAAGCGATGGTGTGTCCATCT +
Preference number: 6 (lower is better)
Translates to: VWVAIAPLCSCP*LSPRKAMVCPS
Trigger: AGATGGACACACCATCGCTTTCCTGGGTGATAGTCAAGGGCAGCTGCACAGGGGAGCGATGGCCACCCATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473683.1
CDS GCA 72 bp CCATCAAAGGTGAGGTCTCTGCTCACTGCAGACCCCTaGTGGATGCTCTGTGTGGAGTATGGGTGGCCATCG +
Preference number: 6 (lower is better)
Translates to: PSKVRSLLTADP*WMLCVEYGWPS
Trigger: CGATGGCCACCCATACTCCACACAGAGCATCCAGCAGGGGTCTGCAGTGAGCAGAGACCTCACCTTTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS GCA 72 bp CCTTTCCACCATCCGCTTGTACCGGGGAATGTCCCGTaGATACAGAAGTTTGTTGATCGGGGAGTCCCGGCC +
Preference number: 6 (lower is better)
Translates to: PFHHPLVPGNVP*IQKFVDRGVPA
Trigger: GGCCGGGACTCCCCGATCAACAAACTTCTGTATGCACGGGACATTCCCCGGTACAAGCGGATGGTGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000456774.5
ENST00000483676.1
ENST00000485535.5
ENST00000497627.1
CDS GCA 72 bp GATCCCACGACCTGCCCCAGCCCAGCCACATCTGGCTaGACCCACCTGTACATGAGGACAATGATGATGACA +
Preference number: 6 (lower is better)
Translates to: DPTTCPSPATSG*THLYMRTMMMT
Trigger: TGTCATCATCATTGTCCTCATGTACAGGTGGGTGCAGCCAGATGTGGCTGGGCTGGGGCAGGTCGTGGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473996.1
ENST00000485535.5
CDS CCA 72 bp TCAAAGGTGAGGTCTCTGCTCACTGCAGACCCCTGCTaGATGCTCTGTGTGGAGTATGGGTGGCCATCGCTC +
Preference number: 6 (lower is better)
Translates to: SKVRSLLTADPC*MLCVEYGWPSL
Trigger: GAGCGATGGCCACCCATACTCCACACAGAGCATCCAGCAGGGGTCTGCAGTGAGCAGAGACCTCACCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS CAA 72 bp GATAGGAAAACCTCCCTCGTCTCCTCTCGGCTGATGTaGGCAGGACTCATGGCTGCCACTTGCAGACAGCCC +
Preference number: 6 (lower is better)
Translates to: DRKTSLVSSRLM*AGLMAATCRQP
Trigger: GGGCTGTCTGCAAGTGGCAGCCATGAGTCCTGCCAACATCAGCCGAGAGGAGACGAGGGAGGTTTTCCTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS TCA 72 bp GCACTGATAGGAAAACCTCCCTCGTCTCCTCTCGGCTaGTGTTGGCAGGACTCATGGCTGCCACTTGCAGAC +
Preference number: 6 (lower is better)
Translates to: ALIGKPPSSPLG*CWQDSWLPLAD
Trigger: GTCTGCAAGTGGCAGCCATGAGTCCTGCCAACATCAGCCGAGAGGAGACGAGGGAGGTTTTCCTATCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS TCA 72 bp CACAGGCCTGGCACTGCGCAGATGGGCGGAGTTCAGTaGCCGCCACACAGTCATAGAAAGAGAGGGAAGTTT +
Preference number: 6 (lower is better)
Translates to: HRPGTAQMGGVQ*PPHSHRKRGKF
Trigger: AAACTTCCCTCTCTTTCTATGACTGTGTGGCGGTCACTGAACTCCGCCCATCTGCGCAGTGCCAGGCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
ENST00000466353.1
CDS TCA 72 bp AGAGGGAAGTTTTGGCGATCACAACAGCGCCAAATCTaGGCTCCACGCTCACGGATACGTAGTCACCCGGCC +
Preference number: 6 (lower is better)
Translates to: RGKFWRSQQRQI*APRSRIRSHPA
Trigger: GGCCGGGTGACTACGTATCCGTGAGCGTGGAGCTCAGATTTGGCGCTGTTGTGATCGCCAAAACTTCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466353.1
CDS GCA 72 bp ACCTCAGAAGTGACATCCTCGTCAGAAAGAATGAGGTaGCCGGCCACCCCAGACCGCCACTCAACATCAAGG +
Preference number: 6 (lower is better)
Translates to: TSEVTSSSERMR*PATPDRHSTSR
Trigger: CCTTGATGTTGAGTGGCGGTCTGGGGTGGCCGGGCACCTCATTCTTTCTGACGAGGATGTCACTTCTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000456774.5
ENST00000485535.5
CDS TCA 72 bp CCAGGGTGTCCACTGGCAGCTGTGCACAGTCAGAATTaGCATCATACTCGATGTAGGCCACCTCGGTCCCAT +
Preference number: 6 (lower is better)
Translates to: PGCPLAAVHSQN*HHTRCRPPRSH
Trigger: ATGGGACCGAGGTGGCCTACATCGAGTATGATGTCAATTCTGACTGTGCACAGCTGCCAGTGGACACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
ENST00000473683.1
CDS TCA 72 bp AGAGGGAAGTTTTGGCGATCACAACAGCGCCAAATCTaGGCTCCACGCTCACGGATACGTAGTCGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: RGKFWRSQQRQI*APRSRIRSRLL
Trigger: GAGGAGCCGACTACGTATCCGTGAGCGTGGAGCTCAGATTTGGCGCTGTTGTGATCGCCAAAACTTCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS GCA 72 bp GAGGATGTCAGTGAAATACTCAAGCTTCCCATGCAGTaGCACGGTGAGCAGAGATGCCACGTAGGCACGGTC +
Preference number: 6 (lower is better)
Translates to: EDVSEILKLPMQ*HGEQRCHVGTV
Trigger: GACCGTGCCTACGTGGCATCTCTGCTCACCGTGGCACTGCATGGGAAGCTTGAGTATTTCACTGACATCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000456774.5
ENST00000461261.1
ENST00000485535.5
CDS CCA 72 bp ACCCGGATTCTTGGCGTCTGTACCACGTCCAGATTCTaGCCACGGACGCATATCTCACGTCCTCCACTGAAA +
Preference number: 6 (lower is better)
Translates to: TRILGVCTTSRF*PRTHISRPPLK
Trigger: TTTCAGTGGAGGACGTGAGATATGCGTCCGTGGCCAGAATCTGGACGTGGTACAGACGCCAAGAATCCGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467913.1
CDS CAA 72 bp CTGAGCAGGCGGTTGTCGTTCAAGGTGTATTTGGCCTaGCCTGTCACACTGTCCACTGGCCCCTTATCCACT +
Preference number: 6 (lower is better)
Translates to: LSRRLSFKVYLA*PVTLSTGPLST
Trigger: AGTGGATAAGGGGCCAGTGGACAGTGTGACAGGCAAGGCCAAATACACCTTGAACGACAACCGCCTGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000456774.5
ENST00000461261.1
ENST00000470525.1
ENST00000485535.5
CDS TCA 72 bp CACATCACACCAGAACCAGTCAGCAGGGCAGGACTCTaGTGTTCCCCAAAGTGGCAGGAATATGACTCCCCT +
Preference number: 6 (lower is better)
Translates to: HITPEPVSRAGL*CSPKWQEYDSP
Trigger: AGGGGAGTCATATTCCTGCCACTTTGGGGAACATCAGAGTCCTGCCCTGCTGACTGGTTCTGGTGTGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000449094.5
ENST00000456774.5
CDS CAA 90 bp ACATCCTCTCTGAGCAGGCGGTTGTCGTTCAAGGTGTATTTGGCCTaGCCTGTCACACTGTCCACTGGCCCCTTATCCACTTGGTGCTTA +
Preference number: 6 (lower is better)
Translates to: TSSLSRRLSFKVYLA*PVTLSTGPLSTWCL
Trigger: TAAGCACCAAGTGGATAAGGGGCCAGTGGACAGTGTGACAGGCAAGGCCAAATACACCTTGAACGACAACCGCCTGCTCAGAGAGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000296440.11
ENST00000358536.8
ENST00000456774.5
ENST00000461261.1
ENST00000485535.5
CDS CCA 72 bp CCCAAACCACACGACCCCTTGCCCCTACTAGCAGCATaGGATTCTCAGTGCCTCAACATAAAGCCCTACAAA +
Preference number: 6 (lower is better)
Translates to: PKPHDPLPLLAA*DSQCLNIKPYK
Trigger: TTTGTAGGGCTTTATGTTGAGGCACTGAGAATCCCATGCTGCTAGTAGGGGCAAGGGGTCGTGTGGTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467913.1
CDS CCA 72 bp GAACACAGCCACTTTCATGTGTTTCCATGTCGTCCCTaGCTGCCTTTGTGCCACAGTGGCAAAGCTGAGTTG +
Preference number: 6 (lower is better)
Translates to: EHSHFHVFPCRP*LPLCHSGKAEL
Trigger: CAACTCAGCTTTGCCACTGTGGCACAAAGGCAGCCAGGGACGACATGGAAACACATGAAAGTGGCTGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473996.1
ENST00000485535.5
CDS TCA 72 bp GGCTGCCTTTGTGCCACAGTGGCAAAGCTGAGTTGTTaGACAGAGACCACTTGGCCTGCAAAGCGAAAATAT +
Preference number: 6 (lower is better)
Translates to: GCLCATVAKLSC*TETTWPAKRKY
Trigger: ATATTTTCGCTTTGCAGGCCAAGTGGTCTCTGTTCAACAACTCAGCTTTGCCACTGTGGCACAAAGGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473996.1
ENST00000485535.5
CDS GCA 72 bp TTTCATGTGTTTCCATGTCGTCCCTGGCTGCCTTTGTaGCACAGTGGCAAAGCTGAGTTGTTGAACAGAGAC +
Preference number: 6 (lower is better)
Translates to: FHVFPCRPWLPL*HSGKAELLNRD
Trigger: GTCTCTGTTCAACAACTCAGCTTTGCCACTGTGGCACAAAGGCAGCCAGGGACGACATGGAAACACATGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473996.1
ENST00000485535.5
CDS CAA 72 bp TGGCTGCCTTTGTGCCACAGTGGCAAAGCTGAGTTGTaGAACAGAGACCACTTGGCCTGCAAAGCGAAAATA +
Preference number: 6 (lower is better)
Translates to: WLPLCHSGKAEL*NRDHLACKAKI
Trigger: TATTTTCGCTTTGCAGGCCAAGTGGTCTCTGTTCAACAACTCAGCTTTGCCACTGTGGCACAAAGGCAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473996.1
ENST00000485535.5
CDS CCA 72 bp CCACTGAAACAGACCGTGAGCTTACGTAACGTAAGATaGCTTATGTTACCTGGACCTAAAGCACAGCCCAGT +
Preference number: 6 (lower is better)
Translates to: PLKQTVSLRNVR*LMLPGPKAQPS
Trigger: ACTGGGCTGTGCTTTAGGTCCAGGTAACATAAGCCATCTTACGTTACGTAAGCTCACGGTCTGTTTCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467913.1
CDS CCA 72 bp ATGCTCCATAAGATTGACAGAGACCCTCTCTCACTTTaGAGGGAATTCTTTATGACACATCAGAAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: MLHKIDRDPLSL*REFFMTHQKAL
Trigger: CAAGGCCTTCTGATGTGTCATAAAGAATTCCCTCCAAAGTGAGAGAGGGTCTCTGTCAATCTTATGGAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464294.1